1149 195 9 5 chr18 0 215 -85988719 - MER2 DNA MER2_type -129 216 1 23 33 0 0 chr18 479 509 -85988425 + AT_rich Low_complexity Low_complexity 1 30 0 2940 206 91 38 chr18 753 890 -85988044 - L1ME2 LINE L1 -9 6155 6027 782 163 32 0 chr18 890 1013 -85987921 + FLAM_C SINE Alu 1 127 -6 2940 206 91 38 chr18 1013 1051 -85987883 - L1ME2 LINE L1 -137 6027 5992 2242 97 3 16 chr18 1051 1362 -85987572 + AluSg SINE Alu 1 307 -3 2940 206 91 38 chr18 1362 2180 -85986754 - L1ME2 LINE L1 -172 5992 5108 1388 169 47 8 chr18 2356 2611 -85986323 - MER2 DNA MER2_type 0 345 81 215 173 19 0 chr18 2628 2680 -85986254 + CT-rich Low_complexity Low_complexity 2 54 0 251 186 0 0 chr18 2692 2735 -85986199 - MER2 DNA MER2_type -302 43 1 378 129 32 0 chr18 2736 2798 -85986136 - L1ME2 LINE L1 -1918 4228 4165 * 3681 171 64 31 chr18 2789 3554 -85985380 - L1MD2 LINE L1 -232 6127 5338 22 35 0 0 chr18 4224 4253 -85984681 + AT_rich Low_complexity Low_complexity 1 29 0 2159 94 3 14 chr18 4263 4550 -85984384 - AluSx SINE Alu -28 284 1 2929 42 0 0 chr18 5711 6042 -85982892 - L1PA7 LINE L1 -2 6152 5822 2251 105 10 10 chr18 6049 6355 -85982579 - AluSx SINE Alu -6 306 1 324 0 0 0 chr18 6427 6463 -85982471 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 2150 106 0 0 chr18 6463 6746 -85982188 - AluSx SINE Alu -28 284 2 314 276 35 76 chr18 6785 6930 -85982004 - MIR SINE MIR -110 152 14 1876 189 122 19 chr18 9166 9584 -85979350 + LTR40b LTR ERVL 1 461 -1 266 321 12 0 chr18 10058 10072 -85978862 - LTR67 LTR ERVL -377 180 103 282 191 32 32 chr18 10072 10135 -85978799 - MLT1J LTR MaLR -350 161 99 619 218 295 3 chr18 10413 10711 -85978223 - L1MD2 LINE L1 -1113 5033 4649 2527 60 0 7 chr18 10711 11011 -85977923 - AluSq SINE Alu -15 298 1 234 286 36 0 chr18 11035 11119 -85977815 + L1 LINE L1 4423 4509 -1637 331 207 232 0 chr18 11200 11282 -85977652 - AluJ/FLAM SINE Alu -201 101 1 2243 67 0 14 chr18 11999 12282 -85976652 + AluY SINE Alu 1 279 -32 216 0 0 0 chr18 12282 12306 -85976628 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 2252 104 10 0 chr18 12408 12706 -85976228 - AluSq SINE Alu -12 301 1 1620 155 48 10 chr18 13067 13357 -85975577 + AluJb SINE Alu 1 301 -11 2016 145 7 10 chr18 14454 14764 -85974170 - AluJb SINE Alu -3 309 1 322 307 202 5 chr18 15086 15304 -85973630 + L1M4 LINE L1 4016 4276 -1870 1879 187 79 15 chr18 15400 15742 -85973192 - THE1B LTR MaLR 0 364 1 12202 80 33 7 chr18 15742 15798 -85973136 - THE1B-int LTR MaLR 0 1580 1527 2111 152 0 0 chr18 15798 16108 -85972826 + AluSx SINE Alu 1 310 -2 12202 80 33 7 chr18 16108 17591 -85971343 - THE1B-int LTR MaLR -53 1527 1 2191 137 76 15 chr18 17591 17933 -85971001 - THE1B LTR MaLR 0 364 2 1686 160 0 4 chr18 17933 18195 -85970739 - AluJb SINE Alu -31 281 21 251 278 171 0 chr18 18195 18377 -85970557 + MER102b DNA MER1_type 77 309 -32 1988 127 11 0 chr18 18683 18966 -85969968 + AluSx SINE Alu 1 286 -26 229 284 79 16 chr18 19123 19250 -85969684 + L1ME LINE L1 5576 5710 -411 2465 69 30 0 chr18 19596 19899 -85969035 + AluSx SINE Alu 1 312 0 2377 42 0 17 chr18 20172 20516 -85968418 + AluY SINE Alu 1 339 0 510 329 35 10 chr18 20729 21018 -85967916 - HAL1 LINE L1 -857 1650 1355 22 0 0 0 chr18 21085 21107 -85967827 + AT_rich Low_complexity Low_complexity 1 22 0 914 146 0 7 chr18 21111 21248 -85967686 - AluJb SINE Alu -176 136 1 26 50 0 0 chr18 21259 21299 -85967635 + AT_rich Low_complexity Low_complexity 1 40 0 2235 129 0 3 chr18 21345 21656 -85967278 - AluJb SINE Alu -2 310 1 363 238 60 36 chr18 21664 21916 -85967018 - L1MEd LINE L1 -5016 1103 846 1179 215 33 102 chr18 21975 22492 -85966442 - L1MD3 LINE L1 -7 8035 7564 233 266 38 0 chr18 22535 22614 -85966320 - L1MC5 LINE L1 -74 7887 7806 394 264 45 94 chr18 22831 22932 -85966002 - L1MC5 LINE L1 -373 7588 7484 2058 105 28 11 chr18 22932 23218 -85965716 - AluSx SINE Alu -20 292 2 394 264 45 94 chr18 23218 23519 -85965415 - L1MC5 LINE L1 -477 7484 7261 3653 97 57 38 chr18 23588 23891 -85965043 - MER4B LTR ERV1 0 610 289 2324 94 3 0 chr18 23891 24189 -85964745 + AluSp SINE Alu 1 299 -14 3653 97 57 38 chr18 24189 24460 -85964474 - MER4B LTR ERV1 -321 289 25 336 24 0 0 chr18 24815 24856 -85964078 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 2131 107 0 0 chr18 24856 25136 -85963798 - AluSx SINE Alu -32 280 1 468 35 0 0 chr18 25246 25304 -85963630 + (TG)n Simple_repeat Simple_repeat 2 59 0 3634 167 17 0 chr18 25306 25910 -85963024 - LTR31 LTR ERV1 -5 614 1 2857 141 32 44 chr18 26007 26184 -85962750 - L1MC1 LINE L1 -6 6327 6149 1715 176 14 0 chr18 26184 26480 -85962454 - AluJb SINE Alu -12 300 1 2857 141 32 44 chr18 26480 26766 -85962168 - L1MC1 LINE L1 -184 6149 5868 1952 129 82 38 chr18 26766 27106 -85961828 + THE1A LTR MaLR 1 355 0 2857 141 32 44 chr18 27106 27167 -85961767 - L1MC1 LINE L1 -465 5868 5808 606 190 8 0 chr18 27214 27335 -85961599 - MLT2B1 LTR ERVL -398 122 1 769 223 0 0 chr18 27408 27538 -85961396 + FLAM_A SINE Alu 1 130 -3 24 0 0 0 chr18 27700 27724 -85961210 + AT_rich Low_complexity Low_complexity 1 24 0 2052 142 0 0 chr18 27839 28128 -85960806 + AluSx SINE Alu 1 289 -23 2265 117 0 0 chr18 28278 28577 -85960357 - AluSx SINE Alu -13 299 1 1832 141 0 35 chr18 28884 29202 -85959732 - AluJb SINE Alu 0 310 3 28 38 0 19 chr18 29264 29283 -85959651 + AT_rich Low_complexity Low_complexity 1 19 -33 2153 95 32 0 chr18 29283 29566 -85959368 + AluSx SINE Alu 3 294 -18 28 38 0 19 chr18 29566 29599 -85959335 + AT_rich Low_complexity Low_complexity 19 52 0 655 111 0 0 chr18 29990 30071 -85958863 + AluS SINE Alu 2 82 -230 279 54 0 0 chr18 30096 30133 -85958801 + (TC)n Simple_repeat Simple_repeat 2 38 0 1611 89 122 0 chr18 30143 30389 -85958545 - AluSx SINE Alu -36 276 1 671 257 133 30 chr18 30654 31096 -85957838 + MLT1K LTR MaLR 79 578 -10 491 191 56 0 chr18 31367 31456 -85957478 - FRAM/FAM SINE Alu -87 89 1 237 339 54 18 chr18 31469 31581 -85957353 + MIR3 SINE MIR 93 208 0 1259 301 15 3 chr18 31788 32123 -85956811 + MLT1I LTR MaLR 64 402 -7 813 110 197 0 chr18 32766 32893 -85956041 - AluSx SINE Alu -13 297 146 740 124 0 0 chr18 32894 32991 -85955943 - AluSx SINE Alu -214 98 2 405 113 0 0 chr18 33219 33281 -85955653 - Alu SINE Alu -1 310 249 982 120 0 28 chr18 33281 33423 -85955511 - AluSx SINE Alu -174 138 1 682 273 23 0 chr18 33478 33650 -85955284 - MLT2E LTR ERVL -452 176 1 335 190 330 0 chr18 33921 34021 -85954913 - MER94 DNA DNA -1 133 1 276 30 0 0 chr18 34197 34230 -85954704 + (T)n Simple_repeat Simple_repeat 1 33 0 6023 281 44 15 chr18 34532 36116 -85952818 - MER41D-int LTR ERV1 -1593 6163 4515 2559 117 5 57 chr18 36116 36291 -85952643 + THE1B LTR MaLR 1 147 -217 1904 123 4 0 chr18 36291 36559 -85952375 - AluSx SINE Alu -21 291 23 2559 117 5 57 chr18 36559 36767 -85952167 + THE1B LTR MaLR 147 364 0 6023 281 44 15 chr18 36767 37050 -85951884 - MER41D-int LTR ERV1 -3241 4515 4242 250 240 115 10 chr18 37183 37279 -85951655 - MER41D-int LTR ERV1 -5566 380 275 766 293 0 0 chr18 37523 37697 -85951237 - MER41D LTR ERV1 0 557 384 22 0 0 0 chr18 38296 38318 -85950616 + AT_rich Low_complexity Low_complexity 1 22 0 1960 151 3 0 chr18 38326 38611 -85950323 - AluSx SINE Alu -26 286 1 708 165 105 0 chr18 38936 39069 -85949865 + MER4B LTR ERV1 4 150 -460 3638 120 38 12 chr18 39090 39667 -85949267 - L1MA2 LINE L1 -2 6302 5711 1244 153 31 0 chr18 39667 39896 -85949038 - L1MA2 LINE L1 -809 5496 5261 1952 124 69 33 chr18 39896 39960 -85948974 - THE1C LTR MaLR 0 428 368 2100 114 0 0 chr18 39960 40240 -85948694 - AluSg1 SINE Alu -28 281 2 1952 124 69 33 chr18 40240 40567 -85948367 - THE1C LTR MaLR -60 368 1 10124 224 54 17 chr18 40573 41558 -85947376 - L1 LINE L1 -887 6678 5731 1976 207 59 10 chr18 41558 41964 -85946970 - MSTA LTR MaLR -2 426 1 8022 211 30 23 chr18 41964 43602 -85945332 - MSTA-int LTR MaLR 0 1651 1 2072 191 64 17 chr18 43602 44011 -85944923 - MSTA LTR MaLR 0 428 1 10124 224 54 17 chr18 44011 44382 -85944552 - L1 LINE L1 -1834 5731 5375 2196 130 0 0 chr18 44382 44682 -85944252 - AluSx SINE Alu -12 300 1 10124 224 54 17 chr18 44682 47261 -85941673 - L1 LINE L1 -2190 5375 2457 2263 94 7 10 chr18 47261 47559 -85941375 - AluY SINE Alu -14 297 1 10124 224 54 17 chr18 47559 48453 -85940481 - L1 LINE L1 -5108 2457 1597 1158 78 0 17 chr18 48453 48632 -85940302 + (CCCTAA)n Simple_repeat Simple_repeat 1 176 0 212 83 0 28 chr18 48640 48676 -85940258 + (CCCCAA)n Simple_repeat Simple_repeat 5 39 0 856 110 6 43 chr18 48694 49039 -85939895 + (CCCTAA)n Simple_repeat Simple_repeat 1 332 0 1655 183 3 3 chr18 49281 49570 -85939364 + AluSx SINE Alu 1 289 -23 994 301 55 33 chr18 49791 49857 -85939077 + L1M4 LINE L1 3677 3740 -2406 2209 116 0 10 chr18 49857 50160 -85938774 + AluSq SINE Alu 1 300 -13 994 301 55 33 chr18 50160 50785 -85938149 + L1M4 LINE L1 3740 4383 -1763 618 226 17 0 chr18 50785 50900 -85938034 + AluJo/FLAM SINE Alu 1 117 -185 1447 248 0 0 chr18 50789 51087 -85937847 + AluJb SINE Alu 5 302 -10 1748 174 3 3 chr18 51108 51407 -85937527 + AluJo SINE Alu 1 299 -13 1291 252 15 36 chr18 51409 51818 -85937116 - L1M4 LINE L1 -1293 4853 4454 2233 108 3 16 chr18 51818 52134 -85936800 - AluSx SINE Alu 0 312 1 1291 252 15 36 chr18 52134 52193 -85936741 - L1M4 LINE L1 -1692 4454 4395 949 204 20 5 chr18 52195 52391 -85936543 - AluJo SINE Alu -24 288 90 283 0 0 0 chr18 52414 52446 -85936488 - MER31-int LTR ERV1 -3839 1097 1066 695 123 0 0 chr18 52450 52556 -85936378 + MLT2B3 LTR ERVL 1 106 -448 251 217 60 36 chr18 53011 53094 -85935840 - L1MC4 LINE L1 -2 8040 7956 1218 169 149 4 chr18 54049 54291 -85934643 + AluJb SINE Alu 1 277 -35 589 213 69 31 chr18 54302 54462 -85934472 + LTR35 LTR ERV1 453 618 0 21 0 0 0 chr18 54509 54530 -85934404 + AT_rich Low_complexity Low_complexity 1 21 0 1972 137 9 19 chr18 54713 55028 -85933906 + AluSx SINE Alu 1 312 0 1996 141 3 10 chr18 55193 55498 -85933436 + AluSx SINE Alu 5 307 -5 1966 106 46 7 chr18 55506 55789 -85933145 + AluSp SINE Alu 1 294 -19 1698 146 64 11 chr18 55804 56084 -85932850 + AluJb SINE Alu 1 295 -17 1915 162 3 9 chr18 56104 56419 -85932515 + AluSq SINE Alu 1 313 0 957 123 0 0 chr18 56550 56729 -85932205 + (CA)n Simple_repeat Simple_repeat 2 180 0 183 272 0 0 chr18 59394 59486 -85929448 + (CA)n Simple_repeat Simple_repeat 1 92 0 403 321 15 4 chr18 60430 60692 -85928242 + (CA)n Simple_repeat Simple_repeat 1 265 0 473 286 11 11 chr18 60708 60886 -85928048 + (CA)n Simple_repeat Simple_repeat 1 178 0 269 236 55 73 chr18 62909 63019 -85925915 - MIR SINE MIR -74 188 81 2199 88 7 7 chr18 63032 63348 -85925586 - AluSx SINE Alu 0 316 1 227 167 111 0 chr18 64490 64544 -85924390 - MIR SINE MIR -61 147 88 1038 151 13 0 chr18 65190 65349 -85923585 + AluJb SINE Alu 133 293 -19 1096 160 37 126 chr18 65352 65551 -85923383 + Cheshire DNA MER1_type 1065 1225 -1195 2118 120 0 24 chr18 65551 65669 -85923265 - AluSx SINE Alu -25 287 168 4425 174 29 41 chr18 65669 66650 -85922284 - LTR5 LTR ERVK 0 969 1 2118 120 0 24 chr18 66650 66822 -85922112 - AluSx SINE Alu -144 168 4 1096 160 37 126 chr18 66822 66947 -85921987 + Cheshire DNA MER1_type 1225 1360 -1060 828 140 129 22 chr18 66943 67121 -85921813 + Cheshire DNA MER1_type 2108 2304 -116 * 1214 154 14 28 chr18 67186 67400 -85921534 + AluJb SINE Alu 85 295 -17 369 226 202 0 chr18 67449 67573 -85921361 - MIR SINE MIR -89 173 25 2263 113 3 0 chr18 67812 68114 -85920820 + AluSx SINE Alu 1 303 -9 507 151 12 12 chr18 68136 68222 -85920712 + FLAM_A SINE Alu 31 116 -26 2201 113 0 7 chr18 68381 68681 -85920253 + AluSx SINE Alu 2 299 -13 2235 85 10 10 chr18 69043 69336 -85919598 + AluY SINE Alu 1 293 -18 715 152 0 0 chr18 69859 69971 -85918963 - AluSg/x SINE Alu -12 298 187 777 97 6 29 chr18 69971 70146 -85918788 + (CCCTAA)n Simple_repeat Simple_repeat 5 175 0 2207 113 3 0 chr18 70187 70489 -85918445 + AluSx SINE Alu 1 303 -9 331 172 0 0 chr18 72587 72645 -85916289 + L1PB1 LINE L1 989 1046 -5817 11203 210 31 35 chr18 72649 77967 -85910967 + L1PB1 LINE L1 1094 6507 -360 345 151 0 0 chr18 77967 78053 -85910881 + (TA)n Simple_repeat Simple_repeat 1 86 0 2103 173 5 8 chr18 78054 78424 -85910510 + L1PB1 LINE L1 6499 6867 0 6698 120 26 3 chr18 78438 79545 -85909389 + L1MA1 LINE L1 5172 6302 0 244 269 96 0 chr18 79640 79744 -85909190 - MER53 DNA DNA -71 118 5 21 0 0 0 chr18 80164 80185 -85908749 + AT_rich Low_complexity Low_complexity 1 21 0 1430 210 7 0 chr18 80891 81167 -85907767 + AluJo SINE Alu 1 278 -34 2142 112 3 3 chr18 81402 81696 -85907238 - AluSg1 SINE Alu -15 294 1 21 57 0 0 chr18 82187 82222 -85906712 + AT_rich Low_complexity Low_complexity 1 35 0 5145 237 38 51 chr18 82627 84482 -85904452 + L1P3 LINE L1 10 1825 -4626 10079 119 55 16 chr18 84484 86547 -85902387 + L1PA7 LINE L1 3784 5900 -254 2183 137 0 3 chr18 86547 86861 -85902073 + AluSp SINE Alu 1 313 0 10079 119 55 16 chr18 86861 87121 -85901813 + L1PA7 LINE L1 5900 6149 -5 6005 244 61 25 chr18 88427 90651 -85898283 + L1MB3 LINE L1 2898 5200 -946 * 43057 38 22 2 chr18 90647 96703 -85892231 + L1PA3 LINE L1 13 6196 0 3324 182 103 33 chr18 96711 97580 -85891354 + L1MB3 LINE L1 5185 6108 -75 243 246 64 59 chr18 97627 97881 -85891053 - L1M LINE L1 -788 5358 5128 656 208 44 0 chr18 97894 98053 -85890881 + L1MB4 LINE L1 6013 6178 -2 210 150 0 0 chr18 102233 102273 -85886661 + (TCC)n Simple_repeat Simple_repeat 2 41 0 234 128 0 0 chr18 104026 104065 -85884869 + (A)n Simple_repeat Simple_repeat 1 39 0 412 152 0 13 chr18 104374 104453 -85884481 - AluJ/FRAM SINE Alu -3 309 232 2275 68 10 10 chr18 104529 104837 -85884097 + AluSp SINE Alu 1 308 -5 2148 76 7 7 chr18 105548 105839 -85883095 + AluSc SINE Alu 15 305 -4 228 140 105 0 chr18 105849 105906 -85883028 + GA-rich Low_complexity Low_complexity 3 65 0 1353 159 21 87 chr18 105921 106046 -85882888 + AluJo SINE Alu 1 133 -179 2142 97 0 26 chr18 106046 106357 -85882577 - AluSq SINE Alu -10 303 1 1353 159 21 87 chr18 106357 106554 -85882380 + AluJo SINE Alu 133 303 -9 2301 99 0 0 chr18 106554 106866 -85882068 + AluSx SINE Alu 1 312 0 368 186 14 0 chr18 106909 106979 -85881955 - AluJ/FRAM SINE Alu 0 302 232 2112 84 10 3 chr18 107054 107351 -85881583 + AluSq SINE Alu 1 299 -14 2226 81 3 3 chr18 108017 108314 -85880620 + AluSx SINE Alu 15 311 -1 318 253 48 64 chr18 108320 108344 -85880590 + L1M4 LINE L1 4305 4328 -1818 1330 212 26 30 chr18 108344 108522 -85880412 - AluJb SINE Alu -1 301 123 192 48 71 0 chr18 108522 108564 -85880370 + T-rich Low_complexity Low_complexity 2 46 0 1330 212 26 30 chr18 108564 108687 -85880247 - AluJb SINE Alu -179 123 1 318 253 48 64 chr18 108687 108911 -85880023 + L1M4 LINE L1 4328 4549 -1597 1617 244 87 7 chr18 108914 109500 -85879434 + L1M4 LINE L1 4740 5372 -774 1867 150 3 0 chr18 109504 109798 -85879136 + AluSx SINE Alu 3 297 -15 298 220 132 33 chr18 109810 109895 -85879039 + MLT1C LTR MaLR 278 371 -134 350 239 80 35 chr18 109895 110008 -85878926 + LTR35 LTR ERV1 1 118 -500 346 253 11 11 chr18 110135 110226 -85878708 + LTR58 LTR ERV1 350 440 -239 490 250 52 0 chr18 110386 110502 -85878432 + LTR35 LTR ERV1 495 616 -2 619 159 44 9 chr18 110504 110617 -85878317 + MLT1C LTR MaLR 351 467 0 1146 38 0 0 chr18 112762 112894 -85876040 - AluY SINE Alu -179 132 1 2101 77 7 27 chr18 113081 113380 -85875554 + AluY SINE Alu 1 293 -18 1755 116 109 7 chr18 113400 113675 -85875259 + AluSg SINE Alu 1 303 -7 21 0 0 0 chr18 113703 113724 -85875210 + AT_rich Low_complexity Low_complexity 1 21 0 1150 228 16 20 chr18 113857 114376 -85874558 + TAR1 Satellite telomeric 1 516 -1345 1056 235 28 11 chr18 114393 114678 -85874256 + TAR1 Satellite telomeric 1759 2048 -63 338 216 18 63 chr18 115716 115827 -85873107 - MIR SINE MIR -85 123 18 2259 125 27 54 chr18 115985 116393 -85872541 - TAR1 Satellite telomeric -1711 400 4 1137 165 96 120 chr18 116247 116654 -85872280 - LTR60 LTR ERV1 -39 547 151 * 222 200 36 18 chr18 116698 116753 -85872181 + (CCCTAA)n Simple_repeat Simple_repeat 2 57 0 312 48 0 0 chr18 116824 116866 -85872068 + (CCCTAA)n Simple_repeat Simple_repeat 1 42 0 657 141 8 39 chr18 117007 117135 -85871799 + MER4A LTR ERV1 1 124 -540 * 1563 166 8 35 chr18 117106 117461 -85871473 + MER4A LTR ERV1 261 664 0 312 272 0 17 chr18 118156 118336 -85870598 + (CCCTAA)n Simple_repeat Simple_repeat 3 179 0 639 297 58 82 chr18 118583 119000 -85869934 + MLT1I LTR MaLR 3 409 0 24 53 0 0 chr18 120139 120177 -85868757 + AT_rich Low_complexity Low_complexity 1 38 0 206 188 38 25 chr18 121116 121196 -85867738 + (CAAA)n Simple_repeat Simple_repeat 2 82 0 264 103 52 0 chr18 121364 121422 -85867512 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 816 279 18 0 chr18 121552 121771 -85867163 + MER58A DNA MER1_type 2 224 0 2262 86 0 3 chr18 121788 122091 -85866843 + AluY SINE Alu 1 302 -9 190 389 49 23 chr18 122180 122486 -85866448 + L2 LINE L2 2831 3144 -128 322 308 74 17 chr18 122804 122991 -85865943 + MIR SINE MIR 55 256 -6 22 35 0 0 chr18 123219 123248 -85865686 + AT_rich Low_complexity Low_complexity 1 29 0 1252 52 7 18 chr18 123266 123537 -85865397 + (CCCTAA)n Simple_repeat Simple_repeat 1 268 0 229 118 0 0 chr18 123538 123572 -85865362 - TAR1 Satellite telomeric 0 2111 2078 872 118 0 6 chr18 123574 123743 -85865191 + (CCCTAA)n Simple_repeat Simple_repeat 5 172 0 1096 100 3 6 chr18 123746 129718 -85859216 - BSR/Beta Satellite Satellite 0 5950 1 932 199 112 17 chr18 130411 130652 -85858282 + L1MB7 LINE L1 5867 6130 -54 625 228 27 0 chr18 130690 130839 -85858095 + L1ME1 LINE L1 6009 6161 -5 1597 169 18 3 chr18 130978 131262 -85857672 + AluJb SINE Alu 1 288 -24 252 0 0 0 chr18 131265 131293 -85857641 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 930 196 0 0 chr18 131857 132030 -85856904 - FRAM SINE Alu -6 170 1 448 260 237 33 chr18 132077 132381 -85856553 + L1 LINE L1 4335 4700 -1446 398 279 213 35 chr18 132413 132789 -85856145 + L1 LINE L1 4885 5327 -819 698 220 0 0 chr18 132851 132983 -85855951 + FLAM_A SINE Alu 1 132 -1 32 43 0 0 chr18 133022 133068 -85855866 + AT_rich Low_complexity Low_complexity 1 46 0 3792 224 129 70 chr18 133071 134230 -85854704 + L1M4 LINE L1 3140 4229 -1917 1795 149 10 13 chr18 134230 134531 -85854403 + AluJb SINE Alu 1 300 -12 969 180 31 0 chr18 134534 134695 -85854239 + AluJo/FRAM SINE Alu 137 302 0 3792 224 129 70 chr18 134695 134736 -85854198 + L1M4 LINE L1 4230 4267 -1879 2059 125 7 0 chr18 134736 135040 -85853894 + AluSx SINE Alu 1 306 -6 3792 224 129 70 chr18 135040 135576 -85853358 + L1M4 LINE L1 4267 4770 -1376 2048 76 10 47 chr18 135576 135877 -85853057 + AluSp SINE Alu 1 290 -23 3792 224 129 70 chr18 135877 135888 -85853046 + L1M4 LINE L1 4770 4779 -1367 2295 56 3 13 chr18 135888 136191 -85852743 + AluY SINE Alu 1 300 -11 3792 224 129 70 chr18 136191 136363 -85852571 + L1M4 LINE L1 4779 5180 -966 13433 142 51 19 chr18 136383 137035 -85851899 - Tigger1 DNA MER2_type 0 2418 1788 1835 168 10 0 chr18 137035 137339 -85851595 - AluJo SINE Alu -5 307 1 13433 142 51 19 chr18 137339 138241 -85850693 - Tigger1 DNA MER2_type -630 1788 916 207 0 0 0 chr18 138241 138264 -85850670 + (TA)n Simple_repeat Simple_repeat 1 23 0 1988 97 20 17 chr18 138266 138565 -85850369 - L1PA10 LINE L1 -10 6158 5859 13433 142 51 19 chr18 138565 138951 -85849983 - Tigger1 DNA MER2_type -1502 916 544 1950 105 11 14 chr18 138951 139266 -85849668 - AluSx SINE Alu 0 314 1 13433 142 51 19 chr18 139266 139643 -85849291 - Tigger1 DNA MER2_type -1874 544 22 302 242 0 0 chr18 139658 139724 -85849210 + Charlie1 DNA MER1_type 2694 2759 -2 226 250 88 37 chr18 139726 139862 -85849072 + L1 LINE L1 3808 3950 -2196 1671 103 4 0 chr18 140022 140254 -85848680 - AluSx SINE Alu -79 233 1 1975 131 3 10 chr18 140487 140800 -85848134 - AluJb SINE Alu 0 312 2 229 211 0 19 chr18 140840 140892 -85848042 + L2 LINE L2 3263 3313 0 1558 175 18 0 chr18 140907 141187 -85847747 - AluJb SINE Alu -16 296 12 264 122 0 0 chr18 141190 141231 -85847703 + (TCC)n Simple_repeat Simple_repeat 3 43 0 1688 172 16 3 chr18 141235 141543 -85847391 - AluSx SINE Alu 0 312 1 374 267 109 36 chr18 141649 141814 -85847120 - L2 LINE L2 -3 3310 3134 1978 107 0 57 chr18 141904 142221 -85846713 + AluSx SINE Alu 14 312 0 1387 186 54 11 chr18 142507 142663 -85846271 - AluJo SINE Alu -21 291 116 261 0 0 0 chr18 142663 142692 -85846242 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1387 186 54 11 chr18 142692 142814 -85846120 - AluJo SINE Alu -196 116 1 271 256 33 74 chr18 143093 143214 -85845720 - MIR SINE MIR -58 204 89 484 312 49 49 chr18 143263 143529 -85845405 + MLT1J LTR MaLR 3 268 -243 305 258 274 16 chr18 143607 143731 -85845203 + MER5A DNA MER1_type 34 189 0 1964 113 3 3 chr18 143854 144181 -85844753 + AluSp SINE Alu 1 327 0 1519 162 14 41 chr18 144307 144597 -85844337 - AluJo SINE Alu -30 282 1 476 156 11 0 chr18 144651 144741 -85844193 + (TG)n Simple_repeat Simple_repeat 2 92 0 2017 109 11 0 chr18 144767 145052 -85843882 - AluSx SINE Alu -23 289 2 1960 138 0 3 chr18 145085 145389 -85843545 - AluSx SINE Alu -7 305 3 2082 186 72 39 chr18 145514 145834 -85843100 + MLT1D LTR MaLR 3 346 -159 2142 109 3 0 chr18 145834 146136 -85842798 + AluSx SINE Alu 1 303 -9 2082 186 72 39 chr18 146136 146298 -85842636 + MLT1D LTR MaLR 346 501 -4 1801 161 10 3 chr18 147016 147326 -85841608 + AluSx SINE Alu 1 312 0 1734 172 3 3 chr18 147457 147765 -85841169 - AluJb SINE Alu -2 310 3 276 253 157 0 chr18 147925 148008 -85840926 - MIR SINE MIR -31 231 136 4221 127 74 28 chr18 148008 148155 -85840779 - Tigger1 DNA MER2_type 0 2418 2279 1697 133 60 11 chr18 148155 148440 -85840494 + AluJb SINE Alu 1 299 -13 4221 127 74 28 chr18 148440 149010 -85839924 - Tigger1 DNA MER2_type -139 2279 1668 936 175 122 0 chr18 149012 149201 -85839733 - Tigger1 DNA MER2_type -2073 345 134 235 224 103 0 chr18 150206 150264 -85838670 + MIR3 SINE MIR 125 188 -20 2159 103 3 7 chr18 150377 150679 -85838255 + AluSq SINE Alu 3 303 -10 917 172 0 6 chr18 150731 150888 -85838046 + FRAM SINE Alu 1 156 -10 201 305 156 23 chr18 150914 151042 -85837892 - MIR SINE MIR -51 211 67 211 364 72 66 chr18 151054 151271 -85837663 + L2 LINE L2 2563 2777 -495 2130 116 0 0 chr18 151271 151582 -85837352 - AluSq SINE Alu 0 311 1 211 364 72 66 chr18 151582 151858 -85837076 + L2 LINE L2 2777 3056 -216 550 192 17 0 chr18 152209 152329 -85836605 - L1MB3 LINE L1 -2 6181 6060 411 149 14 0 chr18 152330 152404 -85836530 - L1MB3 LINE L1 -189 5982 5908 * 1680 155 52 13 chr18 152394 152784 -85836150 - L1MB3 LINE L1 -305 5857 5426 258 259 122 122 chr18 153072 153153 -85835781 + MIR3 SINE MIR 30 113 -95 2062 79 72 4 chr18 153153 153431 -85835503 - AluSg SINE Alu -13 297 1 258 259 122 122 chr18 153431 153480 -85835454 + MIR3 SINE MIR 112 160 -48 22 0 0 0 chr18 153625 153647 -85835287 + AT_rich Low_complexity Low_complexity 1 22 0 1865 133 31 51 chr18 154045 154399 -85834535 - L1PA15 LINE L1 0 6165 5819 21 0 0 0 chr18 154408 154429 -85834505 + AT_rich Low_complexity Low_complexity 1 21 0 2256 106 3 0 chr18 154806 155108 -85833826 - AluSx SINE Alu -9 303 1 1913 107 14 14 chr18 155311 155601 -85833333 - AluSx SINE Alu -22 290 1 205 216 276 67 chr18 155880 156014 -85832920 - MIR SINE MIR -2 260 99 21 0 0 78 chr18 156680 156691 -85832243 + AT_rich Low_complexity Low_complexity 1 11 -36 2150 131 0 0 chr18 156691 156988 -85831946 - AluSx SINE Alu -15 297 1 21 0 0 78 chr18 156988 157027 -85831907 + AT_rich Low_complexity Low_complexity 11 47 0 654 224 94 15 chr18 157243 157444 -85831490 - L1M4 LINE L1 -1199 4947 4731 1120 62 0 170 chr18 157445 157639 -85831295 + AluSc SINE Alu 127 287 -22 937 243 41 69 chr18 157691 157866 -85831068 - L1M4 LINE L1 -1537 4609 4431 1689 163 7 36 chr18 157866 158167 -85830767 - AluJo SINE Alu -20 292 1 937 243 41 69 chr18 158167 158275 -85830659 - L1M4 LINE L1 -1715 4431 4322 2311 83 40 0 chr18 158275 158576 -85830358 - AluSp SINE Alu 0 313 1 937 243 41 69 chr18 158576 158757 -85830177 - L1M4 LINE L1 -1824 4322 4157 2056 143 0 0 chr18 158792 159085 -85829849 - AluSx SINE Alu -19 293 1 2274 77 3 23 chr18 159141 159440 -85829494 + AluY SINE Alu 1 293 -18 1843 114 110 7 chr18 159460 159733 -85829201 + AluSg SINE Alu 1 301 -9 1717 185 0 42 chr18 159840 160153 -85828781 - AluJo SINE Alu -12 300 1 1539 208 34 23 chr18 160660 161044 -85827890 - L1MB8 LINE L1 0 6178 5791 282 247 14 14 chr18 161035 161108 -85827826 - L1M4 LINE L1 -321 5863 5791 * 329 206 14 14 chr18 161099 161172 -85827762 - L1MB5 LINE L1 -311 5863 5791 313 219 14 14 chr18 161163 161236 -85827698 - L1MB5 LINE L1 -311 5863 5791 * 313 219 14 14 chr18 161227 161300 -85827634 - L1MB5 LINE L1 -311 5863 5791 551 240 45 25 chr18 161267 161297 -85827637 - L1PA10 LINE L1 -276 5892 5863 1953 179 79 63 chr18 161297 162348 -85826586 - L1ME1 LINE L1 -312 5854 4775 198 312 40 75 chr18 163053 163252 -85825682 - L2 LINE L2 -404 2910 2719 434 247 122 84 chr18 163365 163734 -85825200 - HAL1 LINE L1 -860 1647 1265 468 313 159 31 chr18 163747 164099 -85824835 - HAL1 LINE L1 -1283 1224 828 1787 149 6 51 chr18 164726 165042 -85823892 + AluJb SINE Alu 3 304 -8 1918 153 16 0 chr18 165400 165707 -85823227 - AluSx SINE Alu 0 312 1 28 0 0 0 chr18 165927 165955 -85822979 + AT_rich Low_complexity Low_complexity 1 28 0 1605 174 13 27 chr18 165955 166253 -85822681 - AluJo SINE Alu -17 295 2 1514 186 28 14 chr18 166432 166717 -85822217 + AluJo SINE Alu 1 289 -23 2197 108 3 0 chr18 166723 167020 -85821914 + AluSx SINE Alu 1 298 -14 21 36 0 0 chr18 167319 167347 -85821587 + AT_rich Low_complexity Low_complexity 1 28 0 285 287 32 0 chr18 167757 167851 -85821083 - L1ME1 LINE L1 -1575 4571 4475 230 252 123 39 chr18 168254 168409 -85820525 - L1ME1 LINE L1 -1980 4166 3999 377 298 154 47 chr18 168448 168747 -85820187 - L1ME1 LINE L1 -2126 4020 3690 2232 81 0 3 chr18 168922 169231 -85819703 - AluSx SINE Alu 0 308 1 500 263 80 73 chr18 169245 169572 -85819362 - L1ME1 LINE L1 -2742 3404 3076 2254 108 3 0 chr18 169724 170031 -85818903 - AluSc SINE Alu 0 309 2 1450 224 71 93 chr18 170045 170719 -85818215 - L1ME3A LINE L1 -11 6159 5501 1027 206 59 62 chr18 171664 172004 -85816930 - L1ME2 LINE L1 -2 6162 5824 323 204 0 91 chr18 171999 172087 -85816847 - L1ME3A LINE L1 -2516 5526 5447 * 413 279 27 0 chr18 172278 172389 -85816545 - MIR3 SINE MIR -23 185 72 2276 117 0 3 chr18 172534 172841 -85816093 + AluSq SINE Alu 1 306 -7 3342 186 36 12 chr18 173681 174407 -85814527 - L1MB8 LINE L1 -5 6173 5431 938 194 177 84 chr18 174682 174901 -85814033 - L1MC4 LINE L1 0 8042 7845 2160 123 0 0 chr18 174901 175193 -85813741 + AluSx SINE Alu 1 292 -20 938 194 177 84 chr18 175193 175423 -85813511 - L1MC4 LINE L1 -197 7845 7470 21 0 0 0 chr18 175498 175519 -85813415 + AT_rich Low_complexity Low_complexity 1 21 0 1463 71 0 16 chr18 176293 176476 -85812458 + AluSg SINE Alu 1 180 -130 370 130 0 0 chr18 176476 176530 -85812404 - AluSg/x SINE Alu -89 211 158 1856 85 0 35 chr18 176530 176790 -85812144 + AluSg SINE Alu 44 294 -16 688 301 140 10 chr18 177122 177630 -85811304 + L2 LINE L2 2578 3164 -149 21 0 0 0 chr18 177993 178014 -85810920 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 178115 178143 -85810791 + AT_rich Low_complexity Low_complexity 1 28 0 1816 127 72 4 chr18 178495 178771 -85810163 - AluSq SINE Alu -18 295 1 27 0 0 0 chr18 178878 178905 -85810029 + AT_rich Low_complexity Low_complexity 1 27 0 34 42 0 0 chr18 179009 179057 -85809877 + AT_rich Low_complexity Low_complexity 1 48 0 2690 221 70 10 chr18 179582 180198 -85808736 - MER82 DNA MER2_type 0 653 1 220 267 67 33 chr18 180449 180539 -85808395 + MIR SINE MIR 63 155 -107 422 234 89 24 chr18 180571 180695 -85808239 + MER94 DNA DNA 2 133 -1 198 0 0 0 chr18 181033 181055 -85807879 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 2073 116 0 7 chr18 181068 181353 -85807581 - AluSc SINE Alu -26 283 1 368 348 88 0 chr18 182416 182597 -85806337 - MIR SINE MIR 0 262 66 260 304 31 81 chr18 183576 183737 -85805197 - MER5A DNA MER1_type -1 188 36 1939 67 47 4 chr18 183861 184114 -85804820 - AluY SINE Alu -11 300 37 1446 154 0 9 chr18 185196 185429 -85803505 - AluJb SINE Alu -81 231 1 4340 188 36 18 chr18 185586 185744 -85803190 - L1MD1 LINE L1 -146 6079 5925 1621 197 0 23 chr18 185744 186043 -85802891 + AluJo SINE Alu 1 292 -20 4340 188 36 18 chr18 186043 186870 -85802064 - L1MD1 LINE L1 -300 5925 5115 1947 120 0 4 chr18 186870 187136 -85801798 + AluSx SINE Alu 1 265 -47 4340 188 36 18 chr18 187136 187674 -85801260 - L1MD1 LINE L1 -1110 5115 4520 1682 182 0 0 chr18 187674 187943 -85800991 + AluJb SINE Alu 26 294 -18 4340 188 36 18 chr18 187943 188210 -85800724 - L1MD1 LINE L1 -1705 4520 4259 788 219 229 76 chr18 188231 188334 -85800600 - L1MD1 LINE L1 -2545 3584 3498 234 81 0 0 chr18 188334 188371 -85800563 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 788 219 229 76 chr18 188371 188979 -85799955 - L1MD1 LINE L1 -2631 3498 2764 1804 119 0 0 chr18 189001 189253 -85799681 - AluSx SINE Alu -15 297 46 21 0 0 0 chr18 189273 189294 -85799640 + AT_rich Low_complexity Low_complexity 1 21 0 598 183 193 5 chr18 189306 189503 -85799431 - L1MD1 LINE L1 -3983 2146 1913 974 228 76 9 chr18 190817 191272 -85797662 - Charlie1b DNA MER1_type -2 521 1 22 0 0 0 chr18 192269 192291 -85796643 + AT_rich Low_complexity Low_complexity 1 22 0 2165 112 17 0 chr18 192577 192872 -85796062 + AluSx SINE Alu 1 300 -12 284 0 0 27 chr18 194216 194253 -85794681 + (TAGA)n Simple_repeat Simple_repeat 2 37 0 391 279 24 67 chr18 194271 194436 -85794498 - MER58A DNA MER1_type -33 191 34 2266 75 4 4 chr18 196219 196500 -85792434 - AluSc SINE Alu -24 285 5 298 299 216 11 chr18 198027 198332 -85790602 - L2 LINE L2 -321 2992 2611 624 229 110 32 chr18 198368 198586 -85790348 - MIR SINE MIR -16 246 12 314 258 110 67 chr18 198598 198897 -85790037 - L2 LINE L2 -1102 2212 1901 229 239 149 15 chr18 200347 200481 -85788453 - L1ME LINE L1 -361 5801 5650 372 181 256 88 chr18 200486 200701 -85788233 + MER112 DNA MER1_type 5 255 -1 623 218 135 18 chr18 201052 201378 -85787556 - L1M4 LINE L1 -2920 3226 2863 371 259 103 46 chr18 201678 201861 -85787073 - L1M4 LINE L1 -3732 2414 2210 2590 53 0 0 chr18 201861 202162 -85786772 - AluY SINE Alu -10 301 1 371 259 103 46 chr18 202162 202241 -85786693 - L1M4 LINE L1 -3936 2210 2137 365 267 73 6 chr18 202715 202880 -85786054 + L1MEd LINE L1 897 1072 -5047 414 298 208 18 chr18 202961 203350 -85785584 - L1MD1 LINE L1 -4837 1473 955 259 265 216 38 chr18 203372 203557 -85785377 - L1MD1 LINE L1 -5855 264 47 2340 97 0 0 chr18 204551 204849 -85784085 + AluSx SINE Alu 1 298 -14 198 256 325 0 chr18 206166 206326 -85782608 - MIR SINE MIR -47 215 4 192 211 0 0 chr18 206350 206388 -85782546 - MIR SINE MIR -1 261 224 696 178 8 31 chr18 207449 207578 -85781356 + FLAM_A SINE Alu 1 126 -7 186 307 105 43 chr18 208366 208623 -85780311 + L2 LINE L2 717 989 -2325 413 168 20 69 chr18 208659 208760 -85780174 - MER58 DNA MER1_type -1 2419 2324 310 250 0 0 chr18 208808 208864 -85780070 - MER58 DNA MER1_type -330 56 1 1005 328 148 48 chr18 208864 209653 -85779281 + L2 LINE L2 1018 1727 -1587 2009 110 0 11 chr18 209653 209935 -85778999 + AluSg SINE Alu 1 279 -31 1005 328 148 48 chr18 209935 210464 -85778470 + L2 LINE L2 1727 2467 -847 199 333 156 28 chr18 210430 210610 -85778324 - L2 LINE L2 -204 3068 2866 * 458 301 23 8 chr18 210747 210880 -85778054 - MIR3 SINE MIR -21 187 53 1556 168 3 56 chr18 211001 211305 -85777629 - AluJo SINE Alu -24 288 1 600 229 0 0 chr18 211392 211501 -85777433 - FLAM_A SINE Alu -33 109 1 21 36 0 0 chr18 211786 211814 -85777120 + AT_rich Low_complexity Low_complexity 1 28 0 857 188 40 74 chr18 212189 212348 -85776586 - MER58A DNA MER1_type -2196 224 72 1689 172 24 7 chr18 212348 212644 -85776290 - AluJo SINE Alu -11 301 1 857 188 40 74 chr18 212644 212686 -85776248 - MER58A DNA MER1_type -2348 72 30 461 280 126 5 chr18 212898 213110 -85775824 - L1ME LINE L1 -559 5603 5367 1449 285 129 56 chr18 213185 213558 -85775376 - L1ME LINE L1 -877 5269 4924 2232 107 10 0 chr18 213558 213858 -85775076 + AluSp SINE Alu 1 303 -10 1449 285 129 56 chr18 213858 214798 -85774136 - L1ME LINE L1 -1222 4924 4054 864 109 0 29 chr18 214798 214935 -85773999 - FLAM_C SINE Alu 0 133 1 1449 285 129 56 chr18 214935 216420 -85772514 - L1ME LINE L1 -2092 4054 2267 204 40 0 0 chr18 216601 216626 -85772308 + (T)n Simple_repeat Simple_repeat 1 25 0 8738 143 47 9 chr18 216735 217594 -85771340 + Tigger1 DNA MER2_type 848 1791 -627 1948 164 10 0 chr18 217594 217898 -85771036 + AluJo SINE Alu 1 307 -5 8738 143 47 9 chr18 217898 218551 -85770383 + Tigger1 DNA MER2_type 1791 2418 0 3679 228 128 71 chr18 218571 218743 -85770191 - L1M4 LINE L1 -966 5180 5019 2386 59 3 13 chr18 218743 219046 -85769888 - AluY SINE Alu -11 300 1 3679 228 128 71 chr18 219046 219057 -85769877 - L1M4 LINE L1 -1127 5019 5010 2161 70 10 47 chr18 219057 219356 -85769578 - AluSp SINE Alu -23 290 3 3679 228 128 71 chr18 219356 219894 -85769040 - L1M4 LINE L1 -1136 5010 4504 2181 124 7 0 chr18 219894 220201 -85768733 - AluSx SINE Alu -3 309 1 3679 228 128 71 chr18 220201 220245 -85768689 - L1M4 LINE L1 -1642 4504 4464 955 176 31 0 chr18 220245 220404 -85768530 - AluJo/FRAM SINE Alu -2 300 137 1896 149 10 13 chr18 220407 220708 -85768226 - AluJb SINE Alu -12 300 1 3679 228 128 71 chr18 220708 221867 -85767067 - L1M4 LINE L1 -1683 4463 3140 32 43 0 0 chr18 221870 221916 -85767018 + AT_rich Low_complexity Low_complexity 1 46 0 684 220 0 0 chr18 221955 222087 -85766847 - FLAM_A SINE Alu -1 132 1 313 293 138 27 chr18 222337 222525 -85766409 - L1 LINE L1 -1053 5093 4885 320 276 234 30 chr18 222557 222861 -85766073 - L1 LINE L1 -1446 4700 4335 973 195 0 0 chr18 222911 223080 -85765854 + FRAM SINE Alu 1 169 -7 216 0 0 0 chr18 223641 223665 -85765269 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 1686 167 18 3 chr18 223668 223950 -85764984 - AluJb SINE Alu -24 288 3 614 232 26 4 chr18 224091 224265 -85764669 - L1ME1 LINE L1 -5 6161 5986 936 204 94 17 chr18 224284 224519 -85764415 - L1MB7 LINE L1 -65 6119 5867 1786 174 0 46 chr18 225210 225537 -85763397 - AluJo SINE Alu 0 312 1 1539 208 34 23 chr18 226044 226428 -85762506 - L1MB8 LINE L1 0 6178 5791 282 247 14 14 chr18 226419 226492 -85762442 - L1MB7 LINE L1 -321 5863 5791 * 329 206 14 14 chr18 226483 226556 -85762378 - L1ME1 LINE L1 -311 5863 5791 289 221 15 15 chr18 226547 226615 -85762319 - L1M4 LINE L1 -311 5863 5796 * 314 206 14 14 chr18 226611 226684 -85762250 - L1MB5 LINE L1 -311 5863 5791 * 329 206 14 14 chr18 226675 226748 -85762186 - L1MB5 LINE L1 -311 5863 5791 313 219 14 14 chr18 226739 226812 -85762122 - L1MB5 LINE L1 -311 5863 5791 551 240 45 25 chr18 226779 226809 -85762125 - L1PA10 LINE L1 -276 5892 5863 1953 179 79 63 chr18 226809 227860 -85761074 - L1ME1 LINE L1 -312 5854 4775 198 312 40 75 chr18 228565 228764 -85760170 - L2 LINE L2 -404 2910 2719 434 247 122 84 chr18 228877 229246 -85759688 - HAL1 LINE L1 -860 1647 1265 468 313 159 31 chr18 229259 229611 -85759323 - HAL1 LINE L1 -1283 1224 828 1783 149 6 51 chr18 230238 230554 -85758380 + AluJb SINE Alu 3 304 -8 1918 153 16 0 chr18 230913 231220 -85757714 - AluSx SINE Alu 0 312 1 28 0 0 0 chr18 231440 231468 -85757466 + AT_rich Low_complexity Low_complexity 1 28 0 1605 174 13 27 chr18 231468 231766 -85757168 - AluJo SINE Alu -17 295 2 1487 189 28 14 chr18 231945 232230 -85756704 + AluJo SINE Alu 1 289 -23 2197 108 3 0 chr18 232236 232533 -85756401 + AluSx SINE Alu 1 298 -14 21 36 0 0 chr18 232832 232860 -85756074 + AT_rich Low_complexity Low_complexity 1 28 0 285 287 32 0 chr18 233270 233364 -85755570 - L1ME1 LINE L1 -1575 4571 4475 230 252 123 39 chr18 233767 233922 -85755012 - L1ME1 LINE L1 -1980 4166 3999 376 305 116 81 chr18 233961 234331 -85754603 - L1ME1 LINE L1 -2126 4020 3638 2232 81 0 3 chr18 234435 234744 -85754190 - AluSx SINE Alu 0 308 1 500 263 80 73 chr18 234758 235085 -85753849 - L1ME1 LINE L1 -2742 3404 3076 2307 101 3 0 chr18 235237 235544 -85753390 - AluSc SINE Alu 0 309 2 1450 224 71 93 chr18 235558 236232 -85752702 - L1ME3A LINE L1 -11 6159 5501 1027 206 59 62 chr18 237177 237517 -85751417 - L1ME2 LINE L1 -2 6162 5824 323 204 0 91 chr18 237512 237600 -85751334 - L1ME3A LINE L1 -2469 5526 5447 * 413 279 27 0 chr18 237791 237902 -85751032 - MIR3 SINE MIR -23 185 72 2276 117 0 3 chr18 238047 238354 -85750580 + AluSq SINE Alu 1 306 -7 3342 186 36 12 chr18 239194 239920 -85749014 - L1MB8 LINE L1 -5 6173 5431 938 194 177 84 chr18 240195 240414 -85748520 - L1MC4 LINE L1 0 8042 7845 2160 123 0 0 chr18 240414 240706 -85748228 + AluSx SINE Alu 1 292 -20 938 194 177 84 chr18 240706 240936 -85747998 - L1MC4 LINE L1 -197 7845 7470 21 0 0 0 chr18 241011 241032 -85747902 + AT_rich Low_complexity Low_complexity 1 21 0 1449 77 0 16 chr18 241809 241992 -85746942 + AluSg SINE Alu 1 180 -130 370 130 0 0 chr18 241992 242046 -85746888 - AluSp/q SINE Alu -90 213 160 1878 81 0 35 chr18 242046 242306 -85746628 + AluSg SINE Alu 44 294 -16 688 302 139 10 chr18 242637 243146 -85745788 + L2 LINE L2 2578 3164 -149 21 0 0 0 chr18 243509 243530 -85745404 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 243631 243659 -85745275 + AT_rich Low_complexity Low_complexity 1 28 0 1816 127 72 4 chr18 244011 244287 -85744647 - AluSq SINE Alu -18 295 1 27 0 0 0 chr18 244394 244421 -85744513 + AT_rich Low_complexity Low_complexity 1 27 0 34 42 0 0 chr18 244525 244573 -85744361 + AT_rich Low_complexity Low_complexity 1 48 0 2666 222 70 10 chr18 245098 245714 -85743220 - MER82 DNA MER2_type 0 653 1 220 267 67 33 chr18 245965 246055 -85742879 + MIR SINE MIR 63 155 -107 422 234 89 24 chr18 246087 246211 -85742723 + MER94 DNA DNA 2 133 -1 198 0 0 0 chr18 246549 246571 -85742363 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 2073 116 0 7 chr18 246584 246869 -85742065 - AluSc SINE Alu -26 283 1 368 348 88 0 chr18 247932 248113 -85740821 - MIR SINE MIR 0 262 66 260 304 31 81 chr18 249092 249253 -85739681 - MER5A DNA MER1_type -1 188 36 1939 67 47 4 chr18 249377 249630 -85739304 - AluY SINE Alu -11 300 37 1446 154 0 9 chr18 250717 250950 -85737984 - AluJb SINE Alu -81 231 1 4122 182 39 12 chr18 251107 251265 -85737669 - L1MD1 LINE L1 -146 6490 6338 1621 197 0 23 chr18 251265 251564 -85737370 + AluJo SINE Alu 1 292 -20 4122 182 39 12 chr18 251564 252391 -85736543 - L1MD1 LINE L1 -298 6338 5473 1933 124 0 4 chr18 252391 252657 -85736277 + AluSx SINE Alu 1 265 -47 4122 182 39 12 chr18 252657 252805 -85736129 - L1MD1 LINE L1 -1163 5473 5330 1039 171 24 16 chr18 252804 253055 -85735879 - L1MD1 LINE L1 -1618 4922 4670 * 739 215 94 104 chr18 253076 253179 -85735755 - L1MD1 LINE L1 -2545 3995 3892 234 81 0 0 chr18 253179 253216 -85735718 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 739 215 94 104 chr18 253216 253614 -85735320 - L1MD1 LINE L1 -2648 3892 3499 523 232 116 10 chr18 253617 253824 -85735110 - L1MD1 LINE L1 -3137 3403 3175 1791 123 0 0 chr18 253846 254098 -85734836 - AluSx SINE Alu -15 297 46 21 0 0 0 chr18 254118 254139 -85734795 + AT_rich Low_complexity Low_complexity 1 21 0 588 179 199 5 chr18 254151 254347 -85734587 - L1MD1 LINE L1 -3983 2557 2324 974 228 76 9 chr18 255661 256116 -85732818 - Charlie1b DNA MER1_type -2 521 1 22 0 0 0 chr18 257113 257135 -85731799 + AT_rich Low_complexity Low_complexity 1 22 0 2165 112 17 0 chr18 257419 257714 -85731220 + AluSx SINE Alu 1 300 -12 284 0 0 27 chr18 259060 259097 -85729837 + (TAGA)n Simple_repeat Simple_repeat 2 37 0 415 286 25 43 chr18 259119 259280 -85729654 - MER58A DNA MER1_type -33 191 34 2266 75 4 4 chr18 261066 261347 -85727587 - AluSc SINE Alu -24 285 5 300 299 227 22 chr18 262874 263179 -85725755 - L2 LINE L2 -321 2992 2611 616 229 110 32 chr18 263215 263433 -85725501 - MIR SINE MIR -16 246 12 322 264 107 63 chr18 263445 263744 -85725190 - L2 LINE L2 -1102 2212 1901 229 239 149 15 chr18 265383 265517 -85723417 - L1ME LINE L1 -361 5784 5633 372 181 256 88 chr18 265522 265737 -85723197 + MER112 DNA MER1_type 5 255 -1 305 292 130 7 chr18 265866 266020 -85722914 - L1ME LINE L1 -2329 5462 5290 591 221 135 18 chr18 266088 266414 -85722520 - L1ME LINE L1 -2920 3209 2846 371 259 103 46 chr18 266714 266897 -85722037 - L1ME LINE L1 -3732 2397 2193 2563 60 0 0 chr18 266897 267198 -85721736 - AluY SINE Alu -10 301 1 371 259 103 46 chr18 267198 267277 -85721657 - L1ME LINE L1 -3936 2193 2120 365 267 73 6 chr18 267751 267916 -85721018 + L1MEd LINE L1 897 1072 -5047 414 298 208 18 chr18 267997 268386 -85720548 - L1MEd LINE L1 -4837 1473 955 2285 109 0 0 chr18 269587 269890 -85719044 + AluSx SINE Alu 1 303 -9 198 256 325 0 chr18 271202 271362 -85717572 - MIR SINE MIR -47 215 4 192 211 0 0 chr18 271386 271424 -85717510 - MIR SINE MIR -1 261 224 696 178 8 31 chr18 272486 272615 -85716319 + FLAM_A SINE Alu 1 126 -7 220 205 295 27 chr18 272851 272963 -85715971 - L3 LINE CR1 -6 1571 1430 413 168 20 69 chr18 273699 273800 -85715134 - MER58 DNA MER1_type -1 2419 2324 310 250 0 0 chr18 273848 273904 -85715030 - MER58 DNA MER1_type -330 56 1 1019 327 148 48 chr18 273904 274693 -85714241 + L2 LINE L2 1018 1727 -1587 2015 110 0 7 chr18 274693 274974 -85713960 + AluSg SINE Alu 1 279 -31 1019 327 148 48 chr18 274974 275503 -85713431 + L2 LINE L2 1727 2467 -847 199 333 156 28 chr18 275469 275649 -85713285 - L2 LINE L2 -204 3068 2866 * 458 301 23 8 chr18 275786 275919 -85713015 - MIR3 SINE MIR -21 187 53 1556 168 3 56 chr18 276040 276344 -85712590 - AluJo SINE Alu -24 288 1 600 229 0 0 chr18 276431 276540 -85712394 - FLAM_A SINE Alu -33 109 1 21 36 0 0 chr18 276825 276853 -85712081 + AT_rich Low_complexity Low_complexity 1 28 0 857 188 40 74 chr18 277228 277387 -85711547 - MER58A DNA MER1_type -2196 224 72 1666 176 24 7 chr18 277387 277683 -85711251 - AluJo SINE Alu -11 301 1 857 188 40 74 chr18 277683 277725 -85711209 - MER58A DNA MER1_type -2348 72 30 534 275 110 5 chr18 277937 278152 -85710782 - L1ME LINE L1 -559 5603 5367 1367 284 129 58 chr18 278227 278600 -85710334 - L1ME LINE L1 -877 5269 4924 2216 110 10 0 chr18 278600 278900 -85710034 + AluSp SINE Alu 1 303 -10 1367 284 129 58 chr18 278900 279840 -85709094 - L1ME LINE L1 -1222 4924 4052 864 109 0 29 chr18 279840 279977 -85708957 - FLAM_C SINE Alu 0 133 1 1367 284 129 58 chr18 279977 281466 -85707468 - L1ME LINE L1 -2094 4052 2267 2508 22 0 35 chr18 281647 281963 -85706971 - AluY SINE Alu -5 306 2 2186 128 10 0 chr18 282459 282757 -85706177 - AluSx SINE Alu -11 301 1 2036 132 7 3 chr18 283170 283466 -85705468 - AluSx SINE Alu -15 297 1 1766 142 54 42 chr18 283696 284028 -85704906 - MER7A DNA MER2_type -5 341 8 22 35 0 0 chr18 284085 284114 -85704820 + AT_rich Low_complexity Low_complexity 1 29 0 2101 132 3 3 chr18 284595 284905 -85704029 - AluSx SINE Alu -2 310 1 3594 91 4 17 chr18 285940 286423 -85702511 - MER1A DNA MER1_type 0 529 53 1684 123 0 4 chr18 287495 287731 -85701203 + AluSq SINE Alu 1 235 -78 892 102 0 0 chr18 288729 288847 -85700087 + AluSg/x SINE Alu 172 289 -21 34 0 0 0 chr18 289498 289532 -85699402 + AT_rich Low_complexity Low_complexity 1 34 0 478 295 85 42 chr18 289601 290372 -85698562 - L1MEd LINE L1 -738 1752 852 21 71 0 0 chr18 291216 291258 -85697676 + AT_rich Low_complexity Low_complexity 1 42 0 1566 108 0 0 chr18 291995 292209 -85696725 + AluSq SINE Alu 1 214 -99 180 0 0 0 chr18 292217 292237 -85696697 + (A)n Simple_repeat Simple_repeat 1 20 0 889 251 68 0 chr18 292625 292832 -85696102 - MER58A DNA MER1_type -3 221 1 22 0 0 0 chr18 292991 293013 -85695921 + AT_rich Low_complexity Low_complexity 1 22 0 1136 286 88 21 chr18 293464 293852 -85695082 + MLT1J LTR MaLR 60 473 -38 2224 97 7 0 chr18 294060 294350 -85694584 - AluY SINE Alu -19 292 1 2252 98 10 0 chr18 294685 294981 -85693953 + AluSg SINE Alu 1 299 -11 25 0 0 0 chr18 295496 295521 -85693413 + AT_rich Low_complexity Low_complexity 1 25 0 419 221 25 51 chr18 295522 295680 -85693254 + L2 LINE L2 1727 1880 -1434 455 284 60 0 chr18 296423 296557 -85692377 - MIR SINE MIR -70 192 51 3442 169 24 5 chr18 296810 297395 -85691539 + MER6A DNA MER2_type 5 600 -5 722 268 35 43 chr18 298221 298596 -85690338 + L1MC/D LINE L1 5302 5664 -863 2038 128 3 16 chr18 299202 299508 -85689426 - AluJb SINE Alu -8 304 3 1395 104 104 56 chr18 299831 300099 -85688835 + Tigger1 DNA MER2_type 3 283 -2135 1356 156 0 18 chr18 300116 300334 -85688600 - AluJb SINE Alu -15 297 84 12874 113 37 54 chr18 300334 301900 -85687034 + Tigger1 DNA MER2_type 280 1873 -545 531 125 0 0 chr18 301900 301972 -85686962 - AluSp/q SINE Alu -16 297 226 12874 113 37 54 chr18 301972 302499 -85686435 + Tigger1 DNA MER2_type 1873 2407 -11 912 224 149 19 chr18 302648 302916 -85686018 + L1MC4 LINE L1 6465 6767 -1275 543 275 61 42 chr18 302937 303553 -85685381 + L1MEd LINE L1 703 1580 -910 349 45 0 0 chr18 303554 303598 -85685336 + Tigger1 DNA MER2_type 1595 1638 -780 475 260 41 7 chr18 303806 303952 -85684982 - MIR SINE MIR -8 254 104 251 252 165 39 chr18 303990 304117 -85684817 + L1ME3A LINE L1 6028 6170 0 22 0 0 0 chr18 305397 305419 -85683515 + AT_rich Low_complexity Low_complexity 1 22 0 1298 174 34 4 chr18 305821 306056 -85682878 - MIR SINE MIR -9 253 12 567 172 23 16 chr18 306058 306186 -85682748 + L1ME4a LINE L1 5787 5915 -206 377 233 47 12 chr18 306654 306740 -85682194 + L3 LINE CR1 990 1078 -499 652 283 97 17 chr18 306752 306989 -85681945 + L3 LINE CR1 1321 1576 -1 280 292 44 53 chr18 307088 307201 -85681733 - MER5A DNA MER1_type -60 129 18 185 304 80 43 chr18 307319 307457 -85681477 + L2 LINE L2 2896 3038 -234 2442 52 3 0 chr18 308388 308677 -85680257 - AluY SINE Alu -21 290 1 530 296 83 0 chr18 308968 309100 -85679834 + L2 LINE L2 3129 3271 -1 315 277 310 0 chr18 309810 309965 -85678969 - MIR SINE MIR -1 261 59 377 278 0 0 chr18 311562 311659 -85677275 + MIR SINE MIR 55 151 -57 352 191 22 67 chr18 311675 311764 -85677170 + MER5A DNA MER1_type 28 112 -77 2129 104 7 0 chr18 311838 312135 -85676799 - AluSx SINE Alu -13 299 1 314 98 20 0 chr18 312285 312336 -85676598 + (TA)n Simple_repeat Simple_repeat 1 52 0 5316 142 61 22 chr18 314223 314409 -85674525 + MER49 LTR ERV1 1 178 -745 2125 98 10 20 chr18 314409 314706 -85674228 + AluSq SINE Alu 1 294 -19 5316 142 61 22 chr18 314706 315408 -85673526 + MER49 LTR ERV1 178 923 0 1901 146 17 7 chr18 315695 315989 -85672945 - AluJo SINE Alu -15 297 1 2425 86 0 0 chr18 316254 316558 -85672376 + AluSq SINE Alu 1 304 -9 269 26 26 0 chr18 316564 316602 -85672332 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr18 317063 317084 -85671850 + AT_rich Low_complexity Low_complexity 1 21 0 2045 134 3 3 chr18 317179 317478 -85671456 + AluSx SINE Alu 1 299 -13 208 100 0 0 chr18 317619 317649 -85671285 - MIR SINE MIR -13 249 220 361 304 112 0 chr18 317860 317985 -85670949 + LTR16A1 LTR ERVL 307 445 -12 1357 233 167 27 chr18 317989 318396 -85670538 - LTR16B LTR ERVL 0 464 1 2221 117 0 0 chr18 318550 318849 -85670085 - AluSx SINE Alu -13 299 1 27 29 0 0 chr18 318853 318887 -85670047 + AT_rich Low_complexity Low_complexity 1 34 0 468 245 147 7 chr18 318903 319046 -85669888 - MIR SINE MIR -10 252 90 509 258 22 116 chr18 319097 319364 -85669570 - L2 LINE L2 -236 3077 2836 231 36 0 0 chr18 320243 320271 -85668663 + (TG)n Simple_repeat Simple_repeat 1 28 0 567 212 228 11 chr18 320391 320580 -85668354 - MER69 DNA AcHobo -27 2499 2270 830 171 16 0 chr18 320580 320709 -85668225 - AluJb SINE Alu -180 132 2 529 172 166 37 chr18 320713 320876 -85668058 - MER69 DNA AcHobo -250 2276 2093 634 184 48 0 chr18 321228 321375 -85667559 + L1MEc LINE L1 2116 2269 -4127 1390 196 0 0 chr18 321398 321669 -85667265 + L1MD3 LINE L1 7723 7993 -2 1210 179 155 0 chr18 321743 321995 -85666939 + AluJo SINE Alu 19 309 -3 6440 235 57 57 chr18 321996 322705 -85666229 + L1MEc LINE L1 2272 2980 -3235 1812 188 0 0 chr18 322705 323013 -85665921 + AluJb SINE Alu 1 308 -4 6440 235 57 57 chr18 323013 323419 -85665515 + L1MEc LINE L1 2980 3385 -2830 1716 144 43 22 chr18 323419 323696 -85665238 + AluJo SINE Alu 2 284 -28 6440 235 57 57 chr18 323696 324118 -85664816 + L1MEc LINE L1 3385 3806 -2409 2141 132 0 10 chr18 324118 324421 -85664513 + AluSx SINE Alu 1 300 -12 6440 235 57 57 chr18 324421 324912 -85664022 + L1MEc LINE L1 3806 4296 -1919 2123 106 14 3 chr18 324912 325196 -85663738 + AluSc SINE Alu 1 287 -22 6440 235 57 57 chr18 325196 325855 -85663079 + L1MEc LINE L1 4296 4961 -1254 10842 93 44 226 chr18 325873 325928 -85663006 + Tigger1 DNA MER2_type 1 64 -2354 1839 143 22 44 chr18 325928 326243 -85662691 - AluJb SINE Alu -4 308 1 10842 93 44 226 chr18 326243 326694 -85662240 + Tigger1 DNA MER2_type 64 596 -1822 870 170 7 7 chr18 326694 326841 -85662093 - FRAM SINE Alu -24 152 6 10842 93 44 226 chr18 326841 326988 -85661946 + Tigger1 DNA MER2_type 596 768 -1650 1305 174 0 25 chr18 326988 327223 -85661711 - AluJb SINE Alu 0 312 84 10842 93 44 226 chr18 327223 328166 -85660768 + Tigger1 DNA MER2_type 768 1882 -536 819 140 7 7 chr18 328166 328302 -85660632 + FLAM_C SINE Alu 3 138 -5 2472 68 7 7 chr18 328306 328613 -85660321 + AluSp SINE Alu 1 307 -6 10842 93 44 226 chr18 328613 329190 -85659744 + Tigger1 DNA MER2_type 1885 2566 148 2152 123 0 0 chr18 329190 329483 -85659451 + AluSx SINE Alu 1 293 -19 10842 93 44 226 chr18 329483 329539 -85659395 + Tigger1 DNA MER2_type 2566 2181 -237 2010 156 0 0 chr18 329539 329847 -85659087 - AluJb SINE Alu -3 309 2 10842 93 44 226 chr18 329847 330050 -85658884 + Tigger1 DNA MER2_type 2180 2418 0 769 212 55 63 chr18 330051 330306 -85658628 + L1MEc LINE L1 4978 5230 -985 * 969 272 118 28 chr18 330295 330533 -85658401 + L1MC4a LINE L1 4704 4919 -1245 2268 84 0 3 chr18 330533 330841 -85658093 + AluSq SINE Alu 1 307 0 969 272 118 28 chr18 330841 331669 -85657265 + L1MC4a LINE L1 4919 5790 -374 2336 89 0 0 chr18 332558 332850 -85656084 + AluSx SINE Alu 1 292 -20 1729 157 25 14 chr18 333059 333340 -85655594 + AluJo SINE Alu 1 284 -28 22 35 0 0 chr18 333340 333369 -85655565 + AT_rich Low_complexity Low_complexity 1 29 0 1568 156 102 0 chr18 333611 333886 -85655048 + MER7A DNA MER2_type 45 345 -1 249 351 18 30 chr18 333894 334062 -85654872 + L2 LINE L2 2857 3022 -250 1925 134 14 17 chr18 334062 334352 -85654582 + AluSx SINE Alu 1 289 -23 2602 53 0 0 chr18 334835 335134 -85653800 + AluY SINE Alu 1 299 -12 5692 44 8 0 chr18 335144 335826 -85653108 + L1PA8 LINE L1 5498 6184 0 312 305 128 37 chr18 336086 336127 -85652807 - MIR SINE MIR -6 256 220 2191 100 10 3 chr18 336127 336416 -85652518 - AluSg SINE Alu -19 291 1 312 305 128 37 chr18 336416 336561 -85652373 - MIR SINE MIR -42 220 53 362 85 0 0 chr18 336868 336915 -85652019 + MADE1 DNA Mariner 1 47 -33 3128 110 16 21 chr18 337092 337528 -85651406 + MER57B LTR ERV1 1 434 0 476 274 0 0 chr18 337580 337697 -85651237 + L2 LINE L2 3190 3306 -7 1923 137 3 31 chr18 337987 338308 -85650626 + AluJb SINE Alu 1 312 0 727 233 25 0 chr18 338408 338571 -85650363 + LTR33 LTR ERVL 1 167 -354 527 277 209 23 chr18 339032 339252 -85649682 + MIR SINE MIR 2 262 0 653 240 31 70 chr18 339379 339784 -85649150 + MLT1J1 LTR MaLR 12 441 -5 884 132 6 78 chr18 340356 340523 -85648411 - L1PA16 LINE L1 0 6166 6012 270 0 0 0 chr18 340985 341015 -85647919 + (TC)n Simple_repeat Simple_repeat 1 30 0 576 329 76 30 chr18 341765 342133 -85646801 + ERVL LTR ERVL 3720 4104 -1660 303 288 0 14 chr18 342139 342212 -85646722 + ERVL LTR ERVL 4234 4305 -1180 764 316 24 4 chr18 342303 342553 -85646381 + ERVL LTR ERVL 4552 4806 -958 2361 135 47 3 chr18 344236 344598 -85644336 + L1PB4 LINE L1 5777 6154 -2 601 226 80 147 chr18 344895 345209 -85643725 + LTR37B LTR ERV1 10 302 -166 978 161 11 6 chr18 345212 345392 -85643542 - L1MC3 LINE L1 0 7785 7605 1476 105 5 0 chr18 345415 345615 -85643319 - AluSp SINE Alu -2 311 111 1549 160 23 0 chr18 345615 345877 -85643057 - L1MC3 LINE L1 -522 7263 6996 3446 197 39 20 chr18 345886 346651 -85642283 - L1MC3 LINE L1 -207 6137 5932 393 212 0 0 chr18 346810 346876 -85642058 - AluJ/FLAM SINE Alu -236 66 1 1686 160 12 1 chr18 346876 347174 -85641760 - L1MC2 LINE L1 -322 5829 5672 651 191 7 52 chr18 347297 347433 -85641501 - FLAM_A SINE Alu -12 130 1 189 260 250 10 chr18 347823 347923 -85641011 + MIR SINE MIR 34 157 -105 2400 101 3 0 chr18 348007 348314 -85640620 - AluSq SINE Alu -5 308 1 1291 174 24 5 chr18 348370 348582 -85640352 - MER58A DNA MER1_type -6 218 3 1293 171 0 32 chr18 348736 348982 -85639952 - AluJb SINE Alu -10 302 65 218 344 44 0 chr18 349234 349324 -85639610 - MIR SINE MIR -35 227 134 1850 165 10 95 chr18 349853 350252 -85638682 - MLT1A1 LTR MaLR 0 365 1 2497 61 0 3 chr18 350954 351266 -85637668 - AluY SINE Alu 0 311 1 1177 169 134 42 chr18 351878 352191 -85636743 + MER4A LTR ERV1 1 342 -322 574 138 252 0 chr18 352244 352367 -85636567 + MER4C LTR ERV1 292 445 -20 2750 93 3 8 chr18 353416 353781 -85635153 + THE1B LTR MaLR 2 364 0 841 88 9 0 chr18 353895 354008 -85634926 + MLT1B LTR MaLR 1 114 -276 2643 128 31 5 chr18 354835 355250 -85633684 + L1PA15 LINE L1 5719 6144 -21 197 32 0 32 chr18 355287 355318 -85633616 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 691 164 17 0 chr18 355332 355480 -85633454 + FLAM_A SINE Alu 6 155 0 672 138 0 0 chr18 355987 356117 -85632817 + (TCCA)n Simple_repeat Simple_repeat 2 131 0 1358 251 105 45 chr18 356669 356882 -85632052 - LTR33 LTR ERVL -1 520 321 1460 184 4 0 chr18 356882 357137 -85631797 + AluJb SINE Alu 6 261 -51 1358 251 105 45 chr18 357137 357409 -85631525 - LTR33 LTR ERVL -200 321 6 413 273 15 8 chr18 357794 357926 -85631008 - MLT1H LTR MaLR -394 155 23 942 272 87 19 chr18 358037 358360 -85630574 + MLT1J LTR MaLR 22 366 -145 2341 83 3 3 chr18 358800 359113 -85629821 + AluSp SINE Alu 1 313 0 218 211 39 19 chr18 359113 359165 -85629769 - MIR SINE MIR -188 74 22 189 355 0 0 chr18 359527 359589 -85629345 + MIR SINE MIR 90 151 -111 402 21 0 0 chr18 360525 360572 -85628362 + (CA)n Simple_repeat Simple_repeat 1 47 0 1502 137 137 4 chr18 360622 360899 -85628035 - AluSg SINE Alu 0 311 2 1775 152 7 3 chr18 360907 361196 -85627738 - AluJb SINE Alu -22 290 1 192 320 72 10 chr18 361325 361422 -85627512 - L2 LINE L2 -218 3054 2952 255 188 87 29 chr18 361696 361765 -85627169 + MIR SINE MIR 79 151 -111 2190 100 0 7 chr18 362234 362544 -85626390 + AluSx SINE Alu 1 308 -4 617 307 74 0 chr18 362675 362877 -85626057 + MIR SINE MIR 46 262 0 2519 29 3 13 chr18 363263 363572 -85625362 - AluY SINE Alu -5 306 1 2301 92 0 0 chr18 363781 364085 -85624849 - AluSx SINE Alu -8 304 1 24 0 0 29 chr18 364611 364628 -85624306 + AT_rich Low_complexity Low_complexity 1 17 -17 246 62 0 0 chr18 364628 364660 -85624274 + (TA)n Simple_repeat Simple_repeat 2 33 0 24 0 0 29 chr18 364660 364677 -85624257 + AT_rich Low_complexity Low_complexity 17 34 0 1612 161 16 1 chr18 365009 365306 -85623628 - L1MC2 LINE L1 -322 5829 5672 609 191 7 52 chr18 365429 365565 -85623369 - FLAM_A SINE Alu -12 130 1 198 258 32 16 chr18 365993 366055 -85622879 + MIR SINE MIR 95 157 -105 2267 107 3 0 chr18 366139 366448 -85622486 - AluSq SINE Alu -3 310 1 1285 174 24 5 chr18 366504 366716 -85622218 - MER58A DNA MER1_type -6 218 3 1206 171 0 33 chr18 366870 367115 -85621819 - AluJb SINE Alu -11 301 65 235 344 44 0 chr18 367367 367457 -85621477 - MIR SINE MIR -35 227 134 1756 165 10 95 chr18 367986 368385 -85620549 - MLT1A1 LTR MaLR 0 365 1 2520 58 0 3 chr18 369088 369400 -85619534 - AluY SINE Alu 0 311 1 1201 166 134 42 chr18 370012 370325 -85618609 + MER4A LTR ERV1 1 342 -322 574 138 252 0 chr18 370378 370501 -85618433 + MER4C LTR ERV1 292 445 -20 197 349 121 35 chr18 371058 371256 -85617678 - L2 LINE L2 -1406 1908 1694 2750 93 3 8 chr18 371550 371915 -85617019 + THE1B LTR MaLR 2 364 0 841 88 9 0 chr18 372029 372142 -85616792 + MLT1B LTR MaLR 1 114 -276 2612 133 31 5 chr18 372969 373384 -85615550 + L1PA15 LINE L1 5719 6144 -21 197 32 0 32 chr18 373421 373452 -85615482 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 706 164 17 0 chr18 373466 373614 -85615320 + FLAM_A SINE Alu 6 155 0 672 138 0 0 chr18 374122 374252 -85614682 + (TCCA)n Simple_repeat Simple_repeat 2 131 0 1346 249 102 51 chr18 374804 375017 -85613917 - LTR33 LTR ERVL -1 520 319 1460 184 4 0 chr18 375017 375272 -85613662 + AluJb SINE Alu 6 261 -51 1346 249 102 51 chr18 375272 375548 -85613386 - LTR33 LTR ERVL -202 319 6 279 0 0 0 chr18 375639 375670 -85613264 + (TA)n Simple_repeat Simple_repeat 2 32 0 401 280 15 8 chr18 375949 376081 -85612853 - MLT1H LTR MaLR -394 155 23 942 272 87 19 chr18 376288 376611 -85612323 + MLT1J LTR MaLR 22 366 -145 2327 86 3 3 chr18 377051 377364 -85611570 + AluSp SINE Alu 1 313 0 218 211 39 19 chr18 377364 377416 -85611518 - MIR SINE MIR -188 74 22 189 355 0 0 chr18 377778 377840 -85611094 + MIR SINE MIR 90 151 -111 384 22 0 0 chr18 378776 378821 -85610113 + (CA)n Simple_repeat Simple_repeat 1 45 0 1471 150 138 0 chr18 378871 379147 -85609787 - AluSg SINE Alu 0 311 2 1775 152 7 3 chr18 379155 379444 -85609490 - AluJb SINE Alu -22 290 1 192 320 72 10 chr18 379573 379670 -85609264 - L2 LINE L2 -218 3054 2952 255 188 87 29 chr18 379944 380013 -85608921 + MIR SINE MIR 79 151 -111 2162 107 0 7 chr18 380482 380792 -85608142 + AluSx SINE Alu 1 308 -4 617 307 74 0 chr18 380923 381125 -85607809 + MIR SINE MIR 46 262 0 2180 35 69 14 chr18 381511 381801 -85607133 - AluY SINE Alu -5 306 1 2282 95 0 0 chr18 382010 382314 -85606620 - AluSx SINE Alu -8 304 1 24 0 0 29 chr18 382840 382857 -85606077 + AT_rich Low_complexity Low_complexity 1 17 -17 246 62 0 0 chr18 382857 382889 -85606045 + (TA)n Simple_repeat Simple_repeat 2 33 0 24 0 0 29 chr18 382889 382906 -85606028 + AT_rich Low_complexity Low_complexity 17 34 0 342 320 120 27 chr18 383862 384012 -85604922 + L2 LINE L2 3102 3265 -7 1016 168 0 20 chr18 384081 384283 -85604651 - L1MB7 LINE L1 0 6184 5987 220 273 0 18 chr18 384453 384508 -85604426 + L2 LINE L2 3257 3310 -3 2181 89 3 0 chr18 384574 384867 -85604067 - AluSp SINE Alu -19 294 1 368 255 326 27 chr18 384930 385114 -85603820 - MIR SINE MIR -10 252 14 258 32 0 0 chr18 385707 385738 -85603196 + (CA)n Simple_repeat Simple_repeat 2 32 0 2130 104 0 3 chr18 386458 386746 -85602188 + AluSx SINE Alu 1 287 -25 363 294 44 29 chr18 386878 387014 -85601920 - L2 LINE L2 0 3313 3176 2051 122 0 0 chr18 388062 388356 -85600578 + AluSx SINE Alu 1 294 -18 201 207 17 35 chr18 388365 388423 -85600511 - MIR3 SINE MIR 0 208 152 1677 168 10 13 chr18 388423 388733 -85600201 + AluJb SINE Alu 1 309 -3 1610 136 0 83 chr18 389147 389448 -85599486 - AluJo SINE Alu 0 312 37 2010 185 75 64 chr18 389476 389866 -85599068 - L1M4 LINE L1 -2989 3157 2756 2133 106 0 3 chr18 389866 390169 -85598765 - AluSx SINE Alu -10 302 1 2010 185 75 64 chr18 390169 390390 -85598544 - L1M4 LINE L1 -3390 2756 2539 21 0 0 0 chr18 390760 390781 -85598153 + AT_rich Low_complexity Low_complexity 1 21 0 764 203 31 0 chr18 391352 391515 -85597419 - L1 LINE L1 -2537 3609 3442 561 180 0 0 chr18 391515 391615 -85597319 - FLAM_A SINE Alu 0 142 43 640 127 8 25 chr18 391619 391737 -85597197 - L1 LINE L1 -2695 3451 3336 463 338 48 19 chr18 392105 392312 -85596622 - MIR SINE MIR -13 249 37 1609 182 3 10 chr18 393316 393624 -85595310 + AluJb SINE Alu 1 306 -6 32 0 0 0 chr18 394013 394045 -85594889 + AT_rich Low_complexity Low_complexity 1 32 0 2096 111 0 29 chr18 394393 394709 -85594225 - AluSx SINE Alu -5 307 1 506 258 98 0 chr18 395963 396095 -85592839 + MIR SINE MIR 106 250 -12 1581 150 7 44 chr18 397419 397713 -85591221 + AluJo SINE Alu 1 283 -29 2112 120 0 0 chr18 397871 398170 -85590764 + AluSx SINE Alu 6 304 -8 2091 151 20 25 chr18 398906 399298 -85589636 + MLT1B LTR MaLR 1 390 0 222 286 39 26 chr18 399538 399615 -85589319 - L2 LINE L2 -2 3311 3234 222 362 67 3 chr18 400065 400205 -85588729 - MIR SINE MIR -39 223 67 185 216 0 0 chr18 400239 400276 -85588658 - MIR SINE MIR -132 76 40 1535 161 10 52 chr18 400386 400691 -85588243 - AluJo SINE Alu -20 292 1 180 77 0 0 chr18 403586 403612 -85585322 + (A)n Simple_repeat Simple_repeat 1 26 0 599 286 61 13 chr18 404720 404951 -85583983 + MIR SINE MIR 10 251 -11 289 241 213 0 chr18 405208 405316 -85583618 - MIR SINE MIR -36 226 96 1726 114 4 4 chr18 405563 405799 -85583135 - AluSp SINE Alu -7 306 71 347 228 22 0 chr18 406500 406592 -85582342 + L2 LINE L2 2422 2515 -799 301 271 61 55 chr18 406704 406885 -85582049 - MER115 DNA AcHobo -479 214 33 334 246 241 0 chr18 406935 407142 -85581792 + L2 LINE L2 2550 2806 -508 583 305 10 15 chr18 407200 407403 -85581531 + MIR SINE MIR 17 218 -44 25 51 0 0 chr18 407555 407594 -85581340 + AT_rich Low_complexity Low_complexity 1 39 0 737 347 102 10 chr18 407877 408454 -85580480 - L3 LINE CR1 -312 1265 636 301 145 232 14 chr18 408539 408608 -85580326 + MLT1E LTR MaLR 1 84 -509 826 148 0 8 chr18 408891 409019 -85579915 - FLAM_C SINE Alu -11 132 6 2680 182 106 6 chr18 409281 409780 -85579154 + MLT1F1 LTR MaLR 19 567 0 1306 141 14 5 chr18 412374 412587 -85576347 + THE1A LTR MaLR 1 215 -140 7804 86 6 2 chr18 412587 413611 -85575323 + THE1A-int LTR MaLR 553 1580 0 2370 111 38 3 chr18 413611 413954 -85574980 + THE1A LTR MaLR 1 355 0 1677 126 24 105 chr18 414158 414491 -85574443 + AluYb8 SINE Alu 1 306 -12 284 317 151 42 chr18 414755 415067 -85573867 + L2 LINE L2 2915 3260 -12 2126 104 0 7 chr18 415090 415248 -85573686 - AluSq SINE Alu -22 291 134 888 45 0 0 chr18 415248 415359 -85573575 - L1PA4 LINE L1 0 6155 6045 2126 104 0 7 chr18 415359 415478 -85573456 - AluSq SINE Alu -179 134 16 21 0 0 0 chr18 415594 415615 -85573319 + AT_rich Low_complexity Low_complexity 1 21 0 432 290 8 8 chr18 416842 416966 -85571968 - MIR SINE MIR -119 143 20 250 262 143 0 chr18 417084 417168 -85571766 - L2 LINE L2 -10 3262 3167 513 99 0 0 chr18 418542 418623 -85570311 + (TCCA)n Simple_repeat Simple_repeat 1 81 0 241 320 80 73 chr18 418659 418959 -85569975 - L2 LINE L2 -54 3218 2917 603 145 26 77 chr18 421278 421358 -85567576 - MER7A DNA MER2_type -2692 337 263 2336 113 3 26 chr18 421358 421703 -85567231 + MER1B DNA MER1_type 1 337 0 603 145 26 77 chr18 421703 421739 -85567195 - MER7A DNA MER2_type -2766 263 227 3463 103 23 6 chr18 421763 422237 -85566697 - MER1A DNA MER1_type -47 482 1 1508 88 62 42 chr18 422237 422475 -85566459 - MER7A DNA MER2_type -105 241 1 566 264 13 13 chr18 422644 422799 -85566135 - MER63A DNA MER1_type 0 210 56 543 199 116 83 chr18 423582 423685 -85565249 - MER5A DNA MER1_type 0 189 76 2425 76 3 25 chr18 423685 424000 -85564934 - AluSq SINE Alu -5 308 1 543 199 116 83 chr18 424000 424077 -85564857 - MER5A DNA MER1_type -113 76 3 348 229 104 0 chr18 424135 424231 -85564703 - MER5A DNA MER1_type -80 109 4 21 0 0 0 chr18 427319 427340 -85561594 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr18 427706 427734 -85561200 + AT_rich Low_complexity Low_complexity 1 28 0 272 217 148 35 chr18 428344 428459 -85560475 - MIR SINE MIR -86 176 49 411 263 120 49 chr18 429589 429855 -85559079 - L2 LINE L2 -56 3257 2973 632 188 8 0 chr18 431317 431469 -85557465 + FLAM_C SINE Alu 1 153 0 1881 157 14 3 chr18 431802 432089 -85556845 + AluSx SINE Alu 3 292 -20 2360 49 0 7 chr18 432092 432417 -85556517 + AluY SINE Alu 1 323 0 959 202 25 15 chr18 432451 432654 -85556280 - MER63A DNA MER1_type -4 206 2 374 36 36 0 chr18 432895 432950 -85555984 + (TTTTTA)n Simple_repeat Simple_repeat 4 60 0 1254 14 0 20 chr18 432959 433107 -85555827 - L1HS LINE L1 -1 6154 6010 241 286 92 10 chr18 435511 435609 -85553325 - MER91A DNA MER1_type -88 108 3 2125 133 3 0 chr18 435924 436226 -85552708 - AluJo SINE Alu -9 303 1 755 261 92 12 chr18 438642 438983 -85549951 + L2 LINE L2 2715 3100 -213 1010 200 0 0 chr18 438986 439171 -85549763 - FAM SINE Alu 0 49 1 486 260 61 36 chr18 439175 439371 -85549563 + L2 LINE L2 3113 3313 0 343 260 118 8 chr18 439473 439600 -85549334 - MIR SINE MIR -101 161 21 2000 164 0 13 chr18 442624 442936 -85545998 - AluJo SINE Alu -4 308 1 304 297 125 16 chr18 443607 443933 -85545001 + L2 LINE L2 2732 3090 -182 219 88 0 0 chr18 444096 444130 -85544804 + (CA)n Simple_repeat Simple_repeat 2 35 0 953 95 0 0 chr18 444852 444989 -85543945 + L1MA5 LINE L1 6158 6294 -6 658 283 83 26 chr18 445041 445391 -85543543 + L1MC4a LINE L1 5526 5895 -1913 328 221 58 29 chr18 445982 446086 -85542848 + L3 LINE CR1 737 843 -734 307 308 46 15 chr18 446117 446247 -85542687 + MIR SINE MIR 105 238 -24 813 116 45 39 chr18 446317 446472 -85542462 - L1MA6 LINE L1 -6 6294 6139 31 0 0 0 chr18 446736 446767 -85542167 + AT_rich Low_complexity Low_complexity 1 31 0 2434 105 5 52 chr18 447249 447631 -85541303 - THE1B LTR MaLR 0 364 1 583 239 107 0 chr18 447631 447790 -85541144 + MER5B DNA MER1_type 3 178 0 423 299 141 50 chr18 447858 448262 -85540672 + L3 LINE CR1 1135 1575 -2 225 0 0 0 chr18 448826 448851 -85540083 + (T)n Simple_repeat Simple_repeat 1 25 0 1114 174 0 5 chr18 448999 449189 -85539745 + L1PA15 LINE L1 5977 6165 0 2223 109 3 0 chr18 449381 449674 -85539260 - AluSq SINE Alu -19 294 1 246 305 80 43 chr18 450067 450254 -85538680 - L2 LINE L2 -253 3060 2867 1541 222 83 35 chr18 450836 451318 -85537616 + MLT1D LTR MaLR 1 505 0 234 116 0 0 chr18 451503 451546 -85537388 + (TG)n Simple_repeat Simple_repeat 1 43 0 225 0 0 0 chr18 451545 451570 -85537364 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 2015 161 0 7 chr18 452452 452762 -85536172 - AluJo SINE Alu 0 312 5 333 252 114 32 chr18 452767 452890 -85536044 - MIR3 SINE MIR -43 165 33 2178 77 7 7 chr18 456000 456305 -85532629 - AluSq SINE Alu 0 305 1 197 291 165 0 chr18 456760 456887 -85532047 - MIR SINE MIR -27 235 88 2258 81 3 36 chr18 457434 457742 -85531192 + AluSx SINE Alu 1 298 -14 26 50 0 0 chr18 458072 458112 -85530822 + AT_rich Low_complexity Low_complexity 1 40 0 1534 192 26 29 chr18 458404 458716 -85530218 - AluJo SINE Alu -1 311 1 820 217 82 0 chr18 458844 459051 -85529883 + MIR SINE MIR 10 233 -29 402 315 27 7 chr18 459156 459302 -85529632 - MLT1L LTR MaLR -325 290 142 42 107 0 0 chr18 459361 459529 -85529405 + AT_rich Low_complexity Low_complexity 1 168 0 1571 171 7 78 chr18 460350 460580 -85528354 - AluJo SINE Alu -25 287 83 2277 104 0 10 chr18 460580 460889 -85528045 + AluSx SINE Alu 6 311 -1 1571 171 7 78 chr18 460889 460967 -85527967 - AluJo SINE Alu -229 83 1 435 307 54 6 chr18 462295 462461 -85526473 + MIR SINE MIR 86 259 -3 392 314 13 44 chr18 462599 462758 -85526176 + MIR3 SINE MIR 30 183 -25 2141 110 0 10 chr18 462830 463131 -85525803 - AluSg SINE Alu -12 298 1 24 0 0 0 chr18 463133 463157 -85525777 + AT_rich Low_complexity Low_complexity 1 24 0 345 109 0 0 chr18 463954 464009 -85524925 + (GGAA)n Simple_repeat Simple_repeat 2 56 0 265 318 0 0 chr18 464358 464424 -85524510 + L2 LINE L2 3141 3206 -66 1233 127 0 0 chr18 464849 465022 -85523912 - AluSg/x SINE Alu -6 304 132 1893 151 20 3 chr18 465023 465322 -85523612 - AluSx SINE Alu -8 304 1 2099 123 14 0 chr18 465711 466004 -85522930 + AluSx SINE Alu 1 297 -15 2998 166 68 28 chr18 468404 469018 -85519916 - L1MB7 LINE L1 0 6184 5546 1299 161 20 102 chr18 469283 469425 -85519509 + MER33 DNA MER1_type 1 153 -2432 1806 186 0 3 chr18 469425 469721 -85519213 + AluJo SINE Alu 1 295 -17 1299 161 20 102 chr18 469721 469931 -85519003 + MER33 DNA MER1_type 153 324 0 204 125 0 0 chr18 471040 471072 -85517862 + (T)n Simple_repeat Simple_repeat 1 32 0 1628 163 3 59 chr18 471961 472267 -85516667 + AluJo SINE Alu 2 290 -22 3299 67 10 40 chr18 475154 475622 -85513312 + L1PA8 LINE L1 5706 6161 -11 1773 74 0 22 chr18 475622 475851 -85513083 + AluY SINE Alu 88 311 0 3299 67 10 40 chr18 475851 475862 -85513072 + L1PA8 LINE L1 6161 6171 -1 1290 276 160 15 chr18 476202 476413 -85512521 - L2 LINE L2 0 3313 3134 2265 120 0 0 chr18 476413 476713 -85512221 - AluSq SINE Alu -13 300 1 1290 276 160 15 chr18 476713 477567 -85511367 - L2 LINE L2 -179 3134 2084 200 98 0 24 chr18 477625 477666 -85511268 + (TCTCTG)n Simple_repeat Simple_repeat 2 41 0 273 200 50 25 chr18 477720 477800 -85511134 + CT-rich Low_complexity Low_complexity 3 84 0 628 283 110 0 chr18 478662 478881 -85510053 - MIR SINE MIR -4 258 16 1573 162 68 47 chr18 479120 479350 -85509584 - MSTA-int LTR MaLR -960 691 450 2248 108 0 3 chr18 479350 479646 -85509288 - AluSg SINE Alu -15 295 1 1573 162 68 47 chr18 479646 479754 -85509180 - MSTA-int LTR MaLR -1201 450 346 384 156 0 0 chr18 479749 479813 -85509121 - MSTA-int LTR MaLR -1145 506 443 * 317 234 177 11 chr18 479813 479988 -85508946 - L2 LINE L2 -1001 2313 2110 2881 153 0 0 chr18 480019 480458 -85508476 - MSTA-int LTR MaLR -1212 439 1 2326 119 80 15 chr18 480458 480860 -85508074 - MSTA LTR MaLR 0 428 1 248 303 71 0 chr18 480862 480961 -85507973 - L2 LINE L2 -1222 2092 1987 807 295 10 24 chr18 481199 481497 -85507437 - LTR16B LTR ERVL -129 335 42 29 70 0 0 chr18 481982 482039 -85506895 + AT_rich Low_complexity Low_complexity 1 57 0 291 146 0 0 chr18 484466 484514 -85504420 - FRAM/FAM SINE Alu -92 83 36 1000 126 0 0 chr18 484557 484692 -85504242 - FLAM_C SINE Alu -8 135 1 415 164 30 0 chr18 484728 484795 -85504139 + L1MB7 LINE L1 5574 5642 -536 250 170 0 38 chr18 484813 484866 -85504068 - L1MC4 LINE L1 -1340 6702 6652 * 2480 158 68 28 chr18 484851 485180 -85503754 + L1MB7 LINE L1 5633 5992 -192 2023 142 3 3 chr18 485180 485476 -85503458 + AluSx SINE Alu 1 296 -16 2480 158 68 28 chr18 485476 485677 -85503257 + L1MB7 LINE L1 5992 6184 0 337 239 15 30 chr18 486844 486978 -85501956 + Charlie7 DNA MER1_type 2480 2611 -1 2529 133 33 24 chr18 486978 487400 -85501534 - MSTB LTR MaLR 0 426 1 2532 68 0 0 chr18 488125 488432 -85500502 - AluY SINE Alu -4 307 1 459 0 0 0 chr18 489058 489109 -85499825 + (TG)n Simple_repeat Simple_repeat 2 52 0 1834 153 0 21 chr18 489112 489400 -85499534 - AluJb SINE Alu -30 282 1 196 259 49 49 chr18 489586 489667 -85499267 + L2 LINE L2 3145 3225 -47 2574 64 0 0 chr18 489834 490145 -85498789 - AluY SINE Alu 0 311 1 236 261 0 62 chr18 490388 490453 -85498481 + MER2 DNA MER2_type 282 342 -3 * 483 185 12 0 chr18 490453 490533 -85498401 - MER2 DNA MER2_type -264 81 1 4484 149 48 33 chr18 490570 490704 -85498230 - L1MA9 LINE L1 0 6312 6181 381 43 0 0 chr18 490704 490751 -85498183 + (TG)n Simple_repeat Simple_repeat 2 48 0 4484 149 48 33 chr18 490751 491492 -85497442 - L1MA9 LINE L1 -131 6181 5424 43 20 0 0 chr18 491537 491587 -85497347 + AT_rich Low_complexity Low_complexity 1 50 0 198 143 0 0 chr18 491737 491772 -85497162 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 1762 163 35 0 chr18 492292 492581 -85496353 - AluJb SINE Alu -13 299 1 1917 151 0 13 chr18 494582 494880 -85494054 - AluSq SINE Alu -19 294 1 2273 104 24 27 chr18 495525 495901 -85493033 + THE1C LTR MaLR 1 375 0 1909 145 31 0 chr18 497129 497418 -85491516 - AluJb SINE Alu -14 298 1 229 326 92 10 chr18 498621 498719 -85490215 - MIR3 SINE MIR -52 156 51 385 226 219 22 chr18 499130 499267 -85489667 + MIR SINE MIR 87 250 -12 198 224 0 0 chr18 499275 499324 -85489610 + (CTA)n Simple_repeat Simple_repeat 2 50 0 281 212 147 33 chr18 499418 499602 -85489332 + L2 LINE L2 2289 2493 -821 1741 166 29 32 chr18 499806 500114 -85488820 + AluJo SINE Alu 1 307 -5 2003 121 47 7 chr18 500745 501043 -85487891 - AluSx SINE Alu -2 310 1 554 206 28 21 chr18 501050 501191 -85487743 - L2 LINE L2 0 3313 3172 2216 127 3 0 chr18 501428 501736 -85487198 + AluSq SINE Alu 1 309 -4 419 267 8 38 chr18 502686 502817 -85486117 + L2 LINE L2 3171 3297 -16 2357 88 7 0 chr18 502832 503127 -85485807 - AluSq SINE Alu -16 297 1 295 322 81 8 chr18 503834 503957 -85484977 - MIR SINE MIR -85 123 20 483 270 117 0 chr18 504232 504395 -85484539 + MIR SINE MIR 73 254 -8 1765 185 29 41 chr18 504399 504816 -85484118 - LTR37A LTR ERV1 0 426 15 491 283 62 6 chr18 504991 505168 -85483766 + MIR SINE MIR 35 221 -41 183 350 140 20 chr18 505682 506074 -85482860 + L3b LINE CR1 1103 1541 -42 196 252 153 0 chr18 506247 506358 -85482576 + L2 LINE L2 3176 3303 -10 221 73 0 24 chr18 507337 507378 -85481556 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 1769 191 7 0 chr18 507822 508121 -85480813 - AluJo SINE Alu -11 301 1 37 52 0 0 chr18 508432 508490 -85480444 + AT_rich Low_complexity Low_complexity 1 58 0 1311 230 42 42 chr18 510042 510399 -85478535 - MER74B LTR ERVL -200 422 66 951 227 160 80 chr18 510873 511385 -85477549 - MLT1H1 LTR MaLR -2 553 1 1987 131 3 14 chr18 511605 511895 -85477039 + AluSx SINE Alu 1 287 -25 585 0 0 0 chr18 511896 511961 -85476973 + (AATAG)n Simple_repeat Simple_repeat 4 68 0 284 292 54 46 chr18 512033 512123 -85476811 - MIR SINE MIR -60 148 55 4390 76 7 0 chr18 512123 512673 -85476261 - MER41A LTR ERV1 0 554 1 284 292 54 46 chr18 512673 512712 -85476222 - MIR SINE MIR -153 55 18 357 337 55 6 chr18 512891 513072 -85475862 - MIR SINE MIR -65 197 8 225 273 91 0 chr18 513593 513659 -85475275 + L2 LINE L2 3204 3275 -38 1679 104 67 127 chr18 513681 513997 -85474937 + Tigger3(Golem) DNA MER2_type 2 2978 -51 2513 85 0 0 chr18 514113 514418 -85474516 - AluSg SINE Alu -5 305 1 519 263 160 0 chr18 515175 515331 -85473603 + MER5A DNA MER1_type 9 189 0 332 273 124 0 chr18 515337 515458 -85473476 - MIR3 SINE MIR -33 175 40 559 167 10 0 chr18 517383 517485 -85471449 - AluSg/x SINE Alu -6 306 204 255 31 0 0 chr18 517991 518023 -85470911 + (CA)n Simple_repeat Simple_repeat 2 33 0 2235 74 0 81 chr18 518051 518374 -85470560 - AluY SINE Alu -14 297 1 2102 130 7 0 chr18 519275 519575 -85469359 + AluSx SINE Alu 1 302 -10 193 348 170 7 chr18 521113 521248 -85467686 + MIR SINE MIR 33 144 -64 208 345 26 9 chr18 522327 522443 -85466491 + L2 LINE L2 2866 2983 -289 259 328 24 32 chr18 523464 523589 -85465345 - MIR3 SINE MIR -44 164 41 230 0 33 0 chr18 523714 523744 -85465190 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 243 225 70 28 chr18 525407 525478 -85463456 - MER91A DNA MER1_type -3 193 120 706 236 66 54 chr18 526307 526565 -85462369 - Charlie7 DNA MER1_type -2036 576 316 292 269 115 19 chr18 528289 528393 -85460541 - L2 LINE L2 0 3313 3200 1365 117 62 34 chr18 530842 531233 -85457701 - MER51A LTR ERV1 0 634 1 3716 104 98 30 chr18 533331 534387 -85454547 + MER11A LTR ERVK 1 1232 -4 2944 75 8 0 chr18 534638 535023 -85453911 + MER41A LTR ERV1 1 388 -166 2913 22 0 0 chr18 535023 535341 -85453593 + AluYb8 SINE Alu 1 318 0 1748 165 10 95 chr18 536044 536443 -85452491 + MLT1A1 LTR MaLR 1 365 0 196 344 44 0 chr18 536972 537062 -85451872 + MIR SINE MIR 134 227 -35 1300 171 0 32 chr18 537314 537560 -85451374 + AluJb SINE Alu 65 302 -10 1289 174 24 5 chr18 537714 537926 -85451008 + MER58A DNA MER1_type 3 218 -6 2375 108 3 0 chr18 537982 538289 -85450645 + AluSq SINE Alu 1 308 -5 602 191 7 52 chr18 538862 538998 -85449936 + FLAM_A SINE Alu 1 130 -12 1671 160 12 1 chr18 539121 539419 -85449515 + L1MC2 LINE L1 5672 5829 -322 400 212 0 0 chr18 539419 539485 -85449449 + AluJ/FLAM SINE Alu 1 66 -236 3433 197 39 20 chr18 539644 540409 -85448525 + L1MC3 LINE L1 5932 6137 -207 1547 160 23 0 chr18 540418 540680 -85448254 + L1MC3 LINE L1 6996 7263 -522 1486 105 5 0 chr18 540680 540880 -85448054 + AluSp SINE Alu 111 311 -2 962 161 11 6 chr18 540903 541083 -85447851 + L1MC3 LINE L1 7605 7785 0 591 226 80 147 chr18 541086 541400 -85447534 - LTR37B LTR ERV1 -166 302 10 2258 135 47 3 chr18 541697 542059 -85446875 - L1PB4 LINE L1 -2 6154 5777 767 316 24 4 chr18 543742 543992 -85444942 - ERVL LTR ERVL -958 4806 4552 306 288 0 14 chr18 544083 544156 -85444778 - ERVL LTR ERVL -1180 4305 4234 582 329 76 30 chr18 544162 544530 -85444404 - ERVL LTR ERVL -1660 4104 3720 270 0 0 0 chr18 545280 545310 -85443624 + (GA)n Simple_repeat Simple_repeat 1 30 0 832 132 6 78 chr18 545772 545939 -85442995 + L1PA16 LINE L1 6012 6166 0 648 240 31 70 chr18 546511 546916 -85442018 - MLT1J1 LTR MaLR -5 441 12 465 277 209 23 chr18 547043 547263 -85441671 - MIR SINE MIR 0 262 2 732 233 25 0 chr18 547724 547887 -85441047 - LTR33 LTR ERVL -354 167 1 1941 137 3 31 chr18 547987 548308 -85440626 - AluJb SINE Alu 0 312 1 442 274 0 0 chr18 548598 548715 -85440219 - L2 LINE L2 -7 3306 3190 2985 110 16 21 chr18 548767 549203 -85439731 - MER57B LTR ERV1 0 434 1 360 85 0 0 chr18 549380 549427 -85439507 - MADE1 DNA Mariner -33 47 1 258 286 165 8 chr18 549734 549867 -85439067 + MIR SINE MIR 53 206 -56 2209 100 10 3 chr18 549879 550168 -85438766 + AluSg SINE Alu 1 291 -19 252 0 0 0 chr18 550469 550497 -85438437 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 5326 44 11 1 chr18 550497 551150 -85437784 - L1PA8 LINE L1 -16 6156 5498 2421 84 0 0 chr18 551160 551459 -85437475 - AluY SINE Alu -12 299 1 1940 134 14 17 chr18 551941 552231 -85436703 - AluSx SINE Alu -23 289 1 206 351 18 30 chr18 552231 552399 -85436535 - L2 LINE L2 -250 3022 2857 1554 156 102 0 chr18 552407 552682 -85436252 - MER7A DNA MER2_type -1 345 45 22 35 0 0 chr18 552924 552953 -85435981 + AT_rich Low_complexity Low_complexity 1 29 0 1742 157 25 14 chr18 552953 553234 -85435700 - AluJo SINE Alu -28 284 1 2362 89 0 0 chr18 553443 553735 -85435199 - AluSx SINE Alu -20 292 1 916 272 118 28 chr18 554624 555452 -85433482 - L1MC4a LINE L1 -374 5790 4919 2294 84 0 3 chr18 555452 555760 -85433174 - AluSq SINE Alu 0 307 1 916 272 118 28 chr18 555760 555998 -85432936 - L1MC4a LINE L1 -1245 4919 4704 751 212 55 63 chr18 555987 556242 -85432692 - L1MEc LINE L1 -985 5230 4978 * 10546 95 45 229 chr18 556243 556446 -85432488 - Tigger1 DNA MER2_type 0 2418 2179 2025 159 0 0 chr18 556446 556755 -85432179 + AluJb SINE Alu 2 310 -2 10546 95 45 229 chr18 556755 556811 -85432123 - Tigger1 DNA MER2_type -239 2179 2114 2134 127 0 0 chr18 556811 557103 -85431831 - AluSx SINE Alu -20 292 1 10546 95 45 229 chr18 557103 557680 -85431254 - Tigger1 DNA MER2_type -304 2114 1432 2490 68 7 7 chr18 557680 557987 -85430947 - AluSp SINE Alu -6 307 1 826 140 7 7 chr18 557991 558127 -85430807 - FLAM_C SINE Alu -5 138 3 10546 95 45 229 chr18 558127 559070 -85429864 - Tigger1 DNA MER2_type -989 1429 313 1303 184 0 17 chr18 559070 559303 -85429631 + AluJb SINE Alu 84 312 0 10546 95 45 229 chr18 559303 559451 -85429483 - Tigger1 DNA MER2_type -2105 313 139 875 170 7 7 chr18 559451 559598 -85429336 + FRAM SINE Alu 6 152 -24 10546 95 45 229 chr18 559598 560048 -85428886 - Tigger1 DNA MER2_type -2279 139 76 1621 161 26 36 chr18 560048 560353 -85428581 + AluJb SINE Alu 1 302 -10 10546 95 45 229 chr18 560353 560418 -85428516 - Tigger1 DNA MER2_type -2342 76 1 6195 235 57 58 chr18 560436 561095 -85427839 - L1MEc LINE L1 -1254 4961 4303 2146 106 14 3 chr18 561095 561379 -85427555 - AluSc SINE Alu -22 287 1 6195 235 57 58 chr18 561379 561870 -85427064 - L1MEc LINE L1 -1912 4303 3813 2153 132 0 10 chr18 561870 562173 -85426761 - AluSx SINE Alu -12 300 1 6195 235 57 58 chr18 562173 562595 -85426339 - L1MEc LINE L1 -2402 3813 3392 1734 144 43 22 chr18 562595 562872 -85426062 - AluJo SINE Alu -28 284 2 6195 235 57 58 chr18 562872 563278 -85425656 - L1MEc LINE L1 -2823 3392 2987 1826 188 0 0 chr18 563278 563586 -85425348 - AluJb SINE Alu -4 308 1 6195 235 57 58 chr18 563586 564295 -85424639 - L1MEc LINE L1 -3228 2987 2272 1222 179 155 0 chr18 564296 564548 -85424386 - AluJo SINE Alu -3 309 19 1342 199 0 0 chr18 564622 564893 -85424041 - L1MD3 LINE L1 -2 7993 7723 626 184 48 0 chr18 564916 565063 -85423871 - L1MEc LINE L1 -4127 2269 2116 512 172 166 37 chr18 565415 565578 -85423356 + MER69 DNA AcHobo 2093 2276 -250 779 171 16 0 chr18 565582 565711 -85423223 + AluJb SINE Alu 2 132 -180 567 205 226 16 chr18 565711 565901 -85423033 + MER69 DNA AcHobo 2270 2499 -27 219 36 0 0 chr18 566021 566049 -85422885 + (CA)n Simple_repeat Simple_repeat 1 28 0 30 0 0 0 chr18 566360 566390 -85422544 + AT_rich Low_complexity Low_complexity 1 30 0 228 380 28 34 chr18 567828 568007 -85420927 + MIR SINE MIR 33 210 -52 261 313 36 0 chr18 568401 568513 -85420421 + MIR3 SINE MIR 90 205 -3 2251 89 3 30 chr18 568521 568849 -85420085 - AluSq SINE Alu 0 313 1 2659 170 48 24 chr18 568937 569479 -85419455 - L1MD1 LINE L1 -5 6631 6077 691 194 65 0 chr18 569482 569606 -85419328 - FLAM_C SINE Alu -10 133 2 2243 190 5 0 chr18 569611 570016 -85418918 - L1MD1 LINE L1 -551 6085 5679 * 5111 181 63 20 chr18 570009 571308 -85417626 - L1MD1 LINE L1 -3818 2722 1375 1047 179 0 6 chr18 571366 571534 -85417400 - AluJb SINE Alu -145 167 1 2100 196 26 7 chr18 571566 572019 -85416915 - L1MD1 LINE L1 -5194 1346 885 1883 232 139 20 chr18 572051 572433 -85416501 - L1MD1 LINE L1 -5902 638 168 2133 87 56 3 chr18 572433 572720 -85416214 + AluSq SINE Alu 2 303 -10 1883 232 139 20 chr18 572720 572892 -85416042 - L1MD1 LINE L1 -6372 168 18 604 243 96 0 chr18 573027 573204 -85415730 - MIR SINE MIR -21 241 48 2008 106 57 0 chr18 573615 573898 -85415036 - AluSq SINE Alu -14 299 1 2094 129 7 16 chr18 574021 574331 -85414603 + AluSx SINE Alu 1 307 -5 209 283 0 0 chr18 574501 574554 -85414380 + T-rich Low_complexity Low_complexity 5 57 0 627 230 43 19 chr18 575172 575333 -85413601 - MER5B DNA MER1_type -4 174 10 1647 231 74 50 chr18 575383 575885 -85413049 + MLT2B1 LTR ERVL 7 520 0 1298 139 0 0 chr18 576441 576635 -85412299 - MER41A LTR ERV1 0 554 361 2380 77 7 7 chr18 577025 577335 -85411599 + AluSx SINE Alu 2 311 -1 196 318 48 0 chr18 578733 578796 -85410138 + L2 LINE L2 2243 2308 -1006 262 201 236 62 chr18 578809 579068 -85409866 - L1M4 LINE L1 -2753 3393 3090 4565 140 57 12 chr18 579183 579932 -85409002 + LTR39 LTR ERV1 1 783 0 2999 84 31 67 chr18 580148 580671 -85408263 + Tigger3(Golem) DNA MER2_type 2241 2744 -285 1108 161 0 0 chr18 580779 580941 -85407993 + AluSg/x SINE Alu 119 280 -30 288 70 0 0 chr18 580944 580987 -85407947 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2429 87 0 3 chr18 581103 581413 -85407521 + AluY SINE Alu 1 309 -2 1821 157 0 40 chr18 581541 581866 -85407068 + AluJb SINE Alu 1 312 0 2492 50 0 0 chr18 582591 582873 -85406061 + AluY SINE Alu 12 293 -18 1561 190 27 33 chr18 583805 584142 -85404792 - MER21B LTR ERV1 -11 852 518 240 35 0 0 chr18 584255 584284 -85404650 + (TA)n Simple_repeat Simple_repeat 1 29 0 203 221 115 67 chr18 584700 584804 -85404130 + MIR3 SINE MIR 91 199 -9 21 36 0 0 chr18 584899 584927 -85404007 + AT_rich Low_complexity Low_complexity 1 28 0 2237 86 10 0 chr18 584977 585268 -85403666 - AluSp SINE Alu -19 294 1 235 300 43 0 chr18 585613 585683 -85403251 + MIR3 SINE MIR 112 184 -24 203 247 151 0 chr18 585833 585906 -85403028 + L2 LINE L2 3230 3313 0 2247 90 3 3 chr18 585989 586302 -85402632 - AluSg SINE Alu 0 310 1 259 311 91 15 chr18 586406 586538 -85402396 + MIR SINE MIR 84 225 -37 1547 170 28 17 chr18 586654 586943 -85401991 - AluJo SINE Alu -20 292 1 2177 86 46 0 chr18 587823 588103 -85400831 - AluSg SINE Alu -17 293 1 1172 152 38 0 chr18 588155 588365 -85400569 - MER2 DNA MER2_type 0 345 128 892 179 7 0 chr18 588365 588516 -85400418 + AluJb SINE Alu 148 299 -13 372 189 9 123 chr18 588545 588651 -85400283 - MER2 DNA MER2_type -248 97 4 6655 65 12 40 chr18 588821 589736 -85399198 - SVA Other Other -339 1047 159 26 88 0 0 chr18 590001 590069 -85398865 + GC_rich Low_complexity Low_complexity 1 68 0 250 276 35 24 chr18 590110 590280 -85398654 + C-rich Low_complexity Low_complexity 6 177 0 213 132 0 0 chr18 591204 591242 -85397692 + (T)n Simple_repeat Simple_repeat 1 38 0 1998 65 0 8 chr18 591449 591695 -85397239 - AluSg SINE Alu -66 244 1 1949 129 54 0 chr18 591707 592002 -85396932 - AluSx SINE Alu -1 311 1 4704 161 49 27 chr18 592038 592863 -85396071 + L1MB3 LINE L1 5096 5954 -229 2223 101 3 3 chr18 592863 593161 -85395773 + AluSg SINE Alu 2 299 -11 4704 161 49 27 chr18 593161 593396 -85395538 + L1MB3 LINE L1 5954 6182 -1 1580 169 77 0 chr18 593545 593817 -85395117 + AluJo SINE Alu 1 293 -19 183 156 0 0 chr18 594029 594061 -85394873 + GA-rich Low_complexity Low_complexity 1 32 0 414 263 86 22 chr18 594270 594502 -85394432 + L2 LINE L2 2445 2691 -623 650 242 147 0 chr18 594502 594700 -85394234 + L1MEc LINE L1 149 375 -6021 180 213 128 106 chr18 595569 595663 -85393271 - L2 LINE L2 0 3272 3177 188 250 36 0 chr18 595971 596027 -85392907 + MER5A DNA MER1_type 129 186 -3 1550 147 12 23 chr18 596195 596453 -85392481 + AluJb SINE Alu 12 266 -46 515 124 22 0 chr18 596721 596810 -85392124 + (TATATG)n Simple_repeat Simple_repeat 6 96 0 2394 88 0 7 chr18 598686 598993 -85389941 + AluSq SINE Alu 1 305 -8 247 302 54 16 chr18 599085 599214 -85389720 - MIR SINE MIR -10 252 119 1891 108 29 14 chr18 599648 599926 -85389008 + AluSg SINE Alu 1 282 -28 342 0 0 0 chr18 599926 599964 -85388970 + (CA)n Simple_repeat Simple_repeat 2 39 0 206 143 57 0 chr18 601381 601416 -85387518 - L2 LINE L2 -16 3256 3220 477 254 6 28 chr18 601416 601542 -85387392 - MIR SINE MIR -9 253 29 441 257 136 7 chr18 602816 602956 -85385978 + MIR SINE MIR 87 244 -18 338 321 95 36 chr18 603637 603805 -85385129 - L2 LINE L2 0 3272 3095 2061 158 3 0 chr18 605059 605370 -85383564 - AluSx SINE Alu 0 312 1 360 226 9 22 chr18 605376 605488 -85383446 - MIR SINE MIR -67 141 45 486 247 181 0 chr18 605515 605681 -85383253 + HAL1 LINE L1 179 374 -2133 * 3585 167 25 20 chr18 605678 606362 -85382572 + L1MB8 LINE L1 5465 6151 -27 3465 243 79 34 chr18 606396 607014 -85381920 + HAL1 LINE L1 405 993 -1514 2257 122 0 0 chr18 607014 607317 -85381617 + AluSx SINE Alu 1 303 -9 3465 243 79 34 chr18 607317 607461 -85381473 + HAL1 LINE L1 993 1129 -1378 2345 98 0 46 chr18 607461 607787 -85381147 + AluSx SINE Alu 1 311 -1 3465 243 79 34 chr18 607787 608297 -85380637 + HAL1 LINE L1 1129 1736 -771 192 184 0 0 chr18 608297 608346 -85380588 + (TG)n Simple_repeat Simple_repeat 2 50 0 1104 264 81 40 chr18 608377 608824 -85380110 + HAL1 LINE L1 1882 2346 -161 458 226 87 31 chr18 608883 609078 -85379856 + MLT1H LTR MaLR 100 305 -244 368 259 154 12 chr18 609125 609287 -85379647 + MLT1H LTR MaLR 409 593 -2 395 209 22 143 chr18 609292 609474 -85379460 + HAL1 LINE L1 2346 2505 -2 295 211 0 53 chr18 612044 612120 -85376814 - AluJ/FLAM SINE Alu -230 72 1 2436 84 0 3 chr18 612248 612557 -85376377 - AluY SINE Alu -3 308 1 324 64 0 0 chr18 612673 612720 -85376214 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 2172 122 0 0 chr18 612723 613011 -85375923 - AluSx SINE Alu -24 288 1 212 279 15 15 chr18 613015 613083 -85375851 + MIR3 SINE MIR 114 181 -27 301 286 120 0 chr18 613698 613831 -85375103 - L2 LINE L2 -1 3312 3164 2063 116 3 3 chr18 613840 614133 -85374801 + AluSx SINE Alu 1 293 -19 855 287 72 47 chr18 614164 614610 -85374324 - MLT1K LTR MaLR -6 582 126 522 251 148 20 chr18 614768 614971 -85373963 + MIR SINE MIR 1 229 -33 188 325 25 12 chr18 614990 615070 -85373864 - L2 LINE L2 -219 3053 2973 1597 146 41 82 chr18 615512 615629 -85373305 + AluJo SINE Alu 1 121 -196 191 36 36 0 chr18 615629 615657 -85373277 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 1597 146 41 82 chr18 615657 615868 -85373066 + AluJo SINE Alu 121 317 0 612 224 12 43 chr18 616295 616456 -85372478 - MIR SINE MIR -91 171 16 2598 53 0 3 chr18 616767 617071 -85371863 - AluY SINE Alu -8 303 1 2236 130 122 8 chr18 617159 617543 -85371391 - MSTA LTR MaLR 0 428 1 562 107 0 24 chr18 617604 617688 -85371246 + AluJ/FRAM SINE Alu 217 298 -14 209 189 0 0 chr18 617775 617812 -85371122 + (TG)n Simple_repeat Simple_repeat 2 38 0 198 0 0 0 chr18 617812 617834 -85371100 + (GA)n Simple_repeat Simple_repeat 1 22 0 619 283 93 17 chr18 618439 618676 -85370258 + MIR SINE MIR 7 261 -1 2183 198 40 92 chr18 618940 619279 -85369655 + LTR9 LTR ERV1 1 294 -318 2231 79 7 0 chr18 619279 619596 -85369338 + AluSp SINE Alu 3 321 0 2183 198 40 92 chr18 619596 619900 -85369034 + LTR9 LTR ERV1 294 612 0 2195 112 0 7 chr18 620023 620328 -85368606 + AluY SINE Alu 1 303 -8 475 273 35 14 chr18 620378 620521 -85368413 - MIR SINE MIR 0 262 117 2179 126 0 0 chr18 620594 620888 -85368046 - AluSx SINE Alu -18 294 1 2320 164 26 7 chr18 621164 621579 -85367355 + L1MB3 LINE L1 5716 6138 -45 1126 169 0 0 chr18 621579 621751 -85367183 + FRAM SINE Alu 1 171 -5 431 141 0 0 chr18 621751 621822 -85367112 + AluSc SINE Alu 234 304 -5 2009 143 3 10 chr18 622198 622505 -85366429 + AluJo SINE Alu 1 305 -7 208 264 28 42 chr18 623105 623177 -85365757 + C-rich Low_complexity Low_complexity 3 73 0 216 325 26 18 chr18 623562 623676 -85365258 - MIR SINE MIR -107 155 41 1039 169 6 0 chr18 624639 624799 -85364135 + AluJb SINE Alu 136 296 -16 2452 104 0 0 chr18 625437 625745 -85363189 - AluSq SINE Alu -5 308 1 1316 139 0 54 chr18 625747 625970 -85362964 - AluJb SINE Alu -16 296 86 2267 104 0 10 chr18 626132 626430 -85362504 + AluSg SINE Alu 1 295 -15 43931 30 22 1 chr18 626432 632457 -85356477 + L1HS LINE L1 2 6155 0 247 200 92 0 chr18 632786 632851 -85356083 - MER45A DNA AcHobo -7 171 101 2195 122 3 0 chr18 632851 633162 -85355772 + AluSx SINE Alu 1 312 0 229 82 41 0 chr18 633181 633230 -85355704 + A-rich Low_complexity Low_complexity 4 54 0 292 400 0 0 chr18 634039 634189 -85354745 + MIR3 SINE MIR 30 179 -29 303 319 43 9 chr18 634969 635085 -85353849 + MIR SINE MIR 28 147 -115 1967 176 0 0 chr18 635115 635417 -85353517 - AluJb SINE Alu -10 302 1 2811 121 16 16 chr18 635534 635964 -85352970 - Tigger2a DNA MER2_type 0 434 5 228 246 35 0 chr18 636293 636350 -85352584 + L2 LINE L2 3121 3179 -93 2682 94 0 0 chr18 637019 637371 -85351563 - THE1A LTR MaLR -3 352 1 11624 97 7 9 chr18 637371 638586 -85350348 - THE1A-int LTR MaLR 0 1580 368 2083 100 7 23 chr18 638586 638886 -85350048 + AluSg SINE Alu 1 295 -15 11624 97 7 9 chr18 638886 639254 -85349680 - THE1A-int LTR MaLR -1212 368 1 2868 70 0 0 chr18 639254 639609 -85349325 - THE1A LTR MaLR 0 355 1 1657 135 10 61 chr18 640175 640340 -85348594 - AluJo SINE Alu -11 301 156 2388 92 0 0 chr18 640340 640634 -85348300 - AluSx SINE Alu -18 294 1 1657 135 10 61 chr18 640634 640764 -85348170 - AluJo SINE Alu -156 156 21 201 74 0 0 chr18 641495 641522 -85347412 + (A)n Simple_repeat Simple_repeat 1 27 0 717 168 8 0 chr18 641974 642093 -85346841 - FLAM_C SINE Alu -22 121 2 1327 191 23 0 chr18 642520 642776 -85346158 + L1MB3 LINE L1 5920 6181 -2 1667 243 56 10 chr18 642789 643292 -85345642 + Charlie7 DNA MER1_type 1714 2239 -373 2160 181 168 196 chr18 643324 643587 -85345347 + L1MD3 LINE L1 6620 6889 -1101 1084 126 5 40 chr18 643587 643786 -85345148 + L1PB1 LINE L1 5959 6150 -1 2160 181 168 196 chr18 643786 644043 -85344891 + L1MD3 LINE L1 6889 7152 -838 305 198 28 113 chr18 644043 644149 -85344785 + MLT1F1 LTR MaLR 35 131 -436 2160 181 168 196 chr18 644149 644705 -85344229 + L1MD3 LINE L1 7152 7943 -47 1536 186 3 55 chr18 644705 645017 -85343917 - AluJb SINE Alu -16 296 1 2160 181 168 196 chr18 645017 645064 -85343870 + L1MD3 LINE L1 7943 7990 0 2009 124 13 20 chr18 645067 645373 -85343561 + AluSx SINE Alu 1 304 -8 485 256 97 31 chr18 645373 645724 -85343210 + Charlie7 DNA MER1_type 2239 2612 0 436 267 0 48 chr18 645785 645931 -85343003 + MIR SINE MIR 85 223 -39 29 0 0 0 chr18 646775 646804 -85342130 + AT_rich Low_complexity Low_complexity 1 29 0 243 0 0 0 chr18 646945 646972 -85341962 + (TG)n Simple_repeat Simple_repeat 1 27 0 1236 101 28 0 chr18 647546 647724 -85341210 + L1MA1 LINE L1 6116 6298 -4 29 0 0 0 chr18 647724 647753 -85341181 + AT_rich Low_complexity Low_complexity 1 29 0 2207 106 7 3 chr18 647940 648243 -85340691 + AluSq SINE Alu 2 305 -8 220 305 24 0 chr18 648557 648639 -85340295 - L2 LINE L2 -1 3271 3188 216 87 0 87 chr18 648699 648745 -85340189 - L2 LINE L2 -1 3312 3271 2538 36 30 0 chr18 649389 649691 -85339243 - AluY SINE Alu 0 311 1 252 86 0 0 chr18 649785 649820 -85339114 + (TA)n Simple_repeat Simple_repeat 2 36 0 304 200 0 67 chr18 649841 649931 -85339003 - L1MC4 LINE L1 -1345 6697 6614 288 0 0 0 chr18 649932 650033 -85338901 + (CA)n Simple_repeat Simple_repeat 1 133 0 288 0 0 0 chr18 650033 650065 -85338869 + (CA)n Simple_repeat Simple_repeat 2 33 0 250 170 0 0 chr18 650145 650192 -85338742 - LTR66 LTR ERVL -172 438 392 * 691 184 48 30 chr18 650188 650356 -85338578 + Charlie7 DNA MER1_type 2136 2306 -306 2531 45 3 0 chr18 650376 650684 -85338250 - AluY SINE Alu -2 309 1 1128 37 0 0 chr18 650863 650998 -85337936 + AluY SINE Alu 174 308 -3 582 264 58 96 chr18 651054 651627 -85337307 + L1ME3A LINE L1 3117 3667 -2479 738 273 55 58 chr18 651667 651981 -85336953 + L1ME3A LINE L1 4176 4488 -1658 2258 110 3 0 chr18 651981 652273 -85336661 - AluSq SINE Alu -20 293 1 738 273 55 58 chr18 652273 652578 -85336356 + L1ME3A LINE L1 4488 4793 -1353 378 242 118 70 chr18 652587 652847 -85336087 + L1ME3A LINE L1 4876 5149 -997 2823 112 147 13 chr18 652855 653319 -85335615 + MER1A DNA MER1_type 1 526 -1 1439 152 95 24 chr18 653353 653649 -85335285 - MER44D DNA MER2_type 0 609 23 646 286 110 62 chr18 653723 654223 -85334711 - MLT1H1 LTR MaLR 0 555 32 539 258 146 26 chr18 654280 654906 -85334028 + L1ME3A LINE L1 5235 5962 -208 1802 141 4 19 chr18 655215 655485 -85333449 - AluSx SINE Alu -46 266 1 360 219 167 0 chr18 655633 655747 -85333187 + L1MC5 LINE L1 7721 7853 -108 270 0 0 0 chr18 656112 656142 -85332792 + (CTG)n Simple_repeat Simple_repeat 1 30 0 386 283 39 54 chr18 656472 656677 -85332257 + L2 LINE L2 2866 3067 -205 2165 114 0 3 chr18 657342 657632 -85331302 + AluSx SINE Alu 5 293 -19 369 27 206 110 chr18 658686 658759 -85330175 - MADE1 DNA Mariner 0 80 1 327 309 70 15 chr18 658776 658977 -85329957 - MIR SINE MIR -45 217 6 259 280 75 0 chr18 659029 659122 -85329812 + MLT1J LTR MaLR 43 142 -369 367 348 43 16 chr18 659184 659371 -85329563 - LTR16C LTR ERVL 0 491 300 2344 109 0 3 chr18 660061 660372 -85328562 + AluSq SINE Alu 1 310 -3 367 257 21 69 chr18 660653 660797 -85328137 - MIR SINE MIR -119 143 7 1915 146 10 3 chr18 660928 661223 -85327711 + AluJo SINE Alu 1 297 -15 250 235 49 29 chr18 661271 661373 -85327561 + MIR SINE MIR 109 212 -50 358 283 144 12 chr18 661398 661571 -85327363 - MIR SINE MIR -25 237 42 1664 168 0 56 chr18 662077 662223 -85326711 + AluJb SINE Alu 1 123 -189 2215 128 0 0 chr18 662223 662528 -85326406 + AluSq SINE Alu 1 305 -8 1664 168 0 56 chr18 662528 662685 -85326249 + AluJb SINE Alu 123 287 -25 23 0 0 0 chr18 662686 662709 -85326225 + AT_rich Low_complexity Low_complexity 1 23 0 185 62 0 31 chr18 664281 664313 -85324621 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 954 167 67 17 chr18 666517 666694 -85322240 - MER50 LTR ERV1 0 734 549 785 235 21 89 chr18 666694 666975 -85321959 + LTR9 LTR ERV1 1 262 -350 2360 88 0 0 chr18 666976 667271 -85321663 + AluSg SINE Alu 1 295 -15 294 50 0 0 chr18 667282 667322 -85321612 + (GGAA)n Simple_repeat Simple_repeat 4 43 0 1187 233 68 21 chr18 667322 667683 -85321251 + LTR19C LTR ERV1 220 779 0 2277 216 44 9 chr18 667684 668212 -85320722 - MER50 LTR ERV1 -188 546 1 291 311 10 29 chr18 668309 668412 -85320522 + MIR SINE MIR 46 146 -116 227 258 30 0 chr18 668933 668999 -85319935 - MIR SINE MIR -102 106 39 210 179 0 71 chr18 669358 669414 -85319520 - L2 LINE L2 0 3313 3262 1973 155 0 0 chr18 669414 669724 -85319210 - AluSx SINE Alu -2 310 1 1398 158 11 42 chr18 670589 670849 -85318085 + AluJb SINE Alu 1 252 -60 230 81 27 0 chr18 670856 670893 -85318041 + (GA)n Simple_repeat Simple_repeat 2 39 0 28 0 0 0 chr18 671165 671193 -85317741 + GC_rich Low_complexity Low_complexity 1 28 0 2215 117 0 0 chr18 674002 674300 -85314634 + AluSx SINE Alu 1 298 -14 1268 277 26 22 chr18 674621 675036 -85313898 - LTR16A LTR ERVL 0 450 34 2208 102 27 0 chr18 675133 675428 -85313506 - AluY SINE Alu -8 303 1 1745 172 0 30 chr18 675761 676063 -85312871 - AluJb SINE Alu -19 293 1 542 307 107 18 chr18 676172 676508 -85312426 - MERVL LTR ERVL -599 4886 4663 319 341 58 18 chr18 676575 676801 -85312133 - MERVL LTR ERVL -740 4549 4022 2214 105 0 0 chr18 677020 677305 -85311629 - AluSx SINE Alu -19 293 9 1818 128 67 78 chr18 677305 677445 -85311489 - L1MCa LINE L1 -4434 2130 1990 968 83 4 200 chr18 677445 677685 -85311249 - 7SK RNA RNA 0 193 1 1818 128 67 78 chr18 677685 677788 -85311146 - L1MCa LINE L1 -4574 1990 1887 1548 128 0 0 chr18 677788 678007 -85310927 - AluSg/x SINE Alu -12 298 80 1818 128 67 78 chr18 678007 678380 -85310554 - L1MCa LINE L1 -4677 1887 1413 6289 115 17 11 chr18 678393 679370 -85309564 - L1MA4A LINE L1 -5 6298 5316 759 195 83 22 chr18 679363 679640 -85309294 - L1MCa LINE L1 -5132 1432 1139 * 493 241 0 0 chr18 679656 679947 -85308987 - FLAM_A SINE Alu 0 142 27 3327 186 82 42 chr18 679996 680852 -85308082 - L1MCa LINE L1 -4850 1195 306 565 187 24 31 chr18 680870 680999 -85307935 - L1MCa LINE L1 -5921 281 3 2849 214 31 15 chr18 681008 681727 -85307207 - L1MDa LINE L1 -1767 4773 4044 1375 82 6 0 chr18 681727 681897 -85307037 - AluSg/x SINE Alu -11 299 129 315 190 0 0 chr18 681897 681955 -85306979 - L1MDa LINE L1 -2484 4056 3999 1178 151 134 22 chr18 681955 682187 -85306747 - AluJo SINE Alu -14 298 41 3293 214 60 59 chr18 682188 682279 -85306655 - L1MDa LINE L1 -2535 4005 3916 2308 94 0 16 chr18 682279 682587 -85306347 - AluSq SINE Alu -10 303 1 3293 214 60 59 chr18 682587 682835 -85306099 - L1MDa LINE L1 -2624 3916 3670 288 0 0 0 chr18 682835 682867 -85306067 + (TC)n Simple_repeat Simple_repeat 2 33 0 3293 214 60 59 chr18 682867 683945 -85304989 - L1MDa LINE L1 -2870 3670 2566 2020 106 44 0 chr18 683945 684220 -85304714 - AluSx SINE Alu -23 289 3 3293 214 60 59 chr18 684220 684936 -85303998 - L1MDa LINE L1 -3974 2566 1852 185 65 32 0 chr18 684959 684990 -85303944 + (TAAAAA)n Simple_repeat Simple_repeat 3 34 0 532 338 141 3 chr18 685055 685437 -85303497 + L3 LINE CR1 1063 1497 -80 572 274 27 0 chr18 685773 685919 -85303015 - MIR SINE MIR -107 155 6 702 315 102 29 chr18 686005 686418 -85302516 - MARNA DNA Mariner -76 510 68 342 258 86 26 chr18 686654 686805 -85302129 + MIR SINE MIR 37 196 -66 483 250 41 59 chr18 687409 687629 -85301305 + Charlie8 DNA MER1_type 75 290 -2127 201 222 12 84 chr18 687650 687817 -85301117 + (CCCG)n Simple_repeat Simple_repeat 2 156 0 1997 113 63 0 chr18 688269 688553 -85300381 + AluSx SINE Alu 1 302 -10 433 264 66 47 chr18 690084 690296 -85298638 + MIR SINE MIR 47 262 0 25 0 0 28 chr18 690457 690476 -85298458 + AT_rich Low_complexity Low_complexity 1 20 -15 2371 73 0 51 chr18 690476 690790 -85298144 + AluY SINE Alu 1 298 -13 25 0 0 28 chr18 690790 690806 -85298128 + AT_rich Low_complexity Low_complexity 20 35 0 22 0 0 0 chr18 690954 690976 -85297958 + AT_rich Low_complexity Low_complexity 1 22 0 601 179 18 0 chr18 691726 691838 -85297096 + MER81 DNA DNA 1 114 0 2183 113 3 13 chr18 692187 692487 -85296447 + AluSx SINE Alu 1 297 -15 1260 128 0 0 chr18 692487 692666 -85296268 + AluSg/x SINE Alu 132 310 0 874 150 0 0 chr18 692766 692899 -85296035 + FLAM_C SINE Alu 1 133 0 261 343 65 0 chr18 692994 693102 -85295832 - L2 LINE L2 -9 3263 3149 378 204 99 56 chr18 693116 693258 -85295676 + LTR33 LTR ERVL 1 148 -373 296 242 63 0 chr18 693354 693449 -85295485 + LTR33 LTR ERVL 415 515 -6 514 222 23 29 chr18 693708 693879 -85295055 - L2 LINE L2 -435 2879 2710 455 248 183 0 chr18 693966 694119 -85294815 + MER5A DNA MER1_type 9 189 0 2436 190 71 58 chr18 694286 694727 -85294207 - L1MD2 LINE L1 -5 6354 5899 1854 139 4 4 chr18 694727 695000 -85293934 - AluJb SINE Alu -31 281 9 2436 190 71 58 chr18 695000 695232 -85293702 - L1MD2 LINE L1 -460 5899 5672 1752 153 101 12 chr18 695484 695900 -85293034 - MER61D LTR ERV1 0 501 1 295 163 0 2 chr18 696173 696416 -85292518 + AluJb SINE Alu 1 302 0 1805 158 40 0 chr18 696494 696792 -85292142 - AluJb SINE Alu -2 310 1 1183 164 10 87 chr18 697774 697953 -85290981 - AluJo SINE Alu 0 312 121 180 0 0 0 chr18 697953 697973 -85290961 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2043 124 0 3 chr18 697973 698256 -85290678 - AluSx SINE Alu -30 282 1 1183 164 10 87 chr18 698256 698271 -85290663 - AluJo SINE Alu -190 122 107 1547 176 35 14 chr18 698271 698555 -85290379 - AluJb SINE Alu -22 290 1 1183 164 10 87 chr18 698555 698694 -85290240 - AluJo SINE Alu -205 107 21 198 0 0 0 chr18 699328 699350 -85289584 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1022 194 0 0 chr18 699400 699565 -85289369 + FRAM SINE Alu 2 166 0 2467 131 37 0 chr18 699805 700188 -85288746 - Tigger4(Zombi) DNA MER2_type -1 2730 2334 1177 153 34 51 chr18 700191 700369 -85288565 - Tigger4(Zombi) DNA MER2_type -2500 231 56 2177 130 0 0 chr18 700369 700669 -85288265 + AluSx SINE Alu 1 300 -12 1177 153 34 51 chr18 700669 700725 -85288209 - Tigger4(Zombi) DNA MER2_type -2675 56 1 862 128 23 0 chr18 701580 701713 -85287221 + AluJb SINE Alu 1 136 -176 1057 167 0 0 chr18 702244 702400 -85286534 + FAM SINE Alu 3 158 -17 31 0 0 0 chr18 702406 702437 -85286497 + AT_rich Low_complexity Low_complexity 1 31 0 229 362 92 18 chr18 702466 702684 -85286250 - L2 LINE L2 -1244 2070 1837 589 270 123 65 chr18 702739 703252 -85285682 + L2 LINE L2 2383 3018 -295 779 198 102 0 chr18 703252 703409 -85285525 + MER45A DNA AcHobo 5 177 -1 589 270 123 65 chr18 703409 703586 -85285348 + L2 LINE L2 3018 3183 -130 2172 117 3 3 chr18 703962 704260 -85284674 - AluSx SINE Alu -13 299 2 2182 122 3 0 chr18 704282 704578 -85284356 - AluSx SINE Alu -15 297 1 203 315 33 11 chr18 704788 704880 -85284054 - MIR3 SINE MIR 0 208 115 635 79 18 26 chr18 705111 705225 -85283709 + (GGAA)n Simple_repeat Simple_repeat 3 115 0 28 29 0 0 chr18 707268 707303 -85281631 + AT_rich Low_complexity Low_complexity 1 35 0 2474 72 3 3 chr18 708142 708448 -85280486 + AluSp SINE Alu 2 307 -6 303 169 0 153 chr18 710516 710537 -85278397 - Charlie7 DNA MER1_type 0 2612 2589 2023 126 33 0 chr18 710537 710838 -85278096 - AluSx SINE Alu -1 311 1 303 169 0 153 chr18 710838 710934 -85278000 - Charlie7 DNA MER1_type -23 2589 2513 1598 239 60 22 chr18 710937 711401 -85277533 - Charlie7 DNA MER1_type -1923 689 208 25 31 0 0 chr18 711796 711828 -85277106 + AT_rich Low_complexity Low_complexity 1 32 0 1035 111 41 12 chr18 711836 712008 -85276926 - L1MB2 LINE L1 -5 6166 5990 833 131 8 16 chr18 713161 713283 -85275651 - FLAM_A SINE Alu -12 121 1 476 273 36 36 chr18 713592 713765 -85275169 - MIR SINE MIR -34 228 57 2217 130 0 0 chr18 713863 714163 -85274771 - AluSq SINE Alu -13 300 1 2235 115 0 0 chr18 714193 714497 -85274437 + AluSx SINE Alu 1 304 -8 209 164 18 18 chr18 715079 715134 -85273800 + (TTATA)n Simple_repeat Simple_repeat 1 55 0 326 325 0 0 chr18 715392 715472 -85273462 + L2 LINE L2 3234 3313 0 270 355 58 36 chr18 716081 716219 -85272715 + L2 LINE L2 3099 3239 -33 324 0 0 0 chr18 716346 716382 -85272552 + (CA)n Simple_repeat Simple_repeat 2 37 0 201 309 179 0 chr18 716772 716856 -85272078 + MIR SINE MIR 25 123 -85 1791 115 46 0 chr18 716929 717189 -85271745 - AluSq SINE Alu -7 306 35 2029 131 3 16 chr18 717398 717875 -85271059 + AluSx SINE Alu 1 312 0 2135 125 0 10 chr18 718649 718962 -85269972 - AluSx SINE Alu -2 310 1 2259 101 20 3 chr18 719462 719768 -85269166 - AluSq SINE Alu -2 311 1 1650 206 43 107 chr18 720813 720938 -85267996 + MLT1D LTR MaLR 1 132 -258 2318 111 0 0 chr18 720938 721244 -85267690 - AluSx SINE Alu -6 306 1 1650 206 43 107 chr18 721244 721511 -85267423 + MLT1D LTR MaLR 132 238 -152 1530 78 0 0 chr18 721511 721702 -85267232 - AluSc SINE Alu 0 309 119 1650 206 43 107 chr18 721702 721844 -85267090 + MLT1D LTR MaLR 238 388 -2 318 321 57 19 chr18 722453 722559 -85266375 - L2 LINE L2 -36 3236 3127 285 183 0 17 chr18 722627 722687 -85266247 - L2 LINE L2 -86 3227 3169 231 114 0 0 chr18 723156 723191 -85265743 + (TG)n Simple_repeat Simple_repeat 2 36 0 21 57 0 0 chr18 723306 723341 -85265593 + AT_rich Low_complexity Low_complexity 1 35 0 2133 108 3 7 chr18 723708 724004 -85264930 + AluSx SINE Alu 1 295 -17 1736 174 111 32 chr18 724333 724797 -85264137 - LTR10A LTR ERV1 -61 548 1 2183 75 18 14 chr18 724959 725239 -85263695 - AluSg SINE Alu -29 281 1 253 314 78 0 chr18 725854 725956 -85262978 + MIR3 SINE MIR 64 173 -35 1881 157 63 6 chr18 725977 726296 -85262638 - MER1B DNA MER1_type 0 337 1 2135 87 0 0 chr18 726577 726842 -85262092 - AluSg SINE Alu -45 265 1 291 250 106 19 chr18 726905 727009 -85261925 + L1ME4a LINE L1 5982 6094 -27 341 206 59 0 chr18 727010 727078 -85261856 - Tigger5 DNA MER2_type -1 2322 2251 333 200 0 0 chr18 727047 727102 -85261832 - Tigger5 DNA MER2_type -2268 55 1 * 2368 83 0 10 chr18 727508 727810 -85261124 + AluSg SINE Alu 1 299 -11 2090 127 3 7 chr18 728020 728319 -85260615 + AluSq SINE Alu 1 298 -15 2370 76 3 0 chr18 728404 728705 -85260229 - AluY SINE Alu -9 302 1 330 335 87 50 chr18 728769 728819 -85260115 + L2 LINE L2 2551 2598 -674 1860 157 3 32 chr18 728819 729132 -85259802 - AluJb SINE Alu -8 304 1 330 335 87 50 chr18 729132 729565 -85259369 + L2 LINE L2 2598 3051 -221 830 145 0 22 chr18 729780 729918 -85259016 - L1PB3 LINE L1 -3 6151 6017 736 201 7 7 chr18 730036 730180 -85258754 - L1PA16 LINE L1 -1 6165 6022 2377 93 3 0 chr18 730205 730506 -85258428 - AluSp SINE Alu -11 302 1 1027 106 0 0 chr18 730508 730640 -85258294 - AluSp SINE Alu -181 132 1 1354 124 68 174 chr18 731890 732038 -85256896 + MER2 DNA MER2_type 2 164 -181 183 42 0 0 chr18 732038 732062 -85256872 + (TTG)n Simple_repeat Simple_repeat 2 25 0 2117 133 0 0 chr18 732064 732357 -85256577 - AluSx SINE Alu -19 293 1 1354 124 68 174 chr18 732357 732387 -85256547 + MER2 DNA MER2_type 165 197 -148 3818 47 9 2 chr18 732387 732832 -85256102 + L1PA5 LINE L1 5707 6154 0 1354 124 68 174 chr18 732832 733029 -85255905 + MER2 DNA MER2_type 197 341 -4 2321 106 0 0 chr18 733058 733360 -85255574 - AluSq SINE Alu -11 302 1 1376 166 53 50 chr18 734187 734525 -85254409 + MER33 DNA MER1_type 1 324 0 225 247 153 12 chr18 734542 734627 -85254307 - MIR SINE MIR -9 253 157 240 167 0 0 chr18 734627 734675 -85254259 + T-rich Low_complexity Low_complexity 1 48 0 2137 131 0 3 chr18 734701 735006 -85253928 - AluSx SINE Alu -8 304 1 2713 33 0 0 chr18 735016 735322 -85253612 - AluY SINE Alu -4 307 2 431 286 8 24 chr18 735333 735459 -85253475 - MIR SINE MIR -133 129 6 204 284 37 12 chr18 736440 736521 -85252413 - MIR SINE MIR -123 139 57 325 250 119 54 chr18 736731 736899 -85252035 - MLT1L LTR MaLR -102 513 335 2108 127 0 10 chr18 736993 737293 -85251641 + AluSx SINE Alu 1 297 -15 951 310 154 37 chr18 737609 737814 -85251120 - L2 LINE L2 -64 3249 3069 1971 121 7 23 chr18 737814 738120 -85250814 - AluSx SINE Alu -11 301 1 951 310 154 37 chr18 738120 738759 -85250175 - L2 LINE L2 -244 3069 2301 2175 112 3 0 chr18 738759 739053 -85249881 + AluSx SINE Alu 1 295 -17 1436 118 98 0 chr18 739112 739358 -85249576 + L1MA8 LINE L1 6001 6270 -21 2084 143 0 0 chr18 739581 739881 -85249053 - AluSx SINE Alu -9 303 4 2019 158 0 7 chr18 740135 740433 -85248501 + AluSx SINE Alu 1 296 -16 180 310 42 14 chr18 740538 740609 -85248325 + L2 LINE L2 2689 2761 -553 417 294 35 161 chr18 741589 741954 -85246980 + L2 LINE L2 2851 3142 -130 1176 187 43 5 chr18 741954 742163 -85246771 + MER20 DNA MER1_type 1 217 -2 417 294 35 161 chr18 742163 742280 -85246654 + L2 LINE L2 3142 3272 0 2471 50 3 17 chr18 742669 742971 -85245963 - AluY SINE Alu -13 298 1 2268 109 0 13 chr18 743020 743333 -85245601 - AluSq SINE Alu -4 309 1 2166 138 0 0 chr18 743354 743666 -85245268 - AluSx SINE Alu 0 312 1 1949 162 16 22 chr18 743812 744176 -85244758 + L1MB8 LINE L1 5817 6178 0 2254 105 3 3 chr18 745062 745358 -85243576 - AluSx SINE Alu -16 296 1 795 206 17 120 chr18 745467 745759 -85243175 + L1MC4 LINE L1 7750 8011 -31 222 314 0 0 chr18 745850 745901 -85243033 + L2 LINE L2 3210 3260 -12 771 138 73 0 chr18 747732 747855 -85241079 + FLAM_A SINE Alu 11 142 0 2104 123 7 7 chr18 747856 748158 -85240776 + AluSx SINE Alu 1 302 -10 375 312 8 24 chr18 748267 748392 -85240542 + MIR SINE MIR 3 125 -137 25 31 0 0 chr18 748453 748485 -85240449 + AT_rich Low_complexity Low_complexity 1 32 0 221 203 24 49 chr18 748503 748626 -85240308 + (TA)n Simple_repeat Simple_repeat 1 120 0 2065 146 0 0 chr18 748626 748920 -85240014 - AluSg SINE Alu -16 294 1 810 123 0 36 chr18 750071 750209 -85238725 - FLAM_C SINE Alu 0 133 1 1546 179 33 4 chr18 750704 751024 -85237910 - AluJb SINE Alu 0 328 1 1265 165 23 5 chr18 751093 751311 -85237623 + AluJb SINE Alu 89 310 -2 1994 143 0 0 chr18 751348 751641 -85237293 + AluSx SINE Alu 1 293 -19 780 217 6 11 chr18 752038 752218 -85236716 - L1MC4 LINE L1 -374 7668 7490 1513 172 0 44 chr18 752912 753208 -85235726 - AluJo SINE Alu -5 307 25 323 335 62 6 chr18 753214 753375 -85235559 - MIR3 SINE MIR -9 199 30 2367 79 0 3 chr18 753421 753712 -85235222 + AluSq SINE Alu 1 290 -23 2462 79 0 3 chr18 753833 754137 -85234797 - AluY SINE Alu -8 303 1 21 0 0 0 chr18 754482 754503 -85234431 + AT_rich Low_complexity Low_complexity 1 21 0 305 125 306 0 chr18 754503 754575 -85234359 - MER58C DNA MER1_type -46 169 76 1220 168 5 5 chr18 754613 754809 -85234125 + AluJb SINE Alu 88 283 -29 438 233 11 0 chr18 754810 754900 -85234034 - MER58C DNA MER1_type -114 101 11 2174 132 0 0 chr18 755080 755375 -85233559 - AluSx SINE Alu -17 295 1 934 147 29 135 chr18 756027 756272 -85232662 + MER20 DNA MER1_type 1 219 0 1918 170 0 7 chr18 756351 756657 -85232277 - AluJb SINE Alu -8 304 1 4587 84 69 34 chr18 756714 756808 -85232126 - L1PB2 LINE L1 -2 6149 6060 1518 93 0 24 chr18 756808 757013 -85231921 - AluSg/x SINE Alu -12 298 99 4587 84 69 34 chr18 757013 757370 -85231564 - L1PB2 LINE L1 -91 6060 5661 2219 110 3 0 chr18 757370 757669 -85231265 - AluSx SINE Alu -12 300 1 4587 84 69 34 chr18 757669 757945 -85230989 - L1PB2 LINE L1 -490 5661 5396 2376 72 10 16 chr18 757965 758272 -85230662 - AluY SINE Alu -6 305 1 2064 127 0 0 chr18 758273 758548 -85230386 - AluSx SINE Alu -37 275 1 2644 62 0 0 chr18 758734 759043 -85229891 - AluY SINE Alu -2 309 1 2311 93 10 3 chr18 760082 760384 -85228550 - AluSx SINE Alu -4 308 5 2572 66 0 0 chr18 760557 760859 -85228075 - AluY SINE Alu -9 302 1 1851 243 106 21 chr18 761063 761734 -85227200 + L2 LINE L2 506 1233 -2081 1225 126 0 11 chr18 762027 762201 -85226733 + FRAM SINE Alu 1 165 -11 2377 91 0 0 chr18 762620 762918 -85226016 + AluSg SINE Alu 1 298 -12 2412 93 3 3 chr18 764019 764321 -85224613 + AluSx SINE Alu 1 302 -10 2184 109 3 3 chr18 764422 764715 -85224219 + AluSp SINE Alu 1 293 -20 1495 168 78 4 chr18 764922 765190 -85223744 + AluJb SINE Alu 1 288 -24 1972 147 0 10 chr18 765369 765669 -85223265 - AluSq SINE Alu -16 297 1 254 199 81 97 chr18 765930 766116 -85222818 + L1ME LINE L1 813 995 -5210 189 0 0 0 chr18 766117 766138 -85222796 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1128 107 0 0 chr18 766140 766290 -85222644 - AluSg/x SINE Alu -26 284 135 591 238 169 55 chr18 766293 766699 -85222235 + L1ME LINE L1 981 1339 -4876 2500 93 0 40 chr18 766699 766735 -85222199 + MER46B DNA MER2_type 1 37 -2694 2148 130 3 0 chr18 766735 767028 -85221906 + AluSg SINE Alu 1 294 -16 2500 93 0 40 chr18 767028 767223 -85221711 + MER46B DNA MER2_type 37 89 -2642 1829 135 50 3 chr18 767223 767505 -85221429 - AluJb SINE Alu -17 295 1 2500 93 0 40 chr18 767505 767647 -85221287 + MER46B DNA MER2_type 89 235 -1 591 238 169 55 chr18 767647 767714 -85221220 + L1ME LINE L1 1339 1508 -4707 735 250 128 35 chr18 767751 768416 -85220518 + L1ME LINE L1 1862 2555 -3660 2422 93 3 6 chr18 768749 769062 -85219872 - AluSx SINE Alu 0 312 1 2412 77 0 7 chr18 769117 769417 -85219517 - AluSc SINE Alu -11 298 1 1959 116 18 0 chr18 769677 769954 -85218980 - AluSx SINE Alu -30 282 1 2660 43 0 0 chr18 772449 772750 -85216184 - AluY SINE Alu -10 301 1 2687 39 0 3 chr18 773993 774305 -85214629 - AluY SINE Alu 0 311 1 1995 129 4 4 chr18 774884 775164 -85213770 - AluJb SINE Alu -32 280 1 2481 64 3 0 chr18 775195 775490 -85213444 + AluY SINE Alu 1 296 -15 2131 98 7 0 chr18 775547 775822 -85213112 + AluSx SINE Alu 21 297 -15 236 273 45 0 chr18 776418 776484 -85212450 + MLT1K LTR MaLR 517 585 -3 507 279 87 19 chr18 776713 776861 -85212073 + LTR33 LTR ERVL 299 466 -55 1835 155 13 16 chr18 776861 777170 -85211764 - AluJo SINE Alu -4 308 1 507 279 87 19 chr18 777170 777229 -85211705 + LTR33 LTR ERVL 466 520 -1 1917 152 7 0 chr18 777426 777715 -85211219 - AluSx SINE Alu -21 291 1 1823 169 35 0 chr18 777870 778160 -85210774 + AluJb SINE Alu 1 300 -12 3465 207 67 22 chr18 779065 780305 -85208629 - L1ME2 LINE L1 -9 6155 4866 1420 75 0 11 chr18 780306 780494 -85208440 - AluSg/x SINE Alu -7 303 118 2674 199 79 29 chr18 780494 781253 -85207681 - L1ME2 LINE L1 -1315 4831 4035 1867 209 47 12 chr18 781267 781760 -85207174 - L1ME2 LINE L1 -2537 3609 3100 2357 70 3 0 chr18 781762 782061 -85206873 - AluY SINE Alu -1 310 11 2096 94 21 0 chr18 782068 782356 -85206578 - AluSx SINE Alu -7 305 12 212 261 69 39 chr18 783567 783697 -85205237 + MIR SINE MIR 17 150 -58 1174 157 60 19 chr18 784341 784576 -85204358 - AluJb SINE Alu 0 312 86 340 215 237 0 chr18 784754 784889 -85204045 + MIR SINE MIR 92 258 -4 726 179 51 45 chr18 784891 785047 -85203887 + FRAM SINE Alu 1 157 -19 2077 125 0 3 chr18 785152 785439 -85203495 + AluJo SINE Alu 1 286 -26 2037 124 7 0 chr18 785782 786072 -85202862 - AluSx SINE Alu -20 292 1 908 131 0 0 chr18 787040 787170 -85201764 - FLAM_C SINE Alu 0 133 4 2045 129 0 3 chr18 787401 787710 -85201224 + AluSx SINE Alu 1 308 0 362 248 101 34 chr18 787716 787865 -85201069 + MIR SINE MIR 72 230 -32 742 157 9 0 chr18 788238 788353 -85200581 + FLAM_C SINE Alu 3 118 -15 29 28 0 0 chr18 788353 788389 -85200545 + AT_rich Low_complexity Low_complexity 1 36 0 2390 109 0 0 chr18 788442 788745 -85200189 + AluSx SINE Alu 1 303 -9 2313 98 0 0 chr18 789547 789834 -85199100 - AluSx SINE Alu -25 287 1 232 218 39 39 chr18 790033 790111 -85198823 - MIR3 SINE MIR -21 187 110 2110 133 3 3 chr18 790655 790955 -85197979 + AluSx SINE Alu 1 300 -12 2047 123 23 13 chr18 791100 791401 -85197533 - AluSx SINE Alu 0 312 9 2581 137 26 10 chr18 791409 791824 -85197110 - MSTA LTR MaLR -6 422 1 258 346 0 19 chr18 791824 791931 -85197003 - L2 LINE L2 -192 3080 2976 21 57 0 0 chr18 792742 792777 -85196157 + AT_rich Low_complexity Low_complexity 1 35 0 848 213 6 12 chr18 792798 792967 -85195967 - FRAM SINE Alu -8 168 1 2077 144 0 7 chr18 792972 793270 -85195664 - AluSx SINE Alu -16 296 1 1888 137 6 35 chr18 793274 793588 -85195346 - AluSq SINE Alu -8 305 1 1157 109 6 6 chr18 793598 793791 -85195143 - AluSg/x SINE Alu 0 325 132 2342 74 3 13 chr18 793791 794090 -85194844 - AluY SINE Alu -15 296 1 1444 132 91 4 chr18 794097 794340 -85194594 - L1MC1 LINE L1 0 6333 6070 2356 99 0 16 chr18 794649 794961 -85193973 - AluSq SINE Alu -6 307 1 2343 107 0 0 chr18 795467 795766 -85193168 - AluSq SINE Alu -14 299 1 1578 147 7 63 chr18 796057 796370 -85192564 - AluJb SINE Alu 0 311 15 1141 159 26 60 chr18 796408 796641 -85192293 + AluJo SINE Alu 5 229 -83 1780 163 0 3 chr18 796643 796932 -85192002 + AluJb SINE Alu 2 289 -23 1837 164 0 0 chr18 797470 797777 -85191157 + AluJb SINE Alu 1 307 0 2099 126 0 0 chr18 797809 798095 -85190839 - AluSq SINE Alu -27 286 1 223 37 0 0 chr18 798417 798444 -85190490 + (TTTA)n Simple_repeat Simple_repeat 2 88 0 2112 125 0 0 chr18 798444 798725 -85190209 - AluSx SINE Alu -1 311 5 2652 56 0 0 chr18 799053 799359 -85189575 + AluY SINE Alu 1 306 -5 720 115 62 0 chr18 799696 799809 -85189125 + L1MC4 LINE L1 6949 7068 -974 760 140 13 60 chr18 799819 799969 -85188965 + FLAM_C SINE Alu 1 143 0 2132 229 161 6 chr18 800022 800700 -85188234 + L1MC4 LINE L1 7130 7912 -130 1530 140 13 0 chr18 800907 801136 -85187798 - AluSg/x SINE Alu -1 309 78 282 159 0 0 chr18 801137 801181 -85187753 - Alu SINE Alu -255 44 1 924 137 78 0 chr18 802090 802243 -85186691 + FRAM SINE Alu 1 165 -11 236 330 0 0 chr18 802459 802547 -85186387 + MIR SINE MIR 45 132 -76 2118 123 36 3 chr18 802937 803239 -85185695 - AluSq SINE Alu -1 312 1 1823 143 3 20 chr18 803932 804233 -85184701 + AluJo SINE Alu 16 311 -1 3293 210 48 45 chr18 805053 805901 -85183033 - MER21B LTR ERV1 -1 862 12 2193 127 0 3 chr18 805982 806282 -85182652 + AluSx SINE Alu 1 299 -13 516 324 77 27 chr18 807180 807374 -85181560 - L3 LINE CR1 -2 1575 1359 2310 118 0 0 chr18 807374 807679 -85181255 - AluSq SINE Alu -8 305 1 516 324 77 27 chr18 807679 807783 -85181151 - L3 LINE CR1 -218 1359 1262 450 240 173 0 chr18 808075 808225 -85180709 + MER5A DNA MER1_type 14 189 0 197 159 222 0 chr18 808363 808426 -85180508 + MIR SINE MIR 75 151 -111 724 182 8 8 chr18 810260 810392 -85178542 + AluSq/x SINE Alu 2 133 -179 1588 181 3 21 chr18 810412 810699 -85178235 + AluJo SINE Alu 13 294 -18 388 268 73 30 chr18 810860 811024 -85177910 + MIR SINE MIR 8 178 -84 1513 159 0 4 chr18 811029 811261 -85177673 - AluJb SINE Alu -24 288 58 2484 74 0 7 chr18 811269 811579 -85177355 + AluY SINE Alu 1 308 -3 374 161 14 14 chr18 811579 811649 -85177285 - AluS SINE Alu -243 60 1 1540 79 0 0 chr18 812653 812843 -85176091 - AluSg/x SINE Alu -2 310 121 593 218 39 1 chr18 812860 812985 -85175949 + MLT1D LTR MaLR 291 388 -2 280 321 57 19 chr18 813594 813700 -85175234 - L2 LINE L2 -36 3236 3127 266 183 0 17 chr18 813768 813828 -85175106 - L2 LINE L2 -86 3227 3169 231 114 0 0 chr18 814297 814332 -85174602 + (TG)n Simple_repeat Simple_repeat 2 36 0 21 57 0 0 chr18 814447 814482 -85174452 + AT_rich Low_complexity Low_complexity 1 35 0 2155 108 3 7 chr18 814849 815145 -85173789 + AluSx SINE Alu 1 295 -17 1847 183 146 32 chr18 815474 815966 -85172968 - LTR10A LTR ERV1 -61 548 1 2169 97 17 13 chr18 816110 816408 -85172526 - AluSg SINE Alu -11 299 1 220 314 78 0 chr18 817023 817125 -85171809 + MIR3 SINE MIR 64 173 -35 1763 157 63 6 chr18 817146 817465 -85171469 - MER1B DNA MER1_type 0 337 1 1994 94 0 8 chr18 817749 818014 -85170920 - AluSg SINE Alu -47 263 1 281 250 106 19 chr18 818077 818181 -85170753 + L1ME4a LINE L1 5982 6094 -27 335 206 59 0 chr18 818182 818250 -85170684 - Tigger5 DNA MER2_type -1 2322 2251 330 200 0 0 chr18 818219 818274 -85170660 - Tigger5 DNA MER2_type -2268 55 1 * 23 33 0 0 chr18 818491 818521 -85170413 + AT_rich Low_complexity Low_complexity 1 30 0 2282 110 0 3 chr18 818596 818906 -85170028 - AluSx SINE Alu -3 309 1 2253 82 0 0 chr18 818941 819265 -85169669 - AluY SINE Alu 0 324 1 2029 117 29 0 chr18 819672 819953 -85168981 + AluSx SINE Alu 1 289 -23 32 43 0 0 chr18 819953 819999 -85168935 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr18 820521 820542 -85168392 + AT_rich Low_complexity Low_complexity 1 21 0 2129 138 0 0 chr18 820555 820852 -85168082 + AluSx SINE Alu 1 297 -15 240 164 60 45 chr18 820860 820927 -85168007 - L1ME3A LINE L1 -104 6066 5999 239 178 27 110 chr18 821083 821124 -85167810 - LTR37B LTR ERV1 0 468 434 2509 72 0 19 chr18 821124 821431 -85167503 + AluSg SINE Alu 1 301 -9 239 178 27 110 chr18 821431 821462 -85167472 - LTR37B LTR ERV1 -34 434 402 2232 126 3 0 chr18 821463 821773 -85167161 + AluSx SINE Alu 1 311 -1 650 237 41 46 chr18 821788 822007 -85166927 - LTR37B LTR ERV1 -53 415 198 795 179 10 97 chr18 822061 822194 -85166740 - LTR37B LTR ERV1 -285 183 71 1502 147 4 0 chr18 822194 822419 -85166515 + AluJo SINE Alu 87 312 0 795 179 10 97 chr18 822419 822481 -85166453 - LTR37B LTR ERV1 -397 71 5 337 279 104 5 chr18 822488 822689 -85166245 - L1ME3A LINE L1 -243 5923 5703 307 282 18 0 chr18 823100 823210 -85165724 + MER94 DNA DNA 8 119 -15 413 272 36 2 chr18 823832 823973 -85164961 + MIR SINE MIR 20 166 -65 2299 116 0 3 chr18 824128 824431 -85164503 + AluSx SINE Alu 1 302 -10 883 232 45 0 chr18 824793 824991 -85163943 + LTR16A1 LTR ERVL 251 457 0 305 265 20 105 chr18 825015 825215 -85163719 - MER112 DNA MER1_type -11 249 67 309 301 0 0 chr18 825246 825319 -85163615 - MER112 DNA MER1_type -187 73 1 955 228 43 16 chr18 825693 825947 -85162987 - MIR SINE MIR 0 262 2 599 289 50 70 chr18 826474 826817 -85162117 + MLT1I LTR MaLR 70 405 -4 575 274 75 43 chr18 827110 827493 -85161441 + L1ME4a LINE L1 5332 5701 -420 2538 50 3 0 chr18 827493 827792 -85161142 + AluY SINE Alu 1 300 -11 414 0 0 0 chr18 827792 827838 -85161096 + (TA)n Simple_repeat Simple_repeat 2 47 0 575 274 75 43 chr18 827838 827955 -85160979 + L1ME4a LINE L1 5700 5849 -272 360 0 0 0 chr18 828483 828523 -85160411 + (CA)n Simple_repeat Simple_repeat 2 41 0 348 225 9 54 chr18 828628 828725 -85160209 + CT-rich Low_complexity Low_complexity 3 96 -12 2311 114 3 3 chr18 828725 829033 -85159901 - AluSx SINE Alu -4 308 1 348 225 9 54 chr18 829033 829046 -85159888 + CT-rich Low_complexity Low_complexity 96 108 0 222 218 73 0 chr18 829940 829995 -85158939 + L2 LINE L2 3214 3272 0 236 200 77 0 chr18 830419 830484 -85158450 - L1ME4a LINE L1 -74 6047 5978 * 251 255 64 11 chr18 830479 830573 -85158361 - L1ME3A LINE L1 -440 5681 5583 1949 125 7 14 chr18 830654 830943 -85157991 - AluSx SINE Alu -24 288 2 1729 127 33 0 chr18 832333 832609 -85156325 - L1MB3 LINE L1 0 6183 5899 195 42 0 0 chr18 832609 832633 -85156301 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 464 113 0 0 chr18 832633 832695 -85156239 - AluJ/FRAM SINE Alu -21 291 230 1246 117 48 0 chr18 832695 832901 -85156033 - L1MB3 LINE L1 -281 5902 5687 2138 112 0 0 chr18 833112 833388 -85155546 + AluSx SINE Alu 1 276 -36 237 33 0 0 chr18 833394 833424 -85155510 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 1888 132 21 7 chr18 833615 833902 -85155032 - AluJb SINE Alu -20 292 2 252 297 91 30 chr18 834109 834220 -85154714 + MIR SINE MIR 29 155 -107 2467 163 115 8 chr18 834220 834717 -85154217 + MER44D DNA MER2_type 1 605 0 252 297 91 30 chr18 834717 834770 -85154164 + MIR SINE MIR 155 203 -59 1965 209 111 20 chr18 834931 835625 -85153309 - Charlie2 DNA MER1_type 0 2862 2106 658 270 70 15 chr18 835640 835910 -85153024 + L2 LINE L2 2951 3235 -78 2260 113 3 3 chr18 836176 836486 -85152448 + AluSx SINE Alu 1 310 -2 2251 197 49 6 chr18 836504 836970 -85151964 - MER66B LTR ERV1 0 486 1 1910 124 22 65 chr18 837011 837333 -85151601 + AluSx SINE Alu 1 308 -4 2005 94 12 68 chr18 837669 838009 -85150925 + MER4B LTR ERV1 1 321 -289 1945 97 38 14 chr18 838016 838306 -85150628 - AluSg SINE Alu -13 297 1 1062 105 4 23 chr18 838309 838499 -85150435 + MER4E LTR ERV1 618 766 0 1602 78 9 23 chr18 838571 838789 -85150145 + AluSx SINE Alu 1 215 -97 2405 98 0 16 chr18 838970 839288 -85149646 - AluSq SINE Alu 0 313 1 2343 107 0 0 chr18 839794 840093 -85148841 - AluSq SINE Alu -14 299 1 1578 147 7 63 chr18 840384 840697 -85148237 - AluJb SINE Alu 0 311 15 1141 159 26 60 chr18 840735 840968 -85147966 + AluJo SINE Alu 5 229 -83 1780 163 0 3 chr18 840970 841259 -85147675 + AluJb SINE Alu 2 289 -23 1837 164 0 0 chr18 841797 842104 -85146830 + AluJb SINE Alu 1 307 0 2099 126 0 0 chr18 842136 842422 -85146512 - AluSq SINE Alu -27 286 1 2112 125 0 0 chr18 842744 843052 -85145882 - AluSx SINE Alu 0 312 5 2652 56 0 0 chr18 843380 843686 -85145248 + AluY SINE Alu 1 306 -5 720 115 62 0 chr18 844023 844136 -85144798 + L1MC4 LINE L1 6949 7068 -974 760 140 13 60 chr18 844146 844296 -85144638 + FLAM_C SINE Alu 1 143 0 2132 229 161 6 chr18 844349 845027 -85143907 + L1MC4 LINE L1 7130 7912 -130 1530 140 13 0 chr18 845234 845463 -85143471 - AluSg/x SINE Alu -1 309 78 282 159 0 0 chr18 845464 845508 -85143426 - Alu SINE Alu -259 44 1 924 137 78 0 chr18 846417 846570 -85142364 + FRAM SINE Alu 1 165 -11 236 330 0 0 chr18 846786 846874 -85142060 + MIR SINE MIR 45 132 -76 2118 123 36 3 chr18 847264 847566 -85141368 - AluSq SINE Alu -1 312 1 1823 143 3 20 chr18 848259 848560 -85140374 + AluJo SINE Alu 16 311 -1 3340 210 48 45 chr18 849380 850228 -85138706 - MER21B LTR ERV1 -1 862 12 2069 127 0 3 chr18 850309 850609 -85138325 + AluSx SINE Alu 1 299 -13 231 248 83 105 chr18 850766 850899 -85138035 + MIR SINE MIR 133 262 0 648 337 179 21 chr18 851507 851701 -85137233 - L3 LINE CR1 -2 1575 1413 2188 118 0 0 chr18 851701 852006 -85136928 - AluSq SINE Alu -8 305 1 648 337 179 21 chr18 852006 852375 -85136559 - L3 LINE CR1 -164 1413 923 512 240 173 0 chr18 852402 852552 -85136382 + MER5A DNA MER1_type 14 189 0 224 163 215 1 chr18 852683 852753 -85136181 + MIR SINE MIR 68 151 -64 729 182 8 8 chr18 854587 854719 -85134215 + AluSq/x SINE Alu 2 133 -179 1480 181 3 21 chr18 854739 855026 -85133908 + AluJo SINE Alu 13 294 -18 453 268 73 30 chr18 855187 855351 -85133583 + MIR SINE MIR 8 178 -84 1646 156 0 43 chr18 855356 855596 -85133338 - AluJb SINE Alu -24 288 62 2361 74 0 6 chr18 855596 855907 -85133027 + AluY SINE Alu 1 309 -2 1646 156 0 43 chr18 855907 855967 -85132967 - AluJb SINE Alu -250 62 1 1881 118 3 59 chr18 856957 856985 -85131949 - AluSx SINE Alu -8 304 276 185 0 0 39 chr18 856985 857011 -85131923 + (GTTTG)n Simple_repeat Simple_repeat 5 29 0 1881 118 3 59 chr18 857011 857304 -85131630 - AluSx SINE Alu -36 276 1 1485 152 25 142 chr18 857356 857750 -85131184 + MER7A DNA MER2_type 1 346 0 2006 96 0 51 chr18 858730 859044 -85129890 + AluSx SINE Alu 1 298 -14 1104 127 0 12 chr18 859044 859217 -85129717 + AluSg/x SINE Alu 132 302 -8 390 335 5 31 chr18 859575 859769 -85129165 - MIR3 SINE MIR -7 201 13 472 299 98 14 chr18 859805 860019 -85128915 + MIR SINE MIR 29 260 -2 2129 113 3 0 chr18 860385 860685 -85128249 + AluSx SINE Alu 1 301 -11 2520 119 67 7 chr18 863229 863632 -85125302 - MSTA LTR MaLR 0 428 2 258 342 25 17 chr18 863669 863789 -85125145 - MIR SINE MIR -126 136 16 208 186 29 114 chr18 864308 864378 -85124556 - MIR SINE MIR -121 141 78 2056 105 7 7 chr18 865075 865371 -85123563 + AluSq SINE Alu 1 296 -17 24 32 0 0 chr18 866154 866185 -85122749 + AT_rich Low_complexity Low_complexity 1 31 0 2061 125 3 7 chr18 867817 868122 -85120812 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr18 868609 868630 -85120304 + AT_rich Low_complexity Low_complexity 1 21 0 739 180 0 8 chr18 868645 868767 -85120167 - FLAM_C SINE Alu -18 125 5 1576 128 75 14 chr18 869569 869850 -85119084 + AluSx SINE Alu 1 298 -14 861 189 0 0 chr18 869938 870081 -85118853 - FRAM SINE Alu -34 142 1 2016 94 4 0 chr18 870262 870529 -85118405 + AluSx SINE Alu 39 306 -6 199 223 198 25 chr18 870537 870658 -85118276 - MIR3 SINE MIR -53 155 14 202 182 127 18 chr18 870863 870918 -85118016 - L3 LINE CR1 -5 1572 1512 520 350 47 39 chr18 871004 871390 -85117544 - L3 LINE CR1 -247 1330 942 192 282 28 28 chr18 871506 871577 -85117357 - L3 LINE CR1 -727 850 780 687 206 170 0 chr18 871685 871879 -85117055 + L1MD2 LINE L1 6068 6294 -65 189 0 0 0 chr18 871884 871905 -85117029 + (A)n Simple_repeat Simple_repeat 1 21 0 378 211 103 27 chr18 872175 872265 -85116669 - L1MB3 LINE L1 0 6180 6078 1488 26 0 4 chr18 872265 872529 -85116405 + (CACCAT)n Simple_repeat Simple_repeat 1 263 0 378 211 103 27 chr18 872529 872569 -85116365 - L1MB3 LINE L1 -102 6078 6042 1371 47 0 0 chr18 872569 872847 -85116087 + (CACCAT)n Simple_repeat Simple_repeat 1 278 0 684 178 7 7 chr18 872849 872995 -85115939 - L1MB3 LINE L1 -103 6080 5935 600 270 115 5 chr18 872995 873195 -85115739 + Charlie8 DNA MER1_type 59 280 -2137 24594 25 0 3 chr18 873590 877246 -85111688 + L1PA3 LINE L1 2499 6155 0 2193 78 17 0 chr18 877761 878054 -85110880 - AluSp SINE Alu -15 298 1 540 262 110 74 chr18 879177 879677 -85109257 - L2 LINE L2 -3 3310 2711 1730 132 35 7 chr18 879677 879964 -85108970 - AluSx SINE Alu -17 295 1 540 262 110 74 chr18 879964 880013 -85108921 - L2 LINE L2 -602 2711 2665 199 150 167 50 chr18 880647 880707 -85108227 - MIR SINE MIR -109 153 87 2061 73 73 3 chr18 882531 882817 -85106117 + AluSx SINE Alu 2 307 -5 2261 67 3 0 chr18 882938 883223 -85105711 - AluY SINE Alu -25 286 1 1963 109 16 7 chr18 884262 884565 -85104369 - AluSg SINE Alu -4 306 1 306 283 79 62 chr18 884613 884790 -85104144 - L2 LINE L2 -1313 2001 1822 462 263 29 57 chr18 884915 885124 -85103810 + MLT1L LTR MaLR 6 208 -407 1203 209 66 100 chr18 885466 886032 -85102902 - L1ME LINE L1 -683 5548 4964 1512 192 18 3 chr18 886032 886318 -85102616 - AluJb SINE Alu -22 290 1 1203 209 66 100 chr18 886318 886563 -85102371 - L1ME LINE L1 -1267 4964 4776 2160 115 3 0 chr18 886563 886868 -85102066 - AluSx SINE Alu -6 306 1 1203 209 66 100 chr18 886868 886905 -85102029 - L1ME LINE L1 -1455 4776 4739 693 198 114 12 chr18 886909 887076 -85101858 - MER58A DNA MER1_type -3 221 38 2787 232 60 64 chr18 887108 887453 -85101481 - L1ME LINE L1 -1480 4735 4390 1983 120 36 73 chr18 887453 887560 -85101374 + MER7A DNA MER2_type 4 113 -2925 1987 113 3 0 chr18 887560 887869 -85101065 - AluSx SINE Alu 0 310 1 1983 120 36 73 chr18 887869 888118 -85100816 + MER7A DNA MER2_type 113 346 0 2787 232 60 64 chr18 888118 888822 -85100112 - L1ME LINE L1 -1825 4390 3688 2049 94 0 33 chr18 888822 889129 -85099805 - AluSg SINE Alu -13 297 1 2787 232 60 64 chr18 889129 889193 -85099741 - L1ME LINE L1 -2527 3688 3625 428 297 73 46 chr18 889392 889651 -85099283 - L1ME LINE L1 -6031 365 100 542 239 56 46 chr18 889691 889888 -85099046 + AluSg/x SINE Alu 97 295 -15 2024 130 0 7 chr18 889950 890249 -85098685 + AluSq SINE Alu 1 297 -16 1388 168 78 4 chr18 890428 890696 -85098238 - AluJb SINE Alu -24 288 1 2058 109 3 3 chr18 890903 891196 -85097738 - AluSp SINE Alu -20 293 1 2279 93 3 3 chr18 891297 891599 -85097335 - AluSx SINE Alu -10 302 1 2536 243 113 24 chr18 892673 892697 -85096237 + L2 LINE L2 1982 2002 -1312 2149 100 0 3 chr18 892697 892996 -85095938 - AluSg SINE Alu -12 298 1 2536 243 113 24 chr18 892996 893843 -85095091 + L2 LINE L2 2002 2931 -383 923 220 54 45 chr18 893849 894072 -85094862 + MIR SINE MIR 4 228 -34 1438 229 161 35 chr18 894160 894380 -85094554 - L1ME3A LINE L1 -11 6159 5968 1794 179 0 0 chr18 894380 894682 -85094252 + AluJb SINE Alu 1 302 -10 1438 229 161 35 chr18 894682 895064 -85093870 - L1ME3A LINE L1 -202 5968 5481 1166 114 0 0 chr18 895064 895231 -85093703 - AluSg/x SINE Alu -17 295 129 640 232 61 5 chr18 895238 895436 -85093498 - L1ME3A LINE L1 -692 5470 5262 283 253 67 0 chr18 895463 895538 -85093396 + L2 LINE L2 3234 3313 0 2208 115 0 6 chr18 896390 896703 -85092231 + AluSx SINE Alu 1 311 -1 414 258 62 91 chr18 896902 897111 -85091823 - MIR SINE MIR -46 216 14 1565 173 0 7 chr18 898011 898295 -85090639 + AluJo SINE Alu 28 309 -3 1948 128 30 24 chr18 898815 899118 -85089816 + AluSx SINE Alu 1 299 -13 2229 135 47 39 chr18 899115 899499 -85089435 + MSTC LTR MaLR 42 428 0 213 302 47 12 chr18 899615 899701 -85089233 + L2 LINE L2 2562 2650 -664 2279 97 3 3 chr18 899850 900150 -85088784 + AluSq SINE Alu 1 300 -13 382 350 133 44 chr18 900189 900506 -85088428 + L2 LINE L2 2913 3257 -15 493 286 79 21 chr18 900525 900714 -85088220 + MIR SINE MIR 26 225 -37 23 0 0 0 chr18 901431 901454 -85087480 + AT_rich Low_complexity Low_complexity 1 23 0 1783 137 49 0 chr18 901582 901845 -85087089 - AluSx SINE Alu -36 276 1 21 0 0 0 chr18 901942 901963 -85086971 + AT_rich Low_complexity Low_complexity 1 21 0 758 159 16 8 chr18 901975 902101 -85086833 + FLAM_A SINE Alu 10 136 -6 198 0 0 0 chr18 902254 902276 -85086658 + (CA)n Simple_repeat Simple_repeat 2 23 0 2189 118 10 0 chr18 902473 902777 -85086157 - AluSq SINE Alu -6 307 1 22 0 0 0 chr18 903094 903116 -85085818 + AT_rich Low_complexity Low_complexity 1 22 0 652 236 13 92 chr18 903122 903321 -85085613 - MIR SINE MIR -47 215 35 2080 199 56 54 chr18 903321 903823 -85085111 - MLT1D LTR MaLR -2 503 1 652 236 13 92 chr18 903823 903852 -85085082 - MIR SINE MIR -227 35 5 1347 90 0 21 chr18 903942 904131 -85084803 - MER30B DNA MER1_type -5 185 1 945 141 19 0 chr18 904429 904585 -85084349 + MSTD LTR MaLR 1 159 -237 961 176 35 15 chr18 904598 904797 -85084137 + AluJo SINE Alu 79 281 -31 1072 181 48 29 chr18 904801 905011 -85083923 + MSTD LTR MaLR 181 394 -2 375 23 0 0 chr18 905357 905401 -85083533 + (CA)n Simple_repeat Simple_repeat 1 44 0 266 250 17 0 chr18 905402 905462 -85083472 - MER82 DNA MER2_type -1 652 592 623 226 136 6 chr18 905700 905877 -85083057 - MER82 DNA MER2_type -452 201 2 255 31 0 0 chr18 905944 905976 -85082958 + (T)n Simple_repeat Simple_repeat 1 32 0 809 97 35 0 chr18 906076 906189 -85082745 - AluSq/x SINE Alu -195 118 2 2193 122 0 0 chr18 906221 906516 -85082418 + AluSx SINE Alu 1 295 -17 29 28 0 0 chr18 907245 907281 -85081653 + AT_rich Low_complexity Low_complexity 1 36 0 1889 135 7 30 chr18 907435 907732 -85081202 + AluSx SINE Alu 6 295 -17 1845 170 0 19 chr18 908098 908409 -85080525 + AluJo SINE Alu 6 310 -2 1952 142 16 3 chr18 908571 908880 -85080054 + AluSq SINE Alu 1 313 0 2200 113 0 0 chr18 908887 909171 -85079763 + AluSq SINE Alu 1 284 -29 22 0 0 0 chr18 909488 909510 -85079424 + AT_rich Low_complexity Low_complexity 1 22 0 230 243 184 10 chr18 909725 909761 -85079173 - L2 LINE L2 0 3313 3285 2238 110 16 3 chr18 909761 910069 -85078865 + AluSq SINE Alu 1 312 -1 230 243 184 10 chr18 910069 910135 -85078799 - L2 LINE L2 -28 3285 3193 659 274 17 6 chr18 910142 910317 -85078617 - MIR SINE MIR 0 262 86 841 123 128 68 chr18 910347 910566 -85078368 - MER33 DNA MER1_type 0 324 93 1315 115 0 0 chr18 910569 910743 -85078191 + AluSx SINE Alu 3 176 -136 566 45 0 0 chr18 910743 910809 -85078125 - MER33 DNA MER1_type -216 108 43 1139 169 0 0 chr18 910949 911127 -85077807 + AluSg/x SINE Alu 134 311 -1 25 0 0 0 chr18 911153 911178 -85077756 + AT_rich Low_complexity Low_complexity 1 25 0 787 200 86 0 chr18 911181 911321 -85077613 + FAM SINE Alu 1 152 -33 276 30 0 0 chr18 911322 911355 -85077579 + (TC)n Simple_repeat Simple_repeat 2 34 0 259 130 0 0 chr18 911371 911417 -85077517 + LTR66 LTR ERVL 394 439 -171 210 37 0 0 chr18 911449 911476 -85077458 + (CAG)n Simple_repeat Simple_repeat 2 28 0 827 125 0 62 chr18 911479 911623 -85077311 + FLAM_C SINE Alu 7 141 -2 2356 78 0 3 chr18 911813 912133 -85076801 - AluSc SINE Alu 0 319 1 1783 191 0 0 chr18 912148 912431 -85076503 - AluJo SINE Alu -29 283 1 825 230 91 59 chr18 912532 912871 -85076063 + L1MC4 LINE L1 6883 7232 -810 1694 241 44 0 chr18 912885 913291 -85075643 + L1MC4 LINE L1 7300 7723 -319 897 229 76 8 chr18 913340 913589 -85075345 - MLT1C LTR MaLR -10 457 192 1890 111 7 4 chr18 913600 913871 -85075063 - AluSc SINE Alu -1 308 37 362 203 152 0 chr18 913871 913950 -85074984 - MLT1C LTR MaLR -375 92 2 1213 239 20 23 chr18 913950 914256 -85074678 + L1MC4 LINE L1 7736 8040 -2 3654 45 5 2 chr18 914257 914706 -85074228 + L1PA8 LINE L1 5702 6151 -21 297 0 0 0 chr18 914706 914739 -85074195 + (CA)n Simple_repeat Simple_repeat 2 34 0 459 320 111 13 chr18 914989 915223 -85073711 + MIR SINE MIR 6 262 0 1968 120 41 0 chr18 915282 915573 -85073361 + AluSg SINE Alu 1 303 -7 285 249 28 61 chr18 915875 916086 -85072848 + L1M4 LINE L1 5208 5411 -757 192 286 250 24 chr18 916281 916449 -85072485 - L3 LINE CR1 -5 1572 1367 215 329 169 27 chr18 916473 916692 -85072242 - L3 LINE CR1 -1293 284 35 23 33 0 0 chr18 916720 916750 -85072184 + AT_rich Low_complexity Low_complexity 1 30 0 1004 110 117 0 chr18 916783 916928 -85072006 - U1 snRNA snRNA -1 164 3 2660 119 67 7 chr18 919329 919732 -85069202 - MSTA LTR MaLR 0 428 2 244 342 25 17 chr18 919769 919889 -85069045 - MIR SINE MIR -126 136 16 200 186 29 114 chr18 920407 920477 -85068457 - MIR SINE MIR -121 141 78 2128 131 0 7 chr18 921174 921472 -85067462 + AluSx SINE Alu 1 296 -16 987 179 6 12 chr18 921473 921646 -85067288 + AluJb SINE Alu 133 304 -8 21 57 0 0 chr18 921667 921702 -85067232 + AT_rich Low_complexity Low_complexity 1 35 0 288 346 0 19 chr18 922513 922620 -85066314 + L2 LINE L2 2976 3080 -192 2580 140 26 10 chr18 922620 923035 -85065899 + MSTA LTR MaLR 1 422 -6 1965 127 25 7 chr18 923043 923327 -85065607 + AluSx SINE Alu 9 297 -15 2585 28 0 0 chr18 924397 924685 -85064249 - AluY SINE Alu -22 289 2 431 286 8 24 chr18 924696 924822 -85064112 - MIR SINE MIR -133 129 6 204 284 37 12 chr18 925803 925884 -85063050 - MIR SINE MIR -123 139 57 325 250 119 54 chr18 926094 926262 -85062672 - MLT1L LTR MaLR -102 513 335 2159 107 0 10 chr18 926356 926645 -85062289 + AluSq SINE Alu 1 286 -27 216 0 0 0 chr18 926677 926701 -85062233 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1812 164 0 0 chr18 926703 926984 -85061950 - AluJb SINE Alu -31 281 1 1758 163 0 3 chr18 927521 927810 -85061124 - AluJb SINE Alu -23 289 2 1134 159 26 60 chr18 927812 928045 -85060889 - AluJo SINE Alu -83 229 5 1552 147 7 63 chr18 928083 928396 -85060538 + AluJb SINE Alu 15 311 0 2323 107 0 0 chr18 928688 928987 -85059947 + AluSq SINE Alu 1 299 -14 772 121 0 57 chr18 929304 929445 -85059489 + FLAM_C SINE Alu 1 133 0 2028 146 0 0 chr18 930596 930890 -85058044 + AluSg SINE Alu 1 294 -16 221 203 24 49 chr18 930890 931013 -85057921 + (TA)n Simple_repeat Simple_repeat 1 120 0 25 31 0 0 chr18 931031 931063 -85057871 + AT_rich Low_complexity Low_complexity 1 32 0 375 312 8 24 chr18 931124 931249 -85057685 - MIR SINE MIR -137 125 3 1932 152 3 7 chr18 931358 931661 -85057273 - AluSx SINE Alu -10 302 1 751 146 73 0 chr18 931662 931785 -85057149 - FLAM_A SINE Alu 0 142 11 222 314 0 0 chr18 933616 933667 -85055267 - L2 LINE L2 -12 3260 3210 795 206 17 120 chr18 933758 934050 -85054884 - L1MC4 LINE L1 -31 8011 7750 2205 109 7 0 chr18 934159 934452 -85054482 + AluSx SINE Alu 1 295 -17 1436 118 98 0 chr18 934511 934757 -85054177 + L1MA8 LINE L1 6001 6270 -21 2084 143 0 0 chr18 934980 935280 -85053654 - AluSx SINE Alu -9 303 4 2430 67 3 0 chr18 935534 935834 -85053100 + AluY SINE Alu 1 301 -10 1426 147 5 0 chr18 935918 936129 -85052805 - AluSp SINE Alu -15 298 87 234 0 0 0 chr18 936285 936311 -85052623 + (A)n Simple_repeat Simple_repeat 1 26 0 2042 127 0 0 chr18 936497 936772 -85052162 + AluSx SINE Alu 1 275 -37 2338 72 13 16 chr18 936773 937079 -85051855 + AluY SINE Alu 1 305 -6 1960 80 7 25 chr18 937099 937375 -85051559 + L1P5 LINE L1 5396 5666 -485 2207 101 3 0 chr18 937375 937671 -85051263 + AluSx SINE Alu 1 297 -15 1070 118 19 6 chr18 937671 937832 -85051102 + AluSq SINE Alu 134 296 -17 23 33 0 0 chr18 938615 938645 -85050289 + AT_rich Low_complexity Low_complexity 1 30 0 209 182 0 0 chr18 989255 989288 -84999646 + (TG)n Simple_repeat Simple_repeat 2 34 0 259 103 0 0 chr18 989291 989330 -84999604 - AluJo SINE Alu -20 282 244 919 167 7 0 chr18 989330 989474 -84999460 - AluJo SINE Alu -167 145 1 28 48 0 0 chr18 990240 990282 -84998652 + AT_rich Low_complexity Low_complexity 1 42 0 1989 130 0 23 chr18 991196 991503 -84997431 - AluSx SINE Alu -12 300 1 1860 156 0 7 chr18 992251 992546 -84996388 + AluSx SINE Alu 1 293 -19 1664 154 4 0 chr18 993462 993715 -84995219 - AluSx SINE Alu -1 311 58 2241 117 0 0 chr18 993715 994014 -84994920 - AluSx SINE Alu -13 299 1 1107 140 0 6 chr18 994033 994204 -84994730 + AluJb SINE Alu 130 299 -13 2032 112 14 14 chr18 994766 995061 -84993873 - AluSx SINE Alu -17 295 1 279 314 177 0 chr18 995207 995331 -84993603 - MIR3 SINE MIR -15 193 48 1483 178 16 29 chr18 995458 995964 -84992970 - L1MA9 LINE L1 -6 6306 5817 180 0 0 0 chr18 995964 995984 -84992950 + (TTA)n Simple_repeat Simple_repeat 2 21 0 856 126 8 0 chr18 995984 996103 -84992831 - FLAM_C SINE Alu -23 120 1 800 174 2 7 chr18 996103 996268 -84992666 - L1MD2 LINE L1 -356 5824 5659 2238 112 0 7 chr18 996595 996891 -84992043 - AluSx SINE Alu -18 294 1 383 164 55 0 chr18 997568 997641 -84991293 - MER74A LTR ERVL -27 531 455 642 179 16 13 chr18 997659 997839 -84991095 - L1MB4 LINE L1 -72 6108 5818 2356 97 0 0 chr18 997840 998138 -84990796 - AluSq SINE Alu -15 298 1 225 59 0 0 chr18 998266 998300 -84990634 - L1ME3 LINE L1 0 6162 6129 * 599 299 50 25 chr18 998298 998499 -84990435 + MIR SINE MIR 37 242 -20 755 248 135 9 chr18 998602 998832 -84990102 + MER112 DNA MER1_type 1 259 -1 264 296 0 83 chr18 998835 998943 -84989991 - MIR SINE MIR -56 152 54 283 74 19 37 chr18 998944 998998 -84989936 - L1ME1 LINE L1 0 6166 6114 868 134 92 0 chr18 998953 999095 -84989839 - L1MB7 LINE L1 -18 6166 6012 2052 132 3 0 chr18 1000076 1000364 -84988570 - AluSx SINE Alu -16 296 8 892 133 0 0 chr18 1000365 1000500 -84988434 - AluJb SINE Alu -177 135 1 2110 117 0 4 chr18 1000625 1000906 -84988028 - AluSg SINE Alu -30 280 1 2183 103 7 0 chr18 1000936 1001236 -84987698 + AluSp SINE Alu 2 303 -10 2327 84 0 13 chr18 1001388 1001686 -84987248 + AluY SINE Alu 1 294 -17 419 242 201 0 chr18 1002349 1002498 -84986436 + MIR SINE MIR 70 248 -14 2242 105 3 3 chr18 1002730 1003036 -84985898 - AluSx SINE Alu -6 306 1 275 186 93 106 chr18 1003589 1003750 -84985184 + MER117 DNA MER1_type 1 159 -38 305 236 146 0 chr18 1003994 1004117 -84984817 - LTR67 LTR ERVL -6 551 411 2097 103 3 28 chr18 1004928 1005255 -84983679 - AluSx SINE Alu 0 320 1 24 0 0 0 chr18 1006127 1006151 -84982783 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr18 1006426 1006452 -84982482 + AT_rich Low_complexity Low_complexity 1 26 0 739 164 9 0 chr18 1006457 1006573 -84982361 - AluJb SINE Alu -194 118 2 603 237 30 7 chr18 1007768 1007903 -84981031 + MER5B DNA MER1_type 41 178 0 772 127 68 8 chr18 1007924 1008042 -84980892 + FLAM_C SINE Alu 1 125 -8 2282 95 3 7 chr18 1008054 1008350 -84980584 + AluSq SINE Alu 1 295 -18 3517 72 29 0 chr18 1008399 1008855 -84980079 - MER41A LTR ERV1 -85 469 1 11125 81 21 25 chr18 1008855 1010396 -84978538 - MER41A-int LTR ERV1 -2 5944 4411 395 263 150 23 chr18 1010538 1010671 -84978263 - MIR SINE MIR -67 195 46 1708 156 12 47 chr18 1011571 1011892 -84977042 + AluJb SINE Alu 2 311 -1 23 0 0 0 chr18 1012680 1012703 -84976231 + AT_rich Low_complexity Low_complexity 1 23 0 32 26 0 0 chr18 1012740 1012779 -84976155 + AT_rich Low_complexity Low_complexity 1 39 0 1881 178 38 22 chr18 1012892 1013263 -84975671 + MLT2C1 LTR ERVL 1 377 -20 183 156 0 0 chr18 1013264 1013296 -84975638 + (TATG)n Simple_repeat Simple_repeat 3 34 0 228 182 0 0 chr18 1013307 1013351 -84975583 + MLT2C1 LTR ERVL 468 511 -9 385 300 183 12 chr18 1013364 1013621 -84975313 + ERVL-C1 LTR ERVL 1 321 -5353 2318 92 0 0 chr18 1013634 1013927 -84975007 - AluY SINE Alu -18 293 1 1870 191 146 30 chr18 1013927 1014332 -84974602 + MLT2B1 LTR ERVL 1 358 -162 186 43 0 0 chr18 1014332 1014355 -84974579 + (TC)n Simple_repeat Simple_repeat 2 24 0 1870 191 146 30 chr18 1014355 1014369 -84974565 + MLT2B1 LTR ERVL 358 369 -151 2226 143 3 55 chr18 1014369 1014485 -84974449 + MER7A DNA MER2_type 3 123 -2915 2218 137 0 0 chr18 1014485 1014791 -84974143 - AluSx SINE Alu -6 306 1 2226 143 3 55 chr18 1014791 1015039 -84973895 + MER7A DNA MER2_type 123 346 0 1870 191 146 30 chr18 1015039 1015084 -84973850 + MLT2B1 LTR ERVL 369 520 0 1779 243 18 4 chr18 1015084 1015552 -84973382 + ERVL-C1 LTR ERVL 317 863 -4901 824 193 64 12 chr18 1015557 1015728 -84973206 + ERVL-C1 LTR ERVL 995 1174 -4590 645 231 33 1 chr18 1015728 1015862 -84973072 + MLT2B1 LTR ERVL 342 534 -20 329 229 64 9 chr18 1015924 1016033 -84972901 + ERVL-C1 LTR ERVL 1145 1259 -4395 2113 157 63 32 chr18 1016033 1016572 -84972362 - MLT2A2 LTR ERVL 0 554 1 444 293 0 30 chr18 1016572 1016705 -84972229 + ERVL-C1 LTR ERVL 1294 1422 -4342 383 172 0 0 chr18 1016716 1016774 -84972160 + MER7A DNA MER2_type 279 336 0 837 285 50 0 chr18 1016776 1016997 -84971937 + ERVL-C1 LTR ERVL 1426 1657 -4107 1094 90 0 0 chr18 1017027 1017161 -84971773 + AluSq SINE Alu 1 134 -179 480 133 13 0 chr18 1017162 1017237 -84971697 - MLT2A2 LTR ERVL -182 271 196 1262 91 0 12 chr18 1017248 1017441 -84971493 + AluSq SINE Alu 129 313 0 21006 178 36 15 chr18 1017445 1021417 -84967517 + ERVL-C1 LTR ERVL 1672 5755 -9 1249 186 139 27 chr18 1021421 1021716 -84967218 + MLT2C1 LTR ERVL 9 336 -61 1801 140 7 7 chr18 1021758 1022036 -84966898 + AluSx SINE Alu 3 280 -32 207 0 0 0 chr18 1022044 1022067 -84966867 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 597 226 45 13 chr18 1022193 1022348 -84966586 + MER117 DNA MER1_type 4 163 -34 439 262 37 63 chr18 1022361 1022552 -84966382 + L2 LINE L2 3124 3309 -4 2091 118 0 0 chr18 1022900 1023203 -84965731 + AluSg SINE Alu 1 303 0 21 71 0 0 chr18 1023279 1023321 -84965613 + AT_rich Low_complexity Low_complexity 1 42 0 334 209 91 27 chr18 1023394 1023601 -84965333 - MLT1H LTR MaLR -168 374 152 2506 184 99 52 chr18 1023607 1023980 -84964954 - L1MB7 LINE L1 -14 6170 5816 2188 104 3 7 chr18 1023980 1024307 -84964627 - AluSp SINE Alu 0 313 1 2506 184 99 52 chr18 1024307 1024392 -84964542 - L1MB7 LINE L1 -368 5816 5736 1906 131 3 24 chr18 1024392 1024704 -84964230 + AluSx SINE Alu 1 306 0 2506 184 99 52 chr18 1024704 1024880 -84964054 - L1MB7 LINE L1 -448 5736 5504 249 139 0 0 chr18 1024971 1025007 -84963927 + MADE1 DNA Mariner 5 40 -40 303 0 47 47 chr18 1025078 1025121 -84963813 - MADE1 DNA Mariner -39 41 5 356 289 25 0 chr18 1025124 1025245 -84963689 - L1MC5 LINE L1 -527 7434 7311 346 331 28 7 chr18 1025250 1025395 -84963539 - L1MC4a LINE L1 -462 7346 7199 837 152 0 0 chr18 1025515 1025640 -84963294 + FRAM SINE Alu 21 145 -31 27 0 0 0 chr18 1025640 1025667 -84963267 + AT_rich Low_complexity Low_complexity 1 27 0 2221 92 10 3 chr18 1025779 1026071 -84962863 + AluSq SINE Alu 1 294 -19 369 0 0 0 chr18 1026469 1026510 -84962424 + (CA)n Simple_repeat Simple_repeat 2 42 0 2028 150 0 0 chr18 1026531 1026838 -84962096 + AluSq SINE Alu 5 311 -2 193 316 45 45 chr18 1026986 1027119 -84961815 + L2 LINE L2 1855 1987 -1327 241 297 0 14 chr18 1027229 1027303 -84961631 + MER5B DNA MER1_type 74 146 -32 1962 139 31 0 chr18 1027304 1027592 -84961342 - AluSx SINE Alu -15 297 1 1411 31 6 0 chr18 1027609 1027772 -84961162 - L1PA2 LINE L1 0 6155 5992 220 259 52 0 chr18 1027775 1027818 -84961116 + MER5B DNA MER1_type 1 49 -129 2034 77 91 17 chr18 1027818 1028105 -84960829 + AluSg SINE Alu 1 308 -2 220 259 52 0 chr18 1028105 1028119 -84960815 + MER5B DNA MER1_type 49 61 -117 2196 107 7 0 chr18 1028412 1028703 -84960231 + AluSx SINE Alu 2 294 -18 185 221 116 70 chr18 1028782 1028868 -84960066 - MIR SINE MIR -12 250 161 1546 164 23 59 chr18 1029180 1029485 -84959449 + AluJo SINE Alu 1 294 -18 21 36 0 0 chr18 1030226 1030254 -84958680 + AT_rich Low_complexity Low_complexity 1 28 0 2078 133 7 0 chr18 1030433 1030727 -84958207 + AluSx SINE Alu 1 296 -16 289 294 28 92 chr18 1031544 1031653 -84957281 + L2 LINE L2 3158 3259 -13 189 0 0 0 chr18 1031653 1031674 -84957260 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 185 373 0 0 chr18 1031674 1031741 -84957193 - MIR SINE MIR -90 118 52 2372 90 0 0 chr18 1031752 1032041 -84956893 - AluSg SINE Alu -21 289 1 549 183 29 0 chr18 1032150 1032254 -84956680 - MLT2B1 LTR ERVL -14 506 400 2425 70 10 10 chr18 1032364 1032676 -84956258 - AluSx SINE Alu 0 312 1 2193 122 0 0 chr18 1032706 1033001 -84955933 + AluSx SINE Alu 1 295 -17 29 28 0 0 chr18 1033730 1033766 -84955168 + AT_rich Low_complexity Low_complexity 1 36 0 1889 135 7 30 chr18 1033920 1034217 -84954717 + AluSx SINE Alu 6 295 -17 1845 170 0 19 chr18 1034583 1034894 -84954040 + AluJo SINE Alu 6 310 -2 1967 139 16 3 chr18 1035056 1035365 -84953569 + AluSq SINE Alu 1 313 0 2200 113 0 0 chr18 1035372 1035656 -84953278 + AluSq SINE Alu 1 284 -29 22 0 0 0 chr18 1035973 1035995 -84952939 + AT_rich Low_complexity Low_complexity 1 22 0 1908 128 30 27 chr18 1036246 1036544 -84952390 + AluSx SINE Alu 1 299 -13 2229 135 47 39 chr18 1036547 1036931 -84952003 + MSTC LTR MaLR 42 428 0 213 302 47 12 chr18 1037047 1037133 -84951801 + L2 LINE L2 2562 2650 -664 2279 97 3 3 chr18 1037282 1037582 -84951352 + AluSq SINE Alu 1 300 -13 382 350 133 44 chr18 1037621 1037938 -84950996 + L2 LINE L2 2913 3257 -15 493 286 79 21 chr18 1037957 1038146 -84950788 + MIR SINE MIR 26 225 -37 23 0 0 0 chr18 1038863 1038886 -84950048 + AT_rich Low_complexity Low_complexity 1 23 0 1783 137 49 0 chr18 1039014 1039277 -84949657 - AluSx SINE Alu -36 276 1 21 0 0 0 chr18 1039374 1039395 -84949539 + AT_rich Low_complexity Low_complexity 1 21 0 758 159 16 8 chr18 1039407 1039533 -84949401 + FLAM_A SINE Alu 10 136 -6 198 0 0 0 chr18 1039686 1039708 -84949226 + (CA)n Simple_repeat Simple_repeat 2 23 0 2216 115 10 0 chr18 1039905 1040209 -84948725 - AluSq SINE Alu -6 307 1 22 0 0 0 chr18 1040526 1040548 -84948386 + AT_rich Low_complexity Low_complexity 1 22 0 652 236 13 92 chr18 1040554 1040753 -84948181 - MIR SINE MIR -47 215 35 2080 199 56 54 chr18 1040753 1041255 -84947679 - MLT1D LTR MaLR -2 503 1 652 236 13 92 chr18 1041255 1041284 -84947650 - MIR SINE MIR -227 35 5 261 79 26 0 chr18 1041374 1041412 -84947522 - MER30B DNA MER1_type -5 185 147 1539 172 37 10 chr18 1041992 1042289 -84946645 - AluJo SINE Alu -3 309 5 412 252 67 89 chr18 1043177 1043384 -84945550 + MIR SINE MIR 16 216 -46 2082 130 3 13 chr18 1043583 1043898 -84945036 - AluSx SINE Alu 0 312 1 277 253 67 0 chr18 1044750 1044825 -84944109 - L2 LINE L2 0 3313 3234 656 232 61 5 chr18 1044852 1045050 -84943884 + L1ME3A LINE L1 5262 5470 -692 1225 114 0 0 chr18 1045057 1045224 -84943710 + AluSg/x SINE Alu 127 293 -17 1474 227 161 35 chr18 1045224 1045606 -84943328 + L1ME3A LINE L1 5481 5813 -357 1894 172 0 7 chr18 1045606 1045908 -84943026 - AluJb SINE Alu -12 300 1 1474 227 161 35 chr18 1045908 1046128 -84942806 + L1ME3A LINE L1 5813 6159 -11 894 220 54 45 chr18 1046216 1046439 -84942495 - MIR SINE MIR -34 228 4 2470 246 115 23 chr18 1046445 1047291 -84941643 - L2 LINE L2 -383 2931 2001 2252 100 0 3 chr18 1047291 1047590 -84941344 + AluSg SINE Alu 1 298 -12 2470 246 115 23 chr18 1047590 1047613 -84941321 - L2 LINE L2 -1313 2001 1982 2394 93 3 3 chr18 1048690 1048992 -84939942 + AluSx SINE Alu 1 302 -10 2169 109 3 3 chr18 1049093 1049386 -84939548 + AluSp SINE Alu 1 293 -20 1473 168 78 4 chr18 1049595 1049863 -84939071 + AluJb SINE Alu 1 288 -24 2136 130 0 7 chr18 1050042 1050341 -84938593 - AluSq SINE Alu -16 297 1 595 240 56 46 chr18 1050404 1050600 -84938334 - AluSg/x SINE Alu -16 294 97 467 296 69 46 chr18 1050640 1050900 -84938034 + L1MEc LINE L1 100 365 -6031 2152 230 68 42 chr18 1051099 1051163 -84937771 + L1M4 LINE L1 3556 3617 -2529 2125 91 0 36 chr18 1051163 1051470 -84937464 + AluSg SINE Alu 1 296 -14 2152 230 68 42 chr18 1051470 1052161 -84936773 + L1M4 LINE L1 3617 4330 -1816 23 0 0 0 chr18 1052316 1052339 -84936595 + AT_rich Low_complexity Low_complexity 1 23 0 283 308 113 8 chr18 1052356 1052489 -84936445 - LTR33 LTR ERVL -76 445 299 242 273 45 0 chr18 1052718 1052784 -84936150 - MLT1K LTR MaLR -3 585 517 2063 99 11 0 chr18 1053379 1053652 -84935282 - AluSx SINE Alu -16 296 21 2458 64 3 0 chr18 1053709 1054004 -84934930 - AluY SINE Alu -15 296 1 1972 129 4 4 chr18 1054035 1054315 -84934619 + AluJb SINE Alu 1 280 -32 2459 32 0 3 chr18 1054894 1055211 -84933723 + AluY SINE Alu 1 316 0 2630 43 0 0 chr18 1056448 1056749 -84932185 + AluY SINE Alu 1 301 -10 181 337 116 21 chr18 1058652 1058747 -84930187 + MIR SINE MIR 32 135 -73 1842 158 3 32 chr18 1059006 1059317 -84929617 - AluJb SINE Alu -10 302 1 330 329 94 13 chr18 1059603 1059752 -84929182 + L2 LINE L2 2891 3051 -221 830 145 0 22 chr18 1059967 1060105 -84928829 - L1PB3 LINE L1 -3 6151 6017 736 201 7 7 chr18 1060223 1060367 -84928567 - L1PA16 LINE L1 -1 6165 6022 2377 93 3 0 chr18 1060392 1060693 -84928241 - AluSp SINE Alu -11 302 1 1027 106 0 0 chr18 1060695 1060827 -84928107 - AluSp SINE Alu -181 132 1 1311 122 70 185 chr18 1062075 1062223 -84926711 + MER2 DNA MER2_type 2 165 -180 183 42 0 0 chr18 1062223 1062247 -84926687 + (TTG)n Simple_repeat Simple_repeat 2 25 0 2117 133 0 0 chr18 1062249 1062542 -84926392 - AluSx SINE Alu -19 293 1 1311 122 70 185 chr18 1062542 1062572 -84926362 + MER2 DNA MER2_type 166 198 -147 3813 45 9 2 chr18 1062572 1063014 -84925920 + L1PA5 LINE L1 5707 6151 -3 1311 122 70 185 chr18 1063014 1063215 -84925719 + MER2 DNA MER2_type 198 341 -4 2321 106 0 0 chr18 1063244 1063546 -84925388 - AluSq SINE Alu -11 302 1 1371 161 54 50 chr18 1064372 1064709 -84924225 + MER33 DNA MER1_type 1 324 0 225 247 153 12 chr18 1064726 1064811 -84924123 - MIR SINE MIR -9 253 157 240 167 0 0 chr18 1064811 1064859 -84924075 + T-rich Low_complexity Low_complexity 1 48 0 1937 134 3 10 chr18 1064885 1065183 -84923751 - AluSx SINE Alu -8 304 9 2042 127 0 0 chr18 1065487 1065762 -84923172 + AluSx SINE Alu 1 275 -37 2343 72 10 16 chr18 1065763 1066069 -84922865 + AluY SINE Alu 1 304 -7 4610 84 69 34 chr18 1066090 1066366 -84922568 + L1PB2 LINE L1 5396 5661 -490 2205 110 3 0 chr18 1066366 1066665 -84922269 + AluSx SINE Alu 1 300 -12 4610 84 69 34 chr18 1066665 1067022 -84921912 + L1PB2 LINE L1 5661 6060 -91 1562 82 0 24 chr18 1067022 1067228 -84921706 + AluSg/x SINE Alu 101 301 -11 4610 84 69 34 chr18 1067228 1067322 -84921612 + L1PB2 LINE L1 6060 6149 -2 1895 170 0 7 chr18 1067379 1067685 -84921249 + AluJb SINE Alu 1 304 -8 1007 147 29 135 chr18 1067764 1068009 -84920925 - MER20 DNA MER1_type 0 219 1 2154 132 0 0 chr18 1068661 1068956 -84919978 + AluSx SINE Alu 1 295 -17 440 233 11 0 chr18 1069136 1069226 -84919708 + MER58C DNA MER1_type 11 101 -114 1208 168 5 5 chr18 1069227 1069423 -84919511 - AluJb SINE Alu -29 283 88 316 139 279 0 chr18 1069461 1069540 -84919394 + MER58C DNA MER1_type 76 176 -39 983 66 0 0 chr18 1069900 1070021 -84918913 + AluY SINE Alu 1 121 -190 1686 165 67 9 chr18 1070283 1070598 -84918336 - Tigger3(Golem) DNA MER2_type -1 3028 2696 323 325 18 61 chr18 1070679 1070842 -84918092 - MIR3 SINE MIR -23 185 30 830 171 43 0 chr18 1072179 1072319 -84916615 + AluJo SINE Alu 1 146 -166 1445 103 22 35 chr18 1072321 1072553 -84916381 + AluSq SINE Alu 85 313 0 222 233 117 0 chr18 1072559 1072619 -84916315 - L2 LINE L2 -54 3259 3193 659 274 17 6 chr18 1072626 1072801 -84916133 - MIR SINE MIR 0 262 86 841 123 128 68 chr18 1072831 1073050 -84915884 - MER33 DNA MER1_type 0 324 93 1315 115 0 0 chr18 1073053 1073227 -84915707 + AluSx SINE Alu 3 176 -136 566 45 0 0 chr18 1073227 1073293 -84915641 - MER33 DNA MER1_type -216 108 43 1139 169 0 0 chr18 1073433 1073611 -84915323 + AluSg/x SINE Alu 134 311 -1 25 0 0 0 chr18 1073637 1073662 -84915272 + AT_rich Low_complexity Low_complexity 1 25 0 787 200 86 0 chr18 1073665 1073805 -84915129 + FAM SINE Alu 1 152 -33 276 30 0 0 chr18 1073806 1073839 -84915095 + (TC)n Simple_repeat Simple_repeat 2 34 0 259 130 0 0 chr18 1073855 1073901 -84915033 + LTR66 LTR ERVL 394 439 -171 210 37 0 0 chr18 1073933 1073960 -84914974 + (CAG)n Simple_repeat Simple_repeat 2 28 0 844 119 7 63 chr18 1073963 1074106 -84914828 + FLAM_C SINE Alu 7 141 -2 951 311 154 38 chr18 1074305 1074511 -84914423 - L2 LINE L2 -64 3249 3068 1971 121 7 23 chr18 1074511 1074817 -84914117 - AluSx SINE Alu -11 301 1 951 311 154 38 chr18 1074817 1075456 -84913478 - L2 LINE L2 -245 3068 2301 2175 112 3 0 chr18 1075456 1075750 -84913184 + AluSx SINE Alu 1 295 -17 1391 125 101 0 chr18 1075807 1076055 -84912879 + L1MA8 LINE L1 5998 6270 -21 2084 143 0 0 chr18 1076278 1076578 -84912356 - AluSx SINE Alu -9 303 4 2019 158 0 7 chr18 1076832 1077130 -84911804 + AluSx SINE Alu 1 296 -16 180 310 42 14 chr18 1077235 1077306 -84911628 + L2 LINE L2 2689 2761 -553 417 294 35 161 chr18 1078286 1078651 -84910283 + L2 LINE L2 2851 3142 -130 1176 187 43 5 chr18 1078651 1078860 -84910074 + MER20 DNA MER1_type 1 217 -2 417 294 35 161 chr18 1078860 1078977 -84909957 + L2 LINE L2 3142 3272 0 2462 50 3 17 chr18 1079365 1079666 -84909268 - AluY SINE Alu -14 297 1 2268 109 0 13 chr18 1079715 1080028 -84908906 - AluSq SINE Alu -4 309 1 2166 138 0 0 chr18 1080049 1080361 -84908573 - AluSx SINE Alu 0 312 1 1691 159 12 27 chr18 1080507 1080841 -84908093 + L1MB8 LINE L1 5817 6145 -33 2254 105 3 3 chr18 1081758 1082054 -84906880 - AluSx SINE Alu -16 296 1 795 206 17 120 chr18 1082163 1082455 -84906479 + L1MC4 LINE L1 7750 8011 -31 222 314 0 0 chr18 1082546 1082597 -84906337 + L2 LINE L2 3210 3260 -12 358 179 112 69 chr18 1084402 1084503 -84904431 + FLAM_A SINE Alu 11 93 -40 326 346 164 5 chr18 1085074 1085282 -84903652 + MIR SINE MIR 10 250 -12 2060 115 3 3 chr18 1086026 1086313 -84902621 + AluSx SINE Alu 2 288 -24 1802 124 6 60 chr18 1086333 1086648 -84902286 + AluSq SINE Alu 1 298 -15 393 296 15 23 chr18 1086825 1086957 -84901977 - MER20B DNA MER1_type -652 131 1 239 350 20 10 chr18 1087332 1087436 -84901498 + MIR SINE MIR 102 207 -55 341 220 211 46 chr18 1087611 1087720 -84901214 - MER5A DNA MER1_type -16 173 47 199 319 142 0 chr18 1087765 1087906 -84901028 + MIR SINE MIR 75 235 -27 880 153 0 0 chr18 1088821 1088952 -84899982 + FLAM_C SINE Alu 2 132 -1 1434 130 4 63 chr18 1089053 1089188 -84899746 + AluSx SINE Alu 12 129 -183 1930 98 30 4 chr18 1089188 1089453 -84899481 + AluSc SINE Alu 18 289 -20 1434 130 4 63 chr18 1089453 1089556 -84899378 + AluSx SINE Alu 129 236 -76 233 250 0 43 chr18 1089576 1089668 -84899266 + HAL1b LINE L1 640 727 -621 258 221 59 0 chr18 1089685 1089753 -84899181 + L1M4 LINE L1 4466 4537 -1609 1359 205 40 91 chr18 1089753 1090173 -84898761 - MLT1E1 LTR MaLR -78 576 178 288 0 0 0 chr18 1091064 1091096 -84897838 + (TAA)n Simple_repeat Simple_repeat 2 33 0 2041 134 0 3 chr18 1091101 1091391 -84897543 + AluSq SINE Alu 1 289 -24 806 234 26 5 chr18 1091425 1091617 -84897317 - MLT1E1 LTR MaLR -458 196 1 2171 101 3 3 chr18 1092271 1092557 -84896377 - AluSq SINE Alu -27 286 1 937 130 0 22 chr18 1092880 1093018 -84895916 - AluJo SINE Alu -177 135 1 942 230 28 16 chr18 1093312 1093560 -84895374 + L1ME2 LINE L1 3359 3609 -2537 2733 198 76 30 chr18 1093574 1094321 -84894613 + L1ME2 LINE L1 4035 4816 -1330 1411 78 0 11 chr18 1094330 1094521 -84894413 + AluSg/x SINE Alu 117 305 -7 3517 207 67 22 chr18 1094522 1095762 -84893172 + L1ME2 LINE L1 4866 6155 -9 2474 84 0 0 chr18 1096771 1097079 -84891855 - AluY SINE Alu -3 308 1 2283 92 0 0 chr18 1097081 1097384 -84891550 + MER4E LTR ERV1 464 766 0 1391 162 11 38 chr18 1097496 1097761 -84891173 - MER44D DNA MER2_type 0 605 293 1164 194 22 22 chr18 1098159 1098381 -84890553 - MER44D DNA MER2_type -404 301 80 2291 94 0 7 chr18 1098382 1098681 -84890253 - AluSx SINE Alu -15 297 1 310 200 0 0 chr18 1098681 1098741 -84890193 + L1MC4 LINE L1 5894 5953 -2089 405 297 113 30 chr18 1098795 1099137 -84889797 - L2 LINE L2 -249 3023 2068 248 150 0 0 chr18 1099157 1099197 -84889737 - MER49 LTR ERV1 -2 921 882 1296 169 21 29 chr18 1099197 1099440 -84889494 + AluJo SINE Alu 1 241 -71 401 202 219 0 chr18 1099688 1099807 -84889127 + MIR SINE MIR 26 170 -92 851 140 7 28 chr18 1099807 1099950 -84888984 + FLAM_C SINE Alu 1 140 -3 1484 197 3 26 chr18 1099952 1100257 -84888677 + AluJb SINE Alu 1 298 -14 2280 95 0 7 chr18 1101332 1101628 -84887306 + AluSx SINE Alu 1 294 -18 234 342 0 0 chr18 1102047 1102126 -84886808 + MLT1I LTR MaLR 73 151 -258 2004 120 25 0 chr18 1102151 1102434 -84886500 + AluSx SINE Alu 1 290 -22 21 0 0 0 chr18 1102434 1102455 -84886479 + AT_rich Low_complexity Low_complexity 1 21 0 1006 155 92 0 chr18 1102464 1102638 -84886296 + AluSg/x SINE Alu 121 310 0 407 209 113 26 chr18 1102984 1103099 -84885835 - L2 LINE L2 -1 3312 3188 1252 168 141 38 chr18 1103488 1103588 -84885346 + AluJb SINE Alu 1 89 -213 2399 89 0 10 chr18 1103588 1103901 -84885033 + AluSg SINE Alu 1 310 0 1252 168 141 38 chr18 1103901 1104062 -84884872 + AluJb SINE Alu 89 289 -13 814 157 85 20 chr18 1104840 1104993 -84883941 + FRAM SINE Alu 4 166 -10 1642 130 11 19 chr18 1105008 1105277 -84883657 + AluSx SINE Alu 2 268 -44 339 304 9 26 chr18 1105430 1105545 -84883389 + MIR SINE MIR 13 125 -137 25 31 0 0 chr18 1105606 1105638 -84883296 + AT_rich Low_complexity Low_complexity 1 32 0 2049 146 0 0 chr18 1105779 1106073 -84882861 - AluSg SINE Alu -16 294 1 862 123 0 36 chr18 1107224 1107362 -84881572 - FLAM_C SINE Alu 0 133 1 1527 179 33 4 chr18 1107857 1108177 -84880757 - AluJb SINE Alu 0 328 1 1262 165 23 5 chr18 1108246 1108464 -84880470 + AluJb SINE Alu 89 310 -2 1968 143 0 0 chr18 1108501 1108794 -84880140 + AluSx SINE Alu 1 293 -19 791 217 6 11 chr18 1109191 1109371 -84879563 - L1MC4 LINE L1 -374 7668 7490 1509 172 0 44 chr18 1110065 1110361 -84878573 - AluJo SINE Alu -5 307 25 381 324 64 12 chr18 1110367 1110540 -84878394 - MIR3 SINE MIR -9 199 18 2342 79 0 3 chr18 1110574 1110865 -84878069 + AluSq SINE Alu 1 290 -23 252 314 51 8 chr18 1111720 1111838 -84877096 - MIR3 SINE MIR -29 179 57 2106 108 71 40 chr18 1111845 1112198 -84876736 + THE1B LTR MaLR 1 364 0 1891 142 42 3 chr18 1112454 1112742 -84876192 + AluSx SINE Alu 1 299 -13 992 179 6 6 chr18 1112742 1112921 -84876013 + AluJb SINE Alu 134 312 0 815 120 24 0 chr18 1114701 1114826 -84874108 - AluSg/x SINE Alu -19 293 166 2240 92 0 0 chr18 1114933 1115216 -84873718 - AluSg SINE Alu -27 283 1 1218 126 0 11 chr18 1115638 1115812 -84873122 - FRAM SINE Alu -11 165 1 2054 243 106 21 chr18 1116105 1116776 -84872158 - L2 LINE L2 -2081 1233 506 2287 69 0 0 chr18 1116980 1117256 -84871678 + AluY SINE Alu 1 276 -35 270 304 22 22 chr18 1117358 1117450 -84871484 - MIR SINE MIR -165 97 6 204 284 37 12 chr18 1118431 1118512 -84870422 - MIR SINE MIR -123 139 57 325 250 119 54 chr18 1118722 1118890 -84870044 - MLT1L LTR MaLR -102 513 335 2108 127 0 10 chr18 1118984 1119284 -84869650 + AluSx SINE Alu 1 297 -15 507 218 75 7 chr18 1119914 1120111 -84868823 - L1MEc LINE L1 -3659 2881 2660 468 282 128 36 chr18 1120086 1120579 -84868355 - L1MEc LINE L1 -3997 2724 2187 * 614 237 178 59 chr18 1120616 1120683 -84868251 - L1MEc LINE L1 -4707 1833 1775 2590 93 0 43 chr18 1120683 1120825 -84868109 - MER46B DNA MER2_type -2496 235 88 1804 135 50 3 chr18 1120825 1121107 -84867827 + AluJb SINE Alu 1 295 -17 2590 93 0 43 chr18 1121107 1121303 -84867631 - MER46B DNA MER2_type -2643 88 37 2133 130 3 0 chr18 1121303 1121596 -84867338 - AluSg SINE Alu -16 294 1 2590 93 0 43 chr18 1121596 1121632 -84867302 - MER46B DNA MER2_type -2694 37 1 614 237 178 59 chr18 1121632 1122036 -84866898 - L1MEc LINE L1 -4765 1775 1306 1100 99 0 7 chr18 1122039 1122213 -84866721 + AluSg/x SINE Alu 137 309 0 266 183 27 30 chr18 1122368 1122448 -84866486 + MER21B LTR ERV1 630 783 -148 1675 178 7 14 chr18 1122488 1122781 -84866153 + AluJo SINE Alu 1 291 -21 2227 120 53 39 chr18 1122808 1123167 -84865767 + THE1B LTR MaLR 1 364 0 2446 56 3 16 chr18 1123735 1124040 -84864894 + AluY SINE Alu 1 301 -10 2140 49 4 0 chr18 1124287 1124534 -84864400 - L1PA5 LINE L1 -8 6146 5899 2760 7 3 0 chr18 1124827 1125125 -84863809 - AluY SINE Alu -12 299 1 2034 96 0 84 chr18 1125288 1125611 -84863323 - AluSx SINE Alu -16 296 1 704 139 0 0 chr18 1128164 1128265 -84860669 + AluS SINE Alu 2 102 -211 180 0 0 0 chr18 1128367 1128387 -84860547 + (A)n Simple_repeat Simple_repeat 1 20 0 2202 95 10 7 chr18 1128560 1128855 -84860079 + AluSx SINE Alu 5 300 -12 662 52 21 31 chr18 1129915 1130011 -84858923 + AluY SINE Alu 2 96 -222 287 43 0 0 chr18 1130111 1130152 -84858782 - AluY SINE Alu -264 36 1 274 274 83 65 chr18 1130195 1130363 -84858571 - L2 LINE L2 -1313 2001 1831 468 263 29 57 chr18 1130496 1130705 -84858229 + MLT1L LTR MaLR 6 208 -407 998 204 68 109 chr18 1131047 1131613 -84857321 - L1ME LINE L1 -683 5479 4963 1615 192 18 3 chr18 1131613 1131899 -84857035 - AluJb SINE Alu -22 290 1 998 204 68 109 chr18 1131899 1132080 -84856854 - L1ME LINE L1 -1199 4963 4776 229 121 0 0 chr18 1132180 1132213 -84856721 + Alu SINE Alu 189 221 -81 536 198 0 0 chr18 1132215 1132301 -84856633 - AluJ/FLAM SINE Alu -225 87 2 578 294 87 9 chr18 1132449 1132680 -84856254 - MIR SINE MIR -12 250 2 1548 183 41 117 chr18 1133049 1133132 -84855802 + LTR2 LTR ERV1 41 129 -320 261 0 0 0 chr18 1133132 1133161 -84855773 + (TAA)n Simple_repeat Simple_repeat 2 30 0 1548 183 41 117 chr18 1133161 1133520 -84855414 + LTR2 LTR ERV1 129 449 0 502 271 42 42 chr18 1133520 1133712 -84855222 + L2 LINE L2 2875 3066 -247 387 228 25 0 chr18 1133847 1133926 -84855008 + MER91A DNA MER1_type 15 95 -101 296 297 22 0 chr18 1133996 1134087 -84854847 + L2 LINE L2 3179 3271 -1 313 113 0 32 chr18 1134114 1134176 -84854758 - AluSp/q SINE Alu -4 299 240 1898 106 19 0 chr18 1134279 1134544 -84854390 - AluSp SINE Alu -43 270 1 354 283 7 65 chr18 1134826 1134964 -84853970 - MIR SINE MIR -26 236 107 1457 163 105 0 chr18 1135013 1135270 -84853664 + AluJb SINE Alu 1 284 -28 316 106 21 0 chr18 1136528 1136575 -84852359 - AluSp/q SINE Alu -16 287 240 2284 94 0 3 chr18 1136645 1136952 -84851982 - AluSc SINE Alu -3 306 1 1783 191 0 0 chr18 1136967 1137250 -84851684 - AluJo SINE Alu -29 283 1 1389 244 76 33 chr18 1137350 1138063 -84850871 + L1MC4 LINE L1 6883 7668 -239 310 213 13 13 chr18 1138172 1138255 -84850679 - MLT1B LTR MaLR -36 431 272 1004 110 117 0 chr18 1138859 1139004 -84849930 + U1 snRNA snRNA 3 164 -1 23 33 0 0 chr18 1139037 1139067 -84849867 + AT_rich Low_complexity Low_complexity 1 30 0 215 329 169 27 chr18 1139095 1139314 -84849620 + L3 LINE CR1 35 284 -1293 192 286 250 24 chr18 1139338 1139506 -84849428 + L3 LINE CR1 1367 1572 -5 311 244 28 61 chr18 1139701 1139912 -84849022 - L1M LINE L1 -757 5389 5208 1968 120 41 0 chr18 1140214 1140505 -84848429 - AluSg SINE Alu -7 303 1 1933 116 18 0 chr18 1140946 1141223 -84847711 + AluSx SINE Alu 1 282 -30 2388 77 0 7 chr18 1141483 1141783 -84847151 + AluSc SINE Alu 1 298 -11 1554 101 10 5 chr18 1141838 1142047 -84846887 + AluSx SINE Alu 1 210 -102 996 102 8 0 chr18 1142147 1142274 -84846660 - AluSg SINE Alu -182 128 1 21 0 0 0 chr18 1142490 1142511 -84846423 + AT_rich Low_complexity Low_complexity 1 21 0 1865 134 38 0 chr18 1142511 1142803 -84846131 - L1PA16 LINE L1 -9 6157 5855 377 293 23 30 chr18 1143408 1143541 -84845393 - MIR3 SINE MIR -25 183 52 3956 145 3 26 chr18 1143839 1144443 -84844491 - MER49 LTR ERV1 -255 668 78 2182 106 7 0 chr18 1144443 1144735 -84844199 + AluSq SINE Alu 6 299 -14 3956 145 3 26 chr18 1144735 1144779 -84844155 - MER49 LTR ERV1 -845 78 35 348 139 97 0 chr18 1144780 1144852 -84844082 - L1MB2 LINE L1 -213 5958 5880 1479 97 0 0 chr18 1145938 1146124 -84842810 + AluSx SINE Alu 1 186 -126 312 167 0 0 chr18 1146128 1146176 -84842758 + AluSx SINE Alu 234 281 -21 2326 81 0 16 chr18 1146279 1146587 -84842347 + AluSg SINE Alu 1 303 -7 2099 109 3 3 chr18 1146799 1147082 -84841852 + AluSx SINE Alu 1 283 -29 1846 161 3 86 chr18 1348116 1348500 -84640434 + MLT1A1 LTR MaLR 12 363 -2 394 374 4 8 chr18 1348500 1348746 -84640188 + MER89-int LTR ERV1 6199 6443 -358 998 273 13 0 chr18 1348762 1349000 -84639934 + HERVL40 LTR ERVL 5287 5527 -3 377 248 80 40 chr18 1349002 1349127 -84639807 + LTR40a LTR ERVL 1 130 -389 655 303 96 19 chr18 1349209 1349575 -84639359 + LTR40a LTR ERVL 122 515 -4 740 194 45 28 chr18 1349584 1349831 -84639103 - L1MEc LINE L1 -3694 2846 2596 449 319 77 19 chr18 1349835 1350145 -84638789 - L1MEc LINE L1 -4177 2544 2217 808 289 57 52 chr18 1350251 1350871 -84638063 - L1MEc LINE L1 -4561 1979 1357 2000 191 54 7 chr18 1351432 1351841 -84637093 + MSTB1 LTR MaLR 5 432 0 192 247 153 24 chr18 1352253 1352338 -84636596 + MIR SINE MIR 92 187 -75 529 313 58 82 chr18 1353345 1353636 -84635298 + L2 LINE L2 2985 3268 -4 1779 203 116 138 chr18 1354204 1354525 -84634409 - MER63C DNA MER1_type -130 930 603 1745 187 3 0 chr18 1354525 1354830 -84634104 - AluJb SINE Alu -6 306 1 1779 203 116 138 chr18 1354830 1355459 -84633475 - MER63C DNA MER1_type -457 603 1 359 193 12 0 chr18 1355597 1355680 -84633254 + (TG)n Simple_repeat Simple_repeat 1 84 0 1139 261 46 42 chr18 1355682 1356138 -84632796 - L1ME3 LINE L1 -7 6155 5698 417 302 111 25 chr18 1357763 1358165 -84630769 - L2 LINE L2 0 3313 2155 353 245 0 19 chr18 1358507 1358613 -84630321 - L1MC4 LINE L1 -31 8011 7908 384 135 22 11 chr18 1358613 1358702 -84630232 + (TCTA)n Simple_repeat Simple_repeat 2 91 0 2011 253 72 33 chr18 1358731 1359550 -84629384 + L1MC4 LINE L1 6875 7725 -317 24 32 0 0 chr18 1359851 1359882 -84629052 + AT_rich Low_complexity Low_complexity 1 31 0 390 332 21 12 chr18 1359979 1360146 -84628788 - MIR SINE MIR -60 148 30 3567 172 81 19 chr18 1360301 1361038 -84627896 + LTR39 LTR ERV1 1 783 0 204 324 0 40 chr18 1361177 1361251 -84627683 + L2 LINE L2 3198 3268 -4 839 211 31 52 chr18 1362769 1362963 -84625971 + MER58A DNA MER1_type 34 223 -1 459 0 0 0 chr18 1363024 1363075 -84625859 + (CA)n Simple_repeat Simple_repeat 1 51 0 436 305 63 5 chr18 1363453 1363643 -84625291 + MLT1J2 LTR MaLR 34 234 -216 299 299 46 0 chr18 1363694 1363781 -84625153 + MLT1I LTR MaLR 319 409 0 235 305 0 0 chr18 1364226 1364308 -84624626 - L1M4 LINE L1 -2113 4102 4021 1953 144 7 0 chr18 1364388 1364686 -84624248 - AluJb SINE Alu -12 300 1 204 343 93 29 chr18 1364766 1364906 -84624028 + L2 LINE L2 3161 3309 -4 1918 153 85 15 chr18 1365076 1365476 -84623458 + MSTA LTR MaLR 1 428 0 238 352 11 11 chr18 1367984 1368072 -84620862 + MIR3 SINE MIR 67 154 -54 2019 243 108 8 chr18 1368222 1368815 -84620119 - MLT1E1 LTR MaLR 0 654 3 274 330 51 95 chr18 1369301 1369595 -84619339 - L2 LINE L2 0 3272 2992 298 324 175 31 chr18 1369964 1370500 -84618434 + L2 LINE L2 2715 3313 0 212 286 86 0 chr18 1371930 1372000 -84616934 - L2 LINE L2 -15 3298 3223 296 232 71 61 chr18 1372367 1372531 -84616403 - MIR SINE MIR -62 200 41 1914 139 0 3 chr18 1374747 1375050 -84613884 - AluSg SINE Alu -8 302 1 2152 131 0 3 chr18 1375648 1375961 -84612973 + AluSx SINE Alu 1 312 0 238 290 109 22 chr18 1376073 1376211 -84612723 - L1MC4 LINE L1 -112 7930 7781 556 260 74 7 chr18 1376245 1376425 -84612509 - L1ME3 LINE L1 -136 6028 5833 1203 280 82 5 chr18 1376521 1376889 -84612045 + MLT1G LTR MaLR 192 587 -3 2321 274 17 30 chr18 1376896 1377878 -84611056 - L1MEc LINE L1 -3185 3030 2096 2410 195 33 25 chr18 1378070 1378839 -84610095 + L1MC/D LINE L1 4978 5761 -583 927 204 20 59 chr18 1378861 1379116 -84609818 - L1MB3 LINE L1 -478 5705 5461 2347 158 16 49 chr18 1379117 1379611 -84609323 + L1MB3 LINE L1 5704 6181 -2 235 89 244 0 chr18 1379626 1379671 -84609263 + L1MC/D LINE L1 5826 5881 -463 313 259 44 37 chr18 1379724 1379768 -84609166 - L1MA9 LINE L1 0 6312 6269 2192 252 46 40 chr18 1379768 1380414 -84608520 - L1ME1 LINE L1 -44 6105 5453 459 0 0 0 chr18 1380414 1380465 -84608469 + (TG)n Simple_repeat Simple_repeat 2 52 0 2192 252 46 40 chr18 1380465 1380701 -84608233 - L1ME1 LINE L1 -696 5453 5220 323 155 48 0 chr18 1380719 1380803 -84608131 + (TA)n Simple_repeat Simple_repeat 2 89 0 394 219 116 45 chr18 1380856 1381011 -84607923 - L1ME1 LINE L1 -901 5228 5063 738 235 25 39 chr18 1381035 1381239 -84607695 - L1ME1 LINE L1 -1163 4966 4766 855 296 46 7 chr18 1382748 1383055 -84605879 + MER110 LTR ERV1 166 484 -7 273 286 0 0 chr18 1383162 1383239 -84605695 - L1ME1 LINE L1 -5084 1035 959 527 367 24 0 chr18 1383522 1383729 -84605205 - LTR16B LTR ERVL -245 219 8 21 0 0 0 chr18 1385058 1385079 -84603855 + AT_rich Low_complexity Low_complexity 1 21 0 2210 90 0 10 chr18 1385126 1385448 -84603486 + AluY SINE Alu 1 311 0 196 286 36 80 chr18 1387344 1387456 -84601478 - MIR3 SINE MIR -7 201 95 385 229 74 82 chr18 1387580 1387702 -84601232 - L2 LINE L2 0 3313 3193 297 75 0 0 chr18 1387757 1387797 -84601137 + (TG)n Simple_repeat Simple_repeat 1 40 0 654 360 99 26 chr18 1387919 1388616 -84600318 - L2 LINE L2 -339 2975 2228 2164 115 0 3 chr18 1390060 1390372 -84598562 - AluSx SINE Alu 0 312 2 364 209 33 0 chr18 1390424 1390515 -84598419 + LTR37B LTR ERV1 224 317 -151 977 255 91 68 chr18 1391218 1391747 -84597187 + MLT1F LTR MaLR 1 541 -1 25 31 0 0 chr18 1392050 1392082 -84596852 + AT_rich Low_complexity Low_complexity 1 32 0 252 0 0 0 chr18 1392628 1392656 -84596278 + (TG)n Simple_repeat Simple_repeat 2 29 0 1408 211 7 7 chr18 1392656 1392941 -84595993 - AluJo SINE Alu -27 285 1 362 257 114 89 chr18 1393304 1393787 -84595147 + MER31-int LTR ERV1 2408 2902 -2034 7384 92 0 45 chr18 1394618 1395597 -84593337 - L1P LINE L1 -1262 4884 3962 1781 97 0 4 chr18 1395597 1395845 -84593089 - L1PA7 LINE L1 0 6154 5908 7384 92 0 45 chr18 1395845 1396004 -84592930 - L1P LINE L1 -2184 3962 3797 27 0 0 0 chr18 1396006 1396033 -84592901 + AT_rich Low_complexity Low_complexity 1 27 0 424 286 62 54 chr18 1396337 1396578 -84592356 + MER31-int LTR ERV1 3818 4060 -876 237 259 42 77 chr18 1396824 1396943 -84591991 + LTR37B LTR ERV1 154 269 -199 2684 133 14 5 chr18 1396943 1397373 -84591561 - MER57B LTR ERV1 0 434 1 237 259 42 77 chr18 1397373 1397396 -84591538 + LTR37B LTR ERV1 269 291 -177 633 102 0 20 chr18 1397930 1398028 -84590906 + MER4A LTR ERV1 3 98 -566 1900 105 158 75 chr18 1398028 1398401 -84590533 + MER4A LTR ERV1 261 664 0 24 32 0 0 chr18 1399832 1399863 -84589071 + AT_rich Low_complexity Low_complexity 1 31 0 217 96 0 58 chr18 1400012 1400064 -84588870 + (TTTTTG)n Simple_repeat Simple_repeat 4 52 0 902 264 5 5 chr18 1400155 1400363 -84588571 + MER58A DNA MER1_type 1 208 -16 3776 250 56 37 chr18 1400696 1401558 -84587376 + L1MB5 LINE L1 37 881 -5763 468 0 0 0 chr18 1401558 1401610 -84587324 + (CA)n Simple_repeat Simple_repeat 2 53 0 3776 250 56 37 chr18 1401610 1403938 -84584996 + L1MB5 LINE L1 881 3409 -3235 1038 208 91 26 chr18 1403953 1404198 -84584736 + L1MB5 LINE L1 5211 5481 -1163 2372 151 14 48 chr18 1404198 1404681 -84584253 + L1MB5 LINE L1 6206 6672 0 1038 208 91 26 chr18 1404681 1404743 -84584191 + L1MB5 LINE L1 5481 5538 -1106 1189 260 51 83 chr18 1404800 1405390 -84583544 - L2 LINE L2 0 3313 2740 2720 148 24 21 chr18 1405763 1406345 -84582589 - MER41B LTR ERV1 0 554 1 27 0 0 0 chr18 1406421 1406448 -84582486 + AT_rich Low_complexity Low_complexity 1 27 0 9964 196 50 18 chr18 1407634 1409916 -84579018 + L1MC3 LINE L1 5422 7777 -8 241 257 38 48 chr18 1410014 1410119 -84578815 - Charlie7 DNA MER1_type -1929 683 580 425 187 233 36 chr18 1410133 1410352 -84578582 - L1MDa LINE L1 -1422 5118 4857 889 223 49 23 chr18 1410356 1410661 -84578273 - L1M4 LINE L1 -895 5251 4939 2206 283 114 29 chr18 1410692 1412247 -84576687 - L1MDa LINE L1 -2296 4244 2558 2041 133 0 7 chr18 1412265 1412567 -84576367 - AluSx SINE Alu -12 300 1 415 264 36 0 chr18 1412651 1412791 -84576143 - L1MDa LINE L1 -4274 2447 2303 669 200 15 7 chr18 1412807 1412942 -84575992 - AluJo SINE Alu -176 136 1 434 296 82 18 chr18 1412942 1413384 -84575550 - L1MDa LINE L1 -4410 2311 1787 829 317 60 50 chr18 1413495 1414362 -84574572 + L1MEc LINE L1 100 975 -5421 1709 227 54 13 chr18 1414515 1414978 -84573956 - L1MB8 LINE L1 -3 6175 5694 678 62 0 10 chr18 1414994 1415090 -84573844 - L1MA2 LINE L1 0 6304 6210 2471 225 37 32 chr18 1415091 1415767 -84573167 + L1MA5A LINE L1 3544 4222 -1924 351 242 0 42 chr18 1415788 1415883 -84573051 + L1MC4 LINE L1 6613 6703 -1339 351 233 33 22 chr18 1415920 1416010 -84572924 + L1MC4 LINE L1 6613 6703 -1339 261 269 0 0 chr18 1416012 1416079 -84572855 + (TA)n Simple_repeat Simple_repeat 2 68 0 358 286 38 0 chr18 1416079 1416184 -84572750 + L1MC4 LINE L1 6595 6703 -1339 345 257 0 0 chr18 1416186 1416322 -84572612 + (TA)n Simple_repeat Simple_repeat 2 137 0 4704 200 23 37 chr18 1416322 1418314 -84570620 + L1MA5A LINE L1 4217 6188 -109 1076 227 58 32 chr18 1418320 1418752 -84570182 + L1M4 LINE L1 4175 4617 -1529 * 7685 21 0 0 chr18 1418743 1419647 -84569287 - L1PA2 LINE L1 -1107 5039 4136 7618 21 0 10 chr18 1419647 1420772 -84568162 + L1PA2 LINE L1 5037 6152 -3 1572 149 17 10 chr18 1420772 1421067 -84567867 - L1MA3 LINE L1 -85 6220 5924 1593 219 35 32 chr18 1421073 1421565 -84567369 + L1M4 LINE L1 4600 5092 -1054 23 0 0 0 chr18 1421587 1421610 -84567324 + AT_rich Low_complexity Low_complexity 1 23 0 736 207 22 40 chr18 1422186 1422408 -84566526 - L1MB8 LINE L1 -33 6145 5928 2819 40 8 34 chr18 1422409 1422740 -84566194 - L1PA7 LINE L1 -1 6153 5832 2540 30 0 3 chr18 1422740 1423038 -84565896 - AluY SINE Alu -14 297 1 2819 40 8 34 chr18 1423038 1423085 -84565849 - L1PA7 LINE L1 -322 5832 5785 901 181 83 9 chr18 1423085 1423307 -84565627 + L1M4 LINE L1 5121 5354 -798 417 223 46 16 chr18 1423309 1423449 -84565485 + L1MA10 LINE L1 5964 6276 -53 27 49 0 0 chr18 1424702 1424743 -84564191 + AT_rich Low_complexity Low_complexity 1 41 0 301 333 10 10 chr18 1425246 1425348 -84563586 - MER5A DNA MER1_type -50 139 38 3081 180 15 30 chr18 1426137 1426798 -84562136 + L1P LINE L1 1911 2561 -3585 229 302 13 12 chr18 1426798 1426897 -84562037 + CT-rich Low_complexity Low_complexity 1 159 0 220 288 197 0 chr18 1427155 1427221 -84561713 + L2 LINE L2 3169 3247 -25 23463 39 2 1 chr18 1427766 1431441 -84557493 - L1PA4 LINE L1 -1 6154 2479 6944 54 24 3 chr18 1431438 1433077 -84555857 + L1PA5 LINE L1 4509 6164 0 * 194 216 0 0 chr18 1433310 1433347 -84555587 + L2 LINE L2 3234 3270 -2 184 372 107 0 chr18 1433378 1433499 -84555435 + L2 LINE L2 3180 3313 0 239 220 0 17 chr18 1433610 1433669 -84555265 - LTR66 LTR ERVL -163 447 390 485 295 123 22 chr18 1434234 1434461 -84554473 + MIR SINE MIR 13 262 0 2205 101 3 7 chr18 1434724 1435032 -84553902 - AluSc SINE Alu 0 309 3 2717 105 35 5 chr18 1436027 1436428 -84552506 + MLT2A2 LTR ERVL 1 413 -40 216 0 0 0 chr18 1436428 1436452 -84552482 + (TA)n Simple_repeat Simple_repeat 2 25 0 399 91 0 0 chr18 1436469 1436524 -84552410 + MLT2A2 LTR ERVL 399 453 0 485 333 5 38 chr18 1436875 1437061 -84551873 + MER5A DNA MER1_type 1 180 -9 2203 183 14 28 chr18 1439471 1439902 -84549032 + MER67A LTR ERV1 119 543 0 297 75 0 0 chr18 1440209 1440249 -84548685 + (TG)n Simple_repeat Simple_repeat 2 41 0 297 89 0 0 chr18 1440251 1440296 -84548638 + (GA)n Simple_repeat Simple_repeat 1 45 0 1780 342 91 25 chr18 1441481 1442999 -84545935 - L2 LINE L2 -255 3058 1434 514 233 7 14 chr18 1443004 1443150 -84545784 - L1MA9 LINE L1 -253 6059 5915 704 217 40 6 chr18 1443159 1443334 -84545600 + L1MA9 LINE L1 6094 6274 -38 897 353 122 10 chr18 1443355 1443956 -84544978 - L2 LINE L2 -1884 1430 763 587 241 8 15 chr18 1443974 1444107 -84544827 - L2 LINE L2 0 3313 3182 27 29 0 0 chr18 1444144 1444178 -84544756 + AT_rich Low_complexity Low_complexity 1 34 0 481 342 50 58 chr18 1444245 1444625 -84544309 - L2 LINE L2 -461 2853 2477 2350 89 3 0 chr18 1444888 1445190 -84543744 - AluSp SINE Alu -10 303 1 696 353 47 25 chr18 1445675 1446163 -84542771 - L2 LINE L2 -2560 754 256 260 303 61 53 chr18 1446164 1446296 -84542638 - MIR SINE MIR -108 154 22 417 317 126 56 chr18 1447100 1447782 -84541152 + HAL1 LINE L1 247 976 -1531 615 281 66 34 chr18 1447833 1448243 -84540691 + HAL1 LINE L1 1053 1475 -1032 422 276 17 0 chr18 1448333 1448449 -84540485 + MIR SINE MIR 83 200 -62 308 301 98 0 chr18 1448559 1448742 -84540192 + L1ME4a LINE L1 5714 5914 -207 303 301 114 42 chr18 1451269 1451462 -84537472 + MIR SINE MIR 53 259 -3 321 282 128 24 chr18 1453574 1453971 -84534963 - L1MC/D LINE L1 -624 5546 5199 313 239 115 76 chr18 1454271 1454556 -84534378 - MLT1J2 LTR MaLR -182 367 60 27 0 0 0 chr18 1455298 1455325 -84533609 + AT_rich Low_complexity Low_complexity 1 27 0 231 218 0 0 chr18 1455379 1455434 -84533500 + (TATATG)n Simple_repeat Simple_repeat 2 56 0 231 375 42 68 chr18 1456516 1456827 -84532107 - L2 LINE L2 -248 3024 2727 30 0 0 0 chr18 1457581 1457611 -84531323 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr18 1458321 1458354 -84530580 + AT_rich Low_complexity Low_complexity 1 33 0 256 342 37 42 chr18 1458473 1458532 -84530402 + L1M4 LINE L1 2131 2189 -3957 1210 79 6 0 chr18 1458532 1458697 -84530237 - L1PA7 LINE L1 0 6154 5989 256 342 37 42 chr18 1458697 1459020 -84529914 + L1M4 LINE L1 2189 2511 -3635 * 4303 194 21 16 chr18 1459011 1460232 -84528702 + L1MB7 LINE L1 4948 6174 -10 288 298 151 9 chr18 1460392 1460610 -84528324 + L1M4 LINE L1 2690 2938 -3208 506 153 12 0 chr18 1460610 1460695 -84528239 + AluJ/FLAM SINE Alu 3 88 -224 354 239 155 44 chr18 1460697 1460923 -84528011 + L1M4 LINE L1 2930 3180 -2966 1606 108 16 0 chr18 1461008 1461259 -84527675 + L1MA5A LINE L1 6040 6294 -3 23 0 0 0 chr18 1461349 1461372 -84527562 + AT_rich Low_complexity Low_complexity 1 23 0 510 275 171 8 chr18 1461542 1461782 -84527152 - L2 LINE L2 -1638 1676 1398 569 145 22 109 chr18 1461873 1462011 -84526923 + FLAM_C SINE Alu 1 126 -17 360 0 0 0 chr18 1462013 1462053 -84526881 + (TA)n Simple_repeat Simple_repeat 2 41 0 33 0 0 0 chr18 1462221 1462254 -84526680 + AT_rich Low_complexity Low_complexity 1 33 0 661 168 0 0 chr18 1462374 1462487 -84526447 - AluSx SINE Alu -1 308 196 1190 75 0 0 chr18 1462491 1462637 -84526297 - AluSx SINE Alu -167 146 1 297 324 71 22 chr18 1462948 1463130 -84525804 - MLT2E LTR ERVL -407 221 31 225 0 0 0 chr18 1464066 1464091 -84524843 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 456 224 0 0 chr18 1464113 1464211 -84524723 + L1PA16 LINE L1 6063 6160 -6 1047 202 48 60 chr18 1464218 1464549 -84524385 - MER39 LTR ERV1 -62 645 319 2042 120 0 29 chr18 1464603 1464911 -84524023 + AluSx SINE Alu 1 299 -13 287 241 214 36 chr18 1465121 1465233 -84523701 - MER34 LTR ERV1 -410 132 1 187 375 11 23 chr18 1465233 1465321 -84523613 + L2 LINE L2 2997 3083 -189 1298 213 52 14 chr18 1465504 1465921 -84523013 - MLT1D LTR MaLR -9 496 25 24 0 0 0 chr18 1466757 1466781 -84522153 + AT_rich Low_complexity Low_complexity 1 24 0 295 314 52 13 chr18 1467354 1467559 -84521375 + L1 LINE L1 4067 4280 -1866 3277 153 81 55 chr18 1469495 1469580 -84519354 + L1MA7 LINE L1 5533 5614 -677 2043 117 3 0 chr18 1469580 1469863 -84519071 + AluSx SINE Alu 2 285 -27 3277 153 81 55 chr18 1469863 1470508 -84518426 + L1MA7 LINE L1 5614 6282 -9 225 162 0 0 chr18 1470590 1470627 -84518307 - L1M2 LINE L1 -446 5845 5809 2153 169 33 0 chr18 1471670 1472060 -84516874 - MER57A LTR ERV1 0 403 1 1699 118 20 4 chr18 1472060 1472315 -84516619 - MER57A-int LTR ERV1 0 7537 7279 476 145 137 34 chr18 1472315 1472432 -84516502 - LTR54B LTR ERV1 -367 131 3 16992 137 34 28 chr18 1472436 1474940 -84513994 - MER57A-int LTR ERV1 -394 7143 4655 1675 149 100 26 chr18 1474940 1475289 -84513645 + THE1C LTR MaLR 1 375 0 16992 137 34 28 chr18 1475289 1476213 -84512721 - MER57A-int LTR ERV1 -2882 4655 1707 577 174 0 203 chr18 1476316 1476557 -84512377 - MER57A-int LTR ERV1 -2890 3441 3250 270 214 0 29 chr18 1476734 1476804 -84512130 - MER57A-int LTR ERV1 -3681 1190 1123 2078 165 49 35 chr18 1476804 1477352 -84511582 + MLT2A2 LTR ERVL 1 554 0 385 148 0 0 chr18 1477585 1477646 -84511288 - MER34C LTR ERV1 -370 215 155 1319 150 23 10 chr18 1477881 1478214 -84510720 - MER57A-int LTR ERV1 -6695 842 444 * 1549 177 20 0 chr18 1478209 1478463 -84510471 - MER57A-int LTR ERV1 -7277 260 2 185 83 28 0 chr18 1478471 1478507 -84510427 + (TAAAA)n Simple_repeat Simple_repeat 1 37 0 2074 166 31 31 chr18 1478508 1478900 -84510034 - MER57A LTR ERV1 -11 392 1 300 295 104 22 chr18 1479105 1479288 -84509646 - MIR SINE MIR 0 262 65 7372 223 74 50 chr18 1479731 1480863 -84508071 - L1MC3 LINE L1 -153 8050 6947 1556 138 78 40 chr18 1480863 1481210 -84507724 - MER46B DNA MER2_type 0 236 2 7372 223 74 50 chr18 1481210 1482229 -84506705 - L1MC3 LINE L1 -1256 6947 5954 1436 220 0 7 chr18 1482229 1482541 -84506393 - AluJo SINE Alu 0 310 1 7372 223 74 50 chr18 1482541 1486100 -84502834 - L1MC3 LINE L1 -2249 5954 2196 1169 282 55 17 chr18 1486110 1486529 -84502405 - L1MC3 LINE L1 -5042 1003 569 28150 123 69 14 chr18 1486563 1492398 -84496536 + L1PA8 LINE L1 10 6171 -1 1481 262 67 38 chr18 1492520 1493074 -84495860 - L1MC3 LINE L1 -5475 570 1 2021 128 16 0 chr18 1495629 1495934 -84493000 + AluSx SINE Alu 2 311 -1 264 291 26 17 chr18 1496280 1496397 -84492537 - HAL1 LINE L1 -788 1719 1602 468 336 84 8 chr18 1496641 1496879 -84492055 + MIR SINE MIR 6 261 -1 182 118 29 0 chr18 1496944 1496978 -84491956 + CT-rich Low_complexity Low_complexity 3 37 0 2940 185 40 12 chr18 1497945 1498540 -84490394 + L1MB8 LINE L1 5409 6020 -158 447 226 0 0 chr18 1498542 1498657 -84490277 + L1MB8 LINE L1 6064 6178 0 228 314 50 33 chr18 1499205 1499326 -84489608 + L2 LINE L2 3191 3313 0 401 318 9 0 chr18 1500389 1500499 -84488435 - L2 LINE L2 0 3313 3203 320 380 39 0 chr18 1500579 1500708 -84488226 - MIR3 SINE MIR -15 193 60 22 0 0 0 chr18 1501677 1501699 -84487235 + AT_rich Low_complexity Low_complexity 1 22 0 694 299 35 0 chr18 1502376 1502660 -84486274 - L1M4 LINE L1 -2208 3938 3645 773 254 5 23 chr18 1502660 1502877 -84486057 - L1MD3 LINE L1 -1019 6976 6764 524 190 0 0 chr18 1502877 1502998 -84485936 + Tigger7 DNA MER2_type 2278 2398 -93 809 86 0 0 chr18 1502998 1503103 -84485831 - AluSq/x SINE Alu -208 105 1 241 260 0 0 chr18 1503103 1503153 -84485781 - L1MC/D LINE L1 -810 5534 5485 * 1153 220 10 23 chr18 1503145 1503445 -84485489 + L1MC2 LINE L1 5603 5898 -446 1306 132 19 0 chr18 1503451 1503656 -84485278 + MER2 DNA MER2_type 1 209 -136 29 47 0 0 chr18 1503669 1503712 -84485222 + AT_rich Low_complexity Low_complexity 1 43 0 2197 159 30 18 chr18 1503751 1504190 -84484744 + L1MC2 LINE L1 5901 6344 0 306 171 13 79 chr18 1504852 1504928 -84484006 + Tigger5 DNA MER2_type 2252 2322 -1 310 242 0 0 chr18 1504993 1505055 -84483879 + Tigger5 DNA MER2_type 2262 2323 0 1758 162 7 3 chr18 1505187 1505477 -84483457 + AluJb SINE Alu 1 291 -21 918 263 71 52 chr18 1505481 1506014 -84482920 - L1ME LINE L1 -340 5822 5280 209 161 32 32 chr18 1506457 1506612 -84482322 + (TA)n Simple_repeat Simple_repeat 2 156 0 44 56 0 0 chr18 1506618 1506690 -84482244 + AT_rich Low_complexity Low_complexity 1 72 0 533 102 72 6 chr18 1506690 1506857 -84482077 + (TA)n Simple_repeat Simple_repeat 2 179 0 383 104 97 32 chr18 1506868 1507022 -84481912 + (TTATA)n Simple_repeat Simple_repeat 1 164 0 368 233 29 46 chr18 1507033 1507756 -84481178 + (TATAA)n Simple_repeat Simple_repeat 1 710 0 316 165 71 29 chr18 1507673 1507843 -84481091 + (TA)n Simple_repeat Simple_repeat 2 178 0 * 337 105 29 58 chr18 1507867 1508039 -84480895 + (TATAA)n Simple_repeat Simple_repeat 3 169 0 194 177 0 48 chr18 1508665 1508727 -84480207 + T-rich Low_complexity Low_complexity 1 59 0 6254 86 7 15 chr18 1509258 1511101 -84477833 - L1PA11 LINE L1 -1 6173 4342 22 99 0 0 chr18 1511212 1511283 -84477651 + AT_rich Low_complexity Low_complexity 1 71 0 478 303 23 9 chr18 1511292 1511510 -84477424 - L1MCc LINE L1 -4916 1507 1287 239 264 254 9 chr18 1512070 1512180 -84476754 + L2 LINE L2 3176 3312 -1 28 33 0 49 chr18 1512557 1512598 -84476336 + AT_rich Low_complexity Low_complexity 1 40 -18 2964 113 9 2 chr18 1512598 1513050 -84475884 - L1MA1 LINE L1 -7 6295 5841 28 33 0 49 chr18 1513050 1513069 -84475865 + AT_rich Low_complexity Low_complexity 40 58 0 870 180 18 55 chr18 1513588 1513805 -84475129 - MER3 DNA MER1_type 0 209 1 219 387 36 30 chr18 1513946 1514114 -84474820 - MIR3 SINE MIR -38 170 2 270 275 38 38 chr18 1515270 1515350 -84473584 - L3 LINE CR1 -10 1567 1488 * 839 308 147 14 chr18 1515347 1515776 -84473158 - L2 LINE L2 -3 3310 2825 2364 82 0 15 chr18 1515814 1516145 -84472789 - LTR17 LTR ERV1 -454 326 1 2273 79 0 0 chr18 1516145 1516437 -84472497 - HERV17 LTR ERV1 0 8626 8335 * 3221 64 9 2 chr18 1516427 1516851 -84472083 - HERV17 LTR ERV1 -1078 7548 7122 455 40 14 0 chr18 1516841 1516915 -84472019 - HERV17 LTR ERV1 -1619 7007 6933 * 871 329 115 17 chr18 1516942 1517422 -84471512 - L2 LINE L2 -503 2811 2285 444 330 69 39 chr18 1517434 1517740 -84471194 - L3 LINE CR1 -100 1477 1163 3050 147 134 9 chr18 1518730 1519273 -84469661 + LTR9 LTR ERV1 2 612 0 21 0 0 0 chr18 1519704 1519725 -84469209 + AT_rich Low_complexity Low_complexity 1 21 0 28 29 0 0 chr18 1519765 1519800 -84469134 + AT_rich Low_complexity Low_complexity 1 35 0 7574 22 0 0 chr18 1519861 1520882 -84468052 - L1PA3 LINE L1 0 6155 5146 189 346 0 0 chr18 1521283 1521335 -84467599 + L2 LINE L2 3209 3260 -12 427 325 8 0 chr18 1522240 1522366 -84466568 + L2 LINE L2 3186 3312 -1 313 327 36 9 chr18 1522575 1522685 -84466249 + MIR SINE MIR 74 186 -76 21 95 0 0 chr18 1522707 1522770 -84466164 + AT_rich Low_complexity Low_complexity 1 63 0 207 265 72 24 chr18 1522770 1522853 -84466081 - L2 LINE L2 -5 3267 3181 21 0 0 0 chr18 1522916 1522937 -84465997 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 1522970 1522998 -84465936 + AT_rich Low_complexity Low_complexity 1 28 0 718 254 85 33 chr18 1523757 1523996 -84464938 - MLT2B1 LTR ERVL -1 519 215 2155 135 0 0 chr18 1524082 1524394 -84464540 - AluSx SINE Alu 0 312 1 5576 130 16 17 chr18 1525271 1525869 -84463065 - MER4D LTR ERV1 -7 896 298 1995 160 0 0 chr18 1525869 1526175 -84462759 - AluSx SINE Alu -6 306 1 5576 130 16 17 chr18 1526175 1526473 -84462461 - MER4D LTR ERV1 -605 298 1 2208 164 31 64 chr18 1526963 1527034 -84461900 - MER41B LTR ERV1 -51 584 512 2172 104 3 25 chr18 1527034 1527351 -84461583 + AluSg SINE Alu 1 310 0 2208 164 31 64 chr18 1527351 1527766 -84461168 - MER41B LTR ERV1 -123 512 114 22 0 0 0 chr18 1528542 1528564 -84460370 + AT_rich Low_complexity Low_complexity 1 22 0 290 294 24 0 chr18 1528883 1528968 -84459966 - MIR SINE MIR -79 183 97 2050 112 4 0 chr18 1529153 1529430 -84459504 - AluSc SINE Alu -19 290 13 218 284 12 0 chr18 1529519 1529600 -84459334 + T-rich Low_complexity Low_complexity 3 84 0 2161 116 0 0 chr18 1529618 1529912 -84459022 - AluSx SINE Alu -18 294 1 27 29 0 0 chr18 1529999 1530033 -84458901 + AT_rich Low_complexity Low_complexity 1 34 0 584 186 65 0 chr18 1530188 1530337 -84458597 - L1M4 LINE L1 -2362 3784 3621 939 171 12 6 chr18 1530356 1530520 -84458414 + MLT1A1 LTR MaLR 25 189 -176 375 339 101 74 chr18 1530883 1531399 -84457535 + L1M2 LINE L1 11 540 -6309 724 290 79 46 chr18 1531970 1532590 -84456344 + L1PA16 LINE L1 395 1146 -5057 2073 90 17 0 chr18 1532590 1532889 -84456045 + AluSc SINE Alu 1 304 -5 724 290 79 46 chr18 1532889 1532956 -84455978 + L1PA16 LINE L1 1146 1209 -4994 * 11585 213 33 20 chr18 1532952 1533778 -84455156 + L1PA16 LINE L1 2256 3070 -3153 1840 167 0 10 chr18 1533778 1534077 -84454857 + AluJb SINE Alu 1 296 -16 11585 213 33 20 chr18 1534077 1537041 -84451893 + L1PA16 LINE L1 3070 6099 -124 23 33 0 0 chr18 1537056 1537086 -84451848 + AT_rich Low_complexity Low_complexity 1 30 0 31 44 0 0 chr18 1537144 1537189 -84451745 + AT_rich Low_complexity Low_complexity 1 45 0 24 53 0 0 chr18 1537327 1537365 -84451569 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr18 1537458 1537479 -84451455 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr18 1538191 1538223 -84450711 + AT_rich Low_complexity Low_complexity 1 32 0 319 261 68 31 chr18 1538281 1538442 -84450492 - L1ME3A LINE L1 -32 6138 5972 2061 269 83 59 chr18 1538467 1539765 -84449169 - L1ME3A LINE L1 -289 5881 4616 2013 134 0 0 chr18 1539765 1540064 -84448870 + AluSg1 SINE Alu 1 299 -10 2061 269 83 59 chr18 1540064 1540633 -84448301 - L1ME3A LINE L1 -1554 4616 4062 2151 128 112 20 chr18 1540633 1541025 -84447909 - MSTA LTR MaLR 0 428 1 8741 147 10 54 chr18 1541025 1542676 -84446258 - MSTA-int LTR MaLR 0 1580 3 1806 138 176 27 chr18 1542678 1543048 -84445886 - MSTA LTR MaLR 0 428 4 2061 269 83 59 chr18 1543048 1543161 -84445773 - L1ME3A LINE L1 -2108 4062 3846 477 314 57 25 chr18 1543187 1543470 -84445464 - L1ME3A LINE L1 -2515 3631 3340 29 60 0 0 chr18 1544938 1544988 -84443946 + AT_rich Low_complexity Low_complexity 1 50 0 259 313 0 0 chr18 1545741 1545824 -84443110 + (TA)n Simple_repeat Simple_repeat 1 83 0 957 287 125 55 chr18 1546049 1546537 -84442397 - MLT1G1 LTR MaLR -1 594 73 671 320 27 8 chr18 1546640 1546896 -84442038 - MIR SINE MIR 0 262 2 2348 189 25 36 chr18 1547335 1547810 -84441124 + MER70A LTR ERVL 3 472 0 752 186 26 26 chr18 1548734 1548890 -84440044 + AluJo SINE Alu 125 280 -32 1777 101 105 4 chr18 1548890 1549157 -84439777 - AluSx SINE Alu -16 296 3 212 133 0 0 chr18 1549161 1549191 -84439743 + (GA)n Simple_repeat Simple_repeat 1 30 0 491 81 0 14 chr18 1549192 1549266 -84439668 + (GGGGA)n Simple_repeat Simple_repeat 3 75 0 816 155 11 55 chr18 1550198 1550379 -84438555 + AluJb SINE Alu 136 308 -4 2561 37 0 0 chr18 1550630 1550930 -84438004 + AluY SINE Alu 1 300 -11 1844 188 28 15 chr18 1553403 1553803 -84435131 + L1M3e LINE L1 1 405 -6625 2701 138 6 43 chr18 1553804 1553839 -84435095 + L1M2 LINE L1 5330 5365 -926 1605 68 5 0 chr18 1553839 1554046 -84434888 + L1PA8 LINE L1 5965 6172 0 2701 138 6 43 chr18 1554046 1554517 -84434417 + L1M2 LINE L1 5365 5817 -474 2585 55 0 0 chr18 1554635 1554942 -84433992 + AluY SINE Alu 1 307 -4 274 343 28 51 chr18 1555041 1555219 -84433715 - MIR3 SINE MIR -7 201 28 988 230 59 24 chr18 1555554 1556153 -84432781 + L1ME LINE L1 4983 5699 -465 2356 65 0 32 chr18 1556249 1556427 -84432507 - AluY SINE Alu -11 300 135 7510 31 0 0 chr18 1556427 1558056 -84430878 - L1PA3 LINE L1 0 6155 4521 2356 65 0 32 chr18 1558056 1558187 -84430747 - AluY SINE Alu -176 135 1 235 150 75 25 chr18 1558349 1558429 -84430505 + (TATAA)n Simple_repeat Simple_repeat 3 86 0 289 309 217 17 chr18 1560280 1560455 -84428479 + MIR SINE MIR 49 258 -4 4994 142 33 1 chr18 1560666 1561542 -84427392 - L1PA16 LINE L1 -9 6157 5254 2140 183 178 5 chr18 1561550 1562101 -84426833 - L1PA16 LINE L1 -1475 4671 4026 1000 290 156 14 chr18 1562251 1562693 -84426241 + L2 LINE L2 2380 2884 -430 621 282 89 66 chr18 1562731 1563079 -84425855 + L2 LINE L2 2958 3313 0 500 247 7 0 chr18 1563136 1563290 -84425644 + (CA)n Simple_repeat Simple_repeat 2 156 0 258 364 8 16 chr18 1563341 1563462 -84425472 + MER5A DNA MER1_type 1 120 -69 565 271 0 0 chr18 1564471 1564593 -84424341 - FLAM_A SINE Alu -11 122 1 499 299 154 5 chr18 1566818 1567032 -84421902 - MIR SINE MIR -14 248 3 590 259 106 62 chr18 1567278 1567552 -84421382 + MLT1I LTR MaLR 121 406 -3 195 286 16 32 chr18 1567868 1567931 -84421003 - L2 LINE L2 0 3272 3211 539 251 64 39 chr18 1568069 1568092 -84420842 + MLT2C1 LTR ERVL 20 227 -170 544 217 33 83 chr18 1568092 1568272 -84420662 + MLT1E3 LTR MaLR 64 234 -390 392 279 90 45 chr18 1568316 1568517 -84420417 - L1ME3 LINE L1 -272 5890 5681 315 313 72 21 chr18 1568670 1568961 -84419973 - L1ME3 LINE L1 -558 5563 5258 40928 32 20 4 chr18 1569629 1575680 -84413254 + L1PA2 LINE L1 1 6151 -4 870 62 0 0 chr18 1576047 1576160 -84412774 + (TA)n Simple_repeat Simple_repeat 1 113 0 306 87 0 0 chr18 1576328 1576374 -84412560 + (TG)n Simple_repeat Simple_repeat 1 46 0 2593 139 31 5 chr18 1577603 1578020 -84410914 + MSTA LTR MaLR 1 428 0 6338 210 92 103 chr18 1579880 1582650 -84406284 + L1M2 LINE L1 172 2908 -3940 2316 76 13 0 chr18 1582650 1582953 -84405981 + AluY SINE Alu 1 307 -4 6338 210 92 103 chr18 1582953 1583186 -84405748 + L1M2 LINE L1 2908 3142 -3706 1864 170 55 39 chr18 1583209 1583383 -84405551 - MLT2A2 LTR ERVL -5 549 379 2290 96 0 3 chr18 1583383 1583686 -84405248 + AluSg SINE Alu 1 302 -8 1864 170 55 39 chr18 1583686 1584059 -84404875 - MLT2A2 LTR ERVL -175 379 1 454 275 122 37 chr18 1586680 1586869 -84402065 + MLT1I LTR MaLR 186 390 -19 328 48 95 0 chr18 1587082 1587166 -84401768 + (TA)n Simple_repeat Simple_repeat 2 93 0 286 341 8 8 chr18 1587693 1587825 -84401109 - MLT1I LTR MaLR 0 409 278 216 0 0 0 chr18 1588189 1588213 -84400721 + (A)n Simple_repeat Simple_repeat 1 24 0 269 213 16 0 chr18 1588431 1588492 -84400442 + MER94 DNA DNA 5 66 -68 223 428 14 0 chr18 1588519 1588664 -84400270 - MIR SINE MIR -110 152 6 33 85 0 0 chr18 1588945 1589027 -84399907 + AT_rich Low_complexity Low_complexity 1 82 0 198 0 0 0 chr18 1589460 1589482 -84399452 + (TGAA)n Simple_repeat Simple_repeat 2 23 0 21 0 0 0 chr18 1589829 1589850 -84399084 + AT_rich Low_complexity Low_complexity 1 21 0 1805 183 0 0 chr18 1591181 1591454 -84397480 - AluSx SINE Alu -39 273 1 21 0 0 0 chr18 1592159 1592180 -84396754 + AT_rich Low_complexity Low_complexity 1 21 0 2862 191 30 8 chr18 1592536 1593143 -84395791 + ERVL-C2 LTR ERVL 5138 5757 -7 1945 181 99 14 chr18 1593144 1593570 -84395364 + MLT2C2 LTR ERVL 3 464 0 422 392 80 32 chr18 1593917 1594415 -84394519 + L1M2 LINE L1 10 531 -6318 229 302 12 23 chr18 1594583 1594669 -84394265 + L1PA16 LINE L1 121 205 -5999 7655 219 64 51 chr18 1595242 1596884 -84392050 + L1PA16 LINE L1 711 2330 -3893 2111 129 0 13 chr18 1596884 1597194 -84391740 + AluSx SINE Alu 1 306 -6 7655 219 64 51 chr18 1597194 1597928 -84391006 + L1PA16 LINE L1 2330 3053 -3170 823 147 0 0 chr18 1597928 1598044 -84390890 + AluJb SINE Alu 3 118 -194 7655 219 64 51 chr18 1598044 1600920 -84388014 + L1PA16 LINE L1 3053 6223 0 695 101 0 0 chr18 1601572 1601671 -84387263 - L1PA3 LINE L1 -173 5982 5884 248 70 0 0 chr18 1601671 1601714 -84387220 + L1PA2 LINE L1 6113 6155 0 26 0 0 0 chr18 1601714 1601740 -84387194 + AT_rich Low_complexity Low_complexity 1 26 0 1337 190 33 47 chr18 1602232 1602506 -84386428 + AluJo SINE Alu 29 298 -14 1640 214 131 14 chr18 1603117 1603630 -84385304 - MLT1E2 LTR MaLR 0 626 54 225 167 71 0 chr18 1603830 1603872 -84385062 - MLT1E2 LTR MaLR -460 45 1 249 322 207 8 chr18 1604131 1604252 -84384682 + MER91A DNA MER1_type 5 149 -47 25 31 0 0 chr18 1605621 1605653 -84383281 + AT_rich Low_complexity Low_complexity 1 32 0 180 281 53 0 chr18 1605795 1605852 -84383082 - MIR SINE MIR -10 252 193 34 42 0 0 chr18 1605852 1605900 -84383034 + AT_rich Low_complexity Low_complexity 1 48 0 647 237 52 36 chr18 1605907 1606101 -84382833 - MIR SINE MIR -61 201 5 202 222 0 0 chr18 1606625 1606661 -84382273 + (CA)n Simple_repeat Simple_repeat 1 36 0 270 0 0 0 chr18 1607788 1607818 -84381116 + (TG)n Simple_repeat Simple_repeat 2 31 0 219 36 0 0 chr18 1607874 1607902 -84381032 + (TG)n Simple_repeat Simple_repeat 2 29 0 303 93 0 0 chr18 1607952 1607995 -84380939 + (TG)n Simple_repeat Simple_repeat 1 43 0 2484 161 3 5 chr18 1610582 1611061 -84377873 - L1MB2 LINE L1 -304 5867 5389 1958 140 38 30 chr18 1611243 1611615 -84377319 + THE1C LTR MaLR 1 375 0 22 56 0 0 chr18 1612461 1612497 -84376437 + AT_rich Low_complexity Low_complexity 1 36 0 367 316 88 10 chr18 1612714 1612907 -84376027 + MIR SINE MIR 47 254 -8 399 224 18 2 chr18 1613250 1613350 -84375584 - MER21B LTR ERV1 -26 579 462 23 0 0 0 chr18 1613359 1613382 -84375552 + AT_rich Low_complexity Low_complexity 1 23 0 28 0 0 26 chr18 1613431 1613457 -84375477 + AT_rich Low_complexity Low_complexity 1 27 -11 2968 12 0 0 chr18 1613457 1613795 -84375139 - L1PA3 LINE L1 -3 6152 5815 28 0 0 26 chr18 1613795 1613807 -84375127 + AT_rich Low_complexity Low_complexity 27 38 0 1058 76 0 51 chr18 1614022 1614180 -84374754 + AluSp SINE Alu 1 150 -163 619 104 198 0 chr18 1614325 1614431 -84374503 + AluSp/q SINE Alu 168 294 -19 28 0 0 0 chr18 1614456 1614484 -84374450 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr18 1615026 1615055 -84373879 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr18 1615340 1615362 -84373572 + AT_rich Low_complexity Low_complexity 1 22 0 4315 145 7 17 chr18 1615575 1616293 -84372641 + MER50 LTR ERV1 1 711 -23 439 238 58 2 chr18 1617052 1617201 -84371733 + MER5A DNA MER1_type 2 164 -14 21 0 0 0 chr18 1618075 1618096 -84370838 + AT_rich Low_complexity Low_complexity 1 21 0 731 198 90 34 chr18 1618457 1618634 -84370300 + MLT1B LTR MaLR 1 187 -187 230 229 21 0 chr18 1618635 1618683 -84370251 + CT-rich Low_complexity Low_complexity 1 49 0 778 223 14 51 chr18 1618692 1618907 -84370027 + MLT1B LTR MaLR 184 390 0 272 295 0 108 chr18 1619675 1619804 -84369130 + L2 LINE L2 3199 3313 0 962 251 132 35 chr18 1619808 1620208 -84368726 + MER34 LTR ERV1 4 639 -68 2073 152 64 30 chr18 1620284 1620819 -84368115 - MLT2A2 LTR ERVL 0 554 2 426 322 61 17 chr18 1620993 1621173 -84367761 + L2 LINE L2 3121 3308 -5 591 210 0 36 chr18 1621266 1621367 -84367567 + AluJo SINE Alu 1 97 -215 2766 79 3 0 chr18 1621367 1621721 -84367213 + THE1A LTR MaLR 1 355 0 591 210 0 36 chr18 1621721 1621757 -84367177 + AluJo SINE Alu 97 133 -179 859 179 0 52 chr18 1621764 1621937 -84366997 + AluJo SINE Alu 138 301 -1 1950 186 3 35 chr18 1622418 1622513 -84366421 - MLT1A1 LTR MaLR 0 365 269 4750 95 19 10 chr18 1622513 1623198 -84365736 - LTR8 LTR ERV1 0 691 1 1950 186 3 35 chr18 1623198 1623479 -84365455 - MLT1A1 LTR MaLR -96 269 1 188 305 61 61 chr18 1623915 1623997 -84364937 + L2 LINE L2 3148 3229 -43 21 0 0 0 chr18 1625063 1625084 -84363850 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr18 1625778 1625799 -84363135 + AT_rich Low_complexity Low_complexity 1 21 0 185 238 12 62 chr18 1625966 1626046 -84362888 - L2 LINE L2 -1601 1713 1638 1845 137 3 21 chr18 1626264 1626728 -84362206 + AluJb SINE Alu 5 463 0 259 200 0 31 chr18 1628238 1628303 -84360631 - MER103 DNA DNA -50 116 54 417 144 56 0 chr18 1628314 1628404 -84360530 + L1M4 LINE L1 3660 3754 -2392 2873 160 104 13 chr18 1628407 1628880 -84360054 + L1MA9 LINE L1 5657 6196 -116 189 0 0 0 chr18 1628880 1628901 -84360033 + (CA)n Simple_repeat Simple_repeat 2 22 0 2873 160 104 13 chr18 1628901 1629022 -84359912 + L1MA9 LINE L1 6196 6305 -7 491 222 0 0 chr18 1629032 1629131 -84359803 + L1M4 LINE L1 3759 3857 -2289 1136 190 11 68 chr18 1629138 1629417 -84359517 + L1MB8 LINE L1 5916 6178 0 246 323 0 68 chr18 1629487 1629620 -84359314 + L2 LINE L2 2932 3055 -217 239 203 17 0 chr18 1629680 1629739 -84359195 + (TGGA)n Simple_repeat Simple_repeat 2 61 0 548 247 6 63 chr18 1629739 1629913 -84359021 + MER112 DNA MER1_type 90 253 -7 2374 38 24 0 chr18 1630129 1630418 -84358516 - AluY SINE Alu -15 296 1 342 45 0 0 chr18 1631091 1631135 -84357799 + (TG)n Simple_repeat Simple_repeat 1 44 0 204 40 0 0 chr18 1631134 1631159 -84357775 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 197 200 25 0 chr18 1632001 1632041 -84356893 + L2 LINE L2 3262 3302 -11 1849 187 88 30 chr18 1633009 1633630 -84355304 - L1MC/D LINE L1 -581 5661 5009 * 19938 172 20 8 chr18 1633612 1641232 -84347702 - L1MA2 LINE L1 0 7723 11 4364 261 100 16 chr18 1641231 1641484 -84347450 + L1ME2 LINE L1 2208 2438 -3708 * 1826 103 0 33 chr18 1641484 1641756 -84347178 + AluSg SINE Alu 48 310 0 4364 261 100 16 chr18 1641756 1643479 -84345455 + L1ME2 LINE L1 2438 4351 -1795 990 281 81 21 chr18 1643484 1643918 -84345016 - MLT1C LTR MaLR 0 467 8 2596 244 60 29 chr18 1643953 1645630 -84343304 + L1ME2 LINE L1 4397 6332 -2 3035 228 81 26 chr18 1646082 1646873 -84342061 + MER21B LTR ERV1 19 852 -11 195 0 27 54 chr18 1647183 1647220 -84341714 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 22952 29 2 0 chr18 1647232 1652479 -84336455 - L1PA3 LINE L1 -3 6152 900 5790 57 3 12 chr18 1652506 1653275 -84335659 - L1PA3 LINE L1 -5384 762 1 382 329 70 19 chr18 1653943 1654362 -84334572 + L1ME LINE L1 5258 5697 -473 227 284 93 36 chr18 1654387 1654581 -84334353 + L1ME LINE L1 5681 5885 -277 599 211 33 83 chr18 1654632 1654812 -84334122 - MLT1E3 LTR MaLR -390 234 64 595 251 64 39 chr18 1654812 1654835 -84334099 - MLT2C1 LTR ERVL -170 227 20 195 286 16 32 chr18 1654973 1655036 -84333898 + L2 LINE L2 3211 3272 0 673 259 106 62 chr18 1655352 1655626 -84333308 - MLT1I LTR MaLR -3 406 121 503 299 154 5 chr18 1655872 1656086 -84332848 + MIR SINE MIR 3 248 -14 457 297 55 85 chr18 1656314 1656806 -84332128 + L1ME LINE L1 898 1374 -5573 2253 101 0 0 chr18 1656949 1657263 -84331671 + AluSx SINE Alu 1 314 0 289 302 92 1 chr18 1657284 1657398 -84331536 + L1ME LINE L1 1373 1475 -5472 360 0 0 0 chr18 1657398 1657438 -84331496 + (CA)n Simple_repeat Simple_repeat 2 41 0 289 302 92 1 chr18 1657438 1657528 -84331406 + L1ME LINE L1 1475 1650 -5297 916 144 53 5 chr18 1657592 1657780 -84331154 - L1MB3 LINE L1 -2 6181 5985 687 302 104 25 chr18 1658235 1658632 -84330302 + ERVL LTR ERVL 1933 2410 -2993 2186 113 0 0 chr18 1659271 1659564 -84329370 + AluSx SINE Alu 1 293 -19 313 381 32 11 chr18 1659688 1659877 -84329057 - L2 LINE L2 -361 2953 2761 * 498 286 22 60 chr18 1659872 1660054 -84328880 + MER5A DNA MER1_type 15 189 0 939 315 64 47 chr18 1660178 1660723 -84328211 - L2 LINE L2 0 3313 2761 195 351 37 42 chr18 1660841 1661032 -84327902 - L2 LINE L2 -816 2498 2309 771 214 69 0 chr18 1661090 1661249 -84327685 - FRAM SINE Alu -9 167 1 234 268 12 37 chr18 1661249 1661331 -84327603 - MLT1J LTR MaLR -45 466 387 1754 236 70 25 chr18 1661370 1661854 -84327080 - MER74B LTR ERVL -58 564 59 701 293 70 0 chr18 1661850 1662079 -84326855 - MLT1J LTR MaLR -109 402 158 * 2048 134 3 0 chr18 1663820 1664112 -84324822 - AluSx SINE Alu -19 293 1 193 186 70 0 chr18 1664293 1664336 -84324598 - L2 LINE L2 -2927 387 342 25 0 0 0 chr18 1664484 1664509 -84324425 + AT_rich Low_complexity Low_complexity 1 25 0 1291 98 0 0 chr18 1664509 1664672 -84324262 - AluSq SINE Alu -150 163 1 3084 146 77 13 chr18 1664694 1665291 -84323643 + Tigger3(Golem) DNA MER2_type 2394 3028 -1 1295 215 98 21 chr18 1665292 1665776 -84323158 + L1M4 LINE L1 4955 5489 -695 581 283 47 67 chr18 1666181 1666481 -84322453 + L2 LINE L2 2875 3168 -145 21 0 0 0 chr18 1667154 1667175 -84321759 + AT_rich Low_complexity Low_complexity 1 21 0 386 278 111 8 chr18 1667515 1667641 -84321293 + L2 LINE L2 3172 3310 -3 246 306 0 0 chr18 1667724 1667786 -84321148 + MIR3 SINE MIR 111 172 -36 1546 230 46 38 chr18 1668060 1668608 -84320326 - MER69 DNA AcHobo 0 2526 1975 580 240 11 0 chr18 1668684 1668859 -84320075 - MER69 DNA AcHobo -709 1817 1641 335 336 9 9 chr18 1669386 1669502 -84319432 - MER45 DNA AcHobo -1465 116 1 315 280 85 0 chr18 1669574 1669692 -84319242 - MER69 DNA AcHobo -2190 336 209 1032 37 0 8 chr18 1669792 1669926 -84319008 - L1PA4 LINE L1 -103 6052 5920 * 2084 35 4 0 chr18 1669924 1670270 -84318664 + L1P2 LINE L1 5172 5518 -636 262 293 19 0 chr18 1670335 1670441 -84318493 - L1ME LINE L1 -280 5884 5777 992 232 30 13 chr18 1670546 1670779 -84318155 + Charlie1 DNA MER1_type 1 237 -2524 542 221 52 0 chr18 1670765 1670901 -84318033 + Charlie1 DNA MER1_type 2619 2761 0 * 25 31 0 0 chr18 1671367 1671399 -84317535 + AT_rich Low_complexity Low_complexity 1 32 0 945 157 52 0 chr18 1671399 1671552 -84317382 - FRAM SINE Alu -18 158 1 21 71 0 0 chr18 1671810 1671852 -84317082 + AT_rich Low_complexity Low_complexity 1 42 0 410 306 55 51 chr18 1672007 1672282 -84316652 - L1M4 LINE L1 -3653 2493 2218 534 199 7 34 chr18 1672789 1672935 -84315999 - Charlie1 DNA MER1_type 0 2761 2620 421 209 35 0 chr18 1672920 1673006 -84315928 - Charlie1 DNA MER1_type -2524 237 149 * 2334 104 0 0 chr18 1673858 1674165 -84314769 - AluSc SINE Alu -2 307 1 253 352 70 14 chr18 1674709 1674851 -84314083 - MIR SINE MIR -106 156 7 431 228 22 59 chr18 1676421 1676557 -84312377 - L2 LINE L2 -19 3294 3164 494 221 52 15 chr18 1676819 1676955 -84311979 - L2 LINE L2 -417 2897 2757 338 256 22 0 chr18 1676989 1677079 -84311855 - L2 LINE L2 -992 2322 2231 199 222 0 0 chr18 1677271 1677307 -84311627 - MIR SINE MIR -9 253 218 * 422 329 6 63 chr18 1677275 1677433 -84311501 - L2 LINE L2 -19 3253 3105 406 317 59 0 chr18 1677418 1677604 -84311330 + L2 LINE L2 1968 2164 -1150 * 994 317 80 20 chr18 1677609 1678285 -84310649 + L2 LINE L2 2583 3310 -3 725 314 91 29 chr18 1678546 1678963 -84309971 - L2 LINE L2 -353 2961 2519 2196 108 0 7 chr18 1679321 1679618 -84309316 - AluSq SINE Alu -18 295 1 1839 118 0 0 chr18 1680140 1680386 -84308548 - AluSq SINE Alu -17 296 51 1855 267 25 22 chr18 1680387 1681028 -84307906 - L1ME2 LINE L1 -11 6153 5511 744 234 5 0 chr18 1681029 1681213 -84307721 + L1M4 LINE L1 4740 4924 -1222 628 181 29 0 chr18 1681225 1681330 -84307604 + Tigger3(Golem) DNA MER2_type 1 108 -2921 3614 138 77 20 chr18 1681330 1681414 -84307520 + Tigger3(Golem) DNA MER2_type 2285 2363 -666 2274 109 3 0 chr18 1681414 1681716 -84307218 - AluSg SINE Alu -7 303 1 3614 138 77 20 chr18 1681716 1682335 -84306599 + Tigger3(Golem) DNA MER2_type 2363 3028 -1 1289 215 97 23 chr18 1682336 1682821 -84306113 + L1M4 LINE L1 4955 5489 -695 581 283 47 67 chr18 1683226 1683526 -84305408 + L2 LINE L2 2875 3168 -145 21 0 0 0 chr18 1684199 1684220 -84304714 + AT_rich Low_complexity Low_complexity 1 21 0 386 278 111 8 chr18 1684560 1684686 -84304248 + L2 LINE L2 3172 3310 -3 259 290 0 0 chr18 1684769 1684831 -84304103 + MIR3 SINE MIR 111 172 -36 1546 230 46 38 chr18 1685107 1685655 -84303279 - MER69 DNA AcHobo 0 2526 1975 605 234 11 0 chr18 1685731 1685906 -84303028 - MER69 DNA AcHobo -709 1817 1641 349 328 9 9 chr18 1686433 1686549 -84302385 - MER45 DNA AcHobo -1465 116 1 836 306 56 0 chr18 1686622 1686906 -84302028 - MER69 DNA AcHobo -2190 336 37 1783 171 7 0 chr18 1686919 1687221 -84301713 + AluJo SINE Alu 1 304 0 196 410 60 0 chr18 1689566 1689649 -84299285 + L2 LINE L2 3143 3230 -42 356 151 0 27 chr18 1690615 1690688 -84298246 + L1M2 LINE L1 5723 5793 -507 466 152 16 66 chr18 1690691 1690829 -84298105 + L1MA7 LINE L1 5728 5858 -331 583 257 40 7 chr18 1690917 1691065 -84297869 - MIR SINE MIR -10 252 100 456 198 0 0 chr18 1691295 1691376 -84297558 - Charlie1 DNA MER1_type -6 2755 2675 466 40 14 27 chr18 1691376 1691450 -84297484 + (TCTA)n Simple_repeat Simple_repeat 4 76 0 879 210 27 0 chr18 1691465 1691651 -84297283 - Charlie1 DNA MER1_type -2521 240 50 361 184 58 0 chr18 1692281 1692368 -84296566 - L1PA16 LINE L1 -325 5841 5750 344 83 0 17 chr18 1692352 1692412 -84296522 + L1MA4A LINE L1 6221 6279 -24 * 966 217 105 58 chr18 1692709 1693004 -84295930 + MLT1A1 LTR MaLR 56 364 -1 2328 103 0 0 chr18 1693086 1693397 -84295537 + AluY SINE Alu 1 311 0 288 0 0 0 chr18 1694433 1694465 -84294469 + (TA)n Simple_repeat Simple_repeat 2 33 0 2325 105 3 0 chr18 1694465 1694770 -84294164 - AluSx SINE Alu -6 306 1 2326 122 30 22 chr18 1695620 1695981 -84292953 - THE1B LTR MaLR 0 364 1 1358 296 98 79 chr18 1696015 1697219 -84291715 + L2 LINE L2 1701 2921 -351 221 258 75 75 chr18 1697231 1697324 -84291610 + L2 LINE L2 2873 2965 -307 312 294 48 62 chr18 1697376 1697522 -84291412 + L2 LINE L2 3162 3305 -8 195 129 0 0 chr18 1698706 1698737 -84290197 + (A)n Simple_repeat Simple_repeat 1 31 0 236 294 196 20 chr18 1699011 1699113 -84289821 - L2 LINE L2 -4 3268 3149 2305 95 3 0 chr18 1699438 1699743 -84289191 + AluSp SINE Alu 1 306 -7 456 355 37 12 chr18 1702069 1702311 -84286623 - L3 LINE CR1 -20 1557 1310 213 65 0 0 chr18 1702806 1702837 -84286097 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 214 370 91 53 chr18 1702975 1703424 -84285510 - L2 LINE L2 -885 2429 1964 1701 278 76 16 chr18 1704187 1704939 -84283995 - L1ME3A LINE L1 -100 6139 5343 291 344 14 5 chr18 1704960 1705172 -84283762 - L1ME3A LINE L1 -929 5286 5073 240 143 0 0 chr18 1705189 1705231 -84283703 + (TG)n Simple_repeat Simple_repeat 1 42 0 708 259 46 24 chr18 1705233 1705603 -84283331 - L1ME3A LINE L1 -1166 5049 4618 391 248 30 20 chr18 1705674 1705775 -84283159 + MLT1H LTR MaLR 190 291 -258 309 271 24 0 chr18 1705992 1706077 -84282857 + MLT1H LTR MaLR 463 549 0 1178 286 151 30 chr18 1706082 1707020 -84281914 - L1ME3A LINE L1 -1596 4619 3463 2451 38 10 0 chr18 1707020 1707313 -84281621 - AluY SINE Alu -15 296 1 1178 286 151 30 chr18 1707313 1707736 -84281198 - L1ME3A LINE L1 -2752 3463 3093 2541 53 0 0 chr18 1707773 1708072 -84280862 - AluY SINE Alu -12 299 1 457 281 126 49 chr18 1708082 1708612 -84280322 - L1ME3A LINE L1 -3316 2899 2329 476 256 50 0 chr18 1708676 1708797 -84280137 - L1ME3A LINE L1 -6226 170 44 951 294 51 29 chr18 1708806 1709394 -84279540 - L1MEc LINE L1 -4533 1863 1263 2301 257 16 3 chr18 1709395 1710029 -84278905 - L1MEc LINE L1 -5263 1133 492 521 193 18 0 chr18 1710057 1710166 -84278768 - L1MEc LINE L1 -6247 149 39 213 153 28 69 chr18 1711784 1711856 -84277078 + CT-rich Low_complexity Low_complexity 3 71 0 22 35 0 0 chr18 1711865 1711894 -84277040 + AT_rich Low_complexity Low_complexity 1 29 0 772 349 34 29 chr18 1712019 1712429 -84276505 + LTR16A LTR ERVL 33 444 -6 425 311 57 0 chr18 1712435 1712557 -84276377 + HERV16 LTR ERVL 1 129 -4867 321 247 27 0 chr18 1712761 1712834 -84276100 + HERV16 LTR ERVL 362 436 -4560 329 252 37 37 chr18 1712907 1713014 -84275920 + HERV16 LTR ERVL 2671 2777 -2219 313 286 36 0 chr18 1713138 1713222 -84275712 + HERV16 LTR ERVL 2998 3084 -1912 22 0 0 0 chr18 1713671 1713693 -84275241 + AT_rich Low_complexity Low_complexity 1 22 0 265 246 41 54 chr18 1713743 1713943 -84274991 - L1ME LINE L1 -297 5873 5683 493 132 35 35 chr18 1714025 1714139 -84274795 - L1MA4 LINE L1 -1 6299 6186 330 235 82 31 chr18 1714216 1714314 -84274620 - HAL1 LINE L1 -905 1602 1500 951 297 79 74 chr18 1714406 1715686 -84273248 - L1MEd LINE L1 -4833 1255 18 375 210 98 13 chr18 1715813 1715970 -84272964 - L1ME LINE L1 -753 5425 5290 481 246 0 0 chr18 1716017 1716155 -84272779 - L1MA10 LINE L1 -14 6320 6183 1323 213 91 12 chr18 1716823 1717143 -84271791 - MER2 DNA MER2_type 0 345 1 315 292 23 18 chr18 1717792 1717963 -84270971 + A-rich Low_complexity Low_complexity 4 175 0 2702 107 89 5 chr18 1719502 1719949 -84268985 + MER31A LTR ERV1 1 485 0 568 285 38 72 chr18 1720494 1720757 -84268177 + MIR SINE MIR 1 254 -8 21 0 0 0 chr18 1721105 1721126 -84267808 + AT_rich Low_complexity Low_complexity 1 21 0 283 252 84 76 chr18 1721423 1721542 -84267392 + L2 LINE L2 3152 3271 -1 267 284 15 0 chr18 1721735 1721802 -84267132 - L2 LINE L2 -17 3296 3229 907 256 66 15 chr18 1721945 1722219 -84266715 + LTR33 LTR ERVL 1 288 -233 317 239 23 11 chr18 1722259 1722347 -84266587 + LTR33 LTR ERVL 424 512 -9 241 319 42 0 chr18 1722374 1722446 -84266488 + MIR3 SINE MIR 134 208 0 271 242 0 16 chr18 1722502 1722564 -84266370 - LTR33A LTR ERVL -19 504 444 373 298 76 38 chr18 1723002 1723340 -84265594 - HAL1b LINE L1 -2 2505 766 21 36 0 0 chr18 1723462 1723490 -84265444 + AT_rich Low_complexity Low_complexity 1 28 0 2528 32 0 0 chr18 1723623 1723944 -84264990 - AluY SINE Alu 0 321 1 238 352 31 10 chr18 1724711 1724904 -84264030 - HAL1 LINE L1 -710 1797 1601 * 19819 185 22 12 chr18 1724900 1728829 -84260105 - L1PA13 LINE L1 -2 6812 2766 1433 80 5 10 chr18 1728829 1729030 -84259904 - L1PA5 LINE L1 -3 6151 5952 19819 185 22 12 chr18 1729030 1731824 -84257110 - L1PA13 LINE L1 -4048 2766 1 21 0 0 0 chr18 1731837 1731858 -84257076 + AT_rich Low_complexity Low_complexity 1 21 0 408 262 111 12 chr18 1731865 1732037 -84256897 - HAL1 LINE L1 -916 1591 1403 199 331 125 64 chr18 1732057 1732183 -84256751 - L2 LINE L2 -2 3311 3194 2316 93 0 3 chr18 1732183 1732483 -84256451 - AluSp SINE Alu -14 299 1 199 331 125 64 chr18 1732483 1732652 -84256282 - L2 LINE L2 -119 3194 2998 277 274 281 18 chr18 1732674 1732838 -84256096 - L2 LINE L2 -420 2894 2688 1462 264 107 20 chr18 1732839 1733336 -84255598 + L2 LINE L2 1155 1694 -1620 919 174 7 0 chr18 1733336 1733491 -84255443 - L1PB4 LINE L1 -4 6152 5997 1112 201 30 0 chr18 1733491 1733754 -84255180 + L1 LINE L1 5027 5297 -849 2820 280 78 43 chr18 1733773 1735044 -84253890 + L2 LINE L2 1705 3023 -290 1420 197 132 6 chr18 1735052 1735377 -84253557 + MLT2D LTR ERVL 1 366 -48 209 143 0 41 chr18 1735381 1735430 -84253504 + (CATA)n Simple_repeat Simple_repeat 1 47 0 210 167 0 0 chr18 1735587 1735623 -84253311 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 492 261 25 19 chr18 1735623 1735780 -84253154 + L2 LINE L2 3154 3311 -2 346 346 58 43 chr18 1735786 1736113 -84252821 + L1ME3A LINE L1 5839 6170 0 351 303 30 68 chr18 1736213 1736345 -84252589 - MIR3 SINE MIR -46 162 36 312 149 0 45 chr18 1736585 1736652 -84252282 + LTR19C LTR ERV1 629 692 -87 189 0 0 0 chr18 1736652 1736673 -84252261 + (A)n Simple_repeat Simple_repeat 1 21 0 1321 86 0 0 chr18 1736684 1736847 -84252087 + AluSq SINE Alu 1 163 -150 25 0 0 0 chr18 1736847 1736872 -84252062 + AT_rich Low_complexity Low_complexity 1 25 0 193 186 70 0 chr18 1737020 1737063 -84251871 + L2 LINE L2 342 387 -2927 2077 130 3 0 chr18 1737244 1737536 -84251398 + AluSx SINE Alu 1 293 -19 701 293 70 0 chr18 1739277 1739506 -84249428 + MLT1J LTR MaLR 158 402 -109 * 1754 236 70 25 chr18 1739502 1739986 -84248948 + MER74B LTR ERVL 59 564 -58 234 268 12 37 chr18 1740025 1740107 -84248827 + MLT1J LTR MaLR 387 466 -45 771 214 69 0 chr18 1740107 1740266 -84248668 + FRAM SINE Alu 1 167 -9 195 351 37 42 chr18 1740324 1740515 -84248419 + L2 LINE L2 2309 2498 -816 939 315 64 47 chr18 1740633 1741178 -84247756 + L2 LINE L2 2761 3313 0 498 286 22 60 chr18 1741302 1741484 -84247450 - MER5A DNA MER1_type 0 189 15 313 381 32 11 chr18 1741479 1741668 -84247266 + L2 LINE L2 2761 2953 -361 * 2186 113 0 0 chr18 1741792 1742085 -84246849 - AluSx SINE Alu -19 293 1 687 302 104 25 chr18 1742724 1743121 -84245813 - ERVL LTR ERVL -2993 2003 1933 916 144 53 5 chr18 1743576 1743764 -84245170 + L1MB3 LINE L1 5985 6181 -2 266 323 81 5 chr18 1743847 1743918 -84245016 - L1ME LINE L1 -5297 773 709 396 0 0 0 chr18 1743918 1743962 -84244972 + (TG)n Simple_repeat Simple_repeat 2 45 0 266 323 81 5 chr18 1743962 1744076 -84244858 - L1ME LINE L1 -5361 709 574 2252 101 0 0 chr18 1744097 1744411 -84244523 - AluSx SINE Alu 0 314 1 457 297 55 85 chr18 1744554 1745046 -84243888 - L1ME LINE L1 -5573 497 21 1036 272 57 67 chr18 1745090 1745584 -84243350 - LTR33A LTR ERVL -2 521 31 1293 226 43 54 chr18 1745584 1745952 -84242982 + MLT1A1 LTR MaLR 1 364 -1 1036 272 57 67 chr18 1745952 1745983 -84242951 - LTR33A LTR ERVL -492 31 1 23 54 0 0 chr18 1746680 1746717 -84242217 + AT_rich Low_complexity Low_complexity 1 37 0 253 284 25 0 chr18 1747751 1747832 -84241102 + GA-rich Low_complexity Low_complexity 1 83 0 1570 219 65 0 chr18 1748331 1748655 -84240279 + L1M1 LINE L1 17 361 -7204 5957 146 35 35 chr18 1748660 1750416 -84238518 + L1MA3 LINE L1 4519 6260 -45 214 39 0 0 chr18 1750733 1750759 -84238175 + (TTTTC)n Simple_repeat Simple_repeat 2 70 0 2286 75 4 4 chr18 1750759 1751040 -84237894 - AluSc SINE Alu -28 281 1 203 289 36 0 chr18 1752277 1752360 -84236574 + (TATATG)n Simple_repeat Simple_repeat 6 91 0 306 103 17 0 chr18 1753523 1753581 -84235353 + L1MA3 LINE L1 6247 6305 0 21 0 0 0 chr18 1753589 1753610 -84235324 + AT_rich Low_complexity Low_complexity 1 21 0 2023 161 107 16 chr18 1754424 1754607 -84234327 + MLT2D LTR ERVL 5 170 -244 889 63 87 0 chr18 1754607 1754734 -84234200 + MER85 DNA T2_type 1 138 -1 2023 161 107 16 chr18 1754734 1754923 -84234011 + MLT2D LTR ERVL 170 411 -3 646 297 35 31 chr18 1754929 1755395 -84233539 - L1MEd LINE L1 -4744 1566 1060 635 139 0 37 chr18 1755439 1755567 -84233367 - AluJb SINE Alu 0 301 178 320 221 0 47 chr18 1755567 1755641 -84233293 - L1M4 LINE L1 -1336 4810 4739 200 83 0 28 chr18 1755641 1755677 -84233257 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 320 221 0 47 chr18 1755677 1755688 -84233246 - L1M4 LINE L1 -1407 4739 4729 * 923 245 70 15 chr18 1755684 1755957 -84232977 - L1ME3A LINE L1 -5 6165 5878 642 122 37 0 chr18 1756050 1756157 -84232777 - L1PA15 LINE L1 -3 6162 6052 2202 108 0 10 chr18 1757766 1758073 -84230861 - AluY SINE Alu -7 304 1 2338 248 49 42 chr18 1758740 1759046 -84229888 - L1M4 LINE L1 -1345 4801 4499 7750 22 0 0 chr18 1759046 1760029 -84228905 - L1PA2 LINE L1 -1 6154 5172 2338 248 49 42 chr18 1760029 1760704 -84228230 - L1M4 LINE L1 -1647 4499 3813 267 246 36 18 chr18 1760715 1760825 -84228109 - L1MEc LINE L1 -4411 2152 2041 448 262 59 21 chr18 1760840 1761027 -84227907 - L1MEc LINE L1 -4576 1987 1794 2119 148 3 11 chr18 1761032 1761409 -84227525 - L1MB3 LINE L1 -2 6181 5808 632 102 0 0 chr18 1761409 1761507 -84227427 - L1MEc LINE L1 -4009 2375 2278 636 316 47 34 chr18 1761573 1762079 -84226855 - L1MEc LINE L1 -4786 1777 1265 254 317 102 6 chr18 1762149 1762316 -84226618 - L1MEc LINE L1 -6132 431 249 1133 44 0 0 chr18 1762690 1762826 -84226108 - L1PA3 LINE L1 -7 6148 6013 243 306 22 0 chr18 1765010 1765144 -84223790 + L1MC/D LINE L1 3832 3968 -2178 30 27 0 0 chr18 1765170 1765207 -84223727 + AT_rich Low_complexity Low_complexity 1 37 0 595 327 91 31 chr18 1765234 1765793 -84223141 + L1MC/D LINE L1 4061 4652 -1494 234 200 33 17 chr18 1766044 1766104 -84222830 + L1P LINE L1 4901 4961 -1185 421 279 111 36 chr18 1766109 1766578 -84222356 + L1MC/D LINE L1 4986 5486 -774 828 274 19 0 chr18 1766624 1766836 -84222098 - MIR SINE MIR 0 262 47 496 276 89 5 chr18 1766892 1767106 -84221828 + L1MC/D LINE L1 5592 5823 -1985 309 51 0 0 chr18 1767186 1767225 -84221709 + (TG)n Simple_repeat Simple_repeat 1 39 0 402 46 215 0 chr18 1767281 1767346 -84221588 - MADE1 DNA Mariner -1 79 1 26 0 0 0 chr18 1767495 1767521 -84221413 + AT_rich Low_complexity Low_complexity 1 26 0 295 308 233 0 chr18 1767959 1768118 -84220816 - MIR3 SINE MIR -9 199 4 1022 219 77 107 chr18 1768607 1769064 -84219870 - MSTB2 LTR MaLR 0 457 15 193 250 71 0 chr18 1769362 1769418 -84219516 - L2 LINE L2 -4 3309 3250 290 339 104 0 chr18 1769840 1769955 -84218979 + L2 LINE L2 2681 2807 -507 558 297 38 10 chr18 1770082 1770291 -84218643 + LTR33 LTR ERVL 307 521 0 469 246 18 29 chr18 1770350 1770369 -84218565 - L1MA10 LINE L1 -2 6332 6314 2572 235 61 17 chr18 1770369 1771359 -84217575 - L1ME2 LINE L1 -13 6151 5079 1005 81 0 62 chr18 1771412 1771572 -84217362 + L1MA5 LINE L1 6147 6296 -4 189 152 30 0 chr18 1772675 1772708 -84216226 + L2 LINE L2 3208 3241 -72 194 62 31 0 chr18 1772990 1773022 -84215912 + (TTTTA)n Simple_repeat Simple_repeat 1 33 0 40461 65 8 7 chr18 1773022 1779139 -84209795 - L1PA5 LINE L1 -24 6130 13 1467 212 35 35 chr18 1779322 1779690 -84209244 + MLT1A2 LTR MaLR 7 374 0 1812 175 43 3 chr18 1780406 1780731 -84208203 + LTR53 LTR ERVL 1 338 -181 2791 86 69 14 chr18 1781034 1781074 -84207860 - MLT2A1 LTR ERVL 0 444 408 701 20 49 0 chr18 1781074 1781176 -84207758 + (TAGA)n Simple_repeat Simple_repeat 3 109 0 2791 86 69 14 chr18 1781176 1781556 -84207378 - MLT2A1 LTR ERVL -36 408 1 21092 61 11 6 chr18 1781556 1781643 -84207291 - HERVL-A1 LTR ERVL 0 5654 5569 2222 90 28 3 chr18 1781643 1781933 -84207001 + AluSc SINE Alu 1 297 -12 21092 61 11 6 chr18 1781933 1784480 -84204454 - HERVL-A1 LTR ERVL -85 5569 3008 1822 55 8 0 chr18 1784475 1784711 -84204223 - HERVL-A2 LTR ERVL -5416 238 1 * 2135 97 210 21 chr18 1784711 1785092 -84203842 - MLT2A2 LTR ERVL 0 453 1 4963 146 24 12 chr18 1787367 1788224 -84200710 - L1MA2 LINE L1 0 6304 5284 3742 35 4 9 chr18 1788224 1788684 -84200250 - L1PA4 LINE L1 -2 6153 5696 4963 146 24 12 chr18 1788684 1789087 -84199847 - L1MA2 LINE L1 -1020 5284 4887 218 360 24 82 chr18 1789097 1789389 -84199545 + L2 LINE L2 2532 2806 -508 215 77 0 51 chr18 1790198 1790237 -84198697 + (TATG)n Simple_repeat Simple_repeat 2 38 0 954 110 0 182 chr18 1790276 1790512 -84198422 + 7SK RNA RNA 1 193 0 263 341 28 68 chr18 1790670 1790846 -84198088 + L2 LINE L2 3102 3270 -2 390 310 23 16 chr18 1791403 1791532 -84197402 + MIR3 SINE MIR 40 169 -39 3745 99 25 2 chr18 1792712 1793266 -84195668 - L1MA3 LINE L1 -102 6203 5637 1305 63 6 6 chr18 1793264 1793438 -84195496 - L1M1 LINE L1 -494 5810 5637 * 6778 138 12 17 chr18 1793436 1795157 -84193777 - L1M1 LINE L1 -495 7229 5505 10332 177 29 9 chr18 1795168 1796971 -84191963 - L1M1 LINE L1 -5710 1855 17 230 247 0 55 chr18 1797323 1797396 -84191538 + HAL1b LINE L1 234 302 -1046 320 252 79 29 chr18 1797396 1797535 -84191399 + MLT1J1 LTR MaLR 3 148 -298 413 254 59 59 chr18 1797674 1797974 -84190960 - MLT1J1 LTR MaLR -3 443 150 556 241 155 37 chr18 1798523 1798834 -84190100 + MLT1J2 LTR MaLR 1 353 -56 625 281 43 9 chr18 1798899 1799130 -84189804 + HAL1b LINE L1 315 553 -795 760 330 81 40 chr18 1799591 1800464 -84188470 + L1 LINE L1 2630 3538 -2608 1239 197 54 20 chr18 1800763 1801057 -84187877 + L1MB8 LINE L1 5874 6177 -1 31 58 0 0 chr18 1801074 1801126 -84187808 + AT_rich Low_complexity Low_complexity 1 52 0 452 309 25 22 chr18 1801176 1801451 -84187483 + L1 LINE L1 4061 4336 -1810 342 319 17 0 chr18 1801506 1801625 -84187309 + MIR SINE MIR 68 188 -74 375 285 38 38 chr18 1801807 1801965 -84186969 + MER117 DNA MER1_type 3 160 -37 451 314 13 0 chr18 1802371 1802530 -84186404 - MARNA DNA Mariner -52 534 374 2004 41 0 97 chr18 1803913 1804203 -84184731 - AluY SINE Alu -16 295 34 1057 168 19 0 chr18 1804224 1804438 -84184496 - L1MA8 LINE L1 -10 6281 6064 203 298 0 0 chr18 1805193 1805240 -84183694 + MER5A DNA MER1_type 70 116 -73 2179 169 21 30 chr18 1805777 1805834 -84183100 + MSTA LTR MaLR 1 57 -371 2092 126 8 52 chr18 1805834 1806215 -84182719 - THE1B LTR MaLR 0 364 1 2179 169 21 30 chr18 1806215 1806588 -84182346 + MSTA LTR MaLR 57 427 -1 970 191 0 98 chr18 1807449 1807695 -84181239 + MER58A DNA MER1_type 3 224 0 426 283 174 53 chr18 1807871 1808210 -84180724 + L2 LINE L2 2828 3207 -106 1078 228 121 52 chr18 1809591 1809955 -84178979 + MLT1B LTR MaLR 2 390 0 515 350 62 34 chr18 1810707 1811204 -84177730 + L1M3b LINE L1 2 512 -5769 910 238 16 0 chr18 1811475 1811668 -84177266 + L1M3b LINE L1 1120 1315 -4966 1208 325 94 27 chr18 1811761 1812420 -84176514 - L2 LINE L2 -479 2835 2133 201 167 0 0 chr18 1812454 1812490 -84176444 + (TA)n Simple_repeat Simple_repeat 2 37 0 6347 99 5 0 chr18 1813337 1814932 -84174002 - L1PA10 LINE L1 -5 6163 4562 3465 115 2 0 chr18 1814932 1815447 -84173487 + L1PA10 LINE L1 4047 4562 -1584 2257 72 4 0 chr18 1815796 1816074 -84172860 + AluY SINE Alu 1 279 -32 302 0 26 0 chr18 1816076 1816114 -84172820 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 3113 203 53 38 chr18 1817214 1818028 -84170906 + LTR1B LTR ERV1 1 826 0 1709 191 136 11 chr18 1819175 1819640 -84169294 - L1ME1 LINE L1 -4 6162 5640 1278 251 26 68 chr18 1819650 1820139 -84168795 + MLT2B1 LTR ERVL 13 480 -40 585 64 0 0 chr18 1820139 1820217 -84168717 + (CA)n Simple_repeat Simple_repeat 1 78 0 1278 251 26 68 chr18 1820217 1820256 -84168678 + MLT2B1 LTR ERVL 480 519 -1 702 208 121 38 chr18 1820262 1820561 -84168373 - L1ME1 LINE L1 -660 5518 5254 260 133 0 0 chr18 1820567 1820612 -84168322 - L1MA4A LINE L1 -23 6280 6236 1939 330 75 8 chr18 1820622 1821445 -84167489 + L1MB8 LINE L1 89 966 -5893 1828 221 35 121 chr18 1821979 1822084 -84166850 + L1MB8 LINE L1 1223 1335 -5624 2202 105 3 0 chr18 1822084 1822393 -84166541 - AluSq SINE Alu 0 310 1 1828 221 35 121 chr18 1822393 1823367 -84165567 + L1MB8 LINE L1 1335 2188 -4771 2770 149 7 2 chr18 1823367 1823811 -84165123 + L1PA16 LINE L1 5712 6157 -9 1828 221 35 121 chr18 1823811 1823921 -84165013 + L1MB8 LINE L1 2188 2306 -4653 25 0 0 0 chr18 1824025 1824050 -84164884 + AT_rich Low_complexity Low_complexity 1 25 0 244 264 102 56 chr18 1824146 1824362 -84164572 + L1MB8 LINE L1 2473 2698 -4440 3769 225 39 73 chr18 1824451 1825106 -84163828 + L1MB8 LINE L1 2964 3639 -3318 1480 196 14 7 chr18 1825106 1825381 -84163553 - AluJb SINE Alu -35 277 1 3769 225 39 73 chr18 1825381 1826302 -84162632 + L1MB8 LINE L1 3639 4487 -2470 4280 214 35 48 chr18 1826324 1828459 -84160475 + L1MB8 LINE L1 4868 6983 -6 2019 106 0 24 chr18 1828555 1828883 -84160051 + AluSx SINE Alu 1 321 0 23 33 0 0 chr18 1828918 1828948 -84159986 + AT_rich Low_complexity Low_complexity 1 30 0 704 280 56 35 chr18 1829082 1829166 -84159768 - L1MCc LINE L1 -1712 5229 5148 2066 143 102 8 chr18 1829166 1829557 -84159377 - MSTA LTR MaLR 0 428 1 704 280 56 35 chr18 1829557 1829933 -84159001 - L1MCc LINE L1 -1793 5148 4759 15157 223 38 20 chr18 1829935 1830289 -84158645 - L1PA15 LINE L1 -1 6815 6469 387 0 0 0 chr18 1830289 1830332 -84158602 + (TG)n Simple_repeat Simple_repeat 2 44 0 15157 223 38 20 chr18 1830332 1833386 -84155548 - L1PA15 LINE L1 -347 6469 3470 212 0 0 35 chr18 1833386 1833415 -84155519 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 15157 223 38 20 chr18 1833415 1836220 -84152714 - L1PA15 LINE L1 -3346 3470 1 1544 285 119 15 chr18 1836316 1837397 -84151537 - L1MCc LINE L1 -2289 4652 3452 455 276 41 77 chr18 1837496 1837717 -84151217 - L1MCc LINE L1 -3992 3130 2918 286 159 16 0 chr18 1837718 1837781 -84151153 - LTR50 LTR ERVL -22 773 710 2244 198 33 41 chr18 1837815 1838301 -84150633 + MLT1D LTR MaLR 21 502 -3 276 258 21 21 chr18 1838314 1838411 -84150523 - LTR41 LTR ERVL -89 684 588 479 304 47 39 chr18 1838417 1838699 -84150235 - L1MCc LINE L1 -4786 2155 1840 306 266 78 56 chr18 1838701 1839099 -84149835 - L1MCc LINE L1 -4958 1465 1281 2524 104 14 14 chr18 1839099 1839463 -84149471 - THE1B LTR MaLR 0 364 1 306 266 78 56 chr18 1839463 1839532 -84149402 - L1MCc LINE L1 -5142 1281 1215 238 275 85 55 chr18 1839826 1840026 -84148908 + L1MC4a LINE L1 6055 6260 -1548 22 35 0 0 chr18 1840236 1840265 -84148669 + AT_rich Low_complexity Low_complexity 1 29 0 1449 276 86 45 chr18 1840316 1841125 -84147809 + L1MC4 LINE L1 6613 7491 -551 28 29 0 0 chr18 1841436 1841471 -84147463 + AT_rich Low_complexity Low_complexity 1 35 0 229 221 73 15 chr18 1841572 1841640 -84147294 - L1ME LINE L1 -360 5802 5731 412 312 90 52 chr18 1841659 1842004 -84146930 - L1ME LINE L1 -561 5613 5262 195 42 0 0 chr18 1842686 1842710 -84146224 + (GA)n Simple_repeat Simple_repeat 1 24 0 228 175 0 0 chr18 1844172 1844212 -84144722 + L2 LINE L2 3274 3313 0 886 63 0 0 chr18 1845103 1845214 -84143720 + AluY SINE Alu 199 309 -2 324 245 53 11 chr18 1845549 1845643 -84143291 + MLT1L LTR MaLR 347 444 -171 448 244 11 0 chr18 1845783 1845873 -84143061 - MLT1D LTR MaLR -414 91 1 211 294 7 118 chr18 1847790 1847926 -84141008 + MIR SINE MIR 32 152 -56 303 250 0 0 chr18 1848275 1848335 -84140599 + MIR SINE MIR 83 142 -66 920 157 6 0 chr18 1849120 1849286 -84139648 - L1MB3 LINE L1 -1 6182 6016 385 278 40 0 chr18 1849775 1849901 -84139033 + L1ME LINE L1 5523 5653 -468 2313 211 128 65 chr18 1849939 1850616 -84138318 + L1ME2 LINE L1 5269 5902 -262 1867 168 0 7 chr18 1850616 1850913 -84138021 + AluJo SINE Alu 3 297 -15 2308 75 0 14 chr18 1850914 1851208 -84137726 + AluY SINE Alu 1 290 -21 23 0 0 0 chr18 1851211 1851234 -84137700 + AT_rich Low_complexity Low_complexity 1 23 0 2313 211 128 65 chr18 1851234 1851363 -84137571 + L1ME2 LINE L1 5903 6156 -8 254 283 9 19 chr18 1851376 1851482 -84137452 + L1MC4 LINE L1 7003 7107 -935 * 907 253 12 12 chr18 1851455 1851696 -84137238 + L1MC4a LINE L1 7158 7398 -410 3209 165 21 22 chr18 1851696 1852279 -84136655 + Tigger3b DNA MER2_type 1 582 -649 2955 185 9 5 chr18 1852286 1852844 -84136090 - L1PA16 LINE L1 -9 6157 5598 1513 117 26 48 chr18 1852944 1853217 -84135717 + Tigger3b DNA MER2_type 316 582 -649 9749 199 16 16 chr18 1853224 1854942 -84133992 - L1PA16 LINE L1 -9 6157 4441 180 0 0 0 chr18 1854942 1854962 -84133972 + (TTG)n Simple_repeat Simple_repeat 1 20 0 9749 199 16 16 chr18 1854962 1856390 -84132544 - L1PA16 LINE L1 -1725 4441 3013 2076 170 13 80 chr18 1856398 1856495 -84132439 - L1MA5A LINE L1 -144 6153 6051 1979 142 3 13 chr18 1856495 1856798 -84132136 + AluSx SINE Alu 1 300 -12 2076 170 13 80 chr18 1856798 1857097 -84131837 - L1MA5A LINE L1 -246 6051 5781 226 157 0 20 chr18 1857097 1857148 -84131786 + LTR66 LTR ERVL 395 444 -166 2076 170 13 80 chr18 1857148 1857391 -84131543 - L1MA5A LINE L1 -516 5781 5523 3406 219 44 60 chr18 1857440 1858052 -84130882 - L1MCb LINE L1 -4767 1797 1177 2409 91 0 0 chr18 1858052 1858359 -84130575 - AluSc SINE Alu 0 309 3 3406 219 44 60 chr18 1858359 1859586 -84129348 - L1MCb LINE L1 -5387 1177 1 284 189 0 11 chr18 1859711 1859806 -84129128 + (TA)n Simple_repeat Simple_repeat 2 95 0 23 33 0 0 chr18 1860884 1860914 -84128020 + AT_rich Low_complexity Low_complexity 1 30 0 254 186 0 0 chr18 1861017 1861060 -84127874 - MER58 DNA MER1_type -2333 87 45 612 263 70 101 chr18 1863131 1863674 -84125260 + MLT1F LTR MaLR 3 528 -14 345 24 0 0 chr18 1863840 1863882 -84125052 + (TG)n Simple_repeat Simple_repeat 2 43 0 2118 111 0 10 chr18 1864311 1864609 -84124325 + AluY SINE Alu 1 295 -16 2236 132 84 8 chr18 1865263 1865657 -84123277 + MSTB LTR MaLR 1 424 -2 211 249 67 109 chr18 1865883 1866048 -84122886 + L2 LINE L2 3140 3297 -16 2718 129 31 0 chr18 1866699 1867118 -84121816 + MSTB1 LTR MaLR 1 432 0 255 282 113 53 chr18 1867652 1867843 -84121091 - MIR SINE MIR -47 215 16 1743 114 6 112 chr18 1867977 1868467 -84120467 + LTR21B LTR ERV1 1 438 0 423 314 71 0 chr18 1868887 1869056 -84119878 - MIR SINE MIR -6 256 76 324 0 0 0 chr18 1869098 1869134 -84119800 + (TG)n Simple_repeat Simple_repeat 2 37 0 28 29 0 0 chr18 1869219 1869254 -84119680 + AT_rich Low_complexity Low_complexity 1 35 0 233 263 45 75 chr18 1869569 1869702 -84119232 - HAL1b LINE L1 -474 874 746 1201 258 157 31 chr18 1870243 1870824 -84118110 - HAL1 LINE L1 -586 1921 1268 307 295 93 8 chr18 1870834 1870963 -84117971 - HAL1 LINE L1 -1260 1247 1108 336 316 109 27 chr18 1870987 1871243 -84117691 - HAL1 LINE L1 -1451 1056 780 1385 242 43 58 chr18 1871793 1872306 -84116628 - MLT1D LTR MaLR 0 505 1 2237 234 49 67 chr18 1872808 1873812 -84115122 - L1M3c LINE L1 -4845 2192 9 429 318 20 40 chr18 1873822 1874023 -84114911 - MIR SINE MIR -55 207 11 422 330 23 23 chr18 1874922 1875095 -84113839 - MIR SINE MIR -53 209 37 259 367 13 20 chr18 1875175 1875325 -84113609 + L2 LINE L2 3146 3294 -19 22 0 0 0 chr18 1875555 1875577 -84113357 + AT_rich Low_complexity Low_complexity 1 22 0 1535 207 24 37 chr18 1876148 1876524 -84112410 + MLT1A2 LTR MaLR 1 371 -3 2389 162 36 2 chr18 1876627 1877041 -84111893 + MSTA LTR MaLR 1 428 0 426 262 8 40 chr18 1877090 1877216 -84111718 + L1MB7 LINE L1 11 132 -6727 * 467 237 99 8 chr18 1877211 1877342 -84111592 + L1MB7 LINE L1 666 808 -6051 2121 214 39 26 chr18 1877361 1877895 -84111039 - MER74A LTR ERVL -14 544 4 3172 243 47 42 chr18 1877900 1879531 -84109403 + L1MB7 LINE L1 819 2417 -4542 295 281 45 45 chr18 1879675 1879853 -84109081 + L1MB7 LINE L1 2480 2657 -4481 13405 182 23 111 chr18 1879871 1883779 -84105155 + L1P LINE L1 1427 4993 -1153 668 173 20 7 chr18 1883778 1883928 -84105006 + L1P3 LINE L1 1151 1302 -5159 * 8264 200 53 63 chr18 1884018 1884150 -84104784 + L1MB7 LINE L1 3265 3397 -3598 2216 110 0 7 chr18 1884150 1884458 -84104476 + AluSg SINE Alu 5 310 0 8264 200 53 63 chr18 1884458 1886090 -84102844 + L1MB7 LINE L1 3397 5044 -1951 309 51 0 0 chr18 1886090 1886129 -84102805 + (TAA)n Simple_repeat Simple_repeat 2 40 0 8264 200 53 63 chr18 1886129 1888121 -84100813 + L1MB7 LINE L1 5044 6990 -5 876 56 0 0 chr18 1888353 1888497 -84100437 + AluSp/q SINE Alu 178 321 0 24 32 0 0 chr18 1888726 1888757 -84100177 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr18 1889080 1889108 -84099826 + AT_rich Low_complexity Low_complexity 1 28 0 1903 119 4 0 chr18 1889202 1889470 -84099464 + AluSx SINE Alu 37 305 -7 357 304 187 30 chr18 1889507 1889806 -84099128 + L3 LINE CR1 1178 1523 -54 272 302 62 0 chr18 1889807 1889903 -84099031 - MER94 DNA DNA -3 131 30 616 280 6 29 chr18 1889925 1890100 -84098834 + MER5B DNA MER1_type 1 171 -7 288 0 0 0 chr18 1890287 1890319 -84098615 + (TA)n Simple_repeat Simple_repeat 2 33 0 1810 268 192 7 chr18 1892654 1893394 -84095540 - L2 LINE L2 -1329 1985 1109 1808 204 78 22 chr18 1893731 1894220 -84094714 - Charlie1b DNA MER1_type -7 516 1 183 100 0 0 chr18 1894364 1894394 -84094540 + (TTTTTG)n Simple_repeat Simple_repeat 3 32 0 200 81 81 27 chr18 1895734 1895768 -84093166 - L2 LINE L2 -3 3310 3275 260 212 0 91 chr18 1895768 1895834 -84093100 + MER5B DNA MER1_type 3 62 -116 475 255 35 41 chr18 1895834 1895979 -84092955 + MER5B DNA MER1_type 14 157 -21 410 327 68 23 chr18 1896118 1896338 -84092596 - MIR SINE MIR -32 230 1 290 282 141 21 chr18 1896339 1896481 -84092453 - L2 LINE L2 -219 3053 2895 801 318 26 26 chr18 1897070 1897448 -84091486 - MLT1I LTR MaLR -31 378 1 1706 126 86 43 chr18 1898235 1898560 -84090374 + MER44D DNA MER2_type 1 609 0 1256 312 43 20 chr18 1900318 1900877 -84088057 - L2 LINE L2 -4 3309 2737 2720 120 14 2 chr18 1900884 1901326 -84087608 - L1MA5A LINE L1 -6 6291 5845 9171 159 40 31 chr18 1901332 1901626 -84087308 + L1MA5A LINE L1 3380 3670 -2627 814 118 8 0 chr18 1901626 1901753 -84087181 - L1MA5A LINE L1 -5 6292 6165 9171 159 40 31 chr18 1901753 1903890 -84085044 + L1MA5A LINE L1 3670 5829 -468 812 281 166 9 chr18 1903909 1904332 -84084602 - L2 LINE L2 -1385 1929 1441 14475 190 26 8 chr18 1904705 1910128 -84078806 + L1PB1 LINE L1 749 6502 -365 495 0 0 0 chr18 1910128 1910183 -84078751 + (TA)n Simple_repeat Simple_repeat 1 55 0 14475 190 26 8 chr18 1910183 1910556 -84078378 + L1PB1 LINE L1 6502 6867 0 580 261 133 39 chr18 1910641 1911354 -84077580 + L1ME LINE L1 866 1652 -4563 22 35 0 0 chr18 1911442 1911471 -84077463 + AT_rich Low_complexity Low_complexity 1 29 0 511 279 80 14 chr18 1911506 1911973 -84076961 + L1ME LINE L1 1974 2449 -3766 441 306 136 34 chr18 1911981 1912363 -84076571 + L1ME2 LINE L1 768 1188 -5017 409 273 108 13 chr18 1912372 1912603 -84076331 + L1ME2 LINE L1 2477 2729 -3486 786 238 35 19 chr18 1912618 1912879 -84076055 + L1ME2 LINE L1 2764 3028 -3187 1963 145 3 0 chr18 1912880 1913177 -84075757 + AluSx SINE Alu 1 298 -14 370 340 119 35 chr18 1913799 1914111 -84074823 + HAL1b LINE L1 569 906 -442 23 0 0 0 chr18 1914227 1914250 -84074684 + AT_rich Low_complexity Low_complexity 1 23 0 507 283 65 80 chr18 1914707 1914970 -84073964 + L1ME2 LINE L1 3129 3394 -2821 1800 88 107 0 chr18 1914970 1915233 -84073701 - AluSg SINE Alu -19 291 1 507 283 65 80 chr18 1915233 1915916 -84073018 + L1ME2 LINE L1 3394 4061 -2154 2198 223 67 19 chr18 1915996 1916737 -84072197 + L1ME2 LINE L1 5260 6039 -194 1659 143 39 36 chr18 1916881 1917188 -84071746 + AluJo SINE Alu 1 308 -4 1602 136 65 71 chr18 1917216 1917555 -84071379 + MER1B DNA MER1_type 1 337 0 22 35 0 0 chr18 1917936 1917965 -84070969 + AT_rich Low_complexity Low_complexity 1 29 0 5483 28 0 0 chr18 1918273 1918914 -84070020 - L1PA4 LINE L1 -3 6152 5512 22 35 0 0 chr18 1919002 1919031 -84069903 + AT_rich Low_complexity Low_complexity 1 29 0 27 29 0 0 chr18 1919369 1919403 -84069531 + AT_rich Low_complexity Low_complexity 1 34 0 200 135 0 27 chr18 1919532 1919569 -84069365 + (TTA)n Simple_repeat Simple_repeat 2 37 0 204 151 14 68 chr18 1919583 1919656 -84069278 + (TTTAA)n Simple_repeat Simple_repeat 1 69 0 2094 110 10 17 chr18 1919666 1919803 -84069131 + AluSq SINE Alu 1 137 -176 2510 50 0 0 chr18 1919803 1920102 -84068832 + AluY SINE Alu 1 299 -12 2094 110 10 17 chr18 1920102 1920264 -84068670 + AluSq SINE Alu 137 298 -15 487 146 87 10 chr18 1920269 1920372 -84068562 - L1MB2 LINE L1 -10 6161 6051 431 214 54 9 chr18 1921213 1921325 -84067609 + MIR SINE MIR 81 197 -65 1293 87 22 0 chr18 1922525 1922709 -84066225 - L1PA13 LINE L1 -5 6158 5971 1318 210 103 44 chr18 1923340 1923817 -84065117 + LTR10B LTR ERV1 1 505 0 653 268 155 5 chr18 1924810 1925023 -84063911 - MIR SINE MIR 0 262 18 296 299 63 16 chr18 1925645 1925804 -84063130 + MIR SINE MIR 20 189 -67 2140 237 51 36 chr18 1926302 1926892 -84062042 + MLT1E2 LTR MaLR 26 624 -2 397 287 84 28 chr18 1927070 1927213 -84061721 - L2 LINE L2 0 3313 3163 401 290 51 82 chr18 1927231 1927562 -84061372 - L2 LINE L2 -473 2841 2521 345 323 5 37 chr18 1928442 1928631 -84060303 - L2 LINE L2 -14 3299 3117 186 103 0 0 chr18 1929068 1929097 -84059837 + (TA)n Simple_repeat Simple_repeat 1 29 0 1374 194 24 97 chr18 1929136 1929417 -84059517 - MER2 DNA MER2_type 0 345 96 1803 80 24 0 chr18 1929417 1929666 -84059268 - L1PA10 LINE L1 -5 6163 5909 1374 194 24 97 chr18 1929666 1929755 -84059179 - MER2 DNA MER2_type -249 96 2 223 311 96 15 chr18 1929756 1929891 -84059043 - MIR SINE MIR -111 151 6 203 319 52 11 chr18 1930817 1930932 -84058002 + MIR3 SINE MIR 50 167 -41 1111 140 18 140 chr18 1931239 1931517 -84057417 - MLT1A1 LTR MaLR 0 365 122 620 176 0 0 chr18 1931664 1931766 -84057168 - MLT1A1 LTR MaLR -272 102 1 2123 27 0 12 chr18 1931795 1932052 -84056882 + L1PA4 LINE L1 5901 6154 -1 506 316 163 3 chr18 1932052 1932340 -84056594 + MLT1I LTR MaLR 30 363 -46 2964 160 26 23 chr18 1932357 1932925 -84056009 - L1MB1 LINE L1 -2 7585 7016 2256 187 30 5 chr18 1932970 1933377 -84055557 - MLT2B1 LTR ERVL -99 421 5 12653 230 43 17 chr18 1933384 1934106 -84054828 - L1MB1 LINE L1 -729 7002 6300 2654 97 11 0 chr18 1934106 1934466 -84054468 + THE1B LTR MaLR 1 364 0 12653 230 43 17 chr18 1934466 1938043 -84050891 - L1MB1 LINE L1 -1431 6300 2574 1037 106 66 0 chr18 1938045 1938196 -84050738 + AluSc SINE Alu 142 302 -7 2241 229 60 12 chr18 1938626 1939590 -84049344 + L1ME4a LINE L1 4736 5756 -410 569 263 21 57 chr18 1939619 1939813 -84049121 + HERV16 LTR ERVL 1738 1924 -3072 745 311 58 24 chr18 1940069 1940451 -84048483 + LTR16A LTR ERVL 33 427 -23 1006 238 5 9 chr18 1940519 1940733 -84048201 + AluJo SINE Alu 1 213 -99 299 186 26 128 chr18 1940755 1940830 -84048104 + L1ME4a LINE L1 5981 6033 -88 735 164 8 8 chr18 1940830 1940958 -84047976 - FLAM_C SINE Alu -5 128 1 299 186 26 128 chr18 1940958 1941038 -84047896 + L1ME4a LINE L1 6033 6120 -1 347 277 124 28 chr18 1941077 1941254 -84047680 + MIR SINE MIR 20 213 -49 350 260 135 45 chr18 1942614 1942814 -84046120 - L1ME1 LINE L1 -4 6162 5945 27 73 0 0 chr18 1943286 1943341 -84045593 + AT_rich Low_complexity Low_complexity 1 55 0 28 0 0 0 chr18 1943677 1943705 -84045229 + AT_rich Low_complexity Low_complexity 1 28 0 1530 154 0 0 chr18 1945043 1945263 -84043671 - AluSx SINE Alu -92 220 1 318 351 51 51 chr18 1945591 1945867 -84043067 - L1ME1 LINE L1 -508 5613 5338 28 48 0 0 chr18 1945968 1946010 -84042924 + AT_rich Low_complexity Low_complexity 1 42 0 2066 202 40 44 chr18 1946973 1947005 -84041929 - MLT1D LTR MaLR -1 504 473 983 201 29 0 chr18 1947005 1947209 -84041725 - MER6B DNA MER2_type 0 210 1 2066 202 40 44 chr18 1947209 1947680 -84041254 - MLT1D LTR MaLR -32 473 3 1746 157 48 53 chr18 1948640 1948711 -84040223 - THE1C LTR MaLR 0 375 305 2142 133 0 19 chr18 1948711 1949027 -84039907 + AluSx SINE Alu 3 312 0 1746 157 48 53 chr18 1949027 1949311 -84039623 - THE1C LTR MaLR -70 305 22 9756 113 7 0 chr18 1949311 1950665 -84038269 + THE1B-int LTR MaLR 218 1580 0 2258 114 39 22 chr18 1950665 1951023 -84037911 + THE1B LTR MaLR 1 364 0 551 198 24 8 chr18 1951026 1951152 -84037782 + MER39 LTR ERV1 580 707 0 380 347 34 6 chr18 1951208 1951384 -84037550 + MLT1J LTR MaLR 1 181 -330 412 271 88 25 chr18 1953223 1953427 -84035507 + MLT1H LTR MaLR 334 547 -2 1706 177 114 38 chr18 1954348 1954744 -84034190 + MSTA LTR MaLR 1 426 -2 2187 104 0 0 chr18 1955181 1955483 -84033451 + AluSx SINE Alu 4 305 0 7032 53 2 5 chr18 1956312 1957545 -84031389 + L1PA6 LINE L1 4940 6170 0 20828 165 39 39 chr18 1957552 1957855 -84031079 + L1MA2 LINE L1 16 317 -7406 2238 197 40 68 chr18 1957855 1958485 -84030449 + LTR9 LTR ERV1 1 612 0 20828 165 39 39 chr18 1958485 1963787 -84025147 + L1MA2 LINE L1 317 5799 -1924 1230 122 0 0 chr18 1963787 1963951 -84024983 + AluSg/x SINE Alu 137 300 -12 20828 165 39 39 chr18 1963951 1965877 -84023057 + L1MA2 LINE L1 5799 7723 0 9812 181 30 14 chr18 1965901 1967695 -84021239 - L1M1 LINE L1 -5731 1834 12 579 280 28 129 chr18 1967702 1968098 -84020836 - L2 LINE L2 -4 3268 2913 335 223 11 11 chr18 1968275 1968369 -84020565 + L1M4 LINE L1 5701 5794 -390 6852 22 51 0 chr18 1969353 1970295 -84018639 + L1PA3 LINE L1 5189 6185 0 213 359 26 0 chr18 1970295 1970373 -84018561 - L2 LINE L2 -70 3202 3123 181 319 14 14 chr18 1970368 1970440 -84018494 - L2 LINE L2 -1018 2296 2225 * 6245 56 151 63 chr18 1970443 1971521 -84017413 + MER11A LTR ERVK 1 1266 0 218 236 28 14 chr18 1971546 1971618 -84017316 + GA-rich Low_complexity Low_complexity 4 76 0 363 200 0 53 chr18 1971677 1971772 -84017162 + L2 LINE L2 2268 2357 -957 190 345 29 29 chr18 1971769 1971908 -84017026 - L2 LINE L2 -1234 2080 1942 * 202 271 40 124 chr18 1971935 1972160 -84016774 - L2 LINE L2 -427 2887 2682 458 122 0 0 chr18 1972201 1972283 -84016651 - L1PB1 LINE L1 -1 6150 6069 207 257 0 43 chr18 1973258 1973328 -84015606 + MIR SINE MIR 123 189 -73 377 288 27 22 chr18 1973352 1973536 -84015398 + L1ME3 LINE L1 19 203 -6220 228 339 16 25 chr18 1973578 1973699 -84015235 + L1ME3 LINE L1 289 408 -6015 333 285 57 13 chr18 1974167 1974325 -84014609 + L1ME3 LINE L1 1169 1333 -5090 801 251 69 108 chr18 1974345 1974611 -84014323 + L1ME3 LINE L1 1912 2152 -4791 648 139 0 0 chr18 1974611 1974726 -84014208 + L1MA4 LINE L1 6183 6297 -3 801 251 69 108 chr18 1974726 1974950 -84013984 + L1ME3 LINE L1 2152 2383 -4560 1435 250 83 49 chr18 1975049 1976028 -84012906 + L1ME3 LINE L1 2594 3620 -3321 3826 226 114 40 chr18 1976037 1977155 -84011779 + L1MB8 LINE L1 3694 4728 -2245 1183 209 36 105 chr18 1977155 1977547 -84011387 + MLT1A1 LTR MaLR 1 365 0 3826 226 114 40 chr18 1977547 1979452 -84009482 + L1MB8 LINE L1 4728 6971 -2 254 213 13 13 chr18 1979449 1979524 -84009410 + L1ME3 LINE L1 5111 5185 -1756 * 1833 286 44 18 chr18 1979522 1980135 -84008799 + L1ME3 LINE L1 6271 6899 -58 352 325 68 28 chr18 1980183 1980432 -84008502 - L2 LINE L2 -1385 1929 1671 361 306 69 17 chr18 1980482 1980655 -84008279 + MIR SINE MIR 4 185 -77 621 196 0 0 chr18 1981854 1981961 -84006973 + FLAM_A SINE Alu 1 107 -35 342 308 115 0 chr18 1981964 1982094 -84006840 + MIR3 SINE MIR 21 165 -43 544 298 63 50 chr18 1983402 1983701 -84005233 + L1MB7 LINE L1 11 313 -6546 343 314 102 71 chr18 1983887 1984209 -84004725 + L1MB7 LINE L1 230 561 -6298 2734 229 69 51 chr18 1984214 1985431 -84003503 + L1MB7 LINE L1 938 2356 -4782 3480 180 36 6 chr18 1985431 1986146 -84002788 + L1MB7 LINE L1 6240 6976 -19 2734 229 69 51 chr18 1986146 1986500 -84002434 + L1MB7 LINE L1 2356 2702 -4436 490 286 74 64 chr18 1988270 1988473 -84000461 - MIR SINE MIR -57 205 1 347 339 138 43 chr18 1988779 1989106 -83999828 - L2 LINE L2 -8 3264 2907 309 297 119 64 chr18 1989199 1989376 -83999558 + MIR SINE MIR 8 204 -58 2133 126 0 0 chr18 1989376 1989681 -83999253 + AluSx SINE Alu 1 305 0 309 297 119 64 chr18 1989681 1989738 -83999196 + MIR SINE MIR 204 256 -6 567 315 33 0 chr18 1989953 1990134 -83998800 - MER20B DNA MER1_type -592 191 5 269 277 161 9 chr18 1990172 1990284 -83998650 - MIR SINE MIR -62 146 18 1981 44 0 0 chr18 1991395 1991647 -83997287 - L1P LINE L1 -893 5253 5002 5415 57 3 3 chr18 1991647 1992379 -83996555 + L1PA7 LINE L1 5448 6182 0 8736 183 15 126 chr18 1993089 1994465 -83994469 + L1PA16 LINE L1 2257 3784 -2382 446 260 33 37 chr18 1994465 1994708 -83994226 + MER41B LTR ERV1 55 430 -205 8736 183 15 126 chr18 1994708 1996046 -83992888 + L1PA16 LINE L1 3784 4532 -1634 2083 146 0 0 chr18 1996046 1996354 -83992580 + AluSx SINE Alu 1 308 -4 8736 183 15 126 chr18 1996354 1997818 -83991116 + L1PA16 LINE L1 4532 6157 -9 22 35 0 0 chr18 1997818 1997847 -83991087 + AT_rich Low_complexity Low_complexity 1 29 0 16834 148 66 10 chr18 1998011 1998523 -83990411 + L1PBa LINE L1 2 483 -6379 2374 15 0 8 chr18 1998523 1998790 -83990144 + AluY SINE Alu 40 304 -7 16834 148 66 10 chr18 1998790 1999253 -83989681 + L1PBa LINE L1 483 918 -5944 3892 81 182 2 chr18 1999253 1999836 -83989098 + LTR12 LTR ERV1 1 688 0 16834 148 66 10 chr18 1999836 2002537 -83986397 + L1PBa LINE L1 918 3980 -2882 1695 177 10 13 chr18 2002537 2002848 -83986086 + AluSx SINE Alu 2 311 -1 16834 148 66 10 chr18 2002848 2003794 -83985140 + L1PBa LINE L1 3980 4871 -1991 194 81 27 0 chr18 2003794 2003831 -83985103 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 714 140 9 0 chr18 2003847 2003954 -83984980 + AluSq/x SINE Alu 1 108 -205 663 235 39 15 chr18 2003962 2004166 -83984768 + L1MA9 LINE L1 6062 6270 -42 652 323 56 16 chr18 2004284 2004535 -83984399 - MIR SINE MIR 0 262 2 255 270 79 79 chr18 2005438 2005590 -83983344 + MIR3 SINE MIR 21 172 -36 325 227 156 28 chr18 2005784 2005925 -83983009 + L2 LINE L2 3021 3179 -134 302 134 58 17 chr18 2005925 2006097 -83982837 + (TA)n Simple_repeat Simple_repeat 2 180 0 205 333 0 16 chr18 2006115 2006178 -83982756 + L2 LINE L2 3209 3270 -43 302 294 56 77 chr18 2007264 2007407 -83981527 + MIR3 SINE MIR 45 184 -24 262 298 230 12 chr18 2008100 2008261 -83980673 - MIR SINE MIR -52 210 15 243 244 47 47 chr18 2008676 2008762 -83980172 + MIR3 SINE MIR 15 100 -108 402 177 21 0 chr18 2008903 2008999 -83979935 + (GGATG)n Simple_repeat Simple_repeat 3 100 0 469 268 153 29 chr18 2009323 2009532 -83979402 + MIR SINE MIR 28 262 0 2380 25 27 0 chr18 2012871 2013205 -83975729 + L1P1 LINE L1 5240 5614 -540 * 5521 118 16 7 chr18 2013203 2014055 -83974879 + L1PA16 LINE L1 5306 6165 -1 228 31 0 0 chr18 2014088 2014120 -83974814 - L1P LINE L1 -2443 3703 3672 4629 24 0 0 chr18 2014120 2014658 -83974276 + L1PA3 LINE L1 5614 6151 -4 30 59 0 0 chr18 2014658 2014709 -83974225 + AT_rich Low_complexity Low_complexity 1 51 0 798 143 5 63 chr18 2014741 2014930 -83974004 + L1MD3 LINE L1 6879 7056 -939 410 295 133 54 chr18 2015756 2015997 -83972937 - L2 LINE L2 -1 3271 3012 313 274 0 68 chr18 2016052 2016169 -83972765 + L2 LINE L2 2202 2310 -1004 3747 117 75 72 chr18 2016464 2017740 -83971194 - pTR5 LTR ERV1 -144 2294 742 261 345 53 29 chr18 2017753 2017924 -83971010 + L2 LINE L2 2611 2785 -529 253 326 21 56 chr18 2018047 2018191 -83970743 + L2 LINE L2 2946 3084 -188 273 288 219 0 chr18 2018502 2018648 -83970286 - MIR SINE MIR -57 205 28 3875 142 49 3 chr18 2018950 2019648 -83969286 + L1MB3 LINE L1 5443 6172 -11 843 212 80 12 chr18 2019926 2020185 -83968749 + LTR16C LTR ERVL 192 491 0 528 174 17 9 chr18 2021423 2021538 -83967396 - L1MA7 LINE L1 -6 6285 6170 21 0 0 0 chr18 2021755 2021776 -83967158 + AT_rich Low_complexity Low_complexity 1 21 0 319 325 90 18 chr18 2021813 2021979 -83966955 - MIR SINE MIR -82 180 3 824 108 0 47 chr18 2022045 2022174 -83966760 + FLAM_C SINE Alu 1 123 -10 342 258 106 61 chr18 2022801 2022999 -83965935 - MIR SINE MIR -54 208 2 2199 108 7 0 chr18 2023617 2023924 -83965010 + AluSq SINE Alu 1 309 -4 246 279 104 27 chr18 2025263 2025396 -83963538 - MIR SINE MIR -56 152 1 3342 218 113 24 chr18 2025708 2026754 -83962180 + L1PB1 LINE L1 19 1157 -5706 8603 156 41 5 chr18 2026777 2029156 -83959778 + L1PB1 LINE L1 1332 3796 -3066 27288 70 12 3 chr18 2029256 2033507 -83955427 + L1PA6 LINE L1 1631 5915 -239 9602 189 3 2 chr18 2033608 2036123 -83952811 + L1PB1 LINE L1 3990 6507 -360 189 286 0 0 chr18 2036123 2036186 -83952748 + (CATATA)n Simple_repeat Simple_repeat 5 67 0 233 253 72 0 chr18 2036186 2036269 -83952665 - L1MC4 LINE L1 -1339 6703 6615 262 273 0 0 chr18 2036281 2036369 -83952565 - L1MC4 LINE L1 -1340 6702 6615 238 241 0 0 chr18 2036369 2036412 -83952522 + (CATA)n Simple_repeat Simple_repeat 1 46 -8 2162 159 0 3 chr18 2036412 2036776 -83952158 + L1PB1 LINE L1 6497 6859 -8 238 241 0 0 chr18 2036776 2036786 -83952148 + (CATA)n Simple_repeat Simple_repeat 45 54 0 242 346 82 70 chr18 2037889 2038218 -83950716 + L2 LINE L2 2939 3271 -1 246 321 12 0 chr18 2038292 2038373 -83950561 + L2 LINE L2 3232 3313 0 401 210 43 117 chr18 2038500 2038662 -83950272 + MIR SINE MIR 76 225 -37 3316 139 7 2 chr18 2040289 2040829 -83948105 - L1PA15 LINE L1 -1 6164 5622 939 112 0 0 chr18 2040830 2040955 -83947979 + AluSg SINE Alu 3 127 -183 732 269 23 6 chr18 2041367 2041542 -83947392 - MER5B DNA MER1_type 0 178 1 270 0 0 0 chr18 2041965 2041995 -83946939 + (TC)n Simple_repeat Simple_repeat 1 30 0 219 36 0 0 chr18 2041994 2042022 -83946912 + (CA)n Simple_repeat Simple_repeat 1 28 0 * 1108 131 0 0 chr18 2042322 2042475 -83946459 + AluSg SINE Alu 135 287 -23 574 186 106 9 chr18 2043463 2043576 -83945358 - FLAM_C SINE Alu -9 124 1 307 225 72 105 chr18 2043695 2043904 -83945030 - L1MC4 LINE L1 -1331 6711 6510 21 0 0 0 chr18 2044037 2044058 -83944876 + AT_rich Low_complexity Low_complexity 1 21 0 180 274 0 20 chr18 2045015 2045066 -83943868 + MIR3 SINE MIR 145 194 -14 25 31 0 0 chr18 2045695 2045727 -83943207 + AT_rich Low_complexity Low_complexity 1 32 0 2239 112 3 6 chr18 2047571 2047884 -83941050 - AluSx SINE Alu 0 312 1 21 0 0 0 chr18 2048131 2048152 -83940782 + AT_rich Low_complexity Low_complexity 1 21 0 360 261 89 57 chr18 2049170 2049327 -83939607 - L2 LINE L2 -8 3305 3144 2646 223 131 52 chr18 2049377 2050506 -83938428 + L1MEc LINE L1 337 1554 -4842 2626 251 44 17 chr18 2050509 2052550 -83936384 + L1MEc LINE L1 1877 3958 -2257 3159 98 30 0 chr18 2053343 2053783 -83935151 + MLT2A2 LTR ERVL 1 453 0 452 232 61 61 chr18 2054537 2054735 -83934199 - MER63A DNA MER1_type -8 202 5 13008 230 45 21 chr18 2056172 2058505 -83930429 + L1MA9 LINE L1 11 2287 -3913 3005 72 21 77 chr18 2058505 2058975 -83929959 - MLT2A1 LTR ERVL 0 444 1 13008 230 45 21 chr18 2058975 2059180 -83929754 + L1MA9 LINE L1 2287 2486 -3714 2209 108 0 3 chr18 2059180 2059468 -83929466 + AluSq SINE Alu 1 287 -26 504 0 0 0 chr18 2059468 2059524 -83929410 + (TA)n Simple_repeat Simple_repeat 2 57 0 13008 230 45 21 chr18 2059524 2059684 -83929250 + L1MA9 LINE L1 2486 2641 -3559 1815 171 0 0 chr18 2059684 2059965 -83928969 + AluJb SINE Alu 2 282 -30 600 53 0 0 chr18 2059965 2060041 -83928893 + (GGAA)n Simple_repeat Simple_repeat 2 77 0 13008 230 45 21 chr18 2060041 2060914 -83928020 + L1MA9 LINE L1 2641 3492 -2708 2701 96 3 5 chr18 2060914 2061290 -83927644 + THE1C LTR MaLR 1 375 0 13008 230 45 21 chr18 2061290 2062666 -83926268 + L1MA9 LINE L1 3492 4834 -1366 414 0 0 0 chr18 2062666 2062712 -83926222 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 13008 230 45 21 chr18 2062712 2063413 -83925521 + L1MA9 LINE L1 4834 4915 -1285 2323 102 0 6 chr18 2063413 2063726 -83925208 + AluY SINE Alu 1 311 0 13008 230 45 21 chr18 2063726 2064879 -83924055 + L1MA9 LINE L1 4915 6039 -161 201 39 0 0 chr18 2064879 2064905 -83924029 + (CA)n Simple_repeat Simple_repeat 1 26 0 726 116 23 16 chr18 2065027 2065156 -83923778 + L1MA4A LINE L1 6169 6298 -5 1864 187 106 9 chr18 2065617 2066190 -83922744 + MLT1E2 LTR MaLR 1 611 -15 221 265 0 0 chr18 2067011 2067060 -83921874 + MIR3 SINE MIR 151 199 -9 26 30 0 0 chr18 2068450 2068483 -83920451 + AT_rich Low_complexity Low_complexity 1 33 0 232 298 12 12 chr18 2069257 2069341 -83919593 + MLT1L LTR MaLR 1 84 -531 25 31 0 0 chr18 2069782 2069814 -83919120 + AT_rich Low_complexity Low_complexity 1 32 0 5418 120 25 28 chr18 2070001 2070989 -83917945 + L1MA6 LINE L1 5254 6238 -62 352 351 53 16 chr18 2071725 2071913 -83917021 - MIR SINE MIR -50 212 18 * 363 253 96 27 chr18 2071904 2072050 -83916884 + MIR SINE MIR 107 262 0 266 312 97 19 chr18 2072238 2072392 -83916542 - L3 LINE CR1 -620 957 792 4289 45 9 6 chr18 2072683 2073222 -83915712 + L1PA8 LINE L1 5628 6168 -4 522 220 121 14 chr18 2073470 2073611 -83915323 + MER5B DNA MER1_type 1 156 -22 183 390 65 13 chr18 2073572 2073649 -83915285 + L3b LINE CR1 1484 1564 -19 * 303 319 90 6 chr18 2074274 2074440 -83914494 + MIR SINE MIR 77 256 -6 204 97 0 0 chr18 2074762 2074793 -83914141 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 2057 320 147 38 chr18 2074857 2076690 -83912244 - L2 LINE L2 -12 3260 1049 1760 173 0 7 chr18 2076690 2076979 -83911955 + AluJo SINE Alu 1 287 -25 2057 320 147 38 chr18 2076979 2077728 -83911206 - L2 LINE L2 -2223 1049 383 465 196 21 10 chr18 2077794 2077891 -83911043 - MIR SINE MIR -106 156 59 262 336 109 0 chr18 2078112 2078222 -83910712 + L2 LINE L2 3182 3303 -10 12434 128 12 143 chr18 2078632 2080907 -83908027 + L1PA6 LINE L1 12 1728 -4418 3262 43 0 0 chr18 2080907 2081305 -83907629 - L1PA5 LINE L1 0 6154 5757 12434 128 12 143 chr18 2081305 2082301 -83906633 + L1PA6 LINE L1 1728 2853 -3293 40863 33 23 2 chr18 2082302 2088321 -83900613 + L1PA3 LINE L1 7 6155 0 281 26 26 0 chr18 2088329 2088367 -83900567 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 6430 96 10 4 chr18 2088367 2089356 -83899578 + L1PA6 LINE L1 2840 3837 -2309 449 49 0 0 chr18 2089356 2089417 -83899517 + L1P LINE L1 5041 5101 -1045 7070 56 6 0 chr18 2089517 2091013 -83897921 + L1PA6 LINE L1 4622 6149 -5 666 289 40 23 chr18 2091037 2091435 -83897499 + L1ME3A LINE L1 3243 3647 -2499 1835 237 124 41 chr18 2091479 2092527 -83896407 + L1ME3A LINE L1 5030 6170 0 2884 212 45 14 chr18 2092805 2093568 -83895366 + L1ME2 LINE L1 5370 6155 -9 323 335 74 20 chr18 2093606 2093809 -83895125 + L1ME LINE L1 5280 5493 -749 1229 98 6 12 chr18 2093810 2093974 -83894960 - AluSp SINE Alu -94 219 57 1268 89 17 0 chr18 2094080 2094260 -83894674 - L1PA15 LINE L1 -78 6087 5905 236 286 24 12 chr18 2094266 2094350 -83894584 + L1ME LINE L1 5610 5694 -427 229 260 13 0 chr18 2094451 2094528 -83894406 + L1ME LINE L1 5838 5915 -206 239 302 256 0 chr18 2095599 2095685 -83893249 + L2 LINE L2 3140 3247 -25 1132 299 68 54 chr18 2096080 2096752 -83892182 - MER115 DNA AcHobo 0 693 12 692 217 64 27 chr18 2097495 2098045 -83890889 - L1ME3A LINE L1 0 6170 5541 223 387 67 8 chr18 2098557 2098676 -83890258 + L2 LINE L2 3142 3267 -5 198 188 0 42 chr18 2098688 2098736 -83890198 - MIR SINE MIR -106 156 111 234 286 253 0 chr18 2098831 2098922 -83890012 + L3 LINE CR1 1291 1404 -173 393 331 120 6 chr18 2099188 2099363 -83889571 - L2 LINE L2 -226 3046 2852 708 168 23 15 chr18 2099706 2099837 -83889097 + FLAM_C SINE Alu 1 132 -1 311 213 12 134 chr18 2103961 2104125 -83884809 + L1MC4 LINE L1 7711 7854 -188 21 0 0 0 chr18 2104574 2104595 -83884339 + AT_rich Low_complexity Low_complexity 1 21 0 260 227 27 7 chr18 2104750 2104900 -83884034 + (CAGAGA)n Simple_repeat Simple_repeat 4 156 0 339 276 92 0 chr18 2105155 2105253 -83883681 - MIR3 SINE MIR -53 155 49 492 306 65 12 chr18 2105307 2105477 -83883457 - MER5A DNA MER1_type -10 179 1 345 280 47 19 chr18 2106129 2106280 -83882654 + MLT1J LTR MaLR 64 213 -237 1349 173 31 4 chr18 2106803 2107029 -83881905 - AluJb SINE Alu -17 295 64 230 244 117 56 chr18 2110211 2110391 -83878543 + L1P1 LINE L1 5354 5544 -611 294 220 99 103 chr18 2110435 2110667 -83878267 - MLT1J1 LTR MaLR -15 431 201 434 230 51 88 chr18 2110881 2111098 -83877836 + L1ME LINE L1 5597 5805 -316 474 351 46 43 chr18 2111571 2111896 -83877038 - L2 LINE L2 -10 3262 2937 214 314 43 0 chr18 2111950 2112020 -83876914 + MIR SINE MIR 184 256 -6 555 187 172 0 chr18 2112065 2112199 -83876735 - MER69A DNA AcHobo 0 177 21 437 232 92 49 chr18 2112280 2112444 -83876490 + LTR16A LTR ERVL 16 186 -264 2649 321 49 28 chr18 2112445 2113959 -83874975 + ERVL LTR ERVL 1957 3520 -1913 3578 332 44 30 chr18 2113998 2115894 -83873040 + ERVL LTR ERVL 3145 5383 -381 2571 134 38 35 chr18 2116003 2116187 -83872747 + MSTB LTR MaLR 1 183 -243 2470 77 0 0 chr18 2116187 2116486 -83872448 + AluY SINE Alu 1 299 -12 2571 134 38 35 chr18 2116486 2116726 -83872208 + MSTB LTR MaLR 183 426 0 1470 262 42 14 chr18 2116743 2117175 -83871759 + LTR16A LTR ERVL 1 444 -6 192 269 164 77 chr18 2118211 2118315 -83870619 + MIR SINE MIR 34 146 -62 1015 295 74 62 chr18 2118568 2118848 -83870086 + L2 LINE L2 2248 2523 -749 2105 146 0 0 chr18 2118848 2119150 -83869784 - AluSx SINE Alu -10 302 1 1015 295 74 62 chr18 2119150 2119900 -83869034 + L2 LINE L2 2523 3271 -1 195 306 198 25 chr18 2121417 2121538 -83867396 + L2 LINE L2 3127 3268 -4 28 29 0 0 chr18 2121574 2121609 -83867325 + AT_rich Low_complexity Low_complexity 1 35 0 1584 111 39 79 chr18 2121899 2122036 -83866898 - L1PA13 LINE L1 -7 6156 6034 2356 106 0 0 chr18 2122036 2122348 -83866586 - AluSx SINE Alu 0 312 1 1584 111 39 79 chr18 2122348 2122490 -83866444 - L1PA13 LINE L1 -129 6034 5888 231 211 10 135 chr18 2122505 2122609 -83866325 - L1ME3A LINE L1 -112 6058 5968 1657 126 95 18 chr18 2122844 2123129 -83865805 - AluJb SINE Alu -5 307 1 247 271 75 53 chr18 2123805 2123913 -83865021 + L3 LINE CR1 444 557 -1020 192 97 0 0 chr18 2123913 2123944 -83864990 + (TAGA)n Simple_repeat Simple_repeat 3 33 0 247 271 75 53 chr18 2123944 2123968 -83864966 + L3 LINE CR1 557 579 -998 1185 254 121 34 chr18 2124135 2124548 -83864386 + MLT1L LTR MaLR 127 575 -40 330 359 86 20 chr18 2124705 2124950 -83863984 + L3 LINE CR1 1018 1278 -299 337 287 155 55 chr18 2125049 2125095 -83863839 + L2 LINE L2 2517 2557 -757 2650 39 0 13 chr18 2125095 2125405 -83863529 - AluY SINE Alu -5 306 1 337 287 155 55 chr18 2125405 2125668 -83863266 + L2 LINE L2 2557 2857 -457 465 219 67 0 chr18 2126513 2126618 -83862316 + MLT1L LTR MaLR 352 463 -152 329 236 14 14 chr18 2127142 2127214 -83861720 + L2 LINE L2 3200 3271 -1 4163 166 33 48 chr18 2127235 2128075 -83860859 + L1MB7 LINE L1 5328 6155 -29 253 324 80 45 chr18 2128142 2128318 -83860616 + L3 LINE CR1 1349 1530 -47 199 318 0 15 chr18 2128863 2128929 -83860005 + L2 LINE L2 3234 3298 -15 2552 169 35 22 chr18 2128971 2129432 -83859502 + MLT1C LTR MaLR 1 467 0 817 129 0 24 chr18 2130354 2130478 -83858456 + AluJo SINE Alu 14 134 -178 331 296 41 0 chr18 2130666 2130764 -83858170 - L2 LINE L2 -25 3247 3146 * 496 306 32 13 chr18 2130753 2130910 -83858024 + MIR SINE MIR 8 167 -95 1202 35 49 0 chr18 2131096 2131239 -83857695 - L1PA5 LINE L1 -1 6153 6004 2209 108 3 0 chr18 2131361 2131648 -83857286 + AluSg SINE Alu 1 288 -22 519 56 0 0 chr18 2131648 2131719 -83857215 + (TA)n Simple_repeat Simple_repeat 2 72 0 1013 174 16 21 chr18 2132493 2132683 -83856251 + MER41E LTR ERV1 1 189 -323 2051 135 0 3 chr18 2132684 2132996 -83855938 + L1PA16 LINE L1 5595 5905 -261 2143 131 38 17 chr18 2133007 2133028 -83855906 + MER41E LTR ERV1 162 181 -331 2397 132 132 5 chr18 2133028 2133408 -83855526 + MSTA LTR MaLR 1 428 0 2143 131 38 17 chr18 2133408 2133730 -83855204 + MER41E LTR ERV1 181 512 0 2585 128 8 0 chr18 2134442 2134809 -83854125 - L1PB1 LINE L1 -1 6866 6497 232 186 14 14 chr18 2134809 2134879 -83854055 + (TA)n Simple_repeat Simple_repeat 2 71 0 186 133 0 0 chr18 2134913 2134943 -83853991 + (TA)n Simple_repeat Simple_repeat 1 30 0 15215 187 44 7 chr18 2134944 2136284 -83852650 - L1PB1 LINE L1 -361 6506 5217 207 0 0 0 chr18 2136284 2136307 -83852627 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 15215 187 44 7 chr18 2136307 2141083 -83847851 - L1PB1 LINE L1 -1650 5217 6 29 0 0 0 chr18 2141228 2141257 -83847677 + AT_rich Low_complexity Low_complexity 1 29 0 907 216 28 18 chr18 2141271 2141489 -83847445 + L1ME3 LINE L1 5841 6060 -102 200 100 25 0 chr18 2141521 2141561 -83847373 + (TAGA)n Simple_repeat Simple_repeat 1 41 0 330 221 93 0 chr18 2142904 2142990 -83845944 - MER76 LTR ERV 0 688 595 3976 139 12 47 chr18 2143009 2143693 -83845241 + L1PA16 LINE L1 5506 6165 -1 2542 193 86 11 chr18 2143702 2144272 -83844662 - MER76 LTR ERV -74 614 2 201 39 0 0 chr18 2144369 2144395 -83844539 + (TG)n Simple_repeat Simple_repeat 2 27 0 332 243 0 87 chr18 2144474 2144659 -83844275 + L1 LINE L1 3092 3260 -2886 * 7159 130 39 22 chr18 2144639 2149820 -83839114 + L1PA7 LINE L1 11 6143 -6 7159 48 43 0 chr18 2149820 2150678 -83838256 + L1PA7 LINE L1 5254 6148 -6 2244 109 0 3 chr18 2150698 2151002 -83837932 + AluSx SINE Alu 1 303 -9 7927 61 1 0 chr18 2152006 2153016 -83835918 - L1P LINE L1 -4232 1914 904 5493 173 11 13 chr18 2153126 2154212 -83834722 + L1 LINE L1 4320 5403 -743 640 236 204 39 chr18 2154548 2154828 -83834106 - MLT1I LTR MaLR -2 407 82 206 299 41 62 chr18 2155130 2155227 -83833707 + MIR SINE MIR 20 114 -94 345 185 0 15 chr18 2156711 2156776 -83832158 - MER20 DNA MER1_type -24 195 132 245 208 0 21 chr18 2157425 2157473 -83831461 + MER20 DNA MER1_type 1 47 -172 2393 83 0 3 chr18 2157515 2157815 -83831119 - AluSx SINE Alu -13 299 1 205 353 121 0 chr18 2158265 2158381 -83830553 - MIR SINE MIR -21 241 112 2218 101 3 3 chr18 2159894 2160191 -83828743 - AluSq SINE Alu -16 297 1 191 253 131 71 chr18 2160192 2160291 -83828643 + L2 LINE L2 3158 3262 -10 763 285 30 17 chr18 2160451 2160686 -83828248 + MIR SINE MIR 15 252 -10 22 56 0 0 chr18 2160958 2160994 -83827940 + AT_rich Low_complexity Low_complexity 1 36 0 257 258 199 66 chr18 2161294 2161550 -83827384 + MLT1K LTR MaLR 200 489 -99 202 298 0 0 chr18 2161597 2161654 -83827280 - MIR SINE MIR -5 257 201 265 264 161 0 chr18 2162738 2162825 -83826109 - MIR SINE MIR -113 149 49 1024 211 4 29 chr18 2162893 2163135 -83825799 + AluJo SINE Alu 64 299 -13 343 265 25 6 chr18 2164396 2164558 -83824376 + (TA)n Simple_repeat Simple_repeat 2 166 0 26 0 0 0 chr18 2164617 2164643 -83824291 + AT_rich Low_complexity Low_complexity 1 26 0 329 141 0 62 chr18 2164858 2164922 -83824012 - MER103 DNA DNA -105 61 2 366 74 0 0 chr18 2165976 2166030 -83822904 + (CA)n Simple_repeat Simple_repeat 1 54 0 2541 82 0 0 chr18 2166088 2166393 -83822541 + AluSx SINE Alu 1 305 -7 440 361 35 13 chr18 2167281 2167511 -83821423 + MIR SINE MIR 23 257 -5 560 225 78 65 chr18 2168171 2168402 -83820532 - MER112 DNA MER1_type -9 251 18 307 268 169 35 chr18 2168642 2168784 -83820150 + MIR SINE MIR 40 200 -62 1616 202 6 19 chr18 2168814 2169126 -83819808 + AluJo SINE Alu 5 312 0 183 193 123 18 chr18 2169135 2169192 -83819742 + MIR SINE MIR 179 241 -21 22 0 0 0 chr18 2169655 2169677 -83819257 + AT_rich Low_complexity Low_complexity 1 22 0 1463 96 25 0 chr18 2169926 2170123 -83818811 + AluSg/x SINE Alu 87 288 -24 587 266 30 49 chr18 2170194 2170397 -83818537 + MER21B LTR ERV1 500 698 -165 1711 174 7 14 chr18 2170448 2170741 -83818193 + AluJo SINE Alu 1 291 -21 1469 132 64 41 chr18 2170768 2171034 -83817900 + THE1B LTR MaLR 1 272 -92 2282 110 0 0 chr18 2171066 2171366 -83817568 - AluSg SINE Alu -9 301 2 1403 180 78 17 chr18 2172393 2172580 -83816354 - AluJo SINE Alu 0 312 99 195 42 0 0 chr18 2172580 2172604 -83816330 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1403 180 78 17 chr18 2172604 2172710 -83816224 - AluJo SINE Alu -213 99 1 487 279 73 25 chr18 2172947 2173151 -83815783 - MIR SINE MIR -48 214 1 2388 88 0 0 chr18 2173177 2173473 -83815461 - AluSc SINE Alu -13 296 1 32 0 0 0 chr18 2173824 2173856 -83815078 + AT_rich Low_complexity Low_complexity 1 32 0 2702 32 0 3 chr18 2173898 2174208 -83814726 + AluY SINE Alu 1 309 -2 236 71 0 0 chr18 2174220 2174248 -83814686 + Alu SINE Alu 64 91 -211 26 30 0 0 chr18 2174254 2174287 -83814647 + AT_rich Low_complexity Low_complexity 1 33 0 456 289 35 40 chr18 2174480 2174708 -83814226 - MIR SINE MIR -6 256 30 410 277 200 50 chr18 2174913 2175538 -83813396 + L1ME4a LINE L1 4679 5397 -749 487 258 82 94 chr18 2175775 2176190 -83812744 + L1ME4a LINE L1 5524 5933 -188 473 69 0 0 chr18 2177171 2177243 -83811691 - AluSp/q SINE Alu -2 311 240 2151 129 0 0 chr18 2177313 2177622 -83811312 - AluSc SINE Alu 0 309 1 2442 74 7 0 chr18 2177643 2177941 -83810993 + AluSp SINE Alu 1 300 -13 266 311 0 0 chr18 2177968 2178058 -83810876 - L2 LINE L2 -1 3271 3182 355 228 25 0 chr18 2178129 2178208 -83810726 - MER91A DNA MER1_type -101 95 15 442 271 42 42 chr18 2178343 2178535 -83810399 - L2 LINE L2 -247 3066 2875 1565 181 41 117 chr18 2178535 2178894 -83810040 - LTR2 LTR ERV1 0 449 129 261 0 0 0 chr18 2178894 2178923 -83810011 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1565 181 41 117 chr18 2178923 2179006 -83809928 - LTR2 LTR ERV1 -320 129 41 508 294 87 9 chr18 2179375 2179606 -83809328 + MIR SINE MIR 2 250 -12 506 198 0 0 chr18 2179753 2179839 -83809095 + AluJ/FLAM SINE Alu 2 87 -225 1101 188 4 60 chr18 2179841 2180075 -83808859 - AluJo SINE Alu -91 221 1 2207 101 72 26 chr18 2181197 2181545 -83807389 + THE1B LTR MaLR 1 364 0 1996 121 39 26 chr18 2181801 2182108 -83806826 + AluSx SINE Alu 1 311 -1 391 300 46 0 chr18 2182616 2182746 -83806188 - MIR SINE MIR -17 245 110 834 11 0 0 chr18 2182862 2182953 -83805981 - L1P1 LINE L1 -544 5611 5521 * 4586 17 2 22 chr18 2182951 2183114 -83805820 + L1HS LINE L1 5623 5788 -367 2903 7 0 0 chr18 2183114 2183421 -83805513 + AluYb8 SINE Alu 1 307 -11 4586 17 2 22 chr18 2183421 2183800 -83805134 + L1HS LINE L1 5788 6154 -1 2028 143 10 0 chr18 2183818 2184125 -83804809 + AluSq SINE Alu 1 310 -3 220 297 0 14 chr18 2184516 2184590 -83804344 + MER5B DNA MER1_type 74 146 -32 1982 131 31 7 chr18 2184591 2184881 -83804053 - AluSx SINE Alu -15 297 1 1324 36 0 12 chr18 2184896 2185062 -83803872 - L1PA2 LINE L1 0 6155 5992 194 279 0 0 chr18 2185065 2185108 -83803826 - MER5B DNA MER1_type 0 178 136 1678 177 38 0 chr18 2185108 2185396 -83803538 + AluJb SINE Alu 1 299 -13 347 139 97 0 chr18 2185411 2185483 -83803451 + L1MB2 LINE L1 5880 5958 -213 5028 146 23 50 chr18 2185484 2185528 -83803406 + MER49 LTR ERV1 35 79 -844 2203 106 7 0 chr18 2185528 2185820 -83803114 - AluSq SINE Alu -14 299 6 5028 146 23 50 chr18 2185820 2186646 -83802288 + MER49 LTR ERV1 79 881 -42 1807 151 26 22 chr18 2186646 2186957 -83801977 - AluJo SINE Alu 0 312 1 5028 146 23 50 chr18 2186957 2186997 -83801937 + MER49 LTR ERV1 881 921 -2 338 295 113 30 chr18 2187017 2187359 -83801575 + L2 LINE L2 2068 3023 -249 305 200 0 0 chr18 2187413 2187473 -83801461 - L1MC4 LINE L1 -2089 5953 5894 2334 101 0 7 chr18 2187473 2187780 -83801154 + AluSx SINE Alu 1 305 -7 1107 195 23 23 chr18 2187780 2187995 -83800939 + MER44D DNA MER2_type 87 301 -404 1382 162 11 38 chr18 2188393 2188658 -83800276 + MER44D DNA MER2_type 293 605 0 2302 89 0 0 chr18 2188770 2189073 -83799861 - MER4E LTR ERV1 0 766 464 2222 104 0 0 chr18 2189075 2189376 -83799558 + AluSg SINE Alu 1 301 0 1481 163 105 0 chr18 2190605 2190862 -83798072 - AluJb SINE Alu -28 284 1 319 229 10 52 chr18 2190911 2191007 -83797927 + MIR SINE MIR 107 198 -64 1949 119 3 20 chr18 2191331 2191633 -83797301 + AluSp SINE Alu 1 297 -16 212 0 36 0 chr18 2191633 2191661 -83797273 + (TA)n Simple_repeat Simple_repeat 1 29 0 722 162 36 0 chr18 2191827 2191994 -83796940 + GA-rich Low_complexity Low_complexity 4 176 0 824 194 41 25 chr18 2192036 2192232 -83796702 + MLT2B1 LTR ERVL 308 506 -14 2392 90 0 0 chr18 2192340 2192629 -83796305 + AluSg SINE Alu 1 289 -21 189 0 0 0 chr18 2192707 2192728 -83796206 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 256 294 28 92 chr18 2192728 2192837 -83796097 - L2 LINE L2 -13 3259 3158 2080 136 7 0 chr18 2193654 2193948 -83794986 - AluSx SINE Alu -16 296 1 21 36 0 0 chr18 2194127 2194155 -83794779 + AT_rich Low_complexity Low_complexity 1 28 0 1558 164 23 59 chr18 2194896 2195201 -83793733 - AluJo SINE Alu -18 294 1 2214 107 7 0 chr18 2195678 2195969 -83792965 - AluSx SINE Alu -18 294 2 2108 88 12 73 chr18 2196276 2196606 -83792328 - AluSx SINE Alu -2 310 1 231 36 0 0 chr18 2196815 2196843 -83792091 + (T)n Simple_repeat Simple_repeat 1 28 0 2237 133 0 0 chr18 2197270 2197578 -83791356 - AluSg SINE Alu -2 308 1 959 123 0 22 chr18 2197806 2197944 -83790990 + AluJo SINE Alu 1 135 -177 2177 105 3 3 chr18 2198267 2198553 -83790381 + AluSq SINE Alu 1 286 -27 816 234 26 5 chr18 2199207 2199399 -83789535 + MLT1E1 LTR MaLR 1 196 -458 2091 135 0 0 chr18 2199433 2199722 -83789212 - AluSq SINE Alu -24 289 1 369 0 0 0 chr18 2199727 2199768 -83789166 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1378 205 40 91 chr18 2200658 2201078 -83787856 + MLT1E1 LTR MaLR 178 576 -78 252 221 59 0 chr18 2201078 2201146 -83787788 - L1M4 LINE L1 -1609 4537 4466 245 286 108 53 chr18 2201163 2201275 -83787659 - HAL1b LINE L1 -621 727 623 1459 140 4 60 chr18 2201275 2201378 -83787556 - AluSx SINE Alu -76 236 129 1950 98 30 4 chr18 2201378 2201643 -83787291 - AluSc SINE Alu -20 289 18 1459 140 4 60 chr18 2201643 2201789 -83787145 - AluSx SINE Alu -183 129 1 245 286 108 53 chr18 2201789 2202018 -83786916 - HAL1b LINE L1 -725 623 367 1495 97 0 0 chr18 2202662 2202848 -83786086 + AluSx SINE Alu 1 186 -126 478 69 0 0 chr18 2202852 2202910 -83786024 + AluSx SINE Alu 234 291 -21 508 258 15 0 chr18 2202973 2203105 -83785829 + LTR16C LTR ERVL 358 491 0 477 236 32 8 chr18 2203110 2203233 -83785701 + MER69 DNA AcHobo 6 131 -2395 335 198 25 25 chr18 2203241 2203322 -83785612 + MER69 DNA AcHobo 2446 2526 0 465 269 66 12 chr18 2203323 2203490 -83785444 + L2 LINE L2 3133 3308 -5 2127 114 0 0 chr18 2203812 2204092 -83784842 + AluSg SINE Alu 1 303 0 208 0 0 0 chr18 2204092 2204115 -83784819 + (TAAA)n Simple_repeat Simple_repeat 2 156 0 21 71 0 0 chr18 2204191 2204233 -83784701 + AT_rich Low_complexity Low_complexity 1 42 0 334 209 91 27 chr18 2204306 2204513 -83784421 - MLT1H LTR MaLR -168 374 152 2506 184 99 52 chr18 2204519 2204892 -83784042 - L1MB7 LINE L1 -14 6170 5816 2188 104 3 7 chr18 2204892 2205216 -83783718 - AluSp SINE Alu 0 313 1 2506 184 99 52 chr18 2205216 2205301 -83783633 - L1MB7 LINE L1 -368 5816 5736 1906 131 3 24 chr18 2205301 2205613 -83783321 + AluSx SINE Alu 1 306 0 2506 184 99 52 chr18 2205613 2205789 -83783145 - L1MB7 LINE L1 -448 5736 5504 249 139 0 0 chr18 2205880 2205916 -83783018 + MADE1 DNA Mariner 5 40 -40 303 0 47 47 chr18 2205987 2206030 -83782904 - MADE1 DNA Mariner -39 41 5 376 281 25 0 chr18 2206033 2206154 -83782780 - L1MC5 LINE L1 -527 7434 7311 316 329 27 14 chr18 2206159 2206305 -83782629 - L1MC4a LINE L1 -462 7346 7199 837 152 0 0 chr18 2206425 2206550 -83782384 + FRAM SINE Alu 21 145 -31 27 0 0 0 chr18 2206550 2206577 -83782357 + AT_rich Low_complexity Low_complexity 1 27 0 2221 92 10 3 chr18 2206689 2206981 -83781953 + AluSq SINE Alu 1 294 -19 354 23 0 0 chr18 2207379 2207422 -83781512 + (CA)n Simple_repeat Simple_repeat 2 44 0 2422 80 0 0 chr18 2207443 2207731 -83781203 + AluSx SINE Alu 5 292 -20 326 346 164 5 chr18 2208192 2208400 -83780534 + MIR SINE MIR 10 250 -12 2184 108 0 3 chr18 2209144 2209432 -83779502 + AluSx SINE Alu 2 288 -24 1815 125 6 60 chr18 2209452 2209771 -83779163 + AluSq SINE Alu 1 302 -11 393 296 15 23 chr18 2209943 2210075 -83778859 - MER20B DNA MER1_type -652 131 1 239 350 20 10 chr18 2210450 2210554 -83778380 + MIR SINE MIR 102 207 -55 341 220 211 46 chr18 2210729 2210838 -83778096 - MER5A DNA MER1_type -16 173 47 199 319 142 0 chr18 2210883 2211024 -83777910 + MIR SINE MIR 75 235 -27 795 150 0 0 chr18 2211939 2212100 -83776834 + FLAM_C SINE Alu 2 162 0 2034 96 0 84 chr18 2212328 2212651 -83776283 + AluSx SINE Alu 1 296 -16 2753 17 0 0 chr18 2212814 2213113 -83775821 + AluY SINE Alu 1 299 -12 2140 49 4 0 chr18 2213406 2213653 -83775281 + L1PA5 LINE L1 5899 6146 -8 228 67 0 0 chr18 2213819 2213849 -83775085 + (T)n Simple_repeat Simple_repeat 1 30 0 2480 90 0 0 chr18 2213974 2214284 -83774650 - AluSx SINE Alu -2 310 1 225 59 0 0 chr18 2214412 2214446 -83774488 - L1ME3 LINE L1 0 6162 6129 583 289 51 25 chr18 2214448 2214645 -83774289 + MIR SINE MIR 41 242 -20 755 248 135 9 chr18 2214748 2214978 -83773956 + MER112 DNA MER1_type 1 259 -1 256 296 0 83 chr18 2214981 2215089 -83773845 - MIR SINE MIR -56 152 54 868 134 92 0 chr18 2215099 2215241 -83773693 - L1MB7 LINE L1 -18 6166 6012 2135 125 0 0 chr18 2216223 2216512 -83772422 - AluSx SINE Alu -16 296 8 892 133 0 0 chr18 2216513 2216648 -83772286 - AluJb SINE Alu -177 135 1 2110 117 0 4 chr18 2216773 2217054 -83771880 - AluSg SINE Alu -30 280 1 2239 97 7 0 chr18 2217084 2217384 -83771550 + AluSp SINE Alu 2 303 -10 2327 84 0 13 chr18 2217537 2217835 -83771099 + AluY SINE Alu 1 294 -17 419 242 201 0 chr18 2218497 2218646 -83770288 + MIR SINE MIR 70 248 -14 2251 104 3 3 chr18 2218878 2219185 -83769749 - AluSx SINE Alu -5 307 1 275 186 93 106 chr18 2219738 2219899 -83769035 + MER117 DNA MER1_type 1 159 -38 305 236 146 0 chr18 2220143 2220266 -83768668 - LTR67 LTR ERVL -6 551 411 2083 107 3 28 chr18 2221077 2221400 -83767534 - AluSx SINE Alu 0 316 1 25 0 0 0 chr18 2222272 2222297 -83766637 + AT_rich Low_complexity Low_complexity 1 25 0 26 0 0 0 chr18 2222571 2222597 -83766337 + AT_rich Low_complexity Low_complexity 1 26 0 764 155 9 0 chr18 2222602 2222718 -83766216 - AluJb SINE Alu -194 118 2 231 36 0 0 chr18 2224094 2224122 -83764812 + (A)n Simple_repeat Simple_repeat 1 28 0 2050 91 6 70 chr18 2224331 2224662 -83764272 + AluSx SINE Alu 1 310 -2 709 164 43 27 chr18 2224937 2224969 -83763965 + L1MB4 LINE L1 5782 5812 -368 2313 95 7 0 chr18 2224969 2225264 -83763670 + AluSq SINE Alu 2 298 -15 709 164 43 27 chr18 2225264 2225445 -83763489 + L1MB4 LINE L1 5812 6108 -72 413 179 57 57 chr18 2225461 2225567 -83763367 + MER74A LTR ERVL 453 558 0 2219 115 0 7 chr18 2226213 2226509 -83762425 + AluSx SINE Alu 1 294 -18 871 174 2 7 chr18 2226836 2227001 -83761933 + L1MD2 LINE L1 5659 5824 -356 855 126 8 0 chr18 2227001 2227120 -83761814 + FLAM_C SINE Alu 1 120 -23 180 0 0 0 chr18 2227120 2227140 -83761794 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1672 178 16 29 chr18 2227140 2227646 -83761288 + L1MA9 LINE L1 5817 6306 -6 269 314 177 0 chr18 2227773 2227897 -83761037 + MIR3 SINE MIR 48 193 -15 1999 116 14 14 chr18 2228043 2228337 -83760597 + AluSx SINE Alu 1 294 -18 1108 140 0 6 chr18 2228899 2229070 -83759864 - AluJb SINE Alu -13 299 130 2212 118 0 0 chr18 2229089 2229386 -83759548 + AluSx SINE Alu 1 297 -15 1633 158 4 0 chr18 2229386 2229640 -83759294 + AluSx SINE Alu 58 312 0 1866 153 0 7 chr18 2230556 2230851 -83758083 - AluSx SINE Alu -19 293 1 2004 127 0 23 chr18 2231599 2231906 -83757028 + AluSx SINE Alu 1 300 -12 28 48 0 0 chr18 2232820 2232862 -83756072 + AT_rich Low_complexity Low_complexity 1 42 0 274 153 5 5 chr18 2233628 2233811 -83755123 + AluJo SINE Alu 1 282 -20 209 182 0 0 chr18 2233814 2233847 -83755087 + (CA)n Simple_repeat Simple_repeat 2 34 0 1539 170 8 0 chr18 2234225 2234478 -83754456 + AluJo SINE Alu 1 255 -57 2019 123 7 3 chr18 2236899 2237191 -83751743 + AluSx SINE Alu 1 293 -19 1655 171 19 50 chr18 2238971 2239150 -83749784 - AluJb SINE Alu 0 312 146 1658 98 9 0 chr18 2239150 2239364 -83749570 - AluSg/x SINE Alu -12 300 85 1655 171 19 50 chr18 2239364 2239506 -83749428 - AluJb SINE Alu -166 146 1 323 325 18 61 chr18 2240843 2241006 -83747928 + MIR3 SINE MIR 30 185 -23 1686 165 67 9 chr18 2241087 2241402 -83747532 + Tigger3(Golem) DNA MER2_type 2696 3028 -1 2169 117 0 3 chr18 2241561 2241869 -83747065 - AluSx SINE Alu -5 307 1 2358 92 0 7 chr18 2241869 2242174 -83746760 - AluSx SINE Alu -9 303 1 1484 197 3 26 chr18 2243249 2243554 -83745380 - AluJb SINE Alu -14 298 1 851 140 7 28 chr18 2243556 2243699 -83745235 - FLAM_C SINE Alu -3 140 1 401 202 219 0 chr18 2243699 2243818 -83745116 - MIR SINE MIR -92 170 26 1951 98 91 4 chr18 2243938 2244212 -83744722 - AluSp SINE Alu -14 299 2 814 157 85 20 chr18 2244227 2244380 -83744554 - FRAM SINE Alu -10 166 4 1252 168 141 38 chr18 2245159 2245320 -83743614 - AluJb SINE Alu -13 289 146 2399 89 0 10 chr18 2245320 2245633 -83743301 - AluSg SINE Alu 0 310 1 1252 168 141 38 chr18 2245633 2245733 -83743201 - AluJb SINE Alu -156 146 1 407 209 113 26 chr18 2246122 2246237 -83742697 + L2 LINE L2 3188 3312 -1 1006 155 92 0 chr18 2246584 2246758 -83742176 - AluSg/x SINE Alu 0 312 123 21 0 0 0 chr18 2246767 2246788 -83742146 + AT_rich Low_complexity Low_complexity 1 21 0 2004 120 25 0 chr18 2246788 2247071 -83741863 - AluSx SINE Alu -22 290 1 234 342 0 0 chr18 2247096 2247175 -83741759 - MLT1I LTR MaLR -258 151 73 1004 110 117 0 chr18 2248365 2248510 -83740424 + U1 snRNA snRNA 3 164 -1 23 33 0 0 chr18 2248543 2248573 -83740361 + AT_rich Low_complexity Low_complexity 1 30 0 215 329 169 27 chr18 2248601 2248820 -83740114 + L3 LINE CR1 35 284 -1293 192 286 250 24 chr18 2248844 2249012 -83739922 + L3 LINE CR1 1367 1572 -5 311 244 28 61 chr18 2249207 2249418 -83739516 - L1M LINE L1 -757 5389 5208 1968 120 41 0 chr18 2249720 2250011 -83738923 - AluSg SINE Alu -7 303 1 481 309 116 13 chr18 2250070 2250303 -83738631 - MIR SINE MIR 0 262 6 297 0 0 0 chr18 2250553 2250586 -83738348 + (TG)n Simple_repeat Simple_repeat 2 34 0 3548 49 4 7 chr18 2250586 2251037 -83737897 - L1PA8 LINE L1 -21 6151 5702 1251 238 16 23 chr18 2251038 2251345 -83737589 - L1MC4 LINE L1 -2 8040 7736 362 203 152 0 chr18 2251345 2251424 -83737510 + MLT1C LTR MaLR 2 92 -375 1890 111 7 4 chr18 2251424 2251695 -83737239 + AluSc SINE Alu 37 308 -1 877 226 81 8 chr18 2251706 2251954 -83736980 + MLT1C LTR MaLR 192 457 -10 1694 242 78 31 chr18 2252003 2252762 -83736172 - L1MC4 LINE L1 -179 7723 6883 1533 190 0 15 chr18 2252863 2253137 -83735797 + AluJo SINE Alu 1 270 -42 1133 62 7 1 chr18 2253156 2253167 -83735767 + L1HS LINE L1 5767 5776 -379 2859 7 0 0 chr18 2253167 2253473 -83735461 + AluYb8 SINE Alu 1 306 -12 1133 62 7 1 chr18 2253473 2253612 -83735322 + L1HS LINE L1 5776 5916 -239 284 283 21 19 chr18 2253902 2254014 -83734920 + MIR SINE MIR 9 124 -84 275 272 97 29 chr18 2254508 2254693 -83734241 + LTR16A1 LTR ERVL 299 457 0 1188 188 112 12 chr18 2255150 2255400 -83733534 - AluJo SINE Alu -11 301 27 1205 158 5 51 chr18 2255536 2255751 -83733183 + AluJo SINE Alu 87 291 -21 271 295 9 9 chr18 2255950 2256055 -83732879 + (TA)n Simple_repeat Simple_repeat 2 106 0 24 0 0 0 chr18 2256058 2256082 -83732852 + AT_rich Low_complexity Low_complexity 1 24 0 1968 163 0 3 chr18 2256193 2256500 -83732434 + AluSx SINE Alu 1 306 -6 562 190 26 0 chr18 2256500 2256616 -83732318 - MER7A DNA MER2_type -227 119 3 186 43 0 0 chr18 2256634 2256657 -83732277 + (GA)n Simple_repeat Simple_repeat 2 24 0 1389 205 142 25 chr18 2256667 2257062 -83731872 - MLT2B2 LTR ERVL -74 441 1 2389 85 0 0 chr18 2257062 2257357 -83731577 + AluY SINE Alu 1 295 -16 357 249 133 0 chr18 2257435 2257625 -83731309 - ERVL-C1 LTR ERVL -5423 249 1 183 156 0 0 chr18 2257693 2257725 -83731209 + (CATA)n Simple_repeat Simple_repeat 3 34 0 1576 171 45 22 chr18 2257726 2258082 -83730852 - MLT2C1 LTR ERVL -20 377 14 32 26 0 0 chr18 2258207 2258246 -83730688 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr18 2258283 2258306 -83730628 + AT_rich Low_complexity Low_complexity 1 23 0 1729 156 12 41 chr18 2259081 2259401 -83729533 - AluJb SINE Alu 0 312 2 405 263 150 23 chr18 2260303 2260436 -83728498 + MIR SINE MIR 46 195 -67 10345 80 19 25 chr18 2260578 2262121 -83726813 + MER41A-int LTR ERV1 4411 5944 -2 3287 70 29 0 chr18 2262121 2262577 -83726357 + MER41A LTR ERV1 1 469 -85 2380 78 7 3 chr18 2262626 2262920 -83726014 - AluSq SINE Alu -18 295 1 21 0 0 0 chr18 2263136 2263157 -83725777 + AT_rich Low_complexity Low_complexity 1 21 0 1800 120 38 0 chr18 2263157 2263449 -83725485 - L1PA16 LINE L1 -9 6157 5855 377 293 23 30 chr18 2264054 2264187 -83724747 - MIR3 SINE MIR -25 183 52 2346 72 3 16 chr18 2264470 2264777 -83724157 - AluY SINE Alu -8 303 1 1934 61 4 0 chr18 2265252 2265499 -83723435 - L1PA5 LINE L1 -8 6146 5899 2334 76 7 10 chr18 2265791 2266093 -83722841 - AluSx SINE Alu -11 301 1 2198 122 0 0 chr18 2266123 2266418 -83722516 + AluSx SINE Alu 1 295 -17 29 28 0 0 chr18 2267146 2267182 -83721752 + AT_rich Low_complexity Low_complexity 1 36 0 1905 148 0 24 chr18 2267336 2267633 -83721301 + AluSx SINE Alu 6 295 -17 1872 170 0 19 chr18 2267999 2268310 -83720624 + AluJo SINE Alu 6 310 -2 1968 142 16 3 chr18 2268472 2268781 -83720153 + AluSq SINE Alu 1 313 0 2203 113 0 0 chr18 2268788 2269072 -83719862 + AluSq SINE Alu 1 284 -29 304 291 109 49 chr18 2269208 2269493 -83719441 + L1M4 LINE L1 3213 3514 -2632 2244 112 16 0 chr18 2269662 2269965 -83718969 + AluSq SINE Alu 1 308 -5 36 0 0 0 chr18 2270096 2270132 -83718802 + GC_rich Low_complexity Low_complexity 1 36 0 180 0 0 0 chr18 2270132 2270152 -83718782 + (C)n Simple_repeat Simple_repeat 1 20 0 279 0 0 0 chr18 2270180 2270211 -83718723 + (A)n Simple_repeat Simple_repeat 1 31 0 543 232 136 6 chr18 2270278 2270455 -83718479 + MER82 DNA MER2_type 2 201 -452 237 216 20 0 chr18 2270696 2270747 -83718187 + MER82 DNA MER2_type 595 646 -7 393 22 0 0 chr18 2270754 2270800 -83718134 + (TG)n Simple_repeat Simple_repeat 1 46 0 1006 177 48 24 chr18 2271147 2271356 -83717578 - MSTD LTR MaLR -2 394 181 823 159 34 53 chr18 2271360 2271567 -83717367 - AluJo SINE Alu -31 281 79 873 141 19 0 chr18 2271580 2271736 -83717198 - MSTD LTR MaLR -237 159 1 1136 111 0 21 chr18 2272034 2272223 -83716711 + MER30B DNA MER1_type 1 185 -5 1804 199 42 58 chr18 2272341 2272848 -83716086 + MLT1D LTR MaLR 1 548 -1 624 227 12 49 chr18 2272879 2273042 -83715892 + MIR SINE MIR 59 215 -47 22 0 0 0 chr18 2273048 2273070 -83715864 + AT_rich Low_complexity Low_complexity 1 22 0 2211 118 10 0 chr18 2273387 2273692 -83715242 + AluSq SINE Alu 1 308 -5 198 0 0 0 chr18 2273889 2273911 -83715023 + (TG)n Simple_repeat Simple_repeat 2 23 0 706 159 16 8 chr18 2274064 2274190 -83714744 - FLAM_A SINE Alu -6 136 10 2394 93 3 3 chr18 2274352 2274665 -83714269 - AluSq SINE Alu 0 313 1 220 302 47 12 chr18 2274814 2274900 -83714034 - L2 LINE L2 -664 2650 2562 840 125 0 62 chr18 2275211 2275355 -83713579 - FLAM_C SINE Alu -2 141 7 210 37 0 0 chr18 2275358 2275385 -83713549 + (CTG)n Simple_repeat Simple_repeat 2 28 0 234 130 0 0 chr18 2275417 2275463 -83713471 - LTR66 LTR ERVL -171 439 394 276 30 0 0 chr18 2275479 2275512 -83713422 + (GA)n Simple_repeat Simple_repeat 2 34 0 735 200 86 0 chr18 2275513 2275653 -83713281 - FAM SINE Alu -33 152 1 24 0 0 0 chr18 2275656 2275680 -83713254 + AT_rich Low_complexity Low_complexity 1 24 0 1150 169 0 0 chr18 2275706 2275884 -83713050 - AluSg/x SINE Alu -1 309 132 528 45 0 0 chr18 2276024 2276090 -83712844 + MER33 DNA MER1_type 43 108 -216 1315 115 0 0 chr18 2276090 2276264 -83712670 - AluSx SINE Alu -136 176 3 715 125 130 65 chr18 2276269 2276485 -83712449 + MER33 DNA MER1_type 95 324 0 254 140 0 20 chr18 2276660 2276710 -83712224 + (TA)n Simple_repeat Simple_repeat 2 50 0 544 187 0 45 chr18 2276731 2277024 -83711910 + (TA)n Simple_repeat Simple_repeat 1 279 0 433 176 6 41 chr18 2277044 2277214 -83711720 + (CATATA)n Simple_repeat Simple_repeat 3 166 0 57 0 0 0 chr18 2277252 2277309 -83711625 + AT_rich Low_complexity Low_complexity 1 57 0 347 317 28 31 chr18 2277309 2277486 -83711448 - MIR SINE MIR -44 218 47 511 301 99 32 chr18 2277507 2277819 -83711115 + MLT1K LTR MaLR 69 401 -187 1405 142 5 0 chr18 2278075 2278299 -83710635 - AluJb SINE Alu 0 311 87 666 153 0 17 chr18 2278842 2278960 -83709974 - AluJb SINE Alu -7 305 190 200 436 32 20 chr18 2278972 2279222 -83709712 + L2 LINE L2 196 448 -2866 1154 200 39 73 chr18 2279450 2279828 -83709106 + L1ME LINE L1 5280 5648 -518 249 237 0 0 chr18 2279851 2279910 -83709024 + MER52A LTR ERV1 1 59 -1696 1633 209 32 77 chr18 2280256 2280841 -83708093 + MER52A LTR ERV1 211 769 -986 1122 208 31 51 chr18 2280982 2281338 -83707596 - L1ME1 LINE L1 -128 6038 5690 3844 159 102 53 chr18 2281343 2282249 -83706685 - MER52A LTR ERV1 -2 1753 804 710 330 79 16 chr18 2282433 2282873 -83706061 - L2 LINE L2 -206 3066 2597 507 158 2 0 chr18 2282907 2283009 -83705925 - L1PA15 LINE L1 -84 6079 5977 354 114 0 14 chr18 2282990 2283060 -83705874 + L1PA15 LINE L1 6074 6142 -23 * 2143 104 0 20 chr18 2284057 2284356 -83704578 - AluSc SINE Alu -16 293 1 711 191 16 16 chr18 2284376 2284565 -83704369 - L1ME1 LINE L1 -966 5180 4992 * 3588 189 50 20 chr18 2284562 2284689 -83704245 - L1MB4 LINE L1 0 6180 6058 697 212 18 59 chr18 2284689 2284859 -83704075 - FRAM SINE Alu -2 164 2 3588 189 50 20 chr18 2284859 2285000 -83703934 - L1MB4 LINE L1 -122 6058 5923 1923 176 14 24 chr18 2285000 2285369 -83703565 - MLT1A1 LTR MaLR 0 365 1 3588 189 50 20 chr18 2285369 2286252 -83702682 - L1MB4 LINE L1 -257 5923 4986 1386 229 81 104 chr18 2286245 2287098 -83701836 - L1MB4 LINE L1 -2286 3860 3028 * 258 299 287 0 chr18 2287552 2287719 -83701215 + MIR SINE MIR 38 252 -10 311 366 144 25 chr18 2287955 2288509 -83700425 - L3 LINE CR1 -487 1090 471 305 195 0 11 chr18 2289545 2289632 -83699302 + GA-rich Low_complexity Low_complexity 1 86 0 212 143 0 0 chr18 2290347 2290382 -83698552 + (GGAA)n Simple_repeat Simple_repeat 1 35 0 201 407 94 36 chr18 2290631 2290906 -83698028 - L2 LINE L2 -4 3268 2978 845 199 0 18 chr18 2292055 2292221 -83696713 + FRAM SINE Alu 1 161 -15 243 262 16 0 chr18 2292687 2292748 -83696186 + (AAGTG)n Simple_repeat Simple_repeat 4 65 0 1887 108 4 12 chr18 2293094 2293352 -83695582 - AluSx SINE Alu 0 312 57 208 327 46 42 chr18 2294119 2294266 -83694668 - MIR SINE MIR -66 142 18 4389 158 33 89 chr18 2294479 2295596 -83693338 - Tigger3b DNA MER2_type -174 1057 3 279 345 23 12 chr18 2295705 2295876 -83693058 - L1M4 LINE L1 -1908 4238 4066 837 276 119 7 chr18 2296026 2296446 -83692488 - L1ME LINE L1 -405 5757 5285 1017 195 54 49 chr18 2296472 2296778 -83692156 + MER61B LTR ERV1 1 394 -28 404 263 69 69 chr18 2296787 2297049 -83691885 - L1ME LINE L1 -886 5260 4999 1742 200 59 18 chr18 2297070 2297525 -83691409 - L1MC3 LINE L1 -30 7755 7282 1217 202 73 42 chr18 2297533 2297820 -83691114 + AluJo SINE Alu 1 296 -16 279 0 0 0 chr18 2297821 2297852 -83691082 + (CA)n Simple_repeat Simple_repeat 2 32 0 401 234 66 36 chr18 2297852 2297989 -83690945 - L1MC3 LINE L1 -681 7104 6964 2141 142 0 0 chr18 2297997 2298307 -83690627 - AluY SINE Alu -1 310 1 904 141 0 35 chr18 2298307 2298440 -83690494 - AluJb SINE Alu -182 130 1 6567 210 15 19 chr18 2298440 2298666 -83690268 - L1MC3 LINE L1 -365 5994 5769 526 88 0 25 chr18 2298666 2298746 -83690188 - MADE1 DNA Mariner 0 80 3 6567 210 15 19 chr18 2298746 2299561 -83689373 - L1MC3 LINE L1 -590 5769 4953 2128 119 22 40 chr18 2299561 2299932 -83689002 + THE1B LTR MaLR 1 364 0 6567 210 15 19 chr18 2299932 2300168 -83688766 - L1MC3 LINE L1 -1406 4953 5696 2059 102 39 7 chr18 2300168 2300451 -83688483 - AluSc SINE Alu -17 292 1 6567 210 15 19 chr18 2300451 2300811 -83688123 - L1MC3 LINE L1 -662 5697 5337 5077 161 39 11 chr18 2300823 2301783 -83687151 + L1MC3 LINE L1 4316 5317 -983 329 21 0 43 chr18 2301783 2301830 -83687104 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 5077 161 39 11 chr18 2301830 2302110 -83686824 + L1MA8 LINE L1 5317 5588 -712 1353 200 40 33 chr18 2302102 2302532 -83686402 + L1MA8 LINE L1 5858 6290 -1 * 1271 211 59 43 chr18 2302528 2302968 -83685966 - L1MB8 LINE L1 -53 6125 5679 * 280 197 103 54 chr18 2302971 2303194 -83685740 - L1M4b LINE L1 -3993 2964 2731 409 240 27 80 chr18 2303511 2303536 -83685398 - L1M4b LINE L1 -4598 2540 2515 207 0 0 0 chr18 2303536 2303559 -83685375 + (TTG)n Simple_repeat Simple_repeat 2 24 0 409 240 27 80 chr18 2303559 2303758 -83685176 - L1M4b LINE L1 -4623 2515 2328 2246 82 10 70 chr18 2303763 2304166 -83684768 + L1PB1 LINE L1 5602 5980 -171 * 4184 248 74 45 chr18 2304157 2304457 -83684477 - L1M4b LINE L1 -4890 1965 1675 1847 199 65 25 chr18 2304457 2304904 -83684030 + MLT1C LTR MaLR 3 467 0 4184 248 74 45 chr18 2304904 2306175 -83682759 - L1M4b LINE L1 -5180 1675 361 2785 22 0 0 chr18 2306175 2306486 -83682448 + AluY SINE Alu 1 311 0 4184 248 74 45 chr18 2306486 2306516 -83682418 - L1M4b LINE L1 -6494 361 333 2089 200 95 28 chr18 2306537 2307073 -83681861 + LTR49 LTR ERV1 1 572 -23 599 249 78 78 chr18 2307117 2307374 -83681560 - L1M4b LINE L1 -6591 268 12 718 232 40 86 chr18 2307383 2307571 -83681363 - L1M4 LINE L1 -1142 5004 4842 720 141 16 23 chr18 2307571 2307699 -83681235 - FLAM_C SINE Alu -6 127 1 718 232 40 86 chr18 2307699 2307907 -83681027 - L1M4 LINE L1 -1304 4842 4626 396 216 32 17 chr18 2308096 2308430 -83680504 + (TTA)n Simple_repeat Simple_repeat 1 338 0 207 0 0 0 chr18 2308468 2308491 -83680443 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 372 216 0 3 chr18 2308492 2308576 -83680358 - FLAM_A SINE Alu -34 99 33 524 296 32 53 chr18 2308603 2308981 -83679953 + L1MC/D LINE L1 3846 4215 -1931 649 258 88 38 chr18 2309173 2309413 -83679521 + L1MC/D LINE L1 5334 5585 -2223 1264 165 0 5 chr18 2309413 2309637 -83679297 - Tigger4(Zombi) DNA MER2_type 0 2731 2509 1202 151 38 14 chr18 2309662 2309874 -83679060 - Tigger4(Zombi) DNA MER2_type -2514 217 1 288 92 132 92 chr18 2309807 2309883 -83679051 + MER46A DNA MER2_type 75 153 -83 * 226 308 26 13 chr18 2309883 2309961 -83678973 + L1MC/D LINE L1 5593 5671 -2137 180 0 0 0 chr18 2312417 2312437 -83676497 + (TA)n Simple_repeat Simple_repeat 1 20 0 547 224 75 19 chr18 2314427 2314588 -83674346 + MLT1B LTR MaLR 1 170 -220 428 207 0 0 chr18 2315930 2316012 -83672922 - MLT2B2 LTR ERVL -433 82 1 290 314 78 75 chr18 2316780 2317127 -83671807 + LTR16B LTR ERVL 110 457 -7 300 313 123 12 chr18 2317359 2317522 -83671412 - L3 LINE CR1 -166 1411 1231 572 306 78 20 chr18 2317824 2318069 -83670865 - MIR SINE MIR -2 260 2 466 217 28 19 chr18 2318345 2318451 -83670483 + L2 LINE L2 3203 3309 -4 316 277 138 41 chr18 2318539 2318734 -83670200 - L3 LINE CR1 -733 844 631 2640 26 6 6 chr18 2318749 2319060 -83669874 - AluY SINE Alu 0 311 1 277 274 26 60 chr18 2319964 2320081 -83668853 + HAL1 LINE L1 316 428 -2079 1542 227 38 12 chr18 2320208 2320675 -83668259 - ERVL LTR ERVL -2345 3419 2855 207 0 0 0 chr18 2320675 2320698 -83668236 + (TG)n Simple_repeat Simple_repeat 2 24 0 1542 227 38 12 chr18 2320698 2320981 -83667953 - ERVL LTR ERVL -2909 2855 2581 929 204 11 6 chr18 2320999 2321180 -83667754 - MLT2C1 LTR ERVL -215 182 1 2356 231 64 25 chr18 2321389 2322317 -83666617 + L1MCb LINE L1 572 1552 -5006 468 0 0 0 chr18 2322317 2322369 -83666565 + (CA)n Simple_repeat Simple_repeat 2 53 0 2356 231 64 25 chr18 2322369 2322532 -83666402 + L1MCb LINE L1 1552 1707 -4851 221 340 28 57 chr18 2322536 2322677 -83666257 + L2 LINE L2 2946 3082 -231 4681 197 80 9 chr18 2322690 2323623 -83665311 + L1MA3 LINE L1 16 1015 -6550 5084 143 17 7 chr18 2323625 2325247 -83663687 + L1MA3 LINE L1 5810 7449 -275 23 0 0 0 chr18 2325321 2325344 -83663590 + AT_rich Low_complexity Low_complexity 1 23 0 1616 130 19 0 chr18 2325350 2325612 -83663322 + L1MA2 LINE L1 6034 6300 -4 309 291 31 0 chr18 2325690 2325817 -83663117 + L2 LINE L2 3115 3245 -68 308 283 0 19 chr18 2325924 2326030 -83662904 - MIR SINE MIR -1 261 158 562 304 87 27 chr18 2326542 2326841 -83662093 - LTR16A LTR ERVL -118 332 16 261 272 32 48 chr18 2327473 2327598 -83661336 + MIR SINE MIR 85 207 -55 215 328 38 0 chr18 2327751 2327834 -83661100 + MIR SINE MIR 95 149 -59 224 224 35 0 chr18 2327890 2327948 -83660986 + (CACCAT)n Simple_repeat Simple_repeat 2 61 0 27 73 0 0 chr18 2328011 2328066 -83660868 + AT_rich Low_complexity Low_complexity 1 55 0 395 78 0 178 chr18 2328445 2328535 -83660399 + MADE1 DNA Mariner 2 75 -5 264 59 0 0 chr18 2328535 2328569 -83660365 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 675 140 9 0 chr18 2328572 2328679 -83660255 + AluSp SINE Alu 1 108 -205 298 270 43 9 chr18 2329105 2329220 -83659714 + MER87 LTR ERV1 423 541 0 435 338 139 34 chr18 2329224 2329353 -83659581 + L2 LINE L2 1868 1982 -1332 2717 179 17 4 chr18 2329353 2329833 -83659101 + MER66B LTR ERV1 1 486 0 435 338 139 34 chr18 2329833 2330078 -83658856 + L2 LINE L2 1982 2200 -1114 452 259 133 6 chr18 2330078 2330236 -83658698 + MER45A DNA AcHobo 1 178 0 435 338 139 34 chr18 2330236 2330500 -83658434 + L2 LINE L2 2200 2574 -740 357 206 0 15 chr18 2330783 2330851 -83658083 - L2 LINE L2 -58 3255 3189 187 327 39 0 chr18 2331760 2331812 -83657122 - L2 LINE L2 -479 2835 2782 890 202 73 20 chr18 2331974 2332221 -83656713 + LTR37B LTR ERV1 209 468 0 4455 46 0 0 chr18 2332683 2333222 -83655712 - L1PA7 LINE L1 -15 6139 5601 226 273 26 13 chr18 2333241 2333318 -83655616 + U6 snRNA snRNA 5 82 -25 795 165 0 0 chr18 2333344 2333465 -83655469 - FLAM_C SINE Alu -12 121 1 2326 139 13 20 chr18 2333507 2333902 -83655032 + MER4E LTR ERV1 1 392 -387 1084 174 73 14 chr18 2333894 2334113 -83654821 + MER4D LTR ERV1 635 866 -37 * 32 86 0 0 chr18 2334113 2334194 -83654740 + AT_rich Low_complexity Low_complexity 1 81 0 259 108 0 0 chr18 2334194 2334231 -83654703 + MER4D LTR ERV1 867 903 0 298 292 89 36 chr18 2334527 2334695 -83654239 - L1ME LINE L1 -375 5795 5619 1860 159 53 3 chr18 2335653 2335974 -83652960 + MER1B DNA MER1_type 1 337 0 269 269 39 29 chr18 2336899 2337003 -83651931 - MIR SINE MIR -111 151 47 501 287 29 11 chr18 2337405 2337579 -83651355 - MIR SINE MIR -2 260 84 27 29 0 0 chr18 2338185 2338219 -83650715 + AT_rich Low_complexity Low_complexity 1 34 0 184 239 64 83 chr18 2339940 2340007 -83648927 - MIR SINE MIR -74 188 122 1618 102 0 78 chr18 2340007 2340252 -83648682 + AluSx SINE Alu 1 226 -86 184 239 64 83 chr18 2340252 2340293 -83648641 - MIR SINE MIR -140 122 82 2726 7 0 0 chr18 2340407 2340702 -83648232 + AluY SINE Alu 1 295 -16 577 150 9 26 chr18 2342935 2343034 -83645900 + MER41B LTR ERV1 1 97 -538 315 125 0 0 chr18 2343034 2343082 -83645852 - MLT2A1 LTR ERVL 0 444 397 399 258 0 0 chr18 2343203 2343358 -83645576 + (TA)n Simple_repeat Simple_repeat 1 155 0 246 174 0 0 chr18 2343388 2343434 -83645500 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 3199 70 0 0 chr18 2343459 2343857 -83645077 - MLT2A1 LTR ERVL -44 400 3 43026 72 19 5 chr18 2343859 2349438 -83639496 - HERVL-A1 LTR ERVL 0 5654 1 351 96 0 0 chr18 2349438 2349490 -83639444 - MLT2A1 LTR ERVL 0 444 393 3149 82 2 0 chr18 2349532 2349935 -83638999 - MLT2A1 LTR ERVL -40 404 1 3537 119 15 8 chr18 2349935 2350471 -83638463 + MER41B LTR ERV1 96 635 0 237 158 37 0 chr18 2350936 2351018 -83637916 + (TA)n Simple_repeat Simple_repeat 2 86 0 270 213 0 25 chr18 2351118 2351198 -83637736 - L1 LINE L1 -2597 4135 4058 3131 228 90 84 chr18 2351215 2352527 -83636407 - L1 LINE L1 -3768 2964 1661 437 236 55 18 chr18 2352527 2352637 -83636297 - FLAM_A SINE Alu -19 123 10 3131 228 90 84 chr18 2352637 2353394 -83635540 - L1 LINE L1 -5071 1661 68 343 229 0 0 chr18 2353462 2353532 -83635402 - L1M3d LINE L1 -5816 75 6 1263 75 0 0 chr18 2353971 2354159 -83634775 + (GA)n Simple_repeat Simple_repeat 1 221 -21 279 0 0 0 chr18 2354159 2354190 -83634744 + (TG)n Simple_repeat Simple_repeat 1 31 0 1263 75 0 0 chr18 2354190 2354213 -83634721 + (GA)n Simple_repeat Simple_repeat 220 242 0 355 50 0 33 chr18 2355005 2355065 -83633869 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 2120 138 3 0 chr18 2355167 2355478 -83633456 + AluSx SINE Alu 1 312 0 3225 248 43 27 chr18 2356265 2357966 -83630968 + L1MCb LINE L1 80 1810 -4754 801 166 20 0 chr18 2358415 2358566 -83630368 + L1MB7 LINE L1 6031 6184 0 2466 211 11 2 chr18 2358663 2359235 -83629699 - L1MA9 LINE L1 -1358 4788 4212 3576 213 30 13 chr18 2359243 2360541 -83628393 + L1MA9 LINE L1 4785 6104 -208 189 107 0 0 chr18 2360559 2360587 -83628347 + (CA)n Simple_repeat Simple_repeat 1 28 0 491 213 36 0 chr18 2360589 2360712 -83628222 + L1MA9 LINE L1 6166 6291 0 315 0 0 0 chr18 2360788 2360823 -83628111 + (CA)n Simple_repeat Simple_repeat 2 36 0 284 303 34 60 chr18 2361407 2361674 -83627260 + HAL1 LINE L1 1258 1517 -990 744 262 100 52 chr18 2361720 2362001 -83626933 - L1 LINE L1 -3152 2994 2728 2540 33 0 3 chr18 2362001 2362304 -83626630 + AluY SINE Alu 1 302 -9 744 262 100 52 chr18 2362304 2362641 -83626293 - L1 LINE L1 -3418 2728 2346 365 352 33 40 chr18 2362902 2363206 -83625728 + L1ME2 LINE L1 142 443 -5953 * 3507 38 17 0 chr18 2363191 2363712 -83625222 - L1PA4 LINE L1 -679 5475 4952 5967 27 0 0 chr18 2363712 2364407 -83624527 + L1PA4 LINE L1 5455 6155 0 2043 254 65 91 chr18 2364693 2365365 -83623569 + L1ME2 LINE L1 498 1186 -5210 1246 161 26 26 chr18 2365365 2365638 -83623296 + L1MA7 LINE L1 6014 6286 -5 2043 254 65 91 chr18 2365638 2366781 -83622153 + L1ME2 LINE L1 1186 2265 -4131 496 159 47 0 chr18 2366784 2366891 -83622043 + L1MC3 LINE L1 6978 7089 -696 243 244 37 49 chr18 2366896 2366978 -83621956 + MLT1F1 LTR MaLR 39 119 -448 1908 232 101 20 chr18 2367029 2368242 -83620692 + L1ME2 LINE L1 4715 6024 -209 1839 151 14 0 chr18 2368308 2368593 -83620341 + AluSx SINE Alu 1 289 -23 1099 294 150 25 chr18 2368812 2369285 -83619649 + MLT2E LTR ERVL 88 619 -9 184 314 0 0 chr18 2369698 2369749 -83619185 - L2 LINE L2 -2 3270 3220 267 326 41 48 chr18 2369894 2370041 -83618893 + L2 LINE L2 1780 1925 -1389 842 247 62 4 chr18 2370399 2370626 -83618308 - LTR33 LTR ERVL 0 521 282 466 316 0 7 chr18 2370626 2370765 -83618169 - LTR33 LTR ERVL -354 167 30 1842 242 33 44 chr18 2371137 2371212 -83617722 + MER92B LTR ERV1 1 75 -561 3080 136 36 32 chr18 2371212 2371736 -83617198 - MER1A DNA MER1_type -1 526 1 1842 242 33 44 chr18 2371736 2372201 -83616733 + MER92B LTR ERV1 75 535 -101 263 182 0 146 chr18 2372260 2372370 -83616564 + MER92B LTR ERV1 543 636 0 542 323 60 28 chr18 2372422 2372670 -83616264 - L2 LINE L2 -2 3270 3015 1755 195 3 17 chr18 2372776 2373125 -83615809 - MER2 DNA MER2_type 0 344 1 21 95 0 0 chr18 2374672 2374735 -83614199 + AT_rich Low_complexity Low_complexity 1 63 0 227 256 0 0 chr18 2375175 2375214 -83613720 + L2 LINE L2 3251 3289 -24 7661 21 4 1 chr18 2375648 2377064 -83611870 + L1PA4 LINE L1 4737 6155 0 180 0 0 0 chr18 2377071 2377091 -83611843 + (TAAAA)n Simple_repeat Simple_repeat 3 22 0 790 154 77 0 chr18 2377525 2377681 -83611253 - L1MB3 LINE L1 -2 6181 6014 22 35 0 0 chr18 2378036 2378065 -83610869 + AT_rich Low_complexity Low_complexity 1 29 0 203 397 29 29 chr18 2378388 2378524 -83610410 + L2 LINE L2 3122 3257 -15 646 321 67 0 chr18 2378804 2379044 -83609890 - MIR SINE MIR 0 262 7 2325 87 3 0 chr18 2379153 2379462 -83609472 + AluSg SINE Alu 1 310 0 203 235 29 44 chr18 2379785 2379853 -83609081 + (CATATA)n Simple_repeat Simple_repeat 2 68 0 191 260 50 0 chr18 2379870 2379946 -83608988 - MIR SINE MIR -108 154 75 593 272 31 31 chr18 2379973 2380164 -83608770 + MLT1G LTR MaLR 400 590 0 1383 159 61 0 chr18 2380603 2380848 -83608086 - AluJb SINE Alu -47 265 6 21 36 0 0 chr18 2381627 2381655 -83607279 + AT_rich Low_complexity Low_complexity 1 28 0 587 322 33 0 chr18 2381778 2381961 -83606973 - MIR SINE MIR -13 249 61 201 390 34 21 chr18 2382143 2382379 -83606555 + L2 LINE L2 2819 3057 -215 2489 111 5 24 chr18 2382549 2382920 -83606014 - THE1B LTR MaLR 0 364 1 21 36 0 0 chr18 2383022 2383050 -83605884 + AT_rich Low_complexity Low_complexity 1 28 0 2478 64 0 0 chr18 2383171 2383469 -83605465 - AluY SINE Alu -13 298 1 260 292 0 22 chr18 2383673 2383762 -83605172 - MIR SINE MIR -78 184 98 287 229 153 8 chr18 2384112 2384230 -83604704 - L1ME4a LINE L1 0 6121 5987 340 303 32 83 chr18 2384465 2384742 -83604192 - L2 LINE L2 -677 2637 2375 259 299 121 12 chr18 2384752 2384911 -83604023 - MER69A DNA AcHobo -1 176 2 246 234 141 0 chr18 2384917 2384981 -83603953 - L2 LINE L2 -953 2361 2289 374 291 111 83 chr18 2386117 2386550 -83602384 + MLT1J2 LTR MaLR 3 447 -3 232 306 194 6 chr18 2387868 2388028 -83600906 + L2 LINE L2 2863 3052 -261 27 0 0 0 chr18 2388282 2388309 -83600625 + AT_rich Low_complexity Low_complexity 1 27 0 24 53 0 0 chr18 2389095 2389133 -83599801 + AT_rich Low_complexity Low_complexity 1 38 0 5728 34 0 1 chr18 2389266 2389942 -83598992 - L1PA5 LINE L1 -6 6148 5474 22 35 0 0 chr18 2390137 2390166 -83598768 + AT_rich Low_complexity Low_complexity 1 29 0 26229 133 14 13 chr18 2391051 2392694 -83596240 + L1PA8A LINE L1 336 1976 -4470 1254 184 49 88 chr18 2392694 2393162 -83595772 - LTR7 LTR ERV1 0 450 1 26229 133 14 13 chr18 2393162 2397558 -83591376 + L1PA8A LINE L1 1976 6446 0 182 143 29 29 chr18 2397616 2397686 -83591248 + (CATATA)n Simple_repeat Simple_repeat 3 72 0 2320 65 7 7 chr18 2397695 2397989 -83590945 - AluSg SINE Alu -16 294 1 296 270 45 18 chr18 2398037 2398148 -83590786 - HAL1b LINE L1 -41 1307 1194 223 144 33 22 chr18 2398162 2398252 -83590682 + (TA)n Simple_repeat Simple_repeat 1 91 0 244 231 141 13 chr18 2398279 2398357 -83590577 + MIR SINE MIR 118 205 -57 228 286 181 48 chr18 2398369 2398579 -83590355 + L2 LINE L2 3067 3304 -9 186 300 57 0 chr18 2398651 2398721 -83590213 - MIR3 SINE MIR -48 160 87 300 200 0 0 chr18 2399505 2399570 -83589364 + (TG)n Simple_repeat Simple_repeat 2 66 0 1087 106 6 12 chr18 2400013 2400174 -83588760 - AluSq SINE Alu -30 283 124 413 313 62 32 chr18 2401107 2401943 -83586991 - L1M4 LINE L1 -3155 2991 2131 32 67 0 0 chr18 2402057 2402117 -83586817 + AT_rich Low_complexity Low_complexity 1 60 0 434 195 49 46 chr18 2402198 2402351 -83586583 + L1M4 LINE L1 5658 5816 -368 347 244 133 118 chr18 2402371 2402383 -83586551 + L1ME3A LINE L1 5751 5761 -409 1423 244 34 8 chr18 2402383 2402739 -83586195 - MLT1A1 LTR MaLR 0 365 1 347 244 133 118 chr18 2402739 2403140 -83585794 + L1ME3A LINE L1 5761 6170 0 2114 104 0 0 chr18 2403156 2403436 -83585498 + AluSx SINE Alu 1 280 -32 279 0 0 0 chr18 2403437 2403468 -83585466 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 10270 140 20 14 chr18 2404797 2405104 -83583830 + Tigger1 DNA MER2_type 2 306 -2112 2288 66 3 0 chr18 2405104 2405390 -83583544 + AluY SINE Alu 1 287 -24 10270 140 20 14 chr18 2405390 2405401 -83583533 + Tigger1 DNA MER2_type 306 315 -2103 180 0 0 0 chr18 2405401 2405421 -83583513 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 10270 140 20 14 chr18 2405421 2406784 -83582150 + Tigger1 DNA MER2_type 315 1695 -723 323 250 24 0 chr18 2406850 2406934 -83582000 - L1MEd LINE L1 -5932 187 102 2606 45 0 0 chr18 2407439 2407750 -83581184 + AluY SINE Alu 1 311 0 210 333 67 0 chr18 2408173 2408293 -83580641 + MIR SINE MIR 129 256 -6 256 391 6 39 chr18 2409526 2409705 -83579229 - MER5B DNA MER1_type 0 178 6 767 173 0 0 chr18 2409886 2410019 -83578915 + AluJb SINE Alu 170 302 -10 2044 144 3 3 chr18 2410498 2410810 -83578124 - AluSx SINE Alu 0 312 1 546 312 80 37 chr18 2410835 2411407 -83577527 - L1ME3A LINE L1 -302 5868 5264 265 302 35 12 chr18 2411664 2411750 -83577184 + L2 LINE L2 3190 3277 -36 262 284 93 21 chr18 2411908 2412102 -83576832 - L1ME3A LINE L1 -1052 5094 4887 313 344 19 6 chr18 2412457 2412614 -83576320 - L1ME3A LINE L1 -1610 4536 4378 356 143 171 0 chr18 2412616 2412686 -83576248 - Tigger3(Golem) DNA MER2_type 0 3037 2956 2332 147 27 77 chr18 2412702 2413225 -83575709 + Tigger3(Golem) DNA MER2_type 2392 2888 -141 401 127 52 0 chr18 2413363 2413497 -83575437 + (TA)n Simple_repeat Simple_repeat 2 142 0 269 132 103 44 chr18 2413500 2413568 -83575366 - LTR66 LTR ERVL -171 439 368 1175 275 52 55 chr18 2414608 2415666 -83573268 + L1MCc LINE L1 1261 2529 -4593 1303 246 96 2 chr18 2415679 2416105 -83572829 + L1MB3 LINE L1 4897 5362 -784 783 218 70 91 chr18 2416115 2416668 -83572266 + MER52A LTR ERV1 667 1349 -406 292 318 50 39 chr18 2416672 2416851 -83572083 + MER52A LTR ERV1 1290 1470 -285 * 644 294 0 0 chr18 2416849 2417012 -83571922 + MER52A LTR ERV1 1593 1755 0 4453 169 11 2 chr18 2417012 2417813 -83571121 + L1MB3 LINE L1 5360 6167 -16 387 287 124 16 chr18 2417831 2418089 -83570845 + L1MCc LINE L1 2564 2849 -4273 1417 265 75 16 chr18 2418170 2418743 -83570191 + L1MCc LINE L1 2945 3551 -3390 21 0 0 0 chr18 2418813 2418834 -83570100 + AT_rich Low_complexity Low_complexity 1 21 0 294 73 0 0 chr18 2419295 2419336 -83569598 + (TG)n Simple_repeat Simple_repeat 2 42 0 24 53 0 0 chr18 2419592 2419630 -83569304 + AT_rich Low_complexity Low_complexity 1 38 0 1634 168 33 0 chr18 2419741 2420038 -83568896 + AluJb SINE Alu 1 306 0 316 238 12 0 chr18 2420053 2420133 -83568801 + L1ME4a LINE L1 5778 5858 -263 2692 197 55 4 chr18 2421559 2422082 -83566852 - MER44D DNA MER2_type 0 605 1 195 291 0 0 chr18 2422183 2422238 -83566696 + L2 LINE L2 3016 3070 -243 452 304 18 0 chr18 2422905 2423017 -83565917 + L2 LINE L2 3199 3312 -1 22 56 0 0 chr18 2423046 2423082 -83565852 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr18 2427324 2427348 -83561586 + AT_rich Low_complexity Low_complexity 1 24 0 872 215 53 46 chr18 2428006 2428437 -83560497 + MLT1A1 LTR MaLR 1 365 0 379 358 83 5 chr18 2428533 2428726 -83560208 - MIR SINE MIR -6 256 49 287 313 109 7 chr18 2428810 2428957 -83559977 - MIR SINE MIR -72 190 29 1326 242 73 61 chr18 2429167 2429643 -83559291 - LTR65 LTR ERV1 -28 641 160 3479 139 16 7 chr18 2429725 2430294 -83558640 - Tigger1 DNA MER2_type 0 2418 1845 4243 170 8 1 chr18 2430294 2431087 -83557847 - L1P LINE L1 -1208 4938 4141 7721 137 24 9 chr18 2431087 2432346 -83556588 - Tigger1 DNA MER2_type -867 1551 274 1369 249 84 41 chr18 2432703 2433193 -83555741 + MLT1J LTR MaLR 1 511 0 765 244 62 0 chr18 2433413 2433589 -83555345 + MIR SINE MIR 2 188 -74 24 91 0 0 chr18 2433610 2433676 -83555258 + AT_rich Low_complexity Low_complexity 1 66 0 235 260 20 0 chr18 2433676 2433726 -83555208 + MIR SINE MIR 191 241 -21 6224 26 0 3 chr18 2436013 2436769 -83552165 + L1PA5 LINE L1 5405 6158 0 260 91 23 0 chr18 2437727 2437771 -83551163 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 3409 272 30 13 chr18 2438054 2439040 -83549894 + L1MCb LINE L1 12 1014 -5031 3644 175 28 13 chr18 2439041 2439727 -83549207 - LTR34 LTR ERV1 0 699 4 2386 253 28 20 chr18 2439729 2440493 -83548441 + L1MCb LINE L1 1013 1782 -4782 1557 230 42 16 chr18 2440490 2440938 -83547996 + L1M4 LINE L1 4547 5006 -1140 * 7075 185 46 30 chr18 2441019 2442541 -83546393 + L1MC3 LINE L1 6222 7768 -17 241 280 110 10 chr18 2442959 2443059 -83545875 + MIR SINE MIR 28 137 -125 633 149 214 35 chr18 2443214 2443415 -83545519 + L1MC3 LINE L1 6866 7102 -683 405 253 0 0 chr18 2443419 2443498 -83545436 + MLT1F1 LTR MaLR 45 123 -444 2389 200 27 46 chr18 2443518 2444104 -83544830 + L1MD3 LINE L1 7421 7995 0 232 222 19 0 chr18 2444246 2444300 -83544634 + (TA)n Simple_repeat Simple_repeat 2 56 0 21 0 0 0 chr18 2444318 2444339 -83544595 + AT_rich Low_complexity Low_complexity 1 21 0 39 38 0 0 chr18 2445317 2445370 -83543564 + AT_rich Low_complexity Low_complexity 1 53 0 735 154 0 22 chr18 2445383 2445519 -83543415 + FLAM_C SINE Alu 1 133 0 198 300 79 21 chr18 2445987 2446127 -83542807 - MIR SINE MIR -29 233 86 259 273 151 6 chr18 2446955 2447125 -83541809 - MIR SINE MIR -16 246 48 544 324 84 31 chr18 2447268 2447555 -83541379 - L3 LINE CR1 -34 1543 1242 229 68 45 0 chr18 2447608 2447652 -83541282 + T-rich Low_complexity Low_complexity 3 48 0 791 190 61 0 chr18 2447659 2447822 -83541112 - L1PB4 LINE L1 -18 6138 5966 441 288 102 53 chr18 2447969 2448195 -83540739 - L3 LINE CR1 -557 1020 784 314 294 71 71 chr18 2448281 2448478 -83540456 - MIR SINE MIR -46 216 20 804 337 80 28 chr18 2448493 2448995 -83539939 - L3 LINE CR1 -861 716 189 249 197 0 0 chr18 2449002 2449063 -83539871 + CT-rich Low_complexity Low_complexity 2 62 0 413 315 87 0 chr18 2449456 2449605 -83539329 - L2 LINE L2 -559 2755 2594 237 351 13 0 chr18 2449697 2449774 -83539160 + MIR SINE MIR 69 146 -116 291 128 70 6 chr18 2449964 2450120 -83538814 + (TA)n Simple_repeat Simple_repeat 1 166 0 809 282 109 33 chr18 2452652 2453871 -83535063 + L1M4 LINE L1 2506 4068 -2078 3574 111 0 4 chr18 2453871 2454384 -83534550 - MER9 LTR ERVK 0 511 1 809 282 109 33 chr18 2454384 2455076 -83533858 + L1M4 LINE L1 4068 4706 -1440 2514 241 83 50 chr18 2455117 2456389 -83532545 + Zaphod DNA AcHobo 2711 4025 -6 2785 142 28 2 chr18 2456497 2456970 -83531964 - MER31A LTR ERV1 0 485 1 21 71 0 0 chr18 2457727 2457769 -83531165 + AT_rich Low_complexity Low_complexity 1 42 0 225 308 0 0 chr18 2457922 2457974 -83530960 + polypyrimidine Low_complexity Low_complexity 4 55 0 1863 215 100 48 chr18 2458755 2459508 -83529426 + Charlie1 DNA MER1_type 1929 2720 -41 199 273 100 73 chr18 2459552 2459662 -83529272 - MIR SINE MIR -64 144 32 2314 175 89 0 chr18 2459662 2460091 -83528843 - MLT1C LTR MaLR 0 467 1 22 0 0 0 chr18 2460254 2460276 -83528658 + AT_rich Low_complexity Low_complexity 1 22 0 253 313 0 0 chr18 2460915 2461011 -83527923 - L1MC4 LINE L1 -1333 6709 6614 330 26 0 0 chr18 2461025 2461064 -83527870 + (CA)n Simple_repeat Simple_repeat 2 40 0 180 97 0 0 chr18 2461064 2461095 -83527839 + (GA)n Simple_repeat Simple_repeat 1 31 0 540 175 8 63 chr18 2461100 2461226 -83527708 - MLT2B2 LTR ERVL -396 119 1 4764 128 1 0 chr18 2461738 2462435 -83526499 + L1P LINE L1 1 698 -5448 7470 33 3 1 chr18 2462435 2463956 -83524978 + L1PA5 LINE L1 4616 6152 -2 489 313 34 30 chr18 2464129 2464391 -83524543 + L1MEc LINE L1 112 374 -6022 5732 146 26 3 chr18 2464487 2465617 -83523317 - L1PA15-16 LINE L1 -4162 2687 1414 1407 205 17 0 chr18 2465615 2465908 -83523026 + L1 LINE L1 4011 4308 -1838 * 284 205 89 9 chr18 2465917 2466029 -83522905 - L1M4 LINE L1 -1723 4423 4303 495 233 89 38 chr18 2466111 2466347 -83522587 - L1MCa LINE L1 -3983 2443 2196 342 138 0 17 chr18 2466963 2467021 -83521913 - MER3 DNA MER1_type 0 209 153 1625 113 0 0 chr18 2467028 2467240 -83521694 + AluSq SINE Alu 1 212 -101 639 67 0 0 chr18 2467540 2467629 -83521305 + (TA)n Simple_repeat Simple_repeat 1 89 0 1513 190 25 4 chr18 2469006 2469285 -83519649 + MER49 LTR ERV1 1 285 -638 * 2923 182 12 85 chr18 2469258 2470071 -83518863 + MER4D LTR ERV1 43 903 0 1911 161 7 0 chr18 2470190 2470482 -83518452 + AluSx SINE Alu 1 294 -18 723 181 12 31 chr18 2470604 2470764 -83518170 - L1MA9 LINE L1 -89 6223 6067 5591 64 24 4 chr18 2470768 2471519 -83517415 - MER4E LTR ERV1 0 766 1 4847 133 59 24 chr18 2472370 2472673 -83516261 - MER4E-int LTR ERV1 -113 6645 6354 581 27 13 0 chr18 2472673 2472748 -83516186 + (TAGA)n Simple_repeat Simple_repeat 2 77 0 4847 133 59 24 chr18 2472748 2473314 -83515620 - MER4E-int LTR ERV1 -404 6354 5746 1675 133 3 16 chr18 2473414 2473734 -83515200 - MER4E-int LTR ERV1 -1900 4858 4452 * 3197 144 81 4 chr18 2473733 2474253 -83514681 - MER4E-int LTR ERV1 -2670 4088 3529 2078 107 70 32 chr18 2474248 2474689 -83514245 - MER4B-int LTR ERV1 -4513 2245 1788 * 2200 130 0 0 chr18 2474716 2475016 -83513918 - AluSp SINE Alu -13 300 1 460 123 0 0 chr18 2475745 2475810 -83513124 + THE1B LTR MaLR 300 364 0 338 249 50 88 chr18 2476434 2476615 -83512319 - L1MC4a LINE L1 -1524 6284 6111 3623 185 103 18 chr18 2476615 2477432 -83511502 + L1M2 LINE L1 1 886 -5963 455 135 0 0 chr18 2478748 2478822 -83510112 - AluJo SINE Alu -1 311 238 960 203 6 6 chr18 2478825 2479002 -83509932 - AluJo SINE Alu -135 177 1 2224 172 56 52 chr18 2480921 2481422 -83507512 + MLT1D LTR MaLR 1 503 -2 195 42 0 0 chr18 2481704 2481728 -83507206 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 228 282 56 0 chr18 2481737 2481808 -83507126 - L2 LINE L2 -38 3275 3201 387 20 0 20 chr18 2482383 2482433 -83506501 + MER30B DNA MER1_type 4 52 -138 2211 206 60 22 chr18 2482533 2483068 -83505866 + L1M2 LINE L1 882 1436 -5413 207 0 0 0 chr18 2483685 2483708 -83505226 + (TG)n Simple_repeat Simple_repeat 1 23 0 220 411 81 0 chr18 2483787 2483911 -83505023 - L2 LINE L2 -2 3270 3137 35 107 0 0 chr18 2484232 2484372 -83504562 + AT_rich Low_complexity Low_complexity 1 140 0 21 0 0 0 chr18 2484532 2484553 -83504381 + AT_rich Low_complexity Low_complexity 1 21 0 205 293 30 50 chr18 2485355 2485454 -83503480 - MIR SINE MIR -100 162 66 394 237 21 11 chr18 2485549 2485642 -83503292 + MIR SINE MIR 42 135 -73 2677 300 47 49 chr18 2485930 2486634 -83502300 - ERVL LTR ERVL -1211 4553 3849 2363 177 14 7 chr18 2486634 2487063 -83501871 - Tigger2a DNA MER2_type 0 434 3 2677 300 47 49 chr18 2487063 2487287 -83501647 - ERVL LTR ERVL -1915 3849 3626 2071 108 0 14 chr18 2487287 2487595 -83501339 + AluSq SINE Alu 1 304 0 2677 300 47 49 chr18 2487595 2487879 -83501055 - ERVL LTR ERVL -2138 3626 3341 306 272 58 90 chr18 2487932 2488501 -83500433 + L1ME1 LINE L1 1041 1438 -4842 941 258 52 52 chr18 2488525 2489002 -83499932 + L1ME1 LINE L1 2486 2962 -3420 1141 249 115 11 chr18 2489091 2489622 -83499312 + L1M4 LINE L1 4128 4713 -1433 5075 127 26 5 chr18 2489637 2490433 -83498501 - L1PA11 LINE L1 0 6174 5362 731 251 85 15 chr18 2490468 2490727 -83498207 + L1M4 LINE L1 4756 5032 -1114 468 237 33 106 chr18 2490993 2491322 -83497612 + L1ME1 LINE L1 3392 3696 -2686 311 340 70 59 chr18 2491356 2491627 -83497307 + L1ME1 LINE L1 3851 4124 -2258 2471 211 74 26 chr18 2491668 2492121 -83496813 - L1MA9 LINE L1 -38 6274 5778 214 29 57 0 chr18 2492121 2492156 -83496778 + (TG)n Simple_repeat Simple_repeat 2 38 0 2471 211 74 26 chr18 2492156 2492362 -83496572 - L1MA9 LINE L1 -534 5778 5583 2559 169 14 0 chr18 2492363 2492783 -83496151 + MSTB LTR MaLR 1 426 0 8460 177 20 62 chr18 2492783 2493186 -83495748 + MSTB-int LTR MaLR 1 419 -1232 601 61 0 0 chr18 2493186 2493268 -83495666 + Alu SINE Alu 222 303 -8 8460 177 20 62 chr18 2493268 2494369 -83494565 + MSTB-int LTR MaLR 419 1512 -139 5282 82 20 11 chr18 2494369 2495128 -83493806 - MER4E LTR ERV1 0 766 1 8460 177 20 62 chr18 2495128 2495262 -83493672 + MSTB-int LTR MaLR 1512 1650 -1 2204 201 19 2 chr18 2495263 2495682 -83493252 + MSTB LTR MaLR 1 426 0 1538 170 9 16 chr18 2495684 2496102 -83492832 - L1MA9 LINE L1 -707 5584 5167 1375 313 51 20 chr18 2496104 2497182 -83491752 + L1ME1 LINE L1 4182 5292 -1090 2108 101 3 14 chr18 2497296 2497616 -83491318 + AluSq SINE Alu 1 317 0 1300 170 37 63 chr18 2498834 2498998 -83489936 + MER82 DNA MER2_type 38 192 -461 2255 116 16 32 chr18 2498998 2499377 -83489557 - THE1C LTR MaLR -2 373 1 1300 170 37 63 chr18 2499377 2499512 -83489422 + MER82 DNA MER2_type 192 329 -324 896 261 33 9 chr18 2499498 2499709 -83489225 + MER82 DNA MER2_type 438 653 0 * 297 291 66 70 chr18 2499809 2500053 -83488881 + MER102b DNA MER1_type 99 341 0 354 148 58 3 chr18 2500389 2500462 -83488472 - AluYb8 SINE Alu -6 302 236 919 162 0 0 chr18 2500479 2500621 -83488313 - FLAM_C SINE Alu -1 142 1 3700 48 7 0 chr18 2501082 2501543 -83487391 - L1PA7 LINE L1 -1 6153 5690 184 390 41 24 chr18 2501752 2501875 -83487059 + L2 LINE L2 3132 3256 -16 26 74 0 0 chr18 2502914 2502968 -83485966 + AT_rich Low_complexity Low_complexity 1 54 0 678 127 48 6 chr18 2503320 2503485 -83485449 + CT-rich Low_complexity Low_complexity 1 172 0 2378 259 91 20 chr18 2553535 2554364 -83434570 + L1ME1 LINE L1 5511 6397 -5 691 271 27 32 chr18 2554601 2554789 -83434145 + MIR SINE MIR 5 191 -71 457 297 17 19 chr18 2554993 2555219 -83433715 - MIR SINE MIR -3 259 35 192 266 142 18 chr18 2555256 2555369 -83433565 - MIR SINE MIR -32 230 104 518 270 34 80 chr18 2555731 2555994 -83432940 - MER41E LTR ERV1 0 512 262 2359 110 0 0 chr18 2556506 2556871 -83432063 + AluSx SINE Alu 1 365 0 1949 277 101 56 chr18 2558474 2559857 -83429077 + HAL1 LINE L1 144 1589 -918 488 263 58 104 chr18 2559867 2560232 -83428702 - MLT1I LTR MaLR 0 409 62 1044 278 62 53 chr18 2560302 2560657 -83428277 + HAL1 LINE L1 1634 1984 -523 1850 202 116 9 chr18 2560657 2561113 -83427821 + MLT1D LTR MaLR 1 505 0 1044 278 62 53 chr18 2561113 2561300 -83427634 + HAL1 LINE L1 1984 2186 -321 8221 53 1 0 chr18 2561300 2562265 -83426669 - LTR5 LTR ERVK -3 966 1 1044 278 62 53 chr18 2562265 2562431 -83426503 + HAL1 LINE L1 2186 2349 -158 1317 210 131 79 chr18 2563110 2563692 -83425242 + LTR9 LTR ERV1 1 612 0 288 0 0 0 chr18 2563715 2563747 -83425187 + (TG)n Simple_repeat Simple_repeat 2 33 0 353 247 148 66 chr18 2563982 2564374 -83424560 + L1ME3 LINE L1 2687 3110 -3036 2165 254 141 37 chr18 2564440 2566694 -83422240 + L1ME3 LINE L1 3628 6118 -44 226 226 71 36 chr18 2566729 2566813 -83422121 + L1ME LINE L1 5433 5519 -645 2099 97 10 7 chr18 2566968 2567256 -83421678 + AluSp SINE Alu 1 289 -24 183 109 65 33 chr18 2567644 2567736 -83421198 + (TA)n Simple_repeat Simple_repeat 1 95 0 222 37 0 0 chr18 2567764 2567791 -83421143 + (CA)n Simple_repeat Simple_repeat 2 28 0 1016 224 0 4 chr18 2567953 2568181 -83420753 + L1MA9 LINE L1 4984 5210 -936 716 254 54 19 chr18 2568188 2568448 -83420486 + L1MA9 LINE L1 5935 6203 -109 14153 125 46 14 chr18 2568456 2568618 -83420316 - Tigger1 DNA MER2_type -1 2417 2262 1532 104 24 90 chr18 2568618 2568907 -83420027 - L1PB1 LINE L1 0 6151 5882 14153 125 46 14 chr18 2568907 2571062 -83417872 - Tigger1 DNA MER2_type -156 2262 27 28 71 0 0 chr18 2571111 2571167 -83417767 + AT_rich Low_complexity Low_complexity 1 56 0 2184 119 13 3 chr18 2573488 2573798 -83415136 + AluSq SINE Alu 1 313 0 23 54 0 0 chr18 2574118 2574155 -83414779 + AT_rich Low_complexity Low_complexity 1 37 0 5327 169 57 10 chr18 2574583 2575684 -83413250 - L1MC1 LINE L1 -2 6331 5178 443 247 73 36 chr18 2575885 2576104 -83412830 - MER106A DNA MER1_type -9 227 1 1791 142 66 51 chr18 2576554 2576886 -83412048 + MER1B DNA MER1_type 1 337 0 272 351 32 13 chr18 2577034 2577188 -83411746 - HsTC2 DNA Tc2 -1022 876 720 23 54 0 0 chr18 2577465 2577502 -83411432 + AT_rich Low_complexity Low_complexity 1 37 0 255 197 92 0 chr18 2578186 2578262 -83410672 - L1MCc LINE L1 -4137 2804 2722 258 121 44 66 chr18 2578278 2578460 -83410474 + (TA)n Simple_repeat Simple_repeat 1 178 0 2672 221 129 80 chr18 2578505 2579385 -83409549 - L1MCc LINE L1 -4346 2776 1941 189 0 0 0 chr18 2579385 2579406 -83409528 + (TC)n Simple_repeat Simple_repeat 2 22 0 2672 221 129 80 chr18 2579406 2579526 -83409408 - L1MCc LINE L1 -5181 1941 1828 2106 133 0 3 chr18 2579526 2579826 -83409108 - AluSx SINE Alu -13 299 1 2672 221 129 80 chr18 2579826 2581054 -83407880 - L1MCc LINE L1 -5294 1828 7 709 300 67 0 chr18 2581881 2582104 -83406830 + MIR SINE MIR 19 256 -6 546 202 128 0 chr18 2582548 2582657 -83406277 + FLAM_A SINE Alu 1 123 -10 277 265 92 41 chr18 2583159 2583257 -83405677 - MIR SINE MIR -64 144 42 1719 261 131 2 chr18 2584795 2585300 -83403634 - MLT1E2 LTR MaLR -26 600 31 26 30 0 0 chr18 2585735 2585768 -83403166 + AT_rich Low_complexity Low_complexity 1 33 0 326 286 71 0 chr18 2586883 2587009 -83401925 + MIR SINE MIR 78 212 -50 853 186 19 48 chr18 2587032 2587242 -83401692 + L1MA9 LINE L1 6075 6278 -34 677 288 64 29 chr18 2587829 2588110 -83400824 + MLT1I LTR MaLR 81 371 -38 319 290 137 7 chr18 2588557 2588857 -83400077 - L1ME LINE L1 -4969 1415 1077 398 314 131 21 chr18 2588867 2588878 -83400056 - L1ME LINE L1 -5175 1197 1189 2249 109 3 0 chr18 2588878 2589190 -83399744 - AluSq SINE Alu 0 313 1 398 314 131 21 chr18 2589190 2589506 -83399428 - L1ME LINE L1 -5183 1189 834 25 0 0 0 chr18 2591086 2591111 -83397823 + AT_rich Low_complexity Low_complexity 1 25 0 32 0 0 0 chr18 2592043 2592075 -83396859 + AT_rich Low_complexity Low_complexity 1 32 0 1520 273 32 38 chr18 2592131 2592637 -83396297 + L2 LINE L2 2127 2629 -685 649 243 14 0 chr18 2592657 2592797 -83396137 - MLT1D LTR MaLR -1 504 363 306 330 62 22 chr18 2592801 2592980 -83395954 - L1ME LINE L1 -458 5663 5478 2647 14 0 0 chr18 2593473 2593765 -83395169 - AluYa5 SINE Alu -19 292 1 295 311 138 54 chr18 2595721 2596091 -83392843 + L2 LINE L2 2863 3263 -9 1399 143 136 4 chr18 2597519 2597798 -83391136 - MER2 DNA MER2_type -14 331 16 228 35 0 0 chr18 2597874 2597903 -83391031 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 2001 112 3 11 chr18 2597916 2598201 -83390733 - AluSq SINE Alu -30 283 1 252 86 0 0 chr18 2598819 2598854 -83390080 + (T)n Simple_repeat Simple_repeat 1 35 0 2432 77 0 13 chr18 2598966 2599279 -83389655 - AluSc SINE Alu 0 309 1 638 265 66 0 chr18 2599462 2599628 -83389306 + MLT1I LTR MaLR 3 179 -230 644 303 50 17 chr18 2600554 2600914 -83388020 + L1MDb LINE L1 794 1165 -5244 850 263 111 5 chr18 2600915 2601132 -83387802 + MLT1I LTR MaLR 170 409 0 23 33 0 0 chr18 2603435 2603465 -83385469 + AT_rich Low_complexity Low_complexity 1 30 0 1853 70 8 0 chr18 2603593 2603837 -83385097 + L1PA10 LINE L1 5919 6164 -4 2090 121 14 10 chr18 2604959 2605256 -83383678 + AluSg SINE Alu 3 300 -10 1660 260 43 57 chr18 2606731 2607332 -83381602 - MLT1E LTR MaLR 0 593 1 684 316 134 25 chr18 2608615 2609049 -83379885 + L2 LINE L2 2830 3310 -3 398 242 63 11 chr18 2609660 2609755 -83379179 + MIR SINE MIR 42 141 -67 663 348 27 47 chr18 2612789 2613232 -83375702 + LTR16A LTR ERVL 17 450 0 2057 107 47 0 chr18 2613622 2613921 -83375013 + AluSp SINE Alu 1 313 0 359 323 108 11 chr18 2615134 2615320 -83373614 + MIR SINE MIR 1 204 -58 234 0 0 0 chr18 2615385 2615411 -83373523 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 211 250 190 20 chr18 2615411 2615505 -83373429 - L2 LINE L2 -13 3300 3190 419 270 16 16 chr18 2615696 2615882 -83373052 - MER41B LTR ERV1 -205 430 112 820 256 134 13 chr18 2616082 2616496 -83372438 - L2 LINE L2 -225 3088 2635 1873 107 3 85 chr18 2616815 2617134 -83371800 - MER4A LTR ERV1 0 664 372 554 67 100 11 chr18 2617185 2617275 -83371659 - MER4A LTR ERV1 -566 98 1 3727 132 28 56 chr18 2617276 2617995 -83370939 - LTR34 LTR ERV1 0 699 1 1405 224 123 55 chr18 2618413 2618980 -83369954 - MER50 LTR ERV1 -48 686 81 2514 153 92 2 chr18 2619017 2619219 -83369715 - MER41C LTR ERV1 -77 477 294 2267 100 0 3 chr18 2619219 2619518 -83369416 - AluSc SINE Alu -11 298 1 2514 153 92 2 chr18 2619518 2619752 -83369182 - MER41C LTR ERV1 -260 294 2 335 384 29 14 chr18 2619927 2620065 -83368869 - MIR SINE MIR -111 151 12 317 349 9 9 chr18 2620069 2620178 -83368756 - MIR SINE MIR -106 156 48 21 71 0 0 chr18 2621116 2621158 -83367776 + AT_rich Low_complexity Low_complexity 1 42 0 439 276 61 91 chr18 2621910 2622602 -83366332 + L1MEd LINE L1 563 1233 -4886 23 0 0 0 chr18 2623010 2623033 -83365901 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr18 2623223 2623248 -83365686 + AT_rich Low_complexity Low_complexity 1 25 0 2076 250 65 30 chr18 2623257 2624623 -83364311 + L1MA8 LINE L1 467 2976 -4520 1469 203 39 13 chr18 2624629 2625201 -83363733 + L1MA8 LINE L1 3298 3890 -3675 * 5237 157 23 30 chr18 2625176 2626390 -83362544 + L1MA8 LINE L1 6511 7709 -1 530 282 192 25 chr18 2626691 2627213 -83361721 + L1M4 LINE L1 2230 2838 -3308 387 321 36 7 chr18 2627288 2627428 -83361506 - L2 LINE L2 -25 3288 3145 24 0 0 0 chr18 2627960 2627984 -83360950 + AT_rich Low_complexity Low_complexity 1 24 0 2150 126 3 3 chr18 2628058 2628360 -83360574 - AluSx SINE Alu -10 302 1 720 212 47 12 chr18 2629101 2629271 -83359663 + MIR SINE MIR 5 180 -82 778 157 6 54 chr18 2629713 2629879 -83359055 - MER3 DNA MER1_type 0 209 52 288 200 0 0 chr18 2630850 2630910 -83358024 + (ATG)n Simple_repeat Simple_repeat 1 60 0 184 322 46 11 chr18 2630910 2630997 -83357937 - MIR SINE MIR -96 112 23 180 77 0 0 chr18 2632355 2632381 -83356553 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 2612 45 0 0 chr18 2634415 2634724 -83354210 + AluY SINE Alu 1 309 -2 208 148 0 37 chr18 2634815 2634869 -83354065 + (TA)n Simple_repeat Simple_repeat 2 53 0 193 167 39 39 chr18 2634923 2635025 -83353909 + (TA)n Simple_repeat Simple_repeat 2 103 0 262 193 37 22 chr18 2635117 2635252 -83353682 + (TA)n Simple_repeat Simple_repeat 2 138 0 8474 164 32 11 chr18 2636524 2637939 -83350995 + L1MA8 LINE L1 3745 5222 -1069 1896 123 72 0 chr18 2637939 2638216 -83350718 + AluSq SINE Alu 1 297 -16 8474 164 32 11 chr18 2638216 2638926 -83350008 + L1MA8 LINE L1 5222 5916 -375 822 187 18 0 chr18 2638920 2639086 -83349848 - L1MA6 LINE L1 -81 6219 6051 * 571 43 0 0 chr18 2639088 2639158 -83349776 - MER4C LTR ERV1 -1 464 395 1977 156 38 43 chr18 2639186 2639380 -83349554 + L1MA7 LINE L1 5851 6044 -247 2363 125 112 96 chr18 2639380 2640034 -83348900 + MER4A LTR ERV1 1 664 0 1977 156 38 43 chr18 2640034 2640282 -83348652 + L1MA7 LINE L1 6044 6291 0 24 0 0 0 chr18 2640288 2640312 -83348622 + AT_rich Low_complexity Low_complexity 1 24 0 268 83 42 0 chr18 2640440 2640488 -83348446 + (TA)n Simple_repeat Simple_repeat 2 51 0 836 278 24 0 chr18 2640561 2640766 -83348168 + MER82 DNA MER2_type 444 653 0 4286 177 55 4 chr18 2640766 2641643 -83347291 + L1MB5 LINE L1 5240 6163 -11 305 279 114 32 chr18 2642434 2642592 -83346342 + MLT1L LTR MaLR 119 289 -326 1211 283 37 59 chr18 2643111 2644123 -83344811 - L2 LINE L2 -9 3304 2132 276 288 12 12 chr18 2644867 2644947 -83343987 - HAL1 LINE L1 -604 1903 1824 539 303 101 19 chr18 2644974 2645241 -83343693 - MLT1L LTR MaLR -321 294 6 288 77 0 0 chr18 2645397 2645436 -83343498 + (T)n Simple_repeat Simple_repeat 1 39 0 21 0 0 0 chr18 2645457 2645478 -83343456 + GC_rich Low_complexity Low_complexity 1 21 0 2197 122 0 10 chr18 2645634 2645945 -83342989 - AluSc SINE Alu -1 308 1 2264 109 0 0 chr18 2646111 2646413 -83342521 - AluSg SINE Alu -8 302 1 1858 144 0 24 chr18 2647809 2648127 -83340807 - AluSg SINE Alu 0 311 1 1943 140 15 29 chr18 2648482 2648824 -83340110 + THE1A LTR MaLR 1 337 -18 809 298 109 33 chr18 2649241 2649701 -83339233 - HAL1 LINE L1 -604 1903 1409 527 311 6 23 chr18 2649975 2650152 -83338782 - MIR SINE MIR -10 252 79 853 157 65 0 chr18 2650152 2650305 -83338629 + LTR32 LTR ERVL 13 175 -296 1445 148 12 130 chr18 2650344 2650683 -83338251 + LTR32 LTR ERVL 172 470 -1 223 286 0 0 chr18 2650684 2650740 -83338194 - MIR SINE MIR -181 81 26 424 285 44 22 chr18 2651400 2651537 -83337397 + MIR SINE MIR 47 186 -76 631 121 0 10 chr18 2652788 2652887 -83336047 + MER4A LTR ERV1 1 98 -566 1522 155 7 26 chr18 2652887 2653264 -83335670 + MER4A LTR ERV1 261 664 0 387 276 120 51 chr18 2653306 2653657 -83335277 + L1ME4a LINE L1 5588 5962 -159 259 280 74 34 chr18 2653691 2653866 -83335068 + L1ME4a LINE L1 5935 6116 -5 552 282 142 80 chr18 2653946 2654178 -83334756 + MLT1J LTR MaLR 1 217 -294 1871 117 0 4 chr18 2654178 2654435 -83334499 + AluSq SINE Alu 45 300 -13 552 282 142 80 chr18 2654435 2654653 -83334281 + MLT1J LTR MaLR 217 479 -32 22 35 0 0 chr18 2654738 2654767 -83334167 + AT_rich Low_complexity Low_complexity 1 29 0 506 171 54 47 chr18 2655968 2656097 -83332837 - MLT1I LTR MaLR -279 130 1 23 33 0 0 chr18 2656157 2656187 -83332747 + AT_rich Low_complexity Low_complexity 1 30 0 2151 104 0 32 chr18 2656217 2656525 -83332409 + AluY SINE Alu 1 298 -13 389 231 22 12 chr18 2656527 2656631 -83332303 - MIR SINE MIR -68 140 37 24 0 0 0 chr18 2657508 2657532 -83331402 + AT_rich Low_complexity Low_complexity 1 24 0 2960 281 87 46 chr18 2658146 2661330 -83327604 + L1MEc LINE L1 1567 4821 -1394 1079 194 0 28 chr18 2661330 2661546 -83327388 + MER6B DNA MER2_type 1 210 0 2960 281 87 46 chr18 2661546 2661645 -83327289 + L1MEc LINE L1 4821 4914 -1301 2339 154 52 7 chr18 2661649 2662057 -83326877 - MSTB LTR MaLR 0 426 1 1353 145 9 9 chr18 2662057 2662285 -83326649 - MSTB-int LTR MaLR 0 1651 1424 1855 287 109 38 chr18 2662291 2663438 -83325496 + L2 LINE L2 2044 3249 -64 302 204 21 65 chr18 2663442 2663628 -83325306 + (TTTA)n Simple_repeat Simple_repeat 2 179 0 186 43 0 0 chr18 2665570 2665593 -83323341 + (A)n Simple_repeat Simple_repeat 1 23 0 556 171 0 63 chr18 2666527 2666638 -83322296 + FLAM_A SINE Alu 18 121 -21 369 0 0 0 chr18 2666644 2666685 -83322249 + (TG)n Simple_repeat Simple_repeat 2 42 0 255 240 40 27 chr18 2666839 2666914 -83322020 + MIR SINE MIR 26 101 -161 230 347 61 10 chr18 2667380 2667478 -83321456 + MIR SINE MIR 43 145 -117 607 257 0 0 chr18 2667655 2667791 -83321143 - MIR SINE MIR -14 248 113 830 253 101 17 chr18 2668233 2668470 -83320464 + MIR SINE MIR 4 260 -2 1725 131 31 15 chr18 2668500 2668759 -83320175 - AluSq SINE Alu -50 263 1 198 313 75 45 chr18 2668827 2668894 -83320040 - L2 LINE L2 0 3272 3204 1912 129 11 4 chr18 2669833 2670154 -83318780 + AluSg SINE Alu 1 323 0 1403 156 26 121 chr18 2670769 2670988 -83317946 + L1MC1 LINE L1 5990 6159 -174 1611 141 9 77 chr18 2670988 2671314 -83317620 + AluJo SINE Alu 1 304 -8 1403 156 26 121 chr18 2671314 2671473 -83317461 + L1MC1 LINE L1 6159 6332 -1 183 263 35 0 chr18 2671885 2671942 -83316992 - MIR3 SINE MIR -39 169 111 456 283 103 66 chr18 2676151 2676636 -83312298 + L1ME3 LINE L1 62 564 -5555 612 274 89 68 chr18 2676974 2677100 -83311834 + L1ME3 LINE L1 2838 2960 -3169 2491 41 3 0 chr18 2677100 2677393 -83311541 + AluY SINE Alu 1 294 -17 612 274 89 68 chr18 2677393 2678514 -83310420 + L1ME3 LINE L1 2960 4111 -2018 720 248 123 92 chr18 2678525 2678980 -83309954 - MLT1J LTR MaLR 0 511 43 644 309 87 24 chr18 2679020 2679806 -83309128 + L1ME3 LINE L1 4133 4967 -1162 479 304 106 22 chr18 2679812 2680571 -83308363 + L1ME3 LINE L1 5019 5846 -299 1584 149 65 4 chr18 2681008 2681284 -83307650 - AluSx SINE Alu -15 297 5 231 298 44 9 chr18 2681410 2681524 -83307410 - L1MC/D LINE L1 -2003 5805 5688 23 0 0 0 chr18 2681842 2681865 -83307069 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr18 2681972 2681995 -83306939 + AT_rich Low_complexity Low_complexity 1 23 0 285 294 196 5 chr18 2683832 2684016 -83304918 + MIR SINE MIR 20 238 -24 916 111 23 6 chr18 2684032 2684204 -83304730 + (TAGA)n Simple_repeat Simple_repeat 2 176 0 1638 106 0 0 chr18 2684396 2684631 -83304303 + L1MA2 LINE L1 6070 6304 0 22 0 0 0 chr18 2684631 2684653 -83304281 + AT_rich Low_complexity Low_complexity 1 22 0 554 188 71 155 chr18 2684865 2685119 -83303815 + MIR SINE MIR 2 228 -34 219 351 81 56 chr18 2685577 2685973 -83302961 + L2 LINE L2 2572 2977 -337 249 33 0 0 chr18 2686423 2686453 -83302481 + (TTTTG)n Simple_repeat Simple_repeat 4 33 0 290 336 146 52 chr18 2686735 2687313 -83301621 + L2 LINE L2 133 822 -2492 3826 145 3 13 chr18 2687313 2687942 -83300992 - L1PA15 LINE L1 -7 6158 5536 290 336 146 52 chr18 2687942 2688235 -83300699 + L2 LINE L2 822 1086 -2228 409 339 133 24 chr18 2688339 2688929 -83300005 + L2 LINE L2 2625 3290 -23 534 326 64 13 chr18 2689132 2689365 -83299569 + MIR SINE MIR 12 256 -6 1899 134 0 11 chr18 2689966 2690250 -83298684 - AluSx SINE Alu 0 312 32 1261 170 89 68 chr18 2690267 2690649 -83298285 - MLT1B LTR MaLR 0 390 1 312 278 15 90 chr18 2691459 2691551 -83297383 - L2 LINE L2 -4 3268 3171 2339 66 0 20 chr18 2691551 2691853 -83297081 + AluSx SINE Alu 1 296 -16 2583 36 0 7 chr18 2691854 2692191 -83296743 + AluY SINE Alu 2 311 0 312 278 15 90 chr18 2692191 2692229 -83296705 - L2 LINE L2 -100 3172 3146 347 308 42 21 chr18 2692334 2692500 -83296434 - MIR SINE MIR -50 212 46 501 172 32 0 chr18 2693150 2693243 -83295691 - MER5B DNA MER1_type -16 162 67 3552 163 45 43 chr18 2693248 2693873 -83295061 - LTR8A LTR ERV1 0 727 98 2133 135 39 33 chr18 2693873 2694235 -83294699 + THE1B LTR MaLR 1 364 0 3552 163 45 43 chr18 2694235 2694334 -83294600 - LTR8A LTR ERV1 -629 98 1 204 322 17 0 chr18 2694339 2694398 -83294536 - MER5B DNA MER1_type -118 60 1 280 258 15 0 chr18 2694430 2694496 -83294438 + MER5A DNA MER1_type 40 106 -83 643 314 57 66 chr18 2695777 2695934 -83293000 + L2 LINE L2 2553 2710 -603 2142 121 7 0 chr18 2695934 2696223 -83292711 - AluSx SINE Alu -21 291 1 643 314 57 66 chr18 2696223 2696836 -83292098 + L2 LINE L2 2710 3310 -3 409 304 105 18 chr18 2697345 2697621 -83291313 + L1ME3A LINE L1 700 999 -5120 294 239 115 35 chr18 2697683 2697796 -83291138 + L1M4 LINE L1 5004 5125 -1021 782 294 88 19 chr18 2697801 2698701 -83290233 + L1ME3A LINE L1 4914 5894 -259 225 394 48 10 chr18 2699048 2699152 -83289782 - L2 LINE L2 -43 3229 3122 258 81 0 0 chr18 2700300 2700337 -83288597 + (CA)n Simple_repeat Simple_repeat 2 38 0 379 234 32 0 chr18 2700542 2700636 -83288298 + MER94 DNA DNA 35 131 -3 25 0 0 0 chr18 2701171 2701196 -83287738 + AT_rich Low_complexity Low_complexity 1 25 0 182 224 145 26 chr18 2701934 2702010 -83286924 + MIR3 SINE MIR 118 202 -6 799 249 115 5 chr18 2702538 2702747 -83286187 + MIR SINE MIR 2 233 -29 182 88 0 29 chr18 2702937 2702971 -83285963 + (TA)n Simple_repeat Simple_repeat 2 34 0 414 276 63 75 chr18 2704663 2704902 -83284032 - L2 LINE L2 0 3313 3078 277 250 36 12 chr18 2704956 2705040 -83283894 + MIR SINE MIR 4 89 -173 678 274 140 34 chr18 2705042 2705542 -83283392 - MLT1H1 LTR MaLR -2 553 1 476 283 92 0 chr18 2705546 2705698 -83283236 + MIR SINE MIR 89 254 -8 3052 161 37 2 chr18 2705823 2706358 -83282576 + MER41C LTR ERV1 1 554 0 235 0 0 0 chr18 2707335 2707361 -83281573 + (TTTG)n Simple_repeat Simple_repeat 3 104 0 1704 176 0 7 chr18 2707361 2707646 -83281288 - AluJo SINE Alu -1 308 1 357 176 54 0 chr18 2708671 2708745 -83280189 - MLT1H1 LTR MaLR -10 545 468 412 284 94 80 chr18 2709124 2709423 -83279511 - L3 LINE CR1 -85 1492 1190 1087 278 64 16 chr18 2710399 2710787 -83278147 - LTR16A LTR ERVL -23 427 21 213 39 0 0 chr18 2711430 2711456 -83277478 + (CA)n Simple_repeat Simple_repeat 2 27 0 188 257 129 0 chr18 2711708 2711778 -83277156 - L2 LINE L2 -8 3264 3186 315 85 0 0 chr18 2711796 2711843 -83277091 + (TG)n Simple_repeat Simple_repeat 2 48 0 769 176 81 18 chr18 2712719 2712940 -83275994 + Charlie5 DNA MER1_type 2390 2624 0 309 270 10 20 chr18 2712954 2713054 -83275880 + MIR SINE MIR 102 200 -62 374 251 80 68 chr18 2713982 2714145 -83274789 + L2 LINE L2 2895 3059 -213 396 345 7 0 chr18 2715285 2715433 -83273501 + MIR SINE MIR 106 254 -8 26 0 0 0 chr18 2716459 2716485 -83272449 + AT_rich Low_complexity Low_complexity 1 26 0 2355 107 0 3 chr18 2716537 2716845 -83272089 + AluSc SINE Alu 1 307 -2 22 0 0 0 chr18 2717726 2717748 -83271186 + AT_rich Low_complexity Low_complexity 1 22 0 4291 125 53 71 chr18 2717943 2718565 -83270369 + MER4E-int LTR ERV1 2073 2704 -4054 2343 111 0 3 chr18 2718565 2718871 -83270063 + AluSg SINE Alu 3 307 -3 4291 125 53 71 chr18 2718871 2718903 -83270031 + MER4E-int LTR ERV1 2704 2735 -4023 829 102 0 0 chr18 2718903 2719021 -83269913 + L1PA7 LINE L1 6034 6151 -3 4291 125 53 71 chr18 2719021 2719413 -83269521 + MER4E-int LTR ERV1 2735 3102 -3656 3365 138 72 22 chr18 2719398 2719453 -83269481 + MER4E-int LTR ERV1 3430 3481 -3277 * 2114 115 0 0 chr18 2719453 2719731 -83269203 + AluSp SINE Alu 1 278 -35 743 59 0 10 chr18 2719732 2719834 -83269100 + (GAAA)n Simple_repeat Simple_repeat 2 102 0 3365 138 72 22 chr18 2719834 2720404 -83268530 + MER4E-int LTR ERV1 3480 4088 -2670 * 4616 132 105 7 chr18 2720403 2721259 -83267675 + MER4E-int LTR ERV1 4452 5391 -1367 3755 135 13 11 chr18 2721302 2722201 -83266733 + MER4E-int LTR ERV1 5711 6645 -113 4614 123 61 4 chr18 2723050 2723787 -83265147 + MER4E LTR ERV1 1 779 0 2773 135 32 78 chr18 2723991 2724546 -83264388 - LTR26B LTR ERV1 0 531 2 281 350 49 0 chr18 2724808 2724931 -83264003 - L2 LINE L2 -1 3312 3184 241 242 0 61 chr18 2725126 2725192 -83263742 - MIR3 SINE MIR -21 187 126 223 185 37 37 chr18 2725343 2725397 -83263537 - MIR SINE MIR -122 140 87 3927 127 32 2 chr18 2725630 2726246 -83262688 + MER41B LTR ERV1 1 635 0 3322 121 11 37 chr18 2726822 2727367 -83261567 - LTR26B LTR ERV1 0 531 1 3167 108 51 6 chr18 2727774 2728263 -83260671 + MER9 LTR ERVK 1 511 0 1571 186 198 5 chr18 2728354 2728745 -83260189 + MLT2B1 LTR ERVL 2 487 -33 3835 142 31 2 chr18 2728745 2729379 -83259555 + MER39B LTR ERV1 1 653 0 1571 186 198 5 chr18 2729379 2729422 -83259512 + MLT2B1 LTR ERVL 487 520 0 222 341 116 7 chr18 2729691 2729829 -83259105 + L2 LINE L2 397 549 -2765 439 295 57 96 chr18 2729835 2730116 -83258818 + L2 LINE L2 3003 3272 0 285 284 82 34 chr18 2730778 2730937 -83257997 + MLT1I LTR MaLR 70 263 -249 373 162 26 27 chr18 2730990 2731104 -83257830 + MLT1I LTR MaLR 317 437 -13 1121 113 118 0 chr18 2731925 2732111 -83256823 - L1PA13 LINE L1 -2 6161 5954 336 252 88 44 chr18 2732321 2732480 -83256454 + MIR SINE MIR 97 262 0 1755 229 25 62 chr18 2732759 2733310 -83255624 + LTR26B LTR ERV1 1 531 0 503 291 77 28 chr18 2733468 2733715 -83255219 - MIR SINE MIR 0 262 4 277 324 55 35 chr18 2733742 2733887 -83255047 - MIR3 SINE MIR -10 198 51 249 33 0 0 chr18 2733994 2734024 -83254910 + (TC)n Simple_repeat Simple_repeat 1 30 0 213 360 16 24 chr18 2736149 2736274 -83252660 - MIR SINE MIR -50 212 89 2153 116 7 7 chr18 2737202 2737503 -83251431 + AluSx SINE Alu 1 301 -11 1974 138 0 14 chr18 2737779 2738097 -83250837 - AluSx SINE Alu 0 318 5 318 26 0 0 chr18 2738904 2738943 -83249991 + (CA)n Simple_repeat Simple_repeat 2 40 0 216 200 0 0 chr18 2738943 2738993 -83249941 + (ATGGTG)n Simple_repeat Simple_repeat 2 51 0 1472 152 96 0 chr18 2739866 2740168 -83248766 + L1MC2 LINE L1 5734 6064 -280 1840 202 92 83 chr18 2740168 2740906 -83248028 + LTR1B LTR ERV1 1 745 -81 470 263 83 0 chr18 2740961 2741094 -83247840 + LTR28 LTR ERV1 866 1009 -11 1307 223 0 4 chr18 2741105 2741379 -83247555 + L1MC1 LINE L1 6056 6328 -5 638 251 68 14 chr18 2741583 2741790 -83247144 - LTR16A LTR ERVL -103 347 130 286 291 109 76 chr18 2741952 2742005 -83246929 + L1ME LINE L1 5008 5058 -1088 1970 124 14 0 chr18 2742005 2742280 -83246654 + AluSx SINE Alu 24 302 -10 286 291 109 76 chr18 2742280 2742436 -83246498 + L1ME LINE L1 5058 5224 -922 642 262 100 15 chr18 2742574 2742845 -83246089 + L1ME LINE L1 5358 5651 -519 416 239 6 78 chr18 2743575 2743755 -83245179 - MER104 DNA Tc2 -12 168 2 355 196 38 15 chr18 2744442 2744575 -83244359 + A-rich Low_complexity Low_complexity 3 138 0 193 237 136 0 chr18 2745208 2745267 -83243667 - MIR3 SINE MIR -17 191 125 494 224 152 24 chr18 2745376 2745541 -83243393 - MER5A DNA MER1_type 0 189 4 441 270 108 44 chr18 2745759 2745963 -83242971 - MIR SINE MIR -43 219 3 2473 85 3 0 chr18 2750462 2750768 -83238166 - AluSc SINE Alu -2 307 1 342 298 85 47 chr18 2750789 2751024 -83237910 - LTR16A1 LTR ERVL 0 457 214 789 198 60 0 chr18 2752094 2752261 -83236673 - MER58A DNA MER1_type -5 219 43 310 269 23 108 chr18 2752471 2752601 -83236333 + L2 LINE L2 3172 3290 -23 21 0 0 0 chr18 2752726 2752747 -83236187 + AT_rich Low_complexity Low_complexity 1 21 0 2141 130 3 3 chr18 2753000 2753307 -83235627 - AluSx SINE Alu -5 307 1 664 282 24 6 chr18 2753672 2753842 -83235092 - MER5B DNA MER1_type 0 178 6 532 338 105 29 chr18 2754149 2754709 -83234225 + L1MEd LINE L1 596 1198 -4921 2290 113 0 6 chr18 2757959 2758270 -83230664 + AluSq SINE Alu 3 311 -2 219 359 169 34 chr18 2758656 2759040 -83229894 - L2 LINE L2 -362 2952 2517 1917 156 64 0 chr18 2759844 2760171 -83228763 + MER7A DNA MER2_type 1 346 0 425 319 9 9 chr18 2760182 2760298 -83228636 + L2 LINE L2 3177 3292 -21 1426 94 0 0 chr18 2760835 2761016 -83227918 - AluSc SINE Alu -128 181 1 1375 199 15 114 chr18 2761705 2762162 -83226772 + MLT1D LTR MaLR 91 502 -3 901 231 30 10 chr18 2762244 2762447 -83226487 - MER6B DNA MER2_type -3 207 1 1939 138 141 16 chr18 2763714 2764091 -83224843 - MSTA LTR MaLR -4 424 1 233 56 0 28 chr18 2764743 2764779 -83224155 + (TAAAAA)n Simple_repeat Simple_repeat 2 36 0 867 335 60 42 chr18 2764902 2765353 -83223581 - L2 LINE L2 0 3272 2814 477 309 47 21 chr18 2765544 2765735 -83223199 - L2 LINE L2 -892 2422 2227 634 281 102 69 chr18 2765744 2766078 -83222856 - LTR67 LTR ERVL -24 533 189 1202 233 132 20 chr18 2766988 2767344 -83221590 - MSTD LTR MaLR 0 396 1 1797 96 8 0 chr18 2767648 2767888 -83221046 - AluSg/x SINE Alu 0 310 69 785 178 38 22 chr18 2768099 2768284 -83220650 + MER53 DNA DNA 1 188 -1 645 283 74 22 chr18 2768825 2769094 -83219840 + L2 LINE L2 3020 3302 -11 330 240 202 10 chr18 2770194 2770298 -83218636 + L2 LINE L2 3190 3313 0 1837 35 0 4 chr18 2771193 2771421 -83217513 + L1PA4 LINE L1 5926 6152 -3 225 0 0 0 chr18 2771431 2771456 -83217478 + (CA)n Simple_repeat Simple_repeat 2 26 0 230 81 27 0 chr18 2771577 2771614 -83217320 + (CAAAAA)n Simple_repeat Simple_repeat 5 42 0 397 266 69 9 chr18 2771937 2772098 -83216836 - L1ME3A LINE L1 -318 5852 5680 261 303 18 18 chr18 2772622 2772731 -83216203 + L1ME LINE L1 351 459 -5937 3433 236 83 30 chr18 2773410 2775056 -83213878 + L1ME LINE L1 770 2516 -3890 2631 259 32 15 chr18 2775072 2776052 -83212882 + L1ME LINE L1 2562 3557 -2849 1670 65 0 5 chr18 2776783 2776998 -83211936 + L1P4 LINE L1 5448 5661 -507 2650 92 8 21 chr18 2776998 2777319 -83211615 + THE1C LTR MaLR 1 318 -57 419 137 55 0 chr18 2777319 2777392 -83211542 + MADE1 DNA Mariner 2 78 -2 2650 92 8 21 chr18 2777392 2777450 -83211484 + THE1C LTR MaLR 318 375 0 3457 92 22 10 chr18 2777450 2777950 -83210984 + L1PA13 LINE L1 5657 6162 -1 31 0 0 0 chr18 2778466 2778497 -83210437 + AT_rich Low_complexity Low_complexity 1 31 0 258 353 78 17 chr18 2778637 2778869 -83210065 + L3 LINE CR1 126 371 -1206 580 327 54 30 chr18 2778895 2779231 -83209703 + L2 LINE L2 2970 3313 0 379 321 179 47 chr18 2779233 2779641 -83209293 - L3 LINE CR1 -9 1568 1107 415 302 67 7 chr18 2779879 2780028 -83208906 - L3 LINE CR1 -578 999 842 411 331 169 10 chr18 2780231 2780539 -83208395 + L3 LINE CR1 887 1243 -334 194 274 39 0 chr18 2780658 2780709 -83208225 + MIR SINE MIR 80 132 -130 * 220 264 282 18 chr18 2780707 2780817 -83208117 - L2 LINE L2 0 3272 3134 392 364 26 7 chr18 2780910 2781061 -83207873 + L3 LINE CR1 1387 1540 -37 490 266 67 77 chr18 2781604 2782085 -83206849 + L1MC5 LINE L1 7310 7785 -176 362 293 57 8 chr18 2782987 2783110 -83205824 + L2 LINE L2 3185 3313 0 1440 111 11 0 chr18 2783116 2783305 -83205629 + AluSc SINE Alu 87 277 -32 459 0 0 0 chr18 2783305 2783356 -83205578 + (TAAA)n Simple_repeat Simple_repeat 1 51 0 275 120 0 11 chr18 2783414 2783470 -83205464 - MLT2B1 LTR ERVL -340 57 4 610 167 0 0 chr18 2783570 2783666 -83205268 + MLT2B2 LTR ERVL 349 444 -71 366 159 0 0 chr18 2783683 2783752 -83205182 + (TA)n Simple_repeat Simple_repeat 1 69 0 353 140 0 0 chr18 2783752 2783809 -83205125 + MLT2B1 LTR ERVL 464 520 0 233 220 11 99 chr18 2783858 2783949 -83204985 + L1ME3 LINE L1 5978 6060 -102 24 32 0 0 chr18 2784045 2784076 -83204858 + AT_rich Low_complexity Low_complexity 1 31 0 1789 296 85 19 chr18 2786051 2787319 -83201615 - L1ME3A LINE L1 -168 6002 4652 992 340 38 25 chr18 2788080 2788553 -83200381 + L1M3c LINE L1 141 619 -5662 2462 215 33 54 chr18 2788559 2788812 -83200122 + L1M3c LINE L1 951 1208 -5143 1796 183 3 0 chr18 2788812 2789123 -83199811 + AluJb SINE Alu 1 312 0 2462 215 33 54 chr18 2789123 2789227 -83199707 + L1M3c LINE L1 1208 1313 -5038 1945 146 3 0 chr18 2789227 2789515 -83199419 + AluSq SINE Alu 1 289 -24 2462 215 33 54 chr18 2789515 2790214 -83198720 + L1M3c LINE L1 1313 1986 -4365 3672 101 0 2 chr18 2790230 2790743 -83198191 + L1PB1 LINE L1 5640 6151 0 431 247 25 118 chr18 2790933 2791057 -83197877 + L1M1 LINE L1 2898 3032 -4533 7639 65 30 2 chr18 2791057 2791353 -83197581 - LTR13 LTR ERVK 0 1007 721 212 0 36 0 chr18 2791353 2791381 -83197553 + (GA)n Simple_repeat Simple_repeat 2 30 0 7639 65 30 2 chr18 2791381 2792061 -83196873 - LTR13 LTR ERVK -286 721 4 1887 110 65 0 chr18 2792061 2792324 -83196610 - AluSp SINE Alu -33 280 1 431 247 25 118 chr18 2792324 2792554 -83196380 + L1M1 LINE L1 3030 3220 -4345 454 108 14 0 chr18 2792597 2792671 -83196263 + L1MA10 LINE L1 6253 6327 -7 27 29 0 0 chr18 2792671 2792705 -83196229 + AT_rich Low_complexity Low_complexity 1 34 0 308 304 109 26 chr18 2792724 2793186 -83195748 + L1ME3A LINE L1 1003 1528 -4868 793 280 0 0 chr18 2793186 2793361 -83195573 + FAM SINE Alu 1 175 0 308 304 109 26 chr18 2793361 2793506 -83195428 + L1ME3A LINE L1 1528 1660 -4736 21 36 0 0 chr18 2793638 2793666 -83195268 + AT_rich Low_complexity Low_complexity 1 28 0 225 139 0 0 chr18 2794083 2794126 -83194808 + (T)n Simple_repeat Simple_repeat 1 43 0 1329 274 59 21 chr18 2795036 2795925 -83193009 + L1ME3A LINE L1 2456 5318 -897 342 218 0 0 chr18 2795931 2796009 -83192925 + L1ME3A LINE L1 5460 5537 -702 570 235 49 49 chr18 2796015 2796219 -83192715 + L1ME3A LINE L1 6035 6238 -1 465 283 59 32 chr18 2798381 2798516 -83190418 + L2 LINE L2 2287 2432 -882 2563 127 102 2 chr18 2798516 2798957 -83189977 - LTR19A LTR ERV1 0 486 2 465 283 59 32 chr18 2798957 2799040 -83189894 + L2 LINE L2 2432 2511 -803 369 0 0 0 chr18 2801091 2801132 -83187802 + (CA)n Simple_repeat Simple_repeat 2 42 0 1526 154 0 0 chr18 2802002 2802236 -83186698 - AluJo SINE Alu -46 266 33 226 264 83 14 chr18 2802403 2802475 -83186459 - MLT1J LTR MaLR -432 79 3 509 267 49 80 chr18 2802564 2802664 -83186270 - MIR SINE MIR -27 235 133 2163 105 0 14 chr18 2802664 2802960 -83185974 - AluSx SINE Alu -20 292 1 509 267 49 80 chr18 2802960 2803084 -83185850 - MIR SINE MIR -129 133 18 268 316 165 39 chr18 2803781 2803987 -83184947 - L2 LINE L2 -9 3263 3032 1371 211 66 37 chr18 2804323 2804702 -83184232 - MLT1D LTR MaLR -115 390 1 8905 154 45 5 chr18 2805497 2808023 -83180911 + L1PB1 LINE L1 1297 3924 -2938 41106 29 22 3 chr18 2808025 2814054 -83174880 + L1PA2 LINE L1 1 6151 -4 8939 188 19 2 chr18 2814040 2817014 -83171920 + L1PB1 LINE L1 3843 6865 -2 * 350 310 88 93 chr18 2817089 2817453 -83171481 - L2 LINE L2 -5 3267 2906 2811 169 36 55 chr18 2817778 2818470 -83170464 + L1MA8 LINE L1 5613 6291 0 1619 154 53 36 chr18 2819065 2819421 -83169513 - THE1C LTR MaLR -10 365 4 330 246 53 35 chr18 2819906 2820020 -83168914 + L2 LINE L2 2096 2211 -1103 410 321 97 20 chr18 2820240 2820589 -83168345 + L1M4 LINE L1 2457 2832 -3314 329 396 24 28 chr18 2820713 2820925 -83168009 + L1MEd LINE L1 10 220 -5899 387 300 76 38 chr18 2821598 2821861 -83167073 + L1M4 LINE L1 3791 4063 -2083 476 170 245 0 chr18 2822004 2822110 -83166824 - FLAM_A SINE Alu 0 133 2 935 338 119 15 chr18 2822115 2822893 -83166041 + L2 LINE L2 2451 3309 -4 451 248 425 0 chr18 2822900 2823126 -83165808 + MER5C DNA MER1_type 2 323 -1 212 344 70 23 chr18 2823184 2823312 -83165622 - L2 LINE L2 0 3313 3180 1870 174 0 7 chr18 2823424 2823734 -83165200 + AluJo SINE Alu 1 308 -4 521 280 68 17 chr18 2824010 2824246 -83164688 + MLT1I LTR MaLR 114 361 -48 1196 201 38 44 chr18 2825164 2825503 -83163431 + MLT1A1 LTR MaLR 29 365 0 2065 130 0 40 chr18 2825882 2826205 -83162729 - AluSx SINE Alu -1 311 2 2517 122 28 25 chr18 2826267 2826700 -83162234 + Tigger2a DNA MER2_type 1 434 0 24 0 0 0 chr18 2827270 2827294 -83161640 + AT_rich Low_complexity Low_complexity 1 24 0 214 259 0 19 chr18 2827528 2827582 -83161352 + GA-rich Low_complexity Low_complexity 2 54 0 343 289 79 18 chr18 2827861 2827975 -83160959 - L2 LINE L2 -25 3288 3168 429 301 139 0 chr18 2828312 2828485 -83160449 + MIR SINE MIR 56 252 -10 287 210 67 109 chr18 2829873 2829944 -83158990 - MIR SINE MIR -108 154 88 2399 76 0 0 chr18 2829944 2830246 -83158688 - AluY SINE Alu -3 308 7 287 210 67 109 chr18 2830246 2830293 -83158641 - MIR SINE MIR -174 88 41 274 369 39 0 chr18 2830538 2830668 -83158266 - MIR SINE MIR -108 154 20 1305 254 16 22 chr18 2831641 2832007 -83156927 + MLT1A1 LTR MaLR 1 364 -1 32 81 0 0 chr18 2832572 2832646 -83156288 + AT_rich Low_complexity Low_complexity 1 74 0 411 282 153 24 chr18 2832686 2832895 -83156039 - MIR SINE MIR -26 236 1 350 271 121 39 chr18 2832903 2833110 -83155824 + L1ME LINE L1 5563 5786 -335 799 158 0 64 chr18 2833837 2834008 -83154926 + L1PB4 LINE L1 5997 6156 0 209 316 61 0 chr18 2834234 2834332 -83154602 - L2 LINE L2 -641 2673 2570 213 287 158 20 chr18 2834367 2834468 -83154466 + L2 LINE L2 3197 3311 -2 2276 140 62 2 chr18 2834506 2834906 -83154028 - MSTA LTR MaLR -4 424 1 2217 110 0 0 chr18 2835877 2836167 -83152767 - AluSg SINE Alu -20 290 1 21 0 0 0 chr18 2836185 2836206 -83152728 + AT_rich Low_complexity Low_complexity 1 21 0 2224 104 0 16 chr18 2836754 2837061 -83151873 + AluSx SINE Alu 1 302 -10 375 267 0 0 chr18 2837773 2837863 -83151071 + L1MC4 LINE L1 6614 6703 -1339 305 244 49 0 chr18 2837894 2837976 -83150958 - L1MC4 LINE L1 -1340 6702 6617 200 238 0 0 chr18 2837977 2838019 -83150915 + (TA)n Simple_repeat Simple_repeat 2 43 0 186 43 0 0 chr18 2838230 2838253 -83150681 + (TA)n Simple_repeat Simple_repeat 2 24 0 265 324 28 9 chr18 2838793 2838901 -83150033 - MIR SINE MIR -107 155 46 267 291 39 0 chr18 2838936 2839039 -83149895 + MIR SINE MIR 104 210 -52 1525 192 3 0 chr18 2839044 2839336 -83149598 - L1MB1 LINE L1 -120 6069 5777 1392 139 12 28 chr18 2839367 2839619 -83149315 + L1MA10 LINE L1 6080 6327 -7 247 279 48 48 chr18 2839660 2839764 -83149170 - L2 LINE L2 -1 3271 3168 2212 80 0 0 chr18 2839973 2840249 -83148685 + AluSc SINE Alu 21 296 -13 21 36 0 0 chr18 2840255 2840283 -83148651 + AT_rich Low_complexity Low_complexity 1 28 0 2223 111 0 10 chr18 2841604 2841902 -83147032 + AluSx SINE Alu 1 295 -17 1720 219 11 0 chr18 2842501 2842880 -83146054 - MER89 LTR ERV1 -2 557 175 363 148 25 12 chr18 2842907 2842988 -83145946 - MER89 LTR ERV1 -477 82 1 1864 152 24 7 chr18 2843043 2843340 -83145594 - AluJb SINE Alu -5 307 6 2268 108 10 0 chr18 2843681 2843988 -83144946 - AluSp SINE Alu -3 310 1 195 257 59 37 chr18 2844138 2844274 -83144660 + L2 LINE L2 2738 2876 -438 212 313 45 0 chr18 2844638 2844705 -83144229 + MIR SINE MIR 111 180 -82 208 247 99 37 chr18 2844850 2844931 -83144003 - MIR SINE MIR -73 189 104 946 285 81 67 chr18 2845866 2846003 -83142931 - MER115 DNA AcHobo 0 693 559 2479 56 0 7 chr18 2846003 2846306 -83142628 - AluY SINE Alu -10 301 1 946 285 81 67 chr18 2846306 2846660 -83142274 - MER115 DNA AcHobo -134 559 195 577 283 109 18 chr18 2846663 2846939 -83141995 - MER115 DNA AcHobo -379 314 14 6087 93 8 0 chr18 2847401 2848785 -83140149 - L1PA13 LINE L1 0 6163 4784 10116 208 40 10 chr18 2848789 2852758 -83136176 - L1PB1 LINE L1 0 6867 2620 2129 118 109 0 chr18 2852759 2853099 -83135835 + MER51B LTR ERV1 1 377 0 2659 83 25 18 chr18 2853103 2853500 -83135434 + MER51B-int LTR ERV1 5 404 -7412 263 150 62 0 chr18 2853507 2853587 -83135347 + (TA)n Simple_repeat Simple_repeat 2 86 0 386 123 62 0 chr18 2853590 2853655 -83135279 + MER51B-int LTR ERV1 423 491 -7325 2545 160 21 5 chr18 2853658 2854214 -83134720 - L1PB1 LINE L1 -5062 1801 1093 3527 208 93 8 chr18 2854217 2855177 -83133757 - L1PB1 LINE L1 -5817 1046 6 7198 162 7 8 chr18 2855192 2856535 -83132399 - L1P LINE L1 -1346 4800 3460 5175 134 25 8 chr18 2856529 2857473 -83131461 + L1MA5A LINE L1 5331 6290 -7 * 6158 186 24 32 chr18 2857482 2857628 -83131306 + L1MC1 LINE L1 4156 4302 -2031 2300 149 20 10 chr18 2857628 2858023 -83130911 + MER57A LTR ERV1 1 399 -4 6158 186 24 32 chr18 2858023 2858196 -83130738 + L1MC1 LINE L1 4302 4475 -1858 1700 109 0 4 chr18 2858196 2858425 -83130509 + AluSg/x SINE Alu 83 310 0 6158 186 24 32 chr18 2858425 2860312 -83128622 + L1MC1 LINE L1 4475 6332 -1 325 299 47 0 chr18 2860321 2860428 -83128506 + L1MDa LINE L1 1574 1685 -4855 2289 122 3 0 chr18 2860475 2860787 -83128147 + AluSq SINE Alu 1 313 0 818 221 20 39 chr18 2860823 2861122 -83127812 + L1M1 LINE L1 3469 3799 -3900 1534 192 49 88 chr18 2861772 2862283 -83126651 + MLT1D LTR MaLR 7 497 -8 2994 163 140 28 chr18 2862672 2863392 -83125542 + L1MB4 LINE L1 5335 6135 -45 271 268 175 41 chr18 2863425 2863522 -83125412 - L2 LINE L2 -1 3271 3162 2181 142 99 67 chr18 2863725 2864275 -83124659 + LTR10A LTR ERV1 1 612 -21 1806 137 11 15 chr18 2864367 2864638 -83124296 + AluJb SINE Alu 38 307 -5 242 247 21 86 chr18 2866965 2867058 -83121876 - MIR SINE MIR -97 111 25 239 274 19 0 chr18 2868359 2868465 -83120469 + L1ME4a LINE L1 6010 6117 -4 1999 177 98 3 chr18 2868582 2868971 -83119963 + MSTB LTR MaLR 1 426 0 275 0 29 0 chr18 2869030 2869065 -83119869 + (TC)n Simple_repeat Simple_repeat 1 36 0 347 195 297 17 chr18 2869626 2869744 -83119190 + MER5A DNA MER1_type 39 189 0 575 259 91 20 chr18 2870303 2870500 -83118434 - MIR SINE MIR -3 259 49 209 342 128 7 chr18 2871235 2871384 -83117550 + MIR SINE MIR 86 252 -10 2467 195 38 4 chr18 2871778 2872300 -83116634 + LTR9B LTR ERV1 105 644 0 1770 141 89 0 chr18 2872367 2872637 -83116297 + AluJb SINE Alu 3 296 -16 207 0 0 0 chr18 2872637 2872660 -83116274 + (TA)n Simple_repeat Simple_repeat 1 23 0 346 179 53 42 chr18 2872980 2873065 -83115869 + MER34C LTR ERV1 37 125 -460 1597 201 0 49 chr18 2873065 2873389 -83115545 + AluJo SINE Alu 1 308 -4 231 204 0 0 chr18 2873408 2873457 -83115477 + GA-rich Low_complexity Low_complexity 1 49 0 2961 149 8 0 chr18 2873457 2873959 -83114975 + MER34B LTR ERV1 60 565 0 635 233 7 0 chr18 2874447 2874593 -83114341 + L1MD3 LINE L1 6696 6842 -1153 540 264 21 10 chr18 2874839 2875032 -83113902 + L1MD3 LINE L1 7775 7969 -26 1566 208 15 23 chr18 2876035 2876434 -83112500 + L1MB3 LINE L1 4523 4918 -1228 1141 196 4 4 chr18 2876434 2876669 -83112265 + L1MB3 LINE L1 5621 5855 -328 25 51 0 0 chr18 2876703 2876742 -83112192 + AT_rich Low_complexity Low_complexity 1 39 0 1714 177 20 0 chr18 2876742 2877042 -83111892 - L1PA16 LINE L1 -13 6153 5848 1088 128 21 5 chr18 2877042 2877229 -83111705 + L1MB3 LINE L1 5845 6034 -149 397 39 0 0 chr18 2877329 2877381 -83111553 - MER51B LTR ERV1 -323 54 3 298 254 217 81 chr18 2877383 2877671 -83111263 - L2 LINE L2 -32 3240 2886 3114 165 17 4 chr18 2877671 2878210 -83110724 - MER44D DNA MER2_type -3 602 2 298 254 217 81 chr18 2878210 2878303 -83110631 - L2 LINE L2 -386 2886 2807 15863 30 4 0 chr18 2879444 2881550 -83107384 - L1P2 LINE L1 -644 5511 3399 5449 176 25 31 chr18 2881650 2882182 -83106752 - L1M1 LINE L1 -5663 1902 1378 2175 74 17 30 chr18 2882182 2882481 -83106453 + AluSp SINE Alu 16 310 -3 5449 176 25 31 chr18 2882481 2883010 -83105924 - L1M1 LINE L1 -6187 1378 847 23 0 0 0 chr18 2883118 2883141 -83105793 + AT_rich Low_complexity Low_complexity 1 23 0 448 270 44 15 chr18 2883308 2883445 -83105489 - MIR SINE MIR -89 173 33 547 199 6 68 chr18 2884260 2884421 -83104513 + L1ME3 LINE L1 5924 6074 -88 345 314 51 0 chr18 2886254 2886372 -83102562 + MIR SINE MIR 38 161 -101 * 558 248 140 28 chr18 2886367 2886581 -83102353 - MIR SINE MIR 0 262 25 229 313 27 27 chr18 2886531 2886643 -83102291 + MIR SINE MIR 130 241 -21 * 1085 244 10 0 chr18 2886927 2887235 -83101699 - L1MA4 LINE L1 -1 6299 5989 1915 62 22 15 chr18 2887777 2888050 -83100884 + LTR30 LTR ERV1 1 275 -447 2382 80 0 3 chr18 2888180 2888481 -83100453 - AluSq SINE Alu -13 300 1 288 0 0 0 chr18 2889842 2889874 -83099060 + (CA)n Simple_repeat Simple_repeat 2 33 0 796 283 24 60 chr18 2889893 2890062 -83098872 - MIR SINE MIR 0 262 103 2358 96 0 0 chr18 2890062 2890355 -83098579 - AluSx SINE Alu -17 295 3 796 283 24 60 chr18 2890355 2890436 -83098498 - MIR SINE MIR -159 103 21 198 0 0 0 chr18 2890526 2890548 -83098386 + (TTA)n Simple_repeat Simple_repeat 3 24 0 4921 35 2 0 chr18 2890548 2891128 -83097806 - L1PA3 LINE L1 -18 6137 5557 913 44 0 0 chr18 2891128 2891242 -83097692 + L1P LINE L1 4820 4933 -1213 21 0 0 0 chr18 2892598 2892619 -83096315 + AT_rich Low_complexity Low_complexity 1 21 0 233 234 103 9 chr18 2892635 2892742 -83096192 - L1ME4a LINE L1 -15 6106 5990 492 300 56 35 chr18 2892921 2892954 -83095980 + MLT1G1 LTR MaLR 1 32 -563 2964 107 9 5 chr18 2892954 2893386 -83095548 - MER57B LTR ERV1 0 434 1 492 300 56 35 chr18 2893386 2893629 -83095305 + MLT1G1 LTR MaLR 32 328 -267 280 233 44 11 chr18 2893711 2893801 -83095133 + MLT1H1 LTR MaLR 463 590 0 412 316 39 12 chr18 2893824 2894080 -83094854 - L1ME4a LINE L1 -287 5834 5572 216 365 83 16 chr18 2894500 2894692 -83094242 - L2 LINE L2 -56 3216 3012 228 235 20 0 chr18 2895598 2895649 -83093285 + CT-rich Low_complexity Low_complexity 1 52 0 2167 125 0 0 chr18 2896571 2896866 -83092068 - AluSq SINE Alu -18 295 1 1783 162 61 29 chr18 2896985 2897523 -83091411 + MLT2A2 LTR ERVL 1 554 0 22 0 0 0 chr18 2897703 2897725 -83091209 + AT_rich Low_complexity Low_complexity 1 22 0 272 292 34 22 chr18 2897792 2897881 -83091053 - MIR SINE MIR -120 142 53 1537 152 22 90 chr18 2898755 2899078 -83089856 - AluJo SINE Alu -7 305 5 346 266 2 23 chr18 2899144 2899257 -83089677 - MIR3 SINE MIR -45 163 82 1823 171 9 22 chr18 2899679 2899995 -83088939 + AluJo SINE Alu 1 312 0 431 233 93 20 chr18 2900216 2900366 -83088568 + MER58A DNA MER1_type 9 169 -55 2523 171 14 0 chr18 2900725 2901145 -83087789 + MSTB LTR MaLR 1 426 0 1005 297 155 10 chr18 2901507 2902251 -83086683 - L2 LINE L2 0 3313 2458 377 264 139 26 chr18 2902381 2902684 -83086250 + L1MC4a LINE L1 5899 6235 -1573 2234 102 3 26 chr18 2902831 2903134 -83085800 - AluSx SINE Alu -16 296 1 780 251 96 73 chr18 2903364 2903715 -83085219 + L1MC5 LINE L1 6632 7002 -959 1693 189 144 40 chr18 2903715 2904186 -83084748 - MLT2B1 LTR ERVL 0 520 1 780 251 96 73 chr18 2904186 2904396 -83084538 + L1MC5 LINE L1 7002 7206 -755 897 228 22 5 chr18 2904396 2904620 -83084314 + MER58 DNA MER1_type 1 228 -113 257 167 0 0 chr18 2904745 2904793 -83084141 - MER5C DNA MER1_type -200 124 77 2140 141 0 0 chr18 2905071 2905370 -83083564 - AluSx SINE Alu -8 304 6 5164 140 10 15 chr18 2905640 2906516 -83082418 + Tigger1 DNA MER2_type 1 872 -1546 4081 161 10 4 chr18 2906524 2907215 -83081719 + MER50 LTR ERV1 17 711 -23 8766 139 33 2 chr18 2907215 2908719 -83080215 + Tigger1 DNA MER2_type 868 2418 0 603 220 47 37 chr18 2909942 2910133 -83078801 + LTR45B LTR ERV1 296 488 -1 433 314 31 35 chr18 2910553 2910811 -83078123 - L2 LINE L2 -2409 905 649 723 162 0 0 chr18 2911503 2911620 -83077314 + AluSg/x SINE Alu 193 309 0 236 240 83 62 chr18 2911744 2911840 -83077094 - MLT1K LTR MaLR -371 217 120 1734 164 29 0 chr18 2912626 2912907 -83076027 + AluJb SINE Alu 1 289 -23 190 393 17 8 chr18 2915404 2915521 -83073413 + MIR SINE MIR 18 135 -127 1538 186 3 47 chr18 2917140 2917457 -83071477 + AluJb SINE Alu 5 307 -5 1330 217 37 34 chr18 2917574 2917956 -83070978 + L1M4 LINE L1 3775 4157 -1989 2256 101 3 0 chr18 2918012 2918309 -83070625 + AluY SINE Alu 1 298 -13 182 266 38 63 chr18 2918858 2918937 -83069997 - L2 LINE L2 -6 3307 3231 394 256 53 0 chr18 2919081 2919214 -83069720 + MER117 DNA MER1_type 1 140 -57 23 33 0 0 chr18 2920279 2920309 -83068625 + AT_rich Low_complexity Low_complexity 1 30 0 301 354 123 12 chr18 2921222 2921465 -83067469 - L2 LINE L2 -77 3195 2926 381 356 70 30 chr18 2921517 2921787 -83067147 - L2 LINE L2 -470 2844 2564 294 50 0 0 chr18 2921961 2922001 -83066933 + (TG)n Simple_repeat Simple_repeat 2 41 0 2016 107 52 0 chr18 2922253 2922598 -83066336 - LTR30 LTR ERV1 -1 721 359 1795 159 3 20 chr18 2923145 2923440 -83065494 - AluJo SINE Alu -19 293 4 288 0 0 0 chr18 2923797 2923829 -83065105 + (TAGA)n Simple_repeat Simple_repeat 2 33 0 939 246 23 19 chr18 2923880 2924144 -83064790 + MLT1L LTR MaLR 8 272 -343 355 87 29 0 chr18 2924154 2924223 -83064711 + (CAAA)n Simple_repeat Simple_repeat 2 72 0 431 306 95 26 chr18 2924582 2924814 -83064120 + MIR SINE MIR 14 261 -1 2159 165 26 53 chr18 2924899 2925390 -83063544 - MER34B LTR ERV1 -77 488 11 6484 132 8 12 chr18 2926993 2928407 -83060527 + L1MA3 LINE L1 4887 6298 -7 381 196 24 173 chr18 2928436 2928604 -83060330 - LTR54 LTR ERV1 -229 281 139 257 179 18 0 chr18 2928595 2928651 -83060283 + LTR54 LTR ERV1 75 131 -379 * 415 165 0 24 chr18 2928720 2928805 -83060129 - LTR54B LTR ERV1 -415 83 1 1972 131 81 31 chr18 2928891 2929272 -83059662 + MSTA LTR MaLR 1 400 -28 2644 108 3 6 chr18 2929448 2929810 -83059124 - THE1B LTR MaLR -3 361 1 246 312 147 0 chr18 2930203 2930312 -83058622 + L2 LINE L2 3189 3313 0 634 233 17 6 chr18 2930369 2930546 -83058388 + MLT1E LTR MaLR 1 180 -387 289 136 0 0 chr18 2930547 2930591 -83058343 + MSTA LTR MaLR 385 428 0 9858 152 33 11 chr18 2931901 2933652 -83055282 - ERVL LTR ERVL -1458 4306 2517 597 311 43 0 chr18 2933652 2933906 -83055028 + L1MC4a LINE L1 5598 5862 -1946 264 132 0 19 chr18 2934072 2934125 -83054809 - MLT2B1 LTR ERVL -8 512 461 363 291 57 13 chr18 2934474 2934632 -83054302 + LTR16C LTR ERVL 327 491 0 463 220 139 19 chr18 2934743 2934952 -83053982 + L1MC5 LINE L1 7303 7536 -425 237 226 161 20 chr18 2935012 2935211 -83053723 + L1MC5 LINE L1 7634 7860 -101 991 216 38 0 chr18 2935555 2935791 -83053143 - L1 LINE L1 -978 5168 4924 210 284 0 30 chr18 2936060 2936127 -83052807 - MIR SINE MIR -12 250 186 1906 153 5 79 chr18 2936239 2936658 -83052276 - MLT1B LTR MaLR 0 390 3 216 0 0 0 chr18 2937379 2937403 -83051531 + (CA)n Simple_repeat Simple_repeat 1 24 0 327 211 0 0 chr18 2937878 2937949 -83050985 + MER116 DNA Mariner 9 79 -1 269 295 74 0 chr18 2940492 2940587 -83048347 - MIR SINE MIR -8 254 153 263 297 55 8 chr18 2940728 2940856 -83048078 - MLT1K LTR MaLR -151 437 304 239 245 61 0 chr18 2940934 2941032 -83047902 + L1M4 LINE L1 5041 5144 -1002 1015 181 46 23 chr18 2941226 2941539 -83047395 - L1ME LINE L1 -659 5507 5176 802 171 20 45 chr18 2941541 2941740 -83047194 - L1ME LINE L1 -1109 5037 4844 1530 183 36 57 chr18 2941745 2942133 -83046801 + MLT1B LTR MaLR 11 390 0 654 227 62 0 chr18 2942133 2942327 -83046607 - L1ME LINE L1 -1298 4848 4643 1696 32 0 27 chr18 2942430 2942650 -83046284 - L1PA2 LINE L1 0 6155 5942 1790 91 0 0 chr18 2943066 2943297 -83045637 - AluSg/x SINE Alu -12 297 67 611 193 50 7 chr18 2943540 2943680 -83045254 + MLT1C LTR MaLR 318 463 -4 2136 124 0 7 chr18 2943898 2944189 -83044745 + AluSx SINE Alu 7 295 -17 13212 179 6 8 chr18 2944282 2948170 -83040764 - L1PB1 LINE L1 -5 6146 2265 294 270 208 13 chr18 2948573 2948732 -83040202 + MIR SINE MIR 28 217 -45 2225 110 7 0 chr18 2951056 2951356 -83037578 + AluSp SINE Alu 1 302 -11 312 363 40 33 chr18 2951445 2951613 -83037321 + MIR3 SINE MIR 31 202 -6 5605 117 61 2 chr18 2951711 2952633 -83036301 - Tigger1 DNA MER2_type -4 2414 1439 4307 133 65 7 chr18 2952631 2953383 -83035551 - Tigger1 DNA MER2_type -1407 1011 216 * 1279 97 0 0 chr18 2953384 2953549 -83035385 + AluSp SINE Alu 148 312 -1 596 125 67 33 chr18 2953556 2953676 -83035258 - Tigger1 DNA MER2_type -2293 125 2 297 211 60 21 chr18 2953893 2954015 -83034919 - MER21B LTR ERV1 -123 808 607 * 878 290 73 61 chr18 2953987 2954479 -83034455 - MER21B LTR ERV1 -249 682 98 718 269 91 16 chr18 2954782 2955024 -83033910 + MIR SINE MIR 3 262 0 1119 157 10 0 chr18 2955085 2955282 -83033652 - L1PB4 LINE L1 -1 6155 5957 200 292 15 0 chr18 2955370 2955435 -83033499 + MIR3 SINE MIR 138 203 -5 332 377 35 52 chr18 2956357 2956726 -83032208 + L3 LINE CR1 407 769 -808 2556 212 93 19 chr18 2956739 2957457 -83031477 - LTR48 LTR ERV1 -16 771 1 408 327 31 13 chr18 2957479 2957705 -83031229 + L3 LINE CR1 792 1021 -556 265 105 0 0 chr18 2958254 2958292 -83030642 + MER34 LTR ERV1 10 47 -495 1832 187 0 9 chr18 2958586 2958901 -83030033 - AluJo SINE Alu 0 312 1 230 355 121 49 chr18 2958932 2959197 -83029737 - L2 LINE L2 -481 2833 2550 319 364 38 15 chr18 2959295 2959427 -83029507 + L2 LINE L2 3133 3267 -5 310 217 43 14 chr18 2959796 2959865 -83029069 + Tigger7 DNA MER2_type 1 71 -268 393 104 71 7 chr18 2959872 2960026 -83028908 + (TA)n Simple_repeat Simple_repeat 2 165 0 31 58 0 0 chr18 2960029 2960081 -83028853 + AT_rich Low_complexity Low_complexity 1 52 0 1335 145 60 4 chr18 2960081 2960316 -83028618 + Tigger7 DNA MER2_type 2339 2586 -1 669 293 90 33 chr18 2960563 2961051 -83027883 - LTR33 LTR ERVL -2 519 4 252 86 0 0 chr18 2961408 2961443 -83027491 + (CA)n Simple_repeat Simple_repeat 2 36 0 206 245 0 0 chr18 2961712 2961765 -83027169 + MIR SINE MIR 209 261 -1 664 223 189 4 chr18 2963230 2963463 -83025471 + L2 LINE L2 1911 2186 -1128 1918 190 77 8 chr18 2963476 2963840 -83025094 + MSTD LTR MaLR 8 396 0 2617 264 79 23 chr18 2963846 2964894 -83024040 + L2 LINE L2 2188 3306 -7 536 328 50 5 chr18 2965037 2965238 -83023696 - MIR SINE MIR -43 219 10 1731 296 81 14 chr18 2966327 2966385 -83022549 + HAL1 LINE L1 60 113 -2394 1961 141 70 0 chr18 2966385 2966712 -83022222 + L1MC1 LINE L1 5984 6333 0 1731 296 81 14 chr18 2966712 2967089 -83021845 + HAL1 LINE L1 113 463 -2044 5029 50 3 0 chr18 2967089 2967710 -83021224 + L1PA6 LINE L1 5526 6148 -6 1731 296 81 14 chr18 2967710 2968352 -83020582 + HAL1 LINE L1 463 1237 -1270 * 7044 151 18 14 chr18 2968351 2970665 -83018269 + L1MA4A LINE L1 3973 6298 -5 265 146 0 0 chr18 2970660 2970715 -83018219 + L1MB4 LINE L1 6126 6180 0 * 557 200 90 75 chr18 2970724 2970924 -83018010 + HAL1 LINE L1 1886 2088 -419 1703 259 144 13 chr18 2970956 2971492 -83017442 - MER115 DNA AcHobo -1 692 87 663 235 78 95 chr18 2971561 2971905 -83017029 + HAL1 LINE L1 2106 2444 -63 2261 96 7 0 chr18 2971905 2972196 -83016738 + AluSx SINE Alu 1 293 -19 663 235 78 95 chr18 2972196 2972251 -83016683 + HAL1 LINE L1 2444 2498 -9 264 109 0 0 chr18 2972464 2972510 -83016424 - L1PA8 LINE L1 -2 6170 6125 430 276 9 84 chr18 2972530 2972744 -83016190 - L2 LINE L2 0 3313 3116 4196 154 60 18 chr18 2973119 2973164 -83015770 - MER4D LTR ERV1 -93 810 768 2293 96 0 7 chr18 2973164 2973466 -83015468 - AluSg SINE Alu -8 302 3 4196 154 60 18 chr18 2973466 2974197 -83014737 - MER4D LTR ERV1 -135 768 1 311 212 0 15 chr18 2974199 2974265 -83014669 + MER34B LTR ERV1 61 125 -440 370 216 114 0 chr18 2974306 2974394 -83014540 - MER39B LTR ERV1 0 653 556 186 43 0 0 chr18 2974394 2974417 -83014517 + (TTG)n Simple_repeat Simple_repeat 2 24 0 384 122 14 14 chr18 2974448 2974522 -83014412 - L1PA10 LINE L1 -3 6165 6092 889 96 0 0 chr18 2974522 2974647 -83014287 - L1PA10 LINE L1 -333 5841 5717 1723 169 7 14 chr18 2974655 2974950 -83013984 - AluJo SINE Alu -19 293 1 1206 108 22 0 chr18 2974951 2975136 -83013798 - MER39B LTR ERV1 -87 566 378 688 81 121 0 chr18 2975137 2975236 -83013698 - MER39B LTR ERV1 -542 111 1 589 244 22 97 chr18 2975236 2975641 -83013293 + MER34B LTR ERV1 169 542 0 253 310 235 26 chr18 2975905 2976173 -83012761 + L3 LINE CR1 1180 1503 -74 1806 98 9 112 chr18 2976536 2976874 -83012060 + AluSx SINE Alu 1 303 -9 644 249 59 82 chr18 2976906 2977204 -83011730 + HAL1b LINE L1 631 915 -433 2232 116 0 0 chr18 2977204 2977506 -83011428 + AluSx SINE Alu 1 302 -10 644 249 59 82 chr18 2977506 2977696 -83011238 + HAL1b LINE L1 915 1108 -240 200 159 0 23 chr18 2978363 2978407 -83010527 + GA-rich Low_complexity Low_complexity 2 44 0 4075 164 31 15 chr18 2978447 2979231 -83009703 + L1MB3 LINE L1 5387 6182 -1 261 208 13 20 chr18 2979922 2980071 -83008863 + (TA)n Simple_repeat Simple_repeat 1 148 0 1661 189 0 40 chr18 2980077 2980378 -83008556 - AluJo SINE Alu -22 290 2 26 0 0 0 chr18 2981584 2981610 -83007324 + AT_rich Low_complexity Low_complexity 1 26 0 406 234 76 27 chr18 2981641 2981825 -83007109 + L1ME4a LINE L1 5906 6098 -23 2234 116 3 3 chr18 2982260 2982571 -83006363 + AluSq SINE Alu 1 311 -2 251 243 108 36 chr18 2982993 2983104 -83005830 + MIR3 SINE MIR 67 185 -23 182 289 19 0 chr18 2983470 2983522 -83005412 - MIR3 SINE MIR -37 171 119 22 70 0 0 chr18 2983880 2983923 -83005011 + AT_rich Low_complexity Low_complexity 1 43 0 352 262 29 10 chr18 2984156 2984259 -83004675 - MIR SINE MIR 0 262 158 395 265 59 71 chr18 2984751 2984921 -83004013 - MIR SINE MIR -92 170 3 2114 56 7 24 chr18 2986462 2986780 -83002154 - AluY SINE Alu 0 313 1 352 364 24 6 chr18 2987983 2988148 -83000786 - MIR SINE MIR -20 242 75 5564 234 37 7 chr18 2988359 2989988 -82998946 + L1M4 LINE L1 2110 3786 -2360 1988 20 0 16 chr18 2989970 2990215 -82998719 + L1P LINE L1 2667 2907 -3239 * 1828 85 0 0 chr18 2990453 2990714 -82998220 + AluY SINE Alu 47 307 0 598 300 0 50 chr18 2992946 2993126 -82995808 - MIR3 SINE MIR -22 186 16 2203 264 113 18 chr18 2993201 2994309 -82994625 - L2 LINE L2 0 3313 2098 543 278 46 78 chr18 2994435 2994741 -82994193 + MARNA DNA Mariner 240 535 -51 697 274 56 26 chr18 2994769 2995003 -82993931 - MIR SINE MIR -4 258 18 2023 93 9 74 chr18 2995758 2996081 -82992853 - AluSq SINE Alu -11 302 1 318 276 71 24 chr18 2996808 2996935 -82991999 - MIR SINE MIR -110 152 20 490 254 70 10 chr18 2997899 2998100 -82990834 - MER20B DNA MER1_type -35 748 536 247 349 37 0 chr18 2998081 2998190 -82990744 - MER20B DNA MER1_type -640 143 31 * 411 314 20 26 chr18 2998221 2998374 -82990560 - L2 LINE L2 -566 2748 2597 2770 21 0 0 chr18 2999152 2999489 -82989445 - L1P LINE L1 -767 5379 5043 2295 95 0 3 chr18 3001154 3001460 -82987474 - AluSq SINE Alu -8 305 1 21 0 0 0 chr18 3001939 3001960 -82986974 + AT_rich Low_complexity Low_complexity 1 21 0 374 268 179 17 chr18 3002371 3002550 -82986384 - MLT1K LTR MaLR -7 581 374 369 159 0 0 chr18 3003195 3003258 -82985676 - Alu SINE Alu 0 300 238 2117 86 50 0 chr18 3003309 3003589 -82985345 - AluSq SINE Alu -19 294 1 290 0 29 0 chr18 3005152 3005187 -82983747 + MLT2B1 LTR ERVL 485 520 0 194 297 20 50 chr18 3005406 3005507 -82983427 + MIR SINE MIR 114 211 -51 211 361 128 53 chr18 3006627 3006760 -82982174 - L2 LINE L2 -30 3242 3100 236 244 87 87 chr18 3008148 3008263 -82980671 - L2 LINE L2 -21 3292 3178 1972 124 14 3 chr18 3010444 3010734 -82978200 - AluSq SINE Alu -20 293 1 378 0 0 0 chr18 3010826 3010868 -82978066 + (TG)n Simple_repeat Simple_repeat 2 43 0 475 330 62 10 chr18 3011461 3011770 -82977164 + L1ME4a LINE L1 5572 5896 -225 429 158 137 11 chr18 3012201 3012296 -82976638 - L1MC1 LINE L1 -207 6126 6020 328 290 0 20 chr18 3012290 3012390 -82976544 - HAL1 LINE L1 -2273 234 137 * 22 0 0 0 chr18 3012401 3012423 -82976511 + AT_rich Low_complexity Low_complexity 1 22 0 626 128 0 0 chr18 3012423 3012517 -82976417 - L1MC1 LINE L1 -13 6320 6227 261 183 0 0 chr18 3014263 3014323 -82974611 + (CA)n Simple_repeat Simple_repeat 2 61 0 230 346 0 26 chr18 3016227 3016305 -82972629 + 7SK RNA RNA 4 79 -114 289 212 30 0 chr18 3016390 3016456 -82972478 - MLT1I LTR MaLR 0 409 342 927 119 0 0 chr18 3017009 3017135 -82971799 - AluJb SINE Alu -186 126 1 2715 212 77 41 chr18 3017222 3018287 -82970647 - L1ME1 LINE L1 -104 6873 5769 1536 239 112 32 chr18 3018374 3019136 -82969798 - L1 LINE L1 -1594 5363 4480 1626 152 30 14 chr18 3019143 3019439 -82969495 + L1 LINE L1 5383 5683 -1274 410 120 33 11 chr18 3019454 3019546 -82969388 + L1MA5 LINE L1 6207 6300 0 3375 251 116 24 chr18 3019555 3019773 -82969161 - L1ME1 LINE L1 -2468 4489 4293 2121 131 0 25 chr18 3019773 3020087 -82968847 - AluSq SINE Alu -7 306 1 3375 251 116 24 chr18 3020087 3022398 -82966536 - L1ME1 LINE L1 -2664 4293 1565 536 278 120 8 chr18 3022420 3022661 -82966273 - L1ME1 LINE L1 -5358 1501 1234 21 36 0 0 chr18 3022730 3022758 -82966176 + AT_rich Low_complexity Low_complexity 1 28 0 1535 224 0 22 chr18 3022788 3023100 -82965834 + AluJb SINE Alu 3 307 -5 237 258 139 48 chr18 3023247 3023456 -82965478 - L1ME1 LINE L1 -5585 1362 1135 325 229 40 0 chr18 3023784 3024065 -82964869 + (TA)n Simple_repeat Simple_repeat 1 292 0 21 57 0 0 chr18 3024086 3024121 -82964813 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr18 3024272 3024293 -82964641 + AT_rich Low_complexity Low_complexity 1 21 0 2475 63 0 0 chr18 3024531 3024833 -82964101 - AluY SINE Alu -7 304 3 1857 134 3 11 chr18 3025194 3025477 -82963457 - AluSx SINE Alu 0 312 32 1261 170 89 68 chr18 3025494 3025876 -82963058 - MLT1B LTR MaLR 0 390 1 185 349 0 12 chr18 3026690 3026776 -82962158 - L2 LINE L2 -2 3270 3186 2184 118 16 0 chr18 3026785 3027134 -82961800 + AluSp SINE Alu 1 354 0 3417 135 73 16 chr18 3027134 3027712 -82961222 + MER4E-int LTR ERV1 3478 4088 -2670 * 4869 132 106 7 chr18 3027711 3028566 -82960368 + MER4E-int LTR ERV1 4452 5391 -1367 5042 136 52 22 chr18 3028609 3029517 -82959417 + MER4E-int LTR ERV1 5711 6645 -113 4620 125 61 4 chr18 3030366 3031103 -82957831 + MER4E LTR ERV1 1 779 0 2758 137 32 78 chr18 3031307 3031862 -82957072 - LTR26B LTR ERV1 0 531 2 288 350 49 0 chr18 3032124 3032247 -82956687 - L2 LINE L2 -1 3312 3184 231 242 0 61 chr18 3032442 3032508 -82956426 - MIR3 SINE MIR -21 187 126 223 185 37 37 chr18 3032659 3032713 -82956221 - MIR SINE MIR -122 140 87 3896 130 32 2 chr18 3032946 3033562 -82955372 + MER41B LTR ERV1 1 635 0 3343 119 11 37 chr18 3034138 3034683 -82954251 - LTR26B LTR ERV1 0 531 1 3135 113 51 6 chr18 3035090 3035579 -82953355 + MER9 LTR ERVK 1 511 0 1634 191 191 9 chr18 3035669 3036061 -82952873 + MLT2B1 LTR ERVL 2 484 -36 2949 152 43 34 chr18 3036061 3036708 -82952226 + MER39B LTR ERV1 1 653 0 1634 191 191 9 chr18 3036708 3036754 -82952180 + MLT2B1 LTR ERVL 484 520 0 225 341 116 7 chr18 3037027 3037165 -82951769 + L2 LINE L2 397 549 -2765 438 293 61 96 chr18 3037171 3037451 -82951483 + L2 LINE L2 3003 3272 0 332 277 83 39 chr18 3038113 3038282 -82950652 + MLT1I LTR MaLR 70 273 -243 414 175 44 70 chr18 3038325 3038439 -82950495 + MLT1I LTR MaLR 281 437 -13 1102 118 118 0 chr18 3039259 3039445 -82949489 - L1PA13 LINE L1 -2 6161 5954 313 258 88 44 chr18 3039655 3039814 -82949120 + MIR SINE MIR 97 262 0 1878 234 24 60 chr18 3040093 3040644 -82948290 + LTR26B LTR ERV1 1 531 0 501 291 77 28 chr18 3040802 3041049 -82947885 - MIR SINE MIR 0 262 4 280 324 55 35 chr18 3041076 3041221 -82947713 - MIR3 SINE MIR -10 198 51 267 31 0 0 chr18 3041328 3041360 -82947574 + (TC)n Simple_repeat Simple_repeat 1 32 0 214 360 16 24 chr18 3043483 3043608 -82945326 - MIR SINE MIR -50 212 89 2123 123 7 3 chr18 3044536 3044837 -82944097 + AluSx SINE Alu 1 302 -10 1954 138 0 14 chr18 3045114 3045432 -82943502 - AluSx SINE Alu 0 318 5 556 171 0 63 chr18 3046759 3046870 -82942064 + FLAM_A SINE Alu 18 121 -21 279 0 0 0 chr18 3046874 3046905 -82942029 + (TG)n Simple_repeat Simple_repeat 2 32 0 230 347 61 10 chr18 3047593 3047691 -82941243 + MIR SINE MIR 43 145 -117 607 257 0 0 chr18 3047868 3048004 -82940930 - MIR SINE MIR -14 248 113 825 248 101 21 chr18 3048446 3048684 -82940250 + MIR SINE MIR 4 260 -2 1752 124 0 23 chr18 3048716 3048981 -82939953 - AluSg SINE Alu -51 259 1 2257 95 0 0 chr18 3049149 3049458 -82939476 - AluSg SINE Alu 0 309 1 1852 143 0 27 chr18 3050853 3051172 -82937762 - AluSg SINE Alu 0 311 1 1943 140 15 29 chr18 3051527 3051869 -82937065 + THE1A LTR MaLR 1 337 -18 809 298 109 33 chr18 3052286 3052746 -82936188 - HAL1 LINE L1 -604 1903 1409 527 311 6 23 chr18 3053020 3053197 -82935737 - MIR SINE MIR -10 252 79 853 157 65 0 chr18 3053197 3053350 -82935584 + LTR32 LTR ERVL 13 175 -296 1448 148 12 130 chr18 3053388 3053727 -82935207 + LTR32 LTR ERVL 172 470 -1 234 284 81 0 chr18 3053728 3053802 -82935132 - MIR SINE MIR -181 81 2 424 285 44 22 chr18 3054444 3054581 -82934353 + MIR SINE MIR 47 186 -76 631 121 0 10 chr18 3055831 3055930 -82933004 + MER4A LTR ERV1 1 98 -566 1534 153 7 26 chr18 3055930 3056307 -82932627 + MER4A LTR ERV1 261 664 0 387 268 144 47 chr18 3056349 3056688 -82932246 + L1ME4a LINE L1 5588 5959 -162 248 286 74 34 chr18 3056734 3056909 -82932025 + L1ME4a LINE L1 5935 6116 -5 552 282 142 80 chr18 3056989 3057221 -82931713 + MLT1J LTR MaLR 1 217 -294 1855 121 0 4 chr18 3057221 3057478 -82931456 + AluSq SINE Alu 45 300 -13 552 282 142 80 chr18 3057478 3057696 -82931238 + MLT1J LTR MaLR 217 479 -32 23 33 0 0 chr18 3057781 3057811 -82931123 + AT_rich Low_complexity Low_complexity 1 30 0 506 171 54 47 chr18 3059012 3059141 -82929793 - MLT1I LTR MaLR -279 130 1 23 33 0 0 chr18 3059201 3059231 -82929703 + AT_rich Low_complexity Low_complexity 1 30 0 2035 98 3 36 chr18 3059261 3059566 -82929368 + AluY SINE Alu 1 295 -16 566 271 75 65 chr18 3059708 3060686 -82928248 + L1ME3 LINE L1 3142 4128 -2018 706 251 123 92 chr18 3060697 3061152 -82927782 - MLT1J LTR MaLR 0 511 43 740 303 125 27 chr18 3061192 3062748 -82926186 + L1ME3 LINE L1 4150 5863 -299 1562 153 65 4 chr18 3063185 3063460 -82925474 - AluSx SINE Alu -16 296 5 182 88 0 29 chr18 3063960 3063994 -82924940 + (TA)n Simple_repeat Simple_repeat 2 34 0 793 249 115 5 chr18 3064184 3064393 -82924541 - MIR SINE MIR -29 233 2 182 224 145 26 chr18 3064921 3064997 -82923937 - MIR3 SINE MIR -6 202 118 379 234 32 0 chr18 3066294 3066388 -82922546 - MER94 DNA DNA -3 131 35 258 81 0 0 chr18 3066593 3066630 -82922304 + (TG)n Simple_repeat Simple_repeat 2 38 0 225 394 48 10 chr18 3067778 3067882 -82921052 + L2 LINE L2 3122 3229 -43 805 293 88 19 chr18 3068229 3069129 -82919805 - L1ME3A LINE L1 -259 5894 4914 294 239 115 35 chr18 3069134 3069247 -82919687 - L1M4 LINE L1 -1021 5125 5004 409 304 105 18 chr18 3069309 3069585 -82919349 - L1ME3A LINE L1 -5120 999 700 603 320 55 67 chr18 3070094 3070708 -82918226 - L2 LINE L2 -3 3310 2710 2142 121 7 0 chr18 3070708 3070997 -82917937 + AluSx SINE Alu 1 291 -21 603 320 55 67 chr18 3070997 3071154 -82917780 - L2 LINE L2 -603 2710 2553 280 258 15 0 chr18 3072435 3072501 -82916433 - MER5A DNA MER1_type -83 106 40 204 322 17 0 chr18 3072533 3072592 -82916342 + MER5B DNA MER1_type 1 60 -118 3480 164 45 43 chr18 3072597 3072696 -82916238 + LTR8A LTR ERV1 1 98 -629 2153 133 39 33 chr18 3072696 3073058 -82915876 - THE1B LTR MaLR 0 364 1 3480 164 45 43 chr18 3073058 3073683 -82915251 + LTR8A LTR ERV1 98 727 0 476 134 37 0 chr18 3073688 3073770 -82915164 + MER5B DNA MER1_type 67 151 -27 232 267 35 23 chr18 3073695 3073781 -82915153 - MER5A DNA MER1_type -74 115 29 * 347 308 42 21 chr18 3074430 3074596 -82914338 + MIR SINE MIR 46 212 -50 2583 36 0 7 chr18 3074739 3075076 -82913858 - AluY SINE Alu 0 311 2 2192 112 0 7 chr18 3075077 3075372 -82913562 - AluSc SINE Alu -16 293 1 26 0 0 0 chr18 3075424 3075450 -82913484 + AT_rich Low_complexity Low_complexity 1 26 0 394 345 7 0 chr18 3076475 3076623 -82912311 - MIR SINE MIR -8 254 106 364 251 80 68 chr18 3077763 3077926 -82911008 - L2 LINE L2 -213 3059 2895 315 270 10 20 chr18 3078855 3078955 -82909979 - MIR SINE MIR -62 200 102 829 176 81 18 chr18 3078969 3079190 -82909744 - Charlie5 DNA MER1_type 0 2624 2390 315 85 0 0 chr18 3080066 3080113 -82908821 + (CA)n Simple_repeat Simple_repeat 2 48 0 186 257 129 0 chr18 3080131 3080201 -82908733 + L2 LINE L2 3186 3264 -8 234 0 0 0 chr18 3080453 3080479 -82908455 + (TG)n Simple_repeat Simple_repeat 2 27 0 1230 290 63 15 chr18 3081120 3081530 -82907404 + LTR16A LTR ERVL 21 450 0 425 287 90 80 chr18 3082549 3082849 -82906085 + L3 LINE CR1 1190 1492 -85 380 171 46 2 chr18 3083228 3083309 -82905625 + MLT1H LTR MaLR 457 542 0 1672 180 0 7 chr18 3084327 3084638 -82904296 + AluJo SINE Alu 1 309 0 246 243 108 36 chr18 3135525 3135636 -82853298 + MIR3 SINE MIR 67 185 -23 183 289 19 0 chr18 3136002 3136054 -82852880 - MIR3 SINE MIR -37 171 119 22 70 0 0 chr18 3136412 3136455 -82852479 + AT_rich Low_complexity Low_complexity 1 43 0 353 262 29 10 chr18 3136688 3136791 -82852143 - MIR SINE MIR 0 262 158 400 265 59 71 chr18 3137283 3137453 -82851481 - MIR SINE MIR -92 170 3 4959 160 64 17 chr18 3138674 3139531 -82849403 + L1MC2 LINE L1 5308 6219 -125 2239 107 0 3 chr18 3139531 3139830 -82849104 - AluSx SINE Alu -14 298 1 4959 160 64 17 chr18 3139830 3139961 -82848973 + L1MC2 LINE L1 6219 6342 -2 3142 143 11 30 chr18 3140610 3141134 -82847800 - MLT2B2 LTR ERVL 0 515 2 1213 35 0 7 chr18 3141424 3141569 -82847365 + AluY SINE Alu 3 146 -165 232 68 0 23 chr18 3141569 3141613 -82847321 + Alu SINE Alu 258 300 0 348 83 0 0 chr18 3141843 3141891 -82847043 - MADE1 DNA Mariner 0 80 33 376 94 62 0 chr18 3141901 3141965 -82846969 - MADE1 DNA Mariner -12 68 1 309 26 0 0 chr18 3142971 3143009 -82845925 + (TATTG)n Simple_repeat Simple_repeat 2 39 0 514 194 0 0 chr18 3143031 3143129 -82845805 - AluJ/FLAM SINE Alu -212 100 3 415 207 30 30 chr18 3143330 3143465 -82845469 - L1ME4a LINE L1 -21 6100 5966 244 273 134 43 chr18 3143929 3144138 -82844796 + L1ME1 LINE L1 1135 1362 -5585 1516 224 0 22 chr18 3144285 3144597 -82844337 - AluJb SINE Alu -5 307 3 21 36 0 0 chr18 3144627 3144655 -82844279 + AT_rich Low_complexity Low_complexity 1 28 0 552 278 120 8 chr18 3144724 3144965 -82843969 + L1ME1 LINE L1 1234 1501 -5358 3501 251 128 24 chr18 3144987 3147298 -82841636 + L1ME1 LINE L1 1565 4295 -2662 2094 131 0 25 chr18 3147298 3147612 -82841322 + AluSq SINE Alu 1 306 -7 3501 251 128 24 chr18 3147612 3147830 -82841104 + L1ME1 LINE L1 4295 4489 -2468 416 120 33 11 chr18 3147839 3147931 -82841003 - L1MA5 LINE L1 0 6300 6207 1641 152 30 14 chr18 3147946 3148242 -82840692 - L1 LINE L1 -1274 4872 4572 1564 239 112 32 chr18 3148249 3149011 -82839923 + L1P LINE L1 4480 5363 -1594 2765 212 77 41 chr18 3149098 3150163 -82838771 + L1ME1 LINE L1 5769 6873 -104 911 119 0 0 chr18 3150250 3150376 -82838558 + AluJb SINE Alu 1 126 -186 261 183 0 0 chr18 3152931 3152991 -82835943 + (TG)n Simple_repeat Simple_repeat 2 61 0 621 128 0 0 chr18 3154737 3154831 -82834103 + L1MC1 LINE L1 6227 6320 -13 22 0 0 0 chr18 3154831 3154853 -82834081 + AT_rich Low_complexity Low_complexity 1 22 0 335 290 0 20 chr18 3154864 3154964 -82833970 + HAL1 LINE L1 137 234 -2273 * 429 158 137 11 chr18 3154958 3155053 -82833881 + L1MC1 LINE L1 6020 6126 -207 503 330 62 10 chr18 3155484 3155793 -82833141 - L1ME4a LINE L1 -225 5896 5572 2061 56 7 24 chr18 3156560 3156878 -82832056 - AluY SINE Alu 0 313 1 385 358 24 6 chr18 3158081 3158246 -82830688 - MIR SINE MIR -20 242 75 5706 234 37 7 chr18 3158457 3160086 -82828848 + L1M4 LINE L1 2110 3786 -2360 * 18138 27 0 2 chr18 3160068 3162345 -82826589 + L1P LINE L1 2667 4940 -1206 266 336 70 16 chr18 3162983 3163111 -82825823 + MIR3 SINE MIR 40 174 -34 1523 297 81 14 chr18 3163412 3163471 -82825463 + HAL1 LINE L1 60 114 -2393 1949 141 70 0 chr18 3163471 3163798 -82825136 + L1MC1 LINE L1 5984 6333 0 1523 297 81 14 chr18 3163798 3164175 -82824759 + HAL1 LINE L1 114 464 -2043 5037 50 3 0 chr18 3164175 3164796 -82824138 + L1PA6 LINE L1 5526 6148 -6 1523 297 81 14 chr18 3164796 3165438 -82823496 + HAL1 LINE L1 464 1237 -1270 * 6673 151 19 14 chr18 3165437 3167750 -82821184 + L1MA4A LINE L1 3973 6298 -5 254 146 0 0 chr18 3167745 3167800 -82821134 + L1MB4 LINE L1 6126 6180 0 * 493 200 90 75 chr18 3167809 3168009 -82820925 + HAL1 LINE L1 1886 2088 -419 1508 259 144 13 chr18 3168041 3168577 -82820357 - MER115 DNA AcHobo -1 692 87 588 243 38 41 chr18 3168646 3168913 -82820021 + HAL1 LINE L1 2106 2371 -136 2279 96 7 0 chr18 3168990 3169281 -82819653 + AluSx SINE Alu 1 293 -19 256 106 0 0 chr18 3169549 3169596 -82819338 - L1PA8 LINE L1 -1 6171 6125 7347 36 6 1 chr18 3169756 3170888 -82818046 + L1PA4 LINE L1 5044 6155 0 1365 214 37 34 chr18 3170888 3171266 -82817668 + L1M4 LINE L1 3779 4157 -1989 2284 100 3 0 chr18 3171322 3171622 -82817312 + AluY SINE Alu 1 301 -10 182 266 38 63 chr18 3172168 3172247 -82816687 - L2 LINE L2 -6 3307 3231 394 256 53 0 chr18 3172391 3172524 -82816410 + MER117 DNA MER1_type 1 140 -57 23 33 0 0 chr18 3173589 3173619 -82815315 + AT_rich Low_complexity Low_complexity 1 30 0 301 354 123 12 chr18 3174532 3174775 -82814159 - L2 LINE L2 -77 3195 2926 381 356 70 30 chr18 3174827 3175097 -82813837 - L2 LINE L2 -470 2844 2564 294 50 0 0 chr18 3175271 3175311 -82813623 + (TG)n Simple_repeat Simple_repeat 2 41 0 4686 84 39 6 chr18 3175563 3176261 -82812673 - LTR30 LTR ERV1 -1 721 1 1085 244 10 0 chr18 3176803 3177111 -82811823 + L1MA4 LINE L1 5989 6299 -1 229 313 27 27 chr18 3177395 3177507 -82811427 - MIR SINE MIR -21 241 130 * 558 248 140 28 chr18 3177457 3177671 -82811263 + MIR SINE MIR 25 262 0 345 314 51 0 chr18 3177666 3177784 -82811150 - MIR SINE MIR -101 161 38 * 1743 127 54 6 chr18 3178576 3178890 -82810044 - L1MB3 LINE L1 -14 6169 5841 1714 177 20 0 chr18 3178890 3179186 -82809748 + L1PA16 LINE L1 5848 6153 -13 25 51 0 0 chr18 3179186 3179225 -82809709 + AT_rich Low_complexity Low_complexity 1 39 0 1141 196 4 4 chr18 3179259 3179494 -82809440 - L1MB3 LINE L1 -328 5855 5621 1726 204 20 20 chr18 3179494 3179934 -82809000 - L1MB3 LINE L1 -1228 4918 4479 298 254 217 81 chr18 3180998 3181091 -82807843 + L2 LINE L2 2807 2886 -386 3114 165 17 4 chr18 3181091 3181630 -82807304 + MER44D DNA MER2_type 2 602 -3 298 254 217 81 chr18 3181630 3181918 -82807016 + L2 LINE L2 2886 3240 -32 1595 68 56 5 chr18 3181920 3182222 -82806712 + MER51B LTR ERV1 3 377 0 216 365 83 16 chr18 3182417 3182609 -82806325 + L2 LINE L2 3012 3216 -56 763 129 95 0 chr18 3183505 3183621 -82805313 + FLAM_C SINE Alu 6 132 -11 350 239 92 18 chr18 3183779 3183942 -82804992 - LTR16B LTR ERVL -12 452 278 2310 95 0 3 chr18 3185580 3185886 -82803048 - AluSq SINE Alu -8 305 1 21 0 0 0 chr18 3186365 3186386 -82802548 + AT_rich Low_complexity Low_complexity 1 21 0 318 268 179 17 chr18 3186797 3186976 -82801958 - MLT1K LTR MaLR -7 581 374 407 127 0 0 chr18 3187621 3187684 -82801250 - Alu SINE Alu -10 300 238 2126 86 50 0 chr18 3187735 3188015 -82800919 - AluSq SINE Alu -19 294 1 287 44 0 0 chr18 3189571 3189613 -82799321 + MLT2B2 LTR ERVL 403 515 0 195 297 20 50 chr18 3189831 3189932 -82799002 + MIR SINE MIR 114 211 -51 248 382 41 41 chr18 3191060 3191183 -82797751 - L2 LINE L2 -50 3222 3100 237 244 87 87 chr18 3192570 3192685 -82796249 - L2 LINE L2 -21 3292 3178 1990 124 14 3 chr18 3194866 3195156 -82793778 - AluSq SINE Alu -20 293 1 405 0 0 0 chr18 3195248 3195293 -82793641 + (TG)n Simple_repeat Simple_repeat 1 45 0 1780 89 0 0 chr18 3195428 3195689 -82793245 + AluY SINE Alu 47 307 0 608 300 0 50 chr18 3197921 3198101 -82790833 - MIR3 SINE MIR -22 186 16 2272 263 113 18 chr18 3198176 3199284 -82789650 - L2 LINE L2 0 3313 2098 468 280 41 82 chr18 3199410 3199703 -82789231 + MARNA DNA Mariner 240 520 -66 695 274 56 26 chr18 3199744 3199978 -82788956 - MIR SINE MIR -4 258 18 2036 93 9 74 chr18 3200733 3201056 -82787878 - AluSq SINE Alu -11 302 1 322 276 71 24 chr18 3201783 3201910 -82787024 - MIR SINE MIR -110 152 20 445 233 80 11 chr18 3202874 3203050 -82785884 - MER20B DNA MER1_type -35 748 561 411 314 20 26 chr18 3203196 3203349 -82785585 - L2 LINE L2 -566 2748 2597 4545 21 0 0 chr18 3204127 3204691 -82784243 - L1P LINE L1 -767 5379 4816 4922 35 2 0 chr18 3204691 3205289 -82783645 + L1PA3 LINE L1 5557 6159 0 1136 75 0 0 chr18 3205460 3205594 -82783340 + AluSq/x SINE Alu 3 136 -177 280 233 44 11 chr18 3205786 3205876 -82783058 - MLT1G1 LTR MaLR 0 590 463 492 300 56 35 chr18 3205958 3206201 -82782733 - MLT1G1 LTR MaLR -267 328 32 2964 107 9 5 chr18 3206201 3206633 -82782301 + MER57B LTR ERV1 1 434 0 492 300 56 35 chr18 3206633 3206666 -82782268 - MLT1G1 LTR MaLR -563 32 1 233 234 103 9 chr18 3206845 3206952 -82781982 + L1ME4a LINE L1 5990 6106 -15 21 0 0 0 chr18 3206968 3206989 -82781945 + AT_rich Low_complexity Low_complexity 1 21 0 228 235 20 0 chr18 3209036 3209087 -82779847 + CT-rich Low_complexity Low_complexity 1 52 0 2167 125 0 0 chr18 3210007 3210302 -82778632 - AluSq SINE Alu -18 295 1 1891 161 61 29 chr18 3210421 3210959 -82777975 + MLT2A2 LTR ERVL 1 554 0 22 0 0 0 chr18 3211139 3211161 -82777773 + AT_rich Low_complexity Low_complexity 1 22 0 280 295 76 19 chr18 3211212 3211317 -82777617 - MIR SINE MIR -99 163 53 281 188 29 0 chr18 3212280 3212349 -82776585 - MER5C DNA MER1_type 0 324 254 262 167 0 0 chr18 3212475 3212523 -82776411 - MER5C DNA MER1_type -200 124 77 2116 141 0 0 chr18 3212801 3213100 -82775834 - AluSx SINE Alu -8 304 6 5463 140 10 15 chr18 3213370 3214246 -82774688 + Tigger1 DNA MER2_type 1 872 -1546 4340 159 10 4 chr18 3214254 3214945 -82773989 + MER50 LTR ERV1 17 711 -23 * 9262 139 33 2 chr18 3214943 3216449 -82772485 + Tigger1 DNA MER2_type 866 2418 0 683 179 50 7 chr18 3217757 3217897 -82771037 + MLT1C LTR MaLR 318 463 -4 2118 124 0 7 chr18 3218115 3218406 -82770528 + AluSx SINE Alu 7 295 -17 14070 180 6 8 chr18 3218499 3222387 -82766547 - L1PB1 LINE L1 -5 6146 2265 298 270 208 13 chr18 3222790 3222949 -82765985 + MIR SINE MIR 28 217 -45 1949 94 0 0 chr18 3224416 3224670 -82764264 + AluSg1 SINE Alu 44 297 -12 1784 33 0 0 chr18 3225086 3225300 -82763634 + L1PA2 LINE L1 5942 6155 0 708 227 62 0 chr18 3225406 3225600 -82763334 + L1ME LINE L1 4643 4848 -1298 1649 183 36 57 chr18 3225600 3225988 -82762946 - MLT1B LTR MaLR 0 390 11 1084 184 37 30 chr18 3225993 3226507 -82762427 + L1ME LINE L1 4844 5507 -659 267 245 61 0 chr18 3226701 3226799 -82762135 - L1M4 LINE L1 -1002 5144 5041 357 302 65 0 chr18 3226865 3227004 -82761930 + MLT1K LTR MaLR 290 437 -151 271 295 74 0 chr18 3227145 3227240 -82761694 + MIR SINE MIR 153 254 -8 346 211 0 0 chr18 3229783 3229854 -82759080 - MER116 DNA Mariner -1 79 9 306 0 0 0 chr18 3230330 3230364 -82758570 + (TG)n Simple_repeat Simple_repeat 1 34 0 2475 63 0 0 chr18 3230714 3231016 -82757918 + AluY SINE Alu 3 304 -7 21 0 0 0 chr18 3231254 3231275 -82757659 + AT_rich Low_complexity Low_complexity 1 21 0 215 193 45 0 chr18 3231451 3231539 -82757395 + (TA)n Simple_repeat Simple_repeat 1 92 0 1517 103 0 0 chr18 3231655 3231849 -82757085 + AluSg/x SINE Alu 102 295 -17 705 254 18 6 chr18 3231849 3232018 -82756916 + MIR SINE MIR 92 262 0 288 0 0 0 chr18 3232037 3232069 -82756865 + (TG)n Simple_repeat Simple_repeat 2 33 0 2371 80 0 3 chr18 3233430 3233731 -82755203 + AluSq SINE Alu 1 300 -13 1788 187 0 9 chr18 3234014 3234329 -82754605 - AluJo SINE Alu 0 312 1 230 355 121 49 chr18 3234360 3234625 -82754309 - L2 LINE L2 -481 2833 2550 319 364 38 15 chr18 3234723 3234855 -82754079 + L2 LINE L2 3133 3267 -5 310 217 43 14 chr18 3235224 3235293 -82753641 + Tigger7 DNA MER2_type 1 71 -268 30 27 0 0 chr18 3235298 3235335 -82753599 + AT_rich Low_complexity Low_complexity 1 37 0 412 110 65 7 chr18 3235335 3235489 -82753445 + (TA)n Simple_repeat Simple_repeat 1 163 0 1365 145 60 0 chr18 3235509 3235743 -82753191 + Tigger7 DNA MER2_type 2339 2586 -1 669 293 90 33 chr18 3235990 3236478 -82752456 - LTR33 LTR ERVL -2 519 4 252 86 0 0 chr18 3236835 3236870 -82752064 + (CA)n Simple_repeat Simple_repeat 2 36 0 206 245 0 0 chr18 3237140 3237193 -82751741 + MIR SINE MIR 209 261 -1 664 223 189 4 chr18 3238658 3238891 -82750043 + L2 LINE L2 1911 2186 -1128 1918 190 77 8 chr18 3238904 3239268 -82749666 + MSTD LTR MaLR 8 396 0 2617 264 79 23 chr18 3239274 3240322 -82748612 + L2 LINE L2 2188 3306 -7 556 323 50 5 chr18 3240465 3240666 -82748268 - MIR SINE MIR -43 219 10 2199 110 7 0 chr18 3242589 3242889 -82746045 + AluSp SINE Alu 1 302 -11 320 390 22 33 chr18 3242964 3243146 -82745788 + MIR3 SINE MIR 23 202 -6 5935 118 60 2 chr18 3243240 3244166 -82744768 - Tigger1 DNA MER2_type 0 2418 1439 4562 132 65 7 chr18 3244164 3244916 -82744018 - Tigger1 DNA MER2_type -1407 1011 216 * 1261 97 0 0 chr18 3244917 3245082 -82743852 + AluSp SINE Alu 148 312 -1 637 125 67 33 chr18 3245089 3245209 -82743725 - Tigger1 DNA MER2_type -2293 125 2 1006 269 71 51 chr18 3245426 3246012 -82742922 - MER21B LTR ERV1 -124 739 98 716 269 91 16 chr18 3246315 3246557 -82742377 + MIR SINE MIR 3 262 0 1126 157 10 0 chr18 3246618 3246815 -82742119 - L1PB4 LINE L1 -1 6155 5957 204 292 15 0 chr18 3246903 3246968 -82741966 + MIR3 SINE MIR 138 203 -5 339 377 35 52 chr18 3247890 3248259 -82740675 + L3 LINE CR1 407 769 -808 2777 212 93 19 chr18 3248272 3248990 -82739944 - LTR48 LTR ERV1 -16 771 1 428 327 31 13 chr18 3249012 3249238 -82739696 + L3 LINE CR1 792 1021 -556 508 339 48 0 chr18 3249787 3249854 -82739080 + MER34B LTR ERV1 10 68 -474 4504 164 57 16 chr18 3249854 3249990 -82738944 - MER4D LTR ERV1 0 903 774 2293 96 0 7 chr18 3249990 3250292 -82738642 - AluSg SINE Alu -8 302 3 4504 164 57 16 chr18 3250292 3251023 -82737911 - MER4D LTR ERV1 -129 774 1 508 339 48 0 chr18 3251023 3251119 -82737815 + MER34B LTR ERV1 68 171 -371 370 216 114 0 chr18 3251132 3251220 -82737714 - MER39B LTR ERV1 0 653 556 186 43 0 0 chr18 3251220 3251243 -82737691 + (TTG)n Simple_repeat Simple_repeat 2 24 0 384 122 14 14 chr18 3251274 3251348 -82737586 - L1PA10 LINE L1 -3 6165 6092 889 96 0 0 chr18 3251348 3251473 -82737461 - L1PA10 LINE L1 -333 5841 5717 1723 169 7 14 chr18 3251481 3251776 -82737158 - AluJo SINE Alu -19 293 1 1206 108 22 0 chr18 3251777 3251962 -82736972 - MER39B LTR ERV1 -87 566 378 688 81 121 0 chr18 3251963 3252062 -82736872 - MER39B LTR ERV1 -542 111 1 589 244 22 97 chr18 3252062 3252467 -82736467 + MER34B LTR ERV1 169 542 0 253 310 235 26 chr18 3252731 3252999 -82735935 + L3 LINE CR1 1180 1503 -74 1806 98 9 112 chr18 3253362 3253700 -82735234 + AluSx SINE Alu 1 303 -9 644 249 59 82 chr18 3253732 3254030 -82734904 + HAL1b LINE L1 631 915 -433 2232 116 0 0 chr18 3254030 3254332 -82734602 + AluSx SINE Alu 1 302 -10 644 249 59 82 chr18 3254332 3254522 -82734412 + HAL1b LINE L1 915 1108 -240 200 159 0 23 chr18 3255189 3255233 -82733701 + GA-rich Low_complexity Low_complexity 2 44 0 4075 164 31 15 chr18 3255273 3256057 -82732877 + L1MB3 LINE L1 5387 6182 -1 261 208 13 20 chr18 3256748 3256897 -82732037 + (TA)n Simple_repeat Simple_repeat 1 148 0 1661 189 0 40 chr18 3256903 3257204 -82731730 - AluJo SINE Alu -22 290 2 304 136 0 0 chr18 3258934 3258978 -82729956 - MSTA LTR MaLR 0 428 385 685 233 17 6 chr18 3258979 3259156 -82729778 - MLT1E LTR MaLR -387 180 1 240 312 147 0 chr18 3259213 3259322 -82729612 - L2 LINE L2 0 3313 3189 2638 108 3 6 chr18 3259715 3260077 -82728857 + THE1B LTR MaLR 1 361 -3 2140 131 81 31 chr18 3260253 3260634 -82728300 - MSTA LTR MaLR -28 400 1 454 153 0 24 chr18 3260720 3260805 -82728129 + LTR54 LTR ERV1 1 83 -427 282 179 18 0 chr18 3260874 3260930 -82728004 - LTR54 LTR ERV1 -379 131 75 * 445 184 24 173 chr18 3260921 3261089 -82727845 + LTR54 LTR ERV1 139 281 -229 7060 134 7 11 chr18 3261118 3262685 -82726249 - L1MA3 LINE L1 -7 7717 6153 * 12744 173 16 22 chr18 3262681 3263474 -82725460 - L1MA3 LINE L1 -5404 2161 1365 2178 65 17 31 chr18 3263474 3263766 -82725168 + AluSp SINE Alu 23 310 -3 12744 173 16 22 chr18 3263766 3265133 -82723801 - L1MA3 LINE L1 -6200 1365 13 912 172 46 0 chr18 3265137 3265311 -82723623 + LTR54 LTR ERV1 329 510 0 193 292 0 0 chr18 3265319 3265367 -82723567 + L2 LINE L2 3219 3266 -6 2402 174 63 58 chr18 3266936 3267488 -82721446 + MER34B LTR ERV1 11 565 0 415 306 95 26 chr18 3267512 3267744 -82721190 - MIR SINE MIR -1 261 14 355 87 29 0 chr18 3268103 3268172 -82720762 + (TTTG)n Simple_repeat Simple_repeat 2 72 0 1039 246 23 19 chr18 3268182 3268446 -82720488 - MLT1L LTR MaLR -343 272 8 288 0 0 0 chr18 3268497 3268529 -82720405 + (TCTA)n Simple_repeat Simple_repeat 2 33 0 1781 159 3 20 chr18 3268886 3269181 -82719753 + AluJo SINE Alu 4 293 -19 2095 153 5 79 chr18 3271055 3271474 -82717460 + MLT1B LTR MaLR 3 390 0 206 284 0 30 chr18 3271586 3271653 -82717281 + MIR SINE MIR 186 250 -12 1106 216 38 0 chr18 3271922 3272158 -82716776 + L1 LINE L1 4924 5168 -978 233 237 129 14 chr18 3272488 3272627 -82716307 - L1MC5 LINE L1 -84 7877 7723 290 132 0 19 chr18 3273099 3273152 -82715782 + MLT2B1 LTR ERVL 461 512 -8 836 302 79 12 chr18 3273231 3273572 -82715362 - L1MC4a LINE L1 -1847 5961 5598 11399 194 41 9 chr18 3273572 3275566 -82713368 + ERVL LTR ERVL 2517 4572 -1192 2594 140 10 0 chr18 3275747 3276139 -82712795 + MER57A LTR ERV1 8 403 0 237 253 0 48 chr18 3277205 3277288 -82711646 + GA-rich Low_complexity Low_complexity 3 81 0 286 266 0 0 chr18 3277447 3277526 -82711408 + LTR67 LTR ERVL 3 81 -476 270 292 184 64 chr18 3277808 3278150 -82710784 + LTR67 LTR ERVL 159 541 -16 2270 108 0 0 chr18 3278192 3278488 -82710446 + AluY SINE Alu 1 296 -15 22 35 0 0 chr18 3279069 3279098 -82709836 + AT_rich Low_complexity Low_complexity 1 29 0 213 301 21 54 chr18 3279248 3279341 -82709593 - MIR3 SINE MIR -6 202 113 2109 117 7 17 chr18 3279351 3279649 -82709285 + AluSx SINE Alu 5 299 -13 2806 247 68 58 chr18 3279731 3280904 -82708030 - L1MCa LINE L1 -3691 2735 1576 2455 146 95 0 chr18 3280904 3281295 -82707639 - MSTC LTR MaLR 0 428 1 2806 247 68 58 chr18 3281295 3281471 -82707463 - L1MCa LINE L1 -4850 1576 1403 1395 200 7 32 chr18 3281471 3281756 -82707178 - AluJo SINE Alu -30 282 5 2806 247 68 58 chr18 3281756 3282207 -82706727 - L1MCa LINE L1 -5023 1403 849 384 153 71 12 chr18 3282210 3282295 -82706639 + L1M4 LINE L1 4627 4716 -1430 640 137 0 39 chr18 3282295 3282448 -82706486 + (GGA)n Simple_repeat Simple_repeat 3 149 0 1546 117 0 5 chr18 3282586 3282791 -82706143 - AluSg SINE Alu -106 204 1 421 333 39 50 chr18 3282794 3283154 -82705780 - L1MC4a LINE L1 -508 5613 5258 2271 103 0 3 chr18 3283462 3283764 -82705170 - AluSg SINE Alu -9 301 1 216 303 106 16 chr18 3283869 3283992 -82704942 + MIR SINE MIR 36 167 -65 4693 69 9 2 chr18 3284869 3285451 -82703483 + L1PA14 LINE L1 5565 6150 -11 647 355 99 8 chr18 3285724 3286097 -82702837 - L2 LINE L2 -318 2995 2588 28 0 0 0 chr18 3286647 3286675 -82702259 + AT_rich Low_complexity Low_complexity 1 28 0 273 270 135 18 chr18 3286728 3286839 -82702095 - MIR3 SINE MIR 0 208 85 740 309 53 25 chr18 3286901 3287186 -82701748 + L2 LINE L2 946 1238 -2076 694 251 38 15 chr18 3287226 3287431 -82701503 - MLT1H1 LTR MaLR -297 252 1 2509 71 0 6 chr18 3287817 3288128 -82700806 + AluY SINE Alu 1 309 -2 1539 50 6 0 chr18 3288517 3288731 -82700203 + L1PA3 LINE L1 5974 6188 0 317 214 0 0 chr18 3289238 3289294 -82699640 - MLT1K LTR MaLR -349 239 184 1635 188 68 31 chr18 3289373 3289725 -82699209 + MLT1A1 LTR MaLR 1 365 0 435 286 101 71 chr18 3292291 3292508 -82696426 + L1MEd LINE L1 13 245 -5874 2174 119 3 7 chr18 3292508 3292811 -82696123 - AluSq SINE Alu -11 302 1 435 286 101 71 chr18 3292811 3292929 -82696005 + L1MEd LINE L1 245 358 -5761 273 211 88 44 chr18 3293020 3293134 -82695800 - MLT1H1 LTR MaLR -115 440 322 380 284 20 40 chr18 3293205 3293353 -82695581 + LTR16B LTR ERVL 320 464 0 25 0 0 0 chr18 3294465 3294490 -82694444 + AT_rich Low_complexity Low_complexity 1 25 0 1697 134 15 86 chr18 3294710 3295072 -82693862 - AluJo SINE Alu 0 312 1 2067 105 0 0 chr18 3295495 3295761 -82693173 + AluSx SINE Alu 30 295 -17 2051 114 42 7 chr18 3296193 3296482 -82692452 - AluSx SINE Alu -13 299 1 1276 128 80 0 chr18 3296482 3296669 -82692265 - AluSg/x SINE Alu -10 300 99 264 298 47 79 chr18 3296793 3297008 -82691926 + MLT1K LTR MaLR 378 585 -3 1226 99 6 12 chr18 3297356 3297527 -82691407 - AluSp SINE Alu -5 308 139 493 194 87 0 chr18 3298116 3298219 -82690715 + MER94 DNA DNA 1 112 -22 2152 104 3 17 chr18 3298639 3298936 -82689998 - AluSq SINE Alu -20 293 1 769 144 9 0 chr18 3298965 3299076 -82689858 + FLAM_C SINE Alu 21 132 -11 1282 206 0 4 chr18 3299467 3299720 -82689214 - AluJo SINE Alu -7 305 54 1764 142 15 4 chr18 3299722 3299989 -82688945 - AluSx SINE Alu -42 270 1 1917 125 3 14 chr18 3299992 3300279 -82688655 - AluSx SINE Alu -4 308 25 308 203 58 0 chr18 3300285 3300354 -82688580 + MIR SINE MIR 121 193 -69 579 231 126 7 chr18 3300459 3300602 -82688332 - MER45A DNA AcHobo -6 172 13 506 203 0 25 chr18 3301011 3301174 -82687760 + GA-rich Low_complexity Low_complexity 1 159 0 1910 120 3 55 chr18 3301510 3301818 -82687116 + AluSg SINE Alu 1 292 -18 26 0 0 0 chr18 3301818 3301844 -82687090 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr18 3302299 3302327 -82686607 + AT_rich Low_complexity Low_complexity 1 28 0 354 309 90 90 chr18 3302654 3302910 -82686024 - L2 LINE L2 0 3272 3017 2137 118 3 0 chr18 3303363 3303659 -82685275 - AluSc SINE Alu -12 297 1 1253 163 5 0 chr18 3303755 3303951 -82684983 + AluJb SINE Alu 85 281 -31 1691 246 46 57 chr18 3304966 3305131 -82683803 + L1MC4a LINE L1 5266 5431 -2377 2249 92 10 0 chr18 3305131 3305426 -82683508 + AluSq SINE Alu 1 298 -15 1691 246 46 57 chr18 3305426 3305805 -82683129 + L1MC4a LINE L1 5431 5804 -2004 1821 119 66 11 chr18 3305805 3306091 -82682843 + AluSq SINE Alu 1 302 -11 1691 246 46 57 chr18 3306091 3306217 -82682717 + L1MC4a LINE L1 5804 5930 -1878 23 33 0 0 chr18 3306396 3306426 -82682508 + AT_rich Low_complexity Low_complexity 1 30 0 883 119 7 42 chr18 3307751 3307894 -82681040 - AluSq/x SINE Alu -174 138 1 1672 164 7 14 chr18 3310322 3310609 -82678325 - AluJo SINE Alu -27 285 1 1714 144 29 4 chr18 3310827 3311105 -82677829 + AluSx SINE Alu 1 308 0 208 0 0 0 chr18 3311105 3311128 -82677806 + (CAAA)n Simple_repeat Simple_repeat 2 64 0 491 244 57 74 chr18 3311725 3311853 -82677081 - MER5B DNA MER1_type 0 178 52 734 191 15 0 chr18 3311853 3311984 -82676950 + FLAM_A SINE Alu 1 133 0 491 244 57 74 chr18 3311984 3312031 -82676903 - MER5B DNA MER1_type -126 52 6 268 290 19 56 chr18 3312302 3312464 -82676470 - MLT1K LTR MaLR -11 577 422 2271 125 0 0 chr18 3312776 3313088 -82675846 + AluSx SINE Alu 1 312 0 701 321 91 27 chr18 3313261 3313710 -82675224 - L2 LINE L2 -531 2783 2306 264 324 116 42 chr18 3313861 3314102 -82674832 - L2 LINE L2 -2717 597 339 363 250 102 8 chr18 3314755 3314883 -82674051 + LTR67 LTR ERVL 418 557 0 27 0 0 0 chr18 3315083 3315110 -82673824 + AT_rich Low_complexity Low_complexity 1 27 0 2238 110 7 0 chr18 3315164 3315472 -82673462 - AluSx SINE Alu -2 310 1 252 336 109 0 chr18 3316949 3317059 -82671875 + L2 LINE L2 3151 3272 0 2470 68 0 0 chr18 3317230 3317523 -82671411 + AluSg SINE Alu 1 293 -17 1373 147 4 43 chr18 3317775 3318006 -82670928 + AluJb SINE Alu 75 296 -16 2370 70 0 0 chr18 3318403 3318688 -82670246 - AluSc SINE Alu -24 285 1 336 235 134 61 chr18 3318835 3318998 -82669936 + MIR SINE MIR 34 204 -58 182 229 0 16 chr18 3319807 3319868 -82669066 + GA-rich Low_complexity Low_complexity 5 64 0 344 211 49 73 chr18 3320174 3320297 -82668637 + MLT1I LTR MaLR 273 392 -17 758 270 132 21 chr18 3320393 3320818 -82668116 + L2 LINE L2 2741 3240 -73 275 201 97 3 chr18 3320829 3320932 -82668002 + L1MDa LINE L1 1813 1965 -4620 * 1346 216 78 57 chr18 3320924 3321342 -82667592 + L1MDa LINE L1 2176 2584 -3956 1877 127 0 109 chr18 3321342 3321682 -82667252 + AluSx SINE Alu 1 303 -9 1346 216 78 57 chr18 3321682 3321974 -82666960 + L1MDa LINE L1 2584 2868 -3672 665 180 33 0 chr18 3321974 3322096 -82666838 + FLAM_A SINE Alu 1 126 -7 1346 216 78 57 chr18 3322096 3322199 -82666735 + L1MDa LINE L1 2868 2967 -3573 1894 136 0 36 chr18 3322199 3322507 -82666427 + AluSx SINE Alu 2 298 -14 1346 216 78 57 chr18 3322507 3322688 -82666246 + L1MDa LINE L1 2967 3169 -3371 276 307 165 0 chr18 3322717 3322844 -82666090 + MIR SINE MIR 84 231 -31 2190 76 13 29 chr18 3322960 3323274 -82665660 + L1PA10 LINE L1 5857 6165 -3 2364 98 3 0 chr18 3323713 3324018 -82664916 + AluSp SINE Alu 1 306 -7 1493 228 58 3 chr18 3324378 3324724 -82664210 + MLT1A1 LTR MaLR 1 365 0 371 158 0 0 chr18 3324903 3324960 -82663974 + MIR SINE MIR 44 100 -162 22 0 0 0 chr18 3324962 3324984 -82663950 + AT_rich Low_complexity Low_complexity 1 22 0 189 275 220 0 chr18 3325021 3325112 -82663822 + MIR SINE MIR 94 204 -58 2137 120 0 7 chr18 3325409 3325709 -82663225 + AluSx SINE Alu 1 298 -14 195 371 58 47 chr18 3325719 3325869 -82663065 + MIR SINE MIR 33 183 -66 374 247 24 0 chr18 3326191 3326276 -82662658 - L2 LINE L2 0 3313 3227 700 224 7 0 chr18 3326293 3326440 -82662494 - L1PA16 LINE L1 -25 6141 5994 934 305 64 13 chr18 3326792 3327166 -82661768 + L2 LINE L2 1734 2126 -1188 1338 224 200 4 chr18 3327385 3327696 -82661238 + L1ME LINE L1 4553 4802 -1344 2269 115 0 0 chr18 3327696 3328001 -82660933 + AluSp SINE Alu 1 305 -8 1338 224 200 4 chr18 3328001 3328219 -82660715 + L1ME LINE L1 4802 5186 -960 2107 95 7 3 chr18 3328230 3328524 -82660410 + AluY SINE Alu 11 305 -6 700 213 38 33 chr18 3328539 3328722 -82660212 + L1MD2 LINE L1 6159 6342 -17 1102 216 58 8 chr18 3328734 3329125 -82659809 + L1ME LINE L1 5174 5581 -585 616 99 0 0 chr18 3329126 3329207 -82659727 - AluSg/x SINE Alu -16 294 214 602 236 32 2 chr18 3329328 3329500 -82659434 + L1ME LINE L1 5596 5772 -398 1708 191 158 26 chr18 3329520 3329975 -82658959 + MLT1E2 LTR MaLR 64 571 -55 1955 166 0 3 chr18 3329975 3330282 -82658652 - AluJb SINE Alu -6 306 1 1708 191 158 26 chr18 3330282 3330347 -82658587 + MLT1E2 LTR MaLR 571 626 0 285 248 76 9 chr18 3330348 3330453 -82658481 + MLT1E2-int LTR MaLR 2 113 -1258 1338 252 33 0 chr18 3330467 3330804 -82658130 + MLT1E2-int LTR MaLR 259 606 -765 241 245 19 0 chr18 3331052 3331105 -82657829 + GA-rich Low_complexity Low_complexity 6 59 0 290 333 58 29 chr18 3331371 3331542 -82657392 - MIR SINE MIR -6 256 81 243 0 0 0 chr18 3333795 3333822 -82655112 + (A)n Simple_repeat Simple_repeat 1 27 0 708 262 124 9 chr18 3333828 3334053 -82654881 - MIR SINE MIR -11 251 1 441 283 187 15 chr18 3334470 3334668 -82654266 + MIR SINE MIR 23 254 -8 302 125 107 0 chr18 3335436 3335492 -82653442 + L1ME1 LINE L1 5853 5914 -252 1924 134 3 34 chr18 3335933 3336253 -82652681 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr18 3336575 3336597 -82652337 + AT_rich Low_complexity Low_complexity 1 22 0 1629 57 0 43 chr18 3336747 3336957 -82651977 + AluY SINE Alu 1 201 -110 386 252 147 129 chr18 3337424 3337674 -82651260 + L1M4 LINE L1 3539 3783 -2363 2331 72 3 7 chr18 3337674 3337967 -82650967 + AluY SINE Alu 1 292 -19 386 252 147 129 chr18 3337967 3338431 -82650503 + L1M4 LINE L1 3783 4266 -1880 288 287 72 22 chr18 3338432 3338655 -82650279 + L1M4 LINE L1 4423 4656 -1490 295 151 0 0 chr18 3339102 3339155 -82649779 + L1P5 LINE L1 5428 5480 -676 1954 150 3 7 chr18 3339168 3339462 -82649472 + AluJo SINE Alu 1 293 -19 835 124 71 12 chr18 3339464 3339633 -82649301 + L1M3 LINE L1 5595 5773 -407 200 219 0 0 chr18 3339932 3339973 -82648961 + L2 LINE L2 3264 3304 -9 2005 123 35 3 chr18 3339984 3340268 -82648666 + AluSx SINE Alu 1 293 -19 1374 101 0 44 chr18 3340276 3340504 -82648430 + L1PA13 LINE L1 5946 6163 0 353 244 163 32 chr18 3340613 3340736 -82648198 + L2 LINE L2 3134 3272 0 2091 84 87 3 chr18 3340768 3341094 -82647840 + AluY SINE Alu 1 350 0 322 177 32 0 chr18 3343135 3343197 -82645737 + MER21A LTR ERV1 2 65 -866 372 175 0 0 chr18 3343207 3343270 -82645664 + MER21B LTR ERV1 232 294 -569 2145 120 0 0 chr18 3343382 3343681 -82645253 + AluSq SINE Alu 1 299 -14 25 31 0 0 chr18 3345509 3345541 -82643393 + AT_rich Low_complexity Low_complexity 1 32 0 321 297 22 43 chr18 3345621 3345759 -82643175 - MIR3 SINE MIR -72 136 2 262 294 39 69 chr18 3347585 3347687 -82641247 + L2 LINE L2 3166 3264 -8 253 172 207 35 chr18 3348485 3348572 -82640362 + MER34C LTR ERV1 271 372 -213 2376 109 53 0 chr18 3348581 3348975 -82639959 + L1MA5A LINE L1 5873 6287 -10 472 209 52 8 chr18 3349138 3349272 -82639662 + MER4B-int LTR ERV1 4161 4300 -2458 22 0 0 0 chr18 3349417 3349439 -82639495 + AT_rich Low_complexity Low_complexity 1 22 0 597 146 126 0 chr18 3349824 3349927 -82639007 + FLAM_C SINE Alu 1 116 -17 1534 139 0 133 chr18 3349959 3350118 -82638816 + AluJo SINE Alu 1 93 -209 1882 159 7 0 chr18 3350118 3350407 -82638527 + AluJb SINE Alu 1 291 -21 1534 139 0 133 chr18 3350407 3350585 -82638349 + AluJo SINE Alu 93 293 -9 1964 129 49 22 chr18 3350628 3351038 -82637896 - Charlie1b DNA MER1_type -34 489 69 645 256 46 0 chr18 3351085 3351280 -82637654 + L1ME1 LINE L1 5959 6162 -4 425 241 18 36 chr18 3351574 3351686 -82637248 - MIR SINE MIR -8 254 145 2324 81 3 7 chr18 3351691 3351988 -82636946 - AluSg SINE Alu -14 296 1 2291 107 3 0 chr18 3353893 3354201 -82634733 - AluSx SINE Alu -3 309 1 322 271 59 35 chr18 3354201 3354402 -82634532 - L1ME LINE L1 -465 5656 5442 206 163 41 0 chr18 3354408 3354457 -82634477 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 2512 71 3 3 chr18 3355204 3355513 -82633421 - AluSg1 SINE Alu 0 309 1 535 283 118 29 chr18 3355659 3355938 -82632996 - LTR67 LTR ERVL 0 557 254 260 244 39 0 chr18 3356055 3356133 -82632801 - LTR67 LTR ERVL -476 81 1 1196 268 109 49 chr18 3356147 3356896 -82632038 + L2 LINE L2 2442 3230 -83 275 297 36 20 chr18 3357827 3358022 -82630912 + L1M4 LINE L1 4733 4930 -1216 463 127 25 13 chr18 3358152 3358231 -82630703 + AluSg/x SINE Alu 209 288 -21 393 261 149 36 chr18 3358268 3358585 -82630349 - L1ME LINE L1 -1325 4821 4464 2163 126 3 22 chr18 3358585 3358618 -82630316 - AluSq SINE Alu -2 311 279 315 0 0 0 chr18 3358618 3358653 -82630281 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2163 126 3 22 chr18 3358653 3358936 -82629998 - AluSq SINE Alu -34 279 1 393 261 149 36 chr18 3358936 3358947 -82629987 - L1ME LINE L1 -1682 4464 4456 2340 78 14 3 chr18 3359978 3360274 -82628660 + AluSx SINE Alu 1 299 -13 2162 113 0 13 chr18 3360561 3360862 -82628072 + AluSx SINE Alu 1 297 -15 285 224 19 9 chr18 3360862 3360969 -82627965 + (TA)n Simple_repeat Simple_repeat 1 108 0 2055 142 45 6 chr18 3361832 3362184 -82626750 - MER47A DNA MER2_type 0 366 1 1951 159 0 0 chr18 3363010 3363300 -82625634 + AluJb SINE Alu 2 291 -21 1084 263 54 26 chr18 3365377 3365727 -82623207 - L2 LINE L2 0 3313 2954 23 68 0 0 chr18 3366487 3366531 -82622403 + AT_rich Low_complexity Low_complexity 1 44 0 29 0 0 25 chr18 3367729 3367746 -82621188 + AT_rich Low_complexity Low_complexity 1 17 -22 2141 107 3 7 chr18 3367746 3368045 -82620889 - AluSx SINE Alu -14 298 1 29 0 0 25 chr18 3368045 3368067 -82620867 + AT_rich Low_complexity Low_complexity 17 39 0 23 33 0 0 chr18 3368138 3368168 -82620766 + AT_rich Low_complexity Low_complexity 1 30 0 27 0 0 0 chr18 3369480 3369507 -82619427 + AT_rich Low_complexity Low_complexity 1 27 0 1681 20 0 0 chr18 3370462 3370661 -82618273 - L1PA3 LINE L1 0 6155 5957 21 36 0 0 chr18 3370699 3370727 -82618207 + AT_rich Low_complexity Low_complexity 1 28 0 2077 98 47 7 chr18 3371102 3371398 -82617536 + AluSx SINE Alu 1 308 -4 298 282 248 29 chr18 3371706 3371912 -82617022 - MIR SINE MIR -10 252 2 1409 199 12 12 chr18 3373107 3373428 -82615506 - MER33 DNA MER1_type -1 323 3 23 54 0 0 chr18 3373439 3373476 -82615458 + AT_rich Low_complexity Low_complexity 1 37 0 1840 128 70 3 chr18 3374447 3374760 -82614174 + MER44D DNA MER2_type 6 609 0 201 183 28 14 chr18 3377618 3377689 -82611245 + GA-rich Low_complexity Low_complexity 4 75 0 1890 138 0 44 chr18 3377956 3378284 -82610650 + AluSq SINE Alu 1 315 0 839 192 73 4 chr18 3378602 3378799 -82610135 + L1ME LINE L1 5476 5679 -487 400 289 39 8 chr18 3378869 3378997 -82609937 - MER77 LTR ERV1 -6 599 468 680 199 112 98 chr18 3378999 3379140 -82609794 + L1MC4 LINE L1 7611 7749 -293 2765 13 0 0 chr18 3379140 3379446 -82609488 + AluY SINE Alu 1 306 -5 680 199 112 98 chr18 3379446 3379590 -82609344 + L1MC4 LINE L1 7749 7900 -142 1663 171 33 10 chr18 3379678 3379982 -82608952 + AluJo SINE Alu 1 311 -1 2184 86 4 0 chr18 3380170 3380476 -82608458 + AluSg SINE Alu 1 307 0 23 33 0 0 chr18 3381358 3381388 -82607546 + AT_rich Low_complexity Low_complexity 1 30 0 2227 192 152 11 chr18 3381398 3381965 -82606969 - L1MC4a LINE L1 -155 7653 7007 360 327 26 13 chr18 3382318 3382471 -82606463 - MIR SINE MIR -80 182 28 22 0 0 0 chr18 3382735 3382757 -82606177 + AT_rich Low_complexity Low_complexity 1 22 0 2418 235 82 43 chr18 3383950 3384060 -82604874 + L1MEc LINE L1 22 126 -6270 273 29 0 0 chr18 3384060 3384094 -82604840 + (TTGG)n Simple_repeat Simple_repeat 3 36 0 2418 235 82 43 chr18 3384094 3384850 -82604084 + L1MEc LINE L1 126 922 -5474 233 236 56 0 chr18 3385125 3385197 -82603737 + L1MEc LINE L1 2664 2739 -3476 1682 197 33 88 chr18 3385205 3385808 -82603126 + L1MEc LINE L1 2713 3282 -2933 * 3374 151 34 2 chr18 3385806 3386426 -82602508 + L1MB4 LINE L1 5223 5861 -319 908 165 124 102 chr18 3386527 3386842 -82602092 - MLT1D LTR MaLR -182 323 2 691 201 0 22 chr18 3386990 3387124 -82601810 - FLAM_A SINE Alu -2 131 1 29 0 0 0 chr18 3387796 3387825 -82601109 + AT_rich Low_complexity Low_complexity 1 29 0 2282 87 0 3 chr18 3387840 3388138 -82600796 - AluSg SINE Alu -13 297 1 2049 130 0 16 chr18 3388427 3388743 -82600191 - AluSx SINE Alu -1 311 1 342 0 0 0 chr18 3389098 3389136 -82599798 + (TG)n Simple_repeat Simple_repeat 2 39 0 1856 115 4 0 chr18 3389137 3389390 -82599544 - AluSx SINE Alu -14 298 45 312 27 0 0 chr18 3389966 3390003 -82598931 + (TTTTA)n Simple_repeat Simple_repeat 2 38 0 1913 86 37 7 chr18 3390006 3390275 -82598659 - AluSx SINE Alu -35 277 1 208 184 0 20 chr18 3391274 3391323 -82597611 + (TA)n Simple_repeat Simple_repeat 2 49 0 243 103 35 17 chr18 3391339 3391397 -82597537 + (TA)n Simple_repeat Simple_repeat 1 59 0 189 301 36 72 chr18 3392005 3392088 -82596846 - L2 LINE L2 0 3272 3193 7735 20 1 0 chr18 3392317 3393268 -82595666 + L1PA3 LINE L1 5203 6154 -1 216 0 0 0 chr18 3393273 3393297 -82595637 + (TAAAA)n Simple_repeat Simple_repeat 3 26 0 209 356 246 14 chr18 3393297 3393531 -82595403 - L2 LINE L2 -449 2865 2687 2065 121 3 0 chr18 3393531 3393828 -82595106 + AluSq SINE Alu 3 300 -13 209 356 246 14 chr18 3393828 3394088 -82594846 - L2 LINE L2 -627 2687 2256 696 209 305 24 chr18 3394369 3394618 -82594316 - L2 LINE L2 0 3313 2995 350 315 79 0 chr18 3395946 3396073 -82592861 - L2 LINE L2 -2 3270 3134 2235 89 3 0 chr18 3396410 3396701 -82592233 + AluSg SINE Alu 1 292 -18 330 216 155 35 chr18 3396794 3396910 -82592024 + L1MB5 LINE L1 6018 6147 -27 448 350 164 8 chr18 3398942 3399431 -82589503 - L2 LINE L2 -720 2594 2030 266 106 21 0 chr18 3399433 3399480 -82589454 + (TA)n Simple_repeat Simple_repeat 1 48 0 286 289 29 0 chr18 3400003 3400107 -82588827 + L1M4 LINE L1 3625 3731 -2415 352 332 144 43 chr18 3400138 3400394 -82588540 - L2 LINE L2 -4 3268 2987 1882 149 7 0 chr18 3400484 3400779 -82588155 + AluJb SINE Alu 3 299 -13 468 352 115 28 chr18 3400806 3401337 -82587597 - L2 LINE L2 -452 2862 2286 525 32 0 0 chr18 3401352 3401415 -82587519 + (TG)n Simple_repeat Simple_repeat 2 64 0 38 51 0 0 chr18 3402183 3402242 -82586692 + AT_rich Low_complexity Low_complexity 1 59 0 24 32 0 0 chr18 3403505 3403536 -82585398 + AT_rich Low_complexity Low_complexity 1 31 0 350 41 0 20 chr18 3404032 3404081 -82584853 + (TA)n Simple_repeat Simple_repeat 1 48 0 234 229 189 29 chr18 3404081 3404256 -82584678 - L1ME LINE L1 -345 5776 5574 28 29 0 0 chr18 3404256 3404291 -82584643 + AT_rich Low_complexity Low_complexity 1 35 0 2066 140 0 0 chr18 3404295 3404587 -82584347 - AluSx SINE Alu -20 292 1 659 177 0 46 chr18 3405467 3405597 -82583337 + FLAM_A SINE Alu 5 128 -5 2330 102 0 0 chr18 3407127 3407430 -82581504 - AluSq SINE Alu -10 303 1 686 196 34 0 chr18 3408084 3408232 -82580702 - MER105 DNA DNA -5 199 47 349 281 0 21 chr18 3408254 3408350 -82580584 + MIR3 SINE MIR 100 193 -15 2229 101 13 0 chr18 3408361 3408668 -82580266 - AluSx SINE Alu 0 312 2 1098 225 9 0 chr18 3409195 3409408 -82579526 + MER58A DNA MER1_type 1 215 -9 741 274 38 15 chr18 3409629 3409969 -82578965 + L1ME3A LINE L1 4947 5294 -852 409 275 38 23 chr18 3410106 3410237 -82578697 + L1ME3A LINE L1 5451 5583 -750 2248 91 0 0 chr18 3410238 3410706 -82578228 + AluSc SINE Alu 1 468 0 1146 110 0 11 chr18 3410524 3410742 -82578192 + (GAAA)n Simple_repeat Simple_repeat 1 216 0 1266 250 58 23 chr18 3410825 3411253 -82577681 + MLT1C LTR MaLR 6 448 -19 1397 169 65 34 chr18 3411310 3411750 -82577184 - MLT1D LTR MaLR -2 503 1 343 268 102 8 chr18 3411751 3411892 -82577042 + L1ME3A LINE L1 5727 5885 -281 1954 163 3 0 chr18 3412105 3412406 -82576528 - AluSx SINE Alu -10 302 1 23 68 0 0 chr18 3412445 3412489 -82576445 + AT_rich Low_complexity Low_complexity 1 44 0 1420 144 110 24 chr18 3412796 3412870 -82576064 - MER46B DNA MER2_type -2495 236 170 233 29 29 0 chr18 3412870 3412904 -82576030 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1420 144 110 24 chr18 3412904 3413120 -82575814 - MER46B DNA MER2_type -2561 170 46 1125 170 24 2 chr18 3413120 3413368 -82575566 + AluJb SINE Alu 1 302 -10 751 169 13 65 chr18 3413431 3413585 -82575349 + MER58B DNA MER1_type 195 340 -1 253 289 135 0 chr18 3413711 3413815 -82575119 - MIR3 SINE MIR -7 201 84 385 150 113 0 chr18 3414138 3414218 -82574716 + MER3 DNA MER1_type 9 97 -112 5599 132 43 3 chr18 3414244 3415179 -82573755 + L1MA4 LINE L1 5329 6300 0 1142 200 40 4 chr18 3415183 3415408 -82573526 + L1PA16 LINE L1 5805 6037 -129 271 189 108 0 chr18 3415416 3415490 -82573444 + L1PA16 LINE L1 6082 6163 -3 366 58 19 221 chr18 3415538 3415591 -82573343 + MER5A DNA MER1_type 30 54 -135 1678 159 7 31 chr18 3415591 3415745 -82573189 - AluJo SINE Alu -30 282 137 2141 129 3 3 chr18 3415745 3416055 -82572879 - AluSx SINE Alu -2 310 1 1678 159 7 31 chr18 3416055 3416189 -82572745 - AluJo SINE Alu -175 137 1 366 58 19 221 chr18 3416189 3416239 -82572695 + MER5A DNA MER1_type 54 112 -77 1854 206 34 123 chr18 3416272 3416865 -82572069 - L1ME1 LINE L1 -44 6122 5477 2199 126 3 0 chr18 3416865 3417166 -82571768 + AluSx SINE Alu 1 302 -10 750 112 9 0 chr18 3417172 3417279 -82571655 + HY1 scRNA scRNA 1 108 -4 811 60 26 0 chr18 3417280 3417397 -82571537 + (GAAA)n Simple_repeat Simple_repeat 1 120 0 1854 206 34 123 chr18 3417397 3417508 -82571426 - L1ME1 LINE L1 -574 5592 5473 318 269 86 0 chr18 3417515 3417608 -82571326 - L3 LINE CR1 -141 1436 1336 26 0 0 0 chr18 3417812 3417838 -82571096 + AT_rich Low_complexity Low_complexity 1 26 0 4946 172 108 81 chr18 3417838 3417982 -82570952 - L1MC4 LINE L1 -5 8037 7898 1663 174 0 22 chr18 3417982 3418257 -82570677 - AluJo SINE Alu -25 287 19 4946 172 108 81 chr18 3418257 3418549 -82570385 - L1MC4 LINE L1 -144 7898 7615 191 32 65 0 chr18 3418549 3418580 -82570354 + T-rich Low_complexity Low_complexity 2 34 0 2062 114 7 0 chr18 3418582 3418862 -82570072 - AluSx SINE Alu -30 282 1 4946 172 108 81 chr18 3418862 3419365 -82569569 - L1MC4 LINE L1 -427 7615 7127 2467 75 0 13 chr18 3419365 3419671 -82569263 - AluSp SINE Alu -11 302 1 4946 172 108 81 chr18 3419671 3419962 -82568972 - L1MC4 LINE L1 -915 7127 6845 1579 168 25 14 chr18 3419962 3420248 -82568686 + AluJo SINE Alu 12 300 -12 4946 172 108 81 chr18 3420248 3420337 -82568597 - L1MC4 LINE L1 -1197 6845 6760 2251 116 0 0 chr18 3420337 3420640 -82568294 + AluSx SINE Alu 1 303 -9 4946 172 108 81 chr18 3420640 3420751 -82568183 - L1MC4 LINE L1 -1282 6760 6562 1881 279 59 52 chr18 3420754 3421460 -82567474 + ERVL LTR ERVL 929 1644 -3352 315 91 55 0 chr18 3421460 3421515 -82567419 - L1MC2 LINE L1 -5 6339 6282 1881 279 59 52 chr18 3421515 3421729 -82567205 + ERVL LTR ERVL 1644 1855 -3141 631 106 21 0 chr18 3421729 3421823 -82567111 - AluSg/x SINE Alu -8 304 209 2107 118 3 20 chr18 3422007 3422312 -82566622 + AluSc SINE Alu 1 300 -9 2759 111 11 0 chr18 3422312 3422689 -82566245 + L1PA16 LINE L1 5777 6157 -9 4816 103 89 58 chr18 3422710 3423176 -82565758 + Tigger3(Golem) DNA MER2_type 2147 2652 -376 188 35 35 0 chr18 3423176 3423205 -82565729 + (CTCA)n Simple_repeat Simple_repeat 2 31 0 4816 103 89 58 chr18 3423205 3423594 -82565340 + Tigger3(Golem) DNA MER2_type 2652 3028 0 2349 285 69 66 chr18 3423628 3424205 -82564729 + ERVL LTR ERVL 1922 2496 -2643 1814 177 0 7 chr18 3424205 3424499 -82564435 - AluJb SINE Alu -20 292 1 2349 285 69 66 chr18 3424499 3425185 -82563749 + ERVL LTR ERVL 2496 3227 -1912 1175 317 40 30 chr18 3425393 3426082 -82562852 + ERVL LTR ERVL 3807 4869 -548 1915 115 0 124 chr18 3426098 3426237 -82562697 + AluJo SINE Alu 1 156 -146 2213 75 0 0 chr18 3426237 3426502 -82562432 + AluSc SINE Alu 17 281 -28 198 0 0 0 chr18 3426502 3426524 -82562410 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1915 115 0 124 chr18 3426524 3426721 -82562213 + AluJo SINE Alu 154 296 -6 368 276 128 41 chr18 3426872 3427191 -82561743 - L1M4 LINE L1 -3123 3023 2677 308 234 105 121 chr18 3427297 3427421 -82561513 - MIR SINE MIR -139 123 2 3038 56 3 3 chr18 3427572 3427927 -82561007 + THE1A LTR MaLR 1 355 0 12721 88 2 14 chr18 3427927 3429526 -82559408 + THE1A-int LTR MaLR 1 1580 0 2929 65 3 6 chr18 3429526 3429882 -82559052 + THE1A LTR MaLR 1 355 0 2265 98 10 0 chr18 3431542 3431839 -82557095 - AluSx SINE Alu -12 300 1 345 24 0 0 chr18 3432582 3432624 -82556310 + (TG)n Simple_repeat Simple_repeat 2 43 0 213 39 0 0 chr18 3432651 3432677 -82556257 + (T)n Simple_repeat Simple_repeat 1 26 0 2274 100 3 0 chr18 3433087 3433387 -82555547 - AluSx SINE Alu -9 303 3 2514 35 3 0 chr18 3433661 3433951 -82554983 + AluY SINE Alu 3 293 -18 2434 154 54 7 chr18 3433962 3434385 -82554549 - L1MC1 LINE L1 -9 6324 5882 507 289 37 43 chr18 3434431 3434618 -82554316 + MER5A DNA MER1_type 1 186 -3 1818 156 0 32 chr18 3434681 3434989 -82553945 + AluJb SINE Alu 1 298 -14 1851 156 30 10 chr18 3435857 3436159 -82552775 - AluJb SINE Alu -4 308 1 780 118 0 37 chr18 3436434 3436569 -82552365 - L1MA8 LINE L1 -4 6287 6158 237 315 22 0 chr18 3436690 3436779 -82552155 + L2 LINE L2 2395 2485 -829 2311 99 3 0 chr18 3436779 3437072 -82551862 - AluSg SINE Alu -16 294 1 2233 112 3 0 chr18 3437961 3438264 -82550670 - AluSx SINE Alu -8 304 1 635 272 125 36 chr18 3438410 3438689 -82550245 - LTR67 LTR ERVL 0 557 254 294 244 39 0 chr18 3438806 3438884 -82550050 - LTR67 LTR ERVL -476 81 1 1187 268 109 49 chr18 3438898 3439647 -82549287 + L2 LINE L2 2442 3230 -83 375 310 69 16 chr18 3440578 3440823 -82548111 + L1ME3 LINE L1 4733 4990 -1156 1793 159 21 3 chr18 3440846 3441135 -82547799 - AluSx SINE Alu -18 294 1 656 236 124 101 chr18 3441135 3441601 -82547333 + L1ME3 LINE L1 5395 5871 -291 1949 97 4 0 chr18 3442007 3442266 -82546668 - AluSx SINE Alu -9 303 44 2226 111 3 0 chr18 3442346 3442643 -82546291 - AluSx SINE Alu -14 298 1 1756 190 0 0 chr18 3442948 3443253 -82545681 + AluJb SINE Alu 3 307 -5 23 0 0 0 chr18 3443390 3443413 -82545521 + AT_rich Low_complexity Low_complexity 1 23 0 2223 96 45 0 chr18 3443511 3443802 -82545132 - AluSc SINE Alu -5 304 1 787 115 0 0 chr18 3443839 3443943 -82544991 - U6 snRNA snRNA -3 104 1 478 245 137 55 chr18 3444149 3444203 -82544731 + MLT1F LTR MaLR 126 174 -368 2110 142 3 0 chr18 3444203 3444512 -82544422 + AluSx SINE Alu 1 310 -2 478 245 137 55 chr18 3444512 3444839 -82544095 + MLT1F LTR MaLR 174 503 -39 23 0 0 0 chr18 3444839 3444862 -82544072 + AT_rich Low_complexity Low_complexity 1 23 0 1759 185 7 3 chr18 3445276 3445574 -82543360 + AluJo SINE Alu 1 299 -13 2437 83 7 0 chr18 3445713 3446014 -82542920 - AluSp SINE Alu -10 303 1 849 127 8 8 chr18 3446581 3446699 -82542235 + FLAM_C SINE Alu 1 118 -15 1314 154 199 20 chr18 3447338 3447630 -82541304 - MER2 DNA MER2_type 0 344 1 343 140 0 0 chr18 3447798 3447848 -82541086 + MLT1F LTR MaLR 493 542 0 33 56 0 0 chr18 3449678 3449732 -82539202 + GC_rich Low_complexity Low_complexity 1 54 0 372 246 42 17 chr18 3451309 3451427 -82537507 + L2 LINE L2 3192 3312 -1 338 243 173 54 chr18 3451747 3451932 -82537002 - L1ME4a LINE L1 -223 5898 5692 1189 130 28 47 chr18 3451945 3452160 -82536774 - AluJo SINE Alu -99 213 3 299 293 79 30 chr18 3452166 3452330 -82536604 - L1ME4a LINE L1 -422 5699 5528 237 369 57 33 chr18 3452760 3452882 -82536052 - MIR SINE MIR -113 149 25 240 133 0 0 chr18 3452901 3452946 -82535988 + LTR66 LTR ERVL 394 438 -172 369 233 0 0 chr18 3452949 3453039 -82535895 + (TA)n Simple_repeat Simple_repeat 2 91 0 2226 93 0 14 chr18 3453202 3453492 -82535442 - AluSx SINE Alu -22 290 5 3755 77 15 0 chr18 3453601 3454067 -82534867 + L1PA8 LINE L1 5697 6169 -3 260 100 0 20 chr18 3454579 3454593 -82534341 + (GAAA)n Simple_repeat Simple_repeat 3 16 -35 2843 19 0 6 chr18 3454593 3454913 -82534021 + AluYb8 SINE Alu 1 318 0 260 100 0 20 chr18 3454913 3454948 -82533986 + (GAAA)n Simple_repeat Simple_repeat 16 51 0 2082 111 3 40 chr18 3455081 3455405 -82533529 + AluSx SINE Alu 1 312 0 327 304 133 17 chr18 3455554 3455794 -82533140 - L1ME LINE L1 -514 5648 5381 331 261 96 84 chr18 3455803 3455833 -82533101 - L1ME LINE L1 -1015 5131 5103 1694 165 0 37 chr18 3455833 3456130 -82532804 - AluJb SINE Alu -26 286 1 331 261 96 84 chr18 3456130 3456432 -82532502 - L1ME LINE L1 -1043 5103 4795 2425 55 0 3 chr18 3456440 3456733 -82532201 - AluY SINE Alu -19 292 1 879 249 47 99 chr18 3456938 3457698 -82531236 - L1MC5 LINE L1 -285 7676 6956 2273 108 0 0 chr18 3458042 3458337 -82530597 - AluSg SINE Alu -15 295 1 21 71 0 0 chr18 3458793 3458835 -82530099 + AT_rich Low_complexity Low_complexity 1 42 0 2355 105 0 0 chr18 3460593 3460898 -82528036 - AluSx SINE Alu -7 305 1 410 302 72 72 chr18 3461038 3461260 -82527674 - MIR SINE MIR -33 229 8 913 239 126 45 chr18 3461286 3461642 -82527292 + L2 LINE L2 1668 2052 -1262 1222 192 0 69 chr18 3461645 3461782 -82527152 - AluJo SINE Alu -64 248 134 1531 211 13 19 chr18 3461782 3462090 -82526844 + AluJo SINE Alu 1 306 -6 1222 192 0 69 chr18 3462090 3462197 -82526737 - AluJo SINE Alu -178 134 21 1377 275 133 62 chr18 3462199 3463341 -82525593 + L2 LINE L2 2038 3307 -6 252 86 0 0 chr18 3463346 3463381 -82525553 - AluJo SINE Alu -267 35 1 2407 74 0 10 chr18 3463731 3464043 -82524891 - AluY SINE Alu -2 309 1 2205 104 10 3 chr18 3464368 3464667 -82524267 - AluSq SINE Alu -11 302 2 213 333 141 0 chr18 3465138 3465216 -82523718 + L2 LINE L2 3127 3215 -57 785 271 143 20 chr18 3465631 3466070 -82522864 - L1ME4a LINE L1 -115 6006 5514 965 241 61 13 chr18 3467128 3467356 -82521578 + MIR SINE MIR 20 258 -4 2300 100 0 0 chr18 3467401 3467701 -82521233 - AluSg SINE Alu -10 300 1 644 284 43 89 chr18 3468310 3468725 -82520209 - L2 LINE L2 -79 3234 2839 603 276 48 31 chr18 3468794 3469084 -82519850 - L1MC4 LINE L1 0 8042 7748 287 256 66 22 chr18 3469114 3469251 -82519683 - L1MC4 LINE L1 -404 7638 7496 589 212 162 0 chr18 3469578 3469757 -82519177 - L1MB7 LINE L1 -16 6168 5961 1759 160 33 0 chr18 3469762 3470057 -82518877 - AluJo SINE Alu 0 304 1 335 286 46 62 chr18 3470070 3470311 -82518623 - L1M4c LINE L1 -4179 2205 1969 2091 109 0 57 chr18 3470338 3470756 -82518178 - AluSx SINE Alu 0 399 1 375 279 29 37 chr18 3470797 3470933 -82518001 - L1M4c LINE L1 -4588 1796 1662 225 180 0 0 chr18 3470953 3471003 -82517931 + T-rich Low_complexity Low_complexity 1 50 0 242 61 0 0 chr18 3471337 3471370 -82517564 - U7 snRNA snRNA -30 33 1 1407 176 111 7 chr18 3471504 3471810 -82517124 - MER7A DNA MER2_type -10 336 1 210 37 0 0 chr18 3471856 3471883 -82517051 + (TG)n Simple_repeat Simple_repeat 2 28 0 1672 129 32 7 chr18 3471883 3472163 -82516771 - AluSx SINE Alu -25 287 1 211 273 20 91 chr18 3472405 3472504 -82516430 + MER5A DNA MER1_type 14 105 -84 21 0 0 0 chr18 3472820 3472841 -82516093 + AT_rich Low_complexity Low_complexity 1 21 0 1608 128 9 4 chr18 3472845 3473072 -82515862 + AluSx SINE Alu 1 228 -84 5284 38 0 4 chr18 3473196 3474168 -82514766 + L1P2 LINE L1 4719 5687 -467 2737 19 0 6 chr18 3474273 3474590 -82514344 - AluYb8 SINE Alu -3 315 1 3506 77 15 0 chr18 3475118 3475583 -82513351 - L1PA8 LINE L1 -4 6168 5697 2211 109 3 0 chr18 3475692 3475985 -82512949 + AluSx SINE Alu 5 298 -14 9331 93 8 5 chr18 3475999 3477316 -82511618 - THE1B-int LTR MaLR -260 1320 1 2099 118 16 48 chr18 3477318 3477692 -82511242 - THE1B LTR MaLR -2 362 1 1269 230 47 22 chr18 3477798 3478159 -82510775 + MLT1A2 LTR MaLR 1 370 -4 4764 220 54 31 chr18 3478167 3479835 -82509099 + L1MEc LINE L1 2152 3817 -2398 2116 69 91 0 chr18 3479835 3480109 -82508825 + AluY SINE Alu 1 299 -12 4764 220 54 31 chr18 3480109 3480144 -82508790 + L1MEc LINE L1 3817 3850 -2365 1241 190 129 8 chr18 3480332 3480595 -82508339 + AluJo SINE Alu 1 295 -7 389 237 98 12 chr18 3480610 3480782 -82508152 + L1M4c LINE L1 615 946 -5700 733 90 10 0 chr18 3480927 3481027 -82507907 - AluS SINE Alu -211 101 1 27 0 0 0 chr18 3481550 3481577 -82507357 + AT_rich Low_complexity Low_complexity 1 27 0 2150 120 0 7 chr18 3481653 3481962 -82506972 + AluSx SINE Alu 6 312 0 27 29 0 0 chr18 3482038 3482072 -82506862 + AT_rich Low_complexity Low_complexity 1 34 0 2833 182 87 84 chr18 3482203 3483640 -82505294 - L1MB3 LINE L1 -239 5944 4515 1605 202 65 16 chr18 3483636 3484082 -82504852 - L1MB3 LINE L1 -1837 4309 3842 * 1005 216 4 52 chr18 3484083 3484333 -82504601 - AluJb SINE Alu -9 303 66 760 165 15 15 chr18 3484378 3484511 -82504423 - FLAM_C SINE Alu 0 133 1 2473 59 3 0 chr18 3484595 3484900 -82504034 - AluY SINE Alu -5 306 1 2034 189 29 35 chr18 3484937 3485449 -82503485 - L1MB4 LINE L1 -6 6174 5666 414 288 37 32 chr18 3485455 3485697 -82503237 - L1MCa LINE L1 -4579 1731 1492 1254 177 8 13 chr18 3485697 3485934 -82503000 + MER46A DNA MER2_type 1 236 0 414 288 37 32 chr18 3485934 3486066 -82502868 - L1MCa LINE L1 -4818 1492 1166 305 290 30 10 chr18 3487030 3487130 -82501804 - L1MCa LINE L1 -4997 1313 1212 302 314 31 0 chr18 3487144 3487335 -82501599 - L1MCa LINE L1 -4974 1145 949 517 209 57 0 chr18 3487637 3487742 -82501192 - MER5A DNA MER1_type -78 111 1 377 254 42 17 chr18 3489897 3490015 -82498919 + L2 LINE L2 3192 3312 -1 339 243 173 54 chr18 3490335 3490520 -82498414 - L1ME4a LINE L1 -223 5898 5692 1186 130 28 47 chr18 3490533 3490748 -82498186 - AluJo SINE Alu -99 213 3 238 290 80 31 chr18 3490754 3490916 -82498018 - L1ME4a LINE L1 -422 5699 5530 244 369 57 33 chr18 3491348 3491470 -82497464 - MIR SINE MIR -113 149 25 242 138 0 35 chr18 3491471 3491529 -82497405 + L1MC4 LINE L1 6648 6703 -1339 333 255 0 0 chr18 3491529 3491627 -82497307 + (TA)n Simple_repeat Simple_repeat 2 99 0 2099 117 0 13 chr18 3491785 3492083 -82496851 - AluSx SINE Alu -14 298 5 3513 77 15 0 chr18 3492192 3492658 -82496276 + L1PA8 LINE L1 5697 6169 -3 2668 10 3 7 chr18 3493184 3493486 -82495448 + AluYb8 SINE Alu 1 301 -17 261 109 0 0 chr18 3493492 3493538 -82495396 + (GAAA)n Simple_repeat Simple_repeat 2 47 0 2070 107 3 46 chr18 3493671 3493997 -82494937 + AluSx SINE Alu 1 312 0 3649 232 93 20 chr18 3493999 3495338 -82493596 - L1M4c LINE L1 -4765 1881 457 244 253 0 46 chr18 3495397 3495484 -82493450 - L1ME1 LINE L1 -38 6128 6046 1748 154 9 63 chr18 3495487 3495636 -82493298 + AluJo SINE Alu 1 126 -186 2271 115 0 0 chr18 3495636 3495941 -82492993 + AluSx SINE Alu 3 307 -5 1748 154 9 63 chr18 3495941 3496110 -82492824 + AluJo SINE Alu 126 302 -10 2012 134 19 7 chr18 3496819 3497126 -82491808 - AluSx SINE Alu -1 311 1 922 255 74 14 chr18 3497800 3498220 -82490714 - L1MCa LINE L1 -3165 2964 2520 638 246 56 11 chr18 3498238 3498522 -82490412 - L1M4 LINE L1 -3712 2434 2138 251 178 0 0 chr18 3498532 3498577 -82490357 - Tigger4(Zombi) DNA MER2_type -2686 45 1 333 354 31 19 chr18 3498595 3498756 -82490178 + L1MEc LINE L1 1589 1751 -4645 1372 240 100 7 chr18 3498902 3499205 -82489729 - L1MCa LINE L1 -3933 2377 2104 405 0 0 0 chr18 3499205 3499250 -82489684 + (TG)n Simple_repeat Simple_repeat 1 45 0 1372 240 100 7 chr18 3499250 3499505 -82489429 - L1MCa LINE L1 -4206 2104 1767 2542 55 3 0 chr18 3499611 3499919 -82489015 - AluY SINE Alu -2 309 1 2026 189 29 35 chr18 3499956 3500468 -82488466 - L1MB4 LINE L1 -6 6174 5666 414 282 37 40 chr18 3500474 3500716 -82488218 - L1MCa LINE L1 -4579 1731 1490 1256 177 9 9 chr18 3500716 3500948 -82487986 + MER46A DNA MER2_type 1 232 -4 414 282 37 40 chr18 3500948 3501085 -82487849 - L1MCa LINE L1 -4820 1490 1166 305 290 30 10 chr18 3502050 3502150 -82486784 - L1MCa LINE L1 -4997 1313 1212 304 314 31 0 chr18 3502164 3502355 -82486579 - L1MCa LINE L1 -4974 1145 949 517 209 57 0 chr18 3502657 3502762 -82486172 - MER5A DNA MER1_type -78 111 1 2303 103 0 10 chr18 3503732 3504042 -82484892 - AluSx SINE Alu -5 307 1 624 230 0 8 chr18 3504103 3504229 -82484705 - FRAM SINE Alu -31 145 21 1611 149 44 37 chr18 3504255 3504550 -82484384 + AluJo SINE Alu 1 297 -15 399 257 59 68 chr18 3504757 3505001 -82483933 - L1ME4a LINE L1 -260 5861 5619 2103 112 0 40 chr18 3505001 3505304 -82483630 - AluSx SINE Alu -21 291 1 399 257 59 68 chr18 3505304 3505413 -82483521 - L1ME4a LINE L1 -502 5619 5511 811 136 8 0 chr18 3506788 3506913 -82482021 + FLAM_C SINE Alu 1 126 -7 242 61 0 0 chr18 3507626 3507659 -82481275 - U7 snRNA snRNA -30 33 1 1506 163 111 7 chr18 3507794 3508100 -82480834 - MER7A DNA MER2_type -10 336 1 1963 105 29 0 chr18 3508139 3508452 -82480482 - AluSx SINE Alu 0 321 1 204 308 15 15 chr18 3509379 3509444 -82479490 - L2 LINE L2 0 3272 3208 355 234 19 61 chr18 3509515 3509673 -82479261 + L2 LINE L2 3106 3313 0 2403 90 0 0 chr18 3509834 3510134 -82478800 - AluSq SINE Alu -13 300 1 1744 156 49 18 chr18 3510780 3511107 -82477827 + MER1B DNA MER1_type 1 337 0 183 328 62 0 chr18 3511134 3511198 -82477736 - L3 LINE CR1 -35 1542 1475 450 289 64 39 chr18 3511266 3511470 -82477464 + MIR SINE MIR 28 236 -26 757 183 0 21 chr18 3513050 3513192 -82475742 - FLAM_C SINE Alu -4 139 1 231 176 44 73 chr18 3513218 3513286 -82475648 - L1 LINE L1 -1178 4968 4903 234 229 42 21 chr18 3513476 3513572 -82475362 - L1 LINE L1 -1479 4667 4570 503 223 169 27 chr18 3513630 3513814 -82475120 + MIR SINE MIR 33 242 -20 1694 188 3 7 chr18 3513853 3514162 -82474772 - AluSx SINE Alu -4 308 1 2198 115 3 3 chr18 3515678 3515982 -82472952 - AluSx SINE Alu -8 304 1 697 204 0 29 chr18 3516695 3516832 -82472102 + FLAM_A SINE Alu 1 133 0 254 240 27 27 chr18 3516845 3516920 -82472014 - L1MC4 LINE L1 -10 8032 7958 564 250 19 32 chr18 3517671 3517827 -82471107 - MER106B DNA MER1_type 0 1059 906 25 0 0 0 chr18 3518447 3518472 -82470462 + AT_rich Low_complexity Low_complexity 1 25 0 844 263 85 14 chr18 3519299 3519580 -82469354 - L2 LINE L2 -1071 2243 1943 21 36 0 0 chr18 3520197 3520225 -82468709 + AT_rich Low_complexity Low_complexity 1 28 0 1817 126 71 44 chr18 3521325 3521690 -82467244 - THE1C LTR MaLR 0 375 1 25 51 0 0 chr18 3522478 3522517 -82466417 + AT_rich Low_complexity Low_complexity 1 39 0 502 244 106 8 chr18 3522789 3522912 -82466022 - MLT1D LTR MaLR -74 431 297 1155 122 0 12 chr18 3522914 3523078 -82465856 + FRAM SINE Alu 1 161 -15 1466 114 0 53 chr18 3523150 3523377 -82465557 - AluSq SINE Alu -18 295 81 513 0 0 0 chr18 3523399 3523456 -82465478 + (TA)n Simple_repeat Simple_repeat 1 57 0 3053 180 86 75 chr18 3523481 3525075 -82463859 - L1MB3 LINE L1 -70 6113 4515 1725 201 65 18 chr18 3525071 3525518 -82463416 - L1MB3 LINE L1 -1837 4309 3842 * 975 174 22 22 chr18 3525519 3525703 -82463231 - AluJo SINE Alu -9 303 120 755 165 15 15 chr18 3525814 3525947 -82462987 - AluJo SINE Alu -169 133 1 260 248 0 0 chr18 3525947 3526015 -82462919 - L1MB3 LINE L1 -2295 3851 3784 2800 10 0 0 chr18 3526025 3526332 -82462602 - AluYa5 SINE Alu -4 307 1 1909 146 146 0 chr18 3526344 3526679 -82462255 + MSTB1 LTR MaLR 46 429 -3 901 151 25 86 chr18 3526679 3526924 -82462010 - L1MB3 LINE L1 -2357 3789 3560 1338 191 17 0 chr18 3526965 3527200 -82461734 - MER8 DNA MER2_type 0 239 1 296 340 133 54 chr18 3527212 3527527 -82461407 + L2 LINE L2 2569 2908 -406 368 248 41 16 chr18 3527587 3527708 -82461226 - MER58B DNA MER1_type 0 341 218 220 295 209 0 chr18 3527732 3527837 -82461097 + L2 LINE L2 3187 3313 0 1491 112 0 5 chr18 3528041 3528238 -82460696 + AluSc SINE Alu 88 283 -26 3864 256 57 58 chr18 3528250 3530129 -82458805 - L1PA15-16 LINE L1 -3222 3627 1748 1224 197 70 35 chr18 3530129 3530413 -82458521 + AluJo SINE Alu 1 294 -18 3864 256 57 58 chr18 3530413 3531896 -82457038 - L1PA15-16 LINE L1 -5101 1748 131 1209 197 126 7 chr18 3531896 3532165 -82456769 - AluJo SINE Alu -1 301 1 3864 256 57 58 chr18 3532165 3532256 -82456678 - L1PA15-16 LINE L1 -6718 131 41 29 47 0 0 chr18 3532348 3532391 -82456543 + AT_rich Low_complexity Low_complexity 1 43 0 2116 134 10 0 chr18 3533098 3533403 -82455531 - AluSx SINE Alu -4 308 1 476 263 77 58 chr18 3533441 3533768 -82455166 - HAL1 LINE L1 -933 1574 1242 270 169 65 0 chr18 3533769 3533846 -82455088 + CT-rich Low_complexity Low_complexity 2 83 0 1939 126 3 27 chr18 3533846 3534147 -82454787 - AluSg SINE Alu -16 294 1 422 184 0 0 chr18 3534147 3534223 -82454711 - AluJ/FRAM SINE Alu -16 296 221 2210 104 3 0 chr18 3534228 3534526 -82454408 - AluSp SINE Alu -14 299 1 769 145 0 72 chr18 3534526 3534678 -82454256 - AluJo SINE Alu -171 141 1 514 223 85 62 chr18 3534678 3535019 -82453915 - HAL1 LINE L1 -1251 1256 908 665 264 9 69 chr18 3535080 3535296 -82453638 - HAL1 LINE L1 -1778 729 527 755 161 0 0 chr18 3535350 3535468 -82453466 - FLAM_C SINE Alu -15 118 1 677 288 107 25 chr18 3535484 3535838 -82453096 - HAL1 LINE L1 -2003 504 122 308 226 71 65 chr18 3536007 3536175 -82452759 - L1MC/D LINE L1 -2011 5797 5629 963 192 58 0 chr18 3536391 3536563 -82452371 - MER5A DNA MER1_type -2 187 6 880 167 130 0 chr18 3536728 3536890 -82452044 + AluJo SINE Alu 1 183 -129 22 56 0 0 chr18 3537311 3537347 -82451587 + AT_rich Low_complexity Low_complexity 1 36 0 1821 265 150 37 chr18 3537533 3538667 -82450267 - HAL1 LINE L1 -1234 1273 12 28 0 0 0 chr18 3539322 3539350 -82449584 + AT_rich Low_complexity Low_complexity 1 28 0 534 224 148 38 chr18 3540377 3540614 -82448320 - L1MD3 LINE L1 -1 7994 7732 26 50 0 0 chr18 3541077 3541117 -82447817 + AT_rich Low_complexity Low_complexity 1 40 0 466 146 73 31 chr18 3541580 3541676 -82447258 + MIR SINE MIR 105 204 -58 732 279 45 37 chr18 3542114 3542358 -82446576 + MIR SINE MIR 6 251 -11 339 42 22 0 chr18 3543445 3543498 -82445436 + MER41A LTR ERV1 391 444 -110 1383 226 3 28 chr18 3544247 3544565 -82444369 - AluJo SINE Alu -2 310 1 2418 88 0 0 chr18 3544713 3545021 -82443913 - AluY SINE Alu -3 308 1 2049 133 3 0 chr18 3546283 3546576 -82442358 + AluSx SINE Alu 3 296 -16 2079 107 3 10 chr18 3549341 3549632 -82439302 + AluSg1 SINE Alu 1 289 -20 6413 188 47 14 chr18 3549636 3551946 -82436988 + L1PA16 LINE L1 3784 6163 -3 1670 164 49 0 chr18 3551991 3552278 -82436656 + AluJo SINE Alu 1 301 -11 220 315 43 0 chr18 3553527 3553619 -82435315 + L2 LINE L2 716 811 -2503 597 246 8 0 chr18 3554357 3554479 -82434455 + FLAM_A SINE Alu 1 123 -10 3335 46 2 2 chr18 3554486 3554903 -82434031 - L1PA7 LINE L1 0 6154 5738 345 167 0 0 chr18 3555606 3555666 -82433268 - L1MC5 LINE L1 -182 7779 7720 630 210 178 93 chr18 3556329 3556672 -82432262 + L2 LINE L2 1593 1964 -1350 1668 176 10 17 chr18 3557236 3557526 -82431408 - AluJo SINE Alu -24 288 1 370 312 234 10 chr18 3557735 3558030 -82430904 - L2 LINE L2 -33 3280 2920 444 265 32 42 chr18 3558728 3558917 -82430017 - L1MC5 LINE L1 -53 7908 7722 1072 108 61 158 chr18 3559009 3559306 -82429628 - L1MA8 LINE L1 -7 6284 6017 226 0 29 29 chr18 3559374 3559409 -82429525 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1865 120 7 28 chr18 3559412 3559695 -82429239 - AluSq SINE Alu -36 277 1 722 197 0 0 chr18 3559744 3559871 -82429063 - AluJb SINE Alu -185 127 1 762 201 0 7 chr18 3560592 3560736 -82428198 + FLAM_C SINE Alu 1 143 0 889 176 100 0 chr18 3561684 3561854 -82427080 - MER2 DNA MER2_type -158 187 1 21 0 0 0 chr18 3562340 3562361 -82426573 + AT_rich Low_complexity Low_complexity 1 21 0 360 64 0 0 chr18 3562895 3562942 -82425992 + (TG)n Simple_repeat Simple_repeat 2 48 0 2266 105 0 3 chr18 3562949 3563253 -82425681 - AluSx SINE Alu -9 303 1 21 0 0 0 chr18 3563380 3563401 -82425533 + AT_rich Low_complexity Low_complexity 1 21 0 1031 194 116 10 chr18 3566329 3566622 -82422312 - MER33 DNA MER1_type 0 324 1 196 321 0 0 chr18 3567436 3567492 -82421442 + MIR SINE MIR 85 140 -68 752 260 220 24 chr18 3567765 3568116 -82420818 - L1ME3 LINE L1 -211 5934 5653 1277 207 57 4 chr18 3568116 3568266 -82420668 - AluJb SINE Alu -7 295 154 180 0 0 0 chr18 3568266 3568286 -82420648 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1277 207 57 4 chr18 3568286 3568415 -82420519 - AluJb SINE Alu -148 154 1 752 260 220 24 chr18 3568415 3568817 -82420117 - L1ME3 LINE L1 -492 5653 5030 2627 206 39 18 chr18 3568819 3569362 -82419572 - MER68 LTR ERV1 0 562 9 506 111 0 0 chr18 3569412 3569484 -82419450 + AluS SINE Alu 1 72 -240 1091 243 89 81 chr18 3569485 3569627 -82419307 - L1ME3 LINE L1 -1755 4374 4235 1317 225 64 0 chr18 3569627 3569894 -82419040 - AluJb SINE Alu -16 286 3 600 165 91 25 chr18 3569898 3570019 -82418915 - FLAM_C SINE Alu -3 130 2 1091 243 89 81 chr18 3570019 3570117 -82418817 - L1ME3 LINE L1 -1896 4233 4137 2428 94 0 0 chr18 3570117 3570426 -82418508 - AluY SINE Alu -2 309 1 1091 243 89 81 chr18 3570426 3571149 -82417785 - L1ME3 LINE L1 -1992 4137 3398 1089 115 7 0 chr18 3571163 3571311 -82417623 - AluSg/x SINE Alu -20 290 142 22 56 0 0 chr18 3571327 3571363 -82417571 + AT_rich Low_complexity Low_complexity 1 36 0 528 237 45 103 chr18 3571552 3571767 -82417167 - L1ME3 LINE L1 -3005 3124 2929 1596 199 7 13 chr18 3571767 3572068 -82416866 - AluJo SINE Alu -9 303 5 528 237 45 103 chr18 3572068 3572143 -82416791 - L1ME3 LINE L1 -3200 2929 2851 591 214 237 46 chr18 3572160 3572552 -82416382 - L1ME3 LINE L1 -3361 2768 2302 210 37 0 0 chr18 3572605 3572632 -82416302 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 484 246 144 16 chr18 3573104 3573291 -82415643 - L1ME3 LINE L1 -4639 1671 1461 227 131 82 33 chr18 3573380 3573441 -82415493 - L1ME3 LINE L1 -4836 1293 1230 255 219 62 10 chr18 3573474 3573570 -82415364 - L1ME3 LINE L1 -5051 1068 968 2304 111 0 0 chr18 3574134 3574440 -82414494 - AluSx SINE Alu -6 306 1 310 295 86 14 chr18 3574484 3574601 -82414333 - MIR SINE MIR -93 115 11 2204 150 0 3 chr18 3575642 3575988 -82412946 + L1PA16 LINE L1 5804 6148 -18 2209 104 0 3 chr18 3576105 3576402 -82412532 + AluSx SINE Alu 1 296 -16 1541 157 51 31 chr18 3577063 3577357 -82411577 - AluJo SINE Alu -12 300 1 383 249 145 65 chr18 3579002 3579112 -82409822 - L1MC/D LINE L1 -325 5796 5696 1513 155 132 3 chr18 3579112 3579415 -82409519 - MER2 DNA MER2_type -1 343 2 383 249 145 65 chr18 3579415 3579620 -82409314 - L1MC/D LINE L1 -425 5696 5455 492 266 69 69 chr18 3580035 3580310 -82408624 + MER102b DNA MER1_type 20 294 -47 2165 95 7 0 chr18 3580566 3580860 -82408074 - AluY SINE Alu -15 296 1 327 235 71 20 chr18 3581044 3581142 -82407792 - MER5A DNA MER1_type -50 139 37 284 264 100 27 chr18 3581057 3581167 -82407767 + MER5A DNA MER1_type 72 189 0 * 1853 171 10 3 chr18 3581546 3581838 -82407096 + AluJb SINE Alu 2 295 -17 1820 136 68 39 chr18 3582215 3582357 -82406577 - MER7A DNA MER2_type -2692 346 210 2174 120 3 3 chr18 3582357 3582666 -82406268 - AluSx SINE Alu -2 310 2 1820 136 68 39 chr18 3582666 3582861 -82406073 - MER7A DNA MER2_type -2828 210 1 490 271 76 51 chr18 3582918 3583259 -82405675 + L1MC/D LINE L1 5271 5614 -552 228 161 25 34 chr18 3583375 3583493 -82405441 + (TATAG)n Simple_repeat Simple_repeat 2 118 0 21 0 0 0 chr18 3584727 3584748 -82404186 + AT_rich Low_complexity Low_complexity 1 21 0 2132 114 16 3 chr18 3585393 3585699 -82403235 - AluSx SINE Alu -2 310 1 725 194 58 0 chr18 3587434 3587573 -82401361 - AluJb SINE Alu -30 282 136 437 227 0 11 chr18 3587579 3587667 -82401267 - MIR SINE MIR -151 111 25 391 331 89 6 chr18 3587675 3587844 -82401090 - MIR SINE MIR -55 207 25 2236 108 0 3 chr18 3588419 3588715 -82400219 + AluSx SINE Alu 3 297 -15 1526 189 10 7 chr18 3589186 3589488 -82399446 - AluJb SINE Alu -9 303 1 516 148 0 0 chr18 3589659 3589740 -82399194 + U13 snRNA snRNA 23 103 -1 940 100 29 0 chr18 3589848 3589988 -82398946 - AluJb SINE Alu 0 312 169 1349 184 78 24 chr18 3590993 3591286 -82397648 - AluJo SINE Alu -3 309 1 919 188 24 0 chr18 3591677 3591842 -82397092 - FAM SINE Alu -3 172 4 1579 138 155 77 chr18 3593306 3593720 -82395214 - MLT1B LTR MaLR 0 467 22 612 122 17 52 chr18 3593718 3593833 -82395101 + HY1 scRNA scRNA 1 111 -1 * 859 186 41 41 chr18 3594448 3594620 -82394314 + FAM SINE Alu 1 172 -3 247 258 16 32 chr18 3594625 3594687 -82394247 - MIR SINE MIR -93 115 55 2254 111 3 3 chr18 3594738 3595045 -82393889 + AluSx SINE Alu 3 309 -3 191 313 31 83 chr18 3595370 3595408 -82393526 - L2 LINE L2 -9 3263 3225 490 268 62 62 chr18 3595408 3595617 -82393317 + MER63A DNA MER1_type 1 209 -1 191 313 31 83 chr18 3595617 3595674 -82393260 - L2 LINE L2 -47 3225 3173 236 324 56 96 chr18 3595869 3596246 -82392688 + L1MEd LINE L1 270 631 -5488 490 274 76 34 chr18 3596432 3596760 -82392174 + L1MEd LINE L1 868 1209 -4910 1816 175 0 16 chr18 3597237 3597552 -82391382 + AluJo SINE Alu 1 310 -2 317 240 209 31 chr18 3597891 3598116 -82390818 - L1ME LINE L1 -305 5816 5552 2013 114 24 3 chr18 3598354 3598644 -82390290 - AluSg SINE Alu -9 301 6 752 189 0 0 chr18 3599609 3599736 -82389198 + FLAM_A SINE Alu 11 137 -5 386 76 45 0 chr18 3600068 3600134 -82388800 - L1MB2 LINE L1 0 6171 6103 2263 98 13 13 chr18 3600137 3600443 -82388491 + AluY SINE Alu 3 308 -3 24 0 0 0 chr18 3600543 3600567 -82388367 + GC_rich Low_complexity Low_complexity 1 24 0 225 0 0 0 chr18 3600584 3600609 -82388325 + (A)n Simple_repeat Simple_repeat 1 25 0 1471 171 75 16 chr18 3600610 3600932 -82388002 - L1MB2 LINE L1 -63 6108 5768 1633 155 99 0 chr18 3600944 3601228 -82387706 - AluSx SINE Alu 0 312 1 997 235 146 50 chr18 3601239 3601348 -82387586 - L1ME3A LINE L1 -9 6161 6064 2126 133 0 0 chr18 3601348 3601648 -82387286 + AluSq SINE Alu 1 300 -13 997 235 146 50 chr18 3601648 3601919 -82387015 - L1ME3A LINE L1 -106 6064 5737 1931 133 85 39 chr18 3601919 3602332 -82386602 - MSTB1 LTR MaLR 0 432 1 997 235 146 50 chr18 3602332 3602354 -82386580 - L1ME3A LINE L1 -433 5737 5719 259 296 0 0 chr18 3603299 3603353 -82385581 - MIR SINE MIR -62 146 93 264 145 0 65 chr18 3603456 3603518 -82385416 + L1ME4a LINE L1 6061 6118 -3 1828 134 29 0 chr18 3603542 3603841 -82385093 - AluSx SINE Alu 0 307 1 1529 165 6 72 chr18 3603952 3604286 -82384648 - AluJo SINE Alu 0 312 1 353 197 15 0 chr18 3604500 3604565 -82384369 + Tigger5 DNA MER2_type 13 78 -2245 385 250 0 0 chr18 3604565 3604641 -82384293 - Tigger5 DNA MER2_type -3 2320 2245 * 518 155 0 24 chr18 3604634 3604718 -82384216 + Tigger5 DNA MER2_type 2242 2323 0 2251 85 3 3 chr18 3604846 3605140 -82383794 + AluSg SINE Alu 1 294 -16 1248 158 77 0 chr18 3605188 3605422 -82383512 + MER44D DNA MER2_type 5 526 -83 2170 119 0 3 chr18 3605422 3605716 -82383218 + AluSx SINE Alu 1 293 -19 480 207 167 20 chr18 3605725 3605875 -82383059 + L1MA4 LINE L1 6129 6300 0 383 320 75 18 chr18 3605877 3606105 -82382829 + L1 LINE L1 4165 4405 -1741 1299 276 51 36 chr18 3606187 3606252 -82382682 + L1MEc LINE L1 35 98 -6298 1198 160 176 4 chr18 3606252 3606502 -82382432 + AluJo SINE Alu 1 293 -9 1299 276 51 36 chr18 3606502 3606910 -82382024 + L1MEc LINE L1 98 515 -5881 1686 158 73 21 chr18 3607113 3607442 -82381492 + MER7A DNA MER2_type 3 346 0 496 139 0 47 chr18 3607443 3607529 -82381405 + MER44D DNA MER2_type 524 605 0 275 194 43 151 chr18 3607797 3607936 -82380998 - L1MC5 LINE L1 -76 7885 7762 2396 60 27 7 chr18 3608326 3608625 -82380309 + AluY SINE Alu 1 305 -6 386 171 0 40 chr18 3609015 3609091 -82379843 - MER58 DNA MER1_type -30 2390 2318 1217 142 26 177 chr18 3609130 3609469 -82379465 + AluJb SINE Alu 14 301 -11 347 261 110 45 chr18 3609639 3609884 -82379050 - L1ME4a LINE L1 -22 6099 5839 2147 94 19 19 chr18 3609995 3610303 -82378631 - AluY SINE Alu -3 308 1 1874 166 0 7 chr18 3611532 3611827 -82377107 - AluSx SINE Alu -19 293 1 30 27 0 0 chr18 3611884 3611921 -82377013 + AT_rich Low_complexity Low_complexity 1 37 0 219 208 192 77 chr18 3612442 3612572 -82376362 - L2 LINE L2 -3 3310 3166 2149 102 28 0 chr18 3612595 3612879 -82376055 + AluSq SINE Alu 10 301 -12 317 317 85 40 chr18 3612935 3613159 -82375775 - L2 LINE L2 -273 3040 2807 349 229 111 33 chr18 3613554 3613707 -82375227 + L1MC5 LINE L1 7736 7900 -61 1321 151 81 21 chr18 3614041 3614325 -82374609 - MER33 DNA MER1_type -23 301 1 288 184 0 115 chr18 3614455 3614542 -82374392 - HAL1 LINE L1 -360 2147 2071 294 254 140 46 chr18 3614741 3614974 -82373960 - HAL1 LINE L1 -617 1890 1590 842 143 0 36 chr18 3615439 3615579 -82373355 - AluJo SINE Alu -177 135 1 304 306 89 50 chr18 3615712 3615892 -82373042 + HAL1 LINE L1 791 977 -1530 332 298 301 23 chr18 3615927 3616236 -82372698 + HAL1 LINE L1 1069 1463 -1044 204 224 40 13 chr18 3616572 3616648 -82372286 + (TATATG)n Simple_repeat Simple_repeat 6 83 0 449 217 147 6 chr18 3616668 3616825 -82372109 - MER104 DNA MER2_type 0 180 2 273 29 0 0 chr18 3618140 3618174 -82370760 + (TA)n Simple_repeat Simple_repeat 1 34 0 1280 147 4 89 chr18 3618738 3618996 -82369938 - MER46A DNA MER2_type 0 236 1 657 238 0 8 chr18 3619247 3619373 -82369561 - FLAM_A SINE Alu -4 129 5 1011 266 96 17 chr18 3620302 3620655 -82368279 + L1M4b LINE L1 69 449 -6410 903 267 75 29 chr18 3620675 3620956 -82367978 + L1M4b LINE L1 489 782 -6077 1006 125 7 0 chr18 3620966 3621118 -82367816 - LTR43 LTR ERV1 -60 542 390 1590 186 177 29 chr18 3621121 3621606 -82367328 + L1M4b LINE L1 1038 1594 -5265 1205 103 41 8 chr18 3621606 3621851 -82367083 + L1PA16 LINE L1 5870 6157 -9 1650 243 96 46 chr18 3621865 3622603 -82366331 + L1M4b LINE L1 1561 2335 -4624 2526 45 0 0 chr18 3622605 3622892 -82366042 + AluY SINE Alu 1 287 -24 2168 103 23 3 chr18 3623622 3623922 -82365012 + AluSx SINE Alu 1 306 -6 1990 147 18 52 chr18 3623991 3624328 -82364606 + L1MB3 LINE L1 5813 6137 -46 2233 123 0 0 chr18 3624328 3624630 -82364304 + AluSx SINE Alu 1 302 -10 1990 147 18 52 chr18 3624630 3624674 -82364260 + L1MB3 LINE L1 6137 6181 -2 311 286 126 33 chr18 3625365 3625547 -82363387 + L1M4b LINE L1 2469 2667 -4471 2238 120 19 45 chr18 3625756 3626130 -82362804 - THE1B LTR MaLR 0 364 1 12426 90 7 18 chr18 3626130 3626395 -82362539 - THE1B-int LTR MaLR 0 1580 1314 1350 179 10 30 chr18 3626395 3626697 -82362237 + AluSg SINE Alu 1 296 -14 12426 90 7 18 chr18 3626697 3628028 -82360906 - THE1B-int LTR MaLR -266 1314 1 2229 123 16 48 chr18 3628030 3628404 -82360530 - THE1B LTR MaLR -2 362 1 1425 230 47 22 chr18 3628510 3628871 -82360063 + MLT1A2 LTR MaLR 1 370 -4 5477 217 55 31 chr18 3628879 3630547 -82358387 + L1M4b LINE L1 2894 4560 -2397 2126 69 91 0 chr18 3630547 3630821 -82358113 + AluY SINE Alu 1 299 -12 5477 217 55 31 chr18 3630821 3630855 -82358079 + L1M4b LINE L1 4560 4592 -2365 1396 183 129 8 chr18 3631043 3631306 -82357628 + AluJo SINE Alu 1 295 -7 3506 201 153 38 chr18 3631321 3631653 -82357281 + L1M3 LINE L1 615 908 -5738 303 93 0 0 chr18 3631653 3631696 -82357238 + (CA)n Simple_repeat Simple_repeat 2 44 0 3506 201 153 38 chr18 3631696 3631888 -82357046 + L1M3 LINE L1 908 1077 -5569 2541 50 0 10 chr18 3631888 3632187 -82356747 + AluY SINE Alu 1 296 -15 3506 201 153 38 chr18 3632187 3633070 -82355864 + L1M3 LINE L1 1077 2289 -4357 1846 132 40 0 chr18 3633070 3633380 -82355554 + AluSx SINE Alu 2 322 0 3506 201 153 38 chr18 3633380 3633502 -82355432 + L1M3 LINE L1 2289 2396 -4250 2320 72 17 0 chr18 3633584 3633876 -82355058 + AluY SINE Alu 1 297 -14 3199 221 97 39 chr18 3633967 3634772 -82354162 + MER21B LTR ERV1 12 863 0 5535 205 36 51 chr18 3634783 3635088 -82353846 + L1M3 LINE L1 2400 2708 -3964 1819 138 7 37 chr18 3635088 3635384 -82353550 + AluJb SINE Alu 6 292 -20 1561 198 0 0 chr18 3635385 3635672 -82353262 + AluJb SINE Alu 26 312 0 5535 205 36 51 chr18 3635672 3636647 -82352287 + L1M3 LINE L1 2708 3696 -2976 1867 111 85 0 chr18 3636647 3636918 -82352016 - AluSx SINE Alu -18 294 1 5535 205 36 51 chr18 3636918 3637585 -82351349 + L1M3 LINE L1 3696 5995 -677 387 227 23 23 chr18 3637586 3637674 -82351260 + Tigger5 DNA MER2_type 1 88 -2235 505 135 0 115 chr18 3637693 3637715 -82351219 + Tigger5 DNA MER2_type 2232 2255 -68 2053 129 0 17 chr18 3637715 3638017 -82350917 + AluJb SINE Alu 1 297 -15 505 135 0 115 chr18 3638017 3638098 -82350836 + Tigger5 DNA MER2_type 2255 2323 0 763 207 112 11 chr18 3638100 3638279 -82350655 + L1M3 LINE L1 5997 6193 -485 1490 218 3 55 chr18 3638282 3638630 -82350304 - MLT2B3 LTR ERVL -2 552 223 271 141 31 0 chr18 3638630 3638694 -82350240 + GA-rich Low_complexity Low_complexity 2 67 0 3634 150 30 7 chr18 3638750 3639780 -82349154 - ERVL LTR ERVL -495 5269 4165 1538 181 0 15 chr18 3639833 3640103 -82348831 + AluJb SINE Alu 1 266 -46 337 109 0 0 chr18 3640119 3640174 -82348760 + AluSp/q SINE Alu 249 303 0 242 237 79 0 chr18 3640175 3640251 -82348683 + L1M LINE L1 5325 5406 -764 266 204 0 0 chr18 3640290 3640344 -82348590 + L1 LINE L1 4292 4345 -1801 28 48 0 0 chr18 3640386 3640428 -82348506 + AT_rich Low_complexity Low_complexity 1 42 0 478 194 0 10 chr18 3640513 3640616 -82348318 + L1 LINE L1 3363 3464 -2682 259 204 0 0 chr18 3640617 3640661 -82348273 - MLT1A1 LTR MaLR 0 374 331 552 157 75 0 chr18 3640677 3640836 -82348098 + CT-rich Low_complexity Low_complexity 3 173 0 1886 162 13 3 chr18 3640860 3641169 -82347765 - AluJb SINE Alu 0 312 1 709 224 70 19 chr18 3641172 3641386 -82347548 - MLT1A1 LTR MaLR -64 301 77 751 242 23 65 chr18 3641387 3641581 -82347353 - L1ME3A LINE L1 -217 5953 5771 2187 130 0 0 chr18 3641581 3641889 -82347045 - AluSx SINE Alu -4 308 1 751 242 23 65 chr18 3641889 3641954 -82346980 - L1ME3A LINE L1 -399 5771 5705 1427 139 0 19 chr18 3641958 3642173 -82346761 - AluJo SINE Alu -16 296 86 913 234 34 86 chr18 3642176 3642332 -82346602 - L1ME3A LINE L1 -463 5699 5536 2629 158 24 5 chr18 3642332 3642755 -82346179 - MSTB1 LTR MaLR 0 432 2 913 234 34 86 chr18 3642755 3643038 -82345896 - L1ME3A LINE L1 -626 5536 5283 1915 95 47 0 chr18 3643547 3643800 -82345134 - AluSx SINE Alu -15 297 33 264 310 35 0 chr18 3644592 3644679 -82344255 - L2 LINE L2 -2 3311 3222 2122 134 3 0 chr18 3644727 3645025 -82343909 + AluSx SINE Alu 1 299 -13 667 203 0 30 chr18 3645034 3645167 -82343767 + AluJo SINE Alu 5 133 -169 502 294 25 0 chr18 3645178 3645341 -82343593 + L1ME3A LINE L1 5956 6122 -48 433 228 34 40 chr18 3645359 3645508 -82343426 - L1ME LINE L1 -465 5697 5550 788 78 0 0 chr18 3645513 3645615 -82343319 - MSTB1 LTR MaLR 0 432 331 629 191 9 0 chr18 3645615 3645720 -82343214 + FRAM SINE Alu 41 146 -30 2417 72 0 10 chr18 3645720 3646027 -82342907 - AluY SINE Alu -7 304 1 1000 163 0 7 chr18 3646537 3646690 -82342244 + AluJo SINE Alu 137 288 -24 318 143 89 0 chr18 3646761 3646817 -82342117 - AluSc SINE Alu -123 176 116 1620 129 0 4 chr18 3646818 3647051 -82341883 - AluSg SINE Alu -17 293 62 2189 99 0 7 chr18 3647105 3647397 -82341537 + AluSc SINE Alu 1 290 -19 342 289 7 63 chr18 3647881 3648023 -82340911 + MER94 DNA DNA 1 134 0 225 94 0 0 chr18 3648089 3648121 -82340813 + (T)n Simple_repeat Simple_repeat 1 32 0 1595 120 0 5 chr18 3648128 3648345 -82340589 - AluSx SINE Alu -96 216 1 2330 101 0 0 chr18 3648889 3649187 -82339747 - AluSx SINE Alu -14 298 1 1215 247 40 4 chr18 3649301 3649576 -82339358 - MER82 DNA MER2_type -1 652 368 1831 91 14 39 chr18 3649581 3649867 -82339067 + MER50 LTR ERV1 12 290 -444 341 130 0 0 chr18 3649867 3649921 -82339013 - MLT2A2 LTR ERVL 0 453 400 236 174 0 0 chr18 3649929 3649975 -82338959 - L1MC4 LINE L1 -1375 6667 6622 2753 75 23 29 chr18 3649975 3650262 -82338672 - MLT2A1 LTR ERVL -61 383 97 2402 58 7 3 chr18 3650262 3650556 -82338378 + AluY SINE Alu 1 295 -16 2753 75 23 29 chr18 3650556 3650653 -82338281 - MLT2A1 LTR ERVL -347 97 1 46899 59 5 0 chr18 3650653 3656278 -82332656 - HERVL-A1-A1 LTR ERVL 0 5654 1 3264 65 69 7 chr18 3656278 3656696 -82332238 - MLT2A1 LTR ERVL 0 444 1 2452 119 66 29 chr18 3656696 3656981 -82331953 + MER50 LTR ERV1 286 592 -142 2351 103 0 0 chr18 3656981 3657292 -82331642 - AluSx SINE Alu 0 312 2 2452 119 66 29 chr18 3657292 3657417 -82331517 + MER50 LTR ERV1 592 711 -23 2020 189 3 31 chr18 3657407 3657798 -82331136 - MER82 DNA MER2_type -272 381 2 * 1734 141 48 4 chr18 3658482 3658751 -82330183 - AluSx SINE Alu -18 294 14 377 296 111 17 chr18 3658976 3659148 -82329786 - MIR SINE MIR -23 239 52 1998 148 3 0 chr18 3659738 3660036 -82328898 + AluJb SINE Alu 6 304 -8 1635 137 8 15 chr18 3660362 3660624 -82328310 + AluJb SINE Alu 46 305 -7 1439 165 4 29 chr18 3661357 3661599 -82327335 + AluJo SINE Alu 1 236 -76 1035 167 0 6 chr18 3661624 3661792 -82327142 + FRAM SINE Alu 1 40 0 1781 188 0 3 chr18 3661805 3662114 -82326820 + AluJb SINE Alu 1 308 -4 277 306 16 66 chr18 3662276 3662397 -82326537 + L2 LINE L2 3155 3269 -3 2200 96 0 35 chr18 3663021 3663334 -82325600 - AluSp SINE Alu -11 302 1 21 82 0 0 chr18 3664736 3664785 -82324149 + GC_rich Low_complexity Low_complexity 1 49 0 30 27 0 0 chr18 3665540 3665577 -82323357 + GC_rich Low_complexity Low_complexity 1 37 0 1807 145 6 46 chr18 3667511 3667836 -82321098 - AluSx SINE Alu 0 312 1 1170 171 4 22 chr18 3667994 3668222 -82320712 - AluJo SINE Alu -4 308 85 1861 145 11 0 chr18 3668752 3669035 -82319899 + AluJo SINE Alu 1 286 -26 425 306 44 31 chr18 3669388 3669548 -82319386 - MIR SINE MIR -16 246 85 2166 105 0 0 chr18 3670120 3670415 -82318519 - AluSx SINE Alu -17 295 1 187 261 0 0 chr18 3671230 3671276 -82317658 - MIR SINE MIR -171 91 46 1654 167 41 3 chr18 3672107 3672400 -82316534 + AluJo SINE Alu 1 304 -8 313 333 8 0 chr18 3673267 3673390 -82315544 + MIR SINE MIR 29 152 -56 884 135 0 8 chr18 3673690 3673823 -82315111 + FLAM_A SINE Alu 1 132 -1 6334 146 5 7 chr18 3675761 3676119 -82312815 - L1PB1 LINE L1 0 6151 5794 675 94 0 0 chr18 3676119 3676215 -82312719 + (TA)n Simple_repeat Simple_repeat 2 97 0 2098 104 13 7 chr18 3676224 3676532 -82312402 - AluSx SINE Alu -2 310 1 6334 146 5 7 chr18 3676532 3677862 -82311072 - L1PB1 LINE L1 -365 5786 4457 * 43961 43 9 1 chr18 3677833 3683939 -82304995 - L1PA4 LINE L1 -1 6154 1 4676 180 5 19 chr18 3683937 3684882 -82304052 - L1PB1 LINE L1 -1654 4492 3561 * 27 0 0 0 chr18 3684882 3684909 -82304025 + AT_rich Low_complexity Low_complexity 1 27 0 234 0 0 0 chr18 3684942 3684968 -82303966 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 10160 38 3 78 chr18 3684968 3686387 -82302547 - SVA Other Other -23 1363 51 207 0 0 0 chr18 3686387 3686410 -82302524 + (GGGAGA)n Simple_repeat Simple_repeat 2 24 0 345 138 0 31 chr18 3686411 3686476 -82302458 - L1PB1 LINE L1 -2573 3573 3511 1051 227 81 32 chr18 3686892 3687200 -82301734 - L1ME2 LINE L1 -8 6156 5828 813 165 0 8 chr18 3687200 3687327 -82301607 - FLAM_A SINE Alu -7 126 1 1051 227 81 32 chr18 3687327 3687362 -82301572 - L1ME2 LINE L1 -336 5828 5796 372 22 0 0 chr18 3687364 3687409 -82301525 + (TG)n Simple_repeat Simple_repeat 2 46 0 1828 144 24 0 chr18 3687560 3687858 -82301076 + AluJb SINE Alu 6 310 -2 895 208 15 58 chr18 3688376 3688755 -82300179 - MLT1B LTR MaLR -99 368 1 804 121 0 8 chr18 3688847 3688971 -82299963 - FLAM_C SINE Alu -19 124 2 703 153 0 0 chr18 3690004 3690115 -82298819 - FLAM_C SINE Alu -30 113 3 2077 125 3 0 chr18 3690724 3691020 -82297914 + AluSx SINE Alu 1 297 -15 2456 43 0 10 chr18 3691021 3691346 -82297588 + AluY SINE Alu 1 311 0 797 191 0 0 chr18 3691818 3691949 -82296985 - FLAM_A SINE Alu -2 131 1 2372 63 0 7 chr18 3693574 3693875 -82295059 - AluSc SINE Alu -10 299 1 2432 39 0 0 chr18 3694081 3694366 -82294568 + AluY SINE Alu 3 287 -24 181 279 139 13 chr18 3694696 3694775 -82294159 - L3b LINE CR1 0 1583 1495 2117 96 20 3 chr18 3695096 3695397 -82293537 + AluSx SINE Alu 1 306 -6 1880 148 18 52 chr18 3695466 3695803 -82293131 + L1MB3 LINE L1 5813 6137 -46 2130 123 0 0 chr18 3695803 3696105 -82292829 + AluSx SINE Alu 1 302 -10 1880 148 18 52 chr18 3696105 3696151 -82292783 + L1MB3 LINE L1 6137 6183 0 491 225 125 38 chr18 3696812 3696972 -82291962 + MER3 DNA MER1_type 1 127 -82 2031 92 0 7 chr18 3696973 3697254 -82291680 + AluSx SINE Alu 2 280 -32 1534 172 17 10 chr18 3697312 3697602 -82291332 - AluJo SINE Alu -20 292 1 283 319 101 8 chr18 3697624 3697743 -82291191 - L2 LINE L2 -64 3249 3120 284 291 150 16 chr18 3698441 3698568 -82290366 + MER5B DNA MER1_type 7 150 -28 437 231 46 9 chr18 3699656 3699764 -82289170 + MIR SINE MIR 46 157 -105 625 237 30 7 chr18 3699910 3700045 -82288889 + MER5B DNA MER1_type 41 178 0 1344 175 57 24 chr18 3700066 3700195 -82288739 + AluJo SINE Alu 1 124 -188 2122 104 3 7 chr18 3700195 3700492 -82288442 + AluSq SINE Alu 1 296 -17 1344 175 57 24 chr18 3700492 3700659 -82288275 + AluJo SINE Alu 124 307 -5 2446 55 0 3 chr18 3701543 3701851 -82287083 - AluY SINE Alu -4 307 1 1909 125 28 0 chr18 3701853 3702141 -82286793 - AluSx SINE Alu -16 296 1 2267 85 3 0 chr18 3703108 3703413 -82285521 - AluSx SINE Alu -6 306 1 230 286 26 0 chr18 3703630 3703707 -82285227 - L1ME4a LINE L1 -91 6030 5952 478 197 58 51 chr18 3703725 3703862 -82285072 - L2 LINE L2 0 3313 3176 2322 236 173 21 chr18 3703976 3704867 -82284067 - HAL1 LINE L1 -30 2477 1452 2407 165 33 24 chr18 3704933 3705357 -82283577 + MSTB1 LTR MaLR 1 428 -4 815 267 123 19 chr18 3705389 3705405 -82283529 - L1ME4a LINE L1 -209 5912 5899 817 213 26 0 chr18 3705405 3705560 -82283374 - FRAM SINE Alu -7 159 1 815 267 123 19 chr18 3705560 3705917 -82283017 - L1ME4a LINE L1 -222 5899 5500 2417 63 0 0 chr18 3706029 3706329 -82282605 + AluY SINE Alu 1 300 -11 348 176 0 0 chr18 3706684 3706752 -82282182 + T-rich Low_complexity Low_complexity 1 68 0 21 0 0 0 chr18 3706966 3706987 -82281947 + AT_rich Low_complexity Low_complexity 1 21 0 2141 118 0 0 chr18 3707113 3707426 -82281508 + AluSq SINE Alu 1 313 0 333 323 47 16 chr18 3707435 3707689 -82281245 + L1M4 LINE L1 5067 5328 -818 936 147 13 0 chr18 3707692 3707848 -82281086 + AluJb SINE Alu 134 291 -21 2081 101 3 16 chr18 3707851 3708157 -82280777 + AluSq SINE Alu 1 302 -11 255 61 0 0 chr18 3708312 3708345 -82280589 + (T)n Simple_repeat Simple_repeat 1 33 0 2092 132 0 0 chr18 3708351 3708661 -82280273 - AluSx SINE Alu 0 312 3 707 155 47 16 chr18 3708913 3709042 -82279892 - FLAM_A SINE Alu 0 142 10 431 326 30 8 chr18 3709517 3709649 -82279285 - MIR SINE MIR -123 139 5 343 316 60 0 chr18 3711877 3711994 -82276940 + MER5C DNA MER1_type 1 124 -200 1938 147 0 0 chr18 3711994 3712294 -82276640 + AluSx SINE Alu 1 300 -12 316 197 70 0 chr18 3712322 3712393 -82276541 + MER5C DNA MER1_type 235 310 -14 207 220 20 20 chr18 3712685 3712735 -82276199 + MIR SINE MIR 206 255 -7 188 0 74 0 chr18 3712735 3712762 -82276172 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 238 321 17 14 chr18 3713018 3713118 -82275816 - MIR SINE MIR -97 111 10 271 256 131 80 chr18 3714109 3714246 -82274688 - L2 LINE L2 -10 3262 3119 182 293 242 19 chr18 3714269 3714484 -82274450 - L2 LINE L2 0 3272 3010 804 252 60 43 chr18 3714625 3715030 -82273904 - MLT1H1 LTR MaLR 0 549 139 230 133 40 13 chr18 3715349 3715410 -82273524 + (TA)n Simple_repeat Simple_repeat 1 66 -11 2278 107 3 0 chr18 3715410 3715700 -82273234 - AluSq SINE Alu -22 291 1 230 133 40 13 chr18 3715700 3715713 -82273221 + (TA)n Simple_repeat Simple_repeat 66 77 0 1429 151 6 119 chr18 3715713 3716032 -82272902 - AluJb SINE Alu -27 285 3 951 122 0 0 chr18 3716081 3716212 -82272722 + FLAM_C SINE Alu 3 133 -10 496 313 113 13 chr18 3716225 3716455 -82272479 - L2 LINE L2 -340 2974 2722 1942 152 14 10 chr18 3716808 3717104 -82271830 + AluJo SINE Alu 1 297 -15 242 146 0 0 chr18 3718680 3718721 -82270213 - L1M4 LINE L1 -1478 4668 4628 2359 94 7 0 chr18 3718721 3719028 -82269906 - AluSx SINE Alu -3 309 1 1798 186 3 3 chr18 3719405 3719712 -82269222 - AluJo SINE Alu -5 307 1 340 319 116 36 chr18 3721479 3721808 -82267126 - L2 LINE L2 -1 3271 2917 200 288 144 22 chr18 3721839 3721978 -82266956 - L2 LINE L2 -473 2841 2686 467 253 137 33 chr18 3722588 3722770 -82266164 - HAL1 LINE L1 -36 2471 2271 2165 259 95 40 chr18 3722972 3724052 -82264882 - HAL1 LINE L1 -562 1945 806 274 294 124 20 chr18 3724086 3724239 -82264695 - HAL1 LINE L1 -1846 661 493 720 234 85 5 chr18 3724282 3724470 -82264464 + MER105 DNA DNA 1 203 -1 1535 158 56 0 chr18 3724579 3724863 -82264071 - L1MA3 LINE L1 0 6305 6006 1659 101 4 76 chr18 3724871 3725148 -82263786 - AluSx SINE Alu -55 257 1 23 78 0 0 chr18 3725782 3725833 -82263101 + GC_rich Low_complexity Low_complexity 1 51 0 292 294 92 0 chr18 3726685 3726794 -82262140 + MIR SINE MIR 66 184 -78 255 295 196 0 chr18 3726915 3727027 -82261907 - MIR SINE MIR -10 252 119 275 223 0 10 chr18 3727475 3727578 -82261356 + (TCCA)n Simple_repeat Simple_repeat 1 102 0 416 331 0 0 chr18 3727618 3727772 -82261162 + (TCCA)n Simple_repeat Simple_repeat 4 157 0 2842 170 115 18 chr18 3730246 3730874 -82258060 - MER50 LTR ERV1 -32 702 14 2198 107 10 10 chr18 3731258 3731566 -82257368 - AluSx SINE Alu -4 308 1 2170 91 10 20 chr18 3734749 3735047 -82253887 - AluSx SINE Alu -17 295 1 2083 131 20 7 chr18 3741504 3741801 -82247133 - AluSx SINE Alu -11 301 1 2397 103 3 0 chr18 3742363 3742673 -82246261 + AluSq SINE Alu 1 311 -2 243 0 0 0 chr18 3742883 3742910 -82246024 + (A)n Simple_repeat Simple_repeat 1 27 0 1535 158 114 11 chr18 3745184 3745456 -82243478 + AluJo SINE Alu 1 300 -2 639 184 176 0 chr18 3745459 3745595 -82243339 + AluJo/FRAM SINE Alu 137 296 -6 368 239 289 20 chr18 3746859 3747056 -82241878 + MIR SINE MIR 1 250 -12 208 231 19 0 chr18 3748162 3748214 -82240720 + GA-rich Low_complexity Low_complexity 4 56 0 202 130 65 0 chr18 3748905 3748951 -82239983 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 2018 152 0 13 chr18 3749084 3749394 -82239540 + AluSx SINE Alu 1 306 -6 440 236 183 58 chr18 3752070 3752447 -82236487 + MLT1J2 LTR MaLR 21 448 -2 385 279 29 7 chr18 3754275 3754442 -82234492 + L1MC4a LINE L1 7175 7313 -495 879 226 143 0 chr18 3754523 3754802 -82234132 + MER33 DNA MER1_type 1 319 -5 307 297 178 30 chr18 3754976 3755245 -82233689 + L1MC4 LINE L1 7604 7912 -130 620 189 0 9 chr18 3755908 3756014 -82232920 - AluJb SINE Alu -13 299 195 1848 178 7 0 chr18 3756035 3756339 -82232595 - AluJb SINE Alu -6 306 1 2257 98 0 7 chr18 3756721 3757017 -82231917 + AluSq SINE Alu 1 294 -19 1647 206 66 34 chr18 3757021 3757463 -82231471 + L1P LINE L1 3784 4239 -1907 234 0 0 0 chr18 3757599 3757625 -82231309 + (A)n Simple_repeat Simple_repeat 1 26 0 2303 110 0 0 chr18 3758293 3758584 -82230350 + AluSx SINE Alu 1 291 -21 1666 197 0 26 chr18 3758923 3759233 -82229701 + AluJo SINE Alu 1 302 -10 21 0 0 0 chr18 3759817 3759838 -82229096 + AT_rich Low_complexity Low_complexity 1 21 0 1947 170 0 3 chr18 3760099 3760405 -82228529 + AluJo SINE Alu 5 309 -3 306 250 172 12 chr18 3761045 3761215 -82227719 - MIR SINE MIR -48 214 20 2286 102 0 0 chr18 3761695 3761988 -82226946 + AluSg1 SINE Alu 1 293 -16 463 230 0 0 chr18 3763155 3763246 -82225688 + L1ME2 LINE L1 6065 6158 -6 216 0 0 0 chr18 3763246 3763270 -82225664 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 240 35 0 0 chr18 3763482 3763511 -82225423 + (TG)n Simple_repeat Simple_repeat 2 30 0 306 0 0 0 chr18 3764385 3764419 -82224515 + (T)n Simple_repeat Simple_repeat 1 34 0 49 52 0 0 chr18 3764419 3764496 -82224438 + GC_rich Low_complexity Low_complexity 1 77 0 2598 55 3 0 chr18 3764652 3764962 -82223972 - AluY SINE Alu 0 311 1 297 250 48 24 chr18 3768223 3768307 -82220627 - MIR3 SINE MIR -24 184 99 2127 101 38 0 chr18 3769126 3769414 -82219520 - AluSx SINE Alu -13 299 1 1812 179 0 13 chr18 3770129 3770436 -82218498 + AluJo SINE Alu 2 304 -8 2241 101 10 0 chr18 3772455 3772753 -82216181 + AluSx SINE Alu 1 301 -11 416 248 74 20 chr18 3773075 3773249 -82215685 + L1ME4a LINE L1 5699 5884 -237 27 0 0 0 chr18 3774144 3774171 -82214763 + AT_rich Low_complexity Low_complexity 1 27 0 30 27 0 0 chr18 3775150 3775187 -82213747 + AT_rich Low_complexity Low_complexity 1 37 0 429 216 63 0 chr18 3775270 3775381 -82213553 + Tigger6 DNA MER2_type 92 209 -874 2386 147 33 21 chr18 3775481 3775902 -82213032 - MSTB LTR MaLR 0 426 1 2185 91 11 0 chr18 3775944 3776264 -82212670 + AluSq SINE Alu 1 323 0 1961 204 89 44 chr18 3776277 3776622 -82212312 + L1MC4a LINE L1 6243 6571 -1237 306 0 0 0 chr18 3776622 3776656 -82212278 + (TG)n Simple_repeat Simple_repeat 2 35 0 1961 204 89 44 chr18 3776656 3776952 -82211982 + L1MC4a LINE L1 6571 6913 -895 441 281 79 26 chr18 3777138 3777405 -82211529 + MARNA DNA Mariner 299 579 -7 1323 170 8 4 chr18 3777572 3777807 -82211127 + MER46A DNA MER2_type 1 236 0 299 300 0 0 chr18 3777946 3778016 -82210918 + MLT1K LTR MaLR 285 354 -234 2159 91 32 19 chr18 3778179 3778487 -82210447 + AluSx SINE Alu 1 312 0 28 0 0 0 chr18 3778487 3778515 -82210419 + AT_rich Low_complexity Low_complexity 1 28 0 30 0 0 0 chr18 3778527 3778557 -82210377 + AT_rich Low_complexity Low_complexity 1 30 0 24 32 0 0 chr18 3778716 3778747 -82210187 + GC_rich Low_complexity Low_complexity 1 31 0 348 64 0 0 chr18 3778766 3778813 -82210121 + (A)n Simple_repeat Simple_repeat 1 47 0 2033 102 0 27 chr18 3780502 3780797 -82208137 + AluSx SINE Alu 1 287 -25 369 0 0 0 chr18 3780797 3780838 -82208096 + (TG)n Simple_repeat Simple_repeat 2 42 0 22 0 0 0 chr18 3782860 3782882 -82206052 + AT_rich Low_complexity Low_complexity 1 22 0 219 214 0 0 chr18 3783057 3783099 -82205835 + L2 LINE L2 3271 3312 -1 377 182 11 23 chr18 3783204 3783292 -82205642 - L1MD1 LINE L1 0 6242 6156 2374 95 0 3 chr18 3784612 3784917 -82204017 + AluSx SINE Alu 1 304 -8 231 36 0 0 chr18 3785234 3785262 -82203672 + (A)n Simple_repeat Simple_repeat 1 28 0 1145 164 125 69 chr18 3785302 3785637 -82203297 + MLT1A2 LTR MaLR 21 374 0 234 329 198 21 chr18 3785746 3785983 -82202951 - L3 LINE CR1 -257 1320 1042 1977 115 7 16 chr18 3786400 3786704 -82202230 + AluSx SINE Alu 1 301 -11 1867 171 0 3 chr18 3786893 3787191 -82201743 - AluJb SINE Alu -15 297 1 458 301 175 5 chr18 3787305 3787511 -82201423 - MIR SINE MIR -4 258 18 214 341 50 45 chr18 3789496 3789675 -82199259 - L2 LINE L2 -160 3112 2933 182 292 31 15 chr18 3790042 3790107 -82198827 - MER5B DNA MER1_type 0 178 113 199 301 41 27 chr18 3790552 3790625 -82198309 + MER5A DNA MER1_type 1 74 -115 279 284 147 9 chr18 3790659 3790768 -82198166 + MER5A DNA MER1_type 63 186 -3 26 0 0 0 chr18 3791693 3791719 -82197215 + AT_rich Low_complexity Low_complexity 1 26 0 273 224 75 0 chr18 3792476 3792543 -82196391 + L2 LINE L2 3234 3305 -8 228 111 0 0 chr18 3792544 3792580 -82196354 + (TGAA)n Simple_repeat Simple_repeat 3 38 0 2148 98 14 10 chr18 3792719 3793042 -82195892 + AluSx SINE Alu 1 312 0 1744 221 82 20 chr18 3794165 3794587 -82194347 - L1ME1 LINE L1 -15 6151 5692 1899 127 96 9 chr18 3794587 3794919 -82194015 - MER46B DNA MER2_type 0 236 1 1744 221 82 20 chr18 3794919 3794998 -82193936 - L1ME1 LINE L1 -474 5692 5619 2026 71 64 11 chr18 3795049 3795330 -82193604 - AluY SINE Alu -13 298 3 1559 193 0 23 chr18 3795663 3795969 -82192965 + AluJb SINE Alu 1 299 -13 369 307 100 0 chr18 3795988 3796137 -82192797 - MIR SINE MIR -53 209 47 2081 98 7 0 chr18 3796297 3796574 -82192360 - AluSp SINE Alu -22 291 13 1631 156 53 3 chr18 3797878 3798160 -82190774 + AluJb SINE Alu 1 296 -16 2980 194 89 77 chr18 3798201 3798863 -82190071 + L1MC4a LINE L1 6525 7208 -600 2050 119 20 7 chr18 3798863 3799165 -82189769 + AluSx SINE Alu 1 306 -6 2980 194 89 77 chr18 3799165 3799610 -82189324 + L1MC4a LINE L1 7208 7646 -162 472 160 13 0 chr18 3800019 3800094 -82188840 - AluS SINE Alu -237 76 1 22 35 0 0 chr18 3800621 3800650 -82188284 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr18 3803293 3803329 -82185605 + AT_rich Low_complexity Low_complexity 1 36 0 1250 171 48 22 chr18 3804521 3804836 -82184098 + MER33 DNA MER1_type 2 324 0 348 321 30 30 chr18 3805663 3805797 -82183137 - MIR3 SINE MIR -65 143 10 186 43 0 0 chr18 3807503 3807526 -82181408 + (A)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr18 3808626 3808647 -82180287 + AT_rich Low_complexity Low_complexity 1 21 0 1654 106 110 0 chr18 3808764 3809001 -82179933 + AluSx SINE Alu 50 312 0 249 33 0 0 chr18 3809151 3809181 -82179753 + (A)n Simple_repeat Simple_repeat 1 30 0 438 278 39 39 chr18 3810160 3810340 -82178594 - MIR SINE MIR -6 256 77 3219 186 74 25 chr18 3810430 3810778 -82178156 + L1MB4 LINE L1 4382 4712 -1462 2123 124 3 0 chr18 3810778 3811076 -82177858 + AluSx SINE Alu 1 299 -13 3219 186 74 25 chr18 3811076 3811786 -82177148 + L1MB4 LINE L1 4712 5498 -676 2512 157 67 78 chr18 3812446 3812583 -82176351 + L1MB4 LINE L1 5478 5615 -565 1327 212 58 7 chr18 3812583 3812857 -82176077 + AluJb SINE Alu 1 288 -24 2512 157 67 78 chr18 3812857 3812869 -82176065 + L1MB4 LINE L1 5615 5626 -554 2209 107 3 0 chr18 3812869 3813160 -82175774 + AluSg1 SINE Alu 1 292 -17 2512 157 67 78 chr18 3813160 3813677 -82175257 + L1MB4 LINE L1 5626 6138 -42 1573 176 32 35 chr18 3813707 3813840 -82175094 + AluJo SINE Alu 1 133 -179 2310 61 38 10 chr18 3813840 3814133 -82174801 + AluY SINE Alu 1 301 -10 1573 176 32 35 chr18 3814133 3814312 -82174622 + AluJo SINE Alu 133 312 0 184 127 42 42 chr18 3814316 3814387 -82174547 + GA-rich Low_complexity Low_complexity 2 72 0 183 333 67 0 chr18 3814496 3814616 -82174318 + MIR3 SINE MIR 54 181 -27 227 289 0 19 chr18 3815311 3815363 -82173571 + Zaphod DNA AcHobo 31 81 -3950 687 97 89 24 chr18 3815624 3815748 -82173186 - L1MA4 LINE L1 -5 6295 6164 765 124 143 100 chr18 3815775 3815985 -82172949 - MER20 DNA MER1_type 0 219 1 304 184 0 103 chr18 3815985 3816063 -82172871 + Zaphod DNA AcHobo 3959 4029 -2 877 272 43 67 chr18 3816613 3817029 -82171905 + MARNA DNA Mariner 78 483 -103 2173 107 0 3 chr18 3817196 3817486 -82171448 + AluSc SINE Alu 1 289 -20 234 0 0 0 chr18 3817605 3817631 -82171303 + (T)n Simple_repeat Simple_repeat 1 26 0 2628 65 0 0 chr18 3817748 3818057 -82170877 - AluY SINE Alu -2 309 1 2284 116 0 0 chr18 3818264 3818566 -82170368 - AluSx SINE Alu -8 304 3 551 103 0 23 chr18 3818578 3818665 -82170269 - AluSq/x SINE Alu -179 133 49 338 295 74 7 chr18 3819647 3819796 -82169138 - L2 LINE L2 -49 3264 3106 1586 140 36 46 chr18 3820344 3820523 -82168411 + MLT1C LTR MaLR 1 177 -290 2260 80 3 32 chr18 3820523 3820837 -82168097 + AluY SINE Alu 3 307 -4 1586 140 36 46 chr18 3820837 3820964 -82167970 + MLT1C LTR MaLR 177 304 -163 313 210 30 30 chr18 3820964 3821064 -82167870 + HAL1 LINE L1 1024 1123 -1384 676 196 7 14 chr18 3821065 3821203 -82167731 + AluJo SINE Alu 84 220 -92 618 131 0 0 chr18 3821267 3821366 -82167568 + (GGA)n Simple_repeat Simple_repeat 2 100 0 548 252 27 76 chr18 3821377 3821639 -82167295 + HAL1 LINE L1 1128 1376 -1131 247 320 25 6 chr18 3822121 3822220 -82166714 + GA-rich Low_complexity Low_complexity 1 165 0 1077 217 60 4 chr18 3822269 3822518 -82166416 + HAL1 LINE L1 1555 1817 -690 666 261 110 10 chr18 3822553 3822863 -82166071 + HAL1 LINE L1 1986 2326 -181 311 214 48 0 chr18 3824246 3824330 -82164604 - MIR SINE MIR -56 206 119 4271 163 76 61 chr18 3824642 3825697 -82163237 + MER11C LTR ERVK 1 1071 0 2261 121 0 6 chr18 3826282 3826595 -82162339 + AluSx SINE Alu 1 311 -1 1538 177 11 18 chr18 3826607 3826890 -82162044 + AluJo SINE Alu 1 281 -31 279 0 0 0 chr18 3826891 3826922 -82162012 + (CA)n Simple_repeat Simple_repeat 2 32 0 674 222 0 0 chr18 3826959 3827085 -82161849 + FLAM_C SINE Alu 2 127 -16 205 324 145 14 chr18 3827238 3827383 -82161551 + MIR SINE MIR 84 247 -15 1712 113 43 66 chr18 3827636 3827771 -82161163 + AluJb SINE Alu 1 138 -174 2210 91 0 7 chr18 3827771 3828068 -82160866 + AluY SINE Alu 1 295 -16 1712 113 43 66 chr18 3828068 3828234 -82160700 + AluJb SINE Alu 138 295 -17 2307 76 0 13 chr18 3828382 3828684 -82160250 - AluY SINE Alu -8 303 6 21 0 0 0 chr18 3828696 3828717 -82160217 + AT_rich Low_complexity Low_complexity 1 21 0 1937 141 3 3 chr18 3829378 3829668 -82159266 + AluJb SINE Alu 1 290 -22 186 43 0 0 chr18 3829909 3829932 -82159002 + (TTCC)n Simple_repeat Simple_repeat 1 23 0 909 189 47 28 chr18 3829962 3830174 -82158760 - AluJo SINE Alu -34 278 63 726 137 8 24 chr18 3830205 3830329 -82158605 + FLAM_C SINE Alu 3 124 -9 2027 109 0 0 chr18 3830336 3830602 -82158332 + AluY SINE Alu 1 266 -45 2383 95 0 7 chr18 3830654 3830959 -82157975 - AluSx SINE Alu -9 303 1 238 330 41 10 chr18 3831819 3831916 -82157018 + L3b LINE CR1 1307 1406 -177 2099 103 3 7 chr18 3832622 3832914 -82156020 + AluSx SINE Alu 1 291 -21 180 0 0 0 chr18 3833801 3833821 -82155113 + (A)n Simple_repeat Simple_repeat 1 20 0 547 265 97 68 chr18 3834138 3834238 -82154696 + L2 LINE L2 2956 3052 -261 225 0 0 0 chr18 3834238 3834263 -82154671 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 1996 94 22 4 chr18 3834265 3834540 -82154394 - AluY SINE Alu -31 280 1 547 265 97 68 chr18 3834540 3834582 -82154352 + L2 LINE L2 3052 3091 -222 1588 195 10 13 chr18 3834582 3834890 -82154044 - AluJo SINE Alu -5 307 1 547 265 97 68 chr18 3834890 3835083 -82153851 + L2 LINE L2 3091 3305 -8 1677 193 7 7 chr18 3835084 3835384 -82153550 - AluJb SINE Alu -12 300 1 2444 47 23 17 chr18 3835782 3836083 -82152851 - AluY SINE Alu -8 303 1 300 70 0 0 chr18 3836168 3836211 -82152723 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2163 110 7 0 chr18 3836917 3837207 -82151727 - AluSx SINE Alu -20 292 1 2411 55 7 0 chr18 3837243 3837535 -82151399 + AluY SINE Alu 1 294 -17 1793 154 0 34 chr18 3837537 3837829 -82151105 - AluJb SINE Alu -30 282 1 530 240 109 16 chr18 3837973 3838165 -82150769 - MIR SINE MIR -49 213 4 2405 78 3 0 chr18 3838513 3838808 -82150126 - AluSp SINE Alu -17 296 1 670 176 84 0 chr18 3839324 3839455 -82149479 + L1PA16 LINE L1 6025 6166 0 21 0 0 31 chr18 3839543 3839560 -82149374 + AT_rich Low_complexity Low_complexity 1 18 -13 1914 169 0 0 chr18 3839560 3839844 -82149090 + AluJo SINE Alu 1 284 -28 21 0 0 31 chr18 3839844 3839858 -82149076 + AT_rich Low_complexity Low_complexity 18 31 0 1770 142 0 34 chr18 3839860 3840155 -82148779 + AluSx SINE Alu 4 288 -24 227 285 58 47 chr18 3841347 3841560 -82147374 + MIR SINE MIR 39 253 -9 2586 50 0 3 chr18 3841651 3841953 -82146981 - AluY SINE Alu -10 301 1 314 234 16 65 chr18 3842044 3842168 -82146766 - MIR SINE MIR -19 243 126 1736 164 10 17 chr18 3842491 3842789 -82146145 + AluJb SINE Alu 1 296 -16 1894 130 3 109 chr18 3842989 3843215 -82145719 - MER2 DNA MER2_type 0 344 174 2199 101 0 0 chr18 3843215 3843493 -82145441 + AluSx SINE Alu 14 291 -21 1894 130 3 109 chr18 3843493 3843651 -82145283 - MER2 DNA MER2_type -170 174 1 199 256 0 0 chr18 3844366 3844405 -82144529 - L2 LINE L2 -23 3290 3252 695 162 24 108 chr18 3844662 3844733 -82144201 - MER7A DNA MER2_type -2887 151 102 2172 122 0 7 chr18 3844733 3845037 -82143897 + AluSx SINE Alu 3 304 -8 695 162 24 108 chr18 3845037 3845132 -82143802 - MER7A DNA MER2_type -2936 102 1 682 146 9 9 chr18 3846099 3846209 -82142725 + AluJo SINE Alu 16 125 -187 2425 86 3 13 chr18 3846227 3846542 -82142392 - AluSp SINE Alu -1 312 1 818 156 0 0 chr18 3846549 3846677 -82142257 - FLAM_C SINE Alu -5 128 1 795 229 12 0 chr18 3846677 3846847 -82142087 + AluJo SINE Alu 119 290 -22 1946 156 3 10 chr18 3847819 3848126 -82140808 - AluSx SINE Alu -7 305 1 300 267 53 8 chr18 3848345 3848476 -82140458 - L1ME LINE L1 -403 5718 5582 549 196 0 18 chr18 3848576 3848688 -82140246 - AluJo SINE Alu -1 311 202 5336 56 8 11 chr18 3848692 3849338 -82139596 + SVA Other Other 740 1383 -3 541 220 139 29 chr18 3849357 3849530 -82139404 + LTR23-int LTR ERV1 802 993 -4130 633 217 202 10 chr18 3849531 3849729 -82139205 + MER34C LTR ERV1 162 397 -188 555 141 73 147 chr18 3849729 3849920 -82139014 + LTR23-int LTR ERV1 1197 1373 -3750 1134 175 0 10 chr18 3849935 3850129 -82138805 - AluJo SINE Alu -101 211 20 2563 290 155 31 chr18 3850559 3850759 -82138175 + L2 LINE L2 842 1016 -2298 1959 148 7 7 chr18 3850759 3851056 -82137878 + AluSx SINE Alu 1 297 -15 2563 290 155 31 chr18 3851056 3851705 -82137229 + L2 LINE L2 1016 1583 -1731 2310 115 0 3 chr18 3851705 3852019 -82136915 - AluSq SINE Alu 0 313 1 2563 290 155 31 chr18 3852019 3852804 -82136130 + L2 LINE L2 1583 2269 -1045 2560 53 7 0 chr18 3852804 3853104 -82135830 - AluY SINE Alu -9 302 1 2563 290 155 31 chr18 3853104 3853362 -82135572 + L2 LINE L2 2269 2971 -343 2112 119 0 36 chr18 3853518 3853821 -82135113 - AluSx SINE Alu -20 292 1 1728 155 0 22 chr18 3853930 3854207 -82134727 + AluJo SINE Alu 13 283 -29 26 30 0 0 chr18 3854570 3854603 -82134331 + AT_rich Low_complexity Low_complexity 1 33 0 543 45 0 0 chr18 3854720 3854787 -82134147 + L1PB2 LINE L1 5928 5994 -157 2245 96 0 40 chr18 3855123 3855446 -82133488 - AluY SINE Alu -1 310 1 335 250 52 21 chr18 3855623 3855719 -82133215 - L2 LINE L2 -5 3308 3210 678 283 76 0 chr18 3855968 3856191 -82132743 + MIR SINE MIR 4 243 -19 1839 183 86 6 chr18 3856460 3856821 -82132113 - MLT1B LTR MaLR 0 390 1 2211 110 3 3 chr18 3856928 3857227 -82131707 - AluSq SINE Alu -14 299 1 1723 140 47 0 chr18 3857749 3858006 -82130928 + AluJo SINE Alu 18 286 -26 180 0 0 0 chr18 3858222 3858242 -82130692 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2278 124 0 0 chr18 3859043 3859349 -82129585 - AluSx SINE Alu -6 306 1 222 130 152 0 chr18 3859844 3859890 -82129044 + L2 LINE L2 3220 3272 0 1446 146 98 33 chr18 3859915 3860190 -82128744 - AluJo SINE Alu -17 295 3 1001 263 95 44 chr18 3861650 3862061 -82126873 - L1MEc LINE L1 -5699 697 266 443 277 118 52 chr18 3862285 3862650 -82126284 - L1MEd LINE L1 -5488 631 243 2204 108 10 0 chr18 3862759 3863055 -82125879 - AluJb SINE Alu -13 299 1 24 0 0 0 chr18 3863255 3863279 -82125655 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr18 3863432 3863457 -82125477 + AT_rich Low_complexity Low_complexity 1 25 0 2401 73 3 7 chr18 3863457 3863757 -82125177 - AluSp SINE Alu -10 303 5 180 0 0 0 chr18 3864444 3864464 -82124470 + (CCCCCA)n Simple_repeat Simple_repeat 3 22 0 1853 148 11 3 chr18 3864862 3865145 -82123789 - AluJo SINE Alu -23 289 5 407 19 19 0 chr18 3865181 3865233 -82123701 + (TG)n Simple_repeat Simple_repeat 1 53 0 3067 194 101 29 chr18 3867132 3867823 -82121111 - L1MD2 LINE L1 -24 6335 5595 25 0 0 0 chr18 3867826 3867851 -82121083 + AT_rich Low_complexity Low_complexity 1 25 0 836 153 0 0 chr18 3867856 3867974 -82120960 - FLAM_C SINE Alu -25 118 1 994 157 9 101 chr18 3867977 3868262 -82120672 - L1M2 LINE L1 -573 5591 5346 1649 173 7 24 chr18 3869053 3869348 -82119586 - AluJo SINE Alu -20 292 3 405 86 0 0 chr18 3869636 3869694 -82119240 + (TG)n Simple_repeat Simple_repeat 1 58 0 1702 136 57 0 chr18 3869694 3869958 -82118976 - AluJb SINE Alu -33 279 1 235 175 0 0 chr18 3869961 3870001 -82118933 + MER4E LTR ERV1 667 706 -73 2265 101 7 0 chr18 3870268 3870556 -82118378 - AluSx SINE Alu -22 290 1 2228 108 0 10 chr18 3870954 3871251 -82117683 - AluSg SINE Alu -16 294 1 * 2318 109 0 0 chr18 3871251 3871552 -82117382 - AluSx SINE Alu -11 301 1 853 138 23 0 chr18 3871879 3872009 -82116925 - FLAM_C SINE Alu 0 133 1 250 283 51 65 chr18 3872104 3872242 -82116692 + MER91A DNA MER1_type 37 172 -24 319 169 12 60 chr18 3872451 3872534 -82116400 + MIR3 SINE MIR 81 159 -49 1759 153 40 0 chr18 3872623 3872898 -82116036 + MER61D LTR ERV1 216 501 0 2187 88 58 3 chr18 3873696 3873991 -82114943 - AluSx SINE Alu -1 311 1 2091 117 10 17 chr18 3874964 3875264 -82113670 - AluSx SINE Alu -14 298 1 1931 98 29 4 chr18 3875619 3875896 -82113038 - AluSc SINE Alu -14 295 12 1792 157 10 33 chr18 3875908 3876213 -82112721 - AluJo SINE Alu -13 299 2 189 125 62 0 chr18 3876379 3876411 -82112523 + MIR3 SINE MIR 125 158 -50 26 0 0 0 chr18 3876596 3876622 -82112312 + AT_rich Low_complexity Low_complexity 1 26 0 2348 96 0 0 chr18 3876940 3877233 -82111701 - AluSx SINE Alu -15 297 5 1679 180 20 20 chr18 3877314 3877620 -82111314 - AluJb SINE Alu -1 311 6 1121 197 119 26 chr18 3877735 3878004 -82110930 - AluJo SINE Alu -14 298 5 255 247 81 48 chr18 3879067 3879253 -82109681 + L1ME4a LINE L1 5927 6118 -3 2364 95 0 0 chr18 3879287 3879582 -82109352 + AluSx SINE Alu 1 295 -17 34 65 0 0 chr18 3879620 3879682 -82109252 + AT_rich Low_complexity Low_complexity 1 62 0 2425 85 3 0 chr18 3879747 3880041 -82108893 + AluSg SINE Alu 1 295 -15 294 342 34 0 chr18 3880152 3880269 -82108665 - MIR SINE MIR -92 170 50 2124 126 21 15 chr18 3880821 3881155 -82107779 - MER1B DNA MER1_type 0 337 2 543 275 109 0 chr18 3881207 3881400 -82107534 + MIR SINE MIR 27 240 -22 372 133 0 0 chr18 3882281 3882341 -82106593 + (T)n Simple_repeat Simple_repeat 1 60 0 659 133 100 0 chr18 3882572 3882692 -82106242 - FLAM_C SINE Alu 0 133 2 2253 63 11 7 chr18 3882717 3883002 -82105932 + AluSx SINE Alu 11 296 -16 2121 92 48 0 chr18 3883005 3883298 -82105636 + AluSq SINE Alu 1 307 -6 257 320 48 0 chr18 3883842 3883945 -82104989 + MIR SINE MIR 118 225 -37 216 316 180 18 chr18 3884442 3884714 -82104220 + L2 LINE L2 1696 2011 -1303 859 175 7 13 chr18 3885284 3885438 -82103496 - FRAM SINE Alu -13 163 11 387 336 0 7 chr18 3885924 3886061 -82102873 - MIR SINE MIR -107 155 20 947 119 0 0 chr18 3886129 3886255 -82102679 - AluSq/x SINE Alu -186 127 2 2080 113 14 0 chr18 3886863 3887176 -82101758 + AluSx SINE Alu 1 317 0 1675 178 0 60 chr18 3887212 3887544 -82101390 + AluJo SINE Alu 1 312 0 2211 60 3 39 chr18 3887607 3887890 -82101044 + AluY SINE Alu 1 273 -38 1118 76 0 0 chr18 3888007 3888139 -82100795 - AluSq/x SINE Alu -180 133 2 360 0 0 0 chr18 3889625 3889665 -82099269 + (T)n Simple_repeat Simple_repeat 1 40 0 31 0 0 0 chr18 3889678 3889709 -82099225 + GC_rich Low_complexity Low_complexity 1 31 0 438 36 0 0 chr18 3889829 3889885 -82099049 + (T)n Simple_repeat Simple_repeat 1 56 0 710 178 86 20 chr18 3889885 3890037 -82098897 - FRAM SINE Alu 0 166 5 468 127 28 0 chr18 3892260 3892331 -82096603 - AluS SINE Alu -238 74 2 1051 112 6 29 chr18 3892378 3892548 -82096386 + FRAM SINE Alu 8 173 -3 1685 279 81 29 chr18 3892549 3892912 -82096022 - L1 LINE L1 -1695 4451 4108 1789 156 26 13 chr18 3892912 3893220 -82095714 - AluJb SINE Alu 0 312 1 1685 279 81 29 chr18 3893220 3893778 -82095156 - L1 LINE L1 -2038 4108 3478 327 246 101 40 chr18 3893957 3894254 -82094680 - L1 LINE L1 -2948 3198 2884 2630 48 0 10 chr18 3894297 3894608 -82094326 - AluY SINE Alu -3 308 1 244 167 118 49 chr18 3894625 3894727 -82094207 - MIR SINE MIR 0 262 154 763 271 35 31 chr18 3894729 3894987 -82093947 - MLT1L LTR MaLR -8 607 349 2382 94 0 0 chr18 3895119 3895417 -82093517 - AluSg SINE Alu -12 298 1 2171 112 0 16 chr18 3895561 3895864 -82093070 + AluSg SINE Alu 1 298 -12 2128 126 0 7 chr18 3895891 3896193 -82092741 - AluSx SINE Alu -12 300 1 2337 99 0 3 chr18 3896525 3896829 -82092105 + AluSx SINE Alu 8 310 -2 424 376 5 5 chr18 3897095 3897297 -82091637 - L2 LINE L2 -219 3053 2852 1575 149 58 15 chr18 3898033 3898294 -82090640 - AluJb SINE Alu -40 272 1 2416 98 0 0 chr18 3898376 3898682 -82090252 - AluSx SINE Alu -6 306 1 182 36 0 36 chr18 3898691 3898719 -82090215 + (TTTTTA)n Simple_repeat Simple_repeat 1 27 0 2519 74 0 10 chr18 3898721 3899032 -82089902 - AluY SINE Alu -3 308 1 944 119 0 0 chr18 3899041 3899167 -82089767 - FLAM_C SINE Alu -12 131 6 1848 154 24 0 chr18 3900139 3900431 -82088503 - AluJb SINE Alu -13 299 1 1227 143 0 11 chr18 3900829 3901011 -82087923 + AluJb SINE Alu 127 306 -6 2428 164 31 60 chr18 3901012 3901532 -82087402 + LTR54 LTR ERV1 5 509 -1 1868 147 41 0 chr18 3902400 3902693 -82086241 + AluSx SINE Alu 1 305 -7 722 259 155 3 chr18 3903237 3903553 -82085381 - L1ME3A LINE L1 -246 5924 5561 630 176 0 0 chr18 3903571 3903679 -82085255 + FLAM_A SINE Alu 21 128 -14 2036 98 58 0 chr18 3904346 3904623 -82084311 + AluSx SINE Alu 1 293 -19 239 185 41 0 chr18 3904641 3904702 -82084232 - L1ME3A LINE L1 -696 5469 5403 22 0 0 0 chr18 3904862 3904884 -82084050 + AT_rich Low_complexity Low_complexity 1 22 0 583 252 42 56 chr18 3904979 3905000 -82083934 - L1ME3A LINE L1 -743 5403 5383 3655 43 9 0 chr18 3905000 3905437 -82083497 - L1PA5 LINE L1 -3 6151 5711 583 252 42 56 chr18 3905437 3905459 -82083475 - L1ME3A LINE L1 -763 5383 5362 1171 199 125 62 chr18 3905459 3905882 -82083052 + LTR7 LTR ERV1 1 450 0 583 252 42 56 chr18 3905882 3906267 -82082667 - L1ME3A LINE L1 -784 5362 5028 1013 172 116 95 chr18 3906472 3906821 -82082113 + MSTC LTR MaLR 3 420 -8 263 262 58 48 chr18 3906843 3906946 -82081988 - L1ME3A LINE L1 -1231 4915 4812 30 36 0 18 chr18 3906948 3906961 -82081973 + AT_rich Low_complexity Low_complexity 1 13 -41 863 128 0 0 chr18 3906961 3907078 -82081856 + FLAM_C SINE Alu 1 117 -16 30 36 0 18 chr18 3907078 3907119 -82081815 + AT_rich Low_complexity Low_complexity 13 54 0 782 185 0 27 chr18 3907131 3907277 -82081657 - FLAM_C SINE Alu 0 143 2 745 124 58 36 chr18 3907284 3907421 -82081513 - L1MA8 LINE L1 -7 6284 6145 310 295 72 0 chr18 3907565 3907704 -82081230 - L1ME3A LINE L1 -1542 4604 4456 822 150 0 8 chr18 3907718 3907838 -82081096 + AluJo/FLAM SINE Alu 2 120 -192 2373 97 0 0 chr18 3907840 3908140 -82080794 - AluSx SINE Alu -12 300 1 25 0 0 0 chr18 3908148 3908173 -82080761 + AT_rich Low_complexity Low_complexity 1 25 0 26 0 0 0 chr18 3909746 3909772 -82079162 + AT_rich Low_complexity Low_complexity 1 26 0 303 212 139 73 chr18 3910002 3910153 -82078781 - MIR SINE MIR -34 228 68 2423 99 0 0 chr18 3910568 3910870 -82078064 - AluSx SINE Alu -10 302 1 1559 167 30 50 chr18 3911247 3911384 -82077550 + AluJo SINE Alu 1 139 -173 2362 98 0 0 chr18 3911384 3911679 -82077255 + AluSq SINE Alu 1 295 -18 1559 167 30 50 chr18 3911679 3911840 -82077094 + AluJo SINE Alu 139 293 -19 25 31 0 0 chr18 3911846 3911878 -82077056 + AT_rich Low_complexity Low_complexity 1 32 0 2150 117 0 0 chr18 3912077 3912382 -82076552 - AluSx SINE Alu 0 305 1 277 323 62 0 chr18 3912429 3912525 -82076409 + L2 LINE L2 3212 3313 0 1699 173 21 7 chr18 3912559 3912843 -82076091 - AluJo SINE Alu -24 288 1 469 198 108 0 chr18 3913037 3913148 -82075786 + LTR16A1 LTR ERVL 234 356 -101 432 98 16 0 chr18 3913918 3913979 -82074955 + U7 snRNA snRNA 1 62 -1 785 155 0 0 chr18 4114243 4114359 -81874575 - AluJo/FLAM SINE Alu -194 118 3 737 262 215 39 chr18 4114760 4115409 -81873525 + L2 LINE L2 2544 3311 -2 264 294 92 0 chr18 4115412 4115531 -81873403 - MIR SINE MIR -1 261 132 438 287 67 13 chr18 4116201 4116381 -81872553 + MIR SINE MIR 1 190 -62 26 30 0 0 chr18 4117934 4117967 -81870967 + AT_rich Low_complexity Low_complexity 1 33 0 2080 162 34 7 chr18 4118969 4119376 -81869558 + LTR65 LTR ERV1 1 418 -251 510 216 0 0 chr18 4119418 4119520 -81869414 + LTR65 LTR ERV1 567 668 -1 2049 103 3 10 chr18 4119978 4120269 -81868665 + AluSq SINE Alu 1 289 -24 343 235 88 108 chr18 4120340 4120544 -81868390 - L1M2 LINE L1 -5816 1033 834 1461 153 21 0 chr18 4120815 4121057 -81867877 + AluJo SINE Alu 56 302 -10 753 235 185 66 chr18 4121351 4121422 -81867512 - L2 LINE L2 -5 3308 3247 2182 111 3 0 chr18 4121422 4121728 -81867206 + AluSx SINE Alu 1 307 -5 753 235 185 66 chr18 4121728 4122262 -81866672 - L2 LINE L2 -66 3247 2634 2044 177 10 13 chr18 4122269 4122654 -81866280 + MLT1B LTR MaLR 7 390 0 1598 212 78 32 chr18 4122655 4123117 -81865817 - L2 LINE L2 -688 2626 2144 852 151 48 0 chr18 4123139 4123265 -81865669 + AluJb SINE Alu 4 135 -177 650 348 27 16 chr18 4126071 4126327 -81862607 + MIR SINE MIR 4 262 0 1907 130 20 20 chr18 4126462 4126754 -81862180 - AluJb SINE Alu -20 292 1 416 323 92 18 chr18 4126826 4127043 -81861891 - MIR SINE MIR -10 252 20 210 150 0 0 chr18 4128148 4128188 -81860746 + (CA)n Simple_repeat Simple_repeat 1 40 0 295 274 149 66 chr18 4128205 4128316 -81860618 + MIR SINE MIR 2 102 -160 1990 135 7 10 chr18 4128316 4128613 -81860321 - AluJb SINE Alu -16 296 1 295 274 149 66 chr18 4128613 4128742 -81860192 + MIR SINE MIR 102 262 0 567 226 9 9 chr18 4128945 4129060 -81859874 + MIR3 SINE MIR 82 196 -12 2058 118 24 0 chr18 4129461 4129749 -81859185 - AluSx SINE Alu -16 296 2 2180 98 0 11 chr18 4130084 4130393 -81858541 - AluSg1 SINE Alu 0 306 1 2144 64 18 14 chr18 4130407 4130714 -81858220 - AluY SINE Alu 0 308 1 234 339 0 0 chr18 4132161 4132226 -81856708 + L2 LINE L2 3243 3307 -6 202 229 0 0 chr18 4132593 4132641 -81856293 + T-rich Low_complexity Low_complexity 1 48 0 2243 104 19 82 chr18 4132680 4132964 -81855970 + L1MB3 LINE L1 5780 6030 -153 2042 115 10 7 chr18 4132964 4133252 -81855682 + AluSg SINE Alu 1 289 -21 2243 104 19 82 chr18 4133252 4133391 -81855543 + L1MB3 LINE L1 6030 6176 -7 1576 246 54 32 chr18 4133400 4133904 -81855030 - LTR40a LTR ERVL -4 515 1 1058 256 30 3 chr18 4134028 4134356 -81854578 - L1ME1 LINE L1 -5 6161 5825 665 293 6 6 chr18 4134646 4134810 -81854124 + MER5B DNA MER1_type 2 165 -13 2329 88 3 23 chr18 4135114 4135422 -81853512 + AluSp SINE Alu 1 302 -11 13557 211 11 24 chr18 4135524 4135801 -81853133 + L1PB3 LINE L1 2565 2844 -4729 2067 104 0 0 chr18 4135801 4136060 -81852874 - AluSg SINE Alu -17 293 35 13557 211 11 24 chr18 4136060 4137729 -81851205 + L1PB3 LINE L1 2844 4534 -3039 1790 168 3 7 chr18 4137729 4138021 -81850913 + AluJb SINE Alu 1 291 -21 13557 211 11 24 chr18 4138021 4139546 -81849388 + L1PB3 LINE L1 4534 6386 -1187 2237 94 3 3 chr18 4139546 4139843 -81849091 + AluY SINE Alu 1 297 -14 13557 211 11 24 chr18 4139843 4140465 -81848469 + L1PB3 LINE L1 6386 7015 -558 747 131 0 0 chr18 4140514 4140621 -81848313 - FLAM_C SINE Alu -32 111 5 2185 113 0 0 chr18 4140637 4140963 -81847971 - AluSx SINE Alu 0 326 1 3667 106 13 6 chr18 4140978 4141523 -81847411 + L1PB3 LINE L1 7018 7566 -7 25 0 0 0 chr18 4141534 4141559 -81847375 + AT_rich Low_complexity Low_complexity 1 25 0 1185 199 5 9 chr18 4141614 4141830 -81847104 - AluJo SINE Alu -12 300 86 235 286 0 0 chr18 4141928 4141984 -81846950 - MER5A DNA MER1_type -6 183 128 1265 129 50 10 chr18 4141986 4142187 -81846747 + AluSq SINE Alu 85 293 -20 379 186 8 31 chr18 4142204 4142313 -81846621 - MER5A DNA MER1_type -80 109 4 285 216 148 0 chr18 4142318 4142406 -81846528 - L1MC5 LINE L1 -527 7434 7334 1721 147 39 3 chr18 4142522 4142829 -81846105 + Tigger3(Golem) DNA MER2_type 2711 3028 -1 525 337 0 0 chr18 4144094 4144266 -81844668 + MIR SINE MIR 88 259 -3 2296 58 7 7 chr18 4145053 4145347 -81843587 + AluY SINE Alu 1 294 -17 30 45 0 0 chr18 4145669 4145713 -81843221 + AT_rich Low_complexity Low_complexity 1 44 0 23 54 0 0 chr18 4145905 4145942 -81842992 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr18 4146133 4146155 -81842779 + AT_rich Low_complexity Low_complexity 1 22 0 1307 253 28 43 chr18 4146203 4146389 -81842545 + L1ME1 LINE L1 5636 5823 -343 2517 58 10 10 chr18 4146389 4146700 -81842234 + AluSx SINE Alu 1 311 -1 1307 253 28 43 chr18 4146700 4147050 -81841884 + L1ME1 LINE L1 5823 6164 -2 647 122 56 0 chr18 4147234 4147341 -81841593 - AluJb SINE Alu -30 282 170 1084 76 69 0 chr18 4147442 4147613 -81841321 + AluSg/x SINE Alu 128 308 0 1284 0 27 0 chr18 4147760 4147907 -81841027 + L1PA4 LINE L1 5998 6148 -7 214 316 194 0 chr18 4148244 4148342 -81840592 - MIR3 SINE MIR -28 180 64 939 234 35 26 chr18 4152163 4152389 -81836545 + MIR SINE MIR 21 248 -14 305 206 41 27 chr18 4152760 4152833 -81836101 + L2 LINE L2 3192 3265 -7 238 310 239 0 chr18 4152896 4153009 -81835925 - MIR3 SINE MIR -63 145 6 1846 155 24 7 chr18 4154694 4154985 -81833949 - AluJb SINE Alu -16 296 1 180 271 21 0 chr18 4155155 4155203 -81833731 - L2 LINE L2 -6 3266 3218 1767 169 17 7 chr18 4155771 4156067 -81832867 + AluJo SINE Alu 1 299 -13 376 338 27 14 chr18 4156543 4156691 -81832243 + MIR SINE MIR 2 151 -111 207 147 400 32 chr18 4156735 4156830 -81832104 + MIR SINE MIR 14 143 -119 498 189 66 0 chr18 4157767 4157873 -81831061 + MER3 DNA MER1_type 2 114 -95 2285 78 0 3 chr18 4157874 4158167 -81830767 + AluSc SINE Alu 1 292 -17 999 171 0 0 chr18 4158191 4158355 -81830579 + FAM SINE Alu 5 168 -7 247 173 0 39 chr18 4158378 4158430 -81830504 + MER3 DNA MER1_type 159 208 -1 235 224 0 0 chr18 4158390 4158439 -81830495 - MER3 DNA MER1_type -121 88 40 * 334 269 124 7 chr18 4158589 4158734 -81830200 + MER5A DNA MER1_type 27 188 -1 2241 74 0 4 chr18 4159419 4159690 -81829244 - AluSx SINE Alu -15 297 28 2337 79 0 16 chr18 4159871 4160187 -81828747 + AluY SINE Alu 1 311 0 380 250 133 8 chr18 4160656 4160776 -81828158 + L2 LINE L2 3137 3271 -1 2263 102 0 0 chr18 4160788 4161092 -81827842 + AluSg1 SINE Alu 1 304 -5 300 284 0 12 chr18 4161122 4161203 -81827731 - MER5B DNA MER1_type 0 178 99 247 222 142 68 chr18 4161257 4161419 -81827515 + L1M4 LINE L1 65 238 -6304 306 301 89 92 chr18 4161576 4161846 -81827088 + L1M4 LINE L1 485 755 -5787 2388 88 0 3 chr18 4161846 4162140 -81826794 + AluSc SINE Alu 1 293 -16 306 301 89 92 chr18 4162140 4162261 -81826673 + L1M4 LINE L1 755 875 -5667 362 173 0 0 chr18 4162409 4162484 -81826450 + AluS SINE Alu 226 300 0 11274 226 56 22 chr18 4162484 4163412 -81825522 + L1M4 LINE L1 937 1832 -4850 2247 102 0 10 chr18 4163412 4163717 -81825217 + AluSx SINE Alu 1 302 -10 11274 226 56 22 chr18 4163717 4163946 -81824988 + L1M4 LINE L1 1832 2052 -4630 1858 165 21 0 chr18 4163946 4164237 -81824697 - AluJb SINE Alu -13 299 3 11274 226 56 22 chr18 4164237 4168001 -81820933 + L1M4 LINE L1 2052 6125 -557 390 322 7 42 chr18 4168147 4168290 -81820644 - L2 LINE L2 -1 3271 3134 10419 86 8 0 chr18 4168463 4169819 -81819115 + THE1B-int LTR MaLR 214 1580 0 2322 109 77 40 chr18 4169819 4170127 -81818807 + THE1B LTR MaLR 1 325 -39 2214 122 0 0 chr18 4170127 4170423 -81818511 - AluSx SINE Alu -16 296 1 2322 109 77 40 chr18 4170423 4170464 -81818470 + THE1B LTR MaLR 325 363 -1 201 225 0 0 chr18 4171135 4171175 -81817759 + MIR SINE MIR 59 98 -164 187 329 41 14 chr18 4171180 4171253 -81817681 - L2 LINE L2 -7 3265 3191 383 304 131 11 chr18 4171289 4171480 -81817454 + MIR SINE MIR 27 240 -22 1018 171 40 63 chr18 4171654 4171876 -81817058 - MER20 DNA MER1_type -2 217 1 232 246 14 14 chr18 4171876 4171945 -81816989 - MER112 DNA MER1_type -35 225 157 668 156 90 48 chr18 4171946 4172113 -81816821 + MLT1A2 LTR MaLR 1 174 -216 723 142 0 0 chr18 4172113 4172219 -81816715 + AluSq/x SINE Alu 28 133 -180 1636 146 9 50 chr18 4172223 4172544 -81816390 + AluSx SINE Alu 1 308 -4 911 180 49 38 chr18 4172606 4172789 -81816145 + MLT1A2 LTR MaLR 186 370 -4 639 170 38 0 chr18 4172885 4172991 -81815943 + AluJb SINE Alu 174 283 -29 186 43 0 0 chr18 4173236 4173259 -81815675 + (TGAA)n Simple_repeat Simple_repeat 2 24 0 210 356 82 34 chr18 4173273 4173540 -81815394 + L2 LINE L2 2888 3167 -105 219 340 20 50 chr18 4173972 4174072 -81814862 - MER5A DNA MER1_type -53 136 40 23 33 0 0 chr18 4175325 4175355 -81813579 + AT_rich Low_complexity Low_complexity 1 30 0 2123 125 0 0 chr18 4175364 4175660 -81813274 + AluSx SINE Alu 1 296 -16 613 235 21 77 chr18 4175720 4175954 -81812980 + L1ME1 LINE L1 5942 6162 -4 21 36 0 0 chr18 4176186 4176214 -81812720 + AT_rich Low_complexity Low_complexity 1 28 0 590 329 46 4 chr18 4177265 4177502 -81811432 + MIR SINE MIR 2 248 -14 391 306 29 79 chr18 4177952 4178243 -81810691 - L1MEd LINE L1 -940 1550 1194 931 111 0 22 chr18 4178243 4178378 -81810556 - FLAM_C SINE Alu -1 132 1 391 306 29 79 chr18 4178378 4178564 -81810370 - L1MEd LINE L1 -1296 1194 1000 2770 255 65 91 chr18 4178896 4180443 -81808491 - L2 LINE L2 0 3313 1813 986 151 3 6 chr18 4180455 4180635 -81808299 + L1MB3 LINE L1 5652 5828 -340 2448 66 3 0 chr18 4180635 4180936 -81807998 + AluY SINE Alu 1 302 -9 24 0 0 0 chr18 4181072 4181096 -81807838 + AT_rich Low_complexity Low_complexity 1 24 0 2201 100 3 13 chr18 4181602 4181902 -81807032 + AluSx SINE Alu 1 297 -15 37 0 0 0 chr18 4182493 4182530 -81806404 + GC_rich Low_complexity Low_complexity 1 37 0 1596 139 58 20 chr18 4182561 4182855 -81806079 + L1MB3 LINE L1 5814 6118 -65 2927 118 2 33 chr18 4182859 4183309 -81805625 - MER1A DNA MER1_type -5 524 89 329 154 31 0 chr18 4183352 4183417 -81805517 + L1MB3 LINE L1 6110 6176 -7 212 274 29 88 chr18 4183422 4183524 -81805410 - L2 LINE L2 -1490 1824 1729 2340 199 12 41 chr18 4183552 4184064 -81804870 - MLT1D LTR MaLR -3 502 6 712 243 193 23 chr18 4184069 4184369 -81804565 - L2 LINE L2 -1621 1693 1343 432 258 10 0 chr18 4186324 4186421 -81802513 + MIR3 SINE MIR 107 204 -4 1251 131 4 57 chr18 4186590 4186819 -81802115 + AluJb SINE Alu 1 217 -95 1734 220 57 18 chr18 4187290 4187827 -81801107 + MLT2F LTR ERVL 1 606 -57 488 198 16 141 chr18 4187862 4188054 -81800880 + MER21B LTR ERV1 141 308 -555 291 221 128 23 chr18 4188515 4188601 -81800333 + MER21B LTR ERV1 620 714 -149 433 253 10 0 chr18 4188604 4188703 -81800231 - L1MC5 LINE L1 -72 7889 7790 198 0 0 0 chr18 4188853 4188875 -81800059 + (T)n Simple_repeat Simple_repeat 1 22 0 2084 118 0 38 chr18 4188999 4189313 -81799621 - AluSx SINE Alu -10 302 1 1908 138 10 19 chr18 4189510 4189822 -81799112 + AluSx SINE Alu 4 312 0 1945 79 4 0 chr18 4190486 4190739 -81798195 + AluSp SINE Alu 1 254 -59 709 273 42 34 chr18 4191308 4191420 -81797514 + MIR SINE MIR 20 130 -132 4775 103 8 3 chr18 4191420 4192051 -81796883 - MER51A LTR ERV1 0 634 1 709 273 42 34 chr18 4192051 4192176 -81796758 + MIR SINE MIR 130 259 -3 850 89 0 68 chr18 4192924 4193115 -81795819 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 480 124 21 10 chr18 4193116 4193213 -81795721 + GA-rich Low_complexity Low_complexity 4 101 0 366 254 15 62 chr18 4194729 4194785 -81794149 - MIR SINE MIR -52 210 153 2225 98 3 3 chr18 4194785 4195082 -81793852 - AluSq SINE Alu -16 297 1 366 254 15 62 chr18 4195082 4195155 -81793779 - MIR SINE MIR -109 153 87 310 329 99 36 chr18 4196744 4196966 -81791968 + MIR SINE MIR 21 256 -6 2369 80 0 3 chr18 4197117 4197416 -81791518 - AluY SINE Alu -13 298 1 1888 148 0 17 chr18 4198407 4198697 -81790237 + AluJb SINE Alu 1 285 -27 548 177 0 9 chr18 4198697 4198810 -81790124 + (CATATA)n Simple_repeat Simple_repeat 5 116 0 251 269 0 0 chr18 4199994 4200046 -81788888 - Charlie4 DNA MER1_type -1909 52 1 451 130 122 70 chr18 4200051 4200166 -81788768 + L1MC3 LINE L1 7659 7779 -6 1980 139 3 0 chr18 4202115 4202416 -81786518 - AluSx SINE Alu -10 302 1 287 167 19 0 chr18 4203678 4203732 -81785202 + AluJ/FRAM SINE Alu 215 269 -33 279 79 0 0 chr18 4203848 4203886 -81785048 + (A)n Simple_repeat Simple_repeat 1 38 0 21 36 0 0 chr18 4203981 4204009 -81784925 + AT_rich Low_complexity Low_complexity 1 28 0 1397 65 6 0 chr18 4204341 4204511 -81784423 - L1PA5 LINE L1 0 6154 5984 2046 121 3 0 chr18 4204754 4205044 -81783890 + AluSx SINE Alu 1 291 -21 258 271 315 24 chr18 4205944 4206195 -81782739 - L2 LINE L2 -21 3292 2969 329 281 115 0 chr18 4206308 4206447 -81782487 - L2 LINE L2 -600 2714 2560 2069 119 34 10 chr18 4206945 4207240 -81781694 - AluSx SINE Alu -10 302 1 422 288 56 0 chr18 4207240 4207365 -81781569 - MIR SINE MIR -96 166 35 210 263 120 90 chr18 4207446 4207579 -81781355 - MIR SINE MIR -75 187 51 28 29 0 0 chr18 4207755 4207790 -81781144 + AT_rich Low_complexity Low_complexity 1 35 0 289 145 32 0 chr18 4208313 4208375 -81780559 + CT-rich Low_complexity Low_complexity 1 64 0 194 276 17 0 chr18 4208375 4208433 -81780501 - L2 LINE L2 -1 3271 3213 188 296 0 0 chr18 4208544 4208588 -81780346 - MIR SINE MIR -108 154 111 1794 82 0 0 chr18 4208764 4208983 -81779951 - AluSg/x SINE Alu -16 294 76 2303 80 7 0 chr18 4211230 4211529 -81777405 + AluSp SINE Alu 1 301 -12 1758 129 198 69 chr18 4212544 4212923 -81776011 - MSTA LTR MaLR 0 428 1 271 299 58 22 chr18 4213149 4213286 -81775648 - L2 LINE L2 -833 2481 2340 7792 138 9 23 chr18 4213301 4214243 -81774691 - L1MA3 LINE L1 0 7724 6771 2264 120 0 0 chr18 4214243 4214544 -81774390 - AluSx SINE Alu -11 301 1 7792 138 9 23 chr18 4214544 4215094 -81773840 - L1MA3 LINE L1 -953 6771 6215 2359 77 0 42 chr18 4215094 4215407 -81773527 - AluSg SINE Alu -10 300 1 7792 138 9 23 chr18 4215407 4215799 -81773135 - L1MA3 LINE L1 -1509 6215 5819 1896 157 0 32 chr18 4215799 4216111 -81772823 - AluJo SINE Alu -6 306 5 7792 138 9 23 chr18 4216111 4216286 -81772648 - L1MA3 LINE L1 -1905 5819 5643 2333 121 0 0 chr18 4216286 4216592 -81772342 - AluSx SINE Alu -6 306 1 7792 138 9 23 chr18 4216592 4217573 -81771361 - L1MA3 LINE L1 -2081 5643 4707 6758 98 35 28 chr18 4217570 4218806 -81770128 - L1MA3 LINE L1 -3820 3745 2499 * 339 321 115 32 chr18 4218860 4219021 -81769913 - L2 LINE L2 -1265 2049 1864 2179 154 61 11 chr18 4219021 4219398 -81769536 - MSTD LTR MaLR 0 396 1 339 321 115 32 chr18 4219398 4219454 -81769480 - L2 LINE L2 -1450 1864 1814 369 250 140 0 chr18 4219501 4219601 -81769333 + MER81 DNA DNA 1 114 0 1948 159 0 22 chr18 4219689 4220004 -81768930 - AluJo SINE Alu -4 308 1 1603 213 61 9 chr18 4221111 4221624 -81767310 + MLT2F LTR ERVL 1 585 -78 1110 256 59 86 chr18 4221683 4222273 -81766661 + MER21B LTR ERV1 141 714 -149 388 253 10 0 chr18 4222276 4222375 -81766559 - L1MC5 LINE L1 -72 7889 7790 2391 76 3 3 chr18 4222526 4222828 -81766106 - AluSg SINE Alu -8 302 1 2735 289 27 28 chr18 4222873 4224186 -81764748 + L1PB3 LINE L1 3 1313 -5550 * 13738 206 17 27 chr18 4224181 4224916 -81764018 + L1PB3 LINE L1 1764 2505 -4365 2067 104 0 0 chr18 4224916 4225175 -81763759 - AluSg SINE Alu -17 293 35 13738 206 17 27 chr18 4225175 4226844 -81762090 + L1PB3 LINE L1 2505 4189 -2681 1777 171 3 7 chr18 4226844 4227136 -81761798 + AluJb SINE Alu 1 291 -21 13738 206 17 27 chr18 4227136 4228660 -81760274 + L1PB3 LINE L1 4189 5684 -1186 2292 91 0 3 chr18 4228660 4228958 -81759976 + AluY SINE Alu 1 297 -14 13738 206 17 27 chr18 4228958 4229581 -81759353 + L1PB3 LINE L1 5684 6312 -558 747 131 0 0 chr18 4229630 4229737 -81759197 - FLAM_C SINE Alu -32 111 5 2185 113 0 0 chr18 4229753 4230079 -81758855 - AluSx SINE Alu 0 326 1 3650 108 13 6 chr18 4230094 4230639 -81758295 + L1PB3 LINE L1 6315 6863 -7 27 0 0 0 chr18 4230650 4230677 -81758257 + AT_rich Low_complexity Low_complexity 1 27 0 1185 199 5 9 chr18 4230732 4230948 -81757986 - AluJo SINE Alu -12 300 86 224 304 0 0 chr18 4231046 4231102 -81757832 - MER5A DNA MER1_type -6 183 128 1265 129 50 10 chr18 4231104 4231305 -81757629 + AluSq SINE Alu 85 293 -20 360 194 8 31 chr18 4231322 4231431 -81757503 - MER5A DNA MER1_type -80 109 4 285 216 148 0 chr18 4231436 4231524 -81757410 - L1MC5 LINE L1 -527 7434 7334 1707 150 39 3 chr18 4231640 4231947 -81756987 + Tigger3(Golem) DNA MER2_type 2711 3028 -1 525 337 0 0 chr18 4233212 4233384 -81755550 + MIR SINE MIR 88 259 -3 2076 103 7 13 chr18 4234171 4234473 -81754461 + AluSc SINE Alu 1 300 -9 2403 79 0 10 chr18 4234561 4234866 -81754068 - AluY SINE Alu -9 302 1 262 286 51 10 chr18 4235181 4235279 -81753655 + MER58A DNA MER1_type 1 102 -5 2562 44 0 0 chr18 4235355 4235650 -81753284 + AluY SINE Alu 1 295 -16 30 45 0 0 chr18 4235972 4236016 -81752918 + AT_rich Low_complexity Low_complexity 1 44 0 23 54 0 0 chr18 4236208 4236245 -81752689 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr18 4236437 4236458 -81752476 + AT_rich Low_complexity Low_complexity 1 21 0 1498 236 32 41 chr18 4236506 4236692 -81752242 + L1ME1 LINE L1 5636 5822 -344 2451 68 10 6 chr18 4236692 4237003 -81751931 + AluSx SINE Alu 1 312 0 1498 236 32 41 chr18 4237003 4237350 -81751584 + L1ME1 LINE L1 5822 6164 -2 363 314 85 58 chr18 4237469 4237507 -81751427 - L1M4 LINE L1 -891 5255 5219 1983 123 26 3 chr18 4237507 4237809 -81751125 - AluJb SINE Alu -3 309 1 363 314 85 58 chr18 4237809 4238216 -81750718 - L1M4 LINE L1 -927 5219 4798 2057 110 23 16 chr18 4238321 4238630 -81750304 - AluSx SINE Alu -1 311 1 2607 39 0 0 chr18 4238648 4238953 -81749981 - AluY SINE Alu -6 305 1 376 271 122 60 chr18 4239048 4239258 -81749676 - L1M4 LINE L1 -3650 2496 2256 2321 105 3 0 chr18 4239258 4239564 -81749370 - AluSx SINE Alu -5 307 1 376 271 122 60 chr18 4239564 4239689 -81749245 - L1M4 LINE L1 -3890 2256 2140 447 242 73 6 chr18 4239950 4240115 -81748819 - MER58B DNA MER1_type -19 322 147 1218 241 11 55 chr18 4240183 4240548 -81748386 - MLT2B1 LTR ERVL -171 349 1 685 99 9 36 chr18 4240613 4240724 -81748210 - Tigger5 DNA MER2_type 0 2323 2216 407 247 0 0 chr18 4240723 4240804 -81748130 - Tigger5 DNA MER2_type -2242 81 1 * 630 280 87 10 chr18 4241160 4241588 -81747346 - MLT1J LTR MaLR 0 511 16 3442 62 0 0 chr18 4241592 4242028 -81746906 - L1PA8 LINE L1 -2 6170 5735 13043 111 15 58 chr18 4242028 4243104 -81745830 - Tigger1 DNA MER2_type -208 2210 1286 2327 123 0 0 chr18 4243104 4243414 -81745520 + AluSx SINE Alu 1 310 -2 13043 111 15 58 chr18 4243414 4244645 -81744289 - Tigger1 DNA MER2_type -1132 1286 3 2337 90 0 0 chr18 4244743 4245043 -81743891 - AluSx SINE Alu -12 300 1 1626 156 63 33 chr18 4245116 4245418 -81743516 - AluJo SINE Alu -1 311 1 24 32 0 0 chr18 4247288 4247319 -81741615 + AT_rich Low_complexity Low_complexity 1 31 0 547 198 116 63 chr18 4247414 4247621 -81741313 + L1ME3 LINE L1 5944 6161 -1 234 273 47 102 chr18 4248062 4248190 -81740744 + MIR SINE MIR 30 150 -58 180 0 0 0 chr18 4248314 4248334 -81740600 + (A)n Simple_repeat Simple_repeat 1 20 0 812 277 67 44 chr18 4248484 4248673 -81740261 - L1MC4a LINE L1 -1882 5926 5743 2237 104 3 10 chr18 4248673 4248981 -81739953 - AluSx SINE Alu -6 306 1 812 277 67 44 chr18 4248981 4249242 -81739692 - L1MC4a LINE L1 -2065 5743 5466 2510 72 0 3 chr18 4249535 4249839 -81739095 - AluSg SINE Alu -7 303 1 1582 239 22 12 chr18 4250804 4251082 -81737852 + L1ME3A LINE L1 2 287 -6253 569 90 0 0 chr18 4251082 4251160 -81737774 - MADE1 DNA Mariner 0 80 3 1582 239 22 12 chr18 4251160 4251286 -81737648 + L1ME3A LINE L1 287 410 -6130 340 297 62 23 chr18 4251430 4251558 -81737376 + MIR SINE MIR 113 245 -17 774 82 9 9 chr18 4251975 4252085 -81736849 + FRAM SINE Alu 43 152 -24 845 240 48 10 chr18 4252197 4252489 -81736445 + L1ME3A LINE L1 4826 5128 -1412 783 197 48 0 chr18 4252489 4252677 -81736257 + L1ME3A LINE L1 6153 6349 -215 281 277 87 51 chr18 4252741 4252936 -81735998 + L1ME3A LINE L1 6357 6558 -6 1643 183 0 7 chr18 4252939 4253218 -81735716 - AluJb SINE Alu -11 301 25 381 268 120 12 chr18 4253678 4253925 -81735009 + MLT1F LTR MaLR 270 590 0 611 291 72 14 chr18 4253938 4254161 -81734773 - L2 LINE L2 -862 2452 2217 207 338 38 25 chr18 4254324 4254404 -81734530 + L2 LINE L2 3102 3182 -90 542 253 23 17 chr18 4255842 4256016 -81732918 - MER5B DNA MER1_type -3 175 1 211 286 44 111 chr18 4256033 4256285 -81732649 + L2 LINE L2 2954 3188 -84 356 174 61 25 chr18 4256612 4256757 -81732177 - MIR SINE MIR -29 233 120 215 227 133 40 chr18 4256808 4256824 -81732110 - MIR SINE MIR -133 129 116 1319 208 50 128 chr18 4256824 4257488 -81731446 + LTR9 LTR ERV1 1 612 0 215 227 133 40 chr18 4257488 4257546 -81731388 - MIR SINE MIR -146 116 48 195 152 30 0 chr18 4257531 4257564 -81731370 + MIR SINE MIR 49 82 -180 * 226 235 87 52 chr18 4257607 4257722 -81731212 - MLT1L LTR MaLR 0 615 497 2038 158 0 0 chr18 4258232 4258542 -81730392 - AluSx SINE Alu -2 310 1 26 30 0 0 chr18 4258616 4258649 -81730285 + AT_rich Low_complexity Low_complexity 1 33 0 282 168 84 54 chr18 4259758 4259906 -81729028 + LTR48 LTR ERV1 395 740 -47 2042 112 36 36 chr18 4259937 4260295 -81728639 - THE1B LTR MaLR -6 358 1 4621 184 32 47 chr18 4260480 4261619 -81727315 + MER31-int LTR ERV1 394 1515 -3421 23 68 0 0 chr18 4261684 4261728 -81727206 + AT_rich Low_complexity Low_complexity 1 44 0 292 204 21 11 chr18 4261739 4261832 -81727102 + MER31-int LTR ERV1 1593 1686 -3250 * 310 155 0 0 chr18 4261777 4261835 -81727099 + LTR57-int LTR ERVL 1368 1425 -3918 1712 160 3 7 chr18 4261847 4262153 -81726781 + AluJb SINE Alu 1 305 0 360 184 90 22 chr18 4262158 4262247 -81726687 + AluJ/FLAM SINE Alu 6 93 -209 1039 143 0 25 chr18 4262255 4262416 -81726518 + FRAM SINE Alu 1 40 0 380 313 9 0 chr18 4263089 4263201 -81725733 - MIR3 SINE MIR -7 201 89 906 234 77 22 chr18 4263613 4263835 -81725099 + MIR SINE MIR 12 245 -17 205 164 0 33 chr18 4264025 4264086 -81724848 + (TA)n Simple_repeat Simple_repeat 2 60 0 221 326 35 0 chr18 4264086 4264172 -81724762 - L2 LINE L2 0 3272 3184 1310 177 24 48 chr18 4264194 4264443 -81724491 + AluJo SINE Alu 1 243 -69 1041 205 67 24 chr18 4264443 4264740 -81724194 + L1ME2 LINE L1 5834 6143 -21 1912 187 146 51 chr18 4265824 4266316 -81722618 - MLT1F LTR MaLR -2 540 2 263 245 32 123 chr18 4266488 4266643 -81722291 - Charlie8 DNA MER1_type -2276 141 1 403 288 52 10 chr18 4266655 4266778 -81722156 - MIR SINE MIR -63 145 10 759 193 87 6 chr18 4266852 4267013 -81721921 - MER5B DNA MER1_type -1 177 4 1959 114 55 3 chr18 4267341 4267566 -81721368 + MER44D DNA MER2_type 17 229 -2262 1421 189 140 23 chr18 4267566 4267873 -81721061 + MER2 DNA MER2_type 2 344 0 1959 114 55 3 chr18 4267873 4267954 -81720980 + MER44D DNA MER2_type 229 609 0 208 206 0 0 chr18 4268296 4268330 -81720604 - MER91 DNA MER1_type -30 110 77 400 198 88 11 chr18 4268570 4268661 -81720273 + MIR SINE MIR 50 147 -115 610 373 129 11 chr18 4268787 4269508 -81719426 - L2 LINE L2 -354 2960 2155 185 240 240 8 chr18 4269850 4269971 -81718963 - L2 LINE L2 -1429 1885 1737 387 256 0 11 chr18 4270285 4270375 -81718559 + LTR16B LTR ERVL 372 460 -4 1649 180 10 14 chr18 4270460 4270749 -81718185 - AluJb SINE Alu -24 288 1 327 218 56 13 chr18 4271346 4271450 -81717484 - MER77 LTR ERV1 -13 592 517 250 238 16 48 chr18 4271463 4271526 -81717408 - MIR SINE MIR -171 91 31 657 148 123 33 chr18 4271700 4271822 -81717112 + FLAM_C SINE Alu 1 133 0 226 232 200 11 chr18 4271957 4272052 -81716882 - MIR SINE MIR -48 214 102 270 73 91 36 chr18 4272114 4272169 -81716765 + MIR SINE MIR 135 192 -70 240 254 18 0 chr18 4272229 4272284 -81716650 + MIR SINE MIR 207 262 0 889 144 0 15 chr18 4272361 4272493 -81716441 - FLAM_C SINE Alu -2 131 2 227 157 0 39 chr18 4272654 4272705 -81716229 + T-rich Low_complexity Low_complexity 2 50 0 315 229 46 9 chr18 4273818 4273927 -81715007 - L1MC4 LINE L1 -5 8037 7925 229 209 0 0 chr18 4274113 4274156 -81714778 + L2 LINE L2 3271 3313 0 3032 132 7 0 chr18 4274223 4274654 -81714280 - MER57B LTR ERV1 0 434 1 5092 123 26 9 chr18 4274672 4275444 -81713490 + L1MA3 LINE L1 5520 6304 -1 206 226 16 48 chr18 4276037 4276099 -81712835 + MIR SINE MIR 19 78 -184 * 230 280 53 27 chr18 4276092 4276167 -81712767 - MIR SINE MIR -107 101 25 1193 115 6 0 chr18 4276590 4276755 -81712179 + AluJb SINE Alu 1 166 -146 189 0 0 0 chr18 4276755 4276776 -81712158 + (A)n Simple_repeat Simple_repeat 1 21 0 22 70 0 0 chr18 4278050 4278093 -81710841 + AT_rich Low_complexity Low_complexity 1 43 0 329 327 145 14 chr18 4278412 4278626 -81710308 - MIR SINE MIR -15 247 6 258 271 315 24 chr18 4279368 4279619 -81709315 - L2 LINE L2 -21 3292 2969 329 281 115 0 chr18 4279732 4279871 -81709063 - L2 LINE L2 -600 2714 2560 2069 119 34 10 chr18 4280369 4280664 -81708270 - AluSx SINE Alu -10 302 1 422 288 56 0 chr18 4280664 4280789 -81708145 - MIR SINE MIR -96 166 35 210 263 120 90 chr18 4280870 4281003 -81707931 - MIR SINE MIR -75 187 51 28 29 0 0 chr18 4281179 4281214 -81707720 + AT_rich Low_complexity Low_complexity 1 35 0 289 145 32 0 chr18 4281737 4281799 -81707135 + CT-rich Low_complexity Low_complexity 1 64 0 194 276 17 0 chr18 4281799 4281857 -81707077 - L2 LINE L2 -1 3271 3213 188 296 0 0 chr18 4281968 4282012 -81706922 - MIR SINE MIR -108 154 111 1794 82 0 0 chr18 4282188 4282407 -81706527 - AluSg/x SINE Alu -16 294 76 2303 80 7 0 chr18 4284654 4284953 -81703981 + AluSp SINE Alu 1 301 -12 1758 129 198 69 chr18 4285968 4286347 -81702587 - MSTA LTR MaLR 0 428 1 271 299 58 22 chr18 4286573 4286710 -81702224 - L2 LINE L2 -833 2481 2340 7067 129 8 14 chr18 4286725 4287667 -81701267 - L1MA3 LINE L1 0 6305 5366 2264 120 0 0 chr18 4287667 4287968 -81700966 - AluSx SINE Alu -11 301 1 7067 129 8 14 chr18 4287968 4288518 -81700416 - L1MA3 LINE L1 -939 5366 4814 2268 88 0 19 chr18 4288518 4288826 -81700108 - AluSx SINE Alu -10 302 1 2163 133 0 0 chr18 4289496 4289805 -81699129 - AluSx SINE Alu -3 309 1 2128 95 21 0 chr18 4289808 4290091 -81698843 - AluSx SINE Alu -23 289 1 865 184 0 13 chr18 4290601 4290753 -81698181 + FRAM SINE Alu 1 150 -26 2168 84 3 20 chr18 4291130 4291428 -81697506 + AluSx SINE Alu 1 293 -19 2075 109 6 48 chr18 4291899 4292062 -81696872 - AluSx SINE Alu -14 298 153 2347 103 3 0 chr18 4292062 4292373 -81696561 - AluSp SINE Alu -1 312 1 2075 109 6 48 chr18 4292373 4292520 -81696414 - AluSx SINE Alu -159 153 1 849 142 0 37 chr18 4292707 4292869 -81696065 - L1MB3 LINE L1 0 6183 6028 434 222 0 0 chr18 4292869 4292950 -81695984 + AluJ/FRAM SINE Alu 214 294 -18 298 237 0 0 chr18 4292951 4293027 -81695907 - L1MB4 LINE L1 -147 6033 5958 809 158 14 0 chr18 4293061 4293200 -81695734 - L1MB4 LINE L1 -225 5955 5815 2256 194 35 75 chr18 4293211 4293254 -81695680 - L1MC4 LINE L1 0 8042 7999 2019 140 0 19 chr18 4293254 4293569 -81695365 + AluSx SINE Alu 1 309 -3 2402 81 3 0 chr18 4293569 4293879 -81695055 + AluSp SINE Alu 1 311 -2 2256 194 35 75 chr18 4293879 4294472 -81694462 - L1MC4 LINE L1 -41 8001 7431 2695 30 0 0 chr18 4294483 4294784 -81694150 - AluY SINE Alu -10 301 1 1227 170 90 86 chr18 4294806 4294977 -81693957 + LTR49-int LTR ERV1 1679 1848 -3088 1891 179 3 0 chr18 4294977 4295284 -81693650 - AluJb SINE Alu -4 308 1 1227 170 90 86 chr18 4295284 4295577 -81693357 + LTR49-int LTR ERV1 1848 2145 -2791 1940 157 13 0 chr18 4295589 4295889 -81693045 + AluJo SINE Alu 1 304 -8 301 161 0 36 chr18 4295891 4295947 -81692987 + LTR49-int LTR ERV1 3809 3862 -2469 * 875 187 70 97 chr18 4295914 4296213 -81692721 + LTR49-int LTR ERV1 2412 2702 -2234 367 276 0 0 chr18 4296213 4296288 -81692646 + Tigger5 DNA MER2_type 4 78 -2245 440 129 0 43 chr18 4296288 4296358 -81692576 - Tigger5 DNA MER2_type -3 2320 2254 6025 191 34 91 chr18 4296361 4297568 -81691366 + LTR49-int LTR ERV1 2704 3797 -1139 1056 163 0 6 chr18 4297568 4297740 -81691194 - L1PA16 LINE L1 -6 6160 5990 6025 191 34 91 chr18 4297740 4298166 -81690768 + LTR49-int LTR ERV1 3797 4245 -691 233 218 149 11 chr18 4298175 4298262 -81690672 + LTR37A LTR ERV1 4 102 -324 373 230 70 10 chr18 4298314 4298414 -81690520 + LTR49-int LTR ERV1 4364 4469 -467 420 207 16 37 chr18 4298457 4298559 -81690375 + LTR49-int LTR ERV1 3787 4542 -394 623 196 33 82 chr18 4298643 4298827 -81690107 + LTR49-int LTR ERV1 4575 4749 -187 288 193 100 59 chr18 4299287 4299316 -81689618 + MER34 LTR ERV1 357 383 -159 2696 82 22 3 chr18 4299316 4299672 -81689262 + L1PA13 LINE L1 5801 6163 0 288 193 100 59 chr18 4299672 4299836 -81689098 + MER34 LTR ERV1 383 536 -6 2085 164 3 63 chr18 4299836 4299899 -81689035 - MLT1A1 LTR MaLR -2 363 298 2041 127 7 7 chr18 4299899 4300206 -81688728 - AluSq SINE Alu -6 307 1 2085 164 3 63 chr18 4300206 4300525 -81688409 - MLT1A1 LTR MaLR -67 298 4 352 270 108 0 chr18 4300615 4300726 -81688208 - MER94 DNA DNA -1 133 11 1595 229 146 49 chr18 4300749 4301431 -81687503 + L2 LINE L2 2329 2943 -370 369 93 0 0 chr18 4301431 4301485 -81687449 + (CA)n Simple_repeat Simple_repeat 2 55 0 1254 300 76 5 chr18 4301487 4301907 -81687027 - LTR16A LTR ERVL 0 450 1 1595 229 146 49 chr18 4301907 4301930 -81687004 + L2 LINE L2 2943 3093 -220 501 328 47 10 chr18 4302349 4302541 -81686393 + MIR3 SINE MIR 3 201 -7 2327 103 0 3 chr18 4302682 4302993 -81685941 + AluSq SINE Alu 1 310 -3 240 100 0 0 chr18 4303420 4303460 -81685474 + (TCTA)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr18 4303530 4303551 -81685383 + AT_rich Low_complexity Low_complexity 1 21 0 1460 187 123 0 chr18 4305159 4305427 -81683507 + AluJb SINE Alu 1 301 -1 225 314 59 10 chr18 4305972 4306074 -81682860 - MIR SINE MIR -64 198 92 359 271 151 0 chr18 4306113 4306266 -81682668 - MIR SINE MIR -48 214 38 615 182 277 0 chr18 4306793 4306941 -81681993 + MER53 DNA DNA 1 189 0 2123 135 0 0 chr18 4307121 4307433 -81681501 + AluSx SINE Alu 1 312 0 1358 171 54 46 chr18 4307524 4307804 -81681130 + AluJo SINE Alu 1 282 -30 1265 168 38 102 chr18 4307805 4307975 -81680959 - AluSx SINE Alu -6 296 154 194 0 39 0 chr18 4307975 4308001 -81680933 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1265 168 38 102 chr18 4308001 4308145 -81680789 - AluSx SINE Alu -148 154 2 1387 82 22 0 chr18 4308190 4308374 -81680560 - AluY SINE Alu -123 188 1 823 181 0 0 chr18 4308377 4308510 -81680424 - AluJo/FLAM SINE Alu -169 133 1 180 258 164 47 chr18 4308939 4309067 -81679867 + MIR3 SINE MIR 65 207 -1 1523 173 24 3 chr18 4309205 4309500 -81679434 + AluJb SINE Alu 1 301 -11 23 33 0 0 chr18 4309535 4309565 -81679369 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr18 4310250 4310279 -81678655 + AT_rich Low_complexity Low_complexity 1 29 0 1683 185 3 16 chr18 4310280 4310583 -81678351 + AluJo SINE Alu 1 299 -13 189 121 0 0 chr18 4310760 4310793 -81678141 + (T)n Simple_repeat Simple_repeat 1 33 0 299 189 0 27 chr18 4311518 4311592 -81677342 + CT-rich Low_complexity Low_complexity 4 75 0 1173 162 28 86 chr18 4311696 4311760 -81677174 - MER33 DNA MER1_type -2261 324 258 2023 127 0 0 chr18 4311760 4312072 -81676862 - AluSx SINE Alu 0 314 3 1173 162 28 86 chr18 4312072 4312295 -81676639 - MER33 DNA MER1_type -2327 258 52 478 185 22 0 chr18 4312314 4312406 -81676528 - L1MA6 LINE L1 0 6300 6207 388 203 0 0 chr18 4312412 4312481 -81676453 - MER3 DNA MER1_type -100 109 41 400 285 201 0 chr18 4312503 4312647 -81676287 + MLT1J LTR MaLR 1 173 -338 316 281 96 27 chr18 4312825 4312971 -81675963 + MLT1J LTR MaLR 356 511 0 2104 130 7 0 chr18 4313376 4313675 -81675259 - AluSg SINE Alu -9 301 1 1555 179 40 14 chr18 4313731 4314028 -81674906 + AluJb SINE Alu 1 305 -7 4568 174 69 38 chr18 4314171 4315833 -81673101 + L1MA9 LINE L1 4556 6245 -67 1180 177 5 5 chr18 4315841 4316039 -81672895 + AluJo SINE Alu 1 198 -114 998 173 16 38 chr18 4316038 4316223 -81672711 + AluJo SINE Alu 112 292 -20 * 24 0 0 0 chr18 4316353 4316377 -81672557 + AT_rich Low_complexity Low_complexity 1 24 0 651 365 75 27 chr18 4316526 4316967 -81671967 - L3 LINE CR1 -1073 504 43 1453 233 158 29 chr18 4317980 4318015 -81670919 - MLT2B2 LTR ERVL 0 515 486 230 81 27 0 chr18 4318015 4318052 -81670882 + (TAGA)n Simple_repeat Simple_repeat 4 41 0 1453 233 158 29 chr18 4318052 4318471 -81670463 - MLT2B2 LTR ERVL -29 486 2 595 260 13 0 chr18 4318579 4318733 -81670201 + MER53 DNA DNA 8 163 -26 1768 122 15 0 chr18 4319563 4319834 -81669100 + AluSx SINE Alu 15 289 -23 394 270 40 8 chr18 4320002 4320128 -81668806 + HAL1 LINE L1 15 144 -2363 823 277 62 65 chr18 4320349 4320802 -81668132 + HAL1 LINE L1 602 1055 -1452 2348 83 7 10 chr18 4320802 4321103 -81667831 - AluSq SINE Alu -12 301 2 823 277 62 65 chr18 4321103 4321129 -81667805 + HAL1 LINE L1 1055 1080 -1427 248 254 0 0 chr18 4321134 4321193 -81667741 - HsTC2 DNA Tc2 -14 1884 1826 452 166 20 19 chr18 4321193 4321440 -81667494 + AluJo SINE Alu 1 310 -2 830 273 72 25 chr18 4321443 4321806 -81667128 - HsTC2 DNA Tc2 -69 1829 1274 1020 254 17 0 chr18 4321816 4322056 -81666878 - HsTC2 DNA Tc2 -1158 740 497 529 279 121 5 chr18 4322056 4322246 -81666688 - HsTC2 DNA Tc2 -1680 218 7 2340 107 3 0 chr18 4322271 4322580 -81666354 + AluSg SINE Alu 1 310 0 3162 249 69 49 chr18 4322592 4322825 -81666109 + HAL1 LINE L1 1098 1325 -1182 1755 169 19 16 chr18 4322825 4323132 -81665802 + AluJo SINE Alu 1 308 -4 3162 249 69 49 chr18 4323132 4323245 -81665689 + HAL1 LINE L1 1325 1434 -1073 1353 183 107 31 chr18 4323245 4323535 -81665399 + AluJo SINE Alu 1 312 0 3162 249 69 49 chr18 4323535 4324439 -81664495 + HAL1 LINE L1 1434 2381 -126 1242 186 113 76 chr18 4324439 4324771 -81664163 + MSTD LTR MaLR 1 350 -46 2500 83 3 0 chr18 4324771 4325073 -81663861 + AluSp SINE Alu 1 303 -10 1242 186 113 76 chr18 4325073 4325122 -81663812 + MSTD LTR MaLR 350 396 0 3162 249 69 49 chr18 4325122 4325235 -81663699 + HAL1 LINE L1 2381 2490 -17 254 306 0 27 chr18 4325319 4325430 -81663504 + MIR SINE MIR 96 203 -59 1586 173 121 15 chr18 4325802 4326132 -81662802 - MLT1A1 LTR MaLR 0 365 1 719 198 60 0 chr18 4326138 4326305 -81662629 + L1MD3 LINE L1 7809 7985 -10 246 275 180 48 chr18 4326936 4327103 -81661831 - MER5A DNA MER1_type 0 189 1 2138 89 20 27 chr18 4327150 4327443 -81661491 + AluSx SINE Alu 1 291 -21 2301 141 97 5 chr18 4327447 4327837 -81661097 + MSTB LTR MaLR 1 426 0 1012 83 19 0 chr18 4327848 4328004 -81660930 + (GAAA)n Simple_repeat Simple_repeat 2 160 0 904 142 116 7 chr18 4328064 4328219 -81660715 + AluJo SINE Alu 6 177 -135 468 190 0 60 chr18 4328278 4328394 -81660540 - MLT1I LTR MaLR -292 117 9 688 190 0 0 chr18 4328431 4328552 -81660382 + AluJb SINE Alu 190 310 -2 187 250 0 0 chr18 4329117 4329165 -81659769 + L2 LINE L2 3262 3309 -4 777 181 83 152 chr18 4329314 4329662 -81659272 - MER33 DNA MER1_type 0 324 1 269 235 88 0 chr18 4329690 4329758 -81659176 + MIR SINE MIR 118 191 -71 449 229 0 53 chr18 4329928 4330059 -81658875 - MLT1I LTR MaLR -277 132 9 2379 62 0 36 chr18 4330105 4330412 -81658522 + AluY SINE Alu 1 296 -15 734 125 7 90 chr18 4330579 4330723 -81658211 - FLAM_C SINE Alu -1 132 1 210 266 47 0 chr18 4330881 4330945 -81657989 - L2 LINE L2 -49 3264 3198 346 225 175 0 chr18 4331397 4331517 -81657417 + MIR SINE MIR 121 261 -1 2455 163 39 0 chr18 4331674 4332084 -81656850 - MSTB LTR MaLR 0 426 1 333 0 0 0 chr18 4332704 4332741 -81656193 + (TG)n Simple_repeat Simple_repeat 1 37 0 26 0 0 0 chr18 4333530 4333556 -81655378 + AT_rich Low_complexity Low_complexity 1 26 0 1230 73 61 0 chr18 4333844 4334009 -81654925 + AluSg/x SINE Alu 134 308 -4 1319 225 111 70 chr18 4334478 4334556 -81654378 - MLT1D LTR MaLR 0 505 432 1655 172 8 0 chr18 4334556 4334823 -81654111 + AluJb SINE Alu 12 280 -32 1319 225 111 70 chr18 4334823 4335229 -81653705 - MLT1D LTR MaLR -73 432 1 2240 81 3 3 chr18 4335269 4335580 -81653354 - AluSx SINE Alu 0 311 1 2490 76 3 0 chr18 4335804 4336105 -81652829 - AluSp SINE Alu -11 302 1 318 286 11 11 chr18 4336689 4336780 -81652154 + L2 LINE L2 3182 3272 0 735 221 0 35 chr18 4336817 4336989 -81651945 - FRAM SINE Alu 0 166 1 2200 54 10 34 chr18 4337014 4337308 -81651626 + AluY SINE Alu 13 299 -12 677 234 29 35 chr18 4337323 4337494 -81651440 - MIR SINE MIR -46 216 47 2134 125 3 0 chr18 4337537 4337841 -81651093 - AluSx SINE Alu -7 305 1 188 315 18 63 chr18 4337883 4337994 -81650940 + MIR SINE MIR 154 259 -3 434 99 28 14 chr18 4338323 4338394 -81650540 + L1MB3 LINE L1 6081 6152 -31 21 71 0 0 chr18 4338691 4338733 -81650201 + AT_rich Low_complexity Low_complexity 1 42 0 1870 126 36 0 chr18 4338785 4339063 -81649871 + AluSx SINE Alu 1 288 -24 1825 185 0 10 chr18 4339318 4339626 -81649308 - AluJo SINE Alu -7 305 1 985 165 18 6 chr18 4339766 4339936 -81648998 + AluSg/x SINE Alu 130 301 -8 2182 230 119 68 chr18 4340084 4340245 -81648689 + L1MC4 LINE L1 6786 6937 -1105 1334 185 46 46 chr18 4340245 4340547 -81648387 + AluJo SINE Alu 1 302 -10 2182 230 119 68 chr18 4340547 4341377 -81647557 + L1MC4 LINE L1 6937 7827 -215 1215 52 0 0 chr18 4341427 4341581 -81647353 - L1PA4 LINE L1 -2 6153 6000 2116 168 38 18 chr18 4341730 4342173 -81646761 - LTR56 LTR ERV1 0 437 10 1312 186 42 52 chr18 4342174 4342480 -81646454 + AluJo SINE Alu 1 303 -9 2163 116 0 0 chr18 4342485 4342778 -81646156 - AluSc SINE Alu -16 293 1 2306 174 16 0 chr18 4343062 4343448 -81645486 - MER57A LTR ERV1 -11 392 1 252 118 15 29 chr18 4343589 4343602 -81645332 + (TA)n Simple_repeat Simple_repeat 2 14 -54 2114 99 7 7 chr18 4343602 4343884 -81645050 + AluSp SINE Alu 5 286 -27 252 118 15 29 chr18 4343884 4343938 -81644996 + (TA)n Simple_repeat Simple_repeat 14 68 0 211 70 23 23 chr18 4343966 4344009 -81644925 + (TA)n Simple_repeat Simple_repeat 2 44 0 211 70 23 23 chr18 4344037 4344080 -81644854 + (TA)n Simple_repeat Simple_repeat 1 43 0 1151 161 177 24 chr18 4344080 4344328 -81644606 - Tigger3(Golem) DNA MER2_type -2743 286 1 1042 256 16 3 chr18 4344587 4344892 -81644042 - L1MEc LINE L1 -3935 2461 2153 2025 131 0 17 chr18 4344917 4345214 -81643720 - AluSx SINE Alu -20 292 1 2327 119 0 0 chr18 4345274 4345586 -81643348 - AluSx SINE Alu 0 312 1 877 184 0 13 chr18 4345968 4346120 -81642814 + FRAM SINE Alu 1 150 -26 1996 112 7 0 chr18 4346497 4346774 -81642160 + AluSp SINE Alu 1 279 -34 657 78 0 11 chr18 4346997 4347087 -81641847 + AluY SINE Alu 2 90 -221 1842 118 0 27 chr18 4347187 4347449 -81641485 - AluSp SINE Alu -58 255 1 778 171 8 0 chr18 4347564 4347693 -81641241 + FLAM_A SINE Alu 1 130 -3 2197 134 0 3 chr18 4348813 4349126 -81639808 + AluSq SINE Alu 1 312 -1 39 15 0 46 chr18 4350305 4350370 -81638564 + AT_rich Low_complexity Low_complexity 1 62 0 1245 171 167 0 chr18 4350600 4350852 -81638082 - L1PB3 LINE L1 0 6154 5861 186 43 0 0 chr18 4351013 4351036 -81637898 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2331 100 3 0 chr18 4351056 4351357 -81637577 - AluSg SINE Alu -8 302 1 2037 136 13 7 chr18 4351367 4351675 -81637259 - AluSq SINE Alu -3 310 1 1168 56 17 17 chr18 4351685 4351865 -81637069 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2323 106 0 6 chr18 4351879 4352191 -81636743 - AluSg SINE Alu 0 310 1 284 151 86 178 chr18 4352194 4352346 -81636588 - HAL1 LINE L1 -261 2246 2109 1640 137 33 68 chr18 4352351 4352447 -81636487 + MLT1B LTR MaLR 1 99 -291 2331 89 0 0 chr18 4352447 4352772 -81636162 - AluSg SINE Alu 0 325 1 1912 153 3 10 chr18 4352778 4353086 -81635848 - AluJo SINE Alu -6 306 1 1640 137 33 68 chr18 4353086 4353288 -81635646 + MLT1B LTR MaLR 104 296 -94 189 0 0 0 chr18 4353295 4353316 -81635618 + (T)n Simple_repeat Simple_repeat 1 21 0 26 0 0 0 chr18 4353338 4353364 -81635570 + GC_rich Low_complexity Low_complexity 1 26 0 2071 115 0 14 chr18 4353935 4354223 -81634711 - AluJb SINE Alu -28 284 1 28 0 0 0 chr18 4354230 4354258 -81634676 + AT_rich Low_complexity Low_complexity 1 28 0 2140 131 0 3 chr18 4356821 4357119 -81631815 + AluSx SINE Alu 3 299 -13 1825 154 3 7 chr18 4357390 4357688 -81631246 - AluSg SINE Alu -13 297 1 371 251 74 0 chr18 4358216 4358342 -81630592 + MIR SINE MIR 13 143 -65 2269 102 0 7 chr18 4358362 4358657 -81630277 + AluSg SINE Alu 1 293 -17 2538 183 62 49 chr18 4358657 4358843 -81630091 - L1MCa LINE L1 -3189 3237 3055 1636 122 0 0 chr18 4358843 4359065 -81629869 + AluSq SINE Alu 77 298 -15 2538 183 62 49 chr18 4359065 4359360 -81629574 - L1MCa LINE L1 -3371 3055 2765 1958 124 37 0 chr18 4359360 4359656 -81629278 - AluSx SINE Alu 0 306 1 2538 183 62 49 chr18 4359656 4359989 -81628945 - L1MCa LINE L1 -3661 2765 2438 3689 93 14 0 chr18 4359989 4360496 -81628438 + MER75 DNA T2_type 1 514 0 2538 183 62 49 chr18 4360496 4360748 -81628186 - L1MCa LINE L1 -3988 2438 2191 2272 98 10 0 chr18 4360748 4361043 -81627891 - AluSg SINE Alu -12 298 1 2538 183 62 49 chr18 4361043 4361260 -81627674 - L1MCa LINE L1 -4235 2191 1934 2357 92 0 0 chr18 4361261 4361556 -81627378 + AluSg SINE Alu 1 295 -15 553 236 26 77 chr18 4361736 4361931 -81627003 + MIR SINE MIR 70 254 -8 311 285 13 60 chr18 4362483 4362634 -81626300 - LTR33A LTR ERVL -3 520 377 2190 115 7 0 chr18 4362756 4363051 -81625883 + AluSq SINE Alu 1 297 -16 2491 68 0 3 chr18 4363051 4363345 -81625589 + AluSp SINE Alu 1 293 -20 2353 60 3 3 chr18 4363445 4363730 -81625204 - AluY SINE Alu -25 286 2 1051 90 7 7 chr18 4363733 4363878 -81625056 + Tigger1 DNA MER2_type 1950 2094 -324 879 138 8 0 chr18 4363878 4364008 -81624926 + FLAM_C SINE Alu 1 131 -12 2114 108 63 18 chr18 4364021 4364354 -81624580 + Tigger1 DNA MER2_type 2071 2418 0 1244 98 0 6 chr18 4364649 4364812 -81624122 + AluSg/x SINE Alu 135 296 -14 653 219 126 0 chr18 4365474 4365625 -81623309 + FAM SINE Alu 1 170 -5 2385 136 20 17 chr18 4365651 4366057 -81622877 + L1MB1 LINE L1 5762 6168 0 810 127 0 0 chr18 4367192 4367302 -81621632 + FLAM_C SINE Alu 1 110 -33 498 276 126 0 chr18 4368557 4368771 -81620163 - MIR SINE MIR -1 261 21 23 0 0 0 chr18 4370515 4370538 -81618396 + AT_rich Low_complexity Low_complexity 1 23 0 2157 133 0 7 chr18 4370882 4371190 -81617744 + AluSx SINE Alu 1 306 -6 4335 196 59 81 chr18 4371192 4371519 -81617415 - Charlie1a DNA MER1_type -1420 1341 1008 1970 129 10 7 chr18 4371519 4371814 -81617120 - AluSx SINE Alu -16 296 1 4335 196 59 81 chr18 4371814 4372337 -81616597 - Charlie1a DNA MER1_type -1753 1008 475 1496 161 57 25 chr18 4372337 4372617 -81616317 + AluJo SINE Alu 1 289 -23 1773 115 3 61 chr18 4372620 4372933 -81616001 - AluSx SINE Alu -17 295 1 4335 196 59 81 chr18 4372933 4372945 -81615989 - Charlie1a DNA MER1_type -2288 473 462 2031 125 3 20 chr18 4372945 4373240 -81615694 - AluSc SINE Alu -19 290 1 4335 196 59 81 chr18 4373240 4373740 -81615194 - Charlie1a DNA MER1_type -2299 462 3 2138 134 0 0 chr18 4373793 4374092 -81614842 + AluSx SINE Alu 1 299 -13 1955 132 7 4 chr18 4374104 4374385 -81614549 + AluSx SINE Alu 4 285 -27 2071 115 0 14 chr18 4375177 4375465 -81613469 - AluJb SINE Alu -28 284 1 27 0 0 0 chr18 4375472 4375499 -81613435 + AT_rich Low_complexity Low_complexity 1 27 0 2137 131 0 3 chr18 4378045 4378343 -81610591 + AluSx SINE Alu 3 299 -13 1825 154 3 7 chr18 4378614 4378912 -81610022 - AluSg SINE Alu -13 297 1 371 251 74 0 chr18 4379457 4379583 -81609351 + MIR SINE MIR 13 143 -65 2228 106 0 7 chr18 4379603 4379906 -81609028 + AluSg SINE Alu 1 301 -9 1982 135 3 3 chr18 4379976 4380273 -81608661 + AluSx SINE Alu 1 297 -15 2403 68 0 14 chr18 4380310 4380605 -81608329 - AluY SINE Alu -20 291 1 275 300 77 39 chr18 4380770 4380918 -81608016 + L2 LINE L2 2948 3110 -203 957 177 13 78 chr18 4380918 4381150 -81607784 - MER20 DNA MER1_type 0 219 3 275 300 77 39 chr18 4381150 4381234 -81607700 + L2 LINE L2 3110 3189 -124 42 57 0 0 chr18 4381262 4381332 -81607602 + AT_rich Low_complexity Low_complexity 1 70 0 524 135 0 0 chr18 4381339 4381428 -81607506 + AluS SINE Alu 224 312 0 210 286 71 0 chr18 4381441 4381497 -81607437 + L2 LINE L2 3252 3311 -2 1437 77 72 0 chr18 4381513 4381734 -81607200 + L1PA14 LINE L1 5922 6158 -3 221 244 0 0 chr18 4382179 4382224 -81606710 + (CCA)n Simple_repeat Simple_repeat 3 47 0 25 31 0 0 chr18 4382462 4382494 -81606440 + AT_rich Low_complexity Low_complexity 1 32 0 195 42 0 0 chr18 4383638 4383662 -81605272 + (TCC)n Simple_repeat Simple_repeat 3 26 0 2194 113 3 0 chr18 4384649 4384940 -81603994 + AluSp SINE Alu 1 292 -21 476 151 0 0 chr18 4384941 4385014 -81603920 - L1MB3 LINE L1 -39 6144 6072 24 0 0 0 chr18 4385095 4385119 -81603815 + AT_rich Low_complexity Low_complexity 1 24 0 462 280 83 0 chr18 4385286 4385443 -81603491 - MIR SINE MIR -45 217 48 2001 139 3 0 chr18 4385505 4385792 -81603142 + AluSx SINE Alu 1 288 -24 338 272 0 22 chr18 4385795 4385887 -81603047 - L1MC4 LINE L1 -1339 6703 6614 204 83 56 0 chr18 4385887 4385923 -81603011 + (TCTA)n Simple_repeat Simple_repeat 2 39 0 333 275 0 11 chr18 4385923 4385980 -81602954 - L1MC4 LINE L1 -1339 6703 6646 960 111 0 0 chr18 4385980 4386160 -81602774 + (TA)n Simple_repeat Simple_repeat 1 180 0 333 275 0 11 chr18 4386160 4386193 -81602741 - L1MC4 LINE L1 -1396 6646 6614 2101 81 68 14 chr18 4386355 4386650 -81602284 + AluSq SINE Alu 1 311 -2 1317 153 0 28 chr18 4386756 4386972 -81601962 + AluJo SINE Alu 89 298 -14 2346 83 10 0 chr18 4386975 4387276 -81601658 + AluSc SINE Alu 1 304 -5 1817 112 93 4 chr18 4387819 4388087 -81600847 + AluSx SINE Alu 2 293 -19 2177 87 4 4 chr18 4388497 4388774 -81600160 + AluSq SINE Alu 1 277 -36 2408 87 3 0 chr18 4388774 4389083 -81599851 + AluSp SINE Alu 1 310 -3 2275 99 3 10 chr18 4389093 4389397 -81599537 + AluSg SINE Alu 1 302 -8 1189 183 167 0 chr18 4389601 4389853 -81599081 + L1PB3 LINE L1 5861 6154 0 39 15 0 46 chr18 4390087 4390152 -81598782 + AT_rich Low_complexity Low_complexity 1 62 0 2328 91 0 25 chr18 4391330 4391648 -81597286 - AluSg SINE Alu 0 310 1 258 333 63 0 chr18 4391865 4391976 -81596958 + MIR3 SINE MIR 77 194 -14 1954 125 0 60 chr18 4392218 4392537 -81596397 + AluSx SINE Alu 1 300 -12 1999 90 4 19 chr18 4392937 4393205 -81595729 - AluSp SINE Alu -49 264 1 2468 84 0 3 chr18 4393219 4393529 -81595405 - AluY SINE Alu -2 309 1 378 0 0 0 chr18 4393841 4393883 -81595051 + (CA)n Simple_repeat Simple_repeat 2 43 0 2008 130 0 11 chr18 4393965 4394249 -81594685 + AluSx SINE Alu 2 282 -30 1444 115 12 136 chr18 4394732 4395070 -81593864 - AluJb SINE Alu -4 298 3 806 156 0 25 chr18 4395651 4395811 -81593123 - L1MB3 LINE L1 0 6183 6028 414 226 0 0 chr18 4395811 4395895 -81593039 + AluJ/FRAM SINE Alu 214 297 -5 293 233 0 0 chr18 4395896 4395969 -81592965 - L1MB4 LINE L1 -150 6030 5958 799 158 14 0 chr18 4396003 4396142 -81592792 - L1MB4 LINE L1 -225 5955 5815 1985 147 0 19 chr18 4396196 4396509 -81592425 + AluSx SINE Alu 1 307 -5 2181 90 3 3 chr18 4396513 4396801 -81592133 + AluSp SINE Alu 1 288 -25 2145 196 39 63 chr18 4396820 4397418 -81591516 - L1MC4 LINE L1 -29 8013 7431 1799 177 0 29 chr18 4398556 4398866 -81590068 - AluJb SINE Alu -11 301 1 2528 65 0 10 chr18 4399645 4399952 -81588982 + AluY SINE Alu 1 304 -7 438 199 243 66 chr18 4399952 4400169 -81588765 + L1MC4a LINE L1 5322 5582 -2226 653 260 122 58 chr18 4400214 4400575 -81588359 + MLT1I LTR MaLR 11 394 -15 969 253 57 48 chr18 4400587 4400668 -81588266 + L1MC4a LINE L1 5613 5692 -2116 2321 77 0 7 chr18 4400668 4400983 -81587951 - AluSq SINE Alu 0 313 1 969 253 57 48 chr18 4400983 4401271 -81587663 + L1MC4a LINE L1 5692 5986 -1822 1398 129 33 0 chr18 4401367 4401577 -81587357 - AluJb SINE Alu -10 302 86 30 59 0 0 chr18 4401603 4401654 -81587280 + AT_rich Low_complexity Low_complexity 1 51 0 1817 161 38 0 chr18 4402384 4402675 -81586259 + AluJo SINE Alu 1 302 -10 23 33 0 0 chr18 4402830 4402860 -81586074 + AT_rich Low_complexity Low_complexity 1 30 0 2385 60 0 3 chr18 4402913 4403219 -81585715 + AluY SINE Alu 1 305 0 1980 112 7 24 chr18 4403239 4403549 -81585385 + AluSq SINE Alu 3 307 0 22 0 0 0 chr18 4403600 4403622 -81585312 + AT_rich Low_complexity Low_complexity 1 22 0 419 253 54 83 chr18 4403661 4403741 -81585193 - MIR SINE MIR -3 259 178 2252 105 3 0 chr18 4403741 4404035 -81584899 - AluSx SINE Alu -17 295 1 419 253 54 83 chr18 4404035 4404203 -81584731 - MIR SINE MIR -84 178 21 182 350 114 0 chr18 4405797 4405920 -81583014 - MIR SINE MIR -20 242 106 2059 141 3 3 chr18 4406307 4406611 -81582323 - AluSx SINE Alu -6 306 3 537 170 0 0 chr18 4406653 4406753 -81582181 + FLAM_A SINE Alu 42 141 -1 2141 107 7 0 chr18 4407056 4407345 -81581589 + AluSg SINE Alu 1 291 -19 2272 110 0 0 chr18 4407348 4407656 -81581278 + AluSc SINE Alu 1 308 -1 1570 114 20 143 chr18 4407781 4407960 -81580974 + AluYb8 SINE Alu 2 119 -189 2299 77 13 7 chr18 4407960 4408283 -81580651 + AluSx SINE Alu 1 312 0 1570 114 20 143 chr18 4408283 4408453 -81580481 + AluYb8 SINE Alu 119 308 0 1681 153 3 52 chr18 4408604 4408912 -81580022 - AluJo SINE Alu -19 293 1 2404 45 0 51 chr18 4413005 4413316 -81575618 - AluY SINE Alu -16 295 1 191 279 0 76 chr18 4413372 4413451 -81575483 + L2 LINE L2 3241 3313 0 684 266 105 4 chr18 4414083 4414312 -81574622 - MIR SINE MIR -7 255 4 27 62 0 0 chr18 4414437 4414485 -81574449 + AT_rich Low_complexity Low_complexity 1 48 0 2096 91 40 0 chr18 4414528 4414804 -81574130 + AluSp SINE Alu 1 287 -26 206 240 0 0 chr18 4416271 4416321 -81572613 + MIR SINE MIR 72 121 -141 1294 69 0 13 chr18 4417867 4418026 -81570908 + L1PA10 LINE L1 5999 6155 -13 456 290 74 11 chr18 4418068 4418244 -81570690 - MIR SINE MIR -29 233 47 203 59 0 29 chr18 4419378 4419412 -81569522 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 299 256 33 22 chr18 4419671 4419761 -81569173 + L3b LINE CR1 1315 1405 -178 297 301 0 21 chr18 4420412 4420505 -81568429 + MIR SINE MIR 168 258 -4 184 325 241 0 chr18 4420530 4420613 -81568321 - L2 LINE L2 -29 3243 3141 1653 135 38 0 chr18 4421339 4421576 -81567358 + AluSx SINE Alu 1 246 -66 20606 23 0 1 chr18 4422207 4425265 -81563669 - L1PA3 LINE L1 0 6155 3100 23 68 0 0 chr18 4425633 4425677 -81563257 + AT_rich Low_complexity Low_complexity 1 44 0 238 132 38 0 chr18 4425992 4426045 -81562889 + (TG)n Simple_repeat Simple_repeat 2 56 0 295 287 96 11 chr18 4426053 4426147 -81562787 - MIR SINE MIR -73 135 34 478 214 39 79 chr18 4426414 4426474 -81562460 - MIR SINE MIR 0 262 201 2068 122 0 20 chr18 4426474 4426769 -81562165 + AluSg SINE Alu 1 289 -21 478 214 39 79 chr18 4426769 4426886 -81562048 - MIR SINE MIR -61 201 92 233 275 53 38 chr18 4427395 4427526 -81561408 + L1ME3A LINE L1 5478 5610 -552 980 151 0 0 chr18 4427580 4427726 -81561208 + FRAM SINE Alu 1 146 -30 258 32 0 0 chr18 4427728 4427759 -81561175 + (GA)n Simple_repeat Simple_repeat 2 32 0 757 295 58 74 chr18 4427777 4428329 -81560605 + HAL1b LINE L1 98 640 -708 513 129 0 35 chr18 4428348 4428433 -81560501 - Tigger5 DNA MER2_type 0 2323 2242 * 1255 209 67 39 chr18 4428415 4428698 -81560236 - Tigger5 DNA MER2_type -2013 310 20 243 281 74 25 chr18 4428700 4428821 -81560113 + HAL1b LINE L1 691 817 -531 2580 213 58 60 chr18 4429072 4429885 -81559049 + L1MC5 LINE L1 6633 7443 -518 424 255 42 61 chr18 4430040 4430252 -81558682 + L1ME3A LINE L1 5962 6169 -1 1529 173 53 7 chr18 4430288 4430572 -81558362 + AluJb SINE Alu 1 297 -15 257 226 12 0 chr18 4430786 4430870 -81558064 + (TA)n Simple_repeat Simple_repeat 2 86 0 491 204 166 62 chr18 4430879 4431090 -81557844 - L1MC4 LINE L1 0 8042 7810 23 33 0 0 chr18 4431674 4431704 -81557230 + AT_rich Low_complexity Low_complexity 1 30 0 880 183 6 0 chr18 4431717 4431881 -81557053 - AluJb SINE Alu -4 308 144 1058 90 0 0 chr18 4432287 4432420 -81556514 + AluSq/x SINE Alu 1 133 -180 258 32 0 0 chr18 4433664 4433695 -81555239 + (TA)n Simple_repeat Simple_repeat 1 31 0 25 0 0 0 chr18 4433997 4434022 -81554912 + AT_rich Low_complexity Low_complexity 1 25 0 598 207 7 15 chr18 4434783 4434918 -81554016 + MER53 DNA DNA 9 142 -47 180 0 0 0 chr18 4435521 4435541 -81553393 + (TC)n Simple_repeat Simple_repeat 1 20 0 989 139 24 36 chr18 4437077 4437242 -81551692 - AluJo/FRAM SINE Alu -16 296 134 2010 125 28 3 chr18 4437242 4437530 -81551404 - AluSx SINE Alu -13 299 5 1564 187 0 32 chr18 4437671 4437949 -81550985 - AluJb SINE Alu -39 273 5 236 262 134 81 chr18 4438634 4438684 -81550250 - MIR3 SINE MIR -8 200 154 638 217 12 133 chr18 4438684 4438933 -81550001 + MER58A DNA MER1_type 2 220 -4 236 262 134 81 chr18 4438933 4439031 -81549903 - MIR3 SINE MIR -54 154 44 219 272 136 0 chr18 4439053 4439134 -81549800 + MIR SINE MIR 53 144 -118 401 289 53 32 chr18 4440011 4440198 -81548736 - MIR SINE MIR -1 261 71 1356 173 43 63 chr18 4440928 4441228 -81547706 - AluJo SINE Alu -18 294 1 706 198 261 20 chr18 4442246 4442411 -81546523 - L1MD2 LINE L1 -1 6358 6234 2315 86 30 0 chr18 4442411 4442713 -81546221 - AluY SINE Alu 0 311 1 706 198 261 20 chr18 4442713 4442800 -81546134 - L1MD2 LINE L1 -125 6234 6045 * 971 192 75 0 chr18 4442796 4443010 -81545924 - L1MDa LINE L1 -4230 2310 2081 326 131 0 131 chr18 4443018 4443048 -81545886 - L1MDa LINE L1 -4935 1605 1573 2460 82 0 0 chr18 4443048 4443353 -81545581 - AluSq SINE Alu -8 305 1 326 131 0 131 chr18 4443353 4443421 -81545513 - L1MDa LINE L1 -4967 1573 1520 1189 82 0 0 chr18 4443672 4443818 -81545116 - AluSg1 SINE Alu -163 146 1 207 0 0 0 chr18 4444934 4444957 -81543977 + (A)n Simple_repeat Simple_repeat 1 23 0 852 149 8 0 chr18 4445016 4445150 -81543784 - AluJo SINE Alu -177 135 1 423 260 82 0 chr18 4445309 4445455 -81543479 + L1ME4a LINE L1 5964 6121 0 1604 173 52 4 chr18 4445458 4445730 -81543204 - AluJo SINE Alu -27 285 1 22 56 0 0 chr18 4445970 4446006 -81542928 + AT_rich Low_complexity Low_complexity 1 36 0 2156 85 41 10 chr18 4447062 4447357 -81541577 + AluSx SINE Alu 3 306 -6 1932 157 6 6 chr18 4450129 4450441 -81538493 - AluJb SINE Alu 0 312 1 398 308 238 20 chr18 4451128 4451469 -81537465 + L2 LINE L2 2899 3313 0 311 204 380 0 chr18 4452853 4452995 -81535939 + L2 LINE L2 3117 3312 -1 2060 142 0 3 chr18 4453719 4454015 -81534919 + AluSx SINE Alu 1 295 -17 2216 111 0 19 chr18 4454399 4454706 -81534228 - AluSx SINE Alu -7 305 5 1965 112 3 60 chr18 4455729 4456043 -81532891 + AluSx SINE Alu 2 297 -15 2256 88 0 0 chr18 4456067 4456373 -81532561 + AluSx SINE Alu 1 306 0 2333 84 3 23 chr18 4457425 4457735 -81531199 - AluSx SINE Alu -8 304 1 218 217 0 0 chr18 4458340 4458386 -81530548 + A-rich Low_complexity Low_complexity 1 46 0 1810 112 88 0 chr18 4459707 4459967 -81528967 + AluSq SINE Alu 14 296 -17 26 0 0 0 chr18 4459967 4459993 -81528941 + AT_rich Low_complexity Low_complexity 1 26 0 1571 178 4 7 chr18 4460843 4461112 -81527822 + AluJo SINE Alu 1 268 -44 2305 95 0 19 chr18 4461114 4461431 -81527503 + AluY SINE Alu 1 311 0 32235 107 20 57 chr18 4461445 4466779 -81522155 + L1PA7 LINE L1 12 5066 -1088 2345 93 0 16 chr18 4466779 4467092 -81521842 + AluY SINE Alu 1 308 -3 32235 107 20 57 chr18 4467092 4468139 -81520795 + L1PA7 LINE L1 5066 6150 -4 1655 149 17 43 chr18 4468627 4468929 -81520005 + AluJo SINE Alu 1 294 -18 1846 160 0 25 chr18 4470073 4470392 -81518542 - AluJb SINE Alu -1 311 1 1817 134 80 0 chr18 4470579 4470855 -81518079 - AluSx SINE Alu -14 298 1 1653 157 53 0 chr18 4471645 4471926 -81517008 + AluJo SINE Alu 11 306 -6 416 284 0 0 chr18 4472129 4472231 -81516703 - MER103 DNA DNA -47 119 18 486 0 0 0 chr18 4473352 4473406 -81515528 + (TG)n Simple_repeat Simple_repeat 2 55 0 2392 82 0 13 chr18 4473810 4474113 -81514821 + AluSx SINE Alu 1 299 -13 718 280 160 12 chr18 4474365 4474765 -81514169 - Charlie7 DNA MER1_type -1889 723 265 2092 178 98 17 chr18 4474765 4475232 -81513702 - MLT1D LTR MaLR 0 505 1 2059 127 7 10 chr18 4475822 4476129 -81512805 - AluSx SINE Alu -6 306 1 727 172 22 15 chr18 4476277 4476411 -81512523 + AluJo SINE Alu 2 136 -176 2609 58 0 10 chr18 4476429 4476741 -81512193 - AluY SINE Alu -2 309 1 1809 167 0 55 chr18 4477521 4477851 -81511083 + AluJb SINE Alu 1 312 0 2273 113 3 3 chr18 4478865 4479174 -81509760 + AluSg SINE Alu 1 309 -1 313 322 98 0 chr18 4479308 4479451 -81509483 - MIR3 SINE MIR -15 193 37 2689 110 2 116 chr18 4479590 4479874 -81509060 - MSTA LTR MaLR 0 428 220 2234 104 43 0 chr18 4479874 4480173 -81508761 - AluSx SINE Alu 0 312 1 2689 110 2 116 chr18 4480173 4480369 -81508565 - MSTA LTR MaLR -208 220 3 2529 68 0 6 chr18 4481204 4481515 -81507419 - AluY SINE Alu -2 309 1 884 147 0 22 chr18 4482035 4482171 -81506763 + FLAM_C SINE Alu 1 133 0 819 150 8 8 chr18 4482231 4482364 -81506570 - FLAM_C SINE Alu 0 133 1 821 157 0 0 chr18 4482890 4483011 -81505923 + FLAM_A SINE Alu 1 121 -12 245 337 55 12 chr18 4483594 4483757 -81505177 - L2 LINE L2 -213 3059 2890 2322 110 0 0 chr18 4483759 4484059 -81504875 + AluSx SINE Alu 1 300 -12 2462 95 0 0 chr18 4484063 4484368 -81504566 + AluSx SINE Alu 3 307 -5 628 236 29 72 chr18 4485459 4485475 -81503459 - MER63A DNA MER1_type -1489 199 184 3288 121 70 79 chr18 4485475 4486093 -81502841 - LTR9 LTR ERV1 0 612 1 628 236 29 72 chr18 4486093 4486284 -81502650 - MER63A DNA MER1_type -1504 184 1 201 306 65 28 chr18 4486489 4486597 -81502337 + MIR SINE MIR 27 138 -124 2068 122 3 14 chr18 4486646 4486940 -81501994 + AluSx SINE Alu 1 291 -21 459 300 6 12 chr18 4486991 4487329 -81501605 + (TGG)n Simple_repeat Simple_repeat 1 336 0 22 0 0 0 chr18 4487333 4487355 -81501579 + AT_rich Low_complexity Low_complexity 1 22 0 1678 199 0 3 chr18 4487356 4487638 -81501296 - AluJo SINE Alu -31 281 1 306 50 0 0 chr18 4487656 4487696 -81501238 + (TA)n Simple_repeat Simple_repeat 2 41 0 770 145 0 0 chr18 4487698 4487815 -81501119 - FLAM_C SINE Alu -15 118 2 2253 111 3 0 chr18 4487843 4488140 -81500794 + AluSq SINE Alu 1 298 -15 2195 91 11 0 chr18 4488140 4488427 -81500507 + AluSx SINE Alu 1 290 -22 2348 97 3 0 chr18 4489376 4489684 -81499250 - AluSp SINE Alu -4 309 1 351 0 0 0 chr18 4489739 4489778 -81499156 + (TG)n Simple_repeat Simple_repeat 2 40 0 506 263 62 6 chr18 4490015 4490175 -81498759 - L2 LINE L2 -501 2813 2645 335 276 51 0 chr18 4490491 4490589 -81498345 - L2 LINE L2 -1 3271 3169 189 0 0 0 chr18 4491861 4491882 -81497052 + (TTTTG)n Simple_repeat Simple_repeat 4 24 0 3416 151 62 74 chr18 4491915 4492710 -81496224 - LTR1 LTR ERV1 0 785 1 1862 112 51 7 chr18 4492968 4493263 -81495671 - AluSx SINE Alu 0 312 1 1357 117 5 42 chr18 4493442 4493655 -81495279 + AluJo SINE Alu 85 289 -23 213 94 0 0 chr18 4493658 4493690 -81495244 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 259 267 101 15 chr18 4493962 4494141 -81494793 - MER34B LTR ERV1 -384 260 10 303 316 51 0 chr18 4494536 4494634 -81494300 - MIR SINE MIR -105 157 55 1826 128 4 4 chr18 4494639 4494897 -81494037 + AluSx SINE Alu 40 297 -15 1638 142 15 80 chr18 4494912 4495236 -81493698 + AluJo SINE Alu 3 305 -7 425 268 7 33 chr18 4497136 4497289 -81491645 - L2 LINE L2 -1 3312 3164 589 232 32 0 chr18 4497557 4497682 -81491252 - MLT1H1 LTR MaLR -7 548 420 1871 199 98 12 chr18 4497700 4497737 -81491197 - MLT2B1 LTR ERVL 0 554 522 435 19 0 0 chr18 4497737 4497789 -81491145 + (TG)n Simple_repeat Simple_repeat 2 53 0 1871 199 98 12 chr18 4497789 4498199 -81490735 - MLT2B1 LTR ERVL -32 522 1 1044 239 56 66 chr18 4498199 4498574 -81490360 - MLT1H1 LTR MaLR -177 378 8 2118 119 10 3 chr18 4498688 4498982 -81489952 - AluSx SINE Alu -16 296 1 216 0 0 0 chr18 4499723 4499747 -81489187 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 33 0 0 0 chr18 4499852 4499885 -81489049 + AT_rich Low_complexity Low_complexity 1 33 0 343 290 49 27 chr18 4499886 4500069 -81488865 - MLT1-int LTR MaLR -899 472 286 2174 107 7 19 chr18 4500090 4500400 -81488534 + AluSq SINE Alu 1 306 -7 985 234 95 7 chr18 4500438 4500712 -81488222 - MLT1H1 LTR MaLR -250 305 8 615 236 16 0 chr18 4500776 4500899 -81488035 + FLAM_A SINE Alu 2 126 -7 465 276 20 54 chr18 4501456 4501659 -81487275 - L2 LINE L2 -5 3308 3113 574 218 0 0 chr18 4501664 4501774 -81487160 + FLAM_A SINE Alu 1 110 -32 182 91 30 0 chr18 4501793 4501826 -81487108 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 258 343 48 32 chr18 4501857 4502105 -81486829 - L2 LINE L2 -245 3068 2817 2394 82 0 3 chr18 4502108 4502411 -81486523 + AluSc SINE Alu 1 302 -7 333 100 0 0 chr18 4502537 4502587 -81486347 + (TG)n Simple_repeat Simple_repeat 2 51 0 1265 193 120 4 chr18 4503575 4503849 -81485085 - MER63 DNA MER1_type 0 1061 756 964 193 29 55 chr18 4504012 4504064 -81484870 - MER63 DNA MER1_type -829 232 180 2682 26 0 7 chr18 4504064 4504367 -81484567 + AluY SINE Alu 1 301 -10 964 193 29 55 chr18 4504367 4504552 -81484382 - MER63 DNA MER1_type -881 180 1 2316 74 0 45 chr18 4504922 4505231 -81483703 + AluY SINE Alu 1 295 -16 1637 159 3 55 chr18 4509320 4509629 -81479305 + AluJo SINE Alu 1 293 -19 1570 114 20 143 chr18 4509781 4509951 -81478983 - AluYb8 SINE Alu 0 308 201 2306 74 13 7 chr18 4509951 4510274 -81478660 - AluSx SINE Alu 0 312 1 1570 114 20 143 chr18 4510274 4510453 -81478481 - AluYb8 SINE Alu -107 201 2 2294 107 0 0 chr18 4510578 4510886 -81478048 - AluSc SINE Alu -1 308 1 2155 104 7 0 chr18 4510889 4511178 -81477756 - AluSg SINE Alu -19 291 1 537 170 0 0 chr18 4511481 4511581 -81477353 - FLAM_A SINE Alu -1 141 42 2059 141 3 3 chr18 4511623 4511927 -81477007 + AluSx SINE Alu 3 306 -6 182 350 114 0 chr18 4512314 4512437 -81476497 + MIR SINE MIR 106 242 -20 419 250 55 86 chr18 4514061 4514200 -81474734 + MIR SINE MIR 47 178 -84 2248 105 3 0 chr18 4514200 4514494 -81474440 + AluSx SINE Alu 1 295 -17 419 250 55 86 chr18 4514494 4514574 -81474360 + MIR SINE MIR 178 259 -3 22 0 0 0 chr18 4514613 4514635 -81474299 + AT_rich Low_complexity Low_complexity 1 22 0 1979 112 7 24 chr18 4514686 4514996 -81473938 - AluSq SINE Alu 0 307 3 2384 60 0 3 chr18 4515016 4515322 -81473612 - AluY SINE Alu 0 305 1 23 33 0 0 chr18 4515375 4515405 -81473529 + AT_rich Low_complexity Low_complexity 1 30 0 1817 161 38 0 chr18 4515560 4515851 -81473083 - AluJo SINE Alu -10 302 1 30 59 0 0 chr18 4516581 4516632 -81472302 + AT_rich Low_complexity Low_complexity 1 51 0 1368 133 33 0 chr18 4516658 4516868 -81472066 + AluJb SINE Alu 86 302 -10 946 251 60 49 chr18 4516964 4517251 -81471683 - L1MC4a LINE L1 -1822 5986 5692 2322 77 0 7 chr18 4517251 4517566 -81471368 + AluSq SINE Alu 1 313 0 946 251 60 49 chr18 4517566 4517647 -81471287 - L1MC4a LINE L1 -2116 5692 5613 653 260 122 58 chr18 4517659 4518020 -81470914 - MLT1I LTR MaLR -15 394 11 435 217 210 80 chr18 4518065 4518282 -81470652 - L1MC4a LINE L1 -2226 5582 5318 2651 56 0 0 chr18 4518282 4518586 -81470348 - AluY SINE Alu -7 304 1 435 217 210 80 chr18 4518586 4518654 -81470280 - L1MC4a LINE L1 -2490 5318 5260 272 91 23 0 chr18 4518681 4518725 -81470209 + (TTTC)n Simple_repeat Simple_repeat 4 48 0 1265 261 60 24 chr18 4518725 4519142 -81469792 - L1MC4a LINE L1 -1860 5948 5517 356 313 66 56 chr18 4519216 4519414 -81469520 - MIR SINE MIR -3 259 60 1396 152 8 13 chr18 4519550 4519787 -81469147 + MER46A DNA MER2_type 1 236 0 381 75 0 0 chr18 4520340 4520393 -81468541 + (TG)n Simple_repeat Simple_repeat 2 54 0 2120 86 38 0 chr18 4520406 4520698 -81468236 - AluSp SINE Alu -10 303 1 27 62 0 0 chr18 4520741 4520789 -81468145 + AT_rich Low_complexity Low_complexity 1 48 0 774 266 105 4 chr18 4520914 4521143 -81467791 + MIR SINE MIR 4 255 -7 211 269 87 67 chr18 4521775 4521879 -81467055 - L2 LINE L2 0 3313 3208 2583 36 0 0 chr18 4521910 4522216 -81466718 + AluY SINE Alu 1 306 -5 2075 96 11 0 chr18 4522566 4522898 -81466036 - AluSq SINE Alu 0 335 1 1671 172 0 10 chr18 4523433 4523724 -81465210 + AluJo SINE Alu 13 300 -12 2407 53 0 3 chr18 4523725 4524027 -81464907 + AluY SINE Alu 1 301 -10 1689 168 0 32 chr18 4524208 4524517 -81464417 - AluJb SINE Alu -13 299 1 2120 112 0 0 chr18 4524946 4525241 -81463693 + AluSc SINE Alu 1 295 -14 1941 132 7 13 chr18 4525252 4525556 -81463378 + AluSx SINE Alu 1 302 -10 270 291 143 11 chr18 4525743 4525932 -81463002 - L2 LINE L2 -223 3049 2836 2359 39 0 29 chr18 4526529 4526835 -81462099 + AluY SINE Alu 1 297 -14 269 271 77 44 chr18 4527857 4528130 -81460804 - L1ME4a LINE L1 -116 6005 5724 2107 102 0 23 chr18 4528548 4528852 -81460082 - AluSc SINE Alu -12 297 1 317 331 85 99 chr18 4528887 4529180 -81459754 + L1ME3A LINE L1 274 562 -5557 2187 92 0 7 chr18 4529369 4529675 -81459259 + AluSq SINE Alu 5 308 -5 1468 166 66 3 chr18 4529893 4530182 -81458752 + AluJb SINE Alu 1 307 -5 1792 168 3 0 chr18 4530196 4530494 -81458440 - AluJb SINE Alu -5 307 9 1987 131 0 10 chr18 4530684 4530996 -81457938 + AluSx SINE Alu 1 309 -3 583 296 90 38 chr18 4531007 4531410 -81457524 + L1ME3A LINE L1 4516 4949 -1180 2054 215 23 43 chr18 4531410 4531941 -81456993 - MLT2B1 LTR ERVL 0 520 1 583 296 90 38 chr18 4531941 4532017 -81456917 + L1ME3A LINE L1 4949 5020 -1109 280 257 22 5 chr18 4532122 4532245 -81456689 + L1ME3A LINE L1 5330 5456 -697 2336 42 0 3 chr18 4532246 4532578 -81456356 - AluY SINE Alu 0 331 1 758 173 0 8 chr18 4532580 4532707 -81456227 - AluJ SINE Alu -6 306 181 623 147 174 0 chr18 4532709 4532818 -81456116 - AluJ SINE Alu -174 128 1 679 259 112 48 chr18 4532822 4533285 -81455649 + L1ME3A LINE L1 5453 5945 -208 1977 142 7 0 chr18 4533480 4533782 -81455152 + AluSx SINE Alu 1 304 -8 2204 80 10 3 chr18 4533792 4534092 -81454842 + AluSx SINE Alu 1 302 -10 264 167 0 0 chr18 4534092 4534140 -81454794 + GA-rich Low_complexity Low_complexity 1 48 0 818 186 0 0 chr18 4534166 4534295 -81454639 + FRAM SINE Alu 24 152 -24 911 124 0 16 chr18 4534728 4534857 -81454077 + FLAM_C SINE Alu 1 127 -6 581 205 0 26 chr18 4534919 4535036 -81453898 - L1MB8 LINE L1 -1 6177 6064 1986 122 27 3 chr18 4535049 4535344 -81453590 - AluSx SINE Alu -10 302 1 1778 158 7 10 chr18 4535344 4535646 -81453288 - AluJb SINE Alu 0 312 11 1823 141 17 0 chr18 4535656 4535954 -81452980 - AluJb SINE Alu -9 303 1 2205 77 37 0 chr18 4538164 4538461 -81450473 - AluSx SINE Alu -4 308 1 526 294 47 6 chr18 4538674 4538844 -81450090 - MIR SINE MIR -17 245 69 2220 103 3 0 chr18 4538863 4539173 -81449761 + AluSx SINE Alu 1 311 -1 2247 84 0 3 chr18 4539562 4539859 -81449075 + AluY SINE Alu 1 296 -15 1290 161 8 46 chr18 4539990 4540178 -81448756 - AluJb SINE Alu -19 293 116 2611 130 20 10 chr18 4540178 4540577 -81448357 - MER57A LTR ERV1 0 403 1 1290 161 8 46 chr18 4540577 4540648 -81448286 - AluJb SINE Alu -196 116 44 330 163 0 0 chr18 4540799 4540848 -81448086 - AluJb SINE Alu -253 49 1 757 204 60 0 chr18 4540871 4541038 -81447896 - MER5A DNA MER1_type -12 177 1 2140 98 0 0 chr18 4541111 4541423 -81447511 + AluSq SINE Alu 1 312 0 1850 188 81 77 chr18 4541473 4541967 -81446967 - MLT1D LTR MaLR -8 497 2 1011 185 12 0 chr18 4541988 4542161 -81446773 + FAM SINE Alu 1 175 0 192 77 0 0 chr18 4542208 4542234 -81446700 + (A)n Simple_repeat Simple_repeat 1 26 0 1854 138 68 50 chr18 4542741 4543016 -81445918 - MLT1B LTR MaLR 0 390 105 2334 61 0 3 chr18 4543016 4543311 -81445623 - AluY SINE Alu -17 294 1 1854 138 68 50 chr18 4543311 4543418 -81445516 - MLT1B LTR MaLR -285 105 1 2198 78 0 23 chr18 4543549 4543855 -81445079 + AluY SINE Alu 1 299 -12 209 33 33 0 chr18 4543883 4543913 -81445021 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2197 91 0 0 chr18 4543915 4544201 -81444733 - AluSg SINE Alu -24 286 1 822 157 18 72 chr18 4544771 4544796 -81444138 + Tigger1 DNA MER2_type 1 26 -2392 2068 98 0 7 chr18 4544796 4545104 -81443830 - AluSq SINE Alu 0 307 2 822 157 18 72 chr18 4545104 4545243 -81443691 + Tigger1 DNA MER2_type 26 157 -2261 2076 102 31 3 chr18 4545250 4545543 -81443391 - AluSq SINE Alu -12 301 1 230 232 29 43 chr18 4545566 4545635 -81443299 + MIR SINE MIR 16 83 -125 631 253 49 58 chr18 4545649 4546068 -81442866 - MLT1F LTR MaLR -9 533 93 1941 125 3 16 chr18 4546081 4546392 -81442542 - AluJb SINE Alu -5 307 1 327 329 79 0 chr18 4546483 4546623 -81442311 + MER58B DNA MER1_type 191 341 0 367 186 0 0 chr18 4546627 4546686 -81442248 - MLT1F LTR MaLR -533 62 4 2176 110 0 3 chr18 4547639 4547949 -81440985 + AluSx SINE Alu 2 310 -2 1793 92 11 49 chr18 4547994 4548278 -81440656 - AluSp SINE Alu -12 301 29 2060 96 14 0 chr18 4548648 4548939 -81439995 + AluSq SINE Alu 1 295 -18 232 196 103 62 chr18 4549009 4549106 -81439828 - MIR SINE MIR -50 212 112 1513 142 24 24 chr18 4549245 4549533 -81439401 + AluJo SINE Alu 14 301 -11 2059 95 20 10 chr18 4549730 4550025 -81438909 + AluSq SINE Alu 1 298 -15 406 292 15 51 chr18 4550465 4550660 -81438274 - MIR SINE MIR -26 236 49 635 185 0 0 chr18 4550674 4550782 -81438152 - FLAM_A SINE Alu -23 119 12 998 122 7 0 chr18 4551724 4551871 -81437063 - FRAM SINE Alu -18 158 11 1702 146 13 27 chr18 4552014 4552315 -81436619 - AluSx SINE Alu -15 297 1 1736 142 137 57 chr18 4552320 4552721 -81436213 - LTR49 LTR ERV1 -160 435 3 2350 82 0 22 chr18 4552773 4553092 -81435842 - AluSq SINE Alu -1 312 1 431 279 81 12 chr18 4553197 4553358 -81435576 - MIR SINE MIR -47 215 44 514 231 15 15 chr18 4553386 4553520 -81435414 - MER39 LTR ERV1 -20 687 554 1152 149 0 16 chr18 4553523 4553711 -81435223 + AluJo SINE Alu 3 187 -125 2016 105 31 0 chr18 4553739 4554025 -81434909 + AluSx SINE Alu 1 295 -17 627 168 199 37 chr18 4554068 4554229 -81434705 - MER39 LTR ERV1 -237 470 284 290 205 51 51 chr18 4554231 4554309 -81434625 - LTR48B LTR ERV1 -566 78 1 410 265 59 53 chr18 4554500 4554531 -81434403 - MLT1L LTR MaLR -175 440 411 1885 119 35 0 chr18 4554531 4554817 -81434117 - AluSp SINE Alu -17 296 1 410 265 59 53 chr18 4554817 4555155 -81433779 - MLT1L LTR MaLR -204 411 2 1307 161 157 4 chr18 4555409 4555676 -81433258 + AluJo SINE Alu 1 308 -4 1956 93 35 14 chr18 4555734 4556024 -81432910 + AluSq SINE Alu 1 296 -17 294 212 50 10 chr18 4556085 4556184 -81432750 - L1ME4a LINE L1 -2 6119 6017 280 180 8 0 chr18 4557037 4557093 -81431841 + MIR SINE MIR 57 117 -91 242 217 98 98 chr18 4557106 4557198 -81431736 - MIR3 SINE MIR -14 194 103 426 224 138 78 chr18 4557888 4558120 -81430814 + MER112 DNA MER1_type 9 254 -6 255 103 0 0 chr18 4558384 4558423 -81430511 + (TG)n Simple_repeat Simple_repeat 2 40 0 2496 39 3 0 chr18 4560238 4560548 -81428386 - AluY SINE Alu 0 311 1 1066 94 0 0 chr18 4560826 4561002 -81427932 - AluSg/x SINE Alu 0 307 132 2163 110 0 7 chr18 4561002 4561311 -81427623 - AluSx SINE Alu -5 307 1 216 0 0 0 chr18 4561408 4561432 -81427502 + (CA)n Simple_repeat Simple_repeat 2 25 0 1951 132 3 0 chr18 4561486 4561773 -81427161 + AluSx SINE Alu 1 288 -24 393 272 0 22 chr18 4561776 4561868 -81427066 - L1MC4 LINE L1 -1339 6703 6614 392 286 32 16 chr18 4561872 4561999 -81426935 - L1MC4 LINE L1 -1140 6645 6538 918 117 0 0 chr18 4561999 4562178 -81426756 + (TA)n Simple_repeat Simple_repeat 1 179 0 392 286 32 16 chr18 4562178 4562205 -81426729 - L1MC4 LINE L1 -1247 6538 6513 322 255 108 10 chr18 4562206 4562308 -81426626 - L1MC4 LINE L1 -1339 6703 6592 1984 81 68 14 chr18 4562384 4562679 -81426255 + AluSq SINE Alu 1 311 -2 1265 148 0 28 chr18 4562785 4563001 -81425933 + AluJo SINE Alu 89 298 -14 2221 83 10 0 chr18 4563003 4563304 -81425630 + AluSc SINE Alu 1 304 -5 211 267 139 0 chr18 4563594 4563680 -81425254 + MIR SINE MIR 117 214 -48 1706 112 93 4 chr18 4563847 4564115 -81424819 + AluSx SINE Alu 2 293 -19 2102 116 0 0 chr18 4564152 4564455 -81424479 + AluSx SINE Alu 1 303 -9 1951 105 7 24 chr18 4564557 4564852 -81424082 - AluSc SINE Alu -19 290 1 224 330 73 9 chr18 4566214 4566323 -81422611 - L2 LINE L2 -5 3308 3193 2125 118 0 0 chr18 4566461 4566765 -81422169 + AluSx SINE Alu 1 304 -8 213 39 0 0 chr18 4568554 4568580 -81420354 + (GGGA)n Simple_repeat Simple_repeat 1 26 0 312 284 60 17 chr18 4569835 4569951 -81418983 + MIR3 SINE MIR 34 154 -54 303 257 69 0 chr18 4569967 4570068 -81418866 - L1M4 LINE L1 -2960 3186 3079 2001 148 0 16 chr18 4569978 4570352 -81418582 - AluJb SINE Alu 0 369 1 316 349 143 16 chr18 4570865 4571180 -81417754 - L3 LINE CR1 -23 1554 1200 1381 154 60 82 chr18 4571184 4571503 -81417431 - AluJb SINE Alu 0 312 1 853 212 101 42 chr18 4571779 4571928 -81417006 - MER5C DNA MER1_type 0 324 185 216 0 0 0 chr18 4571928 4571952 -81416982 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 853 212 101 42 chr18 4571952 4572015 -81416919 - MER5C DNA MER1_type -139 185 127 2068 115 0 59 chr18 4572015 4572336 -81416598 - AluSq SINE Alu -11 302 1 853 212 101 42 chr18 4572336 4572428 -81416506 - MER5C DNA MER1_type -197 127 1 678 224 28 65 chr18 4572441 4572655 -81416279 + MER63A DNA MER1_type 5 210 0 2101 131 3 0 chr18 4572699 4572996 -81415938 + AluSq SINE Alu 1 298 -15 29 47 0 0 chr18 4573314 4573357 -81415577 + AT_rich Low_complexity Low_complexity 1 43 0 2155 127 3 19 chr18 4573693 4574008 -81414926 - AluSx SINE Alu -2 310 1 2455 87 0 3 chr18 4574100 4574410 -81414524 - AluSc SINE Alu 0 309 1 2359 85 3 0 chr18 4574437 4574732 -81414202 - AluSp SINE Alu -17 296 1 1715 74 283 179 chr18 4575022 4575496 -81413438 - LTR12 LTR ERV1 -133 581 59 277 211 0 0 chr18 4575498 4575550 -81413384 - LTR30 LTR ERV1 -670 52 1 2146 107 21 0 chr18 4575556 4575847 -81413087 + AluSq SINE Alu 2 298 -15 560 221 8 30 chr18 4576287 4576418 -81412516 + FLAM_A SINE Alu 1 128 -14 744 178 0 30 chr18 4577112 4577247 -81411687 - FLAM_C SINE Alu -11 132 2 1834 149 7 24 chr18 4577852 4578148 -81410786 + AluJo SINE Alu 1 291 -21 2167 118 0 0 chr18 4578955 4579244 -81409690 - AluSx SINE Alu -23 289 1 454 263 10 7 chr18 4579462 4579765 -81409169 + GA-rich Low_complexity Low_complexity 1 304 0 300 51 0 0 chr18 4579802 4579841 -81409093 + Alu SINE Alu 1 39 -263 477 119 12 36 chr18 4579888 4579972 -81408962 + FLAM_C SINE Alu 37 118 -25 467 172 20 0 chr18 4579992 4580091 -81408843 + GA-rich Low_complexity Low_complexity 4 104 0 221 244 0 0 chr18 4580932 4580977 -81407957 + (CCA)n Simple_repeat Simple_repeat 3 47 0 183 80 0 0 chr18 4581220 4581245 -81407689 + (T)n Simple_repeat Simple_repeat 1 25 0 195 42 0 0 chr18 4582389 4582413 -81406521 + (TCC)n Simple_repeat Simple_repeat 3 26 0 2194 113 3 0 chr18 4583400 4583691 -81405243 + AluSp SINE Alu 1 292 -21 476 151 0 0 chr18 4583692 4583765 -81405169 - L1MB3 LINE L1 -39 6144 6072 24 0 0 0 chr18 4583846 4583870 -81405064 + AT_rich Low_complexity Low_complexity 1 24 0 462 280 83 0 chr18 4584037 4584194 -81404740 - MIR SINE MIR -45 217 48 2438 85 0 0 chr18 4584255 4584549 -81404385 + AluSc SINE Alu 1 294 -15 553 236 26 77 chr18 4584729 4584924 -81404010 + MIR SINE MIR 70 254 -8 311 285 13 60 chr18 4585476 4585627 -81403307 - LTR33A LTR ERVL -3 520 377 2217 112 7 0 chr18 4585749 4586044 -81402890 + AluSq SINE Alu 1 297 -16 2536 67 0 3 chr18 4586044 4586343 -81402591 + AluSp SINE Alu 1 298 -15 2216 101 0 7 chr18 4586351 4586647 -81402287 + AluSg1 SINE Alu 1 294 -15 280 237 101 79 chr18 4586729 4586868 -81402066 - LTR50 LTR ERVL -636 159 18 2397 58 0 0 chr18 4587802 4588130 -81400804 + AluY SINE Alu 7 334 0 272 297 94 25 chr18 4588322 4588682 -81400252 + L1ME4a LINE L1 2750 3134 -3012 1585 195 16 10 chr18 4588908 4589216 -81399718 + AluJo SINE Alu 1 310 -2 2266 110 0 0 chr18 4589396 4589688 -81399246 - AluSq SINE Alu -19 294 3 25 0 0 0 chr18 4589832 4589857 -81399077 + AT_rich Low_complexity Low_complexity 1 25 0 428 255 0 0 chr18 4589866 4589968 -81398966 + U13 snRNA snRNA 1 102 -2 2168 119 0 7 chr18 4590160 4590485 -81398449 + AluSx SINE Alu 1 323 0 1060 67 0 0 chr18 4590705 4590840 -81398094 + AluSp/q SINE Alu 175 309 -4 362 309 46 7 chr18 4590845 4590997 -81397937 + L1ME4a LINE L1 4255 4412 -1734 2098 73 4 7 chr18 4591084 4591359 -81397575 + AluSc SINE Alu 1 274 -35 205 143 0 41 chr18 4591374 4591403 -81397531 + (TAAA)n Simple_repeat Simple_repeat 2 30 -18 1693 193 3 0 chr18 4591403 4591693 -81397241 + 7SLRNA srpRNA srpRNA 6 296 -24 205 143 0 41 chr18 4591693 4591712 -81397222 + (TAAA)n Simple_repeat Simple_repeat 30 48 0 2058 125 10 10 chr18 4591966 4592263 -81396671 - AluJo SINE Alu -15 297 1 2007 120 0 0 chr18 4592361 4592628 -81396306 + AluSx SINE Alu 31 297 -15 1754 151 35 111 chr18 4592697 4593067 -81395867 - Tigger3(Golem) DNA MER2_type -7 3022 1 403 328 38 27 chr18 4593422 4593605 -81395329 + L1ME4a LINE L1 5197 5381 -765 2235 93 4 0 chr18 4593612 4593917 -81395017 + AluSg SINE Alu 3 308 0 2466 82 0 0 chr18 4593924 4594228 -81394706 + AluY SINE Alu 1 304 -7 200 213 0 0 chr18 4594230 4594277 -81394657 + (TA)n Simple_repeat Simple_repeat 2 48 0 2112 120 7 0 chr18 4594711 4595003 -81393931 + AluSx SINE Alu 1 294 -18 388 0 39 0 chr18 4595815 4595867 -81393067 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 249 327 45 9 chr18 4596048 4596158 -81392776 + L2 LINE L2 3154 3267 -5 279 211 32 21 chr18 4596442 4596537 -81392397 + (TA)n Simple_repeat Simple_repeat 1 96 0 282 56 0 0 chr18 4596539 4596575 -81392359 + MADE1 DNA Mariner 45 80 0 392 289 113 32 chr18 4596603 4596914 -81392020 + L1ME4a LINE L1 5548 5883 -238 2314 85 0 31 chr18 4597037 4597356 -81391578 - AluSc SINE Alu 0 309 1 1999 117 7 7 chr18 4597468 4597758 -81391176 + AluSx SINE Alu 9 298 -14 564 201 67 15 chr18 4597809 4597943 -81390991 + MIR SINE MIR 12 152 -110 7258 153 38 53 chr18 4597964 4599141 -81389793 + L1MCa LINE L1 46 1198 -5228 2439 93 3 0 chr18 4599141 4599452 -81389482 + AluSp SINE Alu 1 312 -1 7258 153 38 53 chr18 4599452 4599783 -81389151 + L1MCa LINE L1 1198 1532 -4894 1712 184 10 3 chr18 4599783 4600103 -81388831 + AluJb SINE Alu 1 312 0 308 170 0 0 chr18 4600119 4600166 -81388768 + Alu SINE Alu 1 47 -255 1420 97 0 0 chr18 4600185 4600370 -81388564 + AluSg/x SINE Alu 121 305 -7 1352 155 5 0 chr18 4600370 4600576 -81388358 - THE1B LTR MaLR -157 207 1 363 240 0 0 chr18 4600576 4600651 -81388283 - FLAM_A SINE Alu -36 97 23 21 0 0 0 chr18 4600654 4600675 -81388259 + AT_rich Low_complexity Low_complexity 1 21 0 2318 80 7 3 chr18 4600675 4600961 -81387973 - AluSq SINE Alu -24 289 3 936 152 63 0 chr18 4600970 4601128 -81387806 + THE1B LTR MaLR 195 362 -2 2130 132 81 32 chr18 4601182 4601444 -81387490 + L1MCa LINE L1 1525 1773 -4653 1911 133 9 69 chr18 4601444 4601776 -81387158 - AluSx SINE Alu 0 312 1 2130 132 81 32 chr18 4601776 4602233 -81386701 + L1MCa LINE L1 1773 2429 -3997 511 73 29 0 chr18 4602233 4602301 -81386633 - MER75 DNA T2_type 0 514 445 1285 107 0 0 chr18 4602301 4602469 -81386465 - AluSg/x SINE Alu -11 301 134 2464 83 0 0 chr18 4602469 4602771 -81386163 - AluSg SINE Alu -8 302 1 3715 190 52 44 chr18 4602772 4602989 -81385945 + L1MCa LINE L1 1934 2148 -4278 2280 98 10 0 chr18 4602989 4603285 -81385649 + AluSg SINE Alu 1 299 -11 3715 190 52 44 chr18 4603285 4603537 -81385397 + L1MCa LINE L1 2148 2397 -4029 3689 93 14 0 chr18 4603537 4604044 -81384890 - MER75 DNA T2_type 0 514 1 3715 190 52 44 chr18 4604044 4604377 -81384557 + L1MCa LINE L1 2397 2726 -3700 1959 124 37 0 chr18 4604377 4604673 -81384261 + AluSx SINE Alu 1 306 0 3715 190 52 44 chr18 4604673 4604967 -81383967 + L1MCa LINE L1 2726 3016 -3410 1636 122 0 0 chr18 4604967 4605189 -81383745 - AluSq SINE Alu -15 298 77 3715 190 52 44 chr18 4605189 4605375 -81383559 + L1MCa LINE L1 3016 3199 -3227 2284 102 0 7 chr18 4605375 4605669 -81383265 - AluSg SINE Alu -17 293 2 3715 190 52 44 chr18 4605669 4606011 -81382923 + L1MCa LINE L1 3199 3575 -2851 322 233 0 0 chr18 4606011 4606071 -81382863 - AluJ/FLAM SINE Alu -237 65 6 3607 170 67 6 chr18 4606078 4606779 -81382155 + L1MC1 LINE L1 5584 6327 -6 216 291 38 13 chr18 4606811 4606890 -81382044 + MIR SINE MIR 152 232 -30 2341 78 3 0 chr18 4607070 4607381 -81381553 - AluSq SINE Alu 0 312 1 2338 108 3 0 chr18 4609077 4609384 -81379550 + AluSx SINE Alu 1 308 -4 1011 279 21 18 chr18 4609803 4610136 -81378798 + HAL1 LINE L1 1 334 -2173 1212 262 40 51 chr18 4610152 4610705 -81378229 + HAL1 LINE L1 405 951 -1556 1654 158 6 86 chr18 4610805 4611141 -81377793 + AluJo SINE Alu 2 310 -2 689 174 18 12 chr18 4611141 4611308 -81377626 + GA-rich Low_complexity Low_complexity 1 168 0 1979 138 13 3 chr18 4611362 4611660 -81377274 + AluSx SINE Alu 1 301 -11 258 105 0 0 chr18 4611720 4611758 -81377176 + (TA)n Simple_repeat Simple_repeat 1 38 0 1988 125 28 115 chr18 4611759 4611869 -81377065 - MLT1B LTR MaLR -2 388 270 2424 95 3 0 chr18 4611869 4612175 -81376759 + AluSx SINE Alu 1 307 -5 1988 125 28 115 chr18 4612175 4612384 -81376550 - MLT1B LTR MaLR -120 270 44 1912 153 3 10 chr18 4612384 4612692 -81376242 + AluJo SINE Alu 1 306 -6 2332 89 0 0 chr18 4612698 4613023 -81375911 + AluSg SINE Alu 1 325 0 1988 125 28 115 chr18 4613023 4613119 -81375815 - MLT1B LTR MaLR -351 39 1 350 194 156 151 chr18 4613124 4613279 -81375655 + HAL1 LINE L1 2109 2262 -245 2364 104 0 0 chr18 4613279 4613586 -81375348 + AluSg SINE Alu 1 307 -3 350 194 156 151 chr18 4613586 4613821 -81375113 + HAL1 LINE L1 2262 2501 -6 1933 155 0 7 chr18 4613858 4614155 -81374779 - AluSx SINE Alu -17 295 1 462 208 10 0 chr18 4614156 4614252 -81374682 - L1M4 LINE L1 -2022 4124 4028 948 147 6 19 chr18 4614270 4614427 -81374507 - AluJb SINE Alu -157 155 1 756 198 11 6 chr18 4614451 4614628 -81374306 - L1M4 LINE L1 -2130 4016 3839 4175 170 42 49 chr18 4614636 4615583 -81373351 - L1MB5 LINE L1 -6 6168 5215 2555 52 0 3 chr18 4615583 4615890 -81373044 - AluY SINE Alu -5 306 1 3295 229 62 14 chr18 4615891 4616478 -81372456 - L1MB5 LINE L1 -2850 3296 2640 1662 166 35 3 chr18 4616478 4616768 -81372166 - AluJb SINE Alu -13 299 1 3295 229 62 14 chr18 4616768 4617182 -81371752 - L1MB5 LINE L1 -3506 2640 2247 1025 125 0 0 chr18 4617199 4617335 -81371599 - AluSq/x SINE Alu -177 136 1 614 213 45 25 chr18 4617335 4617537 -81371397 - L1MEc LINE L1 -4021 2375 2170 2138 131 0 16 chr18 4617610 4617923 -81371011 - AluSx SINE Alu -4 308 1 777 167 0 8 chr18 4618023 4618190 -81370744 + AluSg/x SINE Alu 154 319 0 1239 176 27 23 chr18 4618190 4618451 -81370483 + L1M4 LINE L1 2673 2934 -3212 394 262 7 65 chr18 4618446 4618494 -81370440 - L1PBa LINE L1 -4265 1951 1902 * 2025 146 7 0 chr18 4618494 4618802 -81370132 - AluSx SINE Alu -2 310 1 394 262 7 65 chr18 4618802 4618900 -81370034 - L1PBa LINE L1 -4314 1902 1800 207 0 0 0 chr18 4618900 4618923 -81370011 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 394 262 7 65 chr18 4618923 4618951 -81369983 - L1PBa LINE L1 -4416 1800 1590 * 1306 243 114 2 chr18 4618944 4619348 -81369586 - L1MEc LINE L1 -5926 470 22 2374 67 17 0 chr18 4619445 4619743 -81369191 + AluY SINE Alu 1 303 -8 263 253 0 11 chr18 4621595 4621686 -81367248 + CT-rich Low_complexity Low_complexity 2 91 0 2187 131 0 10 chr18 4622411 4622725 -81366209 - AluSx SINE Alu -1 311 1 234 91 0 0 chr18 4624501 4624534 -81364400 + (T)n Simple_repeat Simple_repeat 1 33 0 4183 149 4 20 chr18 4625119 4625835 -81363099 + L1MB3 LINE L1 5477 6181 -2 2265 117 0 3 chr18 4626385 4626747 -81362187 + AluSx SINE Alu 1 361 0 2297 90 37 10 chr18 4626860 4627160 -81361774 - AluSp SINE Alu -5 308 1 2468 84 0 3 chr18 4627174 4627484 -81361450 - AluY SINE Alu -2 309 1 369 0 0 0 chr18 4627796 4627837 -81361097 + (CA)n Simple_repeat Simple_repeat 2 42 0 2200 118 7 3 chr18 4627919 4628223 -81360711 + AluSx SINE Alu 2 306 -6 246 62 0 0 chr18 4628223 4628255 -81360679 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 394 86 0 0 chr18 4629079 4629137 -81359797 + L1MA2 LINE L1 6243 6300 -4 1014 160 0 0 chr18 4629171 4629327 -81359607 + FRAM SINE Alu 1 156 -10 364 171 86 0 chr18 4629639 4629709 -81359225 - AluJ/FRAM SINE Alu -2 300 225 1266 153 5 0 chr18 4629710 4629900 -81359034 - AluSx SINE Alu -121 191 1 235 278 51 51 chr18 4630012 4630188 -81358746 + MER104 DNA Tc2 5 180 0 2350 94 7 0 chr18 4630303 4630612 -81358322 - AluSp SINE Alu -2 311 1 262 227 118 64 chr18 4630613 4630723 -81358211 - L1MC5 LINE L1 -44 7917 7802 2056 157 3 0 chr18 4630757 4631057 -81357877 + AluSx SINE Alu 3 303 -9 1984 128 3 3 chr18 4631127 4631416 -81357518 + AluSx SINE Alu 1 289 -23 2312 95 0 7 chr18 4631460 4631755 -81357179 - AluSq SINE Alu -20 293 1 1665 192 10 3 chr18 4632478 4632785 -81356149 - AluJo SINE Alu -3 309 1 295 351 88 0 chr18 4633242 4633356 -81355578 + L2 LINE L2 3137 3260 -12 1860 221 11 0 chr18 4633457 4633815 -81355119 - MLT1A1 LTR MaLR -3 362 1 194 343 34 45 chr18 4633820 4633998 -81354936 + L3 LINE CR1 1383 1558 -19 21 0 0 0 chr18 4634900 4634921 -81354013 + AT_rich Low_complexity Low_complexity 1 21 0 410 154 64 0 chr18 4634926 4635004 -81353930 + L1MB4 LINE L1 6092 6174 -6 1738 144 18 25 chr18 4635019 4635357 -81353577 + AluJb SINE Alu 3 338 0 198 0 0 0 chr18 4635477 4635499 -81353435 + (A)n Simple_repeat Simple_repeat 1 22 0 21 57 0 0 chr18 4635609 4635644 -81353290 + AT_rich Low_complexity Low_complexity 1 35 0 2274 91 0 10 chr18 4637215 4637513 -81351421 + AluSg SINE Alu 5 299 -11 750 171 0 8 chr18 4638181 4638304 -81350630 - FLAM_C SINE Alu -16 127 6 391 229 100 7 chr18 4638324 4638464 -81350470 - L1MA9 LINE L1 -30 6282 6130 636 104 9 87 chr18 4638493 4638608 -81350326 - L1MB1 LINE L1 -307 5882 5777 1541 201 6 32 chr18 4638609 4638923 -81350011 - AluJo SINE Alu -6 306 1 327 130 15 34 chr18 4638929 4639033 -81349901 - L1MB1 LINE L1 -768 5363 5267 2496 57 0 3 chr18 4639048 4639344 -81349590 - AluY SINE Alu -16 295 1 996 234 2 59 chr18 4639344 4639502 -81349432 - L1 LINE L1 -811 5335 5170 2323 101 0 19 chr18 4639502 4639819 -81349115 - AluSx SINE Alu -1 311 1 996 234 2 59 chr18 4639819 4640066 -81348868 - L1 LINE L1 -976 5170 4845 2056 132 17 0 chr18 4640067 4640363 -81348571 + AluSx SINE Alu 1 301 -11 2356 105 0 6 chr18 4640473 4640788 -81348146 + AluSq SINE Alu 1 313 0 1935 173 65 8 chr18 4642134 4642503 -81346431 - MLT1B LTR MaLR 0 390 1 1195 198 12 130 chr18 4642804 4642853 -81346081 - MLT1A1 LTR MaLR 0 365 312 1185 58 0 13 chr18 4642853 4643008 -81345926 - L1PA8 LINE L1 -4 6168 6016 1195 198 12 130 chr18 4643008 4643372 -81345562 - MLT1A1 LTR MaLR -53 312 1 12929 114 28 49 chr18 4644318 4645073 -81343861 + Tigger1 DNA MER2_type 1 771 -1647 2359 90 3 0 chr18 4645073 4645374 -81343560 - AluSq SINE Alu -11 302 1 12929 114 28 49 chr18 4645374 4646002 -81342932 + Tigger1 DNA MER2_type 771 1411 -1007 2052 142 47 39 chr18 4646002 4646362 -81342572 + THE1B LTR MaLR 1 363 -1 12929 114 28 49 chr18 4646362 4646507 -81342427 + Tigger1 DNA MER2_type 1411 1558 -860 958 65 26 85 chr18 4646507 4646660 -81342274 + L1MA1 LINE L1 6155 6298 -4 12929 114 28 49 chr18 4646660 4647110 -81341824 + Tigger1 DNA MER2_type 1558 2016 -402 2173 119 7 3 chr18 4647110 4647413 -81341521 - AluJb SINE Alu -8 304 1 2423 60 7 3 chr18 4647423 4647721 -81341213 - AluY SINE Alu -12 299 1 12929 114 28 49 chr18 4647721 4647868 -81341066 + Tigger1 DNA MER2_type 2025 2094 -324 879 138 8 0 chr18 4647868 4647998 -81340936 + FLAM_C SINE Alu 1 131 -12 2114 108 63 18 chr18 4648011 4648344 -81340590 + Tigger1 DNA MER2_type 2071 2418 0 1253 98 0 6 chr18 4648639 4648803 -81340131 + AluSg/x SINE Alu 137 299 -13 653 219 126 0 chr18 4649465 4649616 -81339318 + FAM SINE Alu 1 170 -5 2385 136 20 17 chr18 4649642 4650048 -81338886 + L1MB1 LINE L1 5762 6168 0 810 127 0 0 chr18 4651179 4651289 -81337645 + FLAM_C SINE Alu 1 110 -33 248 53 26 0 chr18 4651593 4651631 -81337303 + (CAAAA)n Simple_repeat Simple_repeat 3 41 0 498 276 126 0 chr18 4652548 4652762 -81336172 - MIR SINE MIR -1 261 21 23 0 0 0 chr18 4654506 4654529 -81334405 + AT_rich Low_complexity Low_complexity 1 23 0 2275 110 13 0 chr18 4654873 4655173 -81333761 + AluSx SINE Alu 1 304 -8 1895 128 44 17 chr18 4655363 4655544 -81333390 - AluSg SINE Alu -4 306 112 396 0 0 0 chr18 4655544 4655588 -81333346 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1895 128 44 17 chr18 4655588 4655704 -81333230 - AluSg SINE Alu -198 112 1 2503 72 3 0 chr18 4656372 4656678 -81332256 - AluSp SINE Alu -6 307 1 2177 87 4 4 chr18 4656678 4656955 -81331979 - AluSq SINE Alu -36 277 1 2250 102 0 7 chr18 4657250 4657553 -81331381 - AluSg SINE Alu -9 301 1 371 251 74 0 chr18 4657573 4657699 -81331235 - MIR SINE MIR -65 143 13 1825 154 3 7 chr18 4658227 4658525 -81330409 + AluSg SINE Alu 1 297 -13 2140 131 0 3 chr18 4658796 4659094 -81329840 - AluSx SINE Alu -13 299 3 180 0 0 0 chr18 4660940 4660960 -81327974 + (T)n Simple_repeat Simple_repeat 1 20 0 28 0 0 0 chr18 4661657 4661685 -81327249 + AT_rich Low_complexity Low_complexity 1 28 0 2071 115 0 14 chr18 4661692 4661980 -81326954 + AluJb SINE Alu 1 284 -28 300 276 26 26 chr18 4667298 4667414 -81321520 - MIR SINE MIR -75 133 18 2258 104 0 13 chr18 4667523 4667821 -81321113 + AluSx SINE Alu 1 294 -18 351 0 0 0 chr18 4669541 4669580 -81319354 + (TG)n Simple_repeat Simple_repeat 2 40 0 185 258 86 32 chr18 4670480 4670573 -81318361 + L3b LINE CR1 1278 1375 -208 1070 217 21 0 chr18 4671021 4671256 -81317678 + MIR SINE MIR 13 252 -10 240 35 0 0 chr18 4671263 4671292 -81317642 + (TTA)n Simple_repeat Simple_repeat 3 31 0 196 298 119 0 chr18 4671376 4671460 -81317474 - MIR SINE MIR -137 125 32 587 266 71 28 chr18 4671714 4672080 -81316854 - L1MC4a LINE L1 -302 5819 5536 339 85 0 0 chr18 4672156 4672203 -81316731 + (A)n Simple_repeat Simple_repeat 1 47 0 2217 68 32 45 chr18 4672203 4672514 -81316420 + AluY SINE Alu 1 307 -4 794 81 7 40 chr18 4672848 4672997 -81315937 + (TTC)n Simple_repeat Simple_repeat 1 144 0 1893 176 17 6 chr18 4673050 4673409 -81315525 + L1PA16 LINE L1 5804 6166 0 2241 94 19 10 chr18 4673419 4673726 -81315208 + AluSg SINE Alu 1 310 0 1168 56 17 17 chr18 4673739 4673919 -81315015 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2037 136 13 7 chr18 4673929 4674237 -81314697 + AluSq SINE Alu 1 310 -3 2331 100 3 0 chr18 4674247 4674548 -81314386 + AluSg SINE Alu 1 302 -8 186 43 0 0 chr18 4674568 4674591 -81314343 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1245 171 167 0 chr18 4674752 4675004 -81313930 + L1PB3 LINE L1 5861 6154 0 39 15 0 46 chr18 4675234 4675299 -81313635 + AT_rich Low_complexity Low_complexity 1 62 0 2197 134 0 3 chr18 4676478 4676791 -81312143 - AluSq SINE Alu -1 312 1 778 171 8 0 chr18 4677911 4678040 -81310894 - FLAM_A SINE Alu -3 130 1 2145 121 7 23 chr18 4678155 4678461 -81310473 + AluSx SINE Alu 1 301 -11 2309 112 0 0 chr18 4678461 4678756 -81310178 + AluSx SINE Alu 1 295 -17 2232 126 0 3 chr18 4679697 4680007 -81308927 + AluSx SINE Alu 1 309 -3 246 207 0 0 chr18 4680061 4680119 -81308815 + (TA)n Simple_repeat Simple_repeat 2 59 0 1320 241 66 48 chr18 4680907 4681222 -81307712 - MER39 LTR ERV1 0 707 380 1498 129 91 45 chr18 4681222 4681509 -81307425 + AluJo SINE Alu 1 300 -12 1320 241 66 48 chr18 4681509 4681633 -81307301 - MER39 LTR ERV1 -327 380 260 243 164 68 82 chr18 4681616 4681689 -81307245 - LTR48B LTR ERV1 -552 92 21 * 1787 190 7 0 chr18 4682032 4682332 -81306602 + AluJo SINE Alu 1 302 -10 182 285 16 81 chr18 4682514 4682637 -81306297 - MIR SINE MIR -110 152 38 1014 154 8 2 chr18 4682768 4683015 -81305919 + AluJb SINE Alu 2 303 -9 221 305 67 19 chr18 4683059 4683164 -81305770 - MIR SINE MIR -48 214 105 1882 151 0 4 chr18 4683276 4683554 -81305380 - AluJb SINE Alu -35 277 1 409 305 70 38 chr18 4684042 4684429 -81304505 - MLT1L LTR MaLR -167 421 5 432 158 26 0 chr18 4685161 4685237 -81303697 + MER45B DNA AcHobo 503 580 -460 336 300 30 0 chr18 4685381 4685481 -81303453 + MER45B DNA AcHobo 1 103 -937 * 986 100 0 0 chr18 4685472 4685602 -81303332 - Tigger1 DNA MER2_type -337 2081 1952 262 86 0 0 chr18 4685602 4685637 -81303297 + THE1A LTR MaLR 1 35 -320 2465 70 3 0 chr18 4685637 4685936 -81302998 - AluSc SINE Alu -9 300 1 237 183 139 35 chr18 4685991 4686106 -81302828 + Charlie7 DNA MER1_type 2473 2599 -13 * 296 100 0 0 chr18 4686101 4686141 -81302793 - Alu SINE Alu -261 40 1 * 1931 88 62 88 chr18 4686141 4686417 -81302517 + THE1B LTR MaLR 28 310 -54 2085 110 3 3 chr18 4686417 4686719 -81302215 + AluSq SINE Alu 1 302 0 2329 97 0 0 chr18 4686723 4687021 -81301913 + AluSx SINE Alu 1 298 -14 1931 88 62 88 chr18 4687021 4687084 -81301850 + THE1B LTR MaLR 313 364 0 364 134 0 60 chr18 4687084 4687151 -81301783 - Tigger1 DNA MER2_type -462 1956 1894 1570 101 0 0 chr18 4687151 4687358 -81301576 - AluSq SINE Alu -4 309 103 817 88 0 0 chr18 4687435 4687537 -81301397 - AluSq SINE Alu -211 102 1 12395 121 15 21 chr18 4687538 4688162 -81300772 - Tigger1 DNA MER2_type -525 1893 1267 2220 89 7 0 chr18 4688162 4688443 -81300491 + AluY SINE Alu 15 297 -14 12395 121 15 21 chr18 4688443 4689129 -81299805 - Tigger1 DNA MER2_type -1151 1267 578 2233 106 0 10 chr18 4689129 4689441 -81299493 + AluSx SINE Alu 1 309 -3 12395 121 15 21 chr18 4689441 4689809 -81299125 - Tigger1 DNA MER2_type -1840 578 225 2121 120 7 3 chr18 4689809 4690117 -81298817 + AluSg SINE Alu 1 309 -1 12395 121 15 21 chr18 4690117 4690328 -81298606 - Tigger1 DNA MER2_type -2193 225 14 2173 203 70 25 chr18 4690345 4690502 -81298432 + MER45B DNA AcHobo 487 635 -946 1865 145 25 3 chr18 4690502 4690784 -81298150 + AluJo SINE Alu 7 294 -18 1947 153 7 0 chr18 4690791 4691098 -81297836 + AluSx SINE Alu 1 309 -3 2173 203 70 25 chr18 4691098 4691460 -81297474 + MER45B DNA AcHobo 640 1038 -2 2339 117 0 0 chr18 4691695 4692003 -81296931 - AluSx SINE Alu -4 308 1 1954 125 0 60 chr18 4692502 4692821 -81296113 - AluSx SINE Alu -12 300 1 258 333 63 0 chr18 4693063 4693174 -81295760 - MIR3 SINE MIR -14 194 77 2549 66 0 3 chr18 4693391 4693694 -81295240 + AluSg SINE Alu 1 302 -8 244 273 64 36 chr18 4694137 4694247 -81294687 - MIR SINE MIR -54 208 96 1853 158 7 20 chr18 4694291 4694588 -81294346 - AluSx SINE Alu -19 293 1 1655 123 58 55 chr18 4694761 4694885 -81294049 + AluJo SINE Alu 1 123 -189 2290 93 7 0 chr18 4694885 4695176 -81293758 - AluSp SINE Alu -20 293 1 1655 123 58 55 chr18 4695176 4695344 -81293590 + AluJo SINE Alu 123 294 -18 237 277 152 0 chr18 4696904 4697016 -81291918 + MIR SINE MIR 74 202 -60 26 30 0 0 chr18 4697031 4697064 -81291870 + AT_rich Low_complexity Low_complexity 1 33 0 2096 128 7 0 chr18 4697185 4697474 -81291460 - AluSx SINE Alu -21 291 1 513 95 74 32 chr18 4697507 4697602 -81291332 - L1MA8 LINE L1 -3 6288 6190 2500 36 0 0 chr18 4697669 4697990 -81290944 - AluY SINE Alu 0 321 1 1502 134 0 0 chr18 4698000 4698209 -81290725 - AluJo SINE Alu -20 292 84 1788 171 18 0 chr18 4698308 4698589 -81290345 + AluJo SINE Alu 1 286 -26 2185 118 0 13 chr18 4698975 4699281 -81289653 + AluSx SINE Alu 1 302 -10 315 296 123 25 chr18 4700220 4700382 -81288552 + MER5B DNA MER1_type 1 178 0 1633 259 89 73 chr18 4700417 4702266 -81286668 + L1ME LINE L1 10 1827 -4253 300 26 0 0 chr18 4702266 4702304 -81286630 + L1PB4 LINE L1 6113 6150 -6 2194 124 0 7 chr18 4702304 4702610 -81286324 + AluSx SINE Alu 1 304 -8 1633 259 89 73 chr18 4702610 4702996 -81285938 + L1ME LINE L1 1826 2255 -3825 29 0 0 0 chr18 4704882 4704911 -81284023 + AT_rich Low_complexity Low_complexity 1 29 0 2508 75 3 0 chr18 4709207 4709515 -81279419 - AluSp SINE Alu -4 309 1 853 117 0 36 chr18 4709683 4709820 -81279114 + FLAM_C SINE Alu 2 133 0 180 0 0 0 chr18 4711934 4711954 -81276980 + (CGGGGG)n Simple_repeat Simple_repeat 5 24 0 232 169 56 14 chr18 4712779 4712850 -81276084 + C-rich Low_complexity Low_complexity 3 76 0 252 0 0 0 chr18 4714181 4714209 -81274725 + (A)n Simple_repeat Simple_repeat 1 28 0 2335 106 0 0 chr18 4716444 4716745 -81272189 + AluSx SINE Alu 1 301 -11 186 103 0 0 chr18 4717140 4717169 -81271765 + (T)n Simple_repeat Simple_repeat 1 29 0 2691 58 0 0 chr18 4717175 4717486 -81271448 - AluY SINE Alu 0 311 1 289 296 77 39 chr18 4717651 4717799 -81271135 + L2 LINE L2 2948 3110 -203 957 177 13 78 chr18 4717799 4718031 -81270903 - MER20 DNA MER1_type 0 219 3 289 296 77 39 chr18 4718031 4718115 -81270819 + L2 LINE L2 3110 3189 -124 42 57 0 0 chr18 4718143 4718213 -81270721 + AT_rich Low_complexity Low_complexity 1 70 0 524 135 0 0 chr18 4718220 4718309 -81270625 + AluS SINE Alu 224 312 0 221 268 71 0 chr18 4718322 4718378 -81270556 + L2 LINE L2 3252 3311 -2 1397 86 72 0 chr18 4718394 4718615 -81270319 + L1PA14 LINE L1 5922 6158 -3 2272 89 3 35 chr18 4718668 4718981 -81269953 + AluSg SINE Alu 1 303 -7 192 291 58 0 chr18 4718987 4719073 -81269861 - MIR SINE MIR -12 250 160 945 88 0 0 chr18 4719078 4719191 -81269743 + AluSq/x SINE Alu 1 113 -199 656 97 78 10 chr18 4719222 4719325 -81269609 + AluSp/q SINE Alu 183 292 -21 528 168 11 11 chr18 4719405 4719500 -81269434 + FRAM SINE Alu 66 160 -16 240 306 0 0 chr18 4719501 4719563 -81269371 - MIR SINE MIR -108 154 93 586 254 108 56 chr18 4719812 4720182 -81268752 - L1ME LINE L1 -428 5693 5295 704 150 9 9 chr18 4720188 4720301 -81268633 - FLAM_C SINE Alu -24 119 7 422 278 37 53 chr18 4720649 4720976 -81267958 + L1M4 LINE L1 4381 4704 -1442 1128 170 9 54 chr18 4721287 4721511 -81267423 + MER20 DNA MER1_type 2 215 -4 320 163 82 61 chr18 4722126 4722224 -81266710 - L1ME LINE L1 -302 5819 5720 1906 134 4 4 chr18 4722542 4722819 -81266115 - AluSx SINE Alu -13 299 23 1870 160 0 0 chr18 4722872 4723172 -81265762 - AluJb SINE Alu -12 300 1 23 0 0 0 chr18 4723239 4723262 -81265672 + AT_rich Low_complexity Low_complexity 1 23 0 2137 99 20 0 chr18 4723268 4723560 -81265374 + AluSp SINE Alu 1 298 -15 669 193 27 48 chr18 4723629 4723816 -81265118 - L1MC5 LINE L1 -30 7931 7749 333 47 0 0 chr18 4724282 4724325 -81264609 + (TG)n Simple_repeat Simple_repeat 1 43 0 2420 78 0 0 chr18 4724815 4725109 -81263825 - AluSq SINE Alu -19 294 1 2163 133 0 0 chr18 4725779 4726088 -81262846 - AluSx SINE Alu -3 309 1 2128 95 21 0 chr18 4726091 4726374 -81262560 - AluSx SINE Alu -23 289 1 865 184 0 13 chr18 4726884 4727036 -81261898 + FRAM SINE Alu 1 150 -26 2168 84 3 20 chr18 4727413 4727711 -81261223 + AluSx SINE Alu 1 293 -19 2075 109 6 48 chr18 4728182 4728345 -81260589 - AluSx SINE Alu -14 298 153 2347 103 3 0 chr18 4728345 4728656 -81260278 - AluSp SINE Alu -1 312 1 2075 109 6 48 chr18 4728656 4728803 -81260131 - AluSx SINE Alu -159 153 1 849 142 0 37 chr18 4728990 4729152 -81259782 - L1MB3 LINE L1 0 6183 6028 434 222 0 0 chr18 4729152 4729233 -81259701 + AluJ/FRAM SINE Alu 214 294 -18 298 237 0 0 chr18 4729234 4729310 -81259624 - L1MB4 LINE L1 -147 6033 5958 809 158 14 0 chr18 4729344 4729483 -81259451 - L1MB4 LINE L1 -225 5955 5815 2019 140 0 19 chr18 4729537 4729852 -81259082 + AluSx SINE Alu 1 309 -3 2429 72 3 0 chr18 4729852 4730156 -81258778 + AluSp SINE Alu 1 305 -8 273 273 64 36 chr18 4730599 4730709 -81258225 - MIR SINE MIR -54 208 96 1828 159 7 20 chr18 4730753 4731049 -81257885 - AluSx SINE Alu -20 292 1 1640 123 58 55 chr18 4731222 4731346 -81257588 + AluJo SINE Alu 1 123 -189 2268 93 7 0 chr18 4731346 4731637 -81257297 - AluSp SINE Alu -20 293 1 1640 123 58 55 chr18 4731637 4731805 -81257129 + AluJo SINE Alu 123 294 -18 272 270 157 0 chr18 4733363 4733478 -81255456 + MIR SINE MIR 70 202 -60 26 30 0 0 chr18 4733493 4733526 -81255408 + AT_rich Low_complexity Low_complexity 1 33 0 2060 132 7 0 chr18 4733647 4733936 -81254998 - AluSx SINE Alu -21 291 1 536 95 74 32 chr18 4733969 4734064 -81254870 - L1MA8 LINE L1 -3 6288 6190 2445 43 0 0 chr18 4734131 4734447 -81254487 - AluY SINE Alu 0 316 1 1489 134 0 0 chr18 4734457 4734666 -81254268 - AluJo SINE Alu -20 292 84 1772 171 18 0 chr18 4734765 4735046 -81253888 + AluJo SINE Alu 1 286 -26 2137 121 0 13 chr18 4735432 4735738 -81253196 + AluSx SINE Alu 1 302 -10 331 274 0 0 chr18 4736677 4736750 -81252184 + MER5B DNA MER1_type 1 73 -105 201 45 45 23 chr18 4736750 4736794 -81252140 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 293 174 0 0 chr18 4736794 4736840 -81252094 + MER5B DNA MER1_type 133 178 0 1766 259 94 71 chr18 4736875 4738714 -81250220 + L1ME4a LINE L1 10 1805 -4275 313 26 0 0 chr18 4738714 4738752 -81250182 + L1PB4 LINE L1 6113 6150 -6 2175 124 0 7 chr18 4738752 4739058 -81249876 + AluSx SINE Alu 1 304 -8 1766 259 94 71 chr18 4739058 4739444 -81249490 + L1ME4a LINE L1 1804 2255 -3825 29 0 0 0 chr18 4741330 4741359 -81247575 + AT_rich Low_complexity Low_complexity 1 29 0 2474 75 3 0 chr18 4745656 4745963 -81242971 - AluSp SINE Alu -5 308 1 1523 177 0 20 chr18 4746207 4746507 -81242427 + AluSg1 SINE Alu 1 294 -15 276 237 101 79 chr18 4746589 4746728 -81242206 - LTR50 LTR ERVL -636 159 18 2370 58 0 0 chr18 4747662 4747990 -81240944 + AluY SINE Alu 7 334 0 308 297 94 25 chr18 4748182 4748542 -81240392 + L1ME4a LINE L1 2684 3068 -3012 1585 201 16 3 chr18 4748768 4749076 -81239858 + AluJo SINE Alu 1 312 0 2232 113 0 0 chr18 4749256 4749548 -81239386 - AluSq SINE Alu -19 294 3 302 314 42 8 chr18 4749554 4749672 -81239262 + L1ME4a LINE L1 3557 3678 -2402 25 0 0 0 chr18 4749692 4749717 -81239217 + AT_rich Low_complexity Low_complexity 1 25 0 460 255 0 0 chr18 4749726 4749828 -81239106 + U13 snRNA snRNA 1 102 -2 2160 116 0 7 chr18 4750021 4750346 -81238588 + AluSx SINE Alu 1 323 0 1038 68 0 0 chr18 4750566 4750699 -81238235 + AluSp/q SINE Alu 175 307 -6 232 294 46 13 chr18 4750705 4750858 -81238076 + L1ME4a LINE L1 4189 4346 -1734 2077 76 4 7 chr18 4750945 4751220 -81237714 + AluSc SINE Alu 1 274 -35 205 143 0 41 chr18 4751235 4751264 -81237670 + (TAAA)n Simple_repeat Simple_repeat 2 30 -18 1693 190 3 0 chr18 4751264 4751554 -81237380 + 7SLRNA srpRNA srpRNA 6 296 -24 205 143 0 41 chr18 4751554 4751573 -81237361 + (TAAA)n Simple_repeat Simple_repeat 30 48 0 2045 118 9 37 chr18 4751804 4752125 -81236809 - AluJo SINE Alu 0 312 1 1940 127 0 0 chr18 4752223 4752490 -81236444 + AluSx SINE Alu 31 297 -15 1745 151 35 111 chr18 4752559 4752929 -81236005 - Tigger3(Golem) DNA MER2_type -6 3023 1 236 328 38 27 chr18 4753284 4753467 -81235467 + L1ME4a LINE L1 5131 5315 -765 2228 90 4 0 chr18 4753474 4753779 -81235155 + AluSg SINE Alu 3 308 0 2292 82 0 0 chr18 4753786 4754068 -81234866 + AluY SINE Alu 1 282 -29 22 0 0 0 chr18 4754086 4754108 -81234826 + AT_rich Low_complexity Low_complexity 1 22 0 2047 120 10 0 chr18 4754573 4754864 -81234070 + AluSx SINE Alu 1 294 -18 388 0 39 0 chr18 4755675 4755727 -81233207 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 283 327 45 9 chr18 4755908 4756018 -81232916 + L2 LINE L2 3154 3267 -5 279 211 32 21 chr18 4756302 4756397 -81232537 + (TA)n Simple_repeat Simple_repeat 1 96 0 282 56 0 0 chr18 4756399 4756435 -81232499 - MADE1 DNA Mariner -44 36 1 417 289 113 32 chr18 4756463 4756774 -81232160 + L1ME4a LINE L1 5482 5817 -238 2248 93 0 34 chr18 4756896 4757218 -81231716 - AluSx SINE Alu -1 311 1 4382 149 4 20 chr18 4757768 4758484 -81230450 - L1MB3 LINE L1 -2 6181 5477 225 94 0 0 chr18 4759075 4759107 -81229827 + (A)n Simple_repeat Simple_repeat 1 32 0 2150 131 0 10 chr18 4760882 4761194 -81227740 + AluSx SINE Alu 1 309 -3 1841 120 0 26 chr18 4761429 4761695 -81227239 - AluSp SINE Alu -54 259 1 831 171 8 0 chr18 4761810 4761939 -81226995 + FLAM_A SINE Alu 1 130 -3 198 273 253 40 chr18 4762640 4762790 -81226144 + MER5A DNA MER1_type 8 189 0 945 80 0 0 chr18 4763059 4763172 -81225762 + AluSq/x SINE Alu 1 113 -199 700 97 78 10 chr18 4763203 4763306 -81225628 + AluSp/q SINE Alu 183 292 -21 565 168 11 11 chr18 4763386 4763481 -81225453 + FRAM SINE Alu 66 160 -16 256 306 0 0 chr18 4763482 4763544 -81225390 - MIR SINE MIR -108 154 93 604 264 102 49 chr18 4763793 4764163 -81224771 - L1ME LINE L1 -428 5693 5295 755 150 9 9 chr18 4764169 4764282 -81224652 - FLAM_C SINE Alu -24 119 7 437 294 46 55 chr18 4764630 4764957 -81223977 + L1M4 LINE L1 4381 4704 -1442 1081 167 9 54 chr18 4765268 4765490 -81223444 + MER20 DNA MER1_type 2 213 -6 320 163 82 61 chr18 4766108 4766206 -81222728 - L1ME LINE L1 -302 5819 5720 2253 107 0 3 chr18 4766524 4766824 -81222110 - AluSx SINE Alu -13 299 1 204 97 0 0 chr18 4767022 4767053 -81221881 + (CCAA)n Simple_repeat Simple_repeat 2 32 0 2277 107 0 10 chr18 4767463 4767772 -81221162 - AluSq SINE Alu -7 306 1 1529 173 147 23 chr18 4767885 4768191 -81220743 - MER2 DNA MER2_type 0 344 1 443 302 115 39 chr18 4768209 4768573 -81220361 + MLT1J LTR MaLR 102 493 -18 983 118 0 0 chr18 4768604 4768731 -81220203 - FLAM_C SINE Alu -6 127 1 472 291 57 105 chr18 4768741 4769093 -81219841 - L1ME4a LINE L1 -3 6118 5800 2119 121 0 0 chr18 4769093 4769382 -81219552 + AluSx SINE Alu 6 294 -18 472 291 57 105 chr18 4769382 4769572 -81219362 - L1ME4a LINE L1 -321 5800 5602 2105 121 3 3 chr18 4769592 4769899 -81219035 - AluSx SINE Alu -5 307 1 2104 119 14 0 chr18 4770016 4770310 -81218624 - AluSx SINE Alu -14 298 1 323 336 148 13 chr18 4771497 4771646 -81217288 - L1ME LINE L1 -479 5642 5474 606 176 15 76 chr18 4771646 4771777 -81217157 - FLAM_A SINE Alu -14 128 6 197 270 0 0 chr18 4772195 4772232 -81216702 + MIR SINE MIR 19 55 -207 238 275 43 22 chr18 4772340 4772478 -81216456 + L1M4 LINE L1 4109 4249 -1897 552 309 18 0 chr18 4772497 4772662 -81216272 + MIR SINE MIR 79 246 -16 23 33 0 0 chr18 4772812 4772842 -81216092 + AT_rich Low_complexity Low_complexity 1 30 0 749 137 8 0 chr18 4772842 4772959 -81215975 - FLAM_C SINE Alu -15 118 1 300 283 194 17 chr18 4772972 4773152 -81215782 + L1M4 LINE L1 4405 4616 -1530 245 310 10 0 chr18 4773568 4773668 -81215266 + AluSp/q SINE Alu 203 303 0 725 170 22 15 chr18 4773693 4773828 -81215106 - AluJo SINE Alu -176 136 1 2044 127 7 10 chr18 4773975 4774282 -81214652 + AluSx SINE Alu 1 306 -6 2033 178 98 17 chr18 4774872 4775339 -81213595 + MLT1D LTR MaLR 1 505 0 586 276 168 11 chr18 4775339 4775719 -81213215 + Charlie7 DNA MER1_type 265 704 -1908 2579 23 0 10 chr18 4775991 4776292 -81212642 - AluY SINE Alu -13 298 1 248 211 0 0 chr18 4776292 4776344 -81212590 + MER63 DNA MER1_type 181 232 -829 1137 193 120 4 chr18 4776507 4776781 -81212153 + MER63 DNA MER1_type 756 1061 0 369 93 0 0 chr18 4777769 4777823 -81211111 + (CA)n Simple_repeat Simple_repeat 2 55 0 2363 82 0 3 chr18 4777949 4778252 -81210682 - AluSc SINE Alu -7 302 1 299 321 55 64 chr18 4778255 4778566 -81210368 + L2 LINE L2 2817 3124 -189 588 218 0 0 chr18 4778586 4778696 -81210238 - FLAM_A SINE Alu -32 110 1 532 276 20 54 chr18 4778701 4778904 -81210030 + L2 LINE L2 3113 3308 -5 206 306 56 0 chr18 4779223 4779295 -81209639 + L2 LINE L2 2517 2592 -722 624 236 16 0 chr18 4779461 4779584 -81209350 - FLAM_A SINE Alu -7 126 2 876 244 91 4 chr18 4779648 4779922 -81209012 + MLT1H1 LTR MaLR 8 305 -250 180 0 0 0 chr18 4779960 4779980 -81208954 + (T)n Simple_repeat Simple_repeat 1 20 0 2393 218 61 22 chr18 4780091 4781180 -81207754 - L1MDa LINE L1 -3039 3501 2379 2282 101 3 3 chr18 4781180 4781478 -81207456 - AluSq SINE Alu -12 301 4 2393 218 61 22 chr18 4781478 4781521 -81207413 - L1MDa LINE L1 -4161 2379 2339 2264 91 0 20 chr18 4781621 4781918 -81207016 + AluSg SINE Alu 8 298 -12 1582 154 12 15 chr18 4781931 4782190 -81206744 + AluJo SINE Alu 53 310 -2 199 137 59 78 chr18 4782282 4782333 -81206601 + MIR SINE MIR 211 260 -2 224 256 45 126 chr18 4782510 4782733 -81206201 - L2 LINE L2 -182 3090 2886 528 359 47 35 chr18 4782915 4782946 -81205988 - L2 LINE L2 -727 2587 2558 3460 127 19 11 chr18 4782946 4783514 -81205420 + L1PA16 LINE L1 5594 6166 0 528 359 47 35 chr18 4783514 4784020 -81204914 - L2 LINE L2 -756 2558 2044 2225 105 10 13 chr18 4784024 4784337 -81204597 + AluSx SINE Alu 1 312 0 279 79 0 0 chr18 4784339 4784377 -81204557 + (GGA)n Simple_repeat Simple_repeat 3 40 0 595 153 81 18 chr18 4786286 4786397 -81202537 - FLAM_C SINE Alu -15 118 1 272 151 0 0 chr18 4786709 4786764 -81202170 - L1P LINE L1 -729 5427 5373 441 307 57 16 chr18 4786788 4787032 -81201902 - L1M4 LINE L1 -777 5369 5116 358 311 49 59 chr18 4787267 4787482 -81201452 - L1M4 LINE L1 -1192 4954 4741 2220 123 3 0 chr18 4787482 4787792 -81201142 + AluSx SINE Alu 1 311 -1 358 311 49 59 chr18 4787792 4787882 -81201052 - L1M4 LINE L1 -1405 4741 4652 1935 167 51 40 chr18 4788098 4788570 -81200364 - L1MB7 LINE L1 -10 6174 5698 1953 112 54 0 chr18 4788630 4788906 -81200028 + AluSx SINE Alu 6 296 -16 365 308 158 24 chr18 4789103 4789438 -81199496 - L1M4 LINE L1 -1741 4405 4026 2062 135 3 7 chr18 4789521 4789817 -81199117 + AluSx SINE Alu 1 295 -17 2478 63 0 0 chr18 4789817 4790116 -81198818 + AluY SINE Alu 1 299 -12 21 71 0 0 chr18 4790116 4790158 -81198776 + AT_rich Low_complexity Low_complexity 1 42 0 405 0 0 0 chr18 4790476 4790521 -81198413 + (GGAA)n Simple_repeat Simple_repeat 1 45 0 1649 139 0 16 chr18 4791388 4791640 -81197294 + AluSx SINE Alu 61 308 -4 231 393 7 13 chr18 4791644 4791794 -81197140 - L2 LINE L2 -572 2742 2594 1314 162 8 12 chr18 4791901 4792154 -81196780 - Tigger2 DNA MER2_type -2466 252 1 237 98 0 0 chr18 4792154 4792193 -81196741 - MER2 DNA MER2_type -177 168 130 2263 134 0 6 chr18 4792196 4792510 -81196424 + AluSx SINE Alu 1 312 0 1257 163 0 30 chr18 4792519 4792721 -81196213 + AluSg SINE Alu 3 198 -112 21 0 0 0 chr18 4792821 4792842 -81196092 + AT_rich Low_complexity Low_complexity 1 21 0 2166 96 4 0 chr18 4793480 4793761 -81195173 + AluSg SINE Alu 1 282 -28 186 71 0 0 chr18 4793761 4793789 -81195145 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 408 325 136 47 chr18 4793819 4793943 -81194991 - L3 LINE CR1 -267 1310 1198 3067 106 20 0 chr18 4793943 4794388 -81194546 - L1PA15 LINE L1 -5 6160 5707 408 325 136 47 chr18 4794388 4794734 -81194200 - L3 LINE CR1 -379 1198 798 654 271 11 33 chr18 4794761 4794942 -81193992 + MER91B DNA MER1_type 2 178 -12 297 330 113 43 chr18 4794979 4795261 -81193673 - L3 LINE CR1 -824 753 452 313 311 0 19 chr18 4795397 4795500 -81193434 + L1 LINE L1 3204 3304 -2842 1417 136 17 13 chr18 4795571 4795728 -81193206 + MER46A DNA MER2_type 1 161 -2570 1608 178 71 3 chr18 4795728 4796054 -81192880 - MER7A DNA MER2_type 0 346 1 1417 136 17 13 chr18 4796054 4796131 -81192803 + MER46A DNA MER2_type 161 236 0 26 30 0 0 chr18 4796234 4796267 -81192667 + AT_rich Low_complexity Low_complexity 1 33 0 272 232 39 78 chr18 4796412 4796745 -81192189 + L1 LINE L1 3664 3993 -2153 400 293 92 29 chr18 4797006 4797385 -81191549 - HAL1b LINE L1 -878 470 68 385 105 40 0 chr18 4797710 4797786 -81191148 - L1PA15 LINE L1 0 6165 6087 22 0 0 0 chr18 4798566 4798588 -81190346 + AT_rich Low_complexity Low_complexity 1 22 0 218 385 39 0 chr18 4798629 4798707 -81190227 - L3 LINE CR1 -1270 307 227 1979 110 0 79 chr18 4798989 4799306 -81189628 - AluSx SINE Alu -20 292 1 401 279 57 29 chr18 4799546 4799686 -81189248 - L2 LINE L2 0 3272 3129 569 329 176 30 chr18 4800194 4800957 -81187977 - L2 LINE L2 -206 3066 2209 208 87 0 43 chr18 4801070 4801116 -81187818 + (TCC)n Simple_repeat Simple_repeat 2 45 0 1545 198 83 0 chr18 4801233 4801521 -81187413 - AluJo SINE Alu 0 312 1 204 284 0 0 chr18 4801835 4801930 -81187004 + CT-rich Low_complexity Low_complexity 1 95 0 673 263 78 0 chr18 4802206 4802438 -81186496 + L1M4 LINE L1 3629 3878 -2268 2595 186 15 4 chr18 4802453 4802995 -81185939 - L1MB7 LINE L1 -46 6138 5591 347 0 23 0 chr18 4803309 4803352 -81185582 + (CA)n Simple_repeat Simple_repeat 2 45 0 1080 294 34 98 chr18 4806590 4807581 -81181353 + L2 LINE L2 2334 3254 -18 200 268 0 0 chr18 4807726 4807767 -81181167 - MIR SINE MIR -108 154 114 501 259 19 9 chr18 4808541 4808703 -81180231 + MIR SINE MIR 47 255 -7 1655 189 112 26 chr18 4808719 4809175 -81179759 + MLT1D LTR MaLR 2 496 -9 302 336 72 32 chr18 4810050 4810175 -81178759 + L2 LINE L2 3184 3313 0 2247 121 0 9 chr18 4811509 4811824 -81177110 - AluSx SINE Alu 0 312 1 21 0 0 0 chr18 4813069 4813090 -81175844 + AT_rich Low_complexity Low_complexity 1 21 0 213 216 0 0 chr18 4813458 4813509 -81175425 + L2 LINE L2 3261 3311 -2 2255 106 3 3 chr18 4813721 4814022 -81174912 - AluSc SINE Alu -8 301 1 302 241 58 86 chr18 4814575 4814749 -81174185 - HAL1 LINE L1 -1 2506 2338 372 330 28 0 chr18 4814821 4814930 -81174004 - L2 LINE L2 -1 3312 3201 2602 59 0 0 chr18 4815060 4815366 -81173568 - AluY SINE Alu -5 306 1 2002 139 7 3 chr18 4815858 4816146 -81172788 + AluJb SINE Alu 3 291 -21 981 0 0 0 chr18 4816151 4816260 -81172674 + (GGAA)n Simple_repeat Simple_repeat 4 112 0 346 326 104 0 chr18 4817642 4817777 -81171157 + MIR3 SINE MIR 4 152 -56 358 54 89 0 chr18 4817998 4818054 -81170880 + L1PA7 LINE L1 6094 6154 0 2140 110 0 7 chr18 4818808 4819107 -81169827 - AluSg SINE Alu -13 297 1 1602 190 85 3 chr18 4819508 4819871 -81169063 + MLT2C1 LTR ERVL 5 397 0 331 308 60 23 chr18 4820138 4820271 -81168663 - MIR SINE MIR -78 184 47 200 235 0 59 chr18 4820411 4820479 -81168455 - MIR SINE MIR 0 262 199 2011 160 0 0 chr18 4820727 4821033 -81167901 - AluJo SINE Alu -6 306 1 181 340 0 0 chr18 4821402 4821449 -81167485 - L2 LINE L2 -4 3268 3222 645 227 65 32 chr18 4821531 4821778 -81167156 - MER112 DNA MER1_type -1 255 1 1964 289 114 28 chr18 4821966 4823104 -81165830 + L2 LINE L2 1974 3013 -300 3495 156 25 3 chr18 4823104 4823669 -81165265 - L1PA16 LINE L1 -3 6163 5587 1964 289 114 28 chr18 4823669 4823738 -81165196 + L2 LINE L2 3013 3075 -238 1252 198 99 37 chr18 4823738 4824062 -81164872 - MER2 DNA MER2_type 0 344 1 1964 289 114 28 chr18 4824062 4824097 -81164837 + L2 LINE L2 3075 3313 0 31 26 0 0 chr18 4824824 4824862 -81164072 + AT_rich Low_complexity Low_complexity 1 38 0 2170 99 0 0 chr18 4825412 4825694 -81163240 - AluSx SINE Alu -1 311 30 255 342 107 37 chr18 4826015 4826313 -81162621 - MLT1K LTR MaLR -236 352 34 776 159 0 0 chr18 4826419 4826526 -81162408 - FLAM_A SINE Alu -35 107 1 336 282 67 67 chr18 4828039 4828077 -81160857 + MIR SINE MIR 66 103 -159 1921 129 16 30 chr18 4828077 4828380 -81160554 - AluJo SINE Alu -5 307 9 336 282 67 67 chr18 4828380 4828490 -81160444 + MIR SINE MIR 102 214 -48 205 375 39 10 chr18 4828549 4828653 -81160281 + MIR SINE MIR 108 214 -48 243 286 18 62 chr18 4829672 4829784 -81159150 + MIR SINE MIR 80 186 -76 406 256 54 18 chr18 4829946 4830114 -81158820 + MER104 DNA MER2_type 3 176 -4 1892 86 12 4 chr18 4830116 4830361 -81158573 - AluSq SINE Alu -66 247 1 1595 104 36 0 chr18 4830497 4830719 -81158215 + AluSq SINE Alu 1 230 -83 189 0 0 0 chr18 4831511 4831532 -81157402 + (T)n Simple_repeat Simple_repeat 1 21 0 423 0 0 0 chr18 4833105 4833152 -81155782 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 311 283 30 10 chr18 4833503 4833602 -81155332 - MER5B DNA MER1_type -6 172 72 266 269 179 37 chr18 4833696 4833830 -81155104 + MIR SINE MIR 2 154 -108 1682 171 20 7 chr18 4834181 4834473 -81154461 - AluJo SINE Alu -11 301 6 264 252 136 4 chr18 4836401 4836529 -81152405 - MIR3 SINE MIR -28 180 29 2099 129 0 10 chr18 4836606 4836917 -81152017 + AluSg SINE Alu 1 308 -2 339 289 0 33 chr18 4838021 4838111 -81150823 - MIR SINE MIR -161 101 15 189 337 76 11 chr18 4839513 4839605 -81149329 - L3 LINE CR1 -1036 541 444 251 397 33 0 chr18 4840390 4840511 -81148423 + L3 LINE CR1 1433 1557 -20 790 222 57 0 chr18 4840528 4840722 -81148212 - MER3 DNA MER1_type -4 205 1 230 361 120 0 chr18 4840888 4841021 -81147913 + MIR SINE MIR 52 200 -62 182 306 0 0 chr18 4842683 4842719 -81146215 - L2 LINE L2 -90 3182 3147 395 235 70 0 chr18 4842985 4843100 -81145834 - MLT1D LTR MaLR -382 123 1 600 281 46 40 chr18 4843187 4843438 -81145496 + MIR SINE MIR 13 262 0 2498 188 47 26 chr18 4843571 4843635 -81145299 - MLT1D LTR MaLR 0 505 444 2440 53 3 0 chr18 4843635 4843938 -81144996 - AluY SINE Alu 0 304 1 2498 188 47 26 chr18 4843938 4844367 -81144567 - MLT1D LTR MaLR -61 444 1 229 326 21 0 chr18 4845147 4845242 -81143692 + (TATATG)n Simple_repeat Simple_repeat 1 97 0 230 125 0 21 chr18 4845242 4845290 -81143644 + LTR66 LTR ERVL 405 451 -159 239 280 68 68 chr18 4845315 4845433 -81143501 - L2 LINE L2 -14 3258 3141 319 350 58 25 chr18 4845470 4845713 -81143221 - L2 LINE L2 -776 2538 2288 334 295 72 30 chr18 4845725 4845891 -81143043 - L2 LINE L2 -675 2639 2467 379 325 136 18 chr18 4845893 4846284 -81142650 - L2 LINE L2 -1018 2296 1860 30 27 0 0 chr18 4846573 4846610 -81142324 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr18 4846776 4846797 -81142137 + AT_rich Low_complexity Low_complexity 1 21 0 2410 66 0 13 chr18 4846876 4847177 -81141757 - AluY SINE Alu -14 297 1 627 239 174 0 chr18 4848569 4848770 -81140164 + MIR SINE MIR 11 246 -16 374 261 148 7 chr18 4849115 4849257 -81139677 + MIR SINE MIR 31 192 -70 1348 97 11 0 chr18 4850538 4850723 -81138211 + L1MA3 LINE L1 6119 6305 0 2297 84 0 0 chr18 4850728 4851013 -81137921 + AluY SINE Alu 21 305 -6 2087 172 27 0 chr18 4851884 4852222 -81136712 - MER7A DNA MER2_type -1 345 1 239 278 0 0 chr18 4852809 4852863 -81136071 - MLT1C LTR MaLR 0 467 414 * 518 208 19 0 chr18 4852860 4852966 -81135968 - MLT1C LTR MaLR -359 108 1 474 250 0 0 chr18 4853948 4854052 -81134882 - U13 snRNA snRNA 0 104 1 2105 126 0 0 chr18 4854263 4854549 -81134385 + AluJb SINE Alu 1 286 -26 223 240 0 0 chr18 4856016 4856066 -81132868 + MIR SINE MIR 72 121 -141 1294 69 0 13 chr18 4857612 4857771 -81131163 + L1PA10 LINE L1 5999 6155 -13 456 290 74 11 chr18 4857813 4857989 -81130945 - MIR SINE MIR -29 233 47 203 59 0 29 chr18 4859123 4859157 -81129777 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 299 256 33 22 chr18 4859416 4859506 -81129428 + L3b LINE CR1 1315 1405 -178 297 301 0 21 chr18 4860157 4860250 -81128684 + MIR SINE MIR 168 258 -4 184 325 241 0 chr18 4860275 4860358 -81128576 - L2 LINE L2 -29 3243 3141 1914 133 39 0 chr18 4861084 4861363 -81127571 + AluSx SINE Alu 1 290 -22 423 0 0 0 chr18 4861364 4861411 -81127523 + (TA)n Simple_repeat Simple_repeat 1 47 0 767 257 23 0 chr18 4862190 4862361 -81126573 - MER63A DNA MER1_type -35 175 1 379 292 156 0 chr18 4862398 4862552 -81126382 - MIR3 SINE MIR 0 208 31 2213 98 0 0 chr18 4863089 4863401 -81125533 + AluSg SINE Alu 4 315 0 593 236 208 0 chr18 4863684 4863900 -81125034 - MIR SINE MIR 0 262 2 2550 157 34 5 chr18 4864087 4864500 -81124434 + MSTB LTR MaLR 1 425 -1 452 310 0 6 chr18 4864820 4864978 -81123956 - L1MC4a LINE L1 -1902 5906 5750 2114 116 17 10 chr18 4866199 4866501 -81122433 + AluSg SINE Alu 2 305 -5 25 75 0 0 chr18 4866533 4866586 -81122348 + AT_rich Low_complexity Low_complexity 1 53 0 2229 120 87 3 chr18 4867238 4867572 -81121362 - THE1B LTR MaLR -2 362 1 1621 181 64 39 chr18 4867825 4868018 -81120916 - MLT1A2 LTR MaLR -5 369 161 2088 104 30 3 chr18 4868018 4868316 -81120618 - AluSc SINE Alu -3 306 1 1621 181 64 39 chr18 4868316 4868482 -81120452 - MLT1A2 LTR MaLR -213 161 1 665 136 0 18 chr18 4869614 4869724 -81119210 + FLAM_A SINE Alu 30 137 -5 2492 76 0 0 chr18 4869754 4870058 -81118876 + AluSc SINE Alu 1 304 -5 717 285 170 16 chr18 4871301 4871884 -81117050 - L2 LINE L2 -1 3312 2644 430 281 208 8 chr18 4871889 4872149 -81116785 - L2 LINE L2 -532 2782 2471 1924 124 50 14 chr18 4872886 4873169 -81115765 - AluSx SINE Alu -19 293 1 1095 149 0 12 chr18 4873435 4873603 -81115331 - FRAM SINE Alu -11 165 1 243 146 0 0 chr18 4873816 4873857 -81115077 + (CA)n Simple_repeat Simple_repeat 2 42 0 2015 152 3 3 chr18 4874800 4875110 -81113824 + AluJo SINE Alu 1 310 -2 489 335 51 19 chr18 4875594 4875964 -81112970 + L2 LINE L2 1894 2275 -1039 259 284 62 86 chr18 4876195 4876357 -81112577 + L2 LINE L2 3111 3268 -4 235 308 0 26 chr18 4876525 4876642 -81112292 - L1ME LINE L1 -209 5912 5799 273 211 66 26 chr18 4877105 4877181 -81111753 - MIR3 SINE MIR -5 203 125 1561 214 116 16 chr18 4877194 4877634 -81111300 - LTR48B LTR ERV1 -160 484 1 2358 110 3 0 chr18 4877857 4878166 -81110768 - AluSg SINE Alu 0 310 1 1460 161 51 65 chr18 4879104 4879440 -81109494 + MLT1D LTR MaLR 1 331 -174 2260 181 99 36 chr18 4879450 4880037 -81108897 + LTR48B LTR ERV1 21 644 0 979 176 11 11 chr18 4880037 4880223 -81108711 + MLT1D LTR MaLR 320 505 0 304 248 41 16 chr18 4880405 4880526 -81108408 - L2 LINE L2 -375 2939 2816 4415 173 46 8 chr18 4881562 4882564 -81106370 - L1MB7 LINE L1 0 6184 5140 2358 91 3 0 chr18 4882930 4883226 -81105708 + AluSx SINE Alu 1 297 -15 185 65 32 0 chr18 4883371 4883402 -81105532 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2107 90 10 14 chr18 4883725 4884014 -81104920 + AluSq SINE Alu 13 300 -13 404 263 78 60 chr18 4884034 4884238 -81104696 + L1MC4a LINE L1 5744 5956 -165 1486 158 3 89 chr18 4884238 4884554 -81104380 + AluJo SINE Alu 1 289 -23 404 263 78 60 chr18 4884554 4884566 -81104368 + L1MC4a LINE L1 5956 5966 -155 2106 200 58 40 chr18 4884622 4885118 -81103816 + MLT1D LTR MaLR 1 505 0 22 35 0 0 chr18 4885219 4885248 -81103686 + AT_rich Low_complexity Low_complexity 1 29 0 2209 101 16 10 chr18 4885278 4885584 -81103350 + AluSx SINE Alu 1 308 -4 233 325 94 17 chr18 4885688 4885805 -81103129 - L2 LINE L2 -226 3046 2921 925 102 8 0 chr18 4885990 4886134 -81102800 + FLAM_C SINE Alu 1 145 0 2285 102 0 0 chr18 4886913 4887207 -81101727 - AluSq SINE Alu -19 294 1 1677 174 25 11 chr18 4888279 4888561 -81100373 + AluJb SINE Alu 1 286 -26 22 35 0 0 chr18 4888561 4888590 -81100344 + AT_rich Low_complexity Low_complexity 1 29 0 239 0 32 0 chr18 4888608 4888639 -81100295 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 680 237 96 0 chr18 4889447 4889624 -81099310 + L1ME3A LINE L1 5918 6111 -59 2059 197 75 75 chr18 4889624 4889724 -81099210 - LTR48B LTR ERV1 0 644 545 2197 147 132 8 chr18 4889724 4890104 -81098830 - MSTA LTR MaLR 0 428 2 2059 197 75 75 chr18 4890104 4890647 -81098287 - LTR48B LTR ERV1 -98 546 1 27 0 0 0 chr18 4892239 4892266 -81096668 + AT_rich Low_complexity Low_complexity 1 27 0 650 217 130 0 chr18 4892499 4892658 -81096276 - MER5A DNA MER1_type -6 183 1 218 245 38 19 chr18 4892668 4892721 -81096213 - MER5B DNA MER1_type -71 107 54 23 0 0 0 chr18 4892721 4892744 -81096190 + AT_rich Low_complexity Low_complexity 1 23 0 973 104 11 27 chr18 4892883 4892957 -81095977 + (GAAA)n Simple_repeat Simple_repeat 1 252 0 973 104 11 27 chr18 4892957 4893140 -81095794 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 402 266 112 18 chr18 4893528 4893697 -81095237 + MIR3 SINE MIR 23 207 -1 21 0 0 0 chr18 4895395 4895416 -81093518 + AT_rich Low_complexity Low_complexity 1 21 0 9921 204 78 30 chr18 4895416 4899513 -81089421 - L1MD1 LINE L1 0 6636 2363 2280 101 3 3 chr18 4899513 4899811 -81089123 - AluSq SINE Alu -12 301 4 9921 204 78 30 chr18 4899811 4899919 -81089015 - L1MD1 LINE L1 -4273 2363 2262 2431 74 6 13 chr18 4899936 4900247 -81088687 + AluY SINE Alu 1 309 -2 350 362 172 13 chr18 4900566 4901096 -81087838 + L3 LINE CR1 75 688 -889 272 192 80 113 chr18 4901167 4901318 -81087616 + MIR SINE MIR 117 262 0 2170 119 7 0 chr18 4901403 4901705 -81087229 + AluSq SINE Alu 1 304 -9 2307 144 59 30 chr18 4901841 4902358 -81086576 - MLT2A2 LTR ERVL 0 554 1 625 331 70 7 chr18 4902376 4902678 -81086256 + L3 LINE CR1 982 1302 -275 3068 167 22 13 chr18 4903443 4903491 -81085443 + L1MB3 LINE L1 5629 5675 -508 2352 110 0 0 chr18 4903491 4903801 -81085133 + AluSg SINE Alu 1 310 0 3068 167 22 13 chr18 4903801 4904297 -81084637 + L1MB3 LINE L1 5675 6178 -5 190 246 123 0 chr18 4904350 4904407 -81084527 - MIR SINE MIR -82 180 117 331 308 21 56 chr18 4905194 4905337 -81083597 - L2 LINE L2 -3 3269 3132 202 331 130 43 chr18 4905380 4905634 -81083300 + L2 LINE L2 2866 3141 -131 309 290 21 11 chr18 4906986 4907079 -81081855 - MIR SINE MIR -57 151 58 6235 242 45 40 chr18 4907139 4907238 -81081696 - L1MCa LINE L1 -1979 4665 4568 2143 97 28 7 chr18 4907238 4907527 -81081407 - AluSg1 SINE Alu -10 299 5 6235 242 45 40 chr18 4907527 4907931 -81081003 - L1MCa LINE L1 -2076 4568 4168 2101 116 0 3 chr18 4907931 4908237 -81080697 - AluSg SINE Alu 0 305 1 6235 242 45 40 chr18 4908237 4909016 -81079918 - L1MCa LINE L1 -2476 4168 3394 1754 149 3 10 chr18 4909016 4909311 -81079623 + AluY SINE Alu 1 293 -18 6235 242 45 40 chr18 4909311 4910294 -81078640 - L1MCa LINE L1 -3250 3394 2396 2126 151 7 76 chr18 4910297 4910464 -81078470 - Tigger2 DNA MER2_type -2316 402 225 1822 108 10 61 chr18 4910464 4910759 -81078175 - AluSx SINE Alu -22 290 11 2126 151 7 76 chr18 4910759 4911023 -81077911 - Tigger2 DNA MER2_type -2493 225 1 1033 154 6 34 chr18 4911023 4911065 -81077869 - MER2 DNA MER2_type -177 168 126 1781 185 3 10 chr18 4911065 4911367 -81077567 + AluJb SINE Alu 1 300 -12 1033 154 6 34 chr18 4911367 4911495 -81077439 - MER2 DNA MER2_type -219 126 3 1515 250 170 39 chr18 4911540 4912257 -81076677 - L1MCa LINE L1 -5667 875 65 844 207 32 65 chr18 4912308 4912554 -81076380 + L1MD1 LINE L1 5636 5873 -369 * 1239 133 19 14 chr18 4912356 4912557 -81076377 + L1MB8 LINE L1 5675 5879 -299 868 175 13 32 chr18 4912557 4912711 -81076223 + FRAM SINE Alu 1 151 -15 1882 151 0 4 chr18 4962803 4963081 -81025853 - AluJb SINE Alu -35 277 1 409 305 70 38 chr18 4963569 4963956 -81024978 - MLT1L LTR MaLR -167 421 5 432 158 26 0 chr18 4964688 4964764 -81024170 + MER45B DNA AcHobo 503 580 -460 336 300 30 0 chr18 4964908 4965008 -81023926 + MER45 DNA AcHobo 1 103 -1478 * 986 100 0 0 chr18 4964999 4965129 -81023805 - Tigger1 DNA MER2_type -337 2081 1952 262 86 0 0 chr18 4965129 4965164 -81023770 + THE1A LTR MaLR 1 35 -320 2457 70 3 0 chr18 4965164 4965462 -81023472 - AluSc SINE Alu -10 299 1 237 183 139 35 chr18 4965517 4965632 -81023302 + Charlie7 DNA MER1_type 2473 2599 -13 * 296 100 0 0 chr18 4965627 4965667 -81023267 - Alu SINE Alu -262 40 1 * 1720 88 74 57 chr18 4965667 4965943 -81022991 + THE1B LTR MaLR 28 308 -56 2085 110 3 3 chr18 4965943 4966245 -81022689 + AluSq SINE Alu 1 302 0 2337 98 3 0 chr18 4966249 4966556 -81022378 + AluSx SINE Alu 1 308 -4 244 273 64 36 chr18 4967288 4967398 -81021536 - MIR SINE MIR -54 208 96 1825 162 7 20 chr18 4967442 4967739 -81021195 - AluSx SINE Alu -19 293 1 1571 133 58 55 chr18 4967912 4968036 -81020898 + AluJo SINE Alu 1 123 -189 2290 93 7 0 chr18 4968036 4968327 -81020607 - AluSp SINE Alu -20 293 1 1571 133 58 55 chr18 4968327 4968495 -81020439 + AluJo SINE Alu 123 294 -18 237 277 152 0 chr18 4970060 4970172 -81018762 + MIR SINE MIR 74 202 -60 26 30 0 0 chr18 4970187 4970220 -81018714 + AT_rich Low_complexity Low_complexity 1 33 0 2096 128 7 0 chr18 4970341 4970630 -81018304 - AluSx SINE Alu -21 291 1 513 95 74 32 chr18 4970663 4970758 -81018176 - L1MA8 LINE L1 -3 6288 6190 2500 36 0 0 chr18 4970825 4971146 -81017788 - AluY SINE Alu 0 321 1 1502 134 0 0 chr18 4971156 4971365 -81017569 - AluJo SINE Alu -20 292 84 1788 171 18 0 chr18 4971464 4971745 -81017189 + AluJo SINE Alu 1 286 -26 2185 118 0 13 chr18 4972131 4972437 -81016497 + AluSx SINE Alu 1 302 -10 315 296 123 25 chr18 4973376 4973538 -81015396 + MER5B DNA MER1_type 1 178 0 1720 280 98 40 chr18 4973573 4975416 -81013518 + L1ME LINE L1 10 1984 -4277 2023 140 0 13 chr18 4975468 4975776 -81013158 + AluSx SINE Alu 1 304 -8 26 50 0 0 chr18 4975857 4975897 -81013037 + AT_rich Low_complexity Low_complexity 1 40 0 499 205 173 8 chr18 4975903 4976162 -81012772 + L1ME LINE L1 1956 2255 -3825 22 0 0 0 chr18 4978053 4978075 -81010859 + AT_rich Low_complexity Low_complexity 1 22 0 2202 96 7 7 chr18 4980943 4981245 -81007689 + AluSx SINE Alu 1 302 -10 264 167 0 0 chr18 4981245 4981293 -81007641 + GA-rich Low_complexity Low_complexity 1 48 0 823 186 0 0 chr18 4981319 4981448 -81007486 + FRAM SINE Alu 24 152 -24 906 124 0 16 chr18 4981881 4982010 -81006924 + FLAM_C SINE Alu 1 127 -6 586 205 0 26 chr18 4982072 4982189 -81006745 - L1MB8 LINE L1 -1 6177 6064 2107 122 27 3 chr18 4982202 4982497 -81006437 - AluSx SINE Alu -10 302 1 2322 99 6 6 chr18 4982781 4983094 -81005840 - AluSq SINE Alu 0 313 1 1627 151 10 30 chr18 4983204 4983509 -81005425 - AluSx SINE Alu -13 299 1 996 234 5 59 chr18 4983512 4983756 -81005178 + L1 LINE L1 4847 5170 -976 2296 98 3 19 chr18 4983756 4984072 -81004862 + AluSx SINE Alu 1 311 -1 996 234 5 59 chr18 4984072 4984230 -81004704 + L1 LINE L1 5170 5335 -811 2487 58 0 3 chr18 4984230 4984525 -81004409 + AluY SINE Alu 1 294 -17 214 208 19 0 chr18 4984558 4984611 -81004323 + A-rich Low_complexity Low_complexity 1 54 0 757 117 155 82 chr18 4984755 4984961 -81003973 + AluJo SINE Alu 80 300 -12 381 281 58 0 chr18 4984964 4985085 -81003849 - MER39 LTR ERV1 -320 387 260 243 164 68 82 chr18 4985068 4985141 -81003793 - LTR48B LTR ERV1 -552 92 21 * 1787 190 7 0 chr18 4985485 4985785 -81003149 + AluJo SINE Alu 1 302 -10 207 69 0 0 chr18 4986086 4986115 -81002819 + (A)n Simple_repeat Simple_repeat 1 29 0 255 103 0 0 chr18 4987930 4987969 -81000965 + (CA)n Simple_repeat Simple_repeat 2 40 0 419 215 140 79 chr18 4988237 4988465 -81000469 - MER112 DNA MER1_type -10 250 9 205 217 98 98 chr18 4989156 4989248 -80999686 + MIR3 SINE MIR 103 194 -14 260 180 0 0 chr18 4989261 4989311 -80999623 - MIR SINE MIR -91 117 68 301 212 50 10 chr18 4990170 4990269 -80998665 + L1ME4a LINE L1 6017 6119 -2 2077 93 35 14 chr18 4990330 4990620 -80998314 - AluSq SINE Alu -17 296 1 1405 154 157 11 chr18 4990678 4990945 -80997989 - AluJo SINE Alu -6 306 1 405 263 97 51 chr18 4991199 4991537 -80997397 + MLT1L LTR MaLR 2 434 -181 1994 119 35 0 chr18 4991537 4991822 -80997112 + AluSp SINE Alu 1 295 -18 405 263 97 51 chr18 4991822 4991939 -80996995 + MLT1L LTR MaLR 434 544 -71 289 205 51 51 chr18 4992046 4992124 -80996810 + LTR48B LTR ERV1 1 78 -566 621 168 199 37 chr18 4992126 4992287 -80996647 + MER39 LTR ERV1 284 470 -237 2120 91 33 0 chr18 4992330 4992605 -80996329 - AluSx SINE Alu -17 295 12 351 0 0 0 chr18 4992699 4992738 -80996196 + (TG)n Simple_repeat Simple_repeat 2 40 0 2440 87 0 3 chr18 4993049 4993359 -80995575 + AluY SINE Alu 1 309 -2 2227 89 36 17 chr18 4993373 4993675 -80995259 + AluSp SINE Alu 1 308 -5 326 78 0 20 chr18 4993789 4993840 -80995094 + (TTTC)n Simple_repeat Simple_repeat 3 52 0 2299 101 7 0 chr18 4993842 4994149 -80994785 - AluSp SINE Alu -4 309 1 1715 74 283 179 chr18 4994439 4994913 -80994021 - LTR12 LTR ERV1 -133 581 59 277 211 0 0 chr18 4994915 4994967 -80993967 - LTR30 LTR ERV1 -670 52 1 2146 107 21 0 chr18 4994973 4995264 -80993670 + AluSq SINE Alu 2 298 -15 560 221 8 30 chr18 4995703 4995834 -80993100 + FLAM_A SINE Alu 1 128 -14 744 178 0 30 chr18 4996521 4996656 -80992278 - FLAM_C SINE Alu -11 132 2 1834 149 7 24 chr18 4997261 4997557 -80991377 + AluJo SINE Alu 1 291 -21 2167 118 0 0 chr18 4998364 4998653 -80990281 - AluSx SINE Alu -23 289 1 2095 131 3 3 chr18 5000963 5001260 -80987674 + AluSx SINE Alu 3 299 -13 1825 154 3 7 chr18 5001531 5001829 -80987105 - AluSg SINE Alu -13 297 1 371 251 74 0 chr18 5002357 5002483 -80986451 + MIR SINE MIR 13 143 -65 2251 102 0 7 chr18 5002503 5002807 -80986127 + AluSg SINE Alu 1 302 -8 246 62 0 0 chr18 5002807 5002839 -80986095 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 394 86 0 0 chr18 5003663 5003721 -80985213 + L1MA2 LINE L1 6243 6300 -4 1014 160 0 0 chr18 5003755 5003911 -80985023 + FRAM SINE Alu 1 156 -10 364 171 86 0 chr18 5004223 5004293 -80984641 - AluJ/FRAM SINE Alu -2 300 225 1266 153 5 0 chr18 5004294 5004484 -80984450 - AluSx SINE Alu -121 191 1 235 278 51 51 chr18 5004596 5004772 -80984162 + MER104 DNA Tc2 5 180 0 1434 110 5 5 chr18 5004887 5005096 -80983838 - AluSq SINE Alu -2 311 103 817 88 0 0 chr18 5005173 5005275 -80983659 - AluSq SINE Alu -210 102 1 12395 121 15 21 chr18 5005276 5005900 -80983034 - Tigger1 DNA MER2_type -525 1893 1267 2220 89 7 0 chr18 5005900 5006181 -80982753 + AluY SINE Alu 15 297 -14 12395 121 15 21 chr18 5006181 5006867 -80982067 - Tigger1 DNA MER2_type -1151 1267 578 2233 106 0 10 chr18 5006867 5007179 -80981755 + AluSx SINE Alu 1 309 -3 12395 121 15 21 chr18 5007179 5007547 -80981387 - Tigger1 DNA MER2_type -1840 578 225 2121 120 7 3 chr18 5007547 5007855 -80981079 + AluSg SINE Alu 1 309 -1 12395 121 15 21 chr18 5007855 5008066 -80980868 - Tigger1 DNA MER2_type -2193 225 14 486 167 31 0 chr18 5008083 5008179 -80980755 + MER45B DNA AcHobo 487 585 -455 805 151 14 142 chr18 5008285 5008497 -80980437 - AluJo SINE Alu -126 186 2 1212 262 40 51 chr18 5008596 5009149 -80979785 - HAL1 LINE L1 -1556 951 405 1041 280 21 15 chr18 5009165 5009497 -80979437 - HAL1 LINE L1 -2173 334 1 2338 108 3 0 chr18 5009916 5010223 -80978711 - AluSx SINE Alu -4 308 1 2342 78 3 0 chr18 5011919 5012230 -80976704 + AluSq SINE Alu 1 312 0 216 291 38 13 chr18 5012410 5012489 -80976445 - MIR SINE MIR -30 232 152 3607 170 67 6 chr18 5012521 5013222 -80975712 - L1MC1 LINE L1 -6 6327 5584 322 233 0 0 chr18 5013229 5013289 -80975645 + AluJ/FLAM SINE Alu 6 65 -237 3618 217 35 45 chr18 5013289 5013631 -80975303 - L1MCa LINE L1 -2851 3575 3231 2284 102 0 7 chr18 5013631 5013925 -80975009 + AluSg SINE Alu 2 293 -17 3618 217 35 45 chr18 5013925 5014113 -80974821 - L1MCa LINE L1 -3195 3231 3043 1543 122 9 5 chr18 5014113 5014334 -80974600 + AluSq SINE Alu 77 298 -15 3618 217 35 45 chr18 5014334 5014629 -80974305 - L1MCa LINE L1 -3383 3043 2746 1958 124 37 0 chr18 5014629 5014925 -80974009 - AluSx SINE Alu 0 306 1 3618 217 35 45 chr18 5014925 5015258 -80973676 - L1MCa LINE L1 -3680 2746 2426 3689 93 14 0 chr18 5015258 5015765 -80973169 + MER75 DNA T2_type 1 514 0 3618 217 35 45 chr18 5015765 5015846 -80973088 - L1MCa LINE L1 -4000 2426 2346 1864 149 10 3 chr18 5016032 5016327 -80972607 - AluSg SINE Alu -13 297 1 1889 132 10 20 chr18 5016327 5016629 -80972305 - AluSg SINE Alu -10 300 1 800 163 18 72 chr18 5017199 5017224 -80971710 + Tigger1 DNA MER2_type 1 26 -2392 2192 98 0 7 chr18 5017224 5017532 -80971402 - AluSq SINE Alu 0 307 2 800 163 18 72 chr18 5017532 5017671 -80971263 + Tigger1 DNA MER2_type 26 157 -2261 2133 103 38 3 chr18 5017679 5017969 -80970965 - AluSq SINE Alu -13 300 1 202 232 29 43 chr18 5017992 5018061 -80970873 + MIR SINE MIR 16 83 -125 628 235 48 88 chr18 5018081 5018496 -80970438 - MLT1F LTR MaLR -15 527 105 2037 118 3 34 chr18 5018496 5018818 -80970116 - AluJb SINE Alu 0 312 1 628 235 48 88 chr18 5018818 5018851 -80970083 - MLT1F LTR MaLR -437 105 72 320 329 79 0 chr18 5018909 5019049 -80969885 + MER58B DNA MER1_type 191 341 0 367 186 0 0 chr18 5019053 5019112 -80969822 - MLT1F LTR MaLR -533 62 4 2298 110 0 3 chr18 5020065 5020374 -80968560 + AluSx SINE Alu 2 309 -3 1797 143 26 4 chr18 5020493 5020765 -80968169 + AluJo SINE Alu 17 294 -18 1910 147 7 0 chr18 5020772 5021064 -80967870 + AluSx SINE Alu 1 294 -18 1232 241 78 8 chr18 5021080 5021441 -80967493 + MER45B DNA AcHobo 653 1038 -2 2339 117 0 0 chr18 5021676 5021984 -80966950 - AluSx SINE Alu -4 308 1 1954 125 0 60 chr18 5022483 5022802 -80966132 - AluSx SINE Alu -12 300 1 258 333 63 0 chr18 5023043 5023154 -80965780 - MIR3 SINE MIR -14 194 77 2252 64 0 4 chr18 5023372 5023636 -80965298 + AluSg SINE Alu 1 263 -47 2296 97 0 13 chr18 5023750 5024049 -80964885 - AluSq SINE Alu -18 295 1 1665 192 10 3 chr18 5024772 5025079 -80963855 - AluJo SINE Alu -3 309 1 295 351 88 0 chr18 5025535 5025649 -80963285 + L2 LINE L2 3137 3260 -12 1860 221 11 0 chr18 5025750 5026108 -80962826 - MLT1A1 LTR MaLR -3 362 1 194 343 34 45 chr18 5026113 5026291 -80962643 + L3 LINE CR1 1383 1558 -19 21 0 0 0 chr18 5027193 5027214 -80961720 + AT_rich Low_complexity Low_complexity 1 21 0 410 154 64 0 chr18 5027219 5027297 -80961637 + L1MB4 LINE L1 6092 6174 -6 1738 144 18 25 chr18 5027312 5027651 -80961283 + AluJb SINE Alu 3 339 0 189 0 0 0 chr18 5027769 5027790 -80961144 + (A)n Simple_repeat Simple_repeat 1 21 0 1731 80 13 0 chr18 5027952 5028178 -80960756 - AluSc SINE Alu -80 229 1 21 0 0 0 chr18 5028178 5028199 -80960735 + AT_rich Low_complexity Low_complexity 1 21 0 1210 168 0 15 chr18 5028199 5028396 -80960538 - AluJo SINE Alu -30 282 89 2096 81 68 14 chr18 5028502 5028797 -80960137 - AluSq SINE Alu -2 311 1 3136 236 64 15 chr18 5028801 5029386 -80959548 - L1MEc LINE L1 -2851 3364 2708 1653 166 35 3 chr18 5029386 5029675 -80959259 - AluJb SINE Alu -14 298 1 3136 236 64 15 chr18 5029675 5030089 -80958845 - L1MEc LINE L1 -3507 2708 2316 1025 125 0 0 chr18 5030106 5030242 -80958692 - AluSq/x SINE Alu -177 136 1 614 213 45 25 chr18 5030242 5030444 -80958490 - L1MEc LINE L1 -4021 2375 2170 2138 131 0 16 chr18 5030517 5030830 -80958104 - AluSx SINE Alu -4 308 1 694 179 0 15 chr18 5030930 5031064 -80957870 + AluSg/x SINE Alu 154 285 -27 225 94 0 0 chr18 5031064 5031096 -80957838 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 1230 176 27 23 chr18 5031098 5031359 -80957575 + L1M4 LINE L1 2673 2934 -3212 394 262 7 65 chr18 5031354 5031402 -80957532 - L1PBa LINE L1 -4265 1951 1902 * 2025 146 7 0 chr18 5031402 5031710 -80957224 - AluSx SINE Alu -2 310 1 394 262 7 65 chr18 5031710 5031808 -80957126 - L1PBa LINE L1 -4314 1902 1800 207 0 0 0 chr18 5031808 5031831 -80957103 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 394 262 7 65 chr18 5031831 5031859 -80957075 - L1PBa LINE L1 -4416 1800 1590 * 1306 243 114 2 chr18 5031852 5032256 -80956678 - L1MEc LINE L1 -5926 470 22 2131 72 25 0 chr18 5032353 5032630 -80956304 + AluY SINE Alu 1 284 -27 1640 137 33 68 chr18 5032758 5032960 -80955974 - MLT1B LTR MaLR -94 296 88 1877 152 3 13 chr18 5032960 5033269 -80955665 + AluJo SINE Alu 1 306 -6 2332 89 0 0 chr18 5033275 5033600 -80955334 + AluSg SINE Alu 1 325 0 1640 137 33 68 chr18 5033600 5033696 -80955238 - MLT1B LTR MaLR -307 83 1 284 151 86 178 chr18 5033701 5033853 -80955081 + HAL1 LINE L1 2109 2246 -261 1962 96 0 0 chr18 5033856 5034105 -80954829 + AluSg SINE Alu 1 249 -61 1886 128 44 17 chr18 5034836 5034952 -80953982 + AluSg SINE Alu 1 112 -198 396 0 0 0 chr18 5034952 5034996 -80953938 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1886 128 44 17 chr18 5034996 5035176 -80953758 + AluSg SINE Alu 112 305 -5 2266 110 13 0 chr18 5035366 5035665 -80953269 - AluSx SINE Alu -9 303 1 23 0 0 0 chr18 5036009 5036032 -80952902 + AT_rich Low_complexity Low_complexity 1 23 0 498 276 126 0 chr18 5037776 5037990 -80950944 + MIR SINE MIR 21 261 -1 248 53 26 0 chr18 5038907 5038945 -80949989 + (TTTTG)n Simple_repeat Simple_repeat 3 41 0 810 127 0 0 chr18 5039249 5039359 -80949575 - FLAM_C SINE Alu -33 110 1 2385 136 20 17 chr18 5040490 5040896 -80948038 - L1MB1 LINE L1 0 6168 5762 653 219 126 0 chr18 5040922 5041073 -80947861 - FAM SINE Alu -5 170 1 300 276 26 26 chr18 5045107 5045223 -80943711 - MIR SINE MIR -75 133 18 2258 104 0 13 chr18 5045332 5045630 -80943304 + AluSx SINE Alu 1 294 -18 351 0 0 0 chr18 5047354 5047393 -80941541 + (TG)n Simple_repeat Simple_repeat 2 40 0 185 258 86 32 chr18 5048289 5048382 -80940552 + L3b LINE CR1 1278 1375 -208 1070 217 21 0 chr18 5048830 5049065 -80939869 + MIR SINE MIR 13 252 -10 240 35 0 0 chr18 5049072 5049101 -80939833 + (TTA)n Simple_repeat Simple_repeat 3 31 0 196 298 119 0 chr18 5049185 5049269 -80939665 - MIR SINE MIR -137 125 32 579 255 117 27 chr18 5049479 5049889 -80939045 - L1MC4a LINE L1 -302 5819 5536 297 128 0 0 chr18 5049962 5050009 -80938925 + (A)n Simple_repeat Simple_repeat 1 47 0 2143 118 3 3 chr18 5051828 5052132 -80936802 - AluSx SINE Alu -8 304 1 2069 105 7 24 chr18 5053740 5054035 -80934899 + AluSc SINE Alu 1 290 -19 180 0 0 0 chr18 5054138 5054158 -80934776 + (T)n Simple_repeat Simple_repeat 1 20 0 4206 172 42 49 chr18 5054311 5055262 -80933672 + L1MB5 LINE L1 5211 6168 -6 756 198 11 6 chr18 5055270 5055447 -80933487 + L1M4 LINE L1 3839 4016 -2130 948 147 6 19 chr18 5055472 5055629 -80933305 + AluJb SINE Alu 1 155 -157 462 208 10 0 chr18 5055647 5055743 -80933191 + L1M4 LINE L1 4028 4124 -2022 1927 153 0 7 chr18 5055744 5056038 -80932896 + AluSx SINE Alu 1 292 -20 269 298 40 16 chr18 5056077 5056201 -80932733 - HAL1 LINE L1 -6 2501 2375 2483 87 0 3 chr18 5056311 5056621 -80932313 - AluSp SINE Alu -4 309 1 2217 112 7 0 chr18 5056621 5056916 -80932018 - AluSq SINE Alu -16 297 1 298 263 15 60 chr18 5057038 5057171 -80931763 + LTR33A LTR ERVL 377 503 -20 553 236 26 77 chr18 5057740 5057935 -80930999 - MIR SINE MIR -8 254 70 2438 85 0 0 chr18 5058115 5058409 -80930525 - AluSc SINE Alu -15 294 1 462 280 83 0 chr18 5058470 5058627 -80930307 + MIR SINE MIR 48 217 -45 24 0 0 0 chr18 5058794 5058818 -80930116 + AT_rich Low_complexity Low_complexity 1 24 0 476 151 0 0 chr18 5058899 5058972 -80929962 + L1MB3 LINE L1 6072 6144 -39 2194 113 3 0 chr18 5058973 5059264 -80929670 - AluSp SINE Alu -21 292 1 195 42 0 0 chr18 5060251 5060275 -80928659 + (GGA)n Simple_repeat Simple_repeat 3 26 0 12032 116 30 41 chr18 5061632 5062087 -80926847 - Tigger1 DNA MER2_type -455 1963 1505 958 65 26 85 chr18 5062087 5062240 -80926694 - L1MA1 LINE L1 -4 6298 6155 12032 116 30 41 chr18 5062240 5062385 -80926549 - Tigger1 DNA MER2_type -913 1505 1360 2052 142 47 39 chr18 5062385 5062745 -80926189 - THE1B LTR MaLR -1 363 1 12032 116 30 41 chr18 5062745 5063373 -80925561 - Tigger1 DNA MER2_type -1058 1360 727 1415 118 6 68 chr18 5063373 5063694 -80925240 + AluSq SINE Alu 1 301 -12 12032 116 30 41 chr18 5063694 5064447 -80924487 - Tigger1 DNA MER2_type -1691 727 1 1195 198 12 130 chr18 5065393 5065757 -80923177 + MLT1A1 LTR MaLR 1 312 -53 1185 58 0 13 chr18 5065757 5065912 -80923022 + L1PA8 LINE L1 6016 6168 -4 1195 198 12 130 chr18 5065912 5065961 -80922973 + MLT1A1 LTR MaLR 312 365 0 1935 173 65 8 chr18 5066262 5066631 -80922303 + MLT1B LTR MaLR 1 390 0 223 279 0 0 chr18 5067947 5068008 -80920926 + T-rich Low_complexity Low_complexity 1 61 0 271 280 65 9 chr18 5069323 5069430 -80919504 + MIR SINE MIR 34 146 -62 423 160 0 0 chr18 5069466 5069541 -80919393 + T-rich Low_complexity Low_complexity 1 75 0 207 69 0 0 chr18 5069680 5069709 -80919225 + (A)n Simple_repeat Simple_repeat 1 29 0 1032 101 78 33 chr18 5069720 5069969 -80918965 - L1MCa LINE L1 -4553 1873 1525 936 152 63 0 chr18 5070023 5070181 -80918753 - THE1B LTR MaLR -2 362 195 2318 80 7 3 chr18 5070190 5070476 -80918458 + AluSq SINE Alu 3 289 -24 21 0 0 0 chr18 5070476 5070497 -80918437 + AT_rich Low_complexity Low_complexity 1 21 0 363 240 0 0 chr18 5070500 5070575 -80918359 + FLAM_A SINE Alu 23 97 -36 1284 152 15 0 chr18 5070575 5070779 -80918155 + THE1B LTR MaLR 1 207 -157 207 0 0 0 chr18 5070779 5070802 -80918132 + (T)n Simple_repeat Simple_repeat 1 23 0 1819 118 0 8 chr18 5070934 5071189 -80917745 - AluSx SINE Alu -59 253 1 4183 149 4 20 chr18 5071739 5072455 -80916479 - L1MB3 LINE L1 -2 6181 5477 234 91 0 0 chr18 5073040 5073073 -80915861 + (A)n Simple_repeat Simple_repeat 1 33 0 2171 131 0 10 chr18 5074849 5075161 -80913773 + AluSx SINE Alu 1 309 -3 1095 100 0 0 chr18 5075267 5075407 -80913527 - AluSg/x SINE Alu -36 276 137 2106 108 63 18 chr18 5075702 5076035 -80912899 - Tigger1 DNA MER2_type 0 2418 2071 825 138 8 0 chr18 5076048 5076178 -80912756 - FLAM_C SINE Alu -12 131 1 1040 90 7 7 chr18 5076178 5076323 -80912611 - Tigger1 DNA MER2_type -324 2094 1950 2283 61 7 3 chr18 5076325 5076622 -80912312 + AluY SINE Alu 1 298 -13 1496 187 3 7 chr18 5076633 5076922 -80912012 + AluJo SINE Alu 1 288 -24 911 124 0 16 chr18 5077355 5077484 -80911450 + FLAM_C SINE Alu 1 127 -6 581 205 0 26 chr18 5077546 5077663 -80911271 - L1MB8 LINE L1 -1 6177 6064 1968 119 31 3 chr18 5077676 5077970 -80910964 - AluSx SINE Alu -10 302 1 1688 152 7 20 chr18 5077969 5078272 -80910662 - AluJb SINE Alu 0 312 14 * 1839 140 17 0 chr18 5078284 5078584 -80910350 - AluJb SINE Alu -7 305 1 2184 81 37 0 chr18 5080794 5081091 -80907843 - AluSx SINE Alu -4 308 1 526 294 47 6 chr18 5081304 5081474 -80907460 - MIR SINE MIR -17 245 69 2220 103 3 0 chr18 5081493 5081803 -80907131 + AluSx SINE Alu 1 311 -1 2222 88 0 3 chr18 5082192 5082489 -80906445 + AluY SINE Alu 1 296 -15 1290 161 8 46 chr18 5082620 5082808 -80906126 - AluJb SINE Alu -19 293 116 2611 130 20 10 chr18 5082808 5083207 -80905727 - MER57A LTR ERV1 0 403 1 1290 161 8 46 chr18 5083207 5083278 -80905656 - AluJb SINE Alu -196 116 44 330 163 0 0 chr18 5083429 5083478 -80905456 - AluJb SINE Alu -253 49 1 757 204 60 0 chr18 5083501 5083668 -80905266 - MER5A DNA MER1_type -12 177 1 2140 98 0 0 chr18 5083741 5084053 -80904881 + AluSq SINE Alu 1 312 0 1850 188 81 77 chr18 5084103 5084597 -80904337 - MLT1D LTR MaLR -8 497 2 981 184 11 6 chr18 5084618 5084792 -80904142 + FAM SINE Alu 1 175 0 1428 157 73 7 chr18 5085371 5085645 -80903289 - MLT1B LTR MaLR 0 390 99 2356 58 0 3 chr18 5085645 5085940 -80902994 - AluY SINE Alu -17 294 1 1883 176 17 6 chr18 5085950 5086309 -80902625 - L1PA16 LINE L1 0 6166 5804 2143 113 0 7 chr18 5086482 5086791 -80902143 - AluSx SINE Alu -5 307 1 216 0 0 0 chr18 5086888 5086912 -80902022 + (CA)n Simple_repeat Simple_repeat 2 25 0 1951 132 3 0 chr18 5086966 5087253 -80901681 + AluSx SINE Alu 1 288 -24 394 292 28 16 chr18 5087253 5087402 -80901532 - L1MC4 LINE L1 -1139 6646 6513 331 252 107 10 chr18 5087403 5087506 -80901428 - L1MC4 LINE L1 -1339 6703 6591 494 92 0 0 chr18 5087582 5087647 -80901287 + AluS SINE Alu 2 66 -247 28 0 0 0 chr18 5088503 5088531 -80900403 + AT_rich Low_complexity Low_complexity 1 28 0 1948 115 0 14 chr18 5088538 5088826 -80900108 + AluJb SINE Alu 1 284 -28 263 253 0 11 chr18 5090613 5090704 -80898230 + GA-rich Low_complexity Low_complexity 2 91 0 2554 23 3 0 chr18 5092557 5092859 -80896075 - AluY SINE Alu -8 303 1 558 134 0 0 chr18 5093213 5093295 -80895639 - AluJ/FLAM SINE Alu -229 83 2 2120 112 0 0 chr18 5093725 5094020 -80894914 + AluSc SINE Alu 1 295 -14 1941 132 7 13 chr18 5094031 5094335 -80894599 + AluSx SINE Alu 1 302 -10 270 291 143 11 chr18 5094522 5094711 -80894223 - L2 LINE L2 -223 3049 2836 2359 39 0 29 chr18 5095308 5095614 -80893320 + AluY SINE Alu 1 297 -14 269 271 77 44 chr18 5096635 5096908 -80892026 - L1ME4a LINE L1 -116 6005 5724 2107 102 0 23 chr18 5097326 5097630 -80891304 - AluSc SINE Alu -12 297 1 317 331 85 99 chr18 5097665 5097958 -80890976 + L1ME3A LINE L1 360 648 -5557 2159 95 0 7 chr18 5098147 5098452 -80890482 + AluSq SINE Alu 5 307 -6 301 303 53 90 chr18 5098633 5098672 -80890262 + L1ME3A LINE L1 1858 1897 -4499 1441 168 66 3 chr18 5098672 5098958 -80889976 + AluJb SINE Alu 4 307 -5 301 303 53 90 chr18 5098958 5098972 -80889962 + L1ME3A LINE L1 1897 1910 -4486 1792 168 3 0 chr18 5098972 5099270 -80889664 - AluJb SINE Alu -5 307 9 301 303 53 90 chr18 5099270 5099459 -80889475 + L1ME3A LINE L1 1910 2092 -4304 1987 131 0 10 chr18 5099460 5099772 -80889162 + AluSx SINE Alu 1 309 -3 540 293 105 27 chr18 5099783 5100186 -80888748 + L1ME3A LINE L1 4602 5037 -1173 1458 216 50 65 chr18 5100186 5100710 -80888224 - MLT2B1 LTR ERVL 0 520 5 280 257 22 5 chr18 5100879 5101002 -80887932 + L1ME3A LINE L1 5416 5542 -697 2336 42 0 3 chr18 5101003 5101335 -80887599 - AluY SINE Alu 0 331 1 758 173 0 8 chr18 5101337 5101464 -80887470 - AluJ SINE Alu -6 306 181 623 147 174 0 chr18 5101466 5101575 -80887359 - AluJ SINE Alu -174 128 1 679 259 112 48 chr18 5101579 5102042 -80886892 + L1ME3A LINE L1 5539 6031 -208 1977 142 7 0 chr18 5102237 5102539 -80886395 + AluSx SINE Alu 1 304 -8 836 91 25 0 chr18 5102549 5102670 -80886264 + AluSq/x SINE Alu 1 124 -188 1219 232 71 53 chr18 5102771 5102851 -80886083 + MER39 LTR ERV1 305 382 -325 1397 129 91 45 chr18 5102851 5103138 -80885796 - AluJo SINE Alu -12 300 1 1219 232 71 53 chr18 5103138 5103453 -80885481 + MER39 LTR ERV1 382 707 0 246 207 0 0 chr18 5104241 5104299 -80884635 + (TA)n Simple_repeat Simple_repeat 2 59 0 213 39 0 0 chr18 5104353 5104379 -80884555 + (T)n Simple_repeat Simple_repeat 1 26 0 1782 150 3 16 chr18 5104553 5104860 -80884074 - AluJb SINE Alu -9 303 1 436 349 143 16 chr18 5105373 5105688 -80883246 - L3 LINE CR1 -23 1554 1200 1267 154 60 82 chr18 5105692 5106011 -80882923 - AluJb SINE Alu 0 312 1 1005 212 101 42 chr18 5106287 5106436 -80882498 - MER5C DNA MER1_type 0 324 185 216 0 0 0 chr18 5106436 5106460 -80882474 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1005 212 101 42 chr18 5106460 5106523 -80882411 - MER5C DNA MER1_type -139 185 127 1946 115 0 59 chr18 5106523 5106844 -80882090 - AluSq SINE Alu -11 302 1 1005 212 101 42 chr18 5106844 5106936 -80881998 - MER5C DNA MER1_type -197 127 1 678 224 28 65 chr18 5106949 5107163 -80881771 + MER63A DNA MER1_type 5 210 0 1978 131 3 0 chr18 5107207 5107504 -80881430 + AluSq SINE Alu 1 298 -15 29 47 0 0 chr18 5107822 5107865 -80881069 + AT_rich Low_complexity Low_complexity 1 43 0 2033 127 3 19 chr18 5108201 5108516 -80880418 - AluSx SINE Alu -2 310 1 2255 89 0 3 chr18 5108608 5108912 -80880022 - AluSc SINE Alu 0 309 7 2199 88 3 0 chr18 5108946 5109240 -80879694 - AluSp SINE Alu -18 295 1 1726 74 283 179 chr18 5109530 5110004 -80878930 - LTR12 LTR ERV1 -133 581 59 282 211 0 0 chr18 5110006 5110058 -80878876 - LTR30 LTR ERV1 -670 52 1 2028 107 21 0 chr18 5110064 5110355 -80878579 + AluSq SINE Alu 2 298 -15 568 221 8 30 chr18 5110795 5110926 -80878008 + FLAM_A SINE Alu 1 128 -14 751 178 0 30 chr18 5111620 5111755 -80877179 - FLAM_C SINE Alu -11 132 2 1715 149 7 24 chr18 5112360 5112656 -80876278 + AluJo SINE Alu 1 291 -21 426 224 138 78 chr18 5113269 5113501 -80875433 - MER112 DNA MER1_type -6 254 9 242 217 98 98 chr18 5114191 5114283 -80874651 + MIR3 SINE MIR 103 194 -14 280 180 8 0 chr18 5114296 5114352 -80874582 - MIR SINE MIR -91 117 57 294 212 50 10 chr18 5115205 5115304 -80873630 + L1ME4a LINE L1 6017 6119 -2 1956 93 35 14 chr18 5115365 5115655 -80873279 - AluSq SINE Alu -17 296 1 1307 161 157 4 chr18 5115713 5115980 -80872954 - AluJo SINE Alu -4 308 1 410 265 59 53 chr18 5116234 5116572 -80872362 + MLT1L LTR MaLR 2 411 -204 1821 122 35 3 chr18 5116572 5116859 -80872075 + AluSp SINE Alu 1 296 -17 410 265 59 53 chr18 5116859 5116890 -80872044 + MLT1L LTR MaLR 411 440 -175 290 205 51 51 chr18 5117081 5117159 -80871775 + LTR48B LTR ERV1 1 78 -566 627 168 199 37 chr18 5117161 5117322 -80871612 + MER39 LTR ERV1 284 470 -237 2016 105 31 0 chr18 5117365 5117651 -80871283 - AluSx SINE Alu -17 295 1 1117 148 0 21 chr18 5117679 5117868 -80871066 - AluJo SINE Alu -125 187 3 514 231 15 15 chr18 5117871 5118005 -80870929 + MER39 LTR ERV1 554 687 -20 431 279 81 12 chr18 5118033 5118194 -80870740 + MIR SINE MIR 44 215 -47 2350 82 0 22 chr18 5118299 5118618 -80870316 + AluSq SINE Alu 1 312 -1 1736 142 137 57 chr18 5118670 5119071 -80869863 + LTR49 LTR ERV1 3 435 -160 1618 150 17 27 chr18 5119076 5119376 -80869558 + AluSx SINE Alu 1 297 -15 955 136 7 0 chr18 5119519 5119666 -80869268 + FRAM SINE Alu 11 158 -18 635 185 0 0 chr18 5120609 5120717 -80868217 + FLAM_A SINE Alu 12 119 -23 406 292 15 51 chr18 5120731 5120926 -80868008 + MIR SINE MIR 49 236 -26 2059 95 20 10 chr18 5121366 5121661 -80867273 - AluSq SINE Alu -15 298 1 1521 142 24 24 chr18 5121858 5122147 -80866787 - AluJo SINE Alu -10 302 14 232 196 103 62 chr18 5122286 5122383 -80866551 + MIR SINE MIR 112 212 -50 2060 96 14 0 chr18 5122453 5122744 -80866190 - AluSq SINE Alu -18 295 1 861 39 10 0 chr18 5123114 5123218 -80865716 + AluSp SINE Alu 29 133 -180 226 259 0 0 chr18 5123345 5123399 -80865535 + A-rich Low_complexity Low_complexity 1 54 0 23 0 0 0 chr18 5123430 5123453 -80865481 + AT_rich Low_complexity Low_complexity 1 23 0 2143 121 0 3 chr18 5123453 5123766 -80865168 - AluSx SINE Alu 0 312 1 2032 114 0 10 chr18 5124706 5125004 -80863930 - AluSx SINE Alu -17 295 1 2016 121 7 23 chr18 5125004 5125310 -80863624 - AluSx SINE Alu -10 302 1 831 171 8 0 chr18 5125425 5125554 -80863380 + FLAM_A SINE Alu 1 130 -3 183 315 235 13 chr18 5126255 5126404 -80862530 + MER5A DNA MER1_type 8 189 0 2153 137 0 3 chr18 5126673 5126986 -80861948 + AluSq SINE Alu 1 312 -1 39 15 0 46 chr18 5128165 5128230 -80860704 + AT_rich Low_complexity Low_complexity 1 62 0 1250 171 167 0 chr18 5128460 5128712 -80860222 - L1PB3 LINE L1 0 6154 5861 186 43 0 0 chr18 5128873 5128896 -80860038 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2314 100 3 0 chr18 5128916 5129217 -80859717 - AluSg SINE Alu -8 302 1 2022 136 13 7 chr18 5129227 5129535 -80859399 - AluSq SINE Alu -3 310 1 1197 68 17 6 chr18 5129545 5129722 -80859212 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2290 85 19 10 chr18 5129739 5130046 -80858888 - AluSg SINE Alu 0 310 1 2007 176 17 6 chr18 5130056 5130415 -80858519 - L1PA16 LINE L1 0 6166 5804 794 81 7 40 chr18 5130468 5130617 -80858317 + (GAA)n Simple_repeat Simple_repeat 1 144 0 2349 86 0 0 chr18 5130965 5131257 -80857677 - AluSg SINE Alu -18 292 1 3745 192 53 44 chr18 5131258 5131475 -80857459 + L1MCa LINE L1 1934 2148 -4278 2251 98 10 0 chr18 5131475 5131770 -80857164 + AluSg SINE Alu 1 298 -12 3745 192 53 44 chr18 5131770 5132022 -80856912 + L1MCa LINE L1 2148 2396 -4030 3864 93 14 0 chr18 5132022 5132529 -80856405 - MER75 DNA T2_type 0 514 1 3745 192 53 44 chr18 5132529 5132862 -80856072 + L1MCa LINE L1 2396 2725 -3701 1940 124 37 0 chr18 5132862 5133158 -80855776 + AluSx SINE Alu 1 306 0 3745 192 53 44 chr18 5133158 5133451 -80855483 + L1MCa LINE L1 2725 3014 -3412 1623 122 0 0 chr18 5133451 5133673 -80855261 - AluSq SINE Alu -15 298 77 3745 192 53 44 chr18 5133673 5133859 -80855075 + L1MCa LINE L1 3014 3197 -3229 2185 107 3 3 chr18 5133859 5134150 -80854784 - AluSg SINE Alu -18 292 2 3745 192 53 44 chr18 5134150 5134492 -80854442 + L1MCa LINE L1 3197 3575 -2851 320 233 0 0 chr18 5134492 5134552 -80854382 - AluJ/FLAM SINE Alu -237 65 6 3812 168 67 6 chr18 5134559 5135260 -80853674 + L1MC1 LINE L1 5584 6327 -6 237 291 38 13 chr18 5135292 5135371 -80853563 + MIR SINE MIR 152 232 -30 2317 78 3 0 chr18 5135551 5135862 -80853072 - AluSq SINE Alu 0 312 1 2282 108 7 0 chr18 5137558 5137865 -80851069 + AluSx SINE Alu 1 309 -3 1027 279 21 18 chr18 5138284 5138617 -80850317 + HAL1 LINE L1 1 334 -2173 1211 262 40 51 chr18 5138633 5139186 -80849748 + HAL1 LINE L1 405 951 -1556 1913 94 41 4 chr18 5139426 5139693 -80849241 - AluSp SINE Alu -36 277 1 27 62 0 0 chr18 5139736 5139784 -80849150 + AT_rich Low_complexity Low_complexity 1 48 0 755 266 105 4 chr18 5139909 5140138 -80848796 + MIR SINE MIR 4 255 -7 210 288 81 63 chr18 5140770 5140881 -80848053 - L2 LINE L2 0 3313 3201 2596 37 0 0 chr18 5140905 5141201 -80847733 + AluY SINE Alu 1 296 -15 276 237 101 79 chr18 5141283 5141422 -80847512 - LTR50 LTR ERVL -636 159 18 2370 58 0 0 chr18 5142356 5142684 -80846250 + AluY SINE Alu 7 334 0 308 297 94 25 chr18 5142876 5143236 -80845698 + L1ME4a LINE L1 2750 3134 -3012 1585 201 16 3 chr18 5143462 5143770 -80845164 + AluJo SINE Alu 1 312 0 2248 110 0 0 chr18 5143950 5144242 -80844692 - AluSq SINE Alu -19 294 3 302 314 42 8 chr18 5144248 5144366 -80844568 + L1ME4a LINE L1 3623 3744 -2402 25 0 0 0 chr18 5144386 5144411 -80844523 + AT_rich Low_complexity Low_complexity 1 25 0 460 255 0 0 chr18 5144420 5144522 -80844412 + U13 snRNA snRNA 1 102 -2 2146 119 0 7 chr18 5144714 5145039 -80843895 + AluSx SINE Alu 1 323 0 1046 67 0 0 chr18 5145259 5145393 -80843541 + AluSp/q SINE Alu 175 308 -5 2071 73 4 7 chr18 5145644 5145919 -80843015 + AluSc SINE Alu 1 274 -35 205 143 0 41 chr18 5145934 5145963 -80842971 + (TAAA)n Simple_repeat Simple_repeat 2 30 -18 1679 193 3 0 chr18 5145963 5146253 -80842681 + 7SLRNA srpRNA srpRNA 6 296 -24 205 143 0 41 chr18 5146253 5146272 -80842662 + (TAAA)n Simple_repeat Simple_repeat 30 48 0 304 276 19 108 chr18 5146284 5146498 -80842436 + L1ME4a LINE L1 4498 4692 -1454 2043 125 10 10 chr18 5146526 5146823 -80842111 - AluJo SINE Alu -15 297 1 1995 120 0 0 chr18 5146921 5147188 -80841746 + AluSx SINE Alu 31 297 -15 1762 151 35 111 chr18 5147257 5147627 -80841307 - Tigger3(Golem) DNA MER2_type -7 3022 1 236 328 38 27 chr18 5147982 5148165 -80840769 + L1ME4a LINE L1 5197 5381 -765 2214 93 4 0 chr18 5148172 5148477 -80840457 + AluSg SINE Alu 3 308 0 2394 76 0 0 chr18 5148484 5148774 -80840160 + AluY SINE Alu 1 290 -21 208 246 0 0 chr18 5148780 5148837 -80840097 + (TA)n Simple_repeat Simple_repeat 2 58 0 2091 120 7 0 chr18 5149271 5149563 -80839371 + AluSx SINE Alu 1 294 -18 388 0 39 0 chr18 5150375 5150427 -80838507 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 283 327 45 9 chr18 5150608 5150718 -80838216 + L2 LINE L2 3154 3267 -5 279 211 32 21 chr18 5151002 5151097 -80837837 + (TA)n Simple_repeat Simple_repeat 1 96 0 282 56 0 0 chr18 5151099 5151135 -80837799 - MADE1 DNA Mariner -44 36 1 417 289 113 32 chr18 5151163 5151474 -80837460 + L1ME4a LINE L1 5548 5883 -238 2375 81 0 25 chr18 5151597 5151917 -80837017 - AluSx SINE Alu 0 312 1 2154 87 4 4 chr18 5151917 5152194 -80836740 - AluSq SINE Alu -36 277 1 2235 102 0 7 chr18 5152489 5152792 -80836142 - AluSg SINE Alu -9 301 1 402 251 74 0 chr18 5152812 5152938 -80835996 - MIR SINE MIR -65 143 13 1808 154 3 7 chr18 5153466 5153764 -80835170 + AluSg SINE Alu 1 297 -13 2120 131 0 3 chr18 5154036 5154334 -80834600 - AluSx SINE Alu -13 299 3 21 57 0 0 chr18 5154843 5154878 -80834056 + AT_rich Low_complexity Low_complexity 1 35 0 2286 89 0 3 chr18 5156449 5156741 -80832193 + AluSg SINE Alu 5 295 -15 1762 151 35 111 chr18 5156810 5157180 -80831754 - Tigger3(Golem) DNA MER2_type -6 3023 1 236 328 38 27 chr18 5157535 5157718 -80831216 + L1ME4a LINE L1 5197 5381 -765 2214 93 4 0 chr18 5157725 5158030 -80830904 + AluSg SINE Alu 3 308 0 2441 82 0 0 chr18 5158037 5158341 -80830593 + AluY SINE Alu 1 304 -7 200 213 0 0 chr18 5158343 5158390 -80830544 + (TA)n Simple_repeat Simple_repeat 1 47 0 2056 119 7 3 chr18 5158825 5159118 -80829816 + AluSx SINE Alu 1 294 -18 388 0 39 0 chr18 5159930 5159982 -80828952 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 283 327 45 9 chr18 5160163 5160273 -80828661 + L2 LINE L2 3154 3267 -5 279 211 32 21 chr18 5160557 5160652 -80828282 + (TA)n Simple_repeat Simple_repeat 1 96 0 282 56 0 0 chr18 5160654 5160690 -80828244 - MADE1 DNA Mariner -44 36 1 404 293 113 32 chr18 5160718 5161029 -80827905 + L1ME4a LINE L1 5548 5883 -238 2291 85 0 31 chr18 5161152 5161471 -80827463 - AluSc SINE Alu 0 309 1 1984 117 7 7 chr18 5161583 5161873 -80827061 + AluSx SINE Alu 9 298 -14 612 201 67 15 chr18 5161924 5162058 -80826876 + MIR SINE MIR 12 152 -110 7303 154 38 53 chr18 5162079 5163256 -80825678 + L1MCa LINE L1 46 1198 -5228 2422 93 3 0 chr18 5163256 5163567 -80825367 + AluSp SINE Alu 1 312 -1 7303 154 38 53 chr18 5163567 5163898 -80825036 + L1MCa LINE L1 1198 1532 -4894 1701 184 10 3 chr18 5163898 5164218 -80824716 + AluJb SINE Alu 1 312 0 1265 135 24 10 chr18 5164234 5164485 -80824449 + AluSc SINE Alu 1 304 -5 192 267 139 0 chr18 5164775 5164861 -80824073 + MIR SINE MIR 117 214 -48 1492 138 84 22 chr18 5165026 5165301 -80823633 + AluSx SINE Alu 2 293 -19 2132 116 3 3 chr18 5165343 5165645 -80823289 + AluSx SINE Alu 1 302 -10 21 57 0 0 chr18 5165893 5165928 -80823006 + AT_rich Low_complexity Low_complexity 1 35 0 2255 91 0 10 chr18 5167499 5167797 -80821137 + AluSg SINE Alu 5 299 -11 802 171 0 8 chr18 5168467 5168590 -80820344 - FLAM_C SINE Alu -16 127 6 407 229 100 7 chr18 5168610 5168750 -80820184 - L1MA9 LINE L1 -30 6282 6130 638 104 9 87 chr18 5168779 5168894 -80820040 - L1MB1 LINE L1 -307 5882 5777 1534 201 6 32 chr18 5168895 5169209 -80819725 - AluJo SINE Alu -6 306 1 330 132 0 33 chr18 5169215 5169316 -80819618 - L1MB1 LINE L1 -791 5363 5270 2380 57 0 10 chr18 5169334 5169632 -80819302 - AluY SINE Alu -16 295 1 1009 235 2 59 chr18 5169632 5169790 -80819144 - L1 LINE L1 -811 5335 5170 2308 101 0 19 chr18 5169790 5170107 -80818827 - AluSx SINE Alu -1 311 1 1009 235 2 59 chr18 5170107 5170354 -80818580 - L1 LINE L1 -976 5170 4845 2041 132 17 0 chr18 5170355 5170651 -80818283 + AluSx SINE Alu 1 301 -11 402 134 0 0 chr18 5170850 5170917 -80818017 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 2279 90 37 10 chr18 5171031 5171331 -80817603 - AluSp SINE Alu -5 308 1 2382 90 0 3 chr18 5171345 5171655 -80817279 - AluY SINE Alu -2 309 1 369 0 0 0 chr18 5171967 5172008 -80816926 + (CA)n Simple_repeat Simple_repeat 2 42 0 1935 138 7 13 chr18 5172091 5172396 -80816538 + AluSx SINE Alu 4 306 -6 246 62 0 0 chr18 5172396 5172428 -80816506 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 409 86 0 0 chr18 5173252 5173310 -80815624 + L1MA1 LINE L1 6241 6298 -4 1081 160 0 0 chr18 5173344 5173500 -80815434 + FRAM SINE Alu 1 156 -10 361 171 86 0 chr18 5173812 5173882 -80815052 - AluJ/FRAM SINE Alu -2 300 225 1246 153 5 0 chr18 5173883 5174073 -80814861 - AluSx SINE Alu -121 191 1 253 278 51 51 chr18 5174185 5174361 -80814573 + MER104 DNA Tc2 5 180 0 2412 93 3 0 chr18 5174476 5174786 -80814148 - AluSp SINE Alu -2 311 1 264 229 135 31 chr18 5174787 5174883 -80814051 - L1MC5 LINE L1 -44 7917 7812 973 132 7 0 chr18 5174931 5175067 -80813867 + AluSq/x SINE Alu 3 139 -174 2220 74 7 7 chr18 5175199 5175519 -80813415 - AluSq SINE Alu 0 320 1 859 263 50 4 chr18 5175525 5175806 -80813128 + L1MC4a LINE L1 5693 5986 -1822 1324 134 38 0 chr18 5175902 5176111 -80812823 - AluJb SINE Alu -10 302 86 30 59 0 0 chr18 5176137 5176188 -80812746 + AT_rich Low_complexity Low_complexity 1 51 0 1817 161 38 0 chr18 5176919 5177210 -80811724 + AluJo SINE Alu 1 302 -10 381 75 0 0 chr18 5177445 5177498 -80811436 + (CA)n Simple_repeat Simple_repeat 2 54 0 1408 152 8 13 chr18 5178051 5178288 -80810646 - MER46A DNA MER2_type 0 236 1 284 298 61 61 chr18 5178441 5178622 -80810312 + MIR SINE MIR 79 259 -3 1265 261 60 24 chr18 5178696 5179113 -80809821 + L1MC4a LINE L1 5517 5948 -1860 272 91 23 0 chr18 5179113 5179157 -80809777 + (GAAA)n Simple_repeat Simple_repeat 4 48 0 2642 56 0 0 chr18 5179252 5179555 -80809379 + AluY SINE Alu 1 303 -8 1777 172 0 10 chr18 5179697 5179987 -80808947 - AluJo SINE Alu -13 299 13 2201 96 11 0 chr18 5180522 5180854 -80808080 + AluSq SINE Alu 1 335 0 23 0 0 0 chr18 5181203 5181226 -80807708 + AT_rich Low_complexity Low_complexity 1 23 0 1336 149 0 28 chr18 5181384 5181599 -80807335 + AluJo SINE Alu 89 297 -15 2186 89 10 0 chr18 5181612 5181903 -80807031 + AluSc SINE Alu 11 304 -5 1817 112 93 4 chr18 5182484 5182752 -80806182 + AluSx SINE Alu 2 293 -19 2028 120 0 0 chr18 5182789 5183065 -80805869 + AluSx SINE Alu 1 276 -36 2198 176 82 58 chr18 5283097 5283704 -80705230 - L1MC4 LINE L1 -773 7269 6648 210 191 0 0 chr18 5283752 5283799 -80705135 + (TA)n Simple_repeat Simple_repeat 2 48 0 420 224 212 73 chr18 5283849 5283968 -80704966 - L1MC4 LINE L1 -1191 6617 6529 1109 184 22 45 chr18 5283968 5284191 -80704743 + MER20 DNA MER1_type 2 219 0 420 224 212 73 chr18 5284191 5284314 -80704620 - L1MC4 LINE L1 -1279 6529 6424 214 268 41 62 chr18 5285004 5285101 -80703833 - MIR SINE MIR -81 181 87 305 281 85 89 chr18 5285873 5286154 -80702780 - L1M2 LINE L1 -5716 1133 854 1521 144 30 8 chr18 5286303 5286566 -80702368 - AluJo SINE Alu -33 279 11 2161 92 4 4 chr18 5286989 5287294 -80701640 + AluSx SINE Alu 1 305 0 514 171 0 11 chr18 5287733 5287821 -80701113 - Tigger7 DNA MER2_type 0 2487 2401 21 0 0 0 chr18 5287821 5287842 -80701092 + AT_rich Low_complexity Low_complexity 1 21 0 303 71 0 0 chr18 5287842 5287884 -80701050 + (CA)n Simple_repeat Simple_repeat 2 43 0 2285 76 3 3 chr18 5288528 5288818 -80700116 - AluY SINE Alu -21 290 1 366 266 143 13 chr18 5289076 5289230 -80699704 - L2 LINE L2 -2 3270 3097 995 166 6 17 chr18 5289879 5290054 -80698880 + AluJo SINE Alu 2 174 -138 232 238 32 0 chr18 5290704 5290767 -80698167 - LTR50 LTR ERVL 0 795 731 286 248 38 98 chr18 5290938 5291071 -80697863 - LTR33A LTR ERVL -340 183 59 24 0 0 0 chr18 5291335 5291359 -80697575 + AT_rich Low_complexity Low_complexity 1 24 0 2183 95 95 0 chr18 5291359 5291674 -80697260 - L1PB1 LINE L1 -1 6150 5806 1213 30 0 0 chr18 5294491 5294626 -80694308 - L1PA2 LINE L1 0 6155 6021 702 240 156 5 chr18 5295049 5295241 -80693693 - MIR SINE MIR -34 228 8 2047 118 7 27 chr18 5295774 5296071 -80692863 - AluSg SINE Alu -19 291 1 2283 147 14 14 chr18 5296220 5296588 -80692346 - MLT1B LTR MaLR -8 382 15 210 91 0 0 chr18 5297775 5297808 -80691126 + (TC)n Simple_repeat Simple_repeat 1 33 0 430 296 175 5 chr18 5298768 5298957 -80689977 + MIR SINE MIR 26 246 -16 431 261 37 45 chr18 5299005 5299139 -80689795 + MIR SINE MIR 9 141 -121 322 308 37 0 chr18 5299299 5299406 -80689528 - MIR3 SINE MIR -45 163 53 377 392 29 17 chr18 5300469 5300709 -80688225 + MIR SINE MIR 9 251 -11 207 0 0 0 chr18 5300931 5300954 -80687980 + (TTTTTG)n Simple_repeat Simple_repeat 4 26 0 332 269 172 7 chr18 5301165 5301310 -80687624 + MIR3 SINE MIR 38 206 -2 491 302 78 22 chr18 5302900 5303132 -80685802 + MIR SINE MIR 5 249 -13 1488 182 0 8 chr18 5303330 5303583 -80685351 + AluJb SINE Alu 37 287 -25 2644 212 21 13 chr18 5304871 5305399 -80683535 - MLT1F LTR MaLR -10 532 1 205 131 33 0 chr18 5305793 5305854 -80683080 + (TTTG)n Simple_repeat Simple_repeat 1 63 0 2116 119 20 16 chr18 5305857 5306160 -80682774 - AluSx SINE Alu 0 312 9 473 321 202 0 chr18 5306345 5306647 -80682287 + L2 LINE L2 2534 2896 -418 440 266 32 24 chr18 5306647 5306771 -80682163 - L2 LINE L2 0 3313 3189 397 274 198 15 chr18 5306800 5307063 -80681871 + L2 LINE L2 2927 3237 -76 526 320 17 0 chr18 5307324 5307499 -80681435 - MIR SINE MIR -74 188 11 2417 122 25 17 chr18 5307738 5308099 -80680835 + THE1B LTR MaLR 1 364 0 228 281 83 16 chr18 5309440 5309561 -80679373 + MIR SINE MIR 6 134 -128 411 345 36 26 chr18 5310231 5310430 -80678504 - MIR SINE MIR -61 201 3 210 207 0 0 chr18 5310778 5310836 -80678098 + CT-rich Low_complexity Low_complexity 1 58 0 303 375 55 0 chr18 5313739 5313867 -80675067 + MER5A DNA MER1_type 53 187 -2 427 254 76 118 chr18 5315070 5315518 -80673416 + L1ME LINE L1 5312 5740 -381 2058 131 161 13 chr18 5316121 5316494 -80672440 - MSTA LTR MaLR 0 428 1 932 267 26 0 chr18 5316541 5316773 -80672161 + MIR SINE MIR 9 246 -16 21 0 0 0 chr18 5318744 5318765 -80670169 + AT_rich Low_complexity Low_complexity 1 21 0 2195 113 0 0 chr18 5318798 5319089 -80669845 + AluSx SINE Alu 2 292 -20 310 356 43 39 chr18 5319268 5319498 -80669436 + L3 LINE CR1 1314 1544 -33 529 278 71 102 chr18 5320611 5320894 -80668040 + L1MC4a LINE L1 5307 5597 -2211 2037 148 0 3 chr18 5320894 5321199 -80667735 - AluSx SINE Alu -8 304 1 529 278 71 102 chr18 5321199 5321522 -80667412 + L1MC4a LINE L1 5597 5894 -1914 274 352 20 32 chr18 5321726 5321973 -80666961 + L2 LINE L2 1753 1996 -1318 324 284 37 22 chr18 5322077 5322211 -80666723 + L2 LINE L2 2221 2356 -958 369 333 0 0 chr18 5322776 5322878 -80666056 - MIR SINE MIR -60 148 47 228 86 0 0 chr18 5323417 5323452 -80665482 + (CAATG)n Simple_repeat Simple_repeat 4 38 0 2191 97 3 35 chr18 5323676 5323987 -80664947 - AluSx SINE Alu -9 303 3 470 294 149 35 chr18 5324182 5324410 -80664524 + MIR SINE MIR 7 260 -2 224 309 73 0 chr18 5325612 5325680 -80663254 - MIR3 SINE MIR -38 170 98 2251 167 3 21 chr18 5326791 5327163 -80661771 - MER47A DNA MER2_type -1 365 1 232 103 0 0 chr18 5328112 5328151 -80660783 + L1M3 LINE L1 5579 5617 -551 4028 153 24 54 chr18 5328825 5329007 -80659927 + L1MA9 LINE L1 5293 5479 -833 1630 181 40 0 chr18 5329007 5329284 -80659650 + AluJb SINE Alu 1 288 -24 4028 153 24 54 chr18 5329284 5330002 -80658932 + L1MA9 LINE L1 5479 6166 -146 1532 167 84 11 chr18 5330660 5330947 -80657987 + AluJo SINE Alu 1 308 -4 188 330 52 31 chr18 5331214 5331311 -80657623 - MIR3 SINE MIR -51 157 59 28 29 0 0 chr18 5331433 5331468 -80657466 + AT_rich Low_complexity Low_complexity 1 35 0 541 226 7 22 chr18 5331484 5331621 -80657313 + L2 LINE L2 3161 3295 -18 232 342 133 8 chr18 5331664 5331784 -80657150 + L2 LINE L2 3134 3268 -4 584 213 226 7 chr18 5331987 5332142 -80656792 - MER5A DNA MER1_type 0 189 1 268 325 89 32 chr18 5332985 5333108 -80655826 - MIR3 SINE MIR -46 162 33 400 286 121 19 chr18 5335149 5335314 -80653620 + MER5B DNA MER1_type 1 184 -5 752 138 56 107 chr18 5336544 5336740 -80652194 + MER2 DNA MER2_type 22 207 -138 2574 77 0 0 chr18 5338324 5338635 -80650299 - AluY SINE Alu 0 311 1 212 0 0 35 chr18 5338718 5338747 -80650187 + (TAA)n Simple_repeat Simple_repeat 2 29 0 23 0 0 0 chr18 5338985 5339008 -80649926 + AT_rich Low_complexity Low_complexity 1 23 0 224 128 0 85 chr18 5341218 5341265 -80647669 - L2 LINE L2 0 3313 3271 712 240 151 10 chr18 5341265 5341649 -80647285 + MER113 DNA MER1_type? 1 438 -83 252 254 60 0 chr18 5343150 5343217 -80645717 - L2 LINE L2 -1 3271 3201 210 22 0 87 chr18 5343695 5343741 -80645193 + (TTTTTG)n Simple_repeat Simple_repeat 1 42 0 225 0 0 0 chr18 5344787 5344812 -80644122 + (CTTTA)n Simple_repeat Simple_repeat 1 25 0 681 301 27 11 chr18 5345209 5345395 -80643539 + MIR SINE MIR 45 233 -29 911 176 0 31 chr18 5345434 5345627 -80643307 + MER46A DNA MER2_type 3 189 -47 2898 6 0 0 chr18 5345627 5345940 -80642994 + AluYb8 SINE Alu 1 313 -5 2075 159 21 19 chr18 5346564 5346936 -80641998 + THE1C LTR MaLR 3 375 0 3445 141 2 14 chr18 5348152 5348742 -80640192 - L1PB4 LINE L1 -2 6154 5572 769 247 138 14 chr18 5349685 5349981 -80638953 + L1MEc LINE L1 42 374 -6022 1381 246 16 16 chr18 5350003 5350385 -80638549 + L1MEc LINE L1 433 814 -5582 2380 80 0 7 chr18 5350399 5350698 -80638236 + AluSp SINE Alu 1 297 -16 893 248 102 29 chr18 5350705 5351221 -80637713 + L1MEc LINE L1 848 1471 -4821 2406 66 3 3 chr18 5351317 5351618 -80637316 - AluY SINE Alu -10 301 1 1973 149 0 17 chr18 5351620 5351922 -80637012 - AluJb SINE Alu -15 297 1 2238 180 59 27 chr18 5351963 5352452 -80636482 + MLT1D LTR MaLR 1 505 0 23 68 0 0 chr18 5352620 5352664 -80636270 + AT_rich Low_complexity Low_complexity 1 44 0 2272 96 0 48 chr18 5352865 5353179 -80635755 - AluSq SINE Alu -14 299 1 295 136 0 0 chr18 5353241 5353285 -80635649 - Alu SINE Alu -255 44 1 2004 121 11 0 chr18 5354355 5354666 -80634268 + AluSx SINE Alu 1 314 0 1170 205 10 23 chr18 5354670 5354973 -80633961 - MER33 DNA MER1_type -22 302 4 210 180 98 33 chr18 5355323 5355384 -80633550 - MER5A DNA MER1_type 0 189 125 781 172 33 39 chr18 5355384 5355564 -80633370 + FRAM SINE Alu 1 176 0 796 206 0 0 chr18 5355565 5355706 -80633228 - MER5A DNA MER1_type -48 141 1 226 294 0 0 chr18 5356412 5356463 -80632471 - MER115 DNA AcHobo 0 693 643 714 282 90 44 chr18 5356465 5356897 -80632037 - MER115 DNA AcHobo -241 452 1 374 302 220 41 chr18 5357183 5357697 -80631237 - HAL1 LINE L1 -789 1718 1113 180 0 0 0 chr18 5358554 5358574 -80630360 + (T)n Simple_repeat Simple_repeat 1 20 0 692 215 34 10 chr18 5358812 5359021 -80629913 + Charlie5 DNA MER1_type 2401 2614 0 1974 288 135 39 chr18 5360563 5360636 -80628298 - L2 LINE L2 -1 3312 3247 2193 106 24 0 chr18 5360636 5360929 -80628005 + AluSx SINE Alu 1 300 -12 1974 288 135 39 chr18 5360929 5362077 -80626857 - L2 LINE L2 -66 3247 1959 214 282 48 39 chr18 5362200 5362303 -80626631 - L2 LINE L2 -15 3257 3154 1000 187 11 0 chr18 5362355 5362542 -80626392 + MER5A DNA MER1_type 1 189 0 184 333 67 53 chr18 5363142 5363367 -80625567 + L2 LINE L2 1589 1816 -1498 * 233 309 48 24 chr18 5363340 5363424 -80625510 + L2 LINE L2 3182 3267 -5 825 148 0 8 chr18 5367200 5367328 -80621606 + AluJb SINE Alu 1 127 -185 198 103 0 0 chr18 5367478 5367507 -80621427 + (TC)n Simple_repeat Simple_repeat 1 29 0 1563 190 32 32 chr18 5368785 5369044 -80619890 - MER7A DNA MER2_type -2693 345 86 1723 106 0 4 chr18 5369044 5369281 -80619653 - AluSc SINE Alu -10 299 64 1563 190 32 32 chr18 5369281 5369368 -80619566 - MER7A DNA MER2_type -2951 87 1 27 18 0 70 chr18 5369747 5369782 -80619152 + AT_rich Low_complexity Low_complexity 1 32 -21 2021 138 18 31 chr18 5369782 5370172 -80618762 + L1MB2 LINE L1 5785 6169 -2 27 18 0 70 chr18 5370172 5370193 -80618741 + AT_rich Low_complexity Low_complexity 32 53 0 4478 149 47 14 chr18 5370212 5371036 -80617898 + L1MB3 LINE L1 5279 6135 -48 1897 94 94 0 chr18 5371036 5371163 -80617771 + AluSp SINE Alu 1 115 -198 282 56 0 0 chr18 5371163 5371199 -80617735 + (TAA)n Simple_repeat Simple_repeat 2 37 0 1897 94 94 0 chr18 5371199 5371337 -80617597 + AluSp SINE Alu 115 291 -22 4478 149 47 14 chr18 5371337 5371380 -80617554 + L1MB3 LINE L1 6135 6175 -8 261 151 68 14 chr18 5371394 5371467 -80617467 - L1ME4a LINE L1 -47 6074 5998 344 303 50 34 chr18 5371608 5371928 -80617006 - L1ME LINE L1 -406 5715 5391 2092 134 10 0 chr18 5372036 5372343 -80616591 - AluSx SINE Alu -2 310 1 180 0 0 0 chr18 5372406 5372426 -80616508 + (T)n Simple_repeat Simple_repeat 1 20 0 2031 178 51 39 chr18 5373951 5374119 -80614815 + L1MA7 LINE L1 5739 5903 -388 1535 181 80 15 chr18 5374119 5374444 -80614490 + MER7A DNA MER2_type 3 346 0 2031 178 51 39 chr18 5374444 5374821 -80614113 + L1MA7 LINE L1 5903 6291 0 2223 120 0 10 chr18 5374825 5375159 -80613775 + AluSx SINE Alu 1 312 0 1197 143 0 40 chr18 5375710 5375961 -80612973 - L1MA8 LINE L1 -3 6288 6048 184 239 34 68 chr18 5377526 5377614 -80611320 + MIR SINE MIR 160 244 -18 191 302 36 86 chr18 5377659 5377798 -80611136 + L2 LINE L2 3179 3310 -3 21 36 0 0 chr18 5378073 5378101 -80610833 + AT_rich Low_complexity Low_complexity 1 28 0 523 180 18 0 chr18 5379133 5379244 -80609690 + MLT1B LTR MaLR 274 386 -4 215 163 23 0 chr18 5380292 5380335 -80608599 + MIR SINE MIR 217 260 -2 745 215 0 0 chr18 5381386 5381516 -80607418 - FLAM_A SINE Alu -3 130 1 212 238 70 0 chr18 5382095 5382152 -80606782 + MIR SINE MIR 89 150 -58 243 263 21 42 chr18 5382469 5382564 -80606370 - MIR SINE MIR -24 238 146 2148 82 28 2 chr18 5382858 5383245 -80605689 - Charlie3 DNA MER1_type -4 2706 2243 * 3124 100 38 0 chr18 5383242 5383694 -80605240 - Charlie3 DNA MER1_type -2212 498 30 238 132 0 0 chr18 5383725 5383763 -80605171 - Charlie3 DNA MER1_type -2671 39 2 212 283 248 26 chr18 5384200 5384511 -80604423 + L3 LINE CR1 1162 1541 -36 7619 19 1 1 chr18 5384616 5385638 -80603296 + L1PA4 LINE L1 5152 6174 0 1066 195 133 21 chr18 5385639 5385956 -80602978 + Charlie1 DNA MER1_type 2264 2633 -128 855 146 0 7 chr18 5385956 5386100 -80602834 - L1PA15 LINE L1 -2 6163 6021 1066 195 133 21 chr18 5386100 5386167 -80602767 + Charlie1 DNA MER1_type 2633 2691 -70 1859 157 4 0 chr18 5387368 5387670 -80601264 + AluJb SINE Alu 1 303 0 389 267 59 21 chr18 5389284 5389471 -80599463 + LTR33 LTR ERVL 324 517 -4 24 53 0 0 chr18 5390783 5390821 -80598113 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr18 5391046 5391069 -80597865 + AT_rich Low_complexity Low_complexity 1 23 0 361 110 0 121 chr18 5391255 5391346 -80597588 + Charlie5 DNA MER1_type 48 127 -2485 1075 172 41 10 chr18 5391346 5391637 -80597297 + Charlie5 DNA MER1_type 2233 2532 -80 36 62 0 0 chr18 5392003 5392067 -80596867 + AT_rich Low_complexity Low_complexity 1 64 0 435 184 0 0 chr18 5392448 5392535 -80596399 - L1MC5 LINE L1 -525 7436 7350 367 55 18 0 chr18 5392535 5392590 -80596344 - L1MC5 LINE L1 -569 7392 7337 969 134 27 113 chr18 5392598 5392927 -80596007 - MER33 DNA MER1_type 0 324 24 1397 205 38 48 chr18 5392938 5393358 -80595576 - L1MC5 LINE L1 -621 7340 6925 633 211 54 12 chr18 5393418 5393641 -80595293 - L1MC5 LINE L1 -1009 6805 6554 413 295 132 64 chr18 5393700 5394245 -80594689 - L1MC4a LINE L1 -1341 6467 5886 23 68 0 0 chr18 5394326 5394370 -80594564 + AT_rich Low_complexity Low_complexity 1 44 0 242 224 16 144 chr18 5394506 5394631 -80594303 + MER5C DNA MER1_type 16 124 -200 217 111 56 0 chr18 5394695 5394731 -80594203 + MER5C DNA MER1_type 286 323 -1 1860 169 0 10 chr18 5394779 5395087 -80593847 - AluJo SINE Alu -7 305 1 563 299 61 38 chr18 5395563 5396008 -80592926 - HAL1b LINE L1 -745 603 149 21 36 0 0 chr18 5396059 5396087 -80592847 + AT_rich Low_complexity Low_complexity 1 28 0 1961 144 43 70 chr18 5397293 5397738 -80591196 + Tigger2a DNA MER2_type 1 433 -1 351 65 0 0 chr18 5399880 5399926 -80589008 + (TG)n Simple_repeat Simple_repeat 2 47 0 192 297 93 25 chr18 5400327 5400445 -80588489 + L2 LINE L2 2316 2441 -873 267 281 123 26 chr18 5400481 5400595 -80588339 - L2 LINE L2 -2 3270 3146 1747 182 0 7 chr18 5401621 5401918 -80587016 - AluJb SINE Alu -15 297 3 822 286 73 22 chr18 5402292 5402648 -80586286 + LTR16B LTR ERVL 1 374 -90 431 264 121 41 chr18 5403042 5403181 -80585753 + MLT1I LTR MaLR 1 128 -281 1929 116 6 42 chr18 5403181 5403516 -80585418 + L1PA15 LINE L1 5843 6165 0 431 264 121 41 chr18 5403516 5403691 -80585243 + MLT1I LTR MaLR 128 340 -69 1322 114 88 65 chr18 5404980 5405243 -80583691 - MSTA LTR MaLR 0 428 160 241 156 0 125 chr18 5405234 5405267 -80583667 - MSTA LTR MaLR -372 56 20 * 2583 122 0 5 chr18 5405267 5405644 -80583290 + THE1C LTR MaLR 1 375 0 9886 124 46 5 chr18 5405644 5407161 -80581773 + THE1C-int LTR MaLR 1 1580 0 2671 101 8 8 chr18 5407161 5407536 -80581398 + THE1C LTR MaLR 1 375 0 241 156 0 125 chr18 5407536 5407564 -80581370 - MSTA LTR MaLR -405 23 1 255 278 53 90 chr18 5408277 5408410 -80580524 + MIR SINE MIR 79 206 -56 313 363 133 0 chr18 5408671 5408806 -80580128 + L2 LINE L2 3102 3254 -18 582 223 0 0 chr18 5408831 5408988 -80579946 + (TGGA)n Simple_repeat Simple_repeat 4 160 0 2074 143 0 0 chr18 5409543 5409844 -80579090 - AluSx SINE Alu -11 301 1 1577 199 10 10 chr18 5410691 5410987 -80577947 + AluJo SINE Alu 1 296 -16 682 224 99 0 chr18 5412849 5413001 -80575933 + FRAM SINE Alu 1 166 -10 192 40 0 0 chr18 5413162 5413187 -80575747 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 936 206 0 30 chr18 5413191 5413390 -80575544 - AluJb SINE Alu -34 278 86 453 76 15 0 chr18 5413893 5413959 -80574975 - MSTA LTR MaLR -332 96 30 298 0 23 23 chr18 5413997 5414040 -80574894 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2191 105 0 0 chr18 5414042 5414328 -80574606 - AluSg SINE Alu -24 286 1 198 0 0 0 chr18 5415221 5415243 -80573691 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1878 124 0 8 chr18 5416006 5416316 -80572618 - AluSx SINE Alu 0 325 18 218 293 0 0 chr18 5416981 5417022 -80571912 - L3b LINE CR1 -268 1315 1275 323 67 0 0 chr18 5417625 5417670 -80571264 - MADE1 DNA Mariner -5 75 31 824 231 105 8 chr18 5418448 5418686 -80570248 - MIR SINE MIR -1 261 1 563 235 7 13 chr18 5419810 5419963 -80568971 + MLT1D LTR MaLR 354 505 0 2118 137 0 0 chr18 5420818 5421111 -80567823 - AluSx SINE Alu -19 293 1 1142 198 56 5 chr18 5421468 5421773 -80567161 - MER39 LTR ERV1 -331 376 1 470 275 30 15 chr18 5422100 5422231 -80566703 + MIR3 SINE MIR 15 147 -61 274 146 0 0 chr18 5422858 5422899 -80566035 + MER5A DNA MER1_type 149 189 0 234 0 0 0 chr18 5423031 5423057 -80565877 + (ATG)n Simple_repeat Simple_repeat 3 28 0 369 0 0 0 chr18 5423057 5423098 -80565836 + (TG)n Simple_repeat Simple_repeat 2 42 0 768 122 0 0 chr18 5423573 5423680 -80565254 + U6 snRNA snRNA 1 107 0 5070 142 56 13 chr18 5423681 5424749 -80564185 + L1PB4 LINE L1 4639 5797 -359 2250 94 0 7 chr18 5424749 5425084 -80563850 - AluSq SINE Alu 0 333 1 5070 142 56 13 chr18 5425084 5425452 -80563482 + L1PB4 LINE L1 5797 6148 -8 237 135 0 0 chr18 5425454 5425506 -80563428 + (TA)n Simple_repeat Simple_repeat 1 52 0 218 309 129 35 chr18 5425838 5426039 -80562895 - L2 LINE L2 -217 3055 2836 459 0 0 0 chr18 5426211 5426262 -80562672 + (TG)n Simple_repeat Simple_repeat 2 52 0 373 288 176 39 chr18 5426283 5426334 -80562600 + MIR SINE MIR 2 45 -217 1285 185 117 15 chr18 5426334 5426599 -80562335 + AluJo SINE Alu 1 292 -10 373 288 176 39 chr18 5426599 5426752 -80562182 + MIR SINE MIR 45 234 -28 221 246 35 0 chr18 5427318 5427375 -80561559 + L2 LINE L2 3250 3308 -5 873 219 0 0 chr18 5427488 5427643 -80561291 + FRAM SINE Alu 5 159 -17 213 121 0 0 chr18 5428942 5428975 -80559959 + (TA)n Simple_repeat Simple_repeat 2 34 0 2619 55 0 0 chr18 5430240 5430548 -80558386 - AluY SINE Alu -3 308 1 208 328 37 22 chr18 5431069 5431203 -80557731 + L2 LINE L2 2704 2839 -475 1023 260 110 9 chr18 5431398 5431725 -80557209 - MLT1J LTR MaLR -60 451 92 2092 120 13 43 chr18 5431818 5432192 -80556742 + L1MA2 LINE L1 5942 6304 0 209 306 116 74 chr18 5434846 5434967 -80553967 - L2 LINE L2 0 3272 3147 2212 106 0 0 chr18 5435192 5435509 -80553425 - AluSx SINE Alu 0 318 2 1830 148 31 0 chr18 5435928 5436219 -80552715 - AluJo SINE Alu -12 300 1 180 0 0 0 chr18 5436541 5436561 -80552373 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 2461 43 0 0 chr18 5436568 5436848 -80552086 - AluY SINE Alu -31 280 1 213 276 40 26 chr18 5437790 5437866 -80551068 + MIR3 SINE MIR 115 191 -17 814 147 0 33 chr18 5438803 5438953 -80549981 - FRAM SINE Alu 0 176 32 2577 27 0 0 chr18 5438953 5439245 -80549689 + L1PA6 LINE L1 5606 5897 -257 585 260 117 63 chr18 5439807 5439838 -80549096 + L1MB8 LINE L1 5359 5387 -791 2549 72 0 0 chr18 5439838 5440142 -80548792 + AluSq SINE Alu 1 304 -9 2222 98 3 3 chr18 5440143 5440439 -80548495 + AluSc SINE Alu 1 296 -13 585 260 117 63 chr18 5440439 5440868 -80548066 + L1MB8 LINE L1 5386 5866 -312 181 140 0 40 chr18 5440985 5441035 -80547899 + (TAAAAA)n Simple_repeat Simple_repeat 6 53 0 192 282 188 43 chr18 5441229 5441346 -80547588 - L2 LINE L2 -2 3270 3137 239 218 36 0 chr18 5441850 5441905 -80547029 + MER103 DNA DNA 62 118 -48 2388 167 26 45 chr18 5443060 5443234 -80545700 - LTR32 LTR ERVL 0 471 295 2083 130 0 7 chr18 5443234 5443541 -80545393 - AluJb SINE Alu -7 305 1 2388 167 26 45 chr18 5443541 5443832 -80545102 - LTR32 LTR ERVL -176 295 15 875 259 58 66 chr18 5443834 5443933 -80545001 - L2 LINE L2 -4 3309 3211 1759 123 0 4 chr18 5443933 5444176 -80544758 + AluSg SINE Alu 45 286 -24 875 259 58 66 chr18 5444176 5444454 -80544480 - L2 LINE L2 -102 3211 2935 224 327 19 28 chr18 5444484 5444591 -80544343 + MIR SINE MIR 19 124 -84 3506 140 60 0 chr18 5444695 5445274 -80543660 + L1MA8 LINE L1 5506 6119 -172 443 191 76 9 chr18 5445563 5445668 -80543266 - L1MA6 LINE L1 0 6300 6189 196 305 85 43 chr18 5446547 5446646 -80542288 - MIR SINE MIR -6 256 148 2298 116 7 0 chr18 5446646 5446956 -80541978 - AluSx SINE Alu 0 312 1 196 305 85 43 chr18 5446956 5446997 -80541937 - MIR SINE MIR -114 148 110 313 320 120 20 chr18 5448586 5448689 -80540245 + MIR SINE MIR 28 152 -110 1140 154 95 27 chr18 5448689 5448910 -80540024 - MER46A DNA MER2_type 0 236 1 313 320 120 20 chr18 5448910 5448956 -80539978 + MIR SINE MIR 152 192 -70 262 338 12 0 chr18 5449057 5449137 -80539797 + L2 LINE L2 3220 3300 -13 634 234 88 21 chr18 5449495 5449687 -80539247 + MLT1I LTR MaLR 2 206 -203 25 31 0 0 chr18 5450300 5450332 -80538602 + AT_rich Low_complexity Low_complexity 1 32 0 693 329 17 17 chr18 5450905 5451252 -80537682 + L1ME LINE L1 5296 5642 -520 547 329 38 17 chr18 5451250 5451539 -80537395 + L1ME LINE L1 5413 5707 -455 * 212 0 36 0 chr18 5451743 5451771 -80537163 + (TG)n Simple_repeat Simple_repeat 2 30 0 1993 172 50 69 chr18 5452294 5452337 -80536597 - MSTA LTR MaLR 0 428 386 2238 122 0 3 chr18 5452337 5452649 -80536285 + AluSx SINE Alu 1 311 -1 1993 172 50 69 chr18 5452649 5452966 -80535968 - MSTA LTR MaLR -42 386 75 3296 166 40 83 chr18 5452966 5453688 -80535246 - LTR8 LTR ERV1 0 691 1 1993 172 50 69 chr18 5453688 5453762 -80535172 - MSTA LTR MaLR -353 75 1 255 228 35 0 chr18 5453789 5453846 -80535088 + L2 LINE L2 3214 3272 0 2458 114 121 14 chr18 5453898 5454328 -80534606 + MER4B LTR ERV1 3 478 -132 219 69 0 0 chr18 5454391 5454420 -80534514 + (TG)n Simple_repeat Simple_repeat 1 29 0 202 239 22 0 chr18 5455598 5455644 -80533290 - L2 LINE L2 0 3313 3267 792 249 24 20 chr18 5455715 5455964 -80532970 + LTR16A LTR ERVL 21 270 -180 365 234 72 18 chr18 5456872 5456983 -80531951 - L2 LINE L2 -4 3309 3193 508 294 80 22 chr18 5457257 5457488 -80531446 - MIR SINE MIR -6 256 16 21 0 0 0 chr18 5457967 5457988 -80530946 + AT_rich Low_complexity Low_complexity 1 21 0 380 281 33 0 chr18 5458856 5458977 -80529957 - MER117 DNA MER1_type -68 129 5 1769 145 14 0 chr18 5459535 5459824 -80529110 - L1MA4 LINE L1 -2 6298 6006 2039 67 4 8 chr18 5459896 5460151 -80528783 + AluSc SINE Alu 44 297 -12 732 237 18 80 chr18 5460802 5461026 -80527908 + MIR SINE MIR 29 238 -24 1707 121 73 35 chr18 5461232 5461521 -80527413 + AluJo SINE Alu 1 300 -12 319 237 157 3 chr18 5461619 5461780 -80527154 + MLT1J2 LTR MaLR 9 188 -258 1780 146 0 56 chr18 5462400 5462702 -80526232 - AluJb SINE Alu -27 285 1 296 350 55 79 chr18 5462785 5463037 -80525897 + L2 LINE L2 2932 3175 -97 2347 111 0 0 chr18 5463037 5463343 -80525591 - AluSx SINE Alu -6 306 1 296 350 55 79 chr18 5463343 5463433 -80525501 + L2 LINE L2 3175 3266 -6 676 169 15 39 chr18 5463657 5463787 -80525147 - AluJb SINE Alu -1 311 185 2244 63 11 11 chr18 5514011 5514326 -80474608 + AluY SINE Alu 1 315 0 21 0 0 0 chr18 5514878 5514899 -80474035 + AT_rich Low_complexity Low_complexity 1 21 0 340 211 158 46 chr18 5515405 5515557 -80473377 + MER104 DNA Tc2 6 174 -6 231 210 48 16 chr18 5516033 5516095 -80472839 - L1ME4a LINE L1 -91 6030 5967 22 35 0 0 chr18 5516437 5516466 -80472468 + AT_rich Low_complexity Low_complexity 1 29 0 44 46 0 0 chr18 5516643 5516708 -80472226 + AT_rich Low_complexity Low_complexity 1 65 0 306 348 8 8 chr18 5516708 5516826 -80472108 - L1M4 LINE L1 -1999 4147 4030 2575 196 52 3 chr18 5517104 5517677 -80471257 - L1P5 LINE L1 -876 5270 4670 2991 134 6 12 chr18 5517680 5518187 -80470747 + L1P5 LINE L1 5279 5782 -372 898 217 94 0 chr18 5518366 5518569 -80470365 + MER34 LTR ERV1 321 542 0 187 188 94 78 chr18 5519387 5519451 -80469483 - L2 LINE L2 -15 3257 3193 207 320 191 0 chr18 5519560 5519707 -80469227 - L2 LINE L2 -155 3117 2943 208 28 83 0 chr18 5519893 5519929 -80469005 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1898 169 21 6 chr18 5522372 5522709 -80466225 - MER2 DNA MER2_type -2 342 1 370 241 9 206 chr18 5524761 5525106 -80463828 - L2 LINE L2 0 3272 2996 895 254 33 0 chr18 5525672 5525885 -80463049 - MER58A DNA MER1_type -4 220 1 258 352 0 0 chr18 5526139 5526227 -80462707 + L3 LINE CR1 1488 1575 -2 708 229 24 18 chr18 5526663 5526829 -80462105 + MIR SINE MIR 22 188 -74 289 220 51 4 chr18 5527253 5527339 -80461595 + MIR3 SINE MIR 94 156 -52 193 298 77 10 chr18 5527423 5527527 -80461407 - L2 LINE L2 -268 3045 2935 326 284 333 0 chr18 5527829 5528012 -80460922 + MIR SINE MIR 5 248 -14 249 269 20 74 chr18 5529450 5529599 -80459335 - L2 LINE L2 -842 2472 2332 14221 162 20 26 chr18 5529816 5530151 -80458783 - L1MA3 LINE L1 -237 7487 7152 1903 50 8 0 chr18 5530151 5530392 -80458542 - L1PA5 LINE L1 -4 6150 5908 14221 162 20 26 chr18 5530392 5531184 -80457750 - L1MA3 LINE L1 -572 7152 6357 3355 23 0 0 chr18 5531184 5531574 -80457360 - L1PA4 LINE L1 -6 6149 5760 14221 162 20 26 chr18 5531574 5535518 -80453416 - L1MA3 LINE L1 -1367 6357 2445 1480 229 61 13 chr18 5535518 5535894 -80453040 - Charlie1 DNA MER1_type -2364 397 4 3056 87 0 2 chr18 5535931 5536368 -80452566 - L1M1 LINE L1 -5110 2455 2020 11983 160 22 13 chr18 5536988 5538974 -80449960 - L1M1 LINE L1 -5548 2017 14 493 280 7 21 chr18 5540526 5540669 -80448265 - MIR SINE MIR -102 160 20 366 288 102 8 chr18 5540785 5540903 -80448031 - MIR3 SINE MIR -27 181 53 449 62 15 0 chr18 5541840 5541905 -80447029 + (TCCA)n Simple_repeat Simple_repeat 1 66 0 452 159 45 23 chr18 5542152 5542240 -80446694 + MER5A DNA MER1_type 2 91 -98 1360 76 0 62 chr18 5542241 5542451 -80446483 + MER107 DNA MER1_type 1 197 0 2004 143 19 16 chr18 5543792 5544106 -80444828 + MER1B DNA MER1_type 1 315 -24 324 332 127 19 chr18 5544158 5544480 -80444454 + LTR16C LTR ERVL 135 491 0 1119 123 0 0 chr18 5544640 5544803 -80444131 - AluSg/x SINE Alu -2 310 148 1533 84 0 0 chr18 5544803 5544993 -80443941 - AluSq SINE Alu -123 190 1 1200 35 0 0 chr18 5546096 5546238 -80442696 + L1PA8 LINE L1 6020 6161 -11 273 364 0 39 chr18 5546642 5546771 -80442163 - MIR SINE MIR -64 144 21 319 353 17 35 chr18 5547437 5547610 -80441324 - MER5A DNA MER1_type -1 188 19 350 317 98 0 chr18 5547620 5547743 -80441191 - MIR3 SINE MIR -53 155 21 1569 121 12 40 chr18 5548340 5548588 -80440346 - AluJo SINE Alu -30 282 42 30 27 0 0 chr18 5548591 5548628 -80440306 + AT_rich Low_complexity Low_complexity 1 37 0 241 192 39 64 chr18 5548628 5548706 -80440228 + MLT1K LTR MaLR 513 588 0 297 306 32 0 chr18 5548879 5549007 -80439927 + MIR SINE MIR 6 142 -66 186 103 0 0 chr18 5549054 5549083 -80439851 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 747 313 111 21 chr18 5549090 5549515 -80439419 - L2 LINE L2 -7 3306 2844 1089 295 90 22 chr18 5550035 5550536 -80438398 - L2 LINE L2 -534 2780 2246 236 322 89 0 chr18 5550592 5550682 -80438252 + MIR SINE MIR 159 256 -6 201 351 60 33 chr18 5551298 5551449 -80437485 - MIR3 SINE MIR -40 168 14 3206 238 75 10 chr18 5551779 5552718 -80436216 + MER45B DNA AcHobo 4 1033 -7 191 59 0 59 chr18 5552960 5552994 -80435940 + (TTTAA)n Simple_repeat Simple_repeat 3 34 0 557 130 11 0 chr18 5553128 5553220 -80435714 + L1MA10 LINE L1 6242 6334 0 226 288 62 0 chr18 5553409 5553489 -80435445 + L2 LINE L2 2623 2707 -607 309 320 62 16 chr18 5553796 5553924 -80435010 + L2 LINE L2 3173 3306 -7 440 222 4 176 chr18 5554703 5554964 -80433970 - MIR SINE MIR -13 249 34 366 278 35 43 chr18 5555117 5555232 -80433702 - MIR SINE MIR -101 161 48 581 204 18 0 chr18 5555334 5555447 -80433487 - L1PA8A LINE L1 -1 6130 6016 2592 85 3 22 chr18 5555449 5555814 -80433120 - L1PA10 LINE L1 -117 6051 5694 334 359 50 22 chr18 5556047 5556228 -80432706 - MIR3 SINE MIR 0 208 23 543 203 51 8 chr18 5556289 5556407 -80432527 - L2 LINE L2 0 3313 3191 3274 227 67 36 chr18 5558152 5558658 -80430276 + L1MDb LINE L1 589 1078 -5328 2161 104 3 10 chr18 5558658 5558993 -80429941 + AluSx SINE Alu 1 312 0 3274 227 67 36 chr18 5558993 5560076 -80428858 + L1MDb LINE L1 1078 2267 -4139 * 3649 158 92 64 chr18 5560070 5560134 -80428800 + L1MB4 LINE L1 5218 5279 -901 1688 206 0 7 chr18 5560134 5560435 -80428499 + AluJo SINE Alu 1 299 -13 3649 158 92 64 chr18 5560435 5560702 -80428232 + L1MB4 LINE L1 5279 5537 -643 333 161 0 0 chr18 5560702 5560758 -80428176 + AluSg/x SINE Alu 165 220 -80 3649 158 92 64 chr18 5560758 5561314 -80427620 + L1MB4 LINE L1 5537 6177 -3 1283 228 75 47 chr18 5561317 5561991 -80426943 + L1MDb LINE L1 2254 2945 -3461 * 2174 265 27 13 chr18 5561988 5562702 -80426232 + L1M4 LINE L1 4273 4996 -1150 3139 167 23 49 chr18 5562709 5563013 -80425921 - L1MB4 LINE L1 -76 6104 5794 687 217 0 8 chr18 5563013 5563142 -80425792 - FLAM_A SINE Alu -5 128 1 3139 167 23 49 chr18 5563142 5563526 -80425408 - L1MB4 LINE L1 -386 5794 5434 326 172 0 49 chr18 5563531 5563613 -80425321 - L1MB4 LINE L1 -699 5467 5397 253 251 184 49 chr18 5564103 5564266 -80424668 + MIR SINE MIR 16 200 -62 797 271 57 27 chr18 5564373 5564672 -80424262 - L2 LINE L2 -716 2598 2291 263 322 133 7 chr18 5564803 5564946 -80423988 - L2 LINE L2 -797 2517 2357 189 0 0 0 chr18 5564966 5564987 -80423947 + (CTAAT)n Simple_repeat Simple_repeat 2 22 0 2082 83 0 95 chr18 5565515 5565851 -80423083 + AluSc SINE Alu 2 305 -4 2361 100 0 0 chr18 5568578 5568888 -80420046 - AluSg SINE Alu 0 310 1 210 71 0 0 chr18 5568888 5568916 -80420018 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 6309 106 18 10 chr18 5568922 5570439 -80418495 - L1PA8A LINE L1 -28 6103 4389 1342 267 59 91 chr18 5570957 5571587 -80417347 + MLT2E LTR ERVL 19 628 0 324 0 0 0 chr18 5571607 5571643 -80417291 + (CA)n Simple_repeat Simple_repeat 2 37 0 3317 118 4 2 chr18 5571704 5572205 -80416729 - L1PA15 LINE L1 -1 6164 5663 495 0 0 0 chr18 5572448 5572503 -80416431 + (CA)n Simple_repeat Simple_repeat 2 56 0 519 208 28 9 chr18 5572503 5572609 -80416325 - FLAM_A SINE Alu -24 118 11 184 299 0 69 chr18 5572740 5572827 -80416107 + L2 LINE L2 3189 3269 -3 426 189 326 8 chr18 5573726 5573858 -80415076 - MIR SINE MIR -13 249 76 249 256 21 27 chr18 5574074 5574187 -80414747 + MIR SINE MIR 70 182 -62 253 217 0 0 chr18 5574550 5574596 -80414338 - MER81 DNA DNA -1 113 68 400 209 29 43 chr18 5574834 5574973 -80413961 - L1MC4 LINE L1 -4 8038 7902 298 319 88 9 chr18 5576324 5576408 -80412526 - MER63 DNA MER1_type -311 751 675 3022 155 12 40 chr18 5576408 5576989 -80411945 + MER34B LTR ERV1 1 565 0 298 319 88 9 chr18 5576989 5577017 -80411917 - MER63 DNA MER1_type -387 675 4 188 386 79 0 chr18 5579238 5579352 -80409582 + L2 LINE L2 3114 3236 -36 316 182 30 30 chr18 5579406 5579505 -80409429 + LTR49-int LTR ERV1 3787 3885 -2446 6657 151 30 17 chr18 5579510 5581607 -80407327 - L1PA13 LINE L1 0 6163 4041 24 0 0 0 chr18 5581935 5581959 -80406975 + AT_rich Low_complexity Low_complexity 1 24 0 2128 134 3 3 chr18 5581962 5582269 -80406665 + AluSx SINE Alu 1 307 -5 3659 82 12 6 chr18 5582554 5583056 -80405878 - L1PA8 LINE L1 -7 6165 5661 21 0 0 0 chr18 5583214 5583235 -80405699 + AT_rich Low_complexity Low_complexity 1 21 0 1446 235 47 2 chr18 5583693 5584118 -80404816 + L1MC2 LINE L1 4458 4901 -1245 3910 182 59 14 chr18 5584159 5584955 -80403979 + L1MC2 LINE L1 5512 6343 -1 424 339 44 0 chr18 5585707 5585887 -80403047 + L2 LINE L2 2565 2752 -562 261 329 139 35 chr18 5585902 5586218 -80402716 + L2 LINE L2 2964 3312 -1 232 255 294 20 chr18 5586904 5587057 -80401877 - L2 LINE L2 -312 3001 2807 1398 148 22 82 chr18 5588235 5588552 -80400382 - L1PA16 LINE L1 -9 6157 5860 1246 167 33 18 chr18 5589036 5589312 -80399622 - L1MA7 LINE L1 -3 6288 6009 2302 104 0 3 chr18 5589791 5590099 -80398835 - AluSp SINE Alu -6 307 1 218 351 33 82 chr18 5590327 5590572 -80398362 - L2 LINE L2 -1 3271 3039 233 211 0 0 chr18 5591106 5591137 -80397797 + A-rich Low_complexity Low_complexity 1 34 -18 2268 104 3 16 chr18 5591137 5591454 -80397480 + AluSq SINE Alu 1 313 0 233 211 0 0 chr18 5591454 5591474 -80397460 + A-rich Low_complexity Low_complexity 33 52 0 1242 144 85 4 chr18 5591999 5592235 -80396699 + L1PB3 LINE L1 5898 6152 -2 1810 94 8 4 chr18 5592435 5592680 -80396254 - AluSq SINE Alu -67 246 1 2081 87 42 3 chr18 5593057 5593346 -80395588 + AluSq SINE Alu 1 300 -13 391 293 30 107 chr18 5593732 5593995 -80394939 - L2 LINE L2 -15 3257 3015 251 222 0 0 chr18 5595501 5595546 -80393388 - MER3 DNA MER1_type 0 209 165 823 247 0 0 chr18 5595548 5595718 -80393216 - FRAM SINE Alu -6 170 1 664 188 58 13 chr18 5595719 5595873 -80393061 - MER3 DNA MER1_type -48 161 1 298 327 105 16 chr18 5596934 5597165 -80391769 - L2 LINE L2 -1577 1737 1481 2366 111 27 16 chr18 5597165 5597536 -80391398 - THE1C LTR MaLR 0 375 1 298 327 105 16 chr18 5597536 5597552 -80391382 - L2 LINE L2 -1833 1481 1468 365 204 0 11 chr18 5598770 5598863 -80390071 + GA-rich Low_complexity Low_complexity 2 93 0 300 296 0 0 chr18 5599820 5599891 -80389043 - L2 LINE L2 -39 3233 3163 256 358 47 55 chr18 5600106 5600363 -80388571 + L2 LINE L2 3018 3272 0 204 294 153 12 chr18 5600802 5600887 -80388047 - MER5A DNA MER1_type -57 132 36 400 194 167 19 chr18 5600902 5601010 -80387924 - MIR3 SINE MIR -46 162 39 366 343 88 5 chr18 5601304 5601520 -80387414 + L3b LINE CR1 1226 1459 -124 1505 116 158 23 chr18 5602449 5602708 -80386226 + AluSx SINE Alu 5 298 -14 217 245 19 0 chr18 5602708 5602761 -80386173 + MIR SINE MIR 144 197 -65 282 340 158 34 chr18 5603263 5603960 -80384974 - L2 LINE L2 -528 2786 2004 303 294 37 55 chr18 5604460 5604623 -80384311 - L2 LINE L2 -4 3268 3109 26 50 0 0 chr18 5605262 5605302 -80383632 + AT_rich Low_complexity Low_complexity 1 40 0 2653 80 16 13 chr18 5606071 5606445 -80382489 - THE1C LTR MaLR 0 375 1 4322 203 49 42 chr18 5606775 5608369 -80380565 - L1MC2 LINE L1 -8 6336 4742 5365 150 37 23 chr18 5608385 5608877 -80380057 - L1MA7 LINE L1 -6 6285 5801 291 54 0 0 chr18 5608877 5608914 -80380020 + (CA)n Simple_repeat Simple_repeat 2 38 0 5365 150 37 23 chr18 5608914 5610306 -80378628 - L1MA7 LINE L1 -490 5801 4369 567 361 86 30 chr18 5610349 5610890 -80378044 + L2 LINE L2 1003 1599 -1715 1765 190 54 3 chr18 5610890 5611221 -80377713 + MER7A DNA MER2_type 1 346 0 567 361 86 30 chr18 5611221 5611433 -80377501 + L2 LINE L2 1599 1798 -1516 23 0 0 0 chr18 5611442 5611465 -80377469 + AT_rich Low_complexity Low_complexity 1 23 0 619 369 12 12 chr18 5611479 5611810 -80377124 + MLT1I LTR MaLR 79 409 0 739 333 53 48 chr18 5611835 5612358 -80376576 + L2 LINE L2 1859 2384 -930 464 296 47 33 chr18 5612578 5612879 -80376055 + L1MDa LINE L1 1791 2095 -4445 508 252 0 25 chr18 5613032 5613151 -80375783 + FLAM_A SINE Alu 1 116 -17 189 0 0 0 chr18 5613156 5613177 -80375757 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 26 30 0 0 chr18 5613268 5613301 -80375633 + AT_rich Low_complexity Low_complexity 1 33 0 16736 156 29 23 chr18 5614066 5620983 -80367951 + L1MA3 LINE L1 766 7724 0 478 298 89 62 chr18 5621358 5621650 -80367284 + LTR33 LTR ERVL 15 314 -207 653 275 98 4 chr18 5622800 5623044 -80365890 - MLT1F LTR MaLR -271 271 5 2262 223 32 16 chr18 5623090 5623655 -80365279 - L1MD3 LINE L1 -9 7986 7413 618 222 15 1 chr18 5623655 5623787 -80365147 - MLT1F1 LTR MaLR -442 125 1 205 204 0 23 chr18 5624999 5625043 -80363891 + CT-rich Low_complexity Low_complexity 3 45 0 2464 90 0 0 chr18 5625781 5626093 -80362841 - AluSx SINE Alu 0 312 1 828 254 30 13 chr18 5626119 5626355 -80362579 + MIR SINE MIR 23 262 0 251 263 61 18 chr18 5627608 5627722 -80361212 + LTR67 LTR ERVL 410 528 -29 895 181 0 0 chr18 5628065 5628209 -80360725 - MER46A DNA MER2_type -92 144 1 211 250 190 26 chr18 5628218 5628334 -80360600 + MIR SINE MIR 91 225 -37 266 347 21 79 chr18 5628867 5629057 -80359877 + MER5A DNA MER1_type 8 186 -3 227 319 14 0 chr18 5629110 5629182 -80359752 + MER91 DNA MER1_type 3 75 -65 21 0 0 0 chr18 5630273 5630294 -80358640 + AT_rich Low_complexity Low_complexity 1 21 0 275 273 0 0 chr18 5631235 5631301 -80357633 + MER5A DNA MER1_type 101 166 -23 680 220 15 0 chr18 5631308 5631440 -80357494 - MER5A DNA MER1_type -45 144 11 518 125 10 0 chr18 5631952 5632048 -80356886 - L1MA8 LINE L1 -1 6290 6194 263 281 122 22 chr18 5633225 5633364 -80355570 + MIR SINE MIR 90 242 -20 202 326 42 32 chr18 5634725 5634820 -80354114 + MIR SINE MIR 87 182 -80 376 184 13 0 chr18 5635068 5635144 -80353790 - MER116 DNA Mariner -2 78 2 267 173 0 0 chr18 5637147 5637199 -80351735 + GA-rich Low_complexity Low_complexity 3 54 0 899 263 16 20 chr18 5637262 5637509 -80351425 - MIR SINE MIR -15 247 2 2208 99 0 3 chr18 5637562 5637854 -80351080 + AluSx SINE Alu 1 291 -21 281 137 123 14 chr18 5638678 5638751 -80350183 + L2 LINE L2 2261 2341 -973 802 286 89 23 chr18 5638758 5639381 -80349553 + L2 LINE L2 2644 3313 0 180 0 0 0 chr18 5639516 5639536 -80349398 + (A)n Simple_repeat Simple_repeat 1 20 0 1724 178 0 3 chr18 5639653 5639946 -80348988 - AluJo SINE Alu -10 302 11 212 158 0 0 chr18 5641229 5641267 -80347667 + GA-rich Low_complexity Low_complexity 1 38 0 299 272 19 19 chr18 5641351 5641454 -80347480 - MIR3 SINE MIR -10 198 96 22 0 0 0 chr18 5643469 5643491 -80345443 + AT_rich Low_complexity Low_complexity 1 22 0 1964 151 3 0 chr18 5643492 5643776 -80345158 - AluSx SINE Alu -26 286 2 180 308 51 51 chr18 5644373 5644490 -80344444 - MIR3 SINE MIR -24 184 68 201 182 0 0 chr18 5645536 5645591 -80343343 + (TA)n Simple_repeat Simple_repeat 2 56 0 1046 190 0 69 chr18 5646250 5646466 -80342468 + AluJo SINE Alu 81 281 -31 23 33 0 0 chr18 5646466 5646496 -80342438 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr18 5646716 5646751 -80342183 + AT_rich Low_complexity Low_complexity 1 35 0 2346 113 0 0 chr18 5647682 5647992 -80340942 - AluSx SINE Alu -2 310 1 360 0 0 0 chr18 5648041 5648081 -80340853 + (TG)n Simple_repeat Simple_repeat 1 40 0 1464 142 67 28 chr18 5648160 5648413 -80340521 - AluJo SINE Alu -49 263 1 26 0 0 0 chr18 5648673 5648699 -80340235 + AT_rich Low_complexity Low_complexity 1 26 0 23 68 0 0 chr18 5649795 5649839 -80339095 + AT_rich Low_complexity Low_complexity 1 44 0 595 289 94 43 chr18 5650293 5650549 -80338385 - MER93a LTR ERV1 -71 331 63 426 348 108 37 chr18 5650778 5651315 -80337619 + L3 LINE CR1 676 1250 -327 272 341 136 17 chr18 5651972 5652148 -80336786 + L3 LINE CR1 1372 1568 -9 715 276 37 12 chr18 5652735 5652981 -80335953 + MIR SINE MIR 2 253 -9 2152 111 0 3 chr18 5652986 5653301 -80335633 - AluSc SINE Alu 0 314 1 32 26 0 0 chr18 5653507 5653546 -80335388 + AT_rich Low_complexity Low_complexity 1 39 0 451 98 12 12 chr18 5655173 5655234 -80333700 + (TTCC)n Simple_repeat Simple_repeat 3 66 -18 2166 109 7 3 chr18 5655234 5655538 -80333396 - AluY SINE Alu -6 305 1 451 98 12 12 chr18 5655538 5655558 -80333376 + (TTCC)n Simple_repeat Simple_repeat 65 84 0 798 113 22 49 chr18 5655594 5655779 -80333155 + CT-rich Low_complexity Low_complexity 1 180 0 1503 196 7 0 chr18 5655785 5656061 -80332873 - AluJb SINE Alu -34 278 1 305 339 145 5 chr18 5657570 5657640 -80331294 - L3 LINE CR1 -19 1558 1499 1894 214 102 39 chr18 5657640 5658150 -80330784 - MLT1F LTR MaLR 0 542 1 305 339 145 5 chr18 5658150 5658265 -80330669 - L3 LINE CR1 -78 1499 1347 258 32 0 0 chr18 5659398 5659429 -80329505 + (TA)n Simple_repeat Simple_repeat 2 32 0 2481 60 0 3 chr18 5659429 5659730 -80329204 - AluY SINE Alu -11 300 1 538 252 7 52 chr18 5661201 5661356 -80327578 - MER5B DNA MER1_type -6 172 25 1574 198 80 46 chr18 5662804 5663243 -80325691 + MLT1C LTR MaLR 14 467 0 1494 193 31 0 chr18 5663553 5663807 -80325127 - AluJo SINE Alu -46 266 5 241 229 0 0 chr18 5663811 5663859 -80325075 - L1 LINE L1 -1153 4993 4946 1992 250 15 14 chr18 5663861 5664522 -80324412 - L1 LINE L1 -2771 3375 2714 903 260 62 87 chr18 5665248 5665752 -80323182 + L2 LINE L2 2812 3302 -11 320 260 75 75 chr18 5665727 5665927 -80323007 - L2 LINE L2 -2 3311 3112 * 2097 142 0 0 chr18 5666429 5666732 -80322202 + AluSx SINE Alu 1 303 -9 27 0 0 0 chr18 5667633 5667660 -80321274 + AT_rich Low_complexity Low_complexity 1 27 0 2080 148 23 0 chr18 5668372 5668723 -80320211 - L1PB4 LINE L1 -5 6151 5793 249 83 0 0 chr18 5668723 5668759 -80320175 + (TG)n Simple_repeat Simple_repeat 2 37 0 180 219 0 0 chr18 5668772 5668813 -80320121 + (TATATG)n Simple_repeat Simple_repeat 1 41 0 1008 128 32 0 chr18 5668838 5668994 -80319940 - L1PB4 LINE L1 -376 5780 5620 281 272 143 30 chr18 5669182 5669319 -80319615 + MIR SINE MIR 17 166 -86 416 244 35 26 chr18 5670352 5670467 -80318467 - L2 LINE L2 0 3313 3198 306 212 15 15 chr18 5670472 5670538 -80318396 - MIR SINE MIR -126 136 71 188 345 0 0 chr18 5670569 5670624 -80318310 - MIR SINE MIR -121 87 33 2011 126 0 10 chr18 5671350 5671643 -80317291 + AluSq SINE Alu 1 290 -23 217 265 24 12 chr18 5671861 5671944 -80316990 + (CATATA)n Simple_repeat Simple_repeat 2 85 0 2472 75 0 3 chr18 5672164 5672471 -80316463 + AluY SINE Alu 1 306 -5 805 321 78 45 chr18 5673042 5673490 -80315444 + L3 LINE CR1 838 1300 -277 728 161 21 114 chr18 5674107 5674300 -80314634 + FAM SINE Alu 1 175 0 583 329 34 10 chr18 5674832 5675039 -80313895 + L3 LINE CR1 920 1131 -446 2816 119 21 12 chr18 5675595 5676025 -80312909 - MER57B LTR ERV1 0 434 1 319 285 161 53 chr18 5676714 5677075 -80311859 - L2 LINE L2 -2 3311 2912 4861 50 125 0 chr18 5677280 5677943 -80310991 + L1PA8 LINE L1 5425 6170 -2 37 23 0 0 chr18 5677943 5677987 -80310947 + AT_rich Low_complexity Low_complexity 1 44 0 1205 14 0 0 chr18 5678148 5678286 -80310648 - L1PA2 LINE L1 -4 6151 6014 24 32 0 0 chr18 5679794 5679825 -80309109 + AT_rich Low_complexity Low_complexity 1 31 0 213 39 0 0 chr18 5681627 5681653 -80307281 + (CATA)n Simple_repeat Simple_repeat 2 27 0 209 279 0 47 chr18 5684365 5684451 -80304483 + L2 LINE L2 2997 3078 -194 4343 158 67 3 chr18 5684498 5685274 -80303660 - LTR1B LTR ERV1 0 826 1 647 308 20 5 chr18 5685716 5685914 -80303020 + MIR SINE MIR 61 261 -1 237 237 0 17 chr18 5686014 5686073 -80302861 - MIR SINE MIR -4 258 201 186 171 0 0 chr18 5686379 5686420 -80302514 + (CA)n Simple_repeat Simple_repeat 2 42 0 290 238 95 40 chr18 5687212 5687338 -80301596 - MIR SINE MIR -74 188 56 253 196 0 20 chr18 5687674 5687725 -80301209 + LTR40a LTR ERVL 90 139 -380 240 100 0 0 chr18 5687829 5687869 -80301065 + (TC)n Simple_repeat Simple_repeat 2 41 0 728 287 31 28 chr18 5687889 5688175 -80300759 + LTR40a LTR ERVL 203 489 -30 1306 189 0 13 chr18 5688180 5688408 -80300526 + MER8 DNA MER2_type 15 239 0 664 224 36 82 chr18 5688443 5688496 -80300438 + MER5A DNA MER1_type 1 55 -134 3062 30 5 0 chr18 5688496 5688865 -80300069 + L1PA2 LINE L1 5784 6154 -1 664 224 36 82 chr18 5688865 5688881 -80300053 + MER5A DNA MER1_type 55 70 -119 2464 80 0 0 chr18 5688881 5689192 -80299742 + AluY SINE Alu 1 311 0 664 224 36 82 chr18 5689192 5689317 -80299617 + MER5A DNA MER1_type 70 187 -2 21 0 0 0 chr18 5691050 5691071 -80297863 + AT_rich Low_complexity Low_complexity 1 21 0 5389 155 17 60 chr18 5691071 5693072 -80295862 - L1MA7 LINE L1 -1 6290 4377 386 185 185 8 chr18 5693110 5693229 -80295705 + L2 LINE L2 3174 3313 0 866 175 11 0 chr18 5694221 5694410 -80294524 + L1MB3 LINE L1 5993 6183 0 2413 81 0 0 chr18 5694730 5695027 -80293907 + AluSq SINE Alu 1 297 -16 2341 99 3 0 chr18 5695334 5695646 -80293288 + AluSq SINE Alu 1 313 0 359 338 40 35 chr18 5695683 5695884 -80293050 - MIR SINE MIR -55 207 6 453 50 0 0 chr18 5696087 5696147 -80292787 + (CA)n Simple_repeat Simple_repeat 2 61 0 231 36 0 0 chr18 5696163 5696191 -80292743 + (GA)n Simple_repeat Simple_repeat 1 28 0 333 0 0 0 chr18 5696493 5696508 -80292426 + (TG)n Simple_repeat Simple_repeat 1 52 0 333 0 0 0 chr18 5696508 5696545 -80292389 + (TG)n Simple_repeat Simple_repeat 1 37 0 336 311 117 11 chr18 5697538 5697718 -80291216 - MIR SINE MIR -4 258 60 2237 115 3 0 chr18 5697791 5698096 -80290838 - AluSx SINE Alu -6 306 1 367 331 57 26 chr18 5698096 5698331 -80290603 - MIR SINE MIR -20 242 3 339 250 0 0 chr18 5699830 5699902 -80289032 + MIR SINE MIR 85 156 -106 237 319 50 142 chr18 5700510 5700792 -80288142 + L2 LINE L2 2995 3250 -22 2373 73 0 0 chr18 5701811 5702097 -80286837 - AluSx SINE Alu -26 286 1 968 141 0 0 chr18 5702097 5702232 -80286702 - AluSq/x SINE Alu -178 135 1 296 179 0 36 chr18 5702464 5702520 -80286414 + Tigger5 DNA MER2_type 1 54 -2269 * 348 200 0 27 chr18 5702488 5702563 -80286371 + Tigger5 DNA MER2_type 2251 2323 0 358 225 56 0 chr18 5702604 5702693 -80286241 + Tigger5 DNA MER2_type 2230 2323 0 491 243 80 88 chr18 5703172 5703534 -80285400 - L2 LINE L2 0 3313 2955 289 341 72 47 chr18 5704498 5704774 -80284160 + L2 LINE L2 3015 3297 -16 511 259 148 32 chr18 5705160 5705376 -80283558 + MIR SINE MIR 22 262 0 275 245 0 0 chr18 5705919 5705972 -80282962 + L2 LINE L2 3258 3310 -3 1671 134 113 7 chr18 5707921 5708196 -80280738 - AluSc SINE Alu -5 304 1 208 224 0 52 chr18 5708809 5708867 -80280067 + MIR3 SINE MIR 120 174 -34 1418 150 7 17 chr18 5708942 5709229 -80279705 + L1MA8 LINE L1 6008 6291 0 195 114 0 0 chr18 5709642 5709677 -80279257 + (GA)n Simple_repeat Simple_repeat 1 35 0 24 0 0 0 chr18 5711492 5711516 -80277418 + AT_rich Low_complexity Low_complexity 1 24 0 1038 174 47 80 chr18 5712068 5712407 -80276527 + MER4-int LTR ERV1 3354 3681 -2917 * 3616 133 84 15 chr18 5712406 5713081 -80275853 + MER4-int LTR ERV1 3837 4558 -2040 1764 37 56 0 chr18 5713081 5713296 -80275638 + AluY SINE Alu 1 227 -84 17189 35 2 8 chr18 5713396 5715550 -80273384 - L1P LINE L1 -2223 3923 1783 22 0 0 0 chr18 5715988 5716010 -80272924 + AT_rich Low_complexity Low_complexity 1 22 0 962 265 103 23 chr18 5716193 5716904 -80272030 - L1ME3 LINE L1 -221 5945 5165 234 0 0 0 chr18 5717152 5717178 -80271756 + (CTG)n Simple_repeat Simple_repeat 2 27 0 223 312 54 21 chr18 5717728 5717821 -80271113 + L2 LINE L2 2995 3090 -182 2676 19 0 0 chr18 5718009 5718319 -80270615 + L1PA2 LINE L1 5844 6153 -2 479 295 57 57 chr18 5718635 5718845 -80270089 + MIR SINE MIR 43 252 -10 522 238 12 108 chr18 5720631 5720871 -80268063 - L2 LINE L2 0 3313 3097 2179 110 0 26 chr18 5721320 5721630 -80267304 + AluSg SINE Alu 1 302 -8 2485 65 0 7 chr18 5723473 5723781 -80265153 - AluY SINE Alu -5 306 1 521 342 106 33 chr18 5725364 5725665 -80263269 - L2 LINE L2 0 3272 2950 22 0 0 0 chr18 5729427 5729449 -80259485 + AT_rich Low_complexity Low_complexity 1 22 0 1964 151 3 0 chr18 5729450 5729734 -80259200 - AluSx SINE Alu -26 286 2 180 308 51 51 chr18 5730331 5730448 -80258486 - MIR3 SINE MIR -24 184 68 201 182 0 0 chr18 5731494 5731527 -80257407 + (TA)n Simple_repeat Simple_repeat 2 56 0 22 0 0 0 chr18 5731527 5731549 -80257385 + AT_rich Low_complexity Low_complexity 1 22 0 1046 190 0 69 chr18 5732208 5732424 -80256510 + AluJo SINE Alu 81 281 -31 23 33 0 0 chr18 5732424 5732454 -80256480 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr18 5732674 5732709 -80256225 + AT_rich Low_complexity Low_complexity 1 35 0 2362 110 0 0 chr18 5733640 5733950 -80254984 - AluSx SINE Alu -2 310 1 342 0 0 0 chr18 5733999 5734037 -80254897 + (TG)n Simple_repeat Simple_repeat 1 38 0 1464 142 67 28 chr18 5734116 5734369 -80254565 - AluJo SINE Alu -49 263 1 26 0 0 0 chr18 5734629 5734655 -80254279 + AT_rich Low_complexity Low_complexity 1 26 0 23 68 0 0 chr18 5735751 5735795 -80253139 + AT_rich Low_complexity Low_complexity 1 44 0 595 289 94 43 chr18 5736249 5736505 -80252429 - MER93a LTR ERV1 -71 331 63 426 348 108 37 chr18 5736734 5737271 -80251663 + L3 LINE CR1 676 1250 -327 272 341 136 17 chr18 5737928 5738104 -80250830 + L3 LINE CR1 1372 1568 -9 715 276 37 12 chr18 5738691 5738937 -80249997 + MIR SINE MIR 2 253 -9 2152 111 0 3 chr18 5738942 5739257 -80249677 - AluSc SINE Alu 0 314 1 32 26 0 0 chr18 5739463 5739502 -80249432 + AT_rich Low_complexity Low_complexity 1 39 0 451 98 12 12 chr18 5741129 5741190 -80247744 + (TTCC)n Simple_repeat Simple_repeat 3 66 -18 2166 109 7 3 chr18 5741190 5741494 -80247440 - AluY SINE Alu -6 305 1 451 98 12 12 chr18 5741494 5741514 -80247420 + (TTCC)n Simple_repeat Simple_repeat 65 84 0 789 111 33 39 chr18 5741550 5741731 -80247203 + CT-rich Low_complexity Low_complexity 1 180 0 1503 196 7 0 chr18 5741737 5742013 -80246921 - AluJb SINE Alu -34 278 1 305 339 145 5 chr18 5743522 5743592 -80245342 - L3 LINE CR1 -19 1558 1499 1894 214 102 39 chr18 5743592 5744102 -80244832 - MLT1F LTR MaLR 0 542 1 305 339 145 5 chr18 5744102 5744217 -80244717 - L3 LINE CR1 -78 1499 1347 258 32 0 0 chr18 5745350 5745381 -80243553 + (TA)n Simple_repeat Simple_repeat 2 32 0 2501 47 0 3 chr18 5745381 5745679 -80243255 - AluY SINE Alu -14 297 1 526 258 7 52 chr18 5747150 5747305 -80241629 - MER5B DNA MER1_type -6 172 25 1556 201 80 46 chr18 5748753 5749192 -80239742 + MLT1C LTR MaLR 14 467 0 1494 193 31 0 chr18 5749502 5749756 -80239178 - AluJo SINE Alu -46 266 5 241 229 0 0 chr18 5749760 5749808 -80239126 - L1 LINE L1 -1153 4993 4946 1988 242 18 17 chr18 5749810 5750471 -80238463 - L1 LINE L1 -2771 3375 2714 920 255 61 91 chr18 5751197 5751703 -80237231 + L2 LINE L2 2812 3302 -11 320 260 75 75 chr18 5751678 5751878 -80237056 - L2 LINE L2 -2 3311 3112 * 2097 142 0 0 chr18 5752380 5752683 -80236251 + AluSx SINE Alu 1 303 -9 27 0 0 0 chr18 5753584 5753611 -80235323 + AT_rich Low_complexity Low_complexity 1 27 0 2080 148 23 0 chr18 5754323 5754674 -80234260 - L1PB4 LINE L1 -5 6151 5793 249 83 0 0 chr18 5754674 5754710 -80234224 + (TG)n Simple_repeat Simple_repeat 2 37 0 180 219 0 0 chr18 5754723 5754764 -80234170 + (TATATG)n Simple_repeat Simple_repeat 1 41 0 964 163 29 6 chr18 5754767 5754939 -80233995 - L1PB4 LINE L1 -361 5795 5620 281 272 143 30 chr18 5755127 5755264 -80233670 + MIR SINE MIR 17 166 -86 416 244 35 26 chr18 5756297 5756412 -80232522 - L2 LINE L2 0 3313 3198 306 212 15 15 chr18 5756417 5756483 -80232451 - MIR SINE MIR -126 136 71 188 345 0 0 chr18 5756514 5756569 -80232365 - MIR SINE MIR -121 87 33 2024 126 0 10 chr18 5757295 5757588 -80231346 + AluSq SINE Alu 1 290 -23 217 265 24 12 chr18 5757806 5757889 -80231045 + (CATATA)n Simple_repeat Simple_repeat 2 85 0 2515 75 0 0 chr18 5758109 5758416 -80230518 + AluY SINE Alu 1 307 -4 800 330 76 42 chr18 5758987 5759435 -80229499 + L3 LINE CR1 838 1300 -277 717 181 16 109 chr18 5760052 5760245 -80228689 + FAM SINE Alu 1 175 0 583 329 34 10 chr18 5760778 5760985 -80227949 + L3 LINE CR1 920 1131 -446 2792 121 21 12 chr18 5761544 5761974 -80226960 - MER57B LTR ERV1 0 434 1 319 285 161 53 chr18 5762663 5763024 -80225910 - L2 LINE L2 -2 3311 2912 4886 48 125 0 chr18 5763229 5763892 -80225042 + L1PA8 LINE L1 5425 6170 -2 37 23 0 0 chr18 5763892 5763936 -80224998 + AT_rich Low_complexity Low_complexity 1 44 0 1231 14 0 0 chr18 5764097 5764239 -80224695 - L1PA2 LINE L1 0 6155 6014 24 32 0 0 chr18 5765747 5765778 -80223156 + AT_rich Low_complexity Low_complexity 1 31 0 213 39 0 0 chr18 5767580 5767606 -80221328 + (CATA)n Simple_repeat Simple_repeat 2 27 0 209 279 0 47 chr18 5770318 5770404 -80218530 + L2 LINE L2 2997 3078 -194 4343 158 67 3 chr18 5770451 5771227 -80217707 - LTR1B LTR ERV1 0 826 1 647 308 20 5 chr18 5771669 5771867 -80217067 + MIR SINE MIR 61 261 -1 237 237 0 17 chr18 5771967 5772026 -80216908 - MIR SINE MIR -4 258 201 186 171 0 0 chr18 5772330 5772371 -80216563 + (CA)n Simple_repeat Simple_repeat 2 42 0 290 238 95 40 chr18 5773163 5773289 -80215645 - MIR SINE MIR -74 188 56 253 196 0 20 chr18 5773625 5773676 -80215258 + LTR40a LTR ERVL 90 139 -380 240 100 0 0 chr18 5773780 5773820 -80215114 + (TC)n Simple_repeat Simple_repeat 2 41 0 748 283 31 28 chr18 5773840 5774126 -80214808 + LTR40a LTR ERVL 203 489 -30 1306 189 0 13 chr18 5774131 5774359 -80214575 + MER8 DNA MER2_type 15 239 0 667 213 35 86 chr18 5774394 5774447 -80214487 + MER5A DNA MER1_type 1 55 -134 3047 35 0 3 chr18 5774447 5774816 -80214118 + L1PA2 LINE L1 5784 6151 -4 667 213 35 86 chr18 5774816 5774832 -80214102 + MER5A DNA MER1_type 55 70 -119 2473 77 0 0 chr18 5774832 5775143 -80213791 + AluY SINE Alu 1 311 0 667 213 35 86 chr18 5775143 5775269 -80213665 + MER5A DNA MER1_type 70 187 -2 21 0 0 0 chr18 5777002 5777023 -80211911 + AT_rich Low_complexity Low_complexity 1 21 0 5389 155 17 60 chr18 5777023 5779024 -80209910 - L1MA7 LINE L1 -1 6290 4377 386 185 185 8 chr18 5779062 5779181 -80209753 + L2 LINE L2 3174 3313 0 884 175 11 0 chr18 5780173 5780362 -80208572 + L1MB3 LINE L1 5993 6183 0 2389 84 0 0 chr18 5780682 5780980 -80207954 + AluSq SINE Alu 1 298 -15 2298 97 7 0 chr18 5781286 5781596 -80207338 + AluSq SINE Alu 1 312 -1 359 338 40 35 chr18 5781633 5781834 -80207100 - MIR SINE MIR -55 207 6 345 62 0 0 chr18 5782038 5782086 -80206848 + (CA)n Simple_repeat Simple_repeat 2 49 0 231 36 0 0 chr18 5782102 5782130 -80206804 + (GA)n Simple_repeat Simple_repeat 1 28 0 330 283 9 19 chr18 5782432 5782447 -80206487 + GA-rich Low_complexity Low_complexity 4 18 -90 297 0 0 0 chr18 5782447 5782480 -80206454 + (TG)n Simple_repeat Simple_repeat 1 33 0 330 283 9 19 chr18 5782480 5782570 -80206364 + GA-rich Low_complexity Low_complexity 18 108 0 336 308 116 15 chr18 5783473 5783671 -80205263 - MIR SINE MIR -4 258 41 2311 105 3 0 chr18 5783726 5784030 -80204904 - AluSx SINE Alu -7 305 1 345 333 57 26 chr18 5784030 5784265 -80204669 - MIR SINE MIR -20 242 3 339 250 0 0 chr18 5785764 5785836 -80203098 + MIR SINE MIR 85 156 -106 230 312 60 153 chr18 5786444 5786726 -80202208 + L2 LINE L2 2995 3250 -22 2373 73 0 0 chr18 5787745 5788031 -80200903 - AluSx SINE Alu -26 286 1 968 141 0 0 chr18 5788031 5788166 -80200768 - AluSq/x SINE Alu -177 135 1 296 179 0 36 chr18 5788398 5788454 -80200480 + Tigger5 DNA MER2_type 1 54 -2269 * 348 200 0 27 chr18 5788422 5788497 -80200437 + Tigger5 DNA MER2_type 2251 2323 0 358 225 56 0 chr18 5788538 5788627 -80200307 + Tigger5 DNA MER2_type 2230 2323 0 491 243 80 88 chr18 5789106 5789468 -80199466 - L2 LINE L2 0 3313 2955 289 341 72 47 chr18 5790432 5790708 -80198226 + L2 LINE L2 3015 3297 -16 511 259 148 32 chr18 5791094 5791310 -80197624 + MIR SINE MIR 22 262 0 275 245 0 0 chr18 5791853 5791906 -80197028 + L2 LINE L2 3258 3310 -3 1671 134 113 7 chr18 5793855 5794130 -80194804 - AluSc SINE Alu -5 304 1 208 224 0 52 chr18 5794743 5794801 -80194133 + MIR3 SINE MIR 120 174 -34 1421 156 3 17 chr18 5794876 5795164 -80193770 + L1MA8 LINE L1 6008 6291 0 27 49 0 0 chr18 5796370 5796411 -80192523 + AT_rich Low_complexity Low_complexity 1 41 0 261 0 0 0 chr18 5796733 5796762 -80192172 + (CA)n Simple_repeat Simple_repeat 2 30 0 3049 191 29 40 chr18 5797852 5797912 -80191022 + L1MA7 LINE L1 4688 4747 -1544 1914 143 3 10 chr18 5797912 5798226 -80190708 + AluSx SINE Alu 1 312 0 3049 191 29 40 chr18 5798226 5798676 -80190258 + L1MA7 LINE L1 4747 5200 -1091 2007 90 49 3 chr18 5798676 5798964 -80189970 + AluY SINE Alu 1 301 -10 3049 191 29 40 chr18 5798964 5799570 -80189364 + L1MA7 LINE L1 5200 5786 -505 11353 190 39 9 chr18 5799572 5802919 -80186015 + L1PA15 LINE L1 2706 6144 -21 1685 154 22 36 chr18 5802919 5803274 -80185660 + L1MA7 LINE L1 5939 6291 0 11353 190 39 9 chr18 5803274 5803291 -80185643 + L1PA15 LINE L1 6144 6159 -6 595 279 52 0 chr18 5803594 5803766 -80185168 - L1ME1 LINE L1 -106 6060 5880 244 295 0 0 chr18 5803770 5803831 -80185103 + MER34C LTR ERV1 41 101 -484 317 180 118 101 chr18 5804050 5804228 -80184706 + MER34B LTR ERV1 385 565 0 2430 244 72 26 chr18 5804229 5805741 -80183193 - L1ME1 LINE L1 -284 5882 4303 * 3772 256 48 14 chr18 5805717 5807123 -80181811 - L1ME1 LINE L1 -2424 3722 2269 478 353 141 8 chr18 5807230 5807698 -80181236 + L2 LINE L2 2436 2965 -349 519 307 14 21 chr18 5807775 5807915 -80181019 - L2 LINE L2 0 3272 3134 681 248 133 63 chr18 5808974 5809357 -80179577 - MLT1H LTR MaLR -3 546 137 2075 80 69 0 chr18 5809533 5809809 -80179125 - AluY SINE Alu -16 295 1 2061 111 4 0 chr18 5809866 5810145 -80178789 + AluSp SINE Alu 1 280 -33 246 32 0 0 chr18 5810145 5810176 -80178758 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 215 246 14 58 chr18 5812705 5812774 -80176160 + L2 LINE L2 3182 3247 -66 2009 69 0 44 chr18 5812776 5813050 -80175884 + AluY SINE Alu 49 310 -1 1792 165 17 7 chr18 5813101 5813398 -80175536 - AluSx SINE Alu -11 301 2 390 351 8 15 chr18 5814169 5814303 -80174631 + L2 LINE L2 3181 3313 0 281 339 46 9 chr18 5814416 5814525 -80174409 - L2 LINE L2 -3 3269 3157 1484 149 30 15 chr18 5815131 5815399 -80173535 + L1PA10 LINE L1 5893 6164 -4 1069 179 9 22 chr18 5815892 5816116 -80172818 - Tigger7 DNA MER2_type 0 2491 2271 * 1625 203 29 3 chr18 5816091 5816401 -80172533 - Tigger7 DNA MER2_type -232 318 1 186 43 0 0 chr18 5817821 5817844 -80171090 + (TC)n Simple_repeat Simple_repeat 2 24 0 232 315 185 20 chr18 5817857 5818003 -80170931 + MIR SINE MIR 83 252 -10 2544 50 0 0 chr18 5818934 5819231 -80169703 + AluY SINE Alu 1 297 -14 1553 38 0 0 chr18 5819525 5819708 -80169226 + L1PA7 LINE L1 5961 6143 -11 25 31 0 0 chr18 5819728 5819760 -80169174 + AT_rich Low_complexity Low_complexity 1 32 0 553 259 178 0 chr18 5820096 5820270 -80168664 - MIR SINE MIR 0 262 58 182 373 0 0 chr18 5820528 5820579 -80168355 - L2 LINE L2 -12 3260 3210 304 283 20 50 chr18 5820605 5820704 -80168230 - MIR SINE MIR -161 101 6 313 335 88 15 chr18 5822369 5822567 -80166367 - MIR SINE MIR -12 250 31 710 311 81 38 chr18 5822746 5823901 -80165033 + L1 LINE L1 3120 4323 -1823 4481 205 57 66 chr18 5823930 5824309 -80164625 + L1MC4a LINE L1 6243 6624 -1184 387 0 0 0 chr18 5824309 5824352 -80164582 + (TG)n Simple_repeat Simple_repeat 2 44 0 4481 205 57 66 chr18 5824352 5825362 -80163572 + L1MC4a LINE L1 6624 7619 -189 445 171 12 0 chr18 5825359 5825441 -80163493 + L1MA9 LINE L1 5944 6026 -286 * 540 330 41 25 chr18 5825462 5825829 -80163105 + L1ME3 LINE L1 5769 6141 -21 222 288 0 41 chr18 5828344 5828417 -80160517 - L2 LINE L2 -17 3255 3186 194 172 23 23 chr18 5829581 5829668 -80159266 + (TA)n Simple_repeat Simple_repeat 1 87 0 2877 164 119 8 chr18 5830007 5830597 -80158337 + MER39 LTR ERV1 53 707 0 315 0 0 0 chr18 5830797 5830832 -80158102 + (A)n Simple_repeat Simple_repeat 1 35 0 3854 195 62 31 chr18 5830835 5831713 -80157221 + L1MD2 LINE L1 5445 6349 -10 2339 278 131 50 chr18 5831716 5831786 -80157148 + L2 LINE L2 1697 1760 -1553 2752 7 0 0 chr18 5831786 5832082 -80156852 - AluYb8 SINE Alu 0 318 23 2339 278 131 50 chr18 5832082 5833287 -80155647 + L2 LINE L2 1760 2866 -447 228 135 0 0 chr18 5833287 5833324 -80155610 + (TG)n Simple_repeat Simple_repeat 2 38 0 2339 278 131 50 chr18 5833324 5833360 -80155574 + L2 LINE L2 2866 2898 -415 1883 120 15 0 chr18 5833360 5833626 -80155308 - AluSx SINE Alu -3 309 40 2339 278 131 50 chr18 5833626 5833779 -80155155 + L2 LINE L2 2898 3313 0 840 317 87 30 chr18 5834268 5834728 -80154206 - L2 LINE L2 -3 3310 2825 325 278 35 35 chr18 5835262 5835377 -80153557 - L2 LINE L2 -575 2739 2625 272 356 0 0 chr18 5835377 5835478 -80153456 + LTR48B LTR ERV1 1 101 -543 * 1130 227 95 48 chr18 5835452 5835867 -80153067 + MER39 LTR ERV1 214 686 -21 443 315 48 99 chr18 5835867 5836410 -80152524 - L2 LINE L2 -668 2646 2132 1761 133 89 4 chr18 5836908 5837179 -80151755 + AluSq SINE Alu 1 294 -19 5482 179 23 4 chr18 5837492 5838978 -80149956 + L1MB3 LINE L1 4662 6181 -2 313 208 23 44 chr18 5838969 5839116 -80149818 + L1M4 LINE L1 70 497 -6358 * 272 279 64 118 chr18 5839233 5839673 -80149261 + L1M4 LINE L1 798 1213 -5642 7773 20 0 0 chr18 5839693 5840627 -80148307 + L1PA3 LINE L1 5218 6151 -4 334 241 135 43 chr18 5840673 5840814 -80148120 + L1M4 LINE L1 1230 1383 -5476 * 2295 187 0 0 chr18 5840808 5841262 -80147672 - L1P LINE L1 -2936 3210 2757 616 267 22 0 chr18 5841352 5841532 -80147402 + L1M4 LINE L1 3737 3920 -3037 888 245 31 19 chr18 5841538 5841799 -80147135 + L1MB8 LINE L1 5913 6176 -2 792 189 37 21 chr18 5842667 5842857 -80146077 + MER106A DNA MER1_type 44 236 0 234 0 0 0 chr18 5843216 5843242 -80145692 + (A)n Simple_repeat Simple_repeat 1 26 0 2072 94 0 0 chr18 5843811 5844076 -80144858 + AluY SINE Alu 33 297 -14 1801 154 65 37 chr18 5844484 5844845 -80144089 + MLT2D LTR ERVL 1 376 -38 339 25 0 0 chr18 5844845 5844885 -80144049 + (CA)n Simple_repeat Simple_repeat 1 40 0 1801 154 65 37 chr18 5844885 5844926 -80144008 + MLT2D LTR ERVL 376 414 0 202 333 58 33 chr18 5845251 5845371 -80143563 - MIR SINE MIR -63 145 23 303 299 37 0 chr18 5845409 5845516 -80143418 + (TATG)n Simple_repeat Simple_repeat 2 112 0 23 33 0 0 chr18 5845671 5845701 -80143233 + AT_rich Low_complexity Low_complexity 1 30 0 216 0 0 0 chr18 5846021 5846045 -80142889 + (A)n Simple_repeat Simple_repeat 1 24 0 202 324 110 48 chr18 5846117 5846661 -80142273 - L2 LINE L2 -555 2759 2182 243 330 169 8 chr18 5847309 5847427 -80141507 - L2 LINE L2 0 3272 3136 234 306 148 0 chr18 5848495 5848603 -80140331 - L2 LINE L2 -1 3271 3148 2302 106 0 3 chr18 5848849 5849160 -80139774 + AluSx SINE Alu 1 310 -2 266 315 88 73 chr18 5849279 5849552 -80139382 - L2 LINE L2 -527 2787 2511 205 211 39 0 chr18 5850069 5850121 -80138813 - L2 LINE L2 -927 2387 2334 442 278 110 74 chr18 5850232 5850732 -80138202 + HAL1b LINE L1 249 766 -582 203 156 0 0 chr18 5853337 5853369 -80135565 + (CA)n Simple_repeat Simple_repeat 1 32 0 389 285 75 12 chr18 5853956 5854150 -80134784 + L1ME LINE L1 5515 5724 -397 44 84 0 0 chr18 5854247 5854354 -80134580 + AT_rich Low_complexity Low_complexity 1 107 0 209 245 0 0 chr18 5855428 5855482 -80133452 + GA-rich Low_complexity Low_complexity 3 94 0 2281 111 42 36 chr18 5857996 5858357 -80130577 - THE1B LTR MaLR 0 364 2 245 299 284 0 chr18 5858389 5858523 -80130411 + MIR SINE MIR 2 173 -89 250 267 30 50 chr18 5859668 5859769 -80129165 + MIR3 SINE MIR 1 99 -109 192 315 27 0 chr18 5860490 5860563 -80128371 + MIR SINE MIR 179 253 -9 189 0 0 0 chr18 5861256 5861277 -80127657 + (CAATA)n Simple_repeat Simple_repeat 5 25 0 1823 98 16 8 chr18 5863890 5864128 -80124806 + AluSg SINE Alu 38 280 -30 441 0 0 0 chr18 5864128 5864177 -80124757 + (CA)n Simple_repeat Simple_repeat 1 49 0 281 324 173 28 chr18 5864430 5864794 -80124140 - L2 LINE L2 -829 2485 2069 4222 156 7 12 chr18 5864995 5865739 -80123195 + L1MB2 LINE L1 5430 6169 -2 268 226 85 9 chr18 5865786 5865892 -80123042 + L1ME4a LINE L1 6002 6115 -6 238 356 93 25 chr18 5866160 5866278 -80122656 - L2 LINE L2 0 3272 3147 3285 156 60 7 chr18 5866409 5867011 -80121923 - L1MC1 LINE L1 -6 6327 5694 909 316 66 66 chr18 5868908 5869911 -80119023 + L2 LINE L2 2239 3257 -56 2209 127 6 12 chr18 5869911 5870250 -80118684 - MER1B DNA MER1_type 0 337 1 909 316 66 66 chr18 5870250 5870307 -80118627 + L2 LINE L2 3257 3313 0 646 314 38 17 chr18 5873194 5873433 -80115501 + MIR SINE MIR 19 262 0 2201 106 0 0 chr18 5875032 5875333 -80113601 - AluSc SINE Alu -8 301 1 409 321 72 27 chr18 5875548 5875769 -80113165 - MIR SINE MIR -27 235 5 243 286 33 11 chr18 5876966 5877057 -80111877 - MER5A DNA MER1_type -96 93 1 275 100 25 0 chr18 5878163 5878203 -80110731 + MER5A DNA MER1_type 119 159 -30 263 336 41 55 chr18 5878669 5878815 -80110119 - MIR SINE MIR -70 192 49 23 54 0 0 chr18 5879796 5879833 -80109101 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr18 5879889 5879913 -80109021 + AT_rich Low_complexity Low_complexity 1 24 0 3394 132 82 7 chr18 5881948 5882523 -80106411 - MER51A LTR ERV1 -16 618 1 338 256 51 17 chr18 5882577 5882694 -80106240 - MIR SINE MIR -74 188 68 1772 109 0 16 chr18 5883700 5883947 -80104987 + AluSx SINE Alu 1 243 -69 354 23 0 0 chr18 5883964 5884007 -80104927 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 207 365 0 0 chr18 5884024 5884098 -80104836 - L2 LINE L2 -7 3265 3192 324 300 95 52 chr18 5884710 5885037 -80103897 + L1ME LINE L1 5305 5645 -2163 336 24 0 0 chr18 5885064 5885105 -80103829 + (CA)n Simple_repeat Simple_repeat 2 42 0 254 159 23 68 chr18 5885119 5885207 -80103727 + L1ME LINE L1 5718 5801 -365 1270 80 15 0 chr18 5885695 5885895 -80103039 - L1P5 LINE L1 -670 5481 5279 3047 136 8 11 chr18 5885895 5886418 -80102516 + L1PB1 LINE L1 5631 6151 0 496 237 59 54 chr18 5886657 5886843 -80102091 + L1ME3A LINE L1 5523 5709 -461 269 179 71 0 chr18 5886874 5886930 -80102004 + L1ME3A LINE L1 5810 5869 -301 767 240 70 57 chr18 5887022 5887322 -80101612 + LTR16A LTR ERVL 138 441 -9 1091 264 123 24 chr18 5887626 5888089 -80100845 - MLT1G1 LTR MaLR -2 593 85 1138 329 100 19 chr18 5888269 5889078 -80099856 + HERV16 LTR ERVL 491 1365 -3631 379 332 106 9 chr18 5889494 5889711 -80099223 + LTR16A LTR ERVL 207 444 -6 740 267 36 36 chr18 5889716 5889997 -80098937 + L1ME3A LINE L1 5881 6161 -9 236 306 188 11 chr18 5890109 5890295 -80098639 + MIR SINE MIR 29 247 -15 2108 117 7 7 chr18 5890545 5890843 -80098091 + AluSx SINE Alu 1 298 -14 293 362 24 8 chr18 5890925 5891052 -80097882 + MIR SINE MIR 22 150 -112 225 182 0 0 chr18 5891121 5891176 -80097758 - L1MC4 LINE L1 -1336 6706 6652 485 242 62 8 chr18 5891772 5891900 -80097034 + MIR SINE MIR 49 183 -79 249 291 13 0 chr18 5892883 5892962 -80095972 + MIR SINE MIR 1 80 -182 1376 156 137 35 chr18 5893148 5893583 -80095351 + Charlie1b DNA MER1_type 40 523 0 229 238 57 67 chr18 5893604 5893709 -80095225 + L1ME4a LINE L1 5 108 -6318 1799 257 37 49 chr18 5893879 5895203 -80093731 + L1ME4a LINE L1 292 1596 -4830 473 151 0 0 chr18 5895225 5895298 -80093636 - THE1B LTR MaLR 0 364 292 1225 66 30 12 chr18 5895300 5895466 -80093468 - THE1B LTR MaLR -195 169 1 1730 241 109 35 chr18 5895471 5896546 -80092388 + L1ME4a LINE L1 1869 3023 -3403 301 324 93 50 chr18 5896581 5896902 -80092032 + L2 LINE L2 2049 2383 -931 1202 235 90 59 chr18 5897149 5897639 -80091295 - MLT1D LTR MaLR 0 505 1 311 269 71 107 chr18 5897645 5897804 -80091130 + L1ME4a LINE L1 5744 5888 -513 2055 140 0 16 chr18 5897804 5898119 -80090815 - AluSx SINE Alu -2 310 1 311 269 71 107 chr18 5898119 5898268 -80090666 + L1ME4a LINE L1 5888 6041 -360 25 65 0 0 chr18 5898280 5898326 -80090608 + AT_rich Low_complexity Low_complexity 1 46 0 350 338 62 0 chr18 5898335 5898495 -80090439 + L1ME4a LINE L1 6057 6226 -175 26 30 0 0 chr18 5898738 5898771 -80090163 + AT_rich Low_complexity Low_complexity 1 33 0 180 0 0 0 chr18 5899959 5899979 -80088955 + (A)n Simple_repeat Simple_repeat 1 20 0 2160 115 3 0 chr18 5899979 5900267 -80088667 + AluSg SINE Alu 1 289 -21 403 271 8 51 chr18 5901722 5901840 -80087094 - L2 LINE L2 -2 3311 3199 338 264 98 45 chr18 5902619 5902865 -80086069 + MIR SINE MIR 4 262 0 2109 155 42 35 chr18 5904212 5904407 -80084527 + MSTA LTR MaLR 1 193 -235 2121 121 0 3 chr18 5904407 5904697 -80084237 + AluSx SINE Alu 1 289 -23 2109 155 42 35 chr18 5904697 5904926 -80084008 + MSTA LTR MaLR 193 428 0 390 291 104 62 chr18 5905610 5906108 -80082826 + L1ME3 LINE L1 5429 5947 -215 318 257 22 73 chr18 5906456 5906592 -80082342 + MIR3 SINE MIR 53 181 -27 402 39 0 0 chr18 5906602 5906654 -80082280 + (TG)n Simple_repeat Simple_repeat 1 52 0 251 130 0 56 chr18 5906684 5906738 -80082196 - L1MA9 LINE L1 -1 6311 6261 1181 150 164 9 chr18 5908598 5908697 -80080237 - L1MA9 LINE L1 -20 6280 6198 333 0 0 0 chr18 5908697 5908734 -80080200 + (TG)n Simple_repeat Simple_repeat 1 37 0 1181 150 164 9 chr18 5908734 5908932 -80080002 - L1MA9 LINE L1 -102 6198 5945 334 256 74 91 chr18 5909260 5909436 -80079498 + MIR3 SINE MIR 30 202 -6 182 130 241 19 chr18 5909662 5909716 -80079218 - L2 LINE L2 -55 3258 3193 281 267 44 0 chr18 5910345 5910435 -80078499 + MLT1G LTR MaLR 474 567 -23 191 321 109 64 chr18 5911040 5911460 -80077474 - L2 LINE L2 -457 2857 2419 995 178 16 5 chr18 5912423 5912608 -80076326 - MER5A DNA MER1_type 0 189 3 422 333 24 12 chr18 5912618 5912783 -80076151 - MER5B DNA MER1_type -4 174 8 1726 174 75 3 chr18 5913459 5913780 -80075154 + MER2 DNA MER2_type 1 344 0 987 51 0 0 chr18 5914448 5914566 -80074368 + AluY SINE Alu 191 308 -3 208 308 33 22 chr18 5914959 5915050 -80073884 - MIR3 SINE MIR -11 197 106 1278 166 5 27 chr18 5915632 5915855 -80073079 + AluJo SINE Alu 2 219 -93 628 304 119 14 chr18 6015915 6016562 -79972372 + L1ME4a LINE L1 5269 6037 -84 555 284 43 26 chr18 6016601 6016833 -79972101 - MER106A DNA MER1_type 0 236 1 1120 147 6 0 chr18 6016895 6017058 -79971876 - AluSg/x SINE Alu -30 282 119 16757 57 1 1 chr18 6017158 6019317 -79969617 + L1P LINE L1 3094 5252 -894 10539 62 8 11 chr18 6019418 6020849 -79968085 + L1PA3 LINE L1 3274 4701 -1445 6731 45 21 0 chr18 6020853 6022055 -79966879 + L1PA3 LINE L1 4935 6155 0 1217 158 24 2 chr18 6022055 6023449 -79965485 - ALR/Alpha Satellite centromeric -1 1424 1 1201 162 3 2 chr18 6023590 6029503 -79959431 - ALR/Alpha Satellite centromeric -1 5922 1 22171 85 1 3 chr18 6029615 6032624 -79956310 - L1P LINE L1 -3144 3002 1 1176 158 3 0 chr18 6032624 6036399 -79952535 + ALR/Alpha Satellite centromeric 1 3785 -14 1163 157 6 0 chr18 6036413 6041054 -79947880 + ALR/Alpha Satellite centromeric 1 4666 -27 1125 173 5 3 chr18 6041177 6052331 -79936603 - ALR/Alpha Satellite centromeric 0 11182 1 1028 173 6 1 chr18 6052374 6054061 -79934873 - ALR/Alpha Satellite centromeric -6 1695 1 41587 58 6 5 chr18 6054063 6060207 -79928727 - L1PA4 LINE L1 -3 6152 1 1089 167 7 4 chr18 6060211 6061856 -79927078 - ALR/Alpha Satellite centromeric 0 8296 6657 2883 13 0 0 chr18 6061856 6062171 -79926763 + AluYb8 SINE Alu 1 315 -3 1089 167 7 4 chr18 6062171 6068485 -79920449 - ALR/Alpha Satellite centromeric -1639 6657 1 1219 99 5 42 chr18 6068486 6068677 -79920257 + LTR5 LTR ERVK 1 184 -785 2683 125 3 0 chr18 6068687 6069079 -79919855 + LTR5 LTR ERVK 577 969 0 982 158 16 2 chr18 6069079 6069577 -79919357 - ALR/Alpha Satellite centromeric 0 504 1 1074 180 2 3 chr18 6069589 6071815 -79917119 - ALR/Alpha Satellite centromeric 0 2225 1 1143 173 5 4 chr18 6071827 6074889 -79914045 + ALR/Alpha Satellite centromeric 1 3063 -8 1107 163 3 0 chr18 6074992 6078713 -79910221 + ALR/Alpha Satellite centromeric 1 3730 -51 1185 154 2 1 chr18 6078816 6087792 -79901142 + ALR/Alpha Satellite centromeric 1 8990 -67 3359 71 2 4 chr18 6087800 6088251 -79900683 - L1PA3 LINE L1 -3 6152 5703 1210 171 1 0 chr18 6088364 6090011 -79898923 + ALR/Alpha Satellite centromeric 1 1648 -43 2245 83 0 0 chr18 6090124 6090402 -79898532 - AluY SINE Alu -29 282 5 1064 167 1 0 chr18 6090406 6091030 -79897904 + ALR/Alpha Satellite centromeric 1 624 -13 1201 153 3 2 chr18 6091042 6105809 -79883125 + ALR/Alpha Satellite centromeric 1 14786 0 1213 150 5 2 chr18 6105820 6119525 -79869409 + ALR/Alpha Satellite centromeric 1 13733 -20 15767 85 1 4 chr18 6119629 6121744 -79867190 - L1P LINE L1 -4038 2108 1 1279 143 3 2 chr18 6121745 6126531 -79862403 - ALR/Alpha Satellite centromeric 0 12484 7705 985 56 0 0 chr18 6126531 6126656 -79862278 + L1PA3 LINE L1 6026 6150 -5 1279 143 3 2 chr18 6126656 6134216 -79854718 - ALR/Alpha Satellite centromeric -4779 7705 1 1157 144 2 5 chr18 6134318 6135491 -79853443 - ALR/Alpha Satellite centromeric -1 1169 1 3218 80 32 74 chr18 6136105 6136802 -79852132 + SVA Other Other 339 868 -592 276 240 23 52 chr18 6136898 6137131 -79851803 + ALR/Alpha Satellite centromeric 1 226 -19 1302 144 4 3 chr18 6137444 6143462 -79845472 + ALR/Alpha Satellite centromeric 1 6026 -44 1191 164 4 1 chr18 6143588 6150582 -79838352 + ALR/Alpha Satellite centromeric 1 7013 0 1181 159 3 1 chr18 6150687 6159985 -79828949 - ALR/Alpha Satellite centromeric 0 9316 1 39564 63 37 2 chr18 6159985 6165203 -79823731 + L1P LINE L1 1 5397 -749 1127 171 7 0 chr18 6165322 6167937 -79820997 + ALR/Alpha Satellite centromeric 1 2632 -31 1155 146 4 3 chr18 6168041 6173697 -79815237 - ALR/Alpha Satellite centromeric 0 5662 1 1162 163 8 3 chr18 6173725 6183606 -79805328 + ALR/Alpha Satellite centromeric 1 9933 -26 257 50 0 25 chr18 6183607 6183647 -79805287 + (TTTTA)n Simple_repeat Simple_repeat 1 39 0 25478 60 1 3 chr18 6183647 6189794 -79799140 - L1PA3 LINE L1 -24 6131 2 1090 153 9 2 chr18 6189794 6191594 -79797340 + ALR/Alpha Satellite centromeric 1 1813 -33 1046 176 3 1 chr18 6191723 6193729 -79795205 + ALR/Alpha Satellite centromeric 1 2010 -27 2412 30 0 0 chr18 6193733 6194029 -79794905 - L1PA3 LINE L1 -3060 3086 2791 18842 36 2 0 chr18 6194029 6197112 -79791822 + L1PA3 LINE L1 3066 6155 0 1142 159 5 3 chr18 6197119 6200309 -79788625 + ALR/Alpha Satellite centromeric 1 3195 -26 453 39 39 51 chr18 6200315 6200393 -79788541 + L1PA4 LINE L1 6077 6153 -2 1093 135 11 0 chr18 6200394 6201121 -79787813 + ALR/Alpha Satellite centromeric 1 734 -51 1120 163 7 3 chr18 6201228 6205256 -79783678 - ALR/Alpha Satellite centromeric -7 4042 1 988 173 11 5 chr18 6205267 6207718 -79781216 - ALR/Alpha Satellite centromeric 0 2465 1 1004 178 5 2 chr18 6207838 6209459 -79779475 + ALR/Alpha Satellite centromeric 1 1624 -6 1028 172 4 2 chr18 6209471 6212541 -79776393 + ALR/Alpha Satellite centromeric 1 3075 -11 1038 176 7 0 chr18 6212552 6213820 -79775114 + ALR/Alpha Satellite centromeric 1 1276 -13 41026 69 4 1 chr18 6213833 6219964 -79768970 - L1PA4 LINE L1 -3 6152 7 1069 160 9 2 chr18 6219964 6221819 -79767115 - ALR/Alpha Satellite centromeric -8 1867 1 22599 70 7 6 chr18 6221839 6224820 -79764114 - L1P LINE L1 -3160 2986 4 1117 168 4 4 chr18 6224820 6231067 -79757867 - ALR/Alpha Satellite centromeric 0 6249 1 21 0 0 0 chr18 6231199 6231220 -79757714 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr18 6231249 6231270 -79757664 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr18 6231404 6231433 -79757501 + AT_rich Low_complexity Low_complexity 1 29 0 1190 153 11 4 chr18 6231543 6233891 -79755043 + ALR/Alpha Satellite centromeric 1 2364 -23 13522 42 1 2 chr18 6233898 6236337 -79752597 - L1PA3 LINE L1 0 6155 3717 11271 45 6 0 chr18 6236338 6237798 -79751136 + L1PA3 LINE L1 2228 3695 -2451 457 217 14 42 chr18 6237798 6237941 -79750993 + ALR/Alpha Satellite centromeric 33 171 0 * 1216 149 7 2 chr18 6237815 6249948 -79738986 + ALR/Alpha Satellite centromeric 1 12192 -29 15716 57 1 1 chr18 6250071 6252096 -79736838 - L1P LINE L1 -971 5175 3153 6558 83 1 2 chr18 6252096 6253601 -79735333 + L1PA4 LINE L1 4648 6153 -2 1099 164 8 1 chr18 6253843 6256130 -79732804 - ALR/Alpha Satellite centromeric 0 2302 1 1186 148 6 4 chr18 6256241 6260195 -79728739 - ALR/Alpha Satellite centromeric 0 3959 1 1182 155 9 2 chr18 6260207 6262544 -79726390 - ALR/Alpha Satellite centromeric 0 2741 353 190 0 67 0 chr18 6262544 6262574 -79726360 + (AAATG)n Simple_repeat Simple_repeat 4 35 0 1182 155 9 2 chr18 6262574 6262930 -79726004 - ALR/Alpha Satellite centromeric -2388 353 1 1064 158 8 2 chr18 6263071 6264333 -79724601 - ALR/Alpha Satellite centromeric 0 1270 1 272 214 12 71 chr18 6264455 6264623 -79724311 - ALR/Alpha Satellite centromeric 0 172 15 1117 166 22 11 chr18 6264639 6265509 -79723425 - ALR/Alpha Satellite centromeric -23 879 1 1180 154 9 2 chr18 6265681 6270196 -79718738 - ALR/Alpha Satellite centromeric -1 4544 1 1147 160 4 5 chr18 6270296 6275119 -79713815 + ALR/Alpha Satellite centromeric 1 5102 -2934 2239 81 42 0 chr18 6275119 6275403 -79713531 + AluY SINE Alu 4 299 -12 1147 160 4 5 chr18 6275403 6278337 -79710597 + ALR/Alpha Satellite centromeric 5102 8036 0 1203 150 12 4 chr18 6278352 6282811 -79706123 + ALR/Alpha Satellite centromeric 1 4493 -43 1245 142 8 3 chr18 6282930 6288813 -79700121 + ALR/Alpha Satellite centromeric 1 6235 -2569 1875 153 3 3 chr18 6288813 6289113 -79699821 + AluY SINE Alu 2 301 -10 1245 142 8 3 chr18 6289113 6291695 -79697239 + ALR/Alpha Satellite centromeric 6235 8804 0 1157 164 6 15 chr18 6291852 6292428 -79696506 + ALR/Alpha Satellite centromeric 1 675 -326 886 45 0 0 chr18 6292428 6292539 -79696395 + L1PA2 LINE L1 6043 6153 -2 1157 164 6 15 chr18 6292539 6292859 -79696075 + ALR/Alpha Satellite centromeric 675 997 -4 1253 161 5 3 chr18 6292871 6311315 -79677619 - ALR/Alpha Satellite centromeric -3 18486 1 5212 35 0 0 chr18 6311315 6311939 -79676995 - L1PA3 LINE L1 -1493 4653 4030 7508 29 0 1 chr18 6311939 6313445 -79675489 + L1PA3 LINE L1 4666 6171 0 1024 172 2 3 chr18 6313480 6315453 -79673481 - ALR/Alpha Satellite centromeric 0 1969 1 1109 166 4 3 chr18 6315468 6324619 -79664315 - ALR/Alpha Satellite centromeric 0 9164 1 1040 177 3 4 chr18 6324630 6327685 -79661249 - ALR/Alpha Satellite centromeric -7 3052 1 1016 176 2 1 chr18 6327698 6328966 -79659968 - ALR/Alpha Satellite centromeric -1 1269 1 27 49 0 0 chr18 6328991 6329032 -79659902 + AT_rich Low_complexity Low_complexity 1 41 0 2196 144 11 11 chr18 6329032 6329407 -79659527 - L1PB1 LINE L1 -8 6143 5769 2875 27 0 0 chr18 6329427 6329764 -79659170 - L1PA2 LINE L1 -5 6150 5814 1041 166 10 13 chr18 6329773 6333246 -79655688 - ALR/Alpha Satellite centromeric -1 3464 1 6275 46 0 0 chr18 6333248 6334057 -79654877 - L1PA3 LINE L1 -2853 3293 2485 * 11415 51 0 3 chr18 6334056 6336771 -79652163 + L1PA3 LINE L1 3308 6154 -1 1160 169 8 3 chr18 6336781 6341770 -79647164 - ALR/Alpha Satellite centromeric 0 5012 1 1219 168 6 1 chr18 6341781 6348781 -79640153 - ALR/Alpha Satellite centromeric 0 7039 1 1160 167 8 6 chr18 6348793 6350686 -79638248 - ALR/Alpha Satellite centromeric -1 2532 328 2816 10 0 0 chr18 6350686 6350993 -79637941 - AluY SINE Alu -4 307 1 1160 167 8 6 chr18 6350993 6351322 -79637612 - ALR/Alpha Satellite centromeric -2205 328 1 1042 172 8 4 chr18 6351443 6356468 -79632466 + ALR/Alpha Satellite centromeric 1 5044 -48 1144 168 5 4 chr18 6356497 6360615 -79628319 + ALR/Alpha Satellite centromeric 1 4114 -4528 2706 23 7 0 chr18 6360615 6360924 -79628010 - AluYb8 SINE Alu -7 311 1 1144 168 5 4 chr18 6360924 6365121 -79623813 + ALR/Alpha Satellite centromeric 4114 8631 -11 1182 154 4 2 chr18 6365136 6374104 -79614830 + ALR/Alpha Satellite centromeric 1 8981 0 1074 171 5 4 chr18 6374115 6378212 -79610722 + ALR/Alpha Satellite centromeric 1 4098 -8 6505 125 4 3 chr18 6378212 6379180 -79609754 - LTR5 LTR ERVK 0 969 1 1227 171 4 2 chr18 6379192 6396696 -79592238 + ALR/Alpha Satellite centromeric 1 17532 -48 1047 173 4 3 chr18 6396725 6401823 -79587111 + ALR/Alpha Satellite centromeric 1 5100 -65 35663 68 3 6 chr18 6401824 6406537 -79582397 + L1PA3 LINE L1 1 4701 -1445 7174 35 22 1 chr18 6406541 6407741 -79581193 + L1PA3 LINE L1 4935 6152 -3 1083 171 5 2 chr18 6407741 6415613 -79573321 + ALR/Alpha Satellite centromeric 1 7895 -8 1066 182 3 2 chr18 6415624 6417334 -79571600 + ALR/Alpha Satellite centromeric 1 1712 0 372 22 0 0 chr18 6417340 6417385 -79571549 + (TTA)n Simple_repeat Simple_repeat 1 45 0 7072 44 8 1 chr18 6417388 6418722 -79570212 - L1PA3 LINE L1 -20 6135 4797 5069 47 0 0 chr18 6418722 6419360 -79569574 + L1PA3 LINE L1 4142 4779 -1367 1059 166 8 5 chr18 6419360 6425076 -79563858 + ALR/Alpha Satellite centromeric 1 6053 -1646 2883 13 0 0 chr18 6425076 6425391 -79563543 - AluYb8 SINE Alu -3 315 1 1059 166 8 5 chr18 6425391 6427036 -79561898 + ALR/Alpha Satellite centromeric 6053 7693 -6 41404 60 6 5 chr18 6427040 6433184 -79555750 + L1PA4 LINE L1 1 6152 -3 1028 172 7 1 chr18 6433186 6434873 -79554061 + ALR/Alpha Satellite centromeric 1 1696 -32 1147 173 6 3 chr18 6434916 6449183 -79539751 + ALR/Alpha Satellite centromeric 1 14648 -4344 2034 147 0 0 chr18 6449183 6449482 -79539452 - AluY SINE Alu -12 299 1 1147 173 6 3 chr18 6449482 6453842 -79535092 + ALR/Alpha Satellite centromeric 14648 18991 -1 6287 66 31 49 chr18 6453847 6454819 -79534115 - SVA Other Other 0 1386 433 908 109 15 30 chr18 6454832 6455034 -79533900 - SVA Other Other -592 794 596 1157 158 8 2 chr18 6455144 6461227 -79527707 + ALR/Alpha Satellite centromeric 1 6115 -3 997 162 3 2 chr18 6461238 6462173 -79526761 + ALR/Alpha Satellite centromeric 1 935 -2 1066 166 8 3 chr18 6462185 6463634 -79525300 + ALR/Alpha Satellite centromeric 1 1456 -3 1214 154 4 9 chr18 6463645 6466745 -79522189 + ALR/Alpha Satellite centromeric 1 3086 0 1245 154 6 1 chr18 6466756 6469138 -79519796 + ALR/Alpha Satellite centromeric 1 2392 0 1162 156 7 5 chr18 6469149 6470067 -79518867 + ALR/Alpha Satellite centromeric 1 916 -4278 2263 110 0 0 chr18 6470067 6470359 -79518575 - AluY SINE Alu -19 292 1 1162 156 7 5 chr18 6470359 6474301 -79514633 + ALR/Alpha Satellite centromeric 916 5163 -31 1082 163 0 0 chr18 6474305 6474471 -79514463 + AluY SINE Alu 3 168 -143 1153 143 3 1 chr18 6474476 6475651 -79513283 + ALR/Alpha Satellite centromeric 1 1176 -1 1009 151 4 6 chr18 6475664 6476141 -79512793 + ALR/Alpha Satellite centromeric 1 476 -27 3613 28 21 0 chr18 6476143 6476576 -79512358 - L1PA4 LINE L1 -341 5814 5373 2452 84 3 0 chr18 6476576 6476888 -79512046 + L1PA4 LINE L1 5819 6152 -3 1263 152 6 2 chr18 6476893 6489216 -79499718 + ALR/Alpha Satellite centromeric 1 12365 -4 1187 147 4 3 chr18 6489340 6491691 -79497243 - ALR/Alpha Satellite centromeric -2 2354 1 687 180 3 2 chr18 6491803 6492191 -79496743 + HSAT4 Satellite centromeric 1 388 -25 1146 215 48 5 chr18 6492337 6494406 -79494528 - GSATX Satellite centromeric -4 2157 1 1187 167 5 8 chr18 6494517 6497179 -79491755 + ALR/Alpha Satellite centromeric 1 2654 -58 1126 157 3 0 chr18 6497279 6499626 -79489308 - ALR/Alpha Satellite centromeric 0 2354 1 1300 203 4 4 chr18 6499726 6501172 -79487762 + GSATX Satellite centromeric 1 1446 0 1036 232 4 6 chr18 6501183 6503500 -79485434 + GSATX Satellite centromeric 1 2311 -68 1218 154 8 0 chr18 6503607 6507906 -79481028 + ALR/Alpha Satellite centromeric 1 4334 -31 866 157 40 3 chr18 6508009 6508231 -79480703 - ALR/Alpha Satellite centromeric 0 230 1 1160 181 10 2 chr18 6508246 6512192 -79476742 - ALR/Alpha Satellite centromeric -2 3977 1 1114 204 37 3 chr18 6512187 6512684 -79476250 - GSATX Satellite centromeric 0 514 1 * 1224 157 4 8 chr18 6512787 6512828 -79476106 - ALR/Alpha Satellite centromeric 0 12168 12128 12183 53 1 2 chr18 6512828 6515108 -79473826 - L1PA4 LINE L1 -1 6154 3875 1224 157 4 8 chr18 6515108 6525006 -79463928 - ALR/Alpha Satellite centromeric -40 12128 1 1156 169 7 4 chr18 6525018 6530180 -79458754 - ALR/Alpha Satellite centromeric 0 7215 1734 2851 7 0 0 chr18 6530180 6530480 -79458454 - AluYa5 SINE Alu -11 300 1 1156 169 7 4 chr18 6530480 6532218 -79456716 - ALR/Alpha Satellite centromeric -5481 1734 1 1491 138 0 9 chr18 6532218 6532442 -79456492 + L1P LINE L1 5 226 -5920 1222 207 4 5 chr18 6532543 6534017 -79454917 - GSATX Satellite centromeric 0 1472 1 1413 188 9 9 chr18 6534028 6537008 -79451926 - GSATX Satellite centromeric 0 2980 1 1071 159 2 2 chr18 6537111 6538770 -79450164 + ALR/Alpha Satellite centromeric 1 1658 -13 3592 103 0 0 chr18 6538772 6539240 -79449694 - L1P LINE L1 -5672 474 7 * 22796 55 2 1 chr18 6539238 6543714 -79445220 + L1PA4 LINE L1 1588 6074 -81 1197 222 18 5 chr18 6543858 6545453 -79443481 + GSATX Satellite centromeric 1 1616 -27 997 195 4 0 chr18 6545497 6545736 -79443198 + GSATX Satellite centromeric 1 239 -28 1225 208 14 4 chr18 6545781 6547288 -79441646 + GSATX Satellite centromeric 1 1520 -36 1149 219 14 5 chr18 6547299 6552714 -79436220 + GSATX Satellite centromeric 1 5459 -36 773 239 6 3 chr18 6552762 6553001 -79435933 + GSATX Satellite centromeric 1 239 -11 1360 189 23 8 chr18 6553085 6559285 -79429649 + GSATX Satellite centromeric 1 6295 -9 1176 177 9 4 chr18 6559385 6566436 -79422498 - ALR/Alpha Satellite centromeric -1 7087 1 1091 184 7 7 chr18 6566447 6570707 -79418227 - ALR/Alpha Satellite centromeric 0 4259 1 977 184 10 10 chr18 6570718 6571820 -79417114 - ALR/Alpha Satellite centromeric 0 1101 1 1055 179 10 3 chr18 6571833 6575405 -79413529 - ALR/Alpha Satellite centromeric 0 3597 1 1125 160 12 0 chr18 6575505 6577563 -79411371 - ALR/Alpha Satellite centromeric 0 2082 1 1164 151 0 0 chr18 6577574 6578036 -79410898 - ALR/Alpha Satellite centromeric 0 462 1 7224 69 0 0 chr18 6578037 6578934 -79410000 + MER11D LTR ERVK 1 897 0 1238 148 9 2 chr18 6578934 6589755 -79399179 + ALR/Alpha Satellite centromeric 1 10904 -56 1241 145 4 3 chr18 6589859 6611503 -79377431 + ALR/Alpha Satellite centromeric 1 21664 0 1212 149 5 2 chr18 6611514 6618898 -79370036 - ALR/Alpha Satellite centromeric 0 7403 1 1169 147 4 2 chr18 6618998 6621469 -79367465 - ALR/Alpha Satellite centromeric 0 2475 1 563 64 0 0 chr18 6621563 6621641 -79367293 - L1PA4 LINE L1 -3 6152 6075 1224 146 5 3 chr18 6621745 6631533 -79357401 - ALR/Alpha Satellite centromeric -1 9815 1 1270 146 6 2 chr18 6631547 6650340 -79338594 - ALR/Alpha Satellite centromeric 0 18874 1 1231 145 4 2 chr18 6650352 6666649 -79322285 - ALR/Alpha Satellite centromeric 0 16321 1 611 212 6 0 chr18 6666749 6667588 -79321346 - HSAT4 Satellite centromeric -5 844 1 2274 110 3 0 chr18 6667588 6667889 -79321045 - AluSp SINE Alu -11 302 1 703 206 5 4 chr18 6667892 6669964 -79318970 - HSAT4 Satellite centromeric 0 6858 4790 2118 124 3 0 chr18 6669964 6670255 -79318679 - AluSp SINE Alu -19 294 3 703 206 5 4 chr18 6670255 6674741 -79314193 - HSAT4 Satellite centromeric -2068 4790 1 194 0 0 37 chr18 6674741 6674768 -79314166 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2244 103 3 0 chr18 6674771 6675061 -79313873 - AluSc SINE Alu -17 292 2 658 225 5 0 chr18 6675064 6677164 -79311770 - HSAT4 Satellite centromeric -2 2110 1 653 196 7 1 chr18 6677185 6678839 -79310095 - HSAT4 Satellite centromeric -2 1662 1 685 213 7 3 chr18 6678871 6688327 -79300607 - HSAT4 Satellite centromeric -2 9493 1 781 245 84 4 chr18 6688338 6690489 -79298445 - GSATX Satellite centromeric -4 2324 1 250 231 0 39 chr18 6690565 6690643 -79298291 - GSATII Satellite centromeric -34 182 108 * 270 242 0 0 chr18 6690578 6690644 -79298290 - GSATX Satellite centromeric -46 172 107 763 252 81 3 chr18 6690656 6692926 -79296008 + GSATX Satellite centromeric 1 2448 -66 652 266 65 0 chr18 6692968 6693846 -79295088 + GSATX Satellite centromeric 1 934 0 404 338 6 0 chr18 6693879 6694039 -79294895 + GSATX Satellite centromeric 58 218 0 656 244 66 4 chr18 6694077 6695378 -79293556 + GSATX Satellite centromeric 1 1381 -2 762 215 81 0 chr18 6695415 6696580 -79292354 + GSATX Satellite centromeric 1 1258 -68 892 226 55 8 chr18 6696612 6700000 -79288934 + GSATX Satellite centromeric 1 3548 0 2184 122 0 0 chr18 6800445 6800733 -79188201 - AluSg SINE Alu -22 288 1 198 0 0 0 chr18 6800733 6800755 -79188179 + (T)n Simple_repeat Simple_repeat 1 22 0 27 73 0 0 chr18 6801537 6801592 -79187342 + GC_rich Low_complexity Low_complexity 1 55 0 189 0 0 0 chr18 6802111 6802132 -79186802 + (GA)n Simple_repeat Simple_repeat 2 22 0 286 250 78 9 chr18 6803074 6803190 -79185744 - LTR67 LTR ERVL -22 535 412 1539 216 139 11 chr18 6803797 6804237 -79184697 + MLT1D LTR MaLR 10 505 0 2162 111 17 0 chr18 6804383 6804681 -79184253 - AluSx SINE Alu -9 303 1 30 51 0 0 chr18 6806042 6806081 -79182853 + GC_rich Low_complexity Low_complexity 1 39 0 1213 80 15 0 chr18 6806403 6806603 -79182331 - L1P5 LINE L1 -670 5481 5279 3015 138 8 11 chr18 6806603 6807126 -79181808 + L1PB1 LINE L1 5631 6151 0 436 245 65 49 chr18 6807365 6807549 -79181385 + L1ME LINE L1 5523 5709 -461 253 179 71 0 chr18 6807580 6807636 -79181298 + L1ME LINE L1 5810 5869 -301 706 258 30 30 chr18 6807795 6808028 -79180906 + LTR16A LTR ERVL 209 441 -9 417 255 99 7 chr18 6808331 6808472 -79180462 - MLT1H1 LTR MaLR -2 553 400 694 343 93 38 chr18 6809261 6809864 -79179070 + L2 LINE L2 2186 2821 -493 1357 141 0 12 chr18 6810658 6810899 -79178035 - L1MA6 LINE L1 -4 6296 6059 26 0 0 0 chr18 6812290 6812316 -79176618 + AT_rich Low_complexity Low_complexity 1 26 0 330 264 98 45 chr18 6813214 6813460 -79175474 + MIR SINE MIR 4 262 0 2112 139 47 40 chr18 6814807 6815002 -79173932 + MSTA LTR MaLR 1 193 -235 2124 124 0 3 chr18 6815002 6815292 -79173642 + AluSx SINE Alu 1 289 -23 2112 139 47 40 chr18 6815292 6815521 -79173413 + MSTA LTR MaLR 193 428 0 292 298 0 73 chr18 6816205 6816390 -79172544 + L1ME LINE L1 5429 5601 -569 447 267 108 11 chr18 6817326 6817502 -79171432 + MLT1J1 LTR MaLR 1 193 -253 544 309 69 5 chr18 6817706 6817894 -79171040 - MIR SINE MIR -44 218 19 321 272 0 11 chr18 6818324 6818416 -79170518 + (TA)n Simple_repeat Simple_repeat 1 91 0 1828 234 63 15 chr18 6818427 6819626 -79169308 - L1ME3 LINE L1 -81 6081 4800 1426 77 6 0 chr18 6819626 6819807 -79169127 - AluSp SINE Alu -6 307 126 198 0 0 0 chr18 6819807 6819829 -79169105 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2322 60 0 0 chr18 6819829 6820111 -79168823 - AluY SINE Alu -29 282 1 1740 252 101 20 chr18 6820121 6820872 -79168062 - L1ME3 LINE L1 -1353 4793 3982 1280 138 0 23 chr18 6820872 6821089 -79167845 - L1PA16 LINE L1 0 6166 5955 355 273 16 50 chr18 6821288 6821409 -79167525 + L2 LINE L2 3197 3313 0 205 406 26 45 chr18 6821498 6821653 -79167281 - L2 LINE L2 -9 3263 3112 25 0 0 0 chr18 6823333 6823358 -79165576 + AT_rich Low_complexity Low_complexity 1 25 0 526 342 106 33 chr18 6825969 6826270 -79162664 + L2 LINE L2 2950 3272 0 245 338 105 8 chr18 6827650 6827783 -79161151 - L2 LINE L2 -223 3049 2904 22 0 0 0 chr18 6828191 6828213 -79160721 + AT_rich Low_complexity Low_complexity 1 22 0 828 263 98 23 chr18 6828495 6829107 -79159827 - L1ME3 LINE L1 -336 5826 5165 261 0 0 0 chr18 6829355 6829384 -79159550 + (CTG)n Simple_repeat Simple_repeat 2 30 0 229 312 54 21 chr18 6829934 6830027 -79158907 + L2 LINE L2 2995 3090 -182 2691 19 0 0 chr18 6830215 6830526 -79158408 + L1PA2 LINE L1 5844 6154 -1 474 295 57 57 chr18 6830842 6831052 -79157882 + MIR SINE MIR 43 252 -10 436 269 42 92 chr18 6832373 6832633 -79156301 + L1ME3 LINE L1 5702 5947 -215 316 257 22 73 chr18 6832972 6833108 -79155826 + MIR3 SINE MIR 53 181 -27 438 36 0 0 chr18 6833118 6833174 -79155760 + (TG)n Simple_repeat Simple_repeat 1 56 0 245 152 0 0 chr18 6833212 6833258 -79155676 - L1MA9 LINE L1 -6 6306 6261 1092 160 150 11 chr18 6835122 6835221 -79153713 - L1MA9 LINE L1 -33 6279 6195 402 21 0 0 chr18 6835221 6835268 -79153666 + (TG)n Simple_repeat Simple_repeat 1 47 0 1092 160 150 11 chr18 6835268 6835459 -79153475 - L1MA9 LINE L1 -117 6195 5964 333 256 74 91 chr18 6835794 6835970 -79152964 + MIR3 SINE MIR 30 202 -6 187 130 241 19 chr18 6836196 6836250 -79152684 - L2 LINE L2 -55 3258 3193 255 267 44 0 chr18 6836878 6836968 -79151966 + MLT1G LTR MaLR 474 567 -23 188 321 109 64 chr18 6837573 6837993 -79150941 - L2 LINE L2 -457 2857 2419 996 178 16 5 chr18 6838956 6839141 -79149793 - MER5A DNA MER1_type 0 189 3 423 333 24 12 chr18 6839151 6839316 -79149618 - MER5B DNA MER1_type -4 174 8 1729 171 75 3 chr18 6839992 6840313 -79148621 + MER2 DNA MER2_type 1 344 0 1005 50 0 0 chr18 6840980 6841099 -79147835 + AluY SINE Alu 191 309 -2 208 308 33 22 chr18 6841492 6841583 -79147351 - MIR3 SINE MIR -11 197 106 1703 183 3 29 chr18 6842165 6842476 -79146458 + AluJo SINE Alu 2 304 -8 2469 74 0 7 chr18 6842477 6842786 -79146148 + AluY SINE Alu 1 307 -4 2130 119 0 26 chr18 6844629 6844939 -79143995 - AluSg SINE Alu -8 302 1 203 308 115 29 chr18 6844940 6845044 -79143890 + MIR SINE MIR 150 262 0 522 238 12 108 chr18 6845388 6845628 -79143306 + L2 LINE L2 3097 3313 0 213 108 0 0 chr18 6846927 6846964 -79141970 + (A)n Simple_repeat Simple_repeat 1 37 0 1609 149 17 60 chr18 6847484 6847786 -79141148 - AluJo SINE Alu -23 289 1 346 311 19 0 chr18 6847879 6847982 -79140952 - MER5C DNA MER1_type -200 124 20 541 283 28 0 chr18 6848607 6848784 -79140150 + L2 LINE L2 1127 1308 -2006 1417 260 45 24 chr18 6849197 6849275 -79139659 + L1ME1 LINE L1 1359 1434 -4753 2325 109 7 0 chr18 6849275 6849579 -79139355 + AluSx SINE Alu 1 306 -6 1417 260 45 24 chr18 6849579 6850223 -79138711 + L1ME1 LINE L1 1434 5444 -743 36267 32 0 0 chr18 6850241 6855420 -79133514 - L1PA2 LINE L1 -2 6153 975 6003 51 4 10 chr18 6855425 6856273 -79132661 + L1PA2 LINE L1 3 974 -5172 1798 278 79 11 chr18 6856263 6856921 -79132013 + L1ME1 LINE L1 5446 6148 -18 * 255 114 0 0 chr18 6857108 6857152 -79131782 + (GA)n Simple_repeat Simple_repeat 1 44 0 241 302 11 88 chr18 6857192 6857280 -79131654 + HAL1 LINE L1 1578 1646 -861 1955 122 30 14 chr18 6857280 6857576 -79131358 - AluSq SINE Alu -7 306 6 241 302 11 88 chr18 6857576 6857669 -79131265 + HAL1 LINE L1 1646 1745 -762 229 236 9 66 chr18 6858226 6858332 -79130602 + HAL1b LINE L1 748 847 -501 1997 128 0 24 chr18 6858369 6858665 -79130269 + AluSg SINE Alu 1 289 -21 337 289 105 26 chr18 6858865 6859055 -79129879 + HAL1 LINE L1 2301 2505 -2 872 316 122 53 chr18 6860004 6860797 -79128137 + L3 LINE CR1 382 1229 -348 186 361 115 0 chr18 6861688 6861818 -79127116 + L2 LINE L2 2358 2502 -812 180 333 74 43 chr18 6862901 6863063 -79125871 - L2 LINE L2 -862 2452 2286 23 33 0 0 chr18 6863712 6863742 -79125192 + AT_rich Low_complexity Low_complexity 1 30 0 30 45 0 0 chr18 6864868 6864912 -79124022 + AT_rich Low_complexity Low_complexity 1 44 0 4333 180 27 27 chr18 6865366 6866540 -79122394 + L1MB7 LINE L1 4995 6165 -19 334 246 249 48 chr18 6866909 6867111 -79121823 - L1ME4a LINE L1 -201 5920 5760 258 81 0 0 chr18 6867111 6867148 -79121786 + (TA)n Simple_repeat Simple_repeat 2 38 0 334 246 249 48 chr18 6867148 6867238 -79121696 - L1ME4a LINE L1 -361 5760 5569 559 286 147 37 chr18 6867648 6868068 -79120866 + MLT1F LTR MaLR 94 527 -15 243 0 0 0 chr18 6868242 6868269 -79120665 + (ATTG)n Simple_repeat Simple_repeat 2 28 0 2065 120 0 0 chr18 6868269 6868553 -79120381 - AluSx SINE Alu -28 284 1 280 340 103 32 chr18 6868588 6868744 -79120190 - L3 LINE CR1 -96 1481 1315 206 257 71 53 chr18 6869594 6869707 -79119227 - MER5A DNA MER1_type -68 121 7 9574 191 67 42 chr18 6869977 6870415 -79118519 - L1MC3 LINE L1 0 7785 7359 2020 100 97 29 chr18 6870415 6870756 -79118178 + THE1B LTR MaLR 1 364 0 9574 191 67 42 chr18 6870756 6872600 -79116334 - L1MC3 LINE L1 -426 7359 5440 1884 122 78 0 chr18 6872600 6872871 -79116063 - AluSx SINE Alu -20 292 1 9574 191 67 42 chr18 6872871 6872937 -79115997 - L1MC3 LINE L1 -2345 5440 5377 337 182 34 0 chr18 6873610 6873698 -79115236 + MER113 DNA MER1_type? 129 219 -302 661 300 133 33 chr18 6874344 6874644 -79114290 + MLT1I LTR MaLR 80 409 0 22 35 0 0 chr18 6875312 6875341 -79113593 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr18 6875966 6875989 -79112945 + AT_rich Low_complexity Low_complexity 1 23 0 2298 92 0 0 chr18 6876184 6876487 -79112447 + AluY SINE Alu 1 303 -8 625 272 98 13 chr18 6876605 6876840 -79112094 - MLT1H1 LTR MaLR -11 544 290 33 0 0 0 chr18 6877471 6877504 -79111430 + AT_rich Low_complexity Low_complexity 1 33 0 516 274 70 117 chr18 6878296 6878882 -79110052 - MLT1H1 LTR MaLR 0 555 1 228 328 0 0 chr18 6878920 6878987 -79109947 + MER113 DNA MER1_type? 455 521 0 23 33 0 0 chr18 6879321 6879351 -79109583 + AT_rich Low_complexity Low_complexity 1 30 0 612 331 33 4 chr18 6879697 6879943 -79108991 + L1M2b LINE L1 1401 1669 -5540 283 223 157 58 chr18 6880051 6880172 -79108762 - MLT1H1 LTR MaLR 0 555 423 6160 208 39 14 chr18 6880225 6881777 -79107157 + L1M2b LINE L1 1710 3318 -3890 1890 145 151 5 chr18 6881777 6882149 -79106785 - MSTA LTR MaLR 0 428 3 6160 208 39 14 chr18 6882149 6882487 -79106447 + L1M2b LINE L1 3318 3646 -3562 1962 132 35 59 chr18 6882492 6882833 -79106101 + MER1B DNA MER1_type 7 339 0 7864 208 16 33 chr18 6882834 6883905 -79105029 + L1M2b LINE L1 3640 4664 -2544 637 242 8 0 chr18 6883905 6884037 -79104897 - FLAM_A SINE Alu 0 133 1 7864 208 16 33 chr18 6884037 6884960 -79103974 + L1M2b LINE L1 4664 5601 -1607 2077 95 0 18 chr18 6885407 6885730 -79103204 - AluSc SINE Alu 0 318 1 848 238 12 28 chr18 6885847 6886099 -79102835 - L1M4 LINE L1 -984 6581 6334 371 205 0 0 chr18 6886291 6886369 -79102565 - L1MC/D LINE L1 -2335 5473 5396 309 245 11 43 chr18 6886374 6886468 -79102466 + L1MC4 LINE L1 6613 6703 -1339 240 141 109 0 chr18 6886490 6886554 -79102380 - L1MC/D LINE L1 -2441 5367 5297 309 344 42 24 chr18 6886602 6886814 -79102120 - L1MC/D LINE L1 -988 5158 4943 23 0 0 0 chr18 6887568 6887591 -79101343 + GC_rich Low_complexity Low_complexity 1 23 0 2095 109 0 0 chr18 6887757 6888073 -79100861 + AluSq SINE Alu 1 316 0 188 107 36 36 chr18 6888544 6888600 -79100334 + (GTGTG)n Simple_repeat Simple_repeat 3 58 0 11918 171 21 18 chr18 6888700 6888881 -79100053 - L1M4 LINE L1 -1410 6155 5976 2343 91 3 3 chr18 6888881 6889188 -79099746 - AluY SINE Alu -4 307 1 11918 171 21 18 chr18 6889188 6889978 -79098956 - L1M4 LINE L1 -1589 5976 5190 4701 63 0 2 chr18 6889978 6890564 -79098370 - LTR14C LTR ERVK 0 587 3 11918 171 21 18 chr18 6890564 6892771 -79096163 - L1M4 LINE L1 -2375 5190 2990 1861 186 0 3 chr18 6892771 6893083 -79095851 - AluSq SINE Alu -2 311 1 11918 171 21 18 chr18 6893083 6894175 -79094759 - L1M4 LINE L1 -4575 2990 1902 2365 148 3 3 chr18 6894175 6894539 -79094395 - THE1B LTR MaLR 0 364 1 9717 112 38 40 chr18 6894539 6896122 -79092812 - THE1B-int LTR MaLR 0 1580 1 2527 101 17 0 chr18 6896122 6896480 -79092454 - THE1B LTR MaLR 0 364 1 11918 171 21 18 chr18 6896480 6897871 -79091063 - L1M4 LINE L1 -5662 1903 477 1406 283 47 18 chr18 6898161 6898613 -79090321 - MLT1E LTR MaLR -1 592 128 30 27 0 0 chr18 6898776 6898813 -79090121 + AT_rich Low_complexity Low_complexity 1 37 0 180 0 0 0 chr18 6899825 6899845 -79089089 + (T)n Simple_repeat Simple_repeat 1 20 0 321 280 57 110 chr18 6900474 6900698 -79088236 + L1ME3A LINE L1 546 748 -5322 3089 92 12 2 chr18 6900698 6901121 -79087813 + MSTA LTR MaLR 2 428 0 321 280 57 110 chr18 6901121 6901232 -79087702 + L1ME3A LINE L1 748 863 -5207 680 312 63 42 chr18 6901243 6901986 -79086948 + L1ME3A LINE L1 927 1685 -4576 386 275 90 7 chr18 6902085 6902484 -79086450 + L1ME3A LINE L1 4946 5372 -724 408 292 53 36 chr18 6902550 6902792 -79086142 + L1ME3A LINE L1 5849 6104 0 1878 116 8 4 chr18 6902988 6903256 -79085678 + AluSg SINE Alu 29 297 -13 337 293 114 31 chr18 6903295 6903585 -79085349 - HAL1b LINE L1 -537 811 498 21 36 0 0 chr18 6904311 6904339 -79084595 + AT_rich Low_complexity Low_complexity 1 28 0 799 293 34 42 chr18 6904397 6904776 -79084158 - HERV16 LTR ERVL -2257 2739 2364 209 254 55 0 chr18 6904918 6904973 -79083961 + MIR SINE MIR 185 242 -20 478 289 162 5 chr18 6905926 6906130 -79082804 - MIR SINE MIR -22 240 5 1335 192 15 4 chr18 6906559 6906820 -79082114 + Tigger7 DNA MER2_type 4 267 -2220 3046 176 51 16 chr18 6906839 6907463 -79081471 + MER6 DNA MER2_type 1 646 -219 555 244 0 8 chr18 6907483 6907606 -79081328 - AluJo SINE Alu -71 241 120 1405 100 13 35 chr18 6907606 6907836 -79081098 + MER6 DNA MER2_type 641 865 0 376 226 36 24 chr18 6907836 6907918 -79081016 + Tigger7 DNA MER2_type 2505 2587 0 556 263 26 57 chr18 6908236 6908464 -79080470 + L2 LINE L2 3093 3313 0 520 331 67 21 chr18 6909893 6910313 -79078621 + HAL1 LINE L1 1327 1765 -742 2124 95 3 44 chr18 6910753 6911068 -79077866 - AluSg SINE Alu -8 302 1 323 352 39 30 chr18 6911158 6911388 -79077546 + L1MC/D LINE L1 5040 5271 -875 1207 52 7 0 chr18 6913090 6913244 -79075690 - AluY SINE Alu -1 310 156 274 268 119 6 chr18 6913479 6913675 -79075259 - L1PA8A LINE L1 -669 5506 5294 27 49 0 0 chr18 6914043 6914084 -79074850 + AT_rich Low_complexity Low_complexity 1 41 0 966 258 42 146 chr18 6914117 6914877 -79074057 + MER77 LTR ERV1 24 569 -36 228 233 0 50 chr18 6914904 6914964 -79073970 - L1MD2 LINE L1 -55 6304 6248 3145 237 73 40 chr18 6914971 6915823 -79073111 - L1MD2 LINE L1 -169 6190 5368 1900 146 0 55 chr18 6915823 6916152 -79072782 - AluJb SINE Alu -1 311 1 3145 237 73 40 chr18 6916152 6917990 -79070944 - L1MD2 LINE L1 -991 5368 3371 2038 99 42 7 chr18 6918406 6918689 -79070245 + AluSp SINE Alu 1 293 -20 31 44 0 0 chr18 6918961 6919006 -79069928 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr18 6919062 6919083 -79069851 + AT_rich Low_complexity Low_complexity 1 21 0 367 287 105 53 chr18 6919250 6919459 -79069475 + L2 LINE L2 3000 3219 -94 444 254 51 0 chr18 6919704 6919822 -79069112 - FLAM_A SINE Alu -6 136 13 23 78 0 0 chr18 6920404 6920455 -79068479 + AT_rich Low_complexity Low_complexity 1 51 0 332 330 59 17 chr18 6920498 6920734 -79068200 + L1MC/D LINE L1 5340 5585 -2223 868 227 30 10 chr18 6921331 6921547 -79067387 - MLT1A2 LTR MaLR 0 410 193 267 253 10 81 chr18 6921697 6921796 -79067138 + MLT1H1 LTR MaLR 263 354 -195 350 193 168 25 chr18 6921842 6921961 -79066973 + MLT1H1 LTR MaLR 414 549 -6 4448 127 9 9 chr18 6922287 6922324 -79066610 + L1P LINE L1 2521 2557 -3589 6823 79 6 0 chr18 6922324 6923258 -79065676 - L1PA8 LINE L1 0 6172 5236 4448 127 9 9 chr18 6923258 6923959 -79064975 + L1P LINE L1 2556 3259 -2887 2392 174 16 27 chr18 6924362 6924850 -79064084 - L1PB4 LINE L1 -2 6154 5672 195 280 27 13 chr18 6924971 6925046 -79063888 + MIR3 SINE MIR 132 207 -1 21 57 0 0 chr18 6925382 6925417 -79063517 + AT_rich Low_complexity Low_complexity 1 35 0 585 291 102 34 chr18 6928219 6928751 -79060183 + L1M4 LINE L1 4106 4673 -1473 236 278 112 47 chr18 6928828 6928997 -79059937 + L1MEc LINE L1 1576 1755 -4641 3598 205 36 31 chr18 6929020 6930113 -79058821 + L1MB7 LINE L1 4442 5541 -633 2278 178 8 15 chr18 6930141 6930612 -79058322 + L1MB7 LINE L1 5698 6165 -19 1592 180 58 26 chr18 6930764 6931108 -79057826 + MLT1A2 LTR MaLR 1 355 -19 * 1632 203 19 32 chr18 6931083 6931453 -79057481 - MLT1A2 LTR MaLR -6 368 4 233 234 31 31 chr18 6931453 6931495 -79057439 + MLT1A1 LTR MaLR 313 354 -11 2482 64 0 0 chr18 6931657 6931954 -79056980 + AluY SINE Alu 1 297 -14 361 370 42 2 chr18 6932159 6932337 -79056597 + MLT1G1 LTR MaLR 5 165 -430 777 176 7 0 chr18 6932367 6932503 -79056431 - L1PB4 LINE L1 -18 6138 6002 2204 145 3 17 chr18 6934055 6934407 -79054527 + MER7A DNA MER2_type 2 346 0 260 319 43 21 chr18 6934638 6934732 -79054202 - MIR3 SINE MIR -21 187 92 434 290 92 60 chr18 6935302 6935519 -79053415 - MIR SINE MIR -7 255 32 185 91 0 30 chr18 6935789 6935822 -79053112 + (TTTC)n Simple_repeat Simple_repeat 1 32 0 204 40 0 0 chr18 6935827 6935852 -79053082 + (TA)n Simple_repeat Simple_repeat 2 26 0 1107 280 51 23 chr18 6936381 6936919 -79052015 + L2 LINE L2 2667 3225 -88 512 259 36 57 chr18 6937461 6937654 -79051280 - MIR SINE MIR -4 258 70 673 115 0 0 chr18 6939870 6939966 -79048968 + MLT1B LTR MaLR 295 390 0 1831 96 18 105 chr18 6940228 6940571 -79048363 + AluSq SINE Alu 1 313 0 180 0 0 0 chr18 6940576 6940596 -79048338 + (TAAAAA)n Simple_repeat Simple_repeat 4 23 0 468 172 43 11 chr18 6940799 6940892 -79048042 - MER3 DNA MER1_type -2 207 112 1844 83 0 12 chr18 6940939 6941191 -79047743 - L1M1 LINE L1 -527 5775 5527 611 242 8 0 chr18 6941193 6941321 -79047613 - MER3 DNA MER1_type -79 130 2 277 323 16 47 chr18 6942002 6942129 -79046805 - L2 LINE L2 -1594 1720 1598 1362 292 96 33 chr18 6942843 6943628 -79045306 + L1MC4 LINE L1 7079 7912 -130 227 196 71 80 chr18 6943685 6943797 -79045137 + L1MC4 LINE L1 7918 8028 -14 25 0 0 0 chr18 6944715 6944740 -79044194 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr18 6944803 6944824 -79044110 + AT_rich Low_complexity Low_complexity 1 21 0 225 178 0 0 chr18 6945546 6945591 -79043343 + (CATA)n Simple_repeat Simple_repeat 2 46 0 371 315 54 27 chr18 6947034 6947183 -79041751 - L2 LINE L2 -2 3311 3159 248 378 122 20 chr18 6947304 6947558 -79041376 - L2 LINE L2 -337 2977 2698 2275 216 15 11 chr18 6947566 6948099 -79040835 + L1MC1 LINE L1 3444 3978 -2168 626 104 10 10 chr18 6948102 6948198 -79040736 + MER4A LTR ERV1 3 98 -566 1705 139 11 75 chr18 6948198 6948565 -79040369 + MER4A LTR ERV1 263 664 0 5682 197 45 22 chr18 6948565 6950240 -79038694 + L1MC1 LINE L1 3976 5722 -611 2090 88 0 7 chr18 6950240 6950546 -79038388 + AluSg1 SINE Alu 1 304 0 5682 197 45 22 chr18 6950546 6951173 -79037761 + L1MC1 LINE L1 5722 6333 0 217 352 136 8 chr18 6951178 6951414 -79037520 - L2 LINE L2 -625 2689 2424 813 190 0 0 chr18 6951541 6951720 -79037214 + (TAG)n Simple_repeat Simple_repeat 1 179 0 428 288 73 46 chr18 6951888 6952107 -79036827 + L3 LINE CR1 1263 1487 -90 262 273 13 26 chr18 6952118 6952195 -79036739 - MER5B DNA MER1_type -3 175 100 21 0 0 0 chr18 6952274 6952295 -79036639 + AT_rich Low_complexity Low_complexity 1 21 0 288 360 32 24 chr18 6952419 6952544 -79036390 + L2 LINE L2 3140 3265 -7 29 28 0 0 chr18 6952962 6952998 -79035936 + AT_rich Low_complexity Low_complexity 1 36 0 2482 65 0 3 chr18 6953361 6953671 -79035263 - AluY SINE Alu -2 309 1 487 343 82 60 chr18 6953681 6953853 -79035081 - L3 LINE CR1 -731 846 679 2180 101 0 3 chr18 6953853 6954150 -79034784 - AluSq SINE Alu -17 296 1 487 343 82 60 chr18 6954150 6954514 -79034420 - L3 LINE CR1 -898 679 298 255 61 0 0 chr18 6954516 6954549 -79034385 + (T)n Simple_repeat Simple_repeat 1 33 0 321 247 86 49 chr18 6954862 6955024 -79033910 + L1PA15-16 LINE L1 387 554 -6295 619 333 75 28 chr18 6955361 6955748 -79033186 + L1PA15-16 LINE L1 1154 1558 -5291 * 4030 235 41 35 chr18 6955739 6957577 -79031357 + L1PBb LINE L1 690 2543 -3660 26 30 0 0 chr18 6958143 6958176 -79030758 + AT_rich Low_complexity Low_complexity 1 33 0 340 344 62 0 chr18 6958419 6958579 -79030355 - L1ME4a LINE L1 -175 5946 5777 212 211 19 0 chr18 6958579 6958631 -79030303 + (TA)n Simple_repeat Simple_repeat 1 53 0 312 272 71 107 chr18 6958646 6958795 -79030139 - L1ME4a LINE L1 -360 5761 5627 2024 140 0 16 chr18 6958795 6959110 -79029824 + AluSx SINE Alu 1 310 -2 312 272 71 107 chr18 6959110 6959269 -79029665 - L1ME4a LINE L1 -494 5627 5464 1181 235 90 59 chr18 6959275 6959765 -79029169 + MLT1D LTR MaLR 1 505 0 272 333 97 53 chr18 6960012 6960333 -79028601 - L2 LINE L2 -931 2383 2049 1798 232 37 37 chr18 6960368 6961446 -79027488 - L1MCc LINE L1 -3403 3538 2384 1213 66 30 12 chr18 6961451 6961617 -79027317 + THE1B LTR MaLR 1 169 -195 477 151 0 0 chr18 6961619 6961692 -79027242 + THE1B LTR MaLR 292 364 0 1834 255 47 49 chr18 6961753 6963037 -79025897 - L1MCc LINE L1 -4846 2095 807 1404 156 137 35 chr18 6963333 6963768 -79025166 - Charlie1b DNA MER1_type 0 523 40 242 291 13 0 chr18 6963954 6964033 -79024901 - MIR SINE MIR -182 80 1 495 234 62 8 chr18 6965015 6965143 -79023791 - MIR SINE MIR -79 183 49 234 182 0 0 chr18 6965739 6965794 -79023140 + L1MC4 LINE L1 6652 6706 -1336 303 362 24 8 chr18 6965863 6965990 -79022944 - MIR SINE MIR -112 150 22 2086 117 7 7 chr18 6966072 6966371 -79022563 - AluSx SINE Alu -13 299 1 246 301 188 11 chr18 6966621 6966807 -79022127 - MIR SINE MIR -15 247 29 752 267 36 36 chr18 6966919 6967200 -79021734 - L1ME3A LINE L1 -9 6161 5881 365 332 106 9 chr18 6967205 6967422 -79021512 - LTR16A LTR ERVL -6 444 207 1122 336 96 15 chr18 6967838 6968647 -79020287 - HERV16 LTR ERVL -3631 1365 491 4291 141 35 19 chr18 6968844 6969615 -79019319 - L1MC2 LINE L1 -145 6199 5417 1032 160 66 33 chr18 6969974 6970218 -79018716 - L1MA9 LINE L1 -5 6307 6056 1798 106 9 75 chr18 6970523 6970873 -79018061 - AluSx SINE Alu 0 312 1 6246 231 30 21 chr18 6970877 6974377 -79014557 - L1PA13 LINE L1 -3113 3684 1 306 285 51 6 chr18 6974386 6974544 -79014390 - L1MEd LINE L1 -5050 1069 905 310 324 133 48 chr18 6974641 6974740 -79014194 - L1MEd LINE L1 -5351 768 679 2143 138 0 0 chr18 6974740 6975045 -79013889 - AluSx SINE Alu -7 305 1 310 324 133 48 chr18 6975045 6975260 -79013674 - L1MEd LINE L1 -5440 679 427 9803 256 49 31 chr18 6975375 6977743 -79011191 - L1ME1 LINE L1 -285 6379 4057 2433 70 0 0 chr18 6977743 6978045 -79010889 - AluY SINE Alu -9 302 1 9803 256 49 31 chr18 6978045 6978599 -79010335 - L1ME1 LINE L1 -2607 4057 3515 1847 105 260 9 chr18 6978599 6978941 -79009993 - MSTA LTR MaLR 0 428 1 9803 256 49 31 chr18 6978941 6982252 -79006682 - L1ME1 LINE L1 -3149 3515 16 21 0 0 0 chr18 6982788 6982809 -79006125 + AT_rich Low_complexity Low_complexity 1 21 0 301 294 82 82 chr18 6983213 6983458 -79005476 + MIR SINE MIR 3 247 -15 1576 154 135 3 chr18 6983874 6984193 -79004741 - MER46B DNA MER2_type 0 236 1 248 211 0 19 chr18 6984147 6984199 -79004735 + MER46A DNA MER2_type 100 150 -86 * 22 35 0 0 chr18 6984525 6984554 -79004380 + AT_rich Low_complexity Low_complexity 1 29 0 187 225 0 0 chr18 6984734 6984774 -79004160 + L3b LINE CR1 1427 1466 -117 334 290 28 0 chr18 6985270 6985377 -79003557 + (TATATG)n Simple_repeat Simple_repeat 4 113 0 239 303 53 53 chr18 6985959 6986111 -79002823 - MIR SINE MIR 0 262 111 180 0 0 0 chr18 6986357 6986377 -79002557 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 827 148 0 0 chr18 6986383 6986505 -79002429 - FLAM_C SINE Alu -11 122 1 330 26 0 0 chr18 6986885 6986924 -79002010 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 1930 220 91 6 chr18 6987031 6987842 -79001092 - L1M4 LINE L1 -404 5770 4899 1303 131 5 5 chr18 6988595 6988801 -79000133 + AluY SINE Alu 102 307 -4 6870 137 18 1 chr18 6988801 6990529 -78998405 + L1MA2 LINE L1 4554 6302 -2 21 0 0 0 chr18 6990529 6990550 -78998384 + AT_rich Low_complexity Low_complexity 1 21 0 274 276 19 48 chr18 6990917 6991022 -78997912 + MIR SINE MIR 140 241 -21 * 417 289 86 7 chr18 6991012 6991164 -78997770 - MIR SINE MIR -98 164 1 21 0 0 0 chr18 6991561 6991582 -78997352 + AT_rich Low_complexity Low_complexity 1 21 0 231 270 69 31 chr18 6991709 6991868 -78997066 + L1ME4a LINE L1 5957 6121 0 310 302 88 53 chr18 6992720 6993038 -78995896 + L2 LINE L2 1854 2182 -1132 317 270 0 22 chr18 6993185 6993274 -78995660 + MIR SINE MIR 49 135 -127 296 357 36 46 chr18 6994434 6994630 -78994304 + L2 LINE L2 2891 3084 -188 230 323 50 10 chr18 6994747 6994846 -78994088 + L2 LINE L2 3145 3247 -25 537 279 36 89 chr18 6995987 6996239 -78992695 + MIR SINE MIR 16 262 0 1498 251 53 31 chr18 6996369 6996783 -78992151 + MLT2F LTR ERVL 186 608 -55 237 73 24 24 chr18 6996844 6996885 -78992049 + MLT2D LTR ERVL 374 414 0 240 35 0 0 chr18 6997119 6997148 -78991786 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 307 256 51 26 chr18 6998139 6998256 -78990678 - MER112 DNA MER1_type -43 217 98 597 178 142 138 chr18 6998485 6998760 -78990174 - MLT1C LTR MaLR 0 467 192 2556 195 99 39 chr18 6998790 6998863 -78990071 - MLT1C-int LTR MaLR -663 708 641 2411 94 0 0 chr18 6998863 6999172 -78989762 - AluY SINE Alu -2 309 1 2556 195 99 39 chr18 6999172 6999765 -78989169 - MLT1C-int LTR MaLR -730 641 2 913 220 43 123 chr18 6999766 7000188 -78988746 - MLT1C LTR MaLR 0 390 3 180 125 0 0 chr18 7000412 7000444 -78988490 + (AATTG)n Simple_repeat Simple_repeat 3 34 0 185 326 81 0 chr18 7000733 7000819 -78988115 - L2 LINE L2 -13 3300 3208 * 1678 290 106 17 chr18 7000789 7001431 -78987503 - L2 LINE L2 -704 2610 1912 595 324 111 44 chr18 7001465 7002171 -78986763 + L1M4 LINE L1 3187 3939 -2207 462 300 186 22 chr18 7002209 7002622 -78986312 + L1M4 LINE L1 3759 4239 -1907 300 288 89 0 chr18 7002749 7002895 -78986039 + L1M4 LINE L1 4365 4523 -1623 2214 98 0 46 chr18 7003058 7003182 -78985752 + AluSx SINE Alu 1 129 -183 259 44 44 0 chr18 7003182 7003227 -78985707 + (TAA)n Simple_repeat Simple_repeat 2 48 0 2214 98 0 46 chr18 7003227 7003427 -78985507 + AluSx SINE Alu 129 310 -2 851 23 53 40 chr18 7004502 7004802 -78984132 + (CCA)n Simple_repeat Simple_repeat 3 481 0 231 36 0 0 chr18 7004921 7004949 -78983985 + (A)n Simple_repeat Simple_repeat 1 28 0 434 373 76 8 chr18 7005607 7005870 -78983064 + L3 LINE CR1 1294 1574 -3 2112 153 20 77 chr18 7006484 7006993 -78981941 - L1MB8 LINE L1 -6 6172 5693 868 162 28 39 chr18 7006994 7007173 -78981761 - L1MB8 LINE L1 -661 5513 5337 388 369 36 10 chr18 7007178 7007373 -78981561 + L3 LINE CR1 1375 1574 -3 2303 201 20 16 chr18 7007419 7007965 -78980969 - L1M4 LINE L1 -817 5329 4782 2246 107 3 0 chr18 7008093 7008391 -78980543 - AluSp SINE Alu -14 299 1 462 386 33 14 chr18 7008812 7009027 -78979907 - MIR SINE MIR -27 235 17 186 304 18 0 chr18 7009040 7009096 -78979838 - MIR3 SINE MIR -41 167 111 264 299 15 0 chr18 7009121 7009188 -78979746 + MER91B DNA MER1_type 1 68 -122 443 279 49 27 chr18 7009323 7009506 -78979428 - L1MC3 LINE L1 -1557 6228 6042 286 281 35 44 chr18 7009509 7009623 -78979311 + MER81 DNA DNA 2 114 0 709 235 19 28 chr18 7009624 7009916 -78979018 - L1ME1 LINE L1 -122 6324 26 204 97 0 0 chr18 7010917 7010948 -78977986 + (CA)n Simple_repeat Simple_repeat 2 32 0 664 333 45 17 chr18 7011347 7011635 -78977299 + MLT1J LTR MaLR 1 296 -215 243 0 0 0 chr18 7011930 7011957 -78976977 + (TG)n Simple_repeat Simple_repeat 2 28 0 921 245 34 73 chr18 7012045 7012458 -78976476 + MLT2C1 LTR ERVL 1 397 0 543 271 14 0 chr18 7013272 7013412 -78975522 + MER103 DNA DNA 3 144 -22 305 138 0 17 chr18 7014859 7014917 -78974017 + (TTCC)n Simple_repeat Simple_repeat 2 58 0 2128 111 0 0 chr18 7016029 7016317 -78972617 + AluSc SINE Alu 1 288 -21 261 57 0 0 chr18 7016318 7016353 -78972581 + (TA)n Simple_repeat Simple_repeat 2 36 0 2147 135 0 0 chr18 7016459 7016771 -78972163 - AluSx SINE Alu 0 312 1 430 325 25 39 chr18 7017405 7017608 -78971326 - L2 LINE L2 -422 2892 2693 3785 198 28 26 chr18 7018417 7019301 -78969633 + L1MB8 LINE L1 5293 6178 0 1732 135 28 7 chr18 7020396 7020685 -78968249 - L1MA4 LINE L1 -323 5977 5683 1442 130 27 19 chr18 7020679 7020941 -78967993 + L1MA4 LINE L1 5985 6248 -52 * 25 31 0 0 chr18 7020961 7020993 -78967941 + AT_rich Low_complexity Low_complexity 1 32 0 181 236 139 28 chr18 7021763 7021835 -78967099 - L3b LINE CR1 -146 1437 1358 550 320 69 50 chr18 7022502 7022805 -78966129 - MLT1J LTR MaLR -131 380 72 404 225 89 94 chr18 7023040 7023253 -78965681 + HAL1 LINE L1 2296 2507 0 368 267 10 50 chr18 7023651 7023752 -78965182 - L3 LINE CR1 -64 1513 1417 239 309 163 8 chr18 7023820 7023943 -78964991 + L2 LINE L2 2636 2777 -537 297 333 34 17 chr18 7024175 7024292 -78964642 + L2 LINE L2 3171 3289 -24 275 266 73 37 chr18 7024348 7024457 -78964477 - L3 LINE CR1 -262 1315 1203 593 311 90 7 chr18 7024872 7025161 -78963773 - L3 LINE CR1 -670 907 595 13774 143 35 9 chr18 7025232 7027588 -78961346 - Tigger1 DNA MER2_type 0 2418 1 2230 109 0 0 chr18 7027963 7028257 -78960677 - AluSx SINE Alu -18 294 1 7363 38 13 0 chr18 7028634 7030050 -78958884 - L1PA5 LINE L1 -5 6149 4725 263 282 16 65 chr18 7030319 7030443 -78958491 - MIR SINE MIR -66 196 79 2014 150 11 40 chr18 7030482 7030829 -78958105 + MER1B DNA MER1_type 1 337 0 193 309 175 37 chr18 7031183 7031400 -78957534 + MIR SINE MIR 16 262 0 863 145 0 0 chr18 7032457 7032588 -78956346 - FLAM_C SINE Alu -2 131 1 198 0 0 0 chr18 7032604 7032626 -78956308 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 378 0 0 0 chr18 7032625 7032667 -78956267 + (CA)n Simple_repeat Simple_repeat 1 42 0 13976 192 26 14 chr18 7032948 7033012 -78955922 - L1PB1 LINE L1 -298 6569 6507 428 34 0 17 chr18 7033012 7033071 -78955863 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 13976 192 26 14 chr18 7033071 7033880 -78955054 - L1PB1 LINE L1 -360 6507 5709 2452 82 0 3 chr18 7033880 7034184 -78954750 + AluSg SINE Alu 1 303 -7 13976 192 26 14 chr18 7034184 7038528 -78950406 - L1PB1 LINE L1 -1158 5709 1227 977 209 0 0 chr18 7038525 7038721 -78950213 - L1PB1 LINE L1 -6658 205 10 * 823 278 97 58 chr18 7038830 7039582 -78949352 - L1M4 LINE L1 -908 5238 4458 369 289 111 11 chr18 7039647 7039827 -78949107 - L1M4 LINE L1 -1894 4252 4055 221 395 33 9 chr18 7040908 7041123 -78947811 - L2 LINE L2 -755 2559 2340 205 274 0 0 chr18 7041199 7041250 -78947684 + (TATATG)n Simple_repeat Simple_repeat 3 53 0 2847 144 128 9 chr18 7041303 7041836 -78947098 + MER6A DNA MER2_type 1 596 -9 338 243 100 57 chr18 7041844 7041984 -78946950 + L2 LINE L2 3152 3297 -16 714 185 0 87 chr18 7043233 7043406 -78945528 + MER58C DNA MER1_type 57 214 -1 241 155 42 14 chr18 7043528 7043599 -78945335 + (CATATA)n Simple_repeat Simple_repeat 6 78 0 1606 260 86 45 chr18 7045374 7046000 -78942934 + L1ME1 LINE L1 37 688 -5708 347 257 0 0 chr18 7046012 7046086 -78942848 + MER58 DNA MER1_type 20 93 -2327 25 0 0 0 chr18 7046075 7046100 -78942834 + AT_rich Low_complexity Low_complexity 1 25 0 * 268 243 68 27 chr18 7046146 7046220 -78942714 + MER58 DNA MER1_type 2344 2420 0 1350 263 111 10 chr18 7046221 7046925 -78942009 + L1ME1 LINE L1 693 1467 -4929 723 238 115 2 chr18 7046922 7047313 -78941621 + L1ME1 LINE L1 2189 2592 -3623 * 4951 163 54 27 chr18 7047311 7048611 -78940323 + L1MA4 LINE L1 4980 6294 -6 32 26 0 0 chr18 7048627 7048666 -78940268 + AT_rich Low_complexity Low_complexity 1 39 0 2547 215 49 32 chr18 7048670 7049516 -78939418 + L1ME1 LINE L1 5189 6037 -198 432 269 133 9 chr18 7049594 7049807 -78939127 + L1ME1 LINE L1 5933 6170 0 485 113 0 12 chr18 7050382 7050462 -78938472 + MADE1 DNA Mariner 1 79 -1 346 323 31 0 chr18 7051512 7051608 -78937326 + MIR SINE MIR 50 148 -60 328 323 31 0 chr18 7051613 7051740 -78937194 - MER117 DNA MER1_type 0 197 67 460 228 161 62 chr18 7051767 7051960 -78936974 - MIR SINE MIR -14 248 37 437 235 0 31 chr18 7052091 7052189 -78936745 + L2 LINE L2 3219 3313 0 1748 202 19 22 chr18 7053823 7054185 -78934749 + MLT1A2 LTR MaLR 1 361 -13 182 244 24 0 chr18 7054367 7054408 -78934526 + MIR3 SINE MIR 129 170 -38 938 202 91 15 chr18 7055749 7055947 -78932987 + MER20 DNA MER1_type 7 219 0 215 303 66 0 chr18 7056422 7056498 -78932436 - L2 LINE L2 -1 3312 3232 354 23 0 0 chr18 7057504 7057547 -78931387 + (CA)n Simple_repeat Simple_repeat 2 44 0 217 271 49 82 chr18 7058277 7058399 -78930535 - MIR SINE MIR -82 180 63 234 353 147 10 chr18 7058730 7058934 -78930000 - L2 LINE L2 -352 2962 2731 245 286 0 12 chr18 7059484 7059568 -78929366 + L1ME LINE L1 5563 5645 -476 2105 87 3 11 chr18 7059643 7059929 -78929005 + AluSg SINE Alu 1 284 -26 278 96 0 19 chr18 7059929 7059981 -78928953 + (TA)n Simple_repeat Simple_repeat 2 52 0 260 253 74 0 chr18 7060030 7060125 -78928809 + L1ME LINE L1 5677 5778 -343 30 59 0 0 chr18 7060456 7060507 -78928427 + AT_rich Low_complexity Low_complexity 1 51 0 1804 173 27 25 chr18 7060747 7061151 -78927783 - L1MB3 LINE L1 -8 6175 5771 2597 201 16 30 chr18 7061187 7061944 -78926990 - L1MB3 LINE L1 -405 5778 5037 17473 29 0 0 chr18 7062008 7064114 -78924820 - L1P LINE L1 -1804 4342 2237 580 174 42 54 chr18 7064151 7064356 -78924578 - MER39 LTR ERV1 -2 705 582 1111 169 310 9 chr18 7064394 7064720 -78924214 - LTR48 LTR ERV1 -363 424 1 868 192 9 103 chr18 7165336 7165560 -78823374 + MER58A DNA MER1_type 19 221 -3 352 333 39 5 chr18 7165561 7165765 -78823169 - LTR33 LTR ERVL -13 508 298 499 189 9 9 chr18 7165816 7165922 -78823012 - MLT1A2 LTR MaLR 0 374 269 262 314 16 8 chr18 7166022 7166146 -78822788 - L2 LINE L2 -222 3050 2926 314 303 131 5 chr18 7166222 7166420 -78822514 + MIR SINE MIR 34 256 -6 3397 203 20 44 chr18 7166421 7167143 -78821791 + L1MB5 LINE L1 4325 5063 -1111 3397 154 3 10 chr18 7167143 7167732 -78821202 - L1PA16 LINE L1 -6 6160 5576 3397 203 20 44 chr18 7167732 7168658 -78820276 + L1MB5 LINE L1 5063 5923 -251 2098 101 3 24 chr18 7168802 7169099 -78819835 + AluSq SINE Alu 9 299 -14 25 0 0 0 chr18 7169237 7169262 -78819672 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr18 7169572 7169595 -78819339 + AT_rich Low_complexity Low_complexity 1 23 0 772 239 0 12 chr18 7169671 7169838 -78819096 + FRAM SINE Alu 1 165 -11 691 205 0 0 chr18 7169964 7170091 -78818843 + FLAM_A SINE Alu 11 137 -5 571 340 30 53 chr18 7170568 7170918 -78818016 - HERV16 LTR ERVL -2039 2957 2600 5167 93 81 18 chr18 7170918 7171695 -78817239 - LTR12 LTR ERV1 0 826 1 571 340 30 53 chr18 7171695 7171892 -78817042 - HERV16 LTR ERVL -2396 2600 2970 2233 80 0 13 chr18 7171892 7172191 -78816743 + AluY SINE Alu 1 295 -16 571 340 30 53 chr18 7172191 7172361 -78816573 - HERV16 LTR ERVL -2025 2971 2799 289 194 15 0 chr18 7173614 7173681 -78815253 + LTR60 LTR ERV1 1 68 -518 1441 210 30 30 chr18 7173727 7174093 -78814841 + LTR43 LTR ERV1 96 461 -141 518 259 38 57 chr18 7174674 7174886 -78814048 - LTR41 LTR ERVL -10 763 556 453 192 179 32 chr18 7175461 7175617 -78813317 - LTR41 LTR ERVL -594 179 1 2343 97 0 0 chr18 7175642 7175940 -78812994 + AluSx SINE Alu 1 298 -14 33 25 0 0 chr18 7177511 7177551 -78811383 + AT_rich Low_complexity Low_complexity 1 40 0 1680 206 58 12 chr18 7178303 7178720 -78810214 + MER63B DNA MER1_type 1 436 0 1288 271 132 26 chr18 7178789 7179487 -78809447 + L1MC4a LINE L1 5461 6232 -1576 1342 190 15 114 chr18 7179644 7180049 -78808885 + MLT1A1 LTR MaLR 1 365 0 2375 61 0 0 chr18 7180148 7180445 -78808489 + AluY SINE Alu 1 297 -14 889 124 0 0 chr18 7182061 7182190 -78806744 + FLAM_C SINE Alu 3 131 -2 21 0 0 0 chr18 7182190 7182211 -78806723 + AT_rich Low_complexity Low_complexity 1 21 0 2922 236 123 29 chr18 7182336 7182661 -78806273 - L1MC4 LINE L1 -2 8040 7747 2493 171 49 31 chr18 7182661 7182706 -78806228 - MLT2B1 LTR ERVL 0 520 477 402 21 0 0 chr18 7182706 7182753 -78806181 + (CA)n Simple_repeat Simple_repeat 2 48 0 2493 171 49 31 chr18 7182753 7183216 -78805718 - MLT2B1 LTR ERVL -43 477 3 2922 236 123 29 chr18 7183216 7184049 -78804885 - L1MC4 LINE L1 -295 7747 6773 2658 145 12 1 chr18 7184266 7185042 -78803892 - L1M2 LINE L1 -568 5723 4937 2548 122 46 46 chr18 7185043 7185542 -78803392 + L1MA7 LINE L1 5791 6289 -2 1460 241 63 72 chr18 7185744 7186437 -78802497 + L1M4 LINE L1 2668 3366 -2780 2452 61 0 3 chr18 7186437 7186748 -78802186 + AluY SINE Alu 1 310 -1 1460 241 63 72 chr18 7186748 7187020 -78801914 + L1M4 LINE L1 3366 3624 -2522 2533 40 0 3 chr18 7187020 7187321 -78801613 - AluY SINE Alu -11 300 1 1460 241 63 72 chr18 7187321 7187462 -78801472 + L1M4 LINE L1 3624 3765 -2381 309 257 30 0 chr18 7187462 7187563 -78801371 - LTR16C LTR ERVL -18 473 370 1140 270 81 54 chr18 7187903 7188385 -78800549 - L2 LINE L2 -940 2374 1880 192 77 0 0 chr18 7188690 7188716 -78800218 + (TA)n Simple_repeat Simple_repeat 2 27 0 182 91 30 0 chr18 7188746 7188779 -78800155 + (TG)n Simple_repeat Simple_repeat 2 35 0 241 118 40 26 chr18 7188786 7188862 -78800072 + (TA)n Simple_repeat Simple_repeat 1 77 0 290 308 104 23 chr18 7189587 7190050 -78798884 - L1M4 LINE L1 -3314 2832 2301 766 142 14 34 chr18 7190050 7190198 -78798736 - L1MA4 LINE L1 0 6300 6156 290 308 104 23 chr18 7190198 7190377 -78798557 - L1M4 LINE L1 -3845 2301 2138 22 56 0 0 chr18 7190844 7190880 -78798054 + AT_rich Low_complexity Low_complexity 1 36 0 445 255 0 11 chr18 7190880 7190974 -78797960 + L2 LINE L2 3185 3277 -36 910 334 74 0 chr18 7191145 7191549 -78797385 + LTR33 LTR ERVL 82 515 -6 481 319 64 0 chr18 7192171 7192328 -78796606 - MIR SINE MIR -79 183 17 219 244 148 0 chr18 7192463 7192578 -78796356 + MIR SINE MIR 130 261 -1 9661 217 19 5 chr18 7193507 7196289 -78792645 + L1PA12 LINE L1 7 2748 -4836 1609 139 104 14 chr18 7196289 7196569 -78792365 + AluSx SINE Alu 1 305 -7 9661 217 19 5 chr18 7196569 7197036 -78791898 + L1PA12 LINE L1 2748 3207 -4377 2237 103 0 16 chr18 7197036 7197348 -78791586 + AluY SINE Alu 1 307 -4 9661 217 19 5 chr18 7197348 7199670 -78789264 + L1PA12 LINE L1 3207 5662 -1922 377 39 20 0 chr18 7199713 7199764 -78789170 + (CA)n Simple_repeat Simple_repeat 1 52 0 1383 214 130 3 chr18 7199863 7200186 -78788748 + MLT1A1 LTR MaLR 2 365 0 973 171 40 5 chr18 7200772 7200994 -78787940 + L1MA8 LINE L1 6056 6285 -6 10287 139 23 4 chr18 7201555 7203316 -78785618 + L1PBa LINE L1 3 1797 -5066 493 209 9 0 chr18 7203314 7203424 -78785510 - L1 LINE L1 -2108 4038 3928 * 550 175 0 0 chr18 7203431 7203528 -78785406 - L1P LINE L1 -1548 4598 4502 257 143 0 0 chr18 7203535 7203577 -78785357 + L1PB1 LINE L1 159 200 -6663 9902 202 33 34 chr18 7203602 7204111 -78784823 + L1PB1 LINE L1 1763 2271 -4596 2100 125 0 28 chr18 7204111 7204430 -78784504 + AluY SINE Alu 1 310 -1 9902 202 33 34 chr18 7204430 7205178 -78783756 + L1PB1 LINE L1 2271 3018 -3849 2140 95 0 14 chr18 7205178 7205490 -78783444 + AluY SINE Alu 1 308 0 9902 202 33 34 chr18 7205490 7207639 -78781295 + L1PB1 LINE L1 3018 5167 -1700 250 44 22 22 chr18 7207639 7207684 -78781250 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 9902 202 33 34 chr18 7207684 7209384 -78779550 + L1PB1 LINE L1 5167 6867 0 867 146 15 0 chr18 7209518 7209648 -78779286 + FLAM_C SINE Alu 1 132 -1 13683 169 34 9 chr18 7209698 7215152 -78773782 + L1MA2 LINE L1 13 5854 -1869 2185 117 30 0 chr18 7215152 7215451 -78773483 + AluSc SINE Alu 1 308 -1 13683 169 34 9 chr18 7215451 7217368 -78771566 + L1MA2 LINE L1 5854 7722 -1 354 314 155 56 chr18 7218113 7218352 -78770582 - L2 LINE L2 -114 3199 2985 2650 51 0 0 chr18 7218352 7218663 -78770271 - AluY SINE Alu 0 311 1 354 314 155 56 chr18 7218663 7218719 -78770215 - L2 LINE L2 -328 2985 2936 1498 202 115 12 chr18 7218719 7219050 -78769884 + MLT1A1 LTR MaLR 1 365 0 354 314 155 56 chr18 7219050 7219198 -78769736 - L2 LINE L2 -377 2936 2684 284 331 7 69 chr18 7219300 7219445 -78769489 - MER5B DNA MER1_type -22 156 21 212 371 26 26 chr18 7219349 7219465 -78769469 + MER5A DNA MER1_type 74 189 0 * 272 262 78 10 chr18 7220781 7220884 -78768050 + MER20B DNA MER1_type 1 110 -673 7470 167 59 11 chr18 7220949 7223020 -78765914 + L1MA4 LINE L1 3647 5615 -685 541 39 13 13 chr18 7223020 7223097 -78765837 + (TA)n Simple_repeat Simple_repeat 2 78 0 7470 167 59 11 chr18 7223097 7223260 -78765674 + L1MA4 LINE L1 5615 5769 -531 2343 116 11 8 chr18 7223260 7223614 -78765320 - THE1A LTR MaLR 0 355 1 11432 101 5 6 chr18 7223614 7225195 -78763739 - THE1A-int LTR MaLR 0 1580 1 2112 116 56 9 chr18 7225197 7225534 -78763400 - THE1A LTR MaLR -2 353 1 7470 167 59 11 chr18 7225534 7225821 -78763113 + L1MA4 LINE L1 5769 6295 -5 1446 271 64 17 chr18 7225848 7226424 -78762510 + MER20B DNA MER1_type 167 769 -14 414 314 65 38 chr18 7226569 7226754 -78762180 - MIR SINE MIR 0 262 73 1362 219 42 4 chr18 7226908 7227168 -78761766 + AluJb SINE Alu 1 270 -42 889 171 82 19 chr18 7227236 7227493 -78761441 + MER33 DNA MER1_type 47 319 -5 21 0 0 0 chr18 7227998 7228019 -78760915 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr18 7228286 7228321 -78760613 + AT_rich Low_complexity Low_complexity 1 35 0 285 386 126 31 chr18 7228786 7228913 -78760021 + L2 LINE L2 3118 3256 -16 252 297 0 0 chr18 7229450 7229514 -78759420 + GA-rich Low_complexity Low_complexity 1 64 0 217 320 67 0 chr18 7229584 7229659 -78759275 + L2 LINE L2 3231 3310 -3 2672 234 38 23 chr18 7229894 7230825 -78758109 + L1M4 LINE L1 2200 3144 -3002 462 309 6 0 chr18 7230832 7230994 -78757940 + L1P3 LINE L1 10 172 -6289 2245 80 0 3 chr18 7230995 7231315 -78757619 + AluY SINE Alu 1 319 0 11823 161 13 8 chr18 7231318 7231496 -78757438 + L1P LINE L1 2014 2190 -3956 1883 124 42 0 chr18 7231496 7231824 -78757110 + L1PB1 LINE L1 5819 6161 0 11823 161 13 8 chr18 7231824 7233959 -78754975 + L1P LINE L1 2190 4343 -1803 637 285 24 16 chr18 7233976 7234225 -78754709 - L1ME3A LINE L1 -314 5856 5606 248 234 30 0 chr18 7234226 7234301 -78754633 - L1P4 LINE L1 -581 5584 5508 1143 159 23 0 chr18 7234594 7234814 -78754120 - L1MB4 LINE L1 -10 6170 5946 567 226 58 7 chr18 7235727 7235864 -78753070 - MER58B DNA MER1_type 0 341 198 * 6892 186 148 21 chr18 7235862 7237413 -78751521 - MER52A LTR ERV1 -7 1748 1 1753 133 16 3 chr18 7237416 7237901 -78751033 - MER52A-int LTR ERV1 -2 7089 6564 * 10504 136 15 6 chr18 7237895 7240789 -78748145 - MER52A-int LTR ERV1 -3826 3265 427 428 189 0 11 chr18 7240813 7240908 -78748026 + GA-rich Low_complexity Low_complexity 1 94 0 2897 137 7 0 chr18 7240910 7241348 -78747586 - MER52A-int LTR ERV1 -6650 441 1 5719 180 149 55 chr18 7241348 7242873 -78746061 - MER52A LTR ERV1 0 1755 3 673 299 67 8 chr18 7243260 7243528 -78745406 + LTR16C LTR ERVL 173 456 -35 293 308 1 40 chr18 7243665 7243778 -78745156 + MIR SINE MIR 38 146 -66 4442 191 45 7 chr18 7243807 7244835 -78744099 - L1MC3 LINE L1 -19 7766 6700 1191 276 15 49 chr18 7245250 7245712 -78743222 + L1M4 LINE L1 3029 3464 -2682 2208 129 0 0 chr18 7245712 7246014 -78742920 + AluSg SINE Alu 1 302 -8 1191 276 15 49 chr18 7246014 7246210 -78742724 + L1M4 LINE L1 3464 3665 -2481 1336 247 36 36 chr18 7246388 7246655 -78742279 + L1M4 LINE L1 4025 4291 -1855 2337 81 0 10 chr18 7246655 7246962 -78741972 + AluY SINE Alu 1 304 -7 1336 247 36 36 chr18 7246962 7247228 -78741706 + L1M4 LINE L1 4290 4558 -1588 642 272 38 14 chr18 7247235 7247448 -78741486 - MER58A DNA MER1_type 0 224 7 370 221 57 8 chr18 7247532 7247654 -78741280 + L1M4 LINE L1 5259 5386 -760 537 170 40 0 chr18 7247997 7248097 -78740837 + L1P5 LINE L1 5586 5689 -467 10166 195 99 21 chr18 7248099 7248963 -78739971 + L1MA2 LINE L1 17 812 -6753 1994 147 147 13 chr18 7248963 7249337 -78739597 + MSTA LTR MaLR 1 424 -4 10166 195 99 21 chr18 7249337 7250089 -78738845 + L1MA2 LINE L1 812 1504 -6061 288 0 0 0 chr18 7250089 7250121 -78738813 + (CA)n Simple_repeat Simple_repeat 1 32 0 10166 195 99 21 chr18 7250121 7250578 -78738356 + L1MA2 LINE L1 1504 2253 -5312 21 82 0 0 chr18 7250582 7250631 -78738303 + AT_rich Low_complexity Low_complexity 1 49 0 379 100 0 0 chr18 7250652 7250712 -78738222 + L1MA2 LINE L1 2249 2308 -5257 3089 176 23 8 chr18 7250730 7251770 -78737164 + L1MA2 LINE L1 3112 4169 -3396 3383 199 29 19 chr18 7252534 7253359 -78735575 + L1MA2 LINE L1 4165 4997 -2568 43547 35 22 0 chr18 7253361 7259380 -78729554 + L1PA2 LINE L1 1 6154 -1 6227 183 14 18 chr18 7259374 7260629 -78728305 + L1MA2 LINE L1 4981 6231 -1334 * 6895 110 19 14 chr18 7260615 7261725 -78727209 + L1MA2 LINE L1 6608 7723 0 2252 163 63 0 chr18 7261758 7261809 -78727125 + L1PA16 LINE L1 5725 5771 -395 192 77 0 0 chr18 7261809 7261835 -78727099 + (TA)n Simple_repeat Simple_repeat 2 27 0 2252 163 63 0 chr18 7261835 7262182 -78726752 + L1PA16 LINE L1 5771 6148 -18 475 294 96 23 chr18 7262553 7262771 -78726163 + MIR SINE MIR 23 256 -6 409 356 8 0 chr18 7264019 7264151 -78724783 + MIR SINE MIR 71 203 -59 245 200 18 0 chr18 7264236 7264291 -78724643 + T-rich Low_complexity Low_complexity 3 58 0 272 68 0 23 chr18 7264714 7264758 -78724176 + (ATG)n Simple_repeat Simple_repeat 2 44 0 2422 84 0 0 chr18 7265015 7265326 -78723608 - AluY SINE Alu 0 311 1 329 256 224 32 chr18 7265539 7265758 -78723176 + L2 LINE L2 3006 3266 -6 293 335 80 6 chr18 7266541 7266717 -78722217 + MIR SINE MIR 7 195 -67 2333 112 0 0 chr18 7266720 7267024 -78721910 + AluSx SINE Alu 1 304 -8 5191 139 70 33 chr18 7267470 7268341 -78720593 - MER4D LTR ERV1 0 903 1 383 259 199 8 chr18 7269227 7269358 -78719576 + MER5A DNA MER1_type 33 188 -1 253 337 11 11 chr18 7270110 7270199 -78718735 + MIR SINE MIR 16 104 -158 852 137 0 8 chr18 7270525 7270656 -78718278 + MSTD LTR MaLR 1 130 -266 2696 78 26 6 chr18 7270710 7271057 -78717877 + THE1A LTR MaLR 2 355 0 2131 134 0 0 chr18 7271181 7271473 -78717461 + AluSx SINE Alu 1 292 -20 441 240 82 62 chr18 7272143 7272289 -78716645 + L2 LINE L2 2944 3092 -221 974 220 57 37 chr18 7272294 7272539 -78716395 - MSTD LTR MaLR -2 394 145 556 171 54 9 chr18 7272726 7272837 -78716097 - MSTD LTR MaLR -280 116 1 350 313 50 22 chr18 7272841 7273020 -78715914 + L2 LINE L2 3112 3295 -18 286 333 31 10 chr18 7273107 7273203 -78715731 - MIR SINE MIR -75 133 36 627 320 114 0 chr18 7273255 7273483 -78715451 + MIR SINE MIR 3 256 -6 222 37 0 0 chr18 7273732 7273759 -78715175 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 242 335 26 13 chr18 7274522 7274677 -78714257 + L1ME LINE L1 341 497 -5573 1137 271 28 67 chr18 7274712 7275091 -78713843 + L1ME LINE L1 466 709 -5269 1994 163 58 22 chr18 7275091 7275453 -78713481 + THE1C LTR MaLR 1 375 0 1137 271 28 67 chr18 7275453 7275753 -78713181 + L1ME LINE L1 709 1019 -4959 201 176 0 0 chr18 7275826 7275860 -78713074 + (TTA)n Simple_repeat Simple_repeat 2 35 0 1184 184 12 32 chr18 7276231 7276481 -78712453 - MLT1A2 LTR MaLR 0 374 130 2090 58 176 225 chr18 7276483 7277070 -78711864 + LTR12 LTR ERV1 3 560 -154 681 173 31 14 chr18 7277070 7277209 -78711725 - MLT1A1 LTR MaLR -229 161 4 241 344 94 28 chr18 7277230 7277267 -78711667 + MER115 DNA AcHobo 1 34 -659 1698 214 29 29 chr18 7277267 7277641 -78711293 + MLT1A2 LTR MaLR 1 374 0 241 344 94 28 chr18 7277641 7277783 -78711151 + MER115 DNA AcHobo 34 192 -501 1155 274 77 10 chr18 7277804 7278205 -78710729 + LTR16A LTR ERVL 17 444 -6 620 119 9 46 chr18 7278438 7278547 -78710387 + MER115 DNA AcHobo 542 646 -47 247 133 178 0 chr18 7279868 7279913 -78709021 + MADE1 DNA Mariner 28 80 0 1841 132 67 0 chr18 7280025 7280356 -78708578 - MER47A DNA MER2_type 0 366 14 1939 191 24 49 chr18 7281226 7281651 -78707283 + MLT2D LTR ERVL 1 414 0 2127 178 12 0 chr18 7282022 7282365 -78706569 + MER7A DNA MER2_type 1 345 -1 1720 177 28 0 chr18 7282809 7282970 -78705964 - AluJo SINE Alu -21 291 117 243 0 0 0 chr18 7282970 7282997 -78705937 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1720 177 28 0 chr18 7282997 7283118 -78705816 - AluJo SINE Alu -195 117 1 392 269 39 58 chr18 7283120 7283276 -78705658 - MIR SINE MIR -65 197 45 363 197 28 0 chr18 7284975 7285046 -78703888 + MER67B LTR ERV1 589 661 0 1361 224 9 68 chr18 7285278 7285599 -78703335 + AluJb SINE Alu 1 302 0 3550 166 23 0 chr18 7285647 7286261 -78702673 + L1PA16 LINE L1 5517 6144 -22 2156 47 4 0 chr18 7286957 7287213 -78701721 + L1PA4 LINE L1 5896 6152 -3 358 203 39 62 chr18 7287781 7287909 -78701025 + LTR33 LTR ERVL 42 166 -355 520 220 128 20 chr18 7287917 7288097 -78700837 + MLT1B LTR MaLR 1 191 -183 207 114 0 0 chr18 7288108 7288143 -78700791 + (TCCC)n Simple_repeat Simple_repeat 3 37 0 814 231 45 20 chr18 7288146 7288345 -78700589 + MLT1B LTR MaLR 187 390 0 536 284 44 10 chr18 7288396 7288600 -78700334 + LTR33 LTR ERVL 298 508 -13 954 188 9 103 chr18 7288601 7288825 -78700109 - MER58A DNA MER1_type -3 221 19 310 323 38 13 chr18 7289405 7289563 -78699371 + LTR33 LTR ERVL 347 508 -13 817 210 9 103 chr18 7289564 7289788 -78699146 - MER58A DNA MER1_type -3 221 19 2229 104 3 0 chr18 7290717 7291014 -78697920 + AluSg SINE Alu 1 298 -12 2185 189 74 45 chr18 7291205 7291469 -78697465 - MLT1D LTR MaLR -3 502 216 207 69 0 0 chr18 7291469 7291498 -78697436 + (CA)n Simple_repeat Simple_repeat 1 29 0 2185 189 74 45 chr18 7291498 7291721 -78697213 - MLT1D LTR MaLR -289 216 1 1987 164 5 84 chr18 7291791 7292207 -78696727 - MLT1B LTR MaLR -7 383 1 1169 201 84 95 chr18 7292403 7292771 -78696163 + MLT1A2 LTR MaLR 11 374 0 238 304 106 64 chr18 7292774 7293086 -78695848 - L2 LINE L2 -961 2353 2029 524 327 29 22 chr18 7293181 7293459 -78695475 - LTR16B LTR ERVL -13 451 172 3002 131 106 16 chr18 7293618 7294130 -78694804 + LTR64 LTR ERVK 1 558 0 2356 58 0 0 chr18 7294481 7294755 -78694179 + AluY SINE Alu 29 302 -9 2872 144 2 9 chr18 7294982 7295411 -78693523 + MSTA LTR MaLR 3 428 0 479 248 53 15 chr18 7295743 7295876 -78693058 + MIR SINE MIR 4 141 -121 245 239 33 43 chr18 7295985 7296077 -78692857 + L1MC4a LINE L1 5945 6035 -1773 249 235 0 29 chr18 7296270 7296338 -78692596 + CT-rich Low_complexity Low_complexity 2 67 0 204 264 320 0 chr18 7296544 7296669 -78692265 - MIR SINE MIR -70 192 28 1866 170 110 56 chr18 7296782 7297211 -78691723 + LTR47A LTR ERVL 1 452 0 968 203 52 17 chr18 7297810 7298042 -78690892 + LTR16C LTR ERVL 252 491 0 221 224 35 35 chr18 7298125 7298183 -78690751 + L2 LINE L2 3211 3268 -4 477 269 110 1 chr18 7299865 7300045 -78688889 - L1MC/D LINE L1 -534 5628 5444 604 285 105 35 chr18 7300293 7300521 -78688413 + MIR SINE MIR 6 249 -13 1162 188 18 0 chr18 7300677 7300895 -78688039 + AluJo SINE Alu 87 308 -4 183 80 0 0 chr18 7302052 7302077 -78686857 + (CA)n Simple_repeat Simple_repeat 2 26 0 626 267 5 55 chr18 7302090 7302292 -78686642 - MIR SINE MIR -6 256 65 207 333 0 0 chr18 7302340 7302403 -78686531 + C-rich Low_complexity Low_complexity 2 64 0 238 262 0 16 chr18 7302881 7302942 -78685992 + (CAA)n Simple_repeat Simple_repeat 2 61 0 514 295 49 6 chr18 7302962 7303145 -78685789 - MIR SINE MIR -65 197 7 249 380 23 8 chr18 7303142 7303271 -78685663 + MIR3 SINE MIR 68 198 -10 * 30 45 0 0 chr18 7303549 7303593 -78685341 + AT_rich Low_complexity Low_complexity 1 44 0 2057 111 0 0 chr18 7304503 7304835 -78684099 + AluY SINE Alu 1 332 0 350 336 9 0 chr18 7305545 7305655 -78683279 - L2 LINE L2 0 3313 3203 1476 128 144 12 chr18 7306261 7306518 -78682416 + AluSg1 SINE Alu 1 291 -18 1344 187 3 102 chr18 7307401 7307733 -78681201 + AluJb SINE Alu 1 299 -3 828 203 33 6 chr18 7307760 7307942 -78680992 + L1MC1 LINE L1 6142 6328 -5 2594 46 0 30 chr18 7307945 7308273 -78680661 - AluYb8 SINE Alu 0 318 1 2156 108 7 33 chr18 7309676 7309982 -78678952 + AluSq SINE Alu 1 298 -15 254 320 196 0 chr18 7310460 7310654 -78678280 + MIR SINE MIR 34 262 0 335 385 107 28 chr18 7310744 7311635 -78677299 - L2 LINE L2 -1372 1942 982 311 294 109 0 chr18 7312355 7312447 -78676487 - MIR SINE MIR -114 148 47 3459 89 30 58 chr18 7312455 7312601 -78676333 + MER41A LTR ERV1 1 150 -404 693 24 0 0 chr18 7312601 7312685 -78676249 + L1PA5 LINE L1 6066 6149 -5 3459 89 30 58 chr18 7312685 7313108 -78675826 + MER41A LTR ERV1 150 554 0 197 342 79 15 chr18 7313965 7314094 -78674840 - MIR SINE MIR -71 137 10 1692 203 3 10 chr18 7314172 7314477 -78674457 + AluJo SINE Alu 3 305 -7 4680 93 67 0 chr18 7315138 7315783 -78673151 + LTR12 LTR ERV1 1 688 0 17426 103 9 8 chr18 7315825 7318434 -78670500 + HERV9 LTR ERV1 40 2630 -1994 485 239 204 18 chr18 7320026 7320227 -78668707 - MIR SINE MIR -25 237 1 1043 264 33 3 chr18 7322283 7322582 -78666352 + L1MEc LINE L1 437 744 -5652 672 190 0 9 chr18 7323663 7323779 -78665155 - FLAM_A SINE Alu -18 115 1 232 323 0 10 chr18 7324984 7325080 -78663854 + MLT1K LTR MaLR 458 552 -36 459 292 0 0 chr18 7325100 7325213 -78663721 - MER94 DNA DNA -18 116 4 229 292 22 0 chr18 7325490 7325579 -78663355 - MER103 DNA DNA -1 165 75 10211 110 3 3 chr18 7326009 7327527 -78661407 + HERV17 LTR ERV1 1455 2972 -5427 1185 138 5 0 chr18 7327526 7327714 -78661220 + HERV17 LTR ERV1 4756 4944 -3455 * 1811 122 31 14 chr18 7327715 7328102 -78660832 + HERV17 LTR ERV1 703 1047 -5860 1703 98 0 11 chr18 7328091 7328501 -78660433 + HERV17 LTR ERV1 1275 1720 -5176 * 4525 91 5 0 chr18 7328496 7329136 -78659798 + HERV17 LTR ERV1 7757 8399 0 5254 74 132 0 chr18 7329136 7329866 -78659068 + LTR12 LTR ERV1 1 826 0 1681 176 7 14 chr18 7329907 7330241 -78658693 - AluJb SINE Alu 0 332 1 723 274 78 51 chr18 7330500 7330785 -78658149 - MLT1L LTR MaLR 0 615 339 669 252 0 0 chr18 7330785 7330916 -78658018 - FLAM_A SINE Alu -2 131 1 723 274 78 51 chr18 7330916 7331188 -78657746 - MLT1L LTR MaLR -276 339 14 2172 137 0 6 chr18 7331275 7331588 -78657346 + AluSx SINE Alu 1 311 -1 24 0 0 0 chr18 7331846 7331870 -78657064 + AT_rich Low_complexity Low_complexity 1 24 0 4997 134 10 12 chr18 7332237 7333073 -78655861 - HSMAR2 DNA Mariner 0 1302 469 1578 214 121 7 chr18 7333350 7333611 -78655323 + MLT2C2 LTR ERVL 1 231 -233 575 219 9 0 chr18 7333611 7333725 -78655209 + FLAM_C SINE Alu 1 115 -18 1578 214 121 7 chr18 7333725 7333878 -78655056 + MLT2C2 LTR ERVL 231 462 -2 213 39 0 0 chr18 7335258 7335284 -78653650 + (A)n Simple_repeat Simple_repeat 1 26 0 291 352 56 37 chr18 7335576 7335738 -78653196 - L2 LINE L2 -4 3268 3104 2709 162 17 22 chr18 7335772 7336418 -78652516 + LTR34 LTR ERV1 3 683 -16 2552 181 40 21 chr18 7336950 7337480 -78651454 + MER67A LTR ERV1 1 540 -3 273 213 6 37 chr18 7337536 7337621 -78651313 - MLT1J2 LTR MaLR -8 427 316 234 323 8 40 chr18 7337740 7337864 -78651070 - MLT1I LTR MaLR -250 159 40 2247 133 120 5 chr18 7338104 7338488 -78650446 + MSTA LTR MaLR 1 428 0 271 200 27 13 chr18 7338651 7338726 -78650208 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 2037 174 47 10 chr18 7338762 7339215 -78649719 - LTR29 LTR ERV1 0 644 160 360 260 0 0 chr18 7339246 7339342 -78649592 - MER34 LTR ERV1 -446 96 1 2900 137 20 24 chr18 7339403 7339900 -78649034 - MER41E LTR ERV1 0 512 18 301 154 108 0 chr18 7340175 7340240 -78648694 - MER96B DNA MER1_type? -173 244 173 1334 198 116 49 chr18 7340292 7340742 -78648192 - MER31A LTR ERV1 0 485 6 470 164 31 101 chr18 7340747 7340781 -78648153 + MER96B DNA MER1_type? 270 305 -112 2200 101 11 0 chr18 7340781 7341068 -78647866 - AluSc SINE Alu -19 290 1 470 164 31 101 chr18 7341068 7341192 -78647742 + MER96B DNA MER1_type? 305 417 0 1699 204 61 57 chr18 7341949 7342508 -78646426 + MER34B LTR ERV1 5 565 0 2432 178 131 43 chr18 7342710 7343433 -78645501 + LTR48 LTR ERV1 1 787 0 296 286 23 23 chr18 7343438 7343571 -78645363 + MLT1K LTR MaLR 456 588 0 21 0 0 0 chr18 7343599 7343620 -78645314 + AT_rich Low_complexity Low_complexity 1 21 0 1748 168 52 0 chr18 7343711 7343997 -78644937 + AluSq SINE Alu 1 301 -12 328 293 7 34 chr18 7344637 7344784 -78644150 + L1ME4a LINE L1 5559 5701 -420 27 49 0 0 chr18 7345831 7345872 -78643062 + AT_rich Low_complexity Low_complexity 1 41 0 360 301 110 14 chr18 7345890 7346036 -78642898 + L1ME4a LINE L1 5754 5913 -208 332 316 122 25 chr18 7346840 7347077 -78641857 + MIR SINE MIR 1 260 -2 330 281 133 0 chr18 7348272 7348407 -78640527 + L3 LINE CR1 186 338 -1239 408 361 28 0 chr18 7349974 7350118 -78638816 + MIR SINE MIR 58 205 -57 13124 191 31 35 chr18 7350208 7351124 -78637810 - L1MA3 LINE L1 -7 6480 5562 1814 167 16 7 chr18 7351124 7351430 -78637504 - AluJo SINE Alu -3 309 1 13124 191 31 35 chr18 7351430 7354642 -78634292 - L1MA3 LINE L1 -925 5562 2368 736 221 27 58 chr18 7354656 7354950 -78633984 - L1MA3 LINE L1 -4113 2215 1931 1998 161 113 23 chr18 7354965 7355356 -78633578 + MSTA LTR MaLR 3 428 0 8786 162 12 35 chr18 7355358 7356973 -78631961 + MSTA-int LTR MaLR 3 1580 0 1233 198 76 35 chr18 7356983 7357326 -78631608 + MSTA LTR MaLR 17 373 -2 3632 235 30 12 chr18 7357351 7358683 -78630251 - L1MA3 LINE L1 -4065 1263 544 * 5245 231 49 46 chr18 7358677 7360665 -78628269 + L1PB4 LINE L1 1076 3062 -3786 19844 122 13 16 chr18 7360667 7363986 -78624948 + L1PA6 LINE L1 3 3311 -2835 15694 70 3 2 chr18 7364088 7366297 -78622637 - L1P LINE L1 -1158 4988 2778 15241 75 8 1 chr18 7366400 7369203 -78619731 + L1PA6 LINE L1 3334 6143 -11 11629 198 30 11 chr18 7369205 7372017 -78616917 + L1PB4 LINE L1 3045 5910 -938 1557 130 16 0 chr18 7372007 7372261 -78616673 + L1PB4 LINE L1 6258 6515 -343 * 2150 123 3 7 chr18 7372723 7373033 -78615901 + AluSq SINE Alu 1 309 -4 3249 92 18 0 chr18 7373295 7373740 -78615194 + MLT2A2 LTR ERVL 1 453 0 1473 218 14 11 chr18 7374469 7374823 -78614111 + L1PB4 LINE L1 6504 6858 0 195 375 28 56 chr18 7374930 7375074 -78613860 - L2 LINE L2 -17 3255 3116 1908 177 66 52 chr18 7375408 7375911 -78613023 - LTR54 LTR ERV1 0 510 1 216 0 0 0 chr18 7376370 7376394 -78612540 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 237 245 32 25 chr18 7376890 7376974 -78611960 - MIR SINE MIR -81 127 72 21 71 0 0 chr18 7377035 7377077 -78611857 + AT_rich Low_complexity Low_complexity 1 42 0 1005 234 21 25 chr18 7377382 7377621 -78611313 + MER8 DNA MER2_type 1 238 -1 1484 273 64 9 chr18 7378702 7379281 -78609653 + L1ME3 LINE L1 5508 6118 -44 380 336 25 0 chr18 7379299 7379421 -78609513 - MIR3 SINE MIR -2 206 82 194 329 43 0 chr18 7379440 7379510 -78609424 - L2 LINE L2 -43 3229 3157 23 0 0 0 chr18 7379527 7379550 -78609384 + AT_rich Low_complexity Low_complexity 1 23 0 239 307 11 23 chr18 7379592 7379680 -78609254 - MIR3 SINE MIR -119 89 3 308 250 0 0 chr18 7380310 7380374 -78608560 - LTR16C LTR ERVL 0 491 428 607 298 37 5 chr18 7380450 7380665 -78608269 - LTR16C LTR ERVL -199 292 71 2085 103 41 0 chr18 7381110 7381401 -78607533 + AluSx SINE Alu 1 303 -9 1507 282 71 13 chr18 7381418 7382096 -78606838 - HAL1b LINE L1 -252 1096 380 183 80 0 0 chr18 7382193 7382218 -78606716 + (TTCC)n Simple_repeat Simple_repeat 1 25 0 2270 123 3 0 chr18 7382269 7382579 -78606355 - AluSp SINE Alu -2 311 1 209 235 0 39 chr18 7383101 7383152 -78605782 + MIR SINE MIR 101 149 -113 1931 136 35 32 chr18 7383156 7383530 -78605404 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr18 7384965 7384986 -78603948 + AT_rich Low_complexity Low_complexity 1 21 0 868 160 101 0 chr18 7386982 7387151 -78601783 + MER2 DNA MER2_type 21 206 -139 410 247 80 30 chr18 7387287 7387563 -78601371 + MLT1L LTR MaLR 224 606 -9 887 230 72 10 chr18 7387746 7387955 -78600979 - MER58A DNA MER1_type 0 224 3 315 282 49 37 chr18 7388278 7388441 -78600493 + MLT1J LTR MaLR 347 511 0 478 309 83 26 chr18 7388971 7389201 -78599733 + MIR SINE MIR 9 251 -11 587 321 74 25 chr18 7389233 7389638 -78599296 - MLT1J LTR MaLR -23 488 64 2046 149 0 9 chr18 7389641 7389956 -78598978 + AluSx SINE Alu 1 312 0 823 149 22 0 chr18 7390907 7391041 -78597893 - FLAM_A SINE Alu 0 142 6 352 313 87 70 chr18 7392940 7393145 -78595789 - L2 LINE L2 -4 3309 3109 2493 164 37 45 chr18 7393145 7393680 -78595254 + LTR26B LTR ERV1 1 531 0 352 313 87 70 chr18 7393680 7393944 -78594990 - L2 LINE L2 -204 3109 2832 416 307 40 7 chr18 7394460 7394734 -78594200 + L1M4 LINE L1 4744 5026 -1120 1755 116 27 14 chr18 7394739 7395033 -78593901 + L1MC1 LINE L1 6011 6308 -25 673 176 0 8 chr18 7395033 7395152 -78593782 + AluJb SINE Alu 17 134 -178 375 212 114 23 chr18 7395157 7395289 -78593645 + L1M4 LINE L1 5013 5156 -990 1642 141 14 7 chr18 7395606 7395890 -78593044 + MER72 LTR ERV1 1 286 -436 1039 132 44 22 chr18 7395891 7396073 -78592861 - AluJo SINE Alu -46 266 81 470 143 13 0 chr18 7396073 7396150 -78592784 - MER72 LTR ERV1 -537 185 108 627 144 0 10 chr18 7396150 7396247 -78592687 - AluJo SINE Alu -210 102 7 2307 172 16 0 chr18 7396248 7396690 -78592244 + MER72 LTR ERV1 274 722 0 439 335 79 9 chr18 7398414 7398641 -78590293 + L2 LINE L2 2625 2867 -447 1461 167 71 36 chr18 7398780 7399061 -78589873 - AluJo SINE Alu -21 291 1 305 175 18 0 chr18 7399093 7399150 -78589784 + MIR SINE MIR 120 177 -85 1666 296 93 36 chr18 7400980 7402575 -78586359 - L1ME3 LINE L1 -310 5852 4116 210 71 0 0 chr18 7402575 7402603 -78586331 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 1666 296 93 36 chr18 7402603 7402997 -78585937 - L1ME3 LINE L1 -2046 4116 3746 239 371 41 10 chr18 7403443 7403540 -78585394 - L2 LINE L2 -16 3256 3157 366 23 0 0 chr18 7403690 7403733 -78585201 + (TG)n Simple_repeat Simple_repeat 2 44 0 556 297 11 17 chr18 7403972 7404147 -78584787 - MER5A DNA MER1_type -2 187 14 293 280 213 24 chr18 7408373 7408584 -78580350 - MLT1L LTR MaLR -364 251 1 232 316 32 0 chr18 7408934 7409029 -78579905 - MIR SINE MIR -5 257 160 203 315 0 56 chr18 7409463 7409552 -78579382 - MIR SINE MIR -111 151 68 185 95 0 48 chr18 7409932 7409974 -78578960 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 2180 184 45 2 chr18 7410009 7410454 -78578480 - MLT2C2 LTR ERVL 0 464 1 1249 258 119 21 chr18 7411681 7412209 -78576725 + MLT1G1 LTR MaLR 5 584 -11 294 164 18 0 chr18 7412212 7412267 -78576667 - MIR SINE MIR -98 164 109 6378 101 45 4 chr18 7412341 7413523 -78575411 + L1MA3 LINE L1 5076 6305 0 21 36 0 0 chr18 7413617 7413645 -78575289 + AT_rich Low_complexity Low_complexity 1 28 0 37 23 0 0 chr18 7413762 7413806 -78575128 + AT_rich Low_complexity Low_complexity 1 44 0 1676 174 7 0 chr18 7415547 7415817 -78573117 + AluSx SINE Alu 22 293 -19 716 201 0 84 chr18 7415981 7416052 -78572882 - MER20 DNA MER1_type -55 164 89 4491 194 46 26 chr18 7416052 7417072 -78571862 + MER45B DNA AcHobo 1 1040 0 716 201 0 84 chr18 7417072 7417179 -78571755 - MER20 DNA MER1_type -130 89 1 2118 150 0 3 chr18 7417224 7417537 -78571397 + AluSx SINE Alu 1 312 0 246 279 0 0 chr18 7417709 7417777 -78571157 - Charlie2 DNA MER1_type -2531 251 184 312 247 0 26 chr18 7417940 7418017 -78570917 - Charlie2 DNA MER1_type -2767 95 21 377 313 28 33 chr18 7418284 7418466 -78570468 - MIR SINE MIR -48 214 34 198 171 0 0 chr18 7418559 7418600 -78570334 + (TA)n Simple_repeat Simple_repeat 2 42 0 495 153 153 0 chr18 7419350 7419448 -78569486 + FLAM_A SINE Alu 10 122 -20 197 294 17 76 chr18 7419643 7419762 -78569172 - L2 LINE L2 -1 3271 3160 326 278 21 10 chr18 7419772 7419869 -78569065 - MER5B DNA MER1_type -6 172 75 3080 131 44 16 chr18 7420131 7420467 -78568467 - L1PB4 LINE L1 -13 6143 5785 303 93 0 0 chr18 7420467 7420510 -78568424 + (TATG)n Simple_repeat Simple_repeat 2 44 0 3080 131 44 16 chr18 7420510 7420717 -78568217 - L1PB4 LINE L1 -371 5785 5585 234 333 0 0 chr18 7421265 7421331 -78567603 + L2 LINE L2 3207 3272 0 1634 201 3 16 chr18 7422073 7422377 -78566557 + AluJb SINE Alu 1 300 -12 189 180 40 20 chr18 7422708 7422758 -78566176 - MIR SINE MIR -141 121 71 230 317 75 70 chr18 7423464 7423650 -78565284 - MIR SINE MIR -68 194 8 310 331 106 25 chr18 7424245 7424490 -78564444 + L1ME4a LINE L1 5813 6077 -44 2743 208 53 10 chr18 7424720 7425339 -78563595 + MER82 DNA MER2_type 2 647 -6 3120 242 25 6 chr18 7425344 7425377 -78563557 + L1ME2 LINE L1 2295 2326 -3820 6226 186 21 46 chr18 7425377 7427455 -78561479 + L1PA15 LINE L1 4106 6160 -5 3120 242 25 6 chr18 7427455 7428406 -78560528 + L1ME2 LINE L1 2326 3298 -2848 1538 205 55 29 chr18 7428412 7428793 -78560141 - MSTD LTR MaLR 0 396 6 2863 231 26 9 chr18 7428800 7429453 -78559481 - MSTD-int LTR MaLR -2 1733 1019 2502 114 31 57 chr18 7429462 7430008 -78558926 + LTR21A LTR ERV1 1 498 -7 3337 241 62 46 chr18 7430008 7431000 -78557934 - MSTD-int LTR MaLR -727 1008 2 1423 224 63 22 chr18 7431002 7431364 -78557570 - MSTD LTR MaLR 0 396 20 365 269 117 16 chr18 7431365 7431614 -78557320 + L1ME2 LINE L1 3306 3579 -2567 1404 225 14 43 chr18 7431672 7432041 -78556893 - MLT1A2 LTR MaLR -6 368 11 2386 241 73 22 chr18 7432041 7432804 -78556130 + L1ME2 LINE L1 3936 4751 -1395 1526 168 8 77 chr18 7432804 7433192 -78555742 - MER46B DNA MER2_type 0 236 1 2386 241 73 22 chr18 7433192 7433302 -78555632 + L1ME2 LINE L1 4751 4854 -1292 762 215 215 9 chr18 7433304 7433452 -78555482 - AluJo SINE Alu -9 303 187 584 27 14 0 chr18 7433452 7433526 -78555408 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 762 215 215 9 chr18 7433526 7433610 -78555324 - AluJo SINE Alu -125 187 23 676 236 31 0 chr18 7433610 7433771 -78555163 + MLT1A1 LTR MaLR 199 364 -1 662 230 71 54 chr18 7433774 7434013 -78554921 + L1ME1 LINE L1 5906 6148 -18 181 267 158 10 chr18 7436703 7436804 -78552130 + MIR SINE MIR 135 250 -12 24 32 0 0 chr18 7438215 7438246 -78550688 + GC_rich Low_complexity Low_complexity 1 31 0 416 247 135 47 chr18 7439869 7440039 -78548895 + MIR SINE MIR 2 186 -76 484 245 161 19 chr18 7440164 7440240 -78548694 - MER5A DNA MER1_type 0 189 125 2509 98 6 14 chr18 7440240 7440598 -78548336 + THE1A LTR MaLR 1 355 0 484 245 161 19 chr18 7440598 7440676 -78548258 - MER5A DNA MER1_type -64 125 13 1976 153 7 0 chr18 7441249 7441543 -78547391 - AluJb SINE Alu -8 304 9 324 312 0 24 chr18 7443319 7443447 -78545487 + GA-rich Low_complexity Low_complexity 1 124 0 2640 223 71 33 chr18 7443868 7444908 -78544026 + L1ME2 LINE L1 5056 6142 -22 23 54 0 0 chr18 7445051 7445088 -78543846 + AT_rich Low_complexity Low_complexity 1 37 0 376 289 147 40 chr18 7445196 7445421 -78543513 - L2 LINE L2 0 3272 3024 2209 154 61 17 chr18 7445473 7445881 -78543053 + MSTB LTR MaLR 1 426 0 285 98 0 0 chr18 7446770 7446811 -78542123 + (T)n Simple_repeat Simple_repeat 1 41 0 676 284 108 90 chr18 7447331 7447786 -78541148 + L2 LINE L2 2809 3271 -1 216 196 0 22 chr18 7447892 7447938 -78540996 + (TATG)n Simple_repeat Simple_repeat 2 46 0 464 233 38 79 chr18 7447972 7448238 -78540696 - L1MC5 LINE L1 -48 7913 7659 231 310 43 9 chr18 7448491 7448607 -78540327 - L1M4c LINE L1 -4684 1700 1581 342 269 139 0 chr18 7450108 7450216 -78538718 - L2 LINE L2 -8 3305 3183 2716 173 65 6 chr18 7450660 7450692 -78538242 - MLT2B1 LTR ERVL 0 520 491 228 111 0 0 chr18 7450692 7450728 -78538206 + (TA)n Simple_repeat Simple_repeat 1 36 0 2716 173 65 6 chr18 7450728 7451186 -78537748 - MLT2B1 LTR ERVL -29 491 1 31 0 0 0 chr18 7451435 7451466 -78537468 + AT_rich Low_complexity Low_complexity 1 31 0 227 360 72 46 chr18 7452057 7452210 -78536724 - L2 LINE L2 -20 3252 3096 855 171 163 43 chr18 7452915 7452991 -78535943 + MER46B DNA MER2_type 3 68 -2663 2697 71 6 3 chr18 7452991 7453344 -78535590 - THE1A LTR MaLR -1 354 1 855 171 163 43 chr18 7453344 7453445 -78535489 + MER46B DNA MER2_type 68 98 -2633 347 0 0 23 chr18 7453445 7453489 -78535445 + (TA)n Simple_repeat Simple_repeat 1 43 0 855 171 163 43 chr18 7453489 7453568 -78535366 + MER46B DNA MER2_type 98 166 -70 560 142 0 28 chr18 7453633 7453739 -78535195 + MER46B DNA MER2_type 134 236 0 261 326 182 8 chr18 7454022 7454154 -78534780 - L2 LINE L2 0 3272 3118 470 274 201 19 chr18 7454669 7454928 -78534006 - L2 LINE L2 0 3313 3008 672 125 149 30 chr18 7455914 7456082 -78532852 + MER53 DNA DNA 1 188 -1 759 139 0 0 chr18 7456481 7456596 -78532338 - FLAM_C SINE Alu -12 131 17 886 91 3 0 chr18 7456907 7457050 -78531884 - L1P LINE L1 -3424 2722 2577 867 146 0 0 chr18 7457195 7457318 -78531616 - FRAM SINE Alu -53 123 1 915 75 0 0 chr18 7457356 7457462 -78531472 - AluSg/x SINE Alu -126 186 81 247 215 165 0 chr18 7457490 7457569 -78531365 - L1ME4a LINE L1 -70 6051 5960 523 230 67 0 chr18 7458089 7458224 -78530710 + MIR3 SINE MIR 56 199 -9 2386 103 0 0 chr18 7458675 7458975 -78529959 - AluSg SINE Alu -10 300 1 261 279 184 19 chr18 7459341 7459499 -78529435 - MIR SINE MIR -32 230 47 2180 117 0 7 chr18 7459691 7459991 -78528943 + AluSx SINE Alu 1 298 -14 1894 148 21 7 chr18 7460139 7460430 -78528504 - AluJb SINE Alu -17 295 1 298 328 50 8 chr18 7460578 7460697 -78528237 + MIR SINE MIR 19 142 -66 699 274 80 26 chr18 7462530 7462756 -78526178 + MIR SINE MIR 4 241 -21 360 279 114 6 chr18 7462801 7462959 -78525975 + MIR3 SINE MIR 25 199 -9 244 333 81 10 chr18 7462981 7463080 -78525854 - L2 LINE L2 -49 3223 3118 532 276 184 22 chr18 7463595 7463867 -78525067 - L2 LINE L2 0 3313 2998 * 646 266 103 9 chr18 7463859 7464073 -78524861 - L2 LINE L2 -1030 2284 2051 210 171 24 0 chr18 7464087 7464128 -78524806 + CT-rich Low_complexity Low_complexity 2 43 0 288 264 229 14 chr18 7464648 7464792 -78524142 - MIR3 SINE MIR 0 208 34 206 265 0 0 chr18 7464953 7465002 -78523932 + A-rich Low_complexity Low_complexity 1 49 0 197 224 119 0 chr18 7465223 7465290 -78523644 + L2 LINE L2 1361 1435 -1879 1206 204 0 9 chr18 7465294 7465519 -78523415 + AluJb SINE Alu 85 307 -5 192 328 23 68 chr18 7465521 7465786 -78523148 + L2 LINE L2 1440 1692 -1622 397 284 108 104 chr18 7466149 7466350 -78522584 + L2 LINE L2 1786 1985 -1329 1760 191 23 0 chr18 7466350 7466654 -78522280 - AluJb SINE Alu -1 311 1 397 284 108 104 chr18 7466654 7466885 -78522049 + L2 LINE L2 1985 2220 -1094 2487 54 0 3 chr18 7466887 7467184 -78521750 - AluY SINE Alu -15 296 1 322 333 0 0 chr18 7467305 7467410 -78521524 + L2 LINE L2 2213 2317 -997 913 303 95 11 chr18 7467416 7467786 -78521148 - L2 LINE L2 0 3313 2913 497 326 130 19 chr18 7467765 7468072 -78520862 + L2 LINE L2 2896 3236 -36 * 245 250 67 17 chr18 7468381 7468441 -78520493 - L2 LINE L2 -17 3296 3234 1550 82 0 0 chr18 7468898 7469106 -78519828 - L1PA13 LINE L1 -11 6152 5945 817 210 37 19 chr18 7469158 7469377 -78519557 + MLT1J2 LTR MaLR 20 246 -200 455 245 138 0 chr18 7469374 7469533 -78519401 + MLT1J1 LTR MaLR 264 444 -2 * 234 342 212 15 chr18 7469545 7469814 -78519120 - L2 LINE L2 -900 2414 2093 1428 205 102 36 chr18 7470848 7471239 -78517695 + MLT2C2 LTR ERVL 5 427 -37 414 0 0 0 chr18 7471239 7471285 -78517649 + (TG)n Simple_repeat Simple_repeat 2 47 0 1428 205 102 36 chr18 7471285 7471313 -78517621 + MLT2C2 LTR ERVL 427 452 -12 7927 194 48 32 chr18 7471609 7471720 -78517214 + L1MB5 LINE L1 2962 3070 -3104 1672 207 33 50 chr18 7471720 7472116 -78516818 - MLT1B LTR MaLR -1 389 1 7927 194 48 32 chr18 7472116 7473712 -78515222 + L1MB5 LINE L1 3070 4752 -1422 2175 128 3 0 chr18 7473712 7474009 -78514925 - AluSx SINE Alu -14 298 1 7927 194 48 32 chr18 7474009 7475456 -78513478 + L1MB5 LINE L1 4752 6174 0 2048 137 0 3 chr18 7475698 7476094 -78512840 + AluSx SINE Alu 1 395 0 24 67 0 0 chr18 7476868 7476913 -78512021 + AT_rich Low_complexity Low_complexity 1 45 0 13328 179 26 19 chr18 7477118 7478871 -78510063 - L1PB1 LINE L1 -2 6865 5126 189 0 0 0 chr18 7478871 7478892 -78510042 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 13328 179 26 19 chr18 7478892 7482762 -78506172 - L1PB1 LINE L1 -1741 5126 1057 241 268 0 85 chr18 7483189 7483271 -78505663 + MIR3 SINE MIR 12 86 -122 206 75 0 50 chr18 7483299 7483339 -78505595 + (TTA)n Simple_repeat Simple_repeat 3 40 0 673 268 60 34 chr18 7483440 7483910 -78505024 + L1ME3 LINE L1 758 1239 -4880 805 302 106 20 chr18 7484036 7484346 -78504588 + L1ME3 LINE L1 4614 4896 -1249 1639 209 10 3 chr18 7484346 7484652 -78504282 + AluJb SINE Alu 5 312 0 805 302 106 20 chr18 7484652 7485558 -78503376 + L1ME3 LINE L1 4896 5934 -211 673 187 18 20 chr18 7486336 7486550 -78502384 - MER93b LTR ERV1 -30 343 98 220 250 0 0 chr18 7489457 7489501 -78499433 + MIR SINE MIR 89 132 -76 675 216 0 29 chr18 7491730 7491869 -78497065 - MER5A DNA MER1_type -26 163 29 2314 182 23 19 chr18 7491869 7492346 -78496588 + MER67C LTR ERV1 1 479 -231 1092 114 9 68 chr18 7492389 7492608 -78496326 + Tigger5 DNA MER2_type 2062 2267 -56 452 345 71 5 chr18 7492609 7492806 -78496128 - L2 LINE L2 -252 3020 2811 436 330 74 37 chr18 7492813 7493083 -78495851 - L3 LINE CR1 -1022 555 276 1429 114 5 0 chr18 7493111 7493304 -78495630 + AluSp SINE Alu 106 299 -14 2094 135 0 3 chr18 7493641 7493945 -78494989 + AluSx SINE Alu 5 307 -5 1997 167 158 2 chr18 7494225 7494661 -78494273 - MLT2B2 LTR ERVL -11 504 1 1028 185 29 0 chr18 7494754 7494959 -78493975 + MER2 DNA MER2_type 1 211 -134 1006 256 74 34 chr18 7495002 7495353 -78493581 + MLT1J LTR MaLR 45 409 -102 252 226 0 0 chr18 7495922 7495984 -78492950 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 391 219 126 126 chr18 7495997 7496266 -78492668 - MLT1H LTR MaLR -31 518 250 2891 194 116 9 chr18 7496345 7497112 -78491822 - MER63C DNA MER1_type -2 928 80 4366 83 3 35 chr18 7497460 7498088 -78490846 - LTR14B LTR ERVK 0 608 1 291 183 70 0 chr18 7498766 7498837 -78490097 + MLT1J LTR MaLR 182 257 -310 354 209 0 0 chr18 7498895 7498962 -78489972 + MLT1J LTR MaLR 26 92 -419 2028 238 60 12 chr18 7498968 7498998 -78489936 - MLT2B2 LTR ERVL -8 507 480 442 0 35 0 chr18 7498998 7499056 -78489878 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 2028 238 60 12 chr18 7499056 7499509 -78489425 - MLT2B2 LTR ERVL -35 480 1 426 233 16 31 chr18 7499783 7499912 -78489022 + MLT1J LTR MaLR 384 510 -1 1863 253 64 10 chr18 7500059 7500562 -78488372 + MLT1F1 LTR MaLR 32 561 -6 321 354 7 20 chr18 7500960 7501107 -78487827 - L2 LINE L2 -687 2627 2483 1276 224 129 11 chr18 7502169 7502518 -78486416 - MSTD LTR MaLR -6 390 1 961 176 126 15 chr18 7502522 7502784 -78486150 + MLT1C LTR MaLR 74 364 -103 1022 238 65 4 chr18 7502785 7503016 -78485918 - MLT1A1 LTR MaLR -120 245 1 513 288 18 36 chr18 7503049 7503382 -78485552 + L1M4 LINE L1 3609 3935 -2211 2268 108 0 10 chr18 7504629 7504934 -78484000 + AluSx SINE Alu 1 302 -10 1352 150 57 156 chr18 7505787 7506013 -78482921 + MER31A LTR ERV1 9 256 -287 2125 168 59 0 chr18 7506013 7506387 -78482547 - MSTD LTR MaLR 0 396 1 1352 150 57 156 chr18 7506387 7506687 -78482247 + MER31A LTR ERV1 256 543 0 303 71 0 0 chr18 7507285 7507327 -78481607 + (CA)n Simple_repeat Simple_repeat 2 43 0 1261 181 122 122 chr18 7507439 7508030 -78480904 + LTR49 LTR ERV1 5 595 0 13320 159 118 15 chr18 7508629 7511273 -78477661 + L1M1 LINE L1 17 2932 -4633 3675 234 40 1 chr18 7511283 7512085 -78476849 + L1PA13 LINE L1 1 833 -5954 730 339 103 6 chr18 7512091 7512439 -78476495 + L1PA13 LINE L1 877 1258 -5529 19015 172 18 12 chr18 7512442 7517806 -78471128 + L1PA13 LINE L1 1396 6794 -20 1066 111 0 25 chr18 7517815 7517977 -78470957 + L1PA10 LINE L1 6001 6158 -10 6390 174 28 8 chr18 7517980 7520248 -78468686 + L1MA2 LINE L1 2923 5238 -2327 2211 110 33 36 chr18 7520248 7520613 -78468321 - THE1B LTR MaLR 0 364 1 10064 101 67 2 chr18 7520613 7522097 -78466837 - THE1B-int LTR MaLR 0 1580 1 2322 121 19 25 chr18 7522097 7522461 -78466473 - THE1B LTR MaLR 0 364 3 7796 137 16 5 chr18 7522461 7524924 -78464010 + L1MA2 LINE L1 5232 7723 0 1267 186 68 68 chr18 7525881 7526246 -78462688 + MLT1A1 LTR MaLR 1 365 0 31 0 0 0 chr18 7526345 7526376 -78462558 + AT_rich Low_complexity Low_complexity 1 31 0 222 231 0 0 chr18 7526553 7526605 -78462329 + T-rich Low_complexity Low_complexity 1 52 0 2988 140 55 16 chr18 7526761 7527305 -78461629 - MER34B LTR ERV1 0 565 1 409 291 71 20 chr18 7527360 7527711 -78461223 + L1ME4a LINE L1 5529 5897 -224 183 100 0 0 chr18 7527728 7527758 -78461176 + (TA)n Simple_repeat Simple_repeat 1 30 0 1390 233 49 11 chr18 7527799 7528250 -78460684 + L1MD3 LINE L1 7528 7995 0 684 239 188 23 chr18 7528249 7528601 -78460333 + HAL1 LINE L1 1102 1511 -996 * 389 248 212 40 chr18 7529099 7529192 -78459742 + HAL1 LINE L1 1587 1663 -844 1916 160 88 15 chr18 7529192 7529395 -78459539 - MSTA LTR MaLR 0 428 241 2426 76 0 13 chr18 7529395 7529698 -78459236 - AluY SINE Alu -12 299 1 1916 160 88 15 chr18 7529698 7529893 -78459041 - MSTA LTR MaLR -187 241 1 389 248 212 40 chr18 7529893 7530021 -78458913 + HAL1 LINE L1 1663 1846 -661 520 219 109 23 chr18 7530151 7530416 -78458518 + HAL1 LINE L1 2035 2322 -185 4489 19 0 0 chr18 7531007 7531617 -78457317 - L1PA3 LINE L1 -705 5450 4841 5468 14 48 0 chr18 7531617 7532260 -78456674 + L1PA3 LINE L1 5475 6152 -3 1272 153 65 9 chr18 7532264 7532493 -78456441 + MER21A LTR ERV1 12 253 -678 2186 169 79 51 chr18 7532516 7533048 -78455886 + MER21A LTR ERV1 384 930 -1 316 327 51 19 chr18 7533578 7533734 -78455200 - MIR3 SINE MIR -1 207 47 645 250 144 0 chr18 7533786 7533966 -78454968 - MIR SINE MIR -49 213 8 365 290 136 7 chr18 7535536 7535691 -78453243 + MIR SINE MIR 6 180 -82 426 296 37 0 chr18 7536548 7536656 -78452278 + L2 LINE L2 3143 3254 -18 363 312 102 6 chr18 7537374 7537531 -78451403 - MIR SINE MIR -75 187 16 21 0 0 0 chr18 7539812 7539833 -78449101 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr18 7540572 7540597 -78448337 + AT_rich Low_complexity Low_complexity 1 25 0 649 256 126 33 chr18 7542390 7542605 -78446329 - MIR SINE MIR -13 249 15 1712 103 32 8 chr18 7545059 7545312 -78443622 - AluSx SINE Alu -53 259 1 286 269 22 22 chr18 7546081 7546215 -78442719 + L1MC4 LINE L1 7153 7286 -756 1714 278 82 23 chr18 7546231 7547337 -78441597 + L1ME3A LINE L1 4714 5879 -291 2005 102 3 25 chr18 7547352 7547636 -78441298 + AluSc SINE Alu 1 278 -31 265 242 146 16 chr18 7547762 7547947 -78440987 + L1ME3A LINE L1 5941 6161 -9 383 250 53 46 chr18 7547983 7548135 -78440799 - MLT1L LTR MaLR -440 175 23 417 66 0 0 chr18 7548669 7548730 -78440204 + (TTTTA)n Simple_repeat Simple_repeat 4 64 0 11167 17 0 0 chr18 7548730 7550843 -78438091 - L1HS LINE L1 -16 6139 4026 3194 251 48 10 chr18 7552304 7553730 -78435204 - ERVL-D LTR ERVL -4210 1554 2 559 112 19 0 chr18 7553785 7553892 -78435042 + (TCTA)n Simple_repeat Simple_repeat 2 110 0 1593 184 16 7 chr18 7553894 7554203 -78434731 - MLT2D LTR ERVL -100 314 3 1759 193 44 42 chr18 7554209 7554712 -78434222 - L1M4 LINE L1 -746 5400 4897 2039 119 3 3 chr18 7554712 7555022 -78433912 + MSTA LTR MaLR 1 310 -118 925 85 31 0 chr18 7555228 7555357 -78433577 + MSTA LTR MaLR 296 428 0 472 235 8 0 chr18 7555361 7555480 -78433454 - L1M4 LINE L1 -1250 4896 4777 1440 235 79 42 chr18 7555489 7556009 -78432925 - LTR55 LTR ERV -8 540 2 1943 226 26 7 chr18 7556010 7556550 -78432384 - L1M4 LINE L1 -1368 4778 4229 697 261 48 41 chr18 7556861 7557411 -78431523 - L1MC5 LINE L1 -271 7690 7261 2386 332 53 22 chr18 7557411 7558719 -78430215 + ERVL LTR ERVL 4055 5403 -361 2389 160 39 5 chr18 7559000 7559412 -78429522 + MSTB LTR MaLR 1 426 0 1409 253 69 53 chr18 7559457 7560343 -78428591 + L1M4 LINE L1 3704 4603 -1543 587 309 119 9 chr18 7560576 7561006 -78427928 + L1M4 LINE L1 4740 5216 -930 291 174 91 17 chr18 7561103 7561228 -78427706 + L1P5 LINE L1 5304 5440 -714 2073 179 5 2 chr18 7561255 7561663 -78427271 + L1PA15-16 LINE L1 2242 2650 -4199 37 0 0 0 chr18 7561893 7561930 -78427004 + GC_rich Low_complexity Low_complexity 1 37 0 34 24 0 0 chr18 7562037 7562078 -78426856 + GC_rich Low_complexity Low_complexity 1 41 0 212 176 39 0 chr18 7562541 7562592 -78426342 + (CG)n Simple_repeat Simple_repeat 2 54 0 26 30 0 0 chr18 7562709 7562742 -78426192 + GC_rich Low_complexity Low_complexity 1 33 0 244 287 160 0 chr18 7563739 7563833 -78425101 + MIR SINE MIR 91 199 -63 190 295 95 42 chr18 7564039 7564134 -78424800 + MIR SINE MIR 142 241 -21 374 274 110 66 chr18 7565383 7565701 -78423233 - L2 LINE L2 -66 3247 2916 425 210 30 0 chr18 7566073 7566173 -78422761 + L1MD3 LINE L1 7887 7989 -6 1781 221 77 36 chr18 7566186 7566913 -78422021 - L1MDa LINE L1 -4782 1758 1002 343 249 67 42 chr18 7567357 7567522 -78421412 - L1M4 LINE L1 -3105 3041 2873 932 207 43 55 chr18 7567615 7567774 -78421160 - L1MC4 LINE L1 0 8042 7883 204 111 0 0 chr18 7567774 7567810 -78421124 + (CA)n Simple_repeat Simple_repeat 2 37 0 932 207 43 55 chr18 7567810 7567998 -78420936 - L1MC4 LINE L1 -159 7883 7699 204 219 132 26 chr18 7569211 7569325 -78419609 + L2 LINE L2 2824 2949 -365 365 308 49 81 chr18 7569532 7569717 -78419217 + MIR SINE MIR 23 201 -61 668 209 13 32 chr18 7569728 7569886 -78419048 - MER6B DNA MER2_type 0 210 56 1051 285 73 16 chr18 7569890 7570259 -78418675 - L2 LINE L2 -32 3281 2892 337 253 142 12 chr18 7570464 7570626 -78418308 - L2 LINE L2 -2655 659 477 2083 124 0 17 chr18 7571529 7571827 -78417107 - AluSx SINE Alu -19 293 1 592 124 0 0 chr18 7572010 7572099 -78416835 - FLAM SINE Alu -17 126 38 2029 219 8 12 chr18 7572114 7572594 -78416340 - L1MD3 LINE L1 0 7995 7518 227 278 0 0 chr18 7572618 7572672 -78416262 + MIR3 SINE MIR 150 203 -5 231 114 0 0 chr18 7572688 7572723 -78416211 + (TA)n Simple_repeat Simple_repeat 1 35 0 393 70 0 0 chr18 7572723 7572780 -78416154 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 1801 125 0 32 chr18 7572780 7573060 -78415874 - AluSc SINE Alu -38 271 1 469 114 10 114 chr18 7573082 7573283 -78415651 + (TA)n Simple_repeat Simple_repeat 1 180 0 226 273 23 0 chr18 7573286 7573374 -78415560 + L1MC4 LINE L1 6614 6703 -1339 * 229 274 24 0 chr18 7573334 7573418 -78415516 - L1MC4 LINE L1 -1339 6703 6618 332 287 0 11 chr18 7573460 7573554 -78415380 + L1MC4 LINE L1 6611 6703 -1339 314 279 35 0 chr18 7573477 7573563 -78415371 - L1MC4 LINE L1 -1339 6703 6615 * 506 272 0 11 chr18 7573600 7573780 -78415154 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 240 261 42 25 chr18 7573805 7573924 -78415010 - L1MC4 LINE L1 -1339 6703 6583 306 260 0 62 chr18 7573925 7574021 -78414913 - L1MC4 LINE L1 -1339 6703 6614 * 320 214 0 82 chr18 7573981 7574079 -78414855 + L1MC4 LINE L1 6614 6703 -1339 * 335 292 0 0 chr18 7574073 7574162 -78414772 - L1MC4 LINE L1 -1339 6703 6615 320 311 0 0 chr18 7574119 7574209 -78414725 + L1MC4 LINE L1 6614 6703 -1339 * 356 151 41 35 chr18 7574212 7574384 -78414550 + (TA)n Simple_repeat Simple_repeat 1 173 0 302 202 37 37 chr18 7574428 7574537 -78414397 + (TTTG)n Simple_repeat Simple_repeat 4 112 0 362 132 0 15 chr18 7574551 7574619 -78414315 + (TA)n Simple_repeat Simple_repeat 2 68 0 248 279 13 0 chr18 7574823 7574902 -78414032 + LTR58 LTR ERV1 350 429 -250 334 285 114 13 chr18 7575797 7575955 -78412979 - MIR3 SINE MIR -10 198 25 642 272 79 35 chr18 7576000 7576228 -78412706 - MIR SINE MIR -21 241 4 295 331 41 16 chr18 7578073 7578194 -78410740 - MIR SINE MIR -66 142 19 1894 148 21 7 chr18 7578342 7578633 -78410301 + AluJb SINE Alu 1 295 -17 2110 116 0 13 chr18 7578782 7579084 -78409850 - AluSx SINE Alu -14 298 1 240 306 169 19 chr18 7579276 7579436 -78409498 + MIR SINE MIR 47 230 -32 2255 102 0 13 chr18 7579803 7580106 -78408828 + AluSg SINE Alu 1 299 -11 495 248 58 7 chr18 7580560 7580697 -78408237 - MIR3 SINE MIR -9 199 56 242 265 121 0 chr18 7581216 7581299 -78407635 + L1ME4a LINE L1 5959 6051 -70 883 75 0 9 chr18 7581327 7581434 -78407500 + AluSg/x SINE Alu 79 184 -126 840 161 0 0 chr18 7581472 7581596 -78407338 + FRAM SINE Alu 1 124 -52 886 91 3 0 chr18 7581753 7581896 -78407038 + L1P LINE L1 2577 2722 -3424 759 139 0 0 chr18 7582208 7582323 -78406611 + FLAM_C SINE Alu 17 131 -12 642 124 148 35 chr18 7582724 7582893 -78406041 - MER53 DNA DNA -1 188 1 232 336 178 0 chr18 7583862 7583969 -78404965 + MIR3 SINE MIR 34 159 -49 199 368 29 29 chr18 7583990 7584161 -78404773 + L2 LINE L2 1016 1186 -2128 263 316 138 65 chr18 7584339 7584861 -78404073 + L2 LINE L2 1587 2146 -1168 202 376 84 11 chr18 7584890 7585068 -78403866 + L2 LINE L2 2337 2527 -787 333 298 51 66 chr18 7585169 7585497 -78403437 + L2 LINE L2 2772 3092 -180 1051 214 129 55 chr18 7585520 7585588 -78403346 - MLT1C LTR MaLR 0 467 405 1615 169 30 27 chr18 7585588 7585884 -78403050 + AluSx SINE Alu 1 297 -15 1051 214 129 55 chr18 7585884 7586181 -78402753 - MLT1C LTR MaLR -62 405 63 1465 187 30 33 chr18 7586181 7586486 -78402448 - AluJo SINE Alu -6 306 3 1051 214 129 55 chr18 7586486 7586554 -78402380 - MLT1C LTR MaLR -404 63 1 275 366 81 0 chr18 7586595 7586718 -78402216 + L2 LINE L2 3137 3269 -3 364 286 59 93 chr18 7587203 7587362 -78401572 - MLT1J LTR MaLR -33 478 315 1056 209 69 10 chr18 7587362 7587668 -78401266 + MER33 DNA MER1_type 1 324 0 364 286 59 93 chr18 7587668 7587896 -78401038 - MLT1J LTR MaLR -196 315 104 355 141 96 133 chr18 7587999 7588060 -78400874 - MLT1J LTR MaLR -337 130 68 1282 208 16 36 chr18 7588060 7588226 -78400708 - AluJo SINE Alu -13 299 140 2310 79 10 3 chr18 7588226 7588517 -78400417 - AluSc SINE Alu -16 293 1 1282 208 16 36 chr18 7588517 7588653 -78400281 - AluJo SINE Alu -172 140 3 355 141 96 133 chr18 7588653 7588726 -78400208 - MLT1J LTR MaLR -399 68 1 331 339 50 42 chr18 7590018 7590278 -78398656 + L1MEd LINE L1 987 1248 -4871 243 0 0 0 chr18 7590292 7590319 -78398615 + (CA)n Simple_repeat Simple_repeat 1 27 0 2608 240 38 32 chr18 7590727 7591474 -78397460 + L1PA12 LINE L1 2 752 -6829 * 11452 136 14 14 chr18 7591468 7594158 -78394776 + L1PA11 LINE L1 3200 5889 -285 2100 134 6 10 chr18 7594158 7594471 -78394463 + AluSx SINE Alu 1 312 0 330 26 0 0 chr18 7594477 7594516 -78394418 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 11452 136 14 14 chr18 7594516 7594618 -78394316 + L1PA11 LINE L1 5894 5999 -175 423 0 0 0 chr18 7694706 7694753 -78294181 + (TG)n Simple_repeat Simple_repeat 1 47 0 585 158 110 43 chr18 7695035 7695199 -78293735 + FRAM SINE Alu 1 175 -1 369 197 0 0 chr18 7695202 7695278 -78293656 + A-rich Low_complexity Low_complexity 1 76 0 747 0 0 0 chr18 7696332 7696415 -78292519 + (GA)n Simple_repeat Simple_repeat 2 84 0 269 216 23 62 chr18 7697367 7697543 -78291391 + (TATATG)n Simple_repeat Simple_repeat 2 170 0 354 23 0 0 chr18 7697747 7697790 -78291144 + (TG)n Simple_repeat Simple_repeat 2 44 0 22 35 0 0 chr18 7698678 7698707 -78290227 + AT_rich Low_complexity Low_complexity 1 29 0 509 311 40 50 chr18 7699002 7699324 -78289610 - L1MD2 LINE L1 -384 5975 5657 249 109 0 0 chr18 7699871 7699917 -78289017 + (T)n Simple_repeat Simple_repeat 1 46 0 23 33 0 0 chr18 7700381 7700411 -78288523 + AT_rich Low_complexity Low_complexity 1 30 0 235 239 0 0 chr18 7701478 7701524 -78287410 - tRNA-Ala-GCG tRNA tRNA -20 55 10 256 254 141 0 chr18 7701597 7701668 -78287266 - FLAM_A SINE Alu -32 101 21 414 39 0 0 chr18 7701767 7701819 -78287115 + (TA)n Simple_repeat Simple_repeat 2 53 0 213 188 0 42 chr18 7702849 7702897 -78286037 + A-rich Low_complexity Low_complexity 2 47 0 210 71 0 0 chr18 7703450 7703478 -78285456 + (TA)n Simple_repeat Simple_repeat 1 28 0 236 184 20 0 chr18 7704085 7704134 -78284800 - Alu SINE Alu -110 193 144 457 53 0 27 chr18 7704615 7704690 -78284244 + (TG)n Simple_repeat Simple_repeat 2 74 0 327 105 0 0 chr18 7704807 7704864 -78284070 + (TG)n Simple_repeat Simple_repeat 2 58 0 187 358 0 15 chr18 7705790 7705857 -78283077 - L2 LINE L2 -531 2783 2718 375 60 0 0 chr18 7706318 7706368 -78282566 + (GA)n Simple_repeat Simple_repeat 1 50 0 206 154 0 58 chr18 7706457 7706509 -78282425 + A-rich Low_complexity Low_complexity 2 50 0 322 281 18 18 chr18 7708367 7708470 -78280464 + MLT2C1 LTR ERVL 236 341 -56 470 70 14 0 chr18 7708470 7708541 -78280393 + (TCTA)n Simple_repeat Simple_repeat 3 74 0 307 221 134 39 chr18 7711464 7711619 -78277315 - FLAM_A SINE Alu -28 105 12 456 213 112 47 chr18 7711888 7712057 -78276877 - FRAM SINE Alu -2 174 1 276 174 0 0 chr18 7712306 7712352 -78276582 + PMER1 DNA MER1_type 8 53 -37 222 233 0 0 chr18 7714089 7714149 -78274785 + (CA)n Simple_repeat Simple_repeat 1 60 0 363 294 0 0 chr18 7714150 7714242 -78274692 + L1MC4 LINE L1 6614 6705 -1337 565 13 0 26 chr18 7714472 7714548 -78274386 + (TC)n Simple_repeat Simple_repeat 2 75 0 23 0 0 0 chr18 7715214 7715237 -78273697 + AT_rich Low_complexity Low_complexity 1 23 0 7002 270 19 10 chr18 7717574 7720765 -78268169 + L1MA9 LINE L1 2710 5931 -381 208 227 15 30 chr18 7722768 7722834 -78266100 + (TATATG)n Simple_repeat Simple_repeat 6 70 0 420 81 0 90 chr18 7723475 7723586 -78265348 + (GGGA)n Simple_repeat Simple_repeat 2 102 0 38 39 0 0 chr18 7724918 7724970 -78263964 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr18 7724993 7725014 -78263920 + AT_rich Low_complexity Low_complexity 1 21 0 322 198 24 111 chr18 7725449 7725575 -78263359 + AluSq/x SINE Alu 2 116 -186 505 234 90 11 chr18 7727098 7727286 -78261648 - L1MA5 LINE L1 -301 5999 5797 266 0 29 0 chr18 7727289 7727323 -78261611 + (TAA)n Simple_repeat Simple_repeat 2 36 0 526 211 100 21 chr18 7728035 7728225 -78260709 - L1MA5 LINE L1 -501 5811 5607 284 230 22 65 chr18 7728269 7728408 -78260526 - L1MA5 LINE L1 -859 5287 5155 228 230 72 40 chr18 7729539 7729623 -78259311 + MIR SINE MIR 70 161 -47 23 68 0 0 chr18 7731093 7731137 -78257797 + AT_rich Low_complexity Low_complexity 1 44 0 216 97 0 0 chr18 7731506 7731537 -78257397 + (CGTG)n Simple_repeat Simple_repeat 1 31 0 432 0 0 0 chr18 7731970 7732018 -78256916 + (TG)n Simple_repeat Simple_repeat 1 48 0 26 82 0 0 chr18 7733140 7733201 -78255733 + AT_rich Low_complexity Low_complexity 1 61 0 564 57 78 7 chr18 7733277 7733418 -78255516 + (TA)n Simple_repeat Simple_repeat 2 152 0 181 379 24 24 chr18 7733596 7733720 -78255214 + MIR SINE MIR 20 143 -119 277 143 16 16 chr18 7734377 7734440 -78254494 + CT-rich Low_complexity Low_complexity 3 65 0 24 32 0 0 chr18 7734458 7734489 -78254445 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr18 7734583 7734612 -78254322 + AT_rich Low_complexity Low_complexity 1 29 0 186 71 0 0 chr18 7735270 7735298 -78253636 + (A)n Simple_repeat Simple_repeat 1 28 0 214 203 51 51 chr18 7736790 7736849 -78252085 + MIR SINE MIR 7 65 -197 24 0 0 0 chr18 7739593 7739617 -78249317 + AT_rich Low_complexity Low_complexity 1 24 0 494 345 103 33 chr18 7739797 7740363 -78248571 - L1ME3A LINE L1 -278 5892 5273 26 0 0 0 chr18 7740443 7740469 -78248465 + AT_rich Low_complexity Low_complexity 1 26 0 259 313 15 8 chr18 7741265 7741399 -78247535 - L1ME3A LINE L1 -2200 3946 3812 22 0 0 0 chr18 7741517 7741539 -78247395 + AT_rich Low_complexity Low_complexity 1 22 0 22 80 0 0 chr18 7741827 7741877 -78247057 + AT_rich Low_complexity Low_complexity 1 50 0 314 48 32 32 chr18 7742977 7743040 -78245894 + (TTTTG)n Simple_repeat Simple_repeat 2 64 0 473 158 120 57 chr18 7743043 7743201 -78245733 - FRAM SINE Alu -1 175 8 273 81 48 0 chr18 7744780 7744842 -78244092 + T-rich Low_complexity Low_complexity 3 67 0 189 0 0 0 chr18 7745005 7745026 -78243908 + (GA)n Simple_repeat Simple_repeat 1 21 0 341 308 0 0 chr18 7745551 7745629 -78243305 + polypyrimidine Low_complexity Low_complexity 3 80 0 971 166 0 33 chr18 7745640 7745821 -78243113 + C-rich Low_complexity Low_complexity 1 175 0 443 168 105 0 chr18 7746781 7746876 -78242058 + FLAM_A SINE Alu 1 105 -37 270 176 0 0 chr18 7749483 7749534 -78239400 + (TATATG)n Simple_repeat Simple_repeat 2 52 0 22 35 0 0 chr18 7749556 7749585 -78239349 + AT_rich Low_complexity Low_complexity 1 29 0 180 97 0 0 chr18 7750114 7750145 -78238789 + (CCTA)n Simple_repeat Simple_repeat 2 32 0 60 59 0 0 chr18 7750160 7750262 -78238672 + AT_rich Low_complexity Low_complexity 1 102 0 444 320 41 30 chr18 7752927 7753292 -78235642 - L1PA15 LINE L1 -235 5930 5562 239 231 0 0 chr18 7753960 7754012 -78234922 + (CATA)n Simple_repeat Simple_repeat 3 54 0 345 300 0 0 chr18 7754017 7754107 -78234827 + L1MC4 LINE L1 6614 6703 -1339 * 359 289 0 0 chr18 7754031 7754121 -78234813 - L1MC4 LINE L1 -1339 6703 6614 897 66 0 0 chr18 7754294 7754415 -78234519 + (GAA)n Simple_repeat Simple_repeat 1 121 0 265 218 30 50 chr18 7754582 7754683 -78234251 + L1MC5 LINE L1 7324 7422 -539 608 282 87 39 chr18 7755910 7755957 -78232977 - L1MA4 LINE L1 -375 5925 5882 279 0 0 0 chr18 7755957 7755988 -78232946 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 608 282 87 39 chr18 7755988 7756273 -78232661 - L1MA4 LINE L1 -418 5882 5577 944 107 0 7 chr18 7756376 7756525 -78232409 + (TTTC)n Simple_repeat Simple_repeat 3 150 0 478 0 0 31 chr18 7757069 7757133 -78231801 + (TTA)n Simple_repeat Simple_repeat 2 63 0 209 239 115 85 chr18 7758193 7758323 -78230611 + MIR SINE MIR 1 134 -128 204 40 0 0 chr18 7758353 7758378 -78230556 + (TTTTTG)n Simple_repeat Simple_repeat 4 28 0 203 288 0 0 chr18 7758937 7759003 -78229931 + (CA)n Simple_repeat Simple_repeat 1 66 0 218 163 41 0 chr18 7760812 7760861 -78228073 + CT-rich Low_complexity Low_complexity 2 52 0 333 47 0 0 chr18 7761272 7761315 -78227619 + (ATG)n Simple_repeat Simple_repeat 2 44 0 23 33 0 0 chr18 7762634 7762664 -78226270 + AT_rich Low_complexity Low_complexity 1 30 0 501 62 0 0 chr18 7763332 7763397 -78225537 + (TC)n Simple_repeat Simple_repeat 1 65 0 23 0 0 0 chr18 7764144 7764167 -78224767 + AT_rich Low_complexity Low_complexity 1 23 0 261 57 0 0 chr18 7766371 7766406 -78222528 + (TG)n Simple_repeat Simple_repeat 2 36 0 287 205 24 24 chr18 7766513 7766596 -78222338 + L1MC5 LINE L1 7698 7780 -181 22 0 0 0 chr18 7767165 7767187 -78221747 + AT_rich Low_complexity Low_complexity 1 22 0 291 219 15 0 chr18 7767932 7768013 -78220921 + MLT2A1 LTR ERVL 367 444 0 21 0 0 0 chr18 7768916 7768937 -78219997 + AT_rich Low_complexity Low_complexity 1 21 0 189 122 102 61 chr18 7769021 7769070 -78219864 - MIR SINE MIR -199 63 13 235 220 0 20 chr18 7772713 7772763 -78216171 + CT-rich Low_complexity Low_complexity 1 49 0 405 0 0 0 chr18 7774101 7774146 -78214788 + (TG)n Simple_repeat Simple_repeat 2 46 0 252 0 0 0 chr18 7776227 7776255 -78212679 + (A)n Simple_repeat Simple_repeat 1 28 0 408 293 84 42 chr18 7778267 7778458 -78210476 + MIR SINE MIR 37 235 -27 213 152 0 91 chr18 7779711 7779810 -78209124 + T-rich Low_complexity Low_complexity 3 92 0 259 175 127 0 chr18 7780249 7780312 -78208622 - AluS SINE Alu -214 89 19 25 0 0 0 chr18 7780358 7780383 -78208551 + AT_rich Low_complexity Low_complexity 1 25 0 226 254 18 0 chr18 7781130 7781185 -78207749 + MLT1A2 LTR MaLR 1 56 -318 27 29 0 0 chr18 7781855 7781889 -78207045 + AT_rich Low_complexity Low_complexity 1 34 0 275 274 106 11 chr18 7781990 7782125 -78206809 + AluSq/x SINE Alu 2 105 -198 526 225 92 17 chr18 7783590 7783763 -78205171 + AluJo SINE Alu 123 308 -4 181 337 95 11 chr18 7783777 7783872 -78205062 + L2 LINE L2 2809 2911 -361 309 68 0 0 chr18 7784521 7784565 -78204369 + (CA)n Simple_repeat Simple_repeat 2 45 0 242 311 42 32 chr18 7784646 7784810 -78204124 + AluSp SINE Alu 133 200 -103 670 84 19 9 chr18 7784826 7784933 -78204001 + (GGGA)n Simple_repeat Simple_repeat 4 111 0 33 25 0 0 chr18 7785095 7785135 -78203799 + AT_rich Low_complexity Low_complexity 1 40 0 26 64 0 0 chr18 7787262 7787309 -78201625 + AT_rich Low_complexity Low_complexity 1 47 0 909 79 0 0 chr18 7790607 7790734 -78198200 + (TG)n Simple_repeat Simple_repeat 2 128 0 239 0 32 0 chr18 7791276 7791307 -78197627 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 330 26 0 0 chr18 7791461 7791500 -78197434 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 333 164 193 44 chr18 7791502 7791650 -78197284 - FRAM SINE Alu -12 154 1 252 186 0 0 chr18 7792583 7792642 -78196292 + (TG)n Simple_repeat Simple_repeat 1 59 0 25 0 0 0 chr18 7793252 7793277 -78195657 + AT_rich Low_complexity Low_complexity 1 25 0 972 106 0 0 chr18 7793993 7794163 -78194771 + (CA)n Simple_repeat Simple_repeat 2 171 0 446 184 179 54 chr18 7794493 7794661 -78194273 - AluJo SINE Alu -11 301 113 24 67 0 0 chr18 7797345 7797390 -78191544 + AT_rich Low_complexity Low_complexity 1 45 0 279 272 97 29 chr18 7797416 7797519 -78191415 + FLAM_C SINE Alu 2 111 -22 216 0 0 0 chr18 7797554 7797578 -78191356 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 191 260 114 65 chr18 7798227 7798350 -78190584 + MIR SINE MIR 123 251 -11 256 227 17 38 chr18 7798839 7799040 -78189894 + C-rich Low_complexity Low_complexity 1 196 0 516 175 0 0 chr18 7799041 7799138 -78189796 + CT-rich Low_complexity Low_complexity 2 98 0 293 281 2 0 chr18 7799729 7799831 -78189103 + L1 LINE L1 5174 5276 -870 546 284 49 55 chr18 7801887 7802566 -78186368 + L1M2 LINE L1 1231 2079 -4304 180 0 0 0 chr18 7802615 7802635 -78186299 + (A)n Simple_repeat Simple_repeat 1 20 0 240 328 98 25 chr18 7803095 7803217 -78185717 - MIR SINE MIR -47 215 85 688 117 38 16 chr18 7808013 7808253 -78180681 + (CAGAGA)n Simple_repeat Simple_repeat 1 245 0 222 37 0 0 chr18 7808506 7808533 -78180401 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 202 57 0 57 chr18 7809052 7809087 -78179847 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 314 125 0 0 chr18 7813549 7813597 -78175337 - PMER1 DNA MER1_type -37 53 6 34 0 0 0 chr18 7814089 7814123 -78174811 + AT_rich Low_complexity Low_complexity 1 34 0 417 20 0 0 chr18 7815349 7815399 -78173535 + (GA)n Simple_repeat Simple_repeat 1 50 0 23 0 0 0 chr18 7816575 7816598 -78172336 + AT_rich Low_complexity Low_complexity 1 23 0 405 289 66 0 chr18 7817225 7817377 -78171557 + FRAM SINE Alu 1 161 -15 207 0 0 0 chr18 7817385 7817408 -78171526 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 25 65 0 0 chr18 7817912 7817958 -78170976 + AT_rich Low_complexity Low_complexity 1 46 0 305 318 73 69 chr18 7820532 7820777 -78168157 - L1MB7 LINE L1 -78 6106 5861 244 224 14 75 chr18 7821312 7821459 -78167475 - L1MB7 LINE L1 -768 5410 5273 31 0 0 0 chr18 7822113 7822144 -78166790 + AT_rich Low_complexity Low_complexity 1 31 0 320 185 66 13 chr18 7822152 7822303 -78166631 + (TA)n Simple_repeat Simple_repeat 2 160 0 477 294 79 25 chr18 7822657 7823084 -78165850 - L1PB2 LINE L1 -233 5918 5445 385 295 59 15 chr18 7823240 7823523 -78165411 - L1ME LINE L1 -734 5432 5141 429 20 0 0 chr18 7824148 7824198 -78164736 + (TG)n Simple_repeat Simple_repeat 1 50 0 283 203 29 14 chr18 7825206 7825275 -78163659 + (TG)n Simple_repeat Simple_repeat 1 70 0 24 32 0 0 chr18 7825953 7825984 -78162950 + AT_rich Low_complexity Low_complexity 1 31 0 27 49 0 0 chr18 7826603 7826644 -78162290 + AT_rich Low_complexity Low_complexity 1 41 0 408 253 97 23 chr18 7826648 7826948 -78161986 - L1ME LINE L1 -1316 4830 4509 21 0 0 0 chr18 7827626 7827647 -78161287 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr18 7828053 7828076 -78160858 + AT_rich Low_complexity Low_complexity 1 23 0 372 133 0 0 chr18 7828434 7828494 -78160440 + (T)n Simple_repeat Simple_repeat 1 60 0 23 33 0 0 chr18 7828887 7828917 -78160017 + AT_rich Low_complexity Low_complexity 1 30 0 308 237 30 96 chr18 7830041 7830176 -78158758 + AluSq/x SINE Alu 2 105 -198 660 118 0 0 chr18 7830484 7830611 -78158323 + (TAGA)n Simple_repeat Simple_repeat 4 130 0 353 212 61 91 chr18 7831235 7831367 -78157567 - FLAM_C SINE Alu -2 131 4 228 342 137 0 chr18 7831635 7831752 -78157182 + MIR3 SINE MIR 52 184 -24 24 67 0 0 chr18 7832009 7832054 -78156880 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr18 7833422 7833444 -78155490 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr18 7834668 7834691 -78154243 + AT_rich Low_complexity Low_complexity 1 23 0 248 296 92 0 chr18 7834806 7834904 -78154030 + AluSp SINE Alu 5 111 -192 186 241 52 35 chr18 7834978 7835036 -78153898 + MIR SINE MIR 6 64 -198 571 178 142 12 chr18 7835448 7835617 -78153317 + AluJo SINE Alu 120 310 -2 212 0 36 0 chr18 7836055 7836083 -78152851 + (TTG)n Simple_repeat Simple_repeat 2 30 0 180 0 0 0 chr18 7837018 7837038 -78151896 + (CACAG)n Simple_repeat Simple_repeat 3 22 0 359 231 9 0 chr18 7839004 7839112 -78149822 + (CA)n Simple_repeat Simple_repeat 2 110 0 255 157 0 0 chr18 7839115 7839166 -78149768 - MER4-int LTR ERV1 -5436 1162 1112 399 202 0 0 chr18 7839166 7839260 -78149674 + (CA)n Simple_repeat Simple_repeat 1 94 0 282 56 0 0 chr18 7839646 7839682 -78149252 + (ATTG)n Simple_repeat Simple_repeat 1 36 0 1286 101 10 3 chr18 7841927 7842224 -78146710 + (GAAA)n Simple_repeat Simple_repeat 2 300 0 276 316 149 44 chr18 7843083 7843856 -78145078 + L2 LINE L2 1299 2152 -1162 299 319 71 53 chr18 7844121 7844347 -78144587 + L2 LINE L2 2070 2299 -1015 1780 249 13 9 chr18 7845544 7846075 -78142859 + L1MA4 LINE L1 5398 5930 -370 27 0 0 0 chr18 7846728 7846755 -78142179 + AT_rich Low_complexity Low_complexity 1 27 0 282 56 0 0 chr18 7846770 7846806 -78142128 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 215 161 65 48 chr18 7847026 7847088 -78141846 - MIR SINE MIR -194 68 6 206 239 0 30 chr18 7848284 7848351 -78140583 + (AGCTG)n Simple_repeat Simple_repeat 2 66 0 235 200 29 29 chr18 7848849 7848919 -78140015 + (TATG)n Simple_repeat Simple_repeat 3 72 0 312 27 0 0 chr18 7849672 7849709 -78139225 + (CA)n Simple_repeat Simple_repeat 2 38 0 26 30 0 0 chr18 7849806 7849839 -78139095 + AT_rich Low_complexity Low_complexity 1 33 0 21 57 0 0 chr18 7850069 7850104 -78138830 + AT_rich Low_complexity Low_complexity 1 35 0 588 305 79 10 chr18 7850118 7850546 -78138388 - L1MC1 LINE L1 -197 6136 5674 203 0 37 0 chr18 7852623 7852650 -78136284 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1344 290 88 25 chr18 7853451 7854265 -78134669 + L1PB4 LINE L1 4478 5343 -803 504 284 27 50 chr18 7854271 7854570 -78134364 + L1PB4 LINE L1 5417 5708 -453 336 24 0 0 chr18 7854594 7854635 -78134299 + (TTGG)n Simple_repeat Simple_repeat 4 44 0 371 279 14 58 chr18 7854701 7854909 -78134025 + L1PB4 LINE L1 5732 5930 -226 458 75 15 0 chr18 7856639 7856706 -78132228 + (CA)n Simple_repeat Simple_repeat 2 69 0 237 250 0 56 chr18 7859734 7859806 -78129128 + L1MD2 LINE L1 6203 6270 -89 288 0 0 0 chr18 7860975 7861007 -78127927 + (CA)n Simple_repeat Simple_repeat 2 33 0 21 0 0 0 chr18 7861445 7861466 -78127468 + AT_rich Low_complexity Low_complexity 1 21 0 272 244 20 26 chr18 7864209 7864314 -78124620 + AluSp SINE Alu 137 202 -101 1181 105 0 6 chr18 7864354 7864400 -78124534 + (GGAA)n Simple_repeat Simple_repeat 1 225 0 1181 105 0 6 chr18 7864400 7864581 -78124353 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 315 0 0 0 chr18 7865519 7865554 -78123380 + (TA)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr18 7866331 7866356 -78122578 + AT_rich Low_complexity Low_complexity 1 25 0 231 36 0 0 chr18 7868698 7868726 -78120208 + (T)n Simple_repeat Simple_repeat 1 28 0 380 272 16 0 chr18 7870512 7870637 -78118297 + L1MC3 LINE L1 6963 7089 -696 262 256 11 0 chr18 7873703 7873793 -78115141 - L1MA7 LINE L1 -4 6287 6197 222 135 0 58 chr18 7874281 7874333 -78114601 + (TTTTA)n Simple_repeat Simple_repeat 1 49 0 22 80 0 0 chr18 7874533 7874583 -78114351 + AT_rich Low_complexity Low_complexity 1 50 0 216 0 0 0 chr18 7878762 7878786 -78110148 + (CAA)n Simple_repeat Simple_repeat 1 24 0 225 250 16 0 chr18 7881026 7881090 -78107844 + CT-rich Low_complexity Low_complexity 3 67 0 231 204 0 0 chr18 7881117 7881171 -78107763 + (TG)n Simple_repeat Simple_repeat 2 55 0 376 347 106 15 chr18 7881938 7882344 -78106590 + L1M2 LINE L1 1635 2077 -4772 22 0 0 0 chr18 7883648 7883670 -78105264 + AT_rich Low_complexity Low_complexity 1 22 0 221 346 167 11 chr18 7885564 7885827 -78103107 + L2 LINE L2 2481 2784 -530 191 233 163 23 chr18 7886375 7886461 -78102473 + L2 LINE L2 3158 3255 -58 180 245 38 19 chr18 7887239 7887292 -78101642 + L2 LINE L2 396 449 -2865 234 0 0 0 chr18 7887459 7887485 -78101449 + (A)n Simple_repeat Simple_repeat 1 26 0 279 268 0 0 chr18 7888709 7888780 -78100154 - L1MA5 LINE L1 -48 6252 6182 1170 85 0 0 chr18 7888833 7889010 -78099924 + (TG)n Simple_repeat Simple_repeat 1 177 0 332 318 52 32 chr18 7889120 7889472 -78099462 - L1MA4 LINE L1 -305 5995 5631 22 0 0 0 chr18 7889705 7889727 -78099207 + AT_rich Low_complexity Low_complexity 1 22 0 329 268 37 0 chr18 7889886 7889968 -78098966 - L1MA4 LINE L1 -817 5329 5245 308 257 119 37 chr18 7889968 7890077 -78098857 + L1 LINE L1 5089 5206 -940 288 0 0 0 chr18 7892409 7892441 -78096493 + (TA)n Simple_repeat Simple_repeat 2 33 0 243 125 0 0 chr18 7892444 7892484 -78096450 + (TAGA)n Simple_repeat Simple_repeat 2 41 0 210 150 0 0 chr18 7892488 7892528 -78096406 + (TA)n Simple_repeat Simple_repeat 2 41 0 258 95 0 0 chr18 7892530 7892572 -78096362 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 290 329 54 7 chr18 7893030 7893179 -78095755 - Tigger4(Zombi) DNA MER2_type -17 2714 2559 232 260 41 0 chr18 7894614 7894687 -78094247 - L1MA4 LINE L1 -1455 4691 4616 41 48 0 0 chr18 7897380 7897442 -78091492 + AT_rich Low_complexity Low_complexity 1 62 0 180 0 0 0 chr18 7897786 7897806 -78091128 + (TG)n Simple_repeat Simple_repeat 1 20 0 * 450 0 0 0 chr18 7897805 7897855 -78091079 + (GA)n Simple_repeat Simple_repeat 1 50 0 342 0 0 0 chr18 7898338 7898376 -78090558 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 261 139 0 0 chr18 7898411 7898454 -78090480 + (GGA)n Simple_repeat Simple_repeat 3 45 0 250 205 123 74 chr18 7898820 7898942 -78089992 + FLAM_C SINE Alu 2 129 -4 863 270 46 48 chr18 7899234 7899667 -78089267 + L1MB2 LINE L1 5631 6062 -109 420 155 60 12 chr18 7900205 7900373 -78088561 + (TA)n Simple_repeat Simple_repeat 2 177 0 192 77 0 0 chr18 7900928 7900954 -78087980 + (T)n Simple_repeat Simple_repeat 1 26 0 240 203 0 17 chr18 7901060 7901119 -78087815 - tRNA-Lys-AAA tRNA tRNA -13 63 6 776 290 47 28 chr18 7901128 7901600 -78087334 - L1 LINE L1 -1189 4957 4477 265 237 45 41 chr18 7901958 7902126 -78086808 + AluSp SINE Alu 133 191 -112 765 301 20 7 chr18 7902623 7902929 -78086005 - L1 LINE L1 -1891 4255 3946 23 33 0 0 chr18 7903274 7903304 -78085630 + AT_rich Low_complexity Low_complexity 1 30 0 585 341 17 13 chr18 7903456 7903933 -78085001 - L1 LINE L1 -2206 3940 3457 331 238 49 57 chr18 7903971 7904159 -78084775 + L1M2 LINE L1 5390 5579 -599 430 269 86 41 chr18 8004603 8004848 -77984086 - L1ME LINE L1 -327 5794 5539 239 283 101 19 chr18 8004869 8005028 -77983906 - L1ME LINE L1 -2317 5491 5320 2286 112 0 0 chr18 8007136 8007441 -77981493 + AluSq SINE Alu 1 305 -8 2276 87 0 13 chr18 8008306 8008606 -77980328 + AluY SINE Alu 1 296 -15 369 250 0 107 chr18 8009283 8009479 -77979455 + C-rich Low_complexity Low_complexity 3 177 0 797 277 99 47 chr18 8009526 8010205 -77978729 + L2 LINE L2 2545 3312 -1 214 167 0 62 chr18 8010238 8010286 -77978648 + L2 LINE L2 3222 3266 -6 248 333 11 11 chr18 8010414 8010501 -77978433 + MIR SINE MIR 1 87 -175 210 91 0 0 chr18 8010671 8010704 -77978230 + (CA)n Simple_repeat Simple_repeat 2 34 0 3542 132 28 93 chr18 8010894 8011246 -77977688 + L1MC2 LINE L1 5562 5935 -409 1791 128 29 58 chr18 8011246 8011591 -77977343 - MER44D DNA MER2_type -4 605 1 3542 132 28 93 chr18 8011591 8012064 -77976870 + L1MC2 LINE L1 5935 6333 -11 25 31 0 0 chr18 8012096 8012128 -77976806 + AT_rich Low_complexity Low_complexity 1 32 0 1332 222 56 55 chr18 8012231 8012816 -77976118 - L1MC5 LINE L1 -453 7508 6923 238 271 102 107 chr18 8013229 8013337 -77975597 - MER5B DNA MER1_type -1 177 69 1795 133 10 20 chr18 8013337 8013637 -77975297 - AluSx SINE Alu -15 297 1 238 271 102 107 chr18 8013637 8013705 -77975229 - MER5B DNA MER1_type -109 69 2 977 180 48 29 chr18 8013872 8014078 -77974856 - AluJo SINE Alu -16 296 87 207 0 0 0 chr18 8014276 8014299 -77974635 + (TG)n Simple_repeat Simple_repeat 2 24 0 819 152 0 0 chr18 8016984 8017109 -77971825 - FLAM_A SINE Alu -6 127 3 30 45 0 0 chr18 8018378 8018422 -77970512 + AT_rich Low_complexity Low_complexity 1 44 0 279 258 0 0 chr18 8019828 8019894 -77969040 + MER82 DNA MER2_type 587 652 -1 225 108 0 0 chr18 8021639 8021676 -77967258 + (T)n Simple_repeat Simple_repeat 1 37 0 624 257 81 24 chr18 8022396 8022606 -77966328 + MIR SINE MIR 41 262 0 557 254 0 0 chr18 8026602 8026724 -77962210 + FLAM_A SINE Alu 3 124 -9 1540 187 23 0 chr18 8027348 8027653 -77961281 - L1PA16 LINE L1 -2 6164 5853 216 215 46 15 chr18 8027898 8027963 -77960971 + (TATATG)n Simple_repeat Simple_repeat 3 69 0 910 316 76 36 chr18 8030109 8030751 -77958183 + L2 LINE L2 2094 2761 -553 918 280 72 42 chr18 8030755 8031323 -77957611 + MLT1E3 LTR MaLR 1 585 -39 194 188 266 16 chr18 8033089 8033153 -77955781 - MIR SINE MIR -65 197 118 6710 181 126 39 chr18 8035210 8036105 -77952829 + MER52A LTR ERV1 2 818 -937 1905 109 8 11 chr18 8036105 8036412 -77952522 + AluSx SINE Alu 46 312 0 6710 181 126 39 chr18 8036412 8037130 -77951804 + MER52A LTR ERV1 818 1755 0 2274 99 0 20 chr18 8037203 8037507 -77951427 - AluSg SINE Alu -12 298 1 401 276 135 18 chr18 8037533 8037703 -77951231 + MIR3 SINE MIR 17 206 -2 264 325 83 25 chr18 8039137 8039294 -77949640 - L3 LINE CR1 -299 1278 1113 205 132 0 75 chr18 8039544 8039597 -77949337 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 1455 152 63 41 chr18 8040344 8040577 -77948357 + AluSx SINE Alu 37 278 -34 207 0 0 0 chr18 8040577 8040600 -77948334 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1455 152 63 41 chr18 8040600 8040635 -77948299 + AluSx SINE Alu 278 311 -1 1815 144 0 77 chr18 8040743 8041069 -77947865 + AluSx SINE Alu 1 301 -11 216 286 22 33 chr18 8042941 8043032 -77945902 - MIR SINE MIR -91 171 82 2477 86 3 3 chr18 8043061 8043374 -77945560 - AluSq SINE Alu 0 313 1 22 35 0 0 chr18 8044108 8044137 -77944797 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr18 8044774 8044795 -77944139 + AT_rich Low_complexity Low_complexity 1 21 0 624 222 161 0 chr18 8045050 8045212 -77943722 + MER5A DNA MER1_type 2 189 0 1895 118 0 93 chr18 8047004 8047327 -77941607 - AluSx SINE Alu -19 293 1 265 307 93 20 chr18 8047473 8047623 -77941311 + MIR SINE MIR 12 172 -90 23 20 0 61 chr18 8047667 8047716 -77941218 + AT_rich Low_complexity Low_complexity 1 46 0 187 262 0 33 chr18 8050148 8050209 -77938725 - MER5A DNA MER1_type -118 71 13 218 306 0 0 chr18 8054544 8054606 -77934328 + CT-rich Low_complexity Low_complexity 1 62 0 2304 128 8 28 chr18 8056397 8056787 -77932147 + L1PB3 LINE L1 5773 6154 0 331 310 122 30 chr18 8056798 8056995 -77931939 - MIR SINE MIR 0 262 48 231 295 32 53 chr18 8058523 8058618 -77930316 + L3 LINE CR1 1484 1576 -1 211 341 206 25 chr18 8060629 8061398 -77927536 + L2 LINE L2 1697 2604 -710 840 183 22 28 chr18 8061890 8062070 -77926864 - AluJo SINE Alu -14 298 120 225 0 0 0 chr18 8062391 8062416 -77926518 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2342 62 0 33 chr18 8062636 8062940 -77925994 - AluY SINE Alu -17 294 1 21 36 0 0 chr18 8062948 8062976 -77925958 + AT_rich Low_complexity Low_complexity 1 28 0 583 182 83 25 chr18 8063644 8063838 -77925096 - MIR SINE MIR 0 262 7 22 35 0 0 chr18 8064068 8064097 -77924837 + AT_rich Low_complexity Low_complexity 1 29 0 199 292 108 58 chr18 8065168 8065288 -77923646 + L2 LINE L2 3179 3304 -9 1514 178 34 10 chr18 8065443 8065741 -77923193 - AluJo SINE Alu -7 305 1 222 37 0 0 chr18 8066523 8066550 -77922384 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 7081 113 57 15 chr18 8069304 8070486 -77918448 + Tigger3b DNA MER2_type 1 1231 0 2594 58 0 0 chr18 8071182 8071493 -77917441 - AluY SINE Alu 0 311 1 1412 191 47 47 chr18 8071759 8072120 -77916814 + MLT1A1 LTR MaLR 5 365 0 466 362 5 27 chr18 8074695 8074880 -77914054 - MER5A DNA MER1_type -7 182 2 1508 181 0 51 chr18 8075527 8075820 -77913114 - AluJo SINE Alu -18 294 17 2622 30 3 0 chr18 8076107 8076408 -77912526 - AluY SINE Alu -9 302 1 2218 133 3 12 chr18 8077884 8078222 -77910712 + MER1B DNA MER1_type 1 335 -2 248 314 66 0 chr18 8079370 8079491 -77909443 + MIR SINE MIR 134 262 0 216 0 0 0 chr18 8079669 8079693 -77909241 + (T)n Simple_repeat Simple_repeat 1 24 0 186 118 0 0 chr18 8079757 8079791 -77909143 + (CAAAAA)n Simple_repeat Simple_repeat 4 37 0 239 386 8 23 chr18 8080212 8080344 -77908590 + MIR3 SINE MIR 27 156 -52 357 271 35 7 chr18 8080388 8080532 -77908402 - MER117 DNA MER1_type -49 148 1 1525 166 36 0 chr18 8081236 8081616 -77907318 + L1MC/D LINE L1 5167 5556 -743 21 57 0 0 chr18 8081740 8081775 -77907159 + AT_rich Low_complexity Low_complexity 1 35 0 2498 61 0 0 chr18 8083635 8083930 -77905004 + AluY SINE Alu 1 295 -16 528 296 179 28 chr18 8084487 8084879 -77904055 - L3 LINE CR1 -21 1556 1106 322 346 82 13 chr18 8084910 8085069 -77903865 - MIR SINE MIR -12 250 81 518 342 36 73 chr18 8085145 8085621 -77903313 - L3 LINE CR1 -517 1060 603 212 282 56 28 chr18 8085815 8085886 -77903048 - L3 LINE CR1 -1038 539 467 328 319 96 0 chr18 8090076 8090211 -77898723 - MIR SINE MIR -70 192 45 311 321 95 18 chr18 8090283 8090451 -77898483 - MIR3 SINE MIR -8 200 20 5605 183 66 22 chr18 8090885 8092858 -77896076 + L1MA4 LINE L1 12 2034 -4065 201 147 0 0 chr18 8092861 8092895 -77896039 + (TG)n Simple_repeat Simple_repeat 2 35 0 11625 168 21 11 chr18 8093061 8096359 -77892575 + L1MA4 LINE L1 3021 6344 -9 2805 38 21 0 chr18 8096789 8097177 -77891757 + L1PA7 LINE L1 5791 6185 0 356 231 29 48 chr18 8097344 8097448 -77891486 + L3b LINE CR1 1387 1488 -95 28 29 0 0 chr18 8097656 8097691 -77891243 + GC_rich Low_complexity Low_complexity 1 35 0 230 302 0 75 chr18 8098565 8098671 -77890263 + MIR3 SINE MIR 96 193 -15 22 35 0 0 chr18 8098976 8099005 -77889929 + AT_rich Low_complexity Low_complexity 1 29 0 198 357 31 23 chr18 8099428 8099557 -77889377 - L2 LINE L2 -4 3268 3139 2147 126 0 0 chr18 8100607 8100900 -77888034 + AluSx SINE Alu 1 293 -19 334 287 216 43 chr18 8102216 8102893 -77886041 + L2 LINE L2 1711 2504 -810 2070 126 3 43 chr18 8102945 8103271 -77885663 + AluSq SINE Alu 1 313 0 21 0 0 0 chr18 8103967 8103988 -77884946 + AT_rich Low_complexity Low_complexity 1 21 0 202 200 95 42 chr18 8104289 8104384 -77884550 + MIR SINE MIR 17 116 -92 575 299 209 15 chr18 8105370 8105956 -77882978 - L2 LINE L2 0 3313 2594 288 0 0 0 chr18 8106841 8106873 -77882061 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 24 53 0 0 chr18 8108767 8108805 -77880129 + AT_rich Low_complexity Low_complexity 1 38 0 331 270 36 27 chr18 8108992 8109103 -77879831 + MER5B DNA MER1_type 60 171 -7 250 227 40 40 chr18 8109105 8109180 -77879754 + MER5A DNA MER1_type 115 189 0 349 255 180 19 chr18 8110201 8110362 -77878572 + MIR SINE MIR 64 250 -12 2356 95 0 3 chr18 8111184 8111490 -77877444 + AluSg SINE Alu 1 305 -5 289 219 16 0 chr18 8113274 8113338 -77875596 - L1M4 LINE L1 -1298 4848 4784 279 0 0 0 chr18 8114090 8114121 -77874813 + (T)n Simple_repeat Simple_repeat 1 31 0 253 279 15 177 chr18 8114804 8115069 -77873865 - L2 LINE L2 -31 3241 3020 272 245 0 0 chr18 8115793 8115846 -77873088 + MLT1I LTR MaLR 25 77 -332 316 282 58 0 chr18 8115891 8115994 -77872940 + MLT1I LTR MaLR 293 401 -8 515 295 48 80 chr18 8116236 8116487 -77872447 + MIR SINE MIR 1 243 -19 352 164 60 103 chr18 8119764 8119880 -77869054 + L2 LINE L2 3202 3312 -1 1981 152 3 7 chr18 8120140 8120436 -77868498 - AluSx SINE Alu -17 295 1 364 257 211 28 chr18 8120474 8120692 -77868242 + L2 LINE L2 1955 2212 -1102 605 272 141 38 chr18 8120694 8121349 -77867585 + L2 LINE L2 2589 3313 0 23 0 0 0 chr18 8123251 8123274 -77865660 + AT_rich Low_complexity Low_complexity 1 23 0 265 376 48 16 chr18 8123437 8123562 -77865372 + MIR3 SINE MIR 61 189 -19 424 326 56 11 chr18 8124248 8124426 -77864508 + MIR SINE MIR 3 188 -74 523 179 111 34 chr18 8124440 8124557 -77864377 + L2 LINE L2 3188 3313 0 1984 118 0 65 chr18 8124790 8125122 -77863812 - AluSx SINE Alu 0 312 1 318 175 0 0 chr18 8125540 8125597 -77863337 + L2 LINE L2 3257 3313 0 1860 140 50 0 chr18 8126215 8126493 -77862441 + AluSp SINE Alu 1 292 -21 212 208 0 14 chr18 8126637 8126709 -77862225 + (TA)n Simple_repeat Simple_repeat 2 72 0 573 203 68 0 chr18 8126722 8126855 -77862079 - MIR SINE MIR -52 210 69 2254 105 3 3 chr18 8126889 8127193 -77861741 - AluSq SINE Alu -9 304 1 364 322 20 13 chr18 8128111 8128260 -77860674 - MIR SINE MIR -56 206 57 613 287 133 19 chr18 8130177 8130546 -77858388 - L2 LINE L2 -19 3294 2884 1882 132 0 30 chr18 8130866 8131162 -77857772 - AluJb SINE Alu -12 300 14 2134 132 7 0 chr18 8131293 8131596 -77857338 - AluSx SINE Alu -7 305 1 369 0 0 0 chr18 8132623 8132664 -77856270 + (TG)n Simple_repeat Simple_repeat 2 42 0 183 352 35 28 chr18 8132689 8132834 -77856100 + L2 LINE L2 2467 2612 -702 445 270 35 46 chr18 8134072 8134143 -77854791 - MER69A DNA AcHobo -2349 177 107 2140 131 0 28 chr18 8134143 8134463 -77854471 + AluSx SINE Alu 1 311 -1 445 270 35 46 chr18 8134463 8134565 -77854369 - MER69A DNA AcHobo -2419 107 6 277 324 102 0 chr18 8134688 8134796 -77854138 - L2 LINE L2 -4 3268 3150 411 244 0 0 chr18 8135005 8135087 -77853847 + L2 LINE L2 3190 3271 -1 22 56 0 0 chr18 8135700 8135736 -77853198 + AT_rich Low_complexity Low_complexity 1 36 0 2375 84 3 0 chr18 8136584 8136894 -77852040 + AluY SINE Alu 1 311 0 442 317 18 18 chr18 8137055 8137222 -77851712 + MER5A DNA MER1_type 1 167 -22 1298 174 34 30 chr18 8137679 8137944 -77850990 + MER1B DNA MER1_type 56 321 -18 245 91 0 0 chr18 8137980 8138013 -77850921 + MER1B DNA MER1_type 297 329 0 21 0 0 0 chr18 8139200 8139221 -77849713 + AT_rich Low_complexity Low_complexity 1 21 0 1831 102 0 95 chr18 8139221 8139564 -77849370 + AluSx SINE Alu 1 313 0 608 275 85 5 chr18 8139663 8139863 -77849071 - MIR SINE MIR -13 249 34 959 251 76 11 chr18 8140690 8141075 -77847859 - HsTC2 DNA Tc2 0 1900 1282 341 164 14 27 chr18 8141134 8141207 -77847727 - HsTC2 DNA Tc2 -1826 72 1 207 0 0 0 chr18 8141697 8141720 -77847214 + (T)n Simple_repeat Simple_repeat 1 23 0 180 302 104 21 chr18 8141762 8141858 -77847076 - L2 LINE L2 -8 3305 3202 231 36 0 0 chr18 8141947 8141975 -77846959 + (TC)n Simple_repeat Simple_repeat 2 29 0 2687 20 0 3 chr18 8143505 8143804 -77845130 + AluY SINE Alu 2 299 -12 1218 127 0 0 chr18 8143806 8143979 -77844955 + AluSg/x SINE Alu 135 307 -5 21 36 0 0 chr18 8144297 8144325 -77844609 + AT_rich Low_complexity Low_complexity 1 28 0 325 327 57 90 chr18 8145604 8146127 -77842807 + L1M2 LINE L1 749 1254 -5595 226 169 13 52 chr18 8146364 8146441 -77842493 + (CGGG)n Simple_repeat Simple_repeat 3 76 0 24 0 0 0 chr18 8146443 8146467 -77842467 + GC_rich Low_complexity Low_complexity 1 24 0 30 21 0 21 chr18 8147375 8147394 -77841540 + AT_rich Low_complexity Low_complexity 1 19 -28 1629 81 89 4 chr18 8147394 8147641 -77841293 + L1MA2 LINE L1 6037 6304 0 30 21 0 21 chr18 8147641 8147669 -77841265 + AT_rich Low_complexity Low_complexity 19 47 0 543 239 68 68 chr18 8147669 8147891 -77841043 - L1MA9 LINE L1 -30 6282 6061 251 337 66 46 chr18 8148269 8148465 -77840469 - L2 LINE L2 -554 2760 2561 405 0 0 0 chr18 8148575 8148620 -77840314 + (TG)n Simple_repeat Simple_repeat 2 46 0 2258 100 3 7 chr18 8148952 8149262 -77839672 + AluSg1 SINE Alu 1 309 0 187 261 87 76 chr18 8152116 8152208 -77836726 + L3 LINE CR1 623 715 -862 526 289 38 19 chr18 8152310 8152469 -77836465 + MER5A DNA MER1_type 28 189 0 399 323 123 0 chr18 8153238 8153433 -77835501 + L3 LINE CR1 1345 1563 -14 290 105 0 88 chr18 8154077 8154134 -77834800 + MER5B DNA MER1_type 3 54 -124 1908 145 17 0 chr18 8154146 8154435 -77834499 + AluJb SINE Alu 1 294 -18 301 161 81 46 chr18 8154447 8154534 -77834400 + L1MC5 LINE L1 7828 7917 -44 546 279 16 8 chr18 8154555 8154684 -77834250 + MER5B DNA MER1_type 46 175 -3 606 308 20 24 chr18 8155356 8155606 -77833328 - MIR SINE MIR -2 260 12 252 170 21 0 chr18 8155644 8155691 -77833243 + MER116 DNA Mariner 5 52 -28 22 0 0 0 chr18 8155898 8155920 -77833014 + AT_rich Low_complexity Low_complexity 1 22 0 827 232 76 31 chr18 8155939 8156163 -77832771 - MIR SINE MIR -27 235 2 853 235 189 39 chr18 8156330 8157040 -77831894 + L2 LINE L2 2494 3313 0 283 291 51 43 chr18 8158079 8158196 -77830738 + L2 LINE L2 3138 3255 -17 282 278 45 40 chr18 8158218 8158394 -77830540 + L2 LINE L2 2405 2581 -733 470 227 78 16 chr18 8158716 8158844 -77830090 + L2 LINE L2 3178 3313 0 319 239 128 50 chr18 8159408 8159588 -77829346 + MIR SINE MIR 21 214 -48 2059 134 3 7 chr18 8160080 8160386 -77828548 - AluSx SINE Alu -5 307 3 419 259 195 11 chr18 8160716 8160890 -77828044 - MIR SINE MIR 0 262 57 570 253 96 75 chr18 8161256 8161497 -77827437 + MIR SINE MIR 17 262 0 2405 43 0 0 chr18 8163634 8163958 -77824976 - AluY SINE Alu 0 324 1 3542 221 47 14 chr18 8163994 8165000 -77823934 + L1MC4a LINE L1 6198 6359 0 501 309 44 18 chr18 8165097 8165333 -77823601 + MIR SINE MIR 8 252 -10 305 351 146 20 chr18 8165782 8166124 -77822810 - L2 LINE L2 -338 2976 2592 264 280 64 96 chr18 8166382 8166600 -77822334 - L2 LINE L2 -878 2436 2226 204 294 123 44 chr18 8166679 8166907 -77822027 - L2 LINE L2 -1282 2032 1787 213 329 129 21 chr18 8166925 8167065 -77821869 - MIR SINE MIR 0 262 108 250 304 0 22 chr18 8167695 8167787 -77821147 + Charlie2 DNA MER1_type 2 91 -2691 1816 140 0 51 chr18 8167796 8168110 -77820824 + AluSx SINE Alu 1 298 -14 3118 24 7 51 chr18 8168140 8168550 -77820384 - L1PA4 LINE L1 0 6155 5764 6791 25 5 0 chr18 8168550 8169385 -77819549 + L1P LINE L1 3893 4731 -1415 797 62 0 9 chr18 8169387 8169500 -77819434 + (CTATT)n Simple_repeat Simple_repeat 4 115 0 1869 136 7 7 chr18 8169500 8169786 -77819148 - AluSx SINE Alu -24 288 3 246 240 0 0 chr18 8170244 8170294 -77818640 + GA-rich Low_complexity Low_complexity 4 53 0 441 54 0 0 chr18 8170296 8170352 -77818582 + (GGAA)n Simple_repeat Simple_repeat 3 58 0 2021 217 69 14 chr18 8170355 8171023 -77817911 + Charlie2 DNA MER1_type 2157 2861 -1 189 0 0 0 chr18 8171110 8171131 -77817803 + (A)n Simple_repeat Simple_repeat 1 21 0 210 91 0 0 chr18 8173253 8173286 -77815648 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 1258 26 0 7 chr18 8173288 8173441 -77815493 - L1PA5 LINE L1 -3 6151 6000 2009 137 0 13 chr18 8175241 8175547 -77813387 - AluJo SINE Alu -1 311 10 23 0 0 0 chr18 8176419 8176442 -77812492 + AT_rich Low_complexity Low_complexity 1 23 0 1207 92 0 0 chr18 8176596 8176748 -77812186 - AluSg/x SINE Alu -15 297 146 21 0 0 0 chr18 8176748 8176769 -77812165 + AT_rich Low_complexity Low_complexity 1 21 0 728 214 0 8 chr18 8176923 8177054 -77811880 - FLAM_A SINE Alu -3 130 1 243 0 0 0 chr18 8177113 8177140 -77811794 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1691 163 58 19 chr18 8177253 8177614 -77811320 + MER68 LTR ERV1 163 537 -25 243 254 55 100 chr18 8177806 8177916 -77811018 + MIR SINE MIR 38 142 -66 2212 180 29 5 chr18 8177928 8178238 -77810696 + MSTB LTR MaLR 1 325 -101 2290 93 0 0 chr18 8178238 8178529 -77810405 + AluSx SINE Alu 1 291 -21 2212 180 29 5 chr18 8178529 8178630 -77810304 + MSTB LTR MaLR 325 422 -4 185 250 81 81 chr18 8180823 8180959 -77807975 - MIR SINE MIR -3 259 124 714 286 64 64 chr18 8181237 8181803 -77807131 + L1ME3 LINE L1 5293 5858 -304 396 286 87 12 chr18 8182638 8182799 -77806135 - MIR SINE MIR -73 189 17 443 297 0 38 chr18 8182852 8183037 -77805897 + (CATA)n Simple_repeat Simple_repeat 2 179 0 * 454 359 0 0 chr18 8182903 8183070 -77805864 + (CA)n Simple_repeat Simple_repeat 2 168 0 397 244 11 11 chr18 8183087 8183263 -77805671 + (CATATA)n Simple_repeat Simple_repeat 1 176 0 180 268 0 0 chr18 8183286 8183357 -77805577 + (CATATA)n Simple_repeat Simple_repeat 6 76 0 2035 139 3 3 chr18 8184397 8184699 -77804235 + AluJo SINE Alu 1 302 -10 316 349 41 14 chr18 8185301 8185447 -77803487 - MIR3 SINE MIR -12 196 47 2141 87 38 0 chr18 8186495 8186784 -77802150 - AluSp SINE Alu -13 300 1 210 289 72 0 chr18 8187163 8187246 -77801688 + MIR SINE MIR 97 185 -77 181 235 0 0 chr18 8187334 8187368 -77801566 + MIR SINE MIR 224 257 -5 1213 132 6 6 chr18 8188022 8188204 -77800730 - AluSg/x SINE Alu -48 262 81 839 243 58 72 chr18 8188346 8188849 -77800085 + LTR33 LTR ERVL 26 521 0 1910 176 0 16 chr18 8189070 8189382 -77799552 - AluJb SINE Alu 0 312 6 1610 97 112 4 chr18 8189997 8190266 -77798668 + MER44D DNA MER2_type 42 609 0 24 67 0 0 chr18 8191113 8191158 -77797776 + AT_rich Low_complexity Low_complexity 1 45 0 290 205 13 0 chr18 8191161 8191239 -77797695 + (TA)n Simple_repeat Simple_repeat 1 79 0 282 171 62 132 chr18 8191293 8191422 -77797512 - MIR SINE MIR -109 153 34 2332 221 49 25 chr18 8193035 8193251 -77795683 + L1ME1 LINE L1 5442 5651 -515 237 33 0 0 chr18 8193251 8193281 -77795653 + (CA)n Simple_repeat Simple_repeat 1 30 0 2332 221 49 25 chr18 8193281 8193698 -77795236 + L1ME1 LINE L1 5651 6090 -76 24 0 0 0 chr18 8193734 8193758 -77795176 + AT_rich Low_complexity Low_complexity 1 24 0 2152 167 6 6 chr18 8193919 8194284 -77794650 - MLT1A1 LTR MaLR 0 365 1 2170 112 0 0 chr18 8194857 8195142 -77793792 - AluSg SINE Alu -17 293 9 217 366 61 0 chr18 8195692 8195774 -77793160 - MER5B DNA MER1_type -18 160 74 7313 90 11 2 chr18 8195941 8196989 -77791945 - MER11C LTR ERVK -14 1057 1 643 187 53 7 chr18 8198901 8199051 -77789883 - MER5A DNA MER1_type -31 158 2 192 257 88 71 chr18 8199051 8199136 -77789798 - MIR3 SINE MIR -48 160 74 30 0 0 0 chr18 8199540 8199570 -77789364 + AT_rich Low_complexity Low_complexity 1 30 0 616 167 0 18 chr18 8199653 8199767 -77789167 + FLAM_A SINE Alu 28 139 -3 196 348 14 0 chr18 8200693 8200762 -77788172 - MIR SINE MIR -95 113 44 1872 170 32 38 chr18 8200775 8201295 -77787639 + Charlie1 DNA MER1_type 1 2757 -4 280 335 215 11 chr18 8201755 8201946 -77786988 + MIR SINE MIR 23 252 -10 2668 119 29 7 chr18 8202128 8202547 -77786387 + MSTA LTR MaLR 1 428 0 1649 145 48 15 chr18 8205157 8205426 -77783508 - AluJo SINE Alu -29 283 6 1606 147 81 28 chr18 8206288 8206573 -77782361 + AluJo SINE Alu 1 300 -12 363 211 0 0 chr18 8206691 8206781 -77782153 + (CA)n Simple_repeat Simple_repeat 1 90 0 2135 138 7 0 chr18 8207145 8207443 -77781491 - AluSx SINE Alu -12 300 1 1201 261 11 23 chr18 8207574 8207927 -77781007 + LTR16A LTR ERVL 1 349 -101 1302 168 21 139 chr18 8208075 8208414 -77780520 - AluSx SINE Alu -3 299 1 522 57 0 0 chr18 8209572 8209642 -77779292 + (TC)n Simple_repeat Simple_repeat 1 70 0 189 313 112 28 chr18 8209849 8210028 -77778906 - L2 LINE L2 -556 2758 2565 309 335 81 11 chr18 8210663 8210848 -77778086 + MIR SINE MIR 29 226 -36 734 300 29 4 chr18 8213801 8214078 -77774856 + L1PB4 LINE L1 5610 5893 -263 * 2196 158 80 2 chr18 8213837 8214235 -77774699 + L1MB2 LINE L1 5651 6079 -92 1680 142 0 94 chr18 8214330 8214660 -77774274 + AluJo SINE Alu 1 299 -13 427 184 10 39 chr18 8214677 8214780 -77774154 + L1MB2 LINE L1 6072 6171 0 2110 129 10 0 chr18 8215427 8215722 -77773212 - AluSx SINE Alu -13 299 2 2005 202 65 26 chr18 8216220 8216715 -77772219 + Charlie1b DNA MER1_type 5 518 -5 182 337 84 39 chr18 8217220 8217398 -77771536 + L2 LINE L2 1233 1418 -1896 22 0 0 0 chr18 8217469 8217491 -77771443 + AT_rich Low_complexity Low_complexity 1 22 0 444 108 0 0 chr18 8218059 8218124 -77770810 - L1MA1 LINE L1 0 6302 6238 680 142 92 0 chr18 8218125 8218266 -77770668 + L1MA1 LINE L1 6017 6170 -132 248 254 0 17 chr18 8218313 8218372 -77770562 + L2 LINE L2 3203 3260 -12 590 293 113 23 chr18 8219373 8219833 -77769101 - L1ME3A LINE L1 -204 5966 5472 2560 40 0 0 chr18 8220003 8220300 -77768634 - AluYa5 SINE Alu -14 297 1 23 0 0 0 chr18 8222408 8222431 -77766503 + AT_rich Low_complexity Low_complexity 1 23 0 1886 149 0 7 chr18 8224151 8224439 -77764495 + AluJo SINE Alu 14 299 -13 282 315 137 11 chr18 8224962 8225136 -77763798 - MIR SINE MIR -11 251 53 234 0 0 0 chr18 8225633 8225659 -77763275 + (T)n Simple_repeat Simple_repeat 1 26 0 230 288 14 0 chr18 8225754 8225827 -77763107 - MIR SINE MIR -94 168 95 1780 142 7 30 chr18 8226322 8226618 -77762316 - AluSx SINE Alu -3 309 21 1615 170 32 3 chr18 8226691 8226974 -77761960 - AluJo SINE Alu -21 291 1 212 297 144 17 chr18 8228374 8228492 -77760442 - MIR SINE MIR -20 242 110 23 33 0 0 chr18 8229103 8229133 -77759801 + AT_rich Low_complexity Low_complexity 1 30 0 195 239 141 14 chr18 8229320 8229391 -77759543 - MIR SINE MIR -75 187 108 205 323 39 13 chr18 8229577 8229732 -77759202 + L3 LINE CR1 1189 1347 -230 184 319 42 42 chr18 8229939 8230011 -77758923 + L2 LINE L2 3146 3217 -55 273 329 0 0 chr18 8230015 8230094 -77758840 + L3 LINE CR1 1391 1469 -108 239 193 250 11 chr18 8230357 8230445 -77758489 - L2 LINE L2 -13 3300 3192 355 242 130 79 chr18 8231373 8231650 -77757284 + L1M2 LINE L1 556 846 -6003 329 0 24 0 chr18 8232083 8232124 -77756810 + (CA)n Simple_repeat Simple_repeat 2 43 0 312 27 0 0 chr18 8233528 8233565 -77755369 + (CA)n Simple_repeat Simple_repeat 2 38 0 327 315 118 0 chr18 8235411 8235538 -77753396 + MIR SINE MIR 121 262 0 578 144 89 123 chr18 8235663 8235809 -77753125 + FLAM_C SINE Alu 2 142 -1 372 340 83 11 chr18 8235890 8236155 -77752779 - L3 LINE CR1 -200 1377 1094 228 293 0 0 chr18 8236346 8236404 -77752530 + MIR3 SINE MIR 124 181 -27 4831 243 46 57 chr18 8236408 8238005 -77750929 - L1MC4 LINE L1 -3 8039 6460 1007 273 126 35 chr18 8238138 8238379 -77750555 + L2 LINE L2 2359 2577 -736 2137 131 0 0 chr18 8238379 8238676 -77750258 - AluSx SINE Alu -15 297 1 1007 273 126 35 chr18 8238676 8239285 -77749649 + L2 LINE L2 2577 3313 0 308 265 154 8 chr18 8240614 8240731 -77748203 + MIR SINE MIR 64 197 -65 234 128 0 0 chr18 8240838 8240877 -77748057 + (TCC)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr18 8241026 8241047 -77747887 + AT_rich Low_complexity Low_complexity 1 21 0 342 324 157 34 chr18 8242784 8243416 -77745518 + L2 LINE L2 2516 3212 -60 342 277 107 0 chr18 8243450 8243562 -77745372 + MIR SINE MIR 10 133 -129 256 288 65 65 chr18 8243599 8243678 -77745256 + MIR SINE MIR 124 205 -57 1847 162 138 5 chr18 8243678 8244055 -77744879 + MSTA LTR MaLR 1 427 -1 256 288 65 65 chr18 8244055 8244114 -77744820 + MIR SINE MIR 204 262 0 43 85 0 0 chr18 8244220 8244326 -77744608 + AT_rich Low_complexity Low_complexity 1 106 0 868 131 8 0 chr18 8245180 8245302 -77743632 + FLAM_C SINE Alu 1 123 -10 27 0 0 0 chr18 8245729 8245756 -77743178 + AT_rich Low_complexity Low_complexity 1 27 0 490 149 96 0 chr18 8246326 8246420 -77742514 - L1MB3 LINE L1 -2 6181 6079 270 0 0 0 chr18 8246468 8246498 -77742436 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 967 244 40 29 chr18 8247507 8247550 -77741384 - Charlie1 DNA MER1_type 0 2761 2720 2131 185 25 3 chr18 8247550 8247907 -77741027 + MLT1A1 LTR MaLR 1 365 0 967 244 40 29 chr18 8247907 8248210 -77740724 - Charlie1 DNA MER1_type -41 2720 1 207 244 47 105 chr18 8248953 8249039 -77739895 + MIR SINE MIR 63 143 -119 21 0 0 0 chr18 8250451 8250472 -77738462 + AT_rich Low_complexity Low_complexity 1 21 0 2171 121 0 3 chr18 8250586 8250892 -77738042 + AluSx SINE Alu 6 310 -2 437 167 13 0 chr18 8251584 8251662 -77737272 - MADE1 DNA Mariner -1 79 1 501 308 41 19 chr18 8251772 8251989 -77736945 + MIR SINE MIR 12 235 -27 329 215 15 15 chr18 8252335 8252400 -77736534 - MER5A DNA MER1_type -124 65 1 33 0 0 0 chr18 8252874 8252907 -77736027 + AT_rich Low_complexity Low_complexity 1 33 0 6364 145 31 0 chr18 8252927 8253935 -77734999 + Tigger1 DNA MER2_type 1 1039 -1379 1626 182 38 0 chr18 8253950 8254268 -77734666 - L1M4 LINE L1 -979 5167 4838 833 296 96 52 chr18 8254358 8255070 -77733864 - L1ME LINE L1 -5323 747 5 265 309 47 40 chr18 8255969 8256118 -77732816 + MER5B DNA MER1_type 1 150 -28 427 292 65 0 chr18 8258090 8258244 -77730690 + MIR SINE MIR 2 165 -97 465 242 47 8 chr18 8258263 8258391 -77730543 + MIR SINE MIR 108 240 -22 3013 184 32 18 chr18 8258986 8259045 -77729889 - L1MB3 LINE L1 -2 6181 6124 1611 124 42 0 chr18 8259045 8259286 -77729648 - AluSx SINE Alu 0 312 62 3013 184 32 18 chr18 8259286 8259828 -77729106 - L1MB3 LINE L1 -59 6124 5572 2196 111 0 0 chr18 8260562 8260891 -77728043 - AluSx SINE Alu 0 312 1 286 333 61 8 chr18 8262046 8262178 -77726756 - L2 LINE L2 -7 3306 3168 2299 97 7 0 chr18 8262736 8263034 -77725900 + AluSp SINE Alu 1 300 -13 2771 142 73 2 chr18 8263040 8263490 -77725444 - L1MB3 LINE L1 -15 6168 5687 631 172 121 40 chr18 8264572 8264746 -77724188 - MER53 DNA DNA -1 188 1 242 349 61 15 chr18 8266013 8266277 -77722657 + L2 LINE L2 2386 2661 -653 14991 140 41 6 chr18 8268093 8269599 -77719335 - Tigger1 DNA MER2_type 0 2418 798 2265 117 3 0 chr18 8269599 8269907 -77719027 - AluY SINE Alu -2 309 1 14991 140 41 6 chr18 8269907 8270735 -77718199 - Tigger1 DNA MER2_type -1620 798 1 262 292 6 6 chr18 8270892 8271060 -77717874 + (TG)n Simple_repeat Simple_repeat 1 168 0 495 318 15 4 chr18 8271076 8271355 -77717579 + (TG)n Simple_repeat Simple_repeat 1 282 0 189 270 0 0 chr18 8271392 8271481 -77717453 + (TG)n Simple_repeat Simple_repeat 2 90 0 330 318 0 0 chr18 8271503 8271610 -77717324 + (TG)n Simple_repeat Simple_repeat 1 107 0 266 324 10 10 chr18 8271754 8271856 -77717078 + GA-rich Low_complexity Low_complexity 3 104 0 1435 199 57 14 chr18 8272035 8272316 -77716618 + AluJo SINE Alu 1 293 -19 241 341 122 24 chr18 8273803 8273967 -77714967 - MIR SINE MIR -69 193 14 214 213 0 43 chr18 8275090 8275137 -77713797 + (CACG)n Simple_repeat Simple_repeat 2 46 0 202 163 20 20 chr18 8275138 8275187 -77713747 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr18 8275590 8275612 -77713322 + AT_rich Low_complexity Low_complexity 1 22 0 914 171 50 17 chr18 8275843 8276024 -77712910 - L1PB4 LINE L1 -181 5985 5799 543 232 6 58 chr18 8276024 8276198 -77712736 + L1PB4 LINE L1 6002 6166 0 2672 171 13 4 chr18 8276262 8276735 -77712199 + MER41B LTR ERV1 132 608 -27 507 214 10 0 chr18 8278089 8278187 -77710747 + MER5A DNA MER1_type 14 112 -77 270 111 0 0 chr18 8278827 8278863 -77710071 - tRNA-Asp-GAC tRNA tRNA -39 36 1 2981 214 21 30 chr18 8278863 8279572 -77709362 + L1MA9 LINE L1 5585 6287 -25 553 279 78 27 chr18 8279710 8279968 -77708966 + MLT1J2 LTR MaLR 1 271 -179 1102 179 74 0 chr18 8279993 8280183 -77708751 + MER20 DNA MER1_type 16 219 0 356 282 129 6 chr18 8280183 8280352 -77708582 + MLT1J2 LTR MaLR 257 446 -4 191 258 108 32 chr18 8280934 8281027 -77707907 - MIR SINE MIR -70 138 39 545 319 37 11 chr18 8282761 8282949 -77705985 + MIR SINE MIR 56 248 -14 456 325 131 45 chr18 8283019 8283286 -77705648 + L2 LINE L2 2515 2832 -482 3204 92 18 22 chr18 8283286 8283732 -77705202 - MLT2A1 LTR ERVL 0 444 1 456 325 131 45 chr18 8283732 8283885 -77705049 + L2 LINE L2 2832 2971 -343 4457 20 0 6 chr18 8283920 8284432 -77704502 - L1PA3 LINE L1 0 6155 5668 21689 34 0 0 chr18 8284532 8287120 -77701814 - L1PA3 LINE L1 -781 5365 2778 26134 40 41 2 chr18 8287120 8290342 -77698592 + L1P LINE L1 2 3347 -2799 10008 36 0 4 chr18 8290335 8291543 -77697391 - L1PA3 LINE L1 -3351 2795 1593 * 10044 140 10 28 chr18 8291599 8293628 -77695306 - L1PA11 LINE L1 -3 6171 4177 1917 110 0 4 chr18 8293628 8293883 -77695051 - AluSx SINE Alu -30 282 29 10044 140 10 28 chr18 8293883 8294305 -77694629 - L1PA11 LINE L1 -1997 4177 3749 252 196 59 0 chr18 8294330 8294381 -77694553 + MER116 DNA Mariner 5 58 -22 275 301 0 0 chr18 8294510 8294583 -77694351 + L2 LINE L2 3184 3256 -57 393 309 103 0 chr18 8294741 8294877 -77694057 + MER117 DNA MER1_type 1 150 -47 2071 101 56 0 chr18 8295139 8295425 -77693509 + AluSx SINE Alu 1 302 -10 2305 110 0 3 chr18 8295645 8295954 -77692980 + AluSg SINE Alu 1 308 -2 219 264 0 30 chr18 8296917 8296996 -77691938 + GA-rich Low_complexity Low_complexity 4 125 0 765 172 9 0 chr18 8298112 8298228 -77690706 - FLAM_C SINE Alu -16 117 1 241 259 0 35 chr18 8298228 8298303 -77690631 - L1ME4a LINE L1 -81 6109 6036 465 213 17 0 chr18 8298358 8298532 -77690402 + (TA)n Simple_repeat Simple_repeat 2 178 0 279 0 0 0 chr18 8298532 8298563 -77690371 + (GA)n Simple_repeat Simple_repeat 2 32 0 805 322 51 29 chr18 8298758 8298946 -77689988 - L1M4 LINE L1 -1050 5096 4914 3897 133 4 8 chr18 8298946 8299474 -77689460 + MER1A DNA MER1_type 2 527 0 805 322 51 29 chr18 8299474 8299869 -77689065 - L1M4 LINE L1 -1232 4914 4500 22 0 0 0 chr18 8299931 8299953 -77688981 + AT_rich Low_complexity Low_complexity 1 22 0 206 219 0 0 chr18 8300058 8300099 -77688835 + (TCTA)n Simple_repeat Simple_repeat 2 42 0 225 250 13 26 chr18 8300189 8300265 -77688669 + L1ME2 LINE L1 5904 5978 -186 * 2205 222 36 28 chr18 8300254 8300861 -77688073 - L1ME4a LINE L1 -236 5997 5386 354 276 140 23 chr18 8300878 8301186 -77687748 - L1ME4a LINE L1 -4772 1624 1281 239 253 152 42 chr18 8301196 8301552 -77687382 - L1M4 LINE L1 -3608 2538 2144 2843 68 6 11 chr18 8301559 8301924 -77687010 - L1PA8 LINE L1 -6 6166 5804 308 279 115 10 chr18 8303084 8303188 -77685746 + L2 LINE L2 3190 3304 -9 357 343 23 17 chr18 8303219 8303394 -77685540 - L1MC/D LINE L1 -2256 5552 5377 23 54 0 0 chr18 8303442 8303479 -77685455 + AT_rich Low_complexity Low_complexity 1 37 0 613 135 0 0 chr18 8303479 8303583 -77685351 - L1MA7 LINE L1 -2 6289 6186 302 214 83 0 chr18 8303587 8303671 -77685263 - L1MC/D LINE L1 -1002 5357 5267 278 283 202 0 chr18 8304002 8304101 -77684833 - MIR SINE MIR -122 140 22 2090 100 18 0 chr18 8304343 8304695 -77684239 + AluSq SINE Alu 1 357 0 251 274 65 0 chr18 8305706 8305768 -77683166 - MIR SINE MIR -84 124 59 2435 76 0 0 chr18 8306660 8306963 -77681971 - AluY SINE Alu -8 303 1 664 191 132 0 chr18 8307023 8307175 -77681759 - MER5A DNA MER1_type -11 178 7 646 285 153 6 chr18 8307221 8307561 -77681373 - LTR16C LTR ERVL 0 491 102 314 239 11 0 chr18 8307996 8308088 -77680846 + (CA)n Simple_repeat Simple_repeat 2 94 0 455 309 23 23 chr18 8308302 8308477 -77680457 + MIR SINE MIR 16 190 -72 212 367 0 0 chr18 8308534 8308613 -77680321 + MIR SINE MIR 165 243 -19 2185 236 68 21 chr18 8309523 8310145 -77678789 - L1ME3 LINE L1 -8 6154 5504 195 263 53 0 chr18 8310281 8310338 -77678596 - MIR SINE MIR -87 175 116 504 335 60 9 chr18 8311066 8311281 -77677653 - MIR SINE MIR -34 228 3 697 283 117 49 chr18 8313829 8314136 -77674798 - MLT1I LTR MaLR -9 400 73 518 323 36 5 chr18 8314215 8314407 -77674527 + MIR SINE MIR 59 256 -6 388 305 249 24 chr18 8314794 8315207 -77673727 - L2 LINE L2 -4 3309 2804 22 0 0 0 chr18 8316099 8316121 -77672813 + AT_rich Low_complexity Low_complexity 1 22 0 2193 232 102 61 chr18 8316722 8317564 -77671370 - L1ME2 LINE L1 -9 6155 5253 2771 129 24 2 chr18 8317564 8317621 -77671313 + L1PB3 LINE L1 5726 5780 -374 438 20 0 0 chr18 8317621 8317672 -77671262 + (CA)n Simple_repeat Simple_repeat 2 52 0 2771 129 24 2 chr18 8317672 8318031 -77670903 + L1PB3 LINE L1 5780 6151 -3 2193 232 102 61 chr18 8318031 8318436 -77670498 - L1ME2 LINE L1 -911 5253 4866 297 222 0 123 chr18 8319376 8319457 -77669477 + MER91B DNA MER1_type 1 71 -119 327 341 168 0 chr18 8319483 8319650 -77669284 - MIR SINE MIR -33 229 35 341 244 238 0 chr18 8320133 8320293 -77668641 + MIR SINE MIR 50 247 -15 209 195 0 0 chr18 8321988 8322029 -77666905 + (TCTA)n Simple_repeat Simple_repeat 1 41 0 187 222 44 0 chr18 8322959 8323004 -77665930 + L2 LINE L2 3222 3268 -4 * 237 276 102 47 chr18 8323003 8323130 -77665804 - L2 LINE L2 -36 3236 3103 1728 169 10 13 chr18 8323286 8323593 -77665341 - AluJo SINE Alu -6 306 1 252 241 0 0 chr18 8325686 8325740 -77663194 + L1MC4 LINE L1 6649 6702 -1340 * 270 242 32 21 chr18 8325716 8325811 -77663123 - L1MC4 LINE L1 -1340 6702 6607 323 305 47 23 chr18 8327221 8327349 -77661585 - MIR3 SINE MIR -77 131 1 869 199 80 35 chr18 8327748 8327949 -77660985 - MER63A DNA MER1_type 0 210 1 201 147 0 0 chr18 8328056 8328090 -77660844 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 1252 237 22 16 chr18 8329014 8329330 -77659604 + L1ME3A LINE L1 5848 6165 -5 260 343 80 42 chr18 8331275 8331675 -77657259 + L2 LINE L2 2883 3297 -16 22 0 0 0 chr18 8331916 8331938 -77656996 + AT_rich Low_complexity Low_complexity 1 22 0 1067 149 88 10 chr18 8331946 8332140 -77656794 - L1PA16 LINE L1 -1 6165 5957 819 173 0 0 chr18 8333059 8333186 -77655748 - FLAM_A SINE Alu -6 127 1 2455 69 10 0 chr18 8333933 8334236 -77654698 - AluY SINE Alu -5 306 1 21 0 0 0 chr18 8334236 8334257 -77654677 + AT_rich Low_complexity Low_complexity 1 21 0 378 326 0 17 chr18 8334734 8334915 -77654019 + (TG)n Simple_repeat Simple_repeat 2 179 0 325 248 12 0 chr18 8334930 8335091 -77653843 + (TG)n Simple_repeat Simple_repeat 2 164 0 508 296 72 9 chr18 8335456 8335679 -77653255 - MIR SINE MIR -13 249 13 3652 167 32 11 chr18 8336613 8337259 -77651675 + L1PB4 LINE L1 5494 6153 -3 1607 246 78 79 chr18 8337686 8338334 -77650600 - HAL1 LINE L1 -99 2408 1760 2844 153 7 16 chr18 8338334 8338772 -77650162 + Tigger2a DNA MER2_type 1 434 0 1607 246 78 79 chr18 8338772 8338981 -77649953 - HAL1 LINE L1 -747 1760 1552 974 276 76 80 chr18 8338969 8339705 -77649229 - HAL1 LINE L1 -1770 737 5 * 204 237 17 17 chr18 8339975 8340034 -77648900 + CT-rich Low_complexity Low_complexity 3 61 0 222 316 26 13 chr18 8340053 8340129 -77648805 - L2 LINE L2 -27 3245 3169 186 227 336 27 chr18 8340365 8340475 -77648459 - MIR SINE MIR -55 207 64 230 261 0 62 chr18 8340609 8340674 -77648260 + L2 LINE L2 3235 3295 -18 198 384 55 0 chr18 8340687 8340760 -77648174 - MIR SINE MIR -185 77 1 231 241 124 56 chr18 8341441 8341578 -77647356 + MIR SINE MIR 35 145 -63 268 259 43 9 chr18 8343612 8343728 -77645206 - L1ME4a LINE L1 -42 6079 5960 1531 203 0 26 chr18 8345963 8346273 -77642661 + AluJo SINE Alu 7 308 -4 299 277 160 16 chr18 8346289 8346477 -77642457 + L2 LINE L2 2572 2786 -528 523 268 71 117 chr18 8346585 8347094 -77641840 + L2 LINE L2 2790 3272 0 1091 246 104 9 chr18 8347221 8347538 -77641396 - MLT1I LTR MaLR 0 409 63 2151 114 3 7 chr18 8348718 8349016 -77639918 - AluSx SINE Alu -9 303 7 1007 241 42 0 chr18 8350100 8350312 -77638622 - MER58A DNA MER1_type -3 221 1 615 222 153 32 chr18 8350316 8350532 -77638402 + MIR SINE MIR 21 262 0 253 139 0 23 chr18 8350825 8350868 -77638066 + LTR23 LTR ERV1 320 361 -76 24 0 0 0 chr18 8350868 8350892 -77638042 + AT_rich Low_complexity Low_complexity 1 24 0 2052 252 104 25 chr18 8351045 8351593 -77637341 + MLT1E LTR MaLR 3 593 0 400 252 171 0 chr18 8354742 8354853 -77634081 + L2 LINE L2 3180 3309 -4 4408 260 70 65 chr18 8355409 8356094 -77632840 - HAL1 LINE L1 -258 2249 1569 1720 148 7 28 chr18 8356094 8356378 -77632556 - AluJb SINE Alu -32 280 3 4408 260 70 65 chr18 8356378 8357057 -77631877 - HAL1 LINE L1 -938 1569 895 2108 177 112 26 chr18 8357057 8357301 -77631633 - MLT1C LTR MaLR 0 467 245 1851 135 14 17 chr18 8357301 8357598 -77631336 - AluSx SINE Alu -16 296 1 2108 177 112 26 chr18 8357598 8357783 -77631151 - MLT1C LTR MaLR -222 245 1 4408 260 70 65 chr18 8357783 8358651 -77630283 - HAL1 LINE L1 -1612 895 4 410 324 149 26 chr18 8358800 8359149 -77629785 + L2 LINE L2 2870 3261 -11 298 250 16 19 chr18 8359834 8359970 -77628964 - MIR SINE MIR -8 254 81 192 297 162 0 chr18 8361433 8361507 -77627427 - MIR SINE MIR -66 142 57 358 267 87 47 chr18 8361905 8362055 -77626879 - MIR SINE MIR -77 185 30 184 219 0 24 chr18 8362216 8362257 -77626677 + L2 LINE L2 3213 3252 -20 192 318 63 0 chr18 8362303 8362366 -77626568 - L2 LINE L2 -74 3198 3132 423 195 30 150 chr18 8362393 8362593 -77626341 + MER5B DNA MER1_type 1 176 -2 263 257 36 71 chr18 8363121 8363261 -77625673 - MER5A DNA MER1_type 0 189 55 270 278 96 35 chr18 8364240 8364355 -77624579 + L2 LINE L2 3182 3303 -10 530 275 97 76 chr18 8365176 8365609 -77623325 - LTR67 LTR ERVL -1 556 115 303 347 53 22 chr18 8365695 8366015 -77622919 + L2 LINE L2 552 881 -2433 239 318 19 9 chr18 8366365 8366472 -77622462 + L2 LINE L2 1313 1420 -1894 1833 166 7 0 chr18 8367352 8367630 -77621304 + AluJo SINE Alu 1 280 -32 32 0 0 0 chr18 8367642 8367674 -77621260 + AT_rich Low_complexity Low_complexity 1 32 0 626 203 24 0 chr18 8368841 8368964 -77619970 + FLAM_C SINE Alu 2 127 -6 415 343 36 7 chr18 8369425 8369702 -77619232 + L2 LINE L2 2483 2767 -547 421 222 182 0 chr18 8370086 8370238 -77618696 + MER5A DNA MER1_type 4 187 -2 246 269 77 0 chr18 8370247 8370325 -77618609 + L2 LINE L2 3197 3280 -33 1585 120 94 11 chr18 8370352 8370618 -77618316 + MER72 LTR ERV1 435 722 0 269 284 13 54 chr18 8370774 8370945 -77617989 + MIR SINE MIR 49 212 -50 199 291 90 30 chr18 8371486 8371620 -77617314 - L3b LINE CR1 -149 1434 1293 400 275 43 29 chr18 8372018 8372156 -77616778 + MIR SINE MIR 123 262 0 207 244 49 71 chr18 8372542 8372631 -77616303 - MIR SINE MIR -66 142 81 180 0 0 0 chr18 8373085 8373105 -77615829 + (TTCCC)n Simple_repeat Simple_repeat 5 24 0 2939 150 96 14 chr18 8373155 8373668 -77615266 - MER21A LTR ERV1 -1 930 376 1444 125 73 8 chr18 8373673 8373921 -77615013 - MER21A LTR ERV1 -667 264 1 2219 121 10 0 chr18 8376091 8376398 -77612536 - AluSx SINE Alu -2 310 1 390 287 56 0 chr18 8376398 8376541 -77612393 + L1MC5 LINE L1 7292 7442 -519 29 47 0 0 chr18 8376863 8376906 -77612028 + AT_rich Low_complexity Low_complexity 1 43 0 374 194 0 0 chr18 8377121 8377193 -77611741 - L1MB7 LINE L1 -1 6183 6112 1494 71 81 0 chr18 8377193 8377401 -77611533 + L1PA11 LINE L1 5948 6174 0 8452 211 52 17 chr18 8377401 8380419 -77608515 - L1MB7 LINE L1 -57 6127 3002 344 204 51 31 chr18 8380549 8380647 -77608287 - MIR3 SINE MIR -26 182 83 4036 133 7 2 chr18 8381084 8381703 -77607231 + L1MA2 LINE L1 5485 6106 -198 301 210 8 8 chr18 8381703 8381827 -77607107 + (TA)n Simple_repeat Simple_repeat 1 124 0 1239 84 30 45 chr18 8381834 8382036 -77606898 + L1MA2 LINE L1 6106 6304 0 935 174 11 6 chr18 8433715 8433893 -77555041 + L1PB4 LINE L1 5978 6156 0 2201 108 0 0 chr18 8434032 8434319 -77554615 + AluSx SINE Alu 1 287 -25 186 133 0 0 chr18 8436664 8436694 -77552240 + (TTA)n Simple_repeat Simple_repeat 3 32 0 25 75 0 0 chr18 8437239 8437292 -77551642 + AT_rich Low_complexity Low_complexity 1 53 0 196 367 0 11 chr18 8438261 8438351 -77550583 + L2 LINE L2 2932 3020 -252 25 31 0 0 chr18 8438868 8438900 -77550034 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr18 8438963 8438991 -77549943 + AT_rich Low_complexity Low_complexity 1 28 0 467 286 33 44 chr18 8440589 8440771 -77548163 - MIR SINE MIR 0 262 83 773 267 11 11 chr18 8440893 8441084 -77547850 - MIR SINE MIR -6 256 66 289 365 43 9 chr18 8441138 8441253 -77547681 + MIR3 SINE MIR 60 178 -30 705 299 37 5 chr18 8441500 8441717 -77547217 + MIR SINE MIR 39 262 0 336 256 25 91 chr18 8442507 8442628 -77546306 - MIR SINE MIR -141 121 9 372 278 42 112 chr18 8442661 8442920 -77546014 - MIR SINE MIR -1 261 21 22 35 0 0 chr18 8443401 8443430 -77545504 + AT_rich Low_complexity Low_complexity 1 29 0 189 278 28 42 chr18 8445282 8445354 -77543580 + L3 LINE CR1 404 474 -1103 189 0 0 0 chr18 8445630 8445651 -77543283 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 555 213 84 26 chr18 8448613 8448768 -77540166 + MIR SINE MIR 97 260 -2 467 181 11 0 chr18 8449349 8449443 -77539491 + MER53 DNA DNA 95 189 0 665 300 69 36 chr18 8450676 8451009 -77537925 - L2 LINE L2 -2 3311 2968 501 298 146 0 chr18 8451331 8451489 -77537445 + MER5A DNA MER1_type 9 189 0 297 356 87 0 chr18 8451829 8451978 -77536956 + MIR SINE MIR 31 192 -70 209 345 0 0 chr18 8452238 8452296 -77536638 - L2 LINE L2 -16 3256 3199 222 37 0 0 chr18 8452947 8452974 -77535960 + (CA)n Simple_repeat Simple_repeat 2 28 0 312 244 51 0 chr18 8456277 8456355 -77532579 + L2 LINE L2 3191 3272 -41 2078 202 16 52 chr18 8456616 8457192 -77531742 + L1MB7 LINE L1 5614 6169 -15 273 80 0 40 chr18 8457345 8457395 -77531539 + L1MC4 LINE L1 7017 7064 -978 1248 231 161 39 chr18 8457403 8457888 -77531046 + MER101B LTR ERV1 8 551 -19 1265 225 50 4 chr18 8457928 8458419 -77530515 + L1ME LINE L1 4964 5480 -743 501 283 17 8 chr18 8458419 8458539 -77530395 - MIR SINE MIR -139 123 3 241 225 47 128 chr18 8458547 8458743 -77530191 + L1ME LINE L1 5649 5821 -300 898 235 18 23 chr18 8458743 8458964 -77529970 - MER58A DNA MER1_type -4 220 1 241 225 47 128 chr18 8458964 8459025 -77529909 + L1ME LINE L1 5821 5885 -236 1790 121 180 32 chr18 8460136 8460509 -77528425 + MSTA LTR MaLR 1 428 0 4476 140 11 3 chr18 8460596 8461311 -77527623 - LTR39 LTR ERV1 0 783 63 254 276 46 11 chr18 8462463 8462550 -77526384 - MIR SINE MIR -70 192 103 812 183 14 0 chr18 8463122 8463264 -77525670 - MER5A DNA MER1_type 0 189 46 1740 176 39 17 chr18 8463267 8463626 -77525308 + MER58D DNA MER1_type 20 386 0 214 135 54 0 chr18 8463632 8463669 -77525265 - MER5A DNA MER1_type -148 41 3 435 306 63 39 chr18 8464617 8464872 -77524062 + MIR SINE MIR 2 262 0 426 286 27 0 chr18 8464955 8465067 -77523867 - L2 LINE L2 0 3272 3158 453 265 197 0 chr18 8466372 8466519 -77522415 + MER5A DNA MER1_type 14 189 0 1008 145 0 0 chr18 8466550 8466709 -77522225 - FRAM SINE Alu -24 152 1 2136 104 0 42 chr18 8467024 8467331 -77521603 + AluSq SINE Alu 1 294 -19 1136 297 100 37 chr18 8467414 8468148 -77520786 + L2 LINE L2 2272 3054 -259 237 193 88 18 chr18 8468214 8468271 -77520663 + L2 LINE L2 3206 3266 -47 629 186 119 115 chr18 8468869 8469164 -77519770 + MLT1D LTR MaLR 1 296 -209 310 93 0 0 chr18 8469180 8469228 -77519706 - FLAM_A SINE Alu -71 61 22 576 188 42 0 chr18 8469228 8469324 -77519610 + AluJb SINE Alu 196 295 -17 647 259 51 9 chr18 8469920 8470136 -77518798 + L2 LINE L2 2549 2773 -541 1769 193 16 25 chr18 8470160 8470523 -77518411 + MLT1A1 LTR MaLR 1 360 -5 456 277 178 0 chr18 8470523 8470753 -77518181 + L2 LINE L2 2788 3066 -247 510 31 0 0 chr18 8473375 8473439 -77515495 + (TC)n Simple_repeat Simple_repeat 1 64 0 180 111 0 0 chr18 8473438 8473465 -77515469 + (CA)n Simple_repeat Simple_repeat 1 27 0 * 2444 86 0 0 chr18 8473609 8473913 -77515021 + AluY SINE Alu 1 304 -7 410 358 39 19 chr18 8474397 8474604 -77514330 - MIR SINE MIR -13 249 39 2462 124 60 2 chr18 8475229 8475624 -77513310 - MSTA LTR MaLR 0 428 2 437 304 61 43 chr18 8475749 8475979 -77512955 + MIR SINE MIR 29 262 0 769 215 0 0 chr18 8476082 8476212 -77512722 + FLAM_A SINE Alu 4 133 0 724 272 42 56 chr18 8476884 8477311 -77511623 + L1MEc LINE L1 903 1323 -4882 1363 212 78 10 chr18 8477439 8477746 -77511188 + L1ME1 LINE L1 5683 6010 -156 226 118 0 0 chr18 8477754 8477788 -77511146 + MER3 DNA MER1_type 12 45 -164 344 242 84 39 chr18 8477858 8478072 -77510862 + L1MEc LINE L1 1540 1741 -860 1223 198 45 4 chr18 8478268 8478510 -77510424 + L1MD2 LINE L1 6095 6346 -13 315 237 82 52 chr18 8478722 8478916 -77510018 + L1MEc LINE L1 2247 2446 -3769 2133 159 33 17 chr18 8479439 8479798 -77509136 + MLT1A1 LTR MaLR 1 365 0 303 93 0 0 chr18 8480277 8480320 -77508614 + (CA)n Simple_repeat Simple_repeat 1 43 0 1070 231 14 5 chr18 8480965 8481173 -77507761 - MER63A DNA MER1_type 0 210 1 207 0 0 0 chr18 8481767 8481790 -77507144 + (CA)n Simple_repeat Simple_repeat 2 24 0 302 268 36 43 chr18 8483388 8483526 -77505408 + MIR SINE MIR 69 205 -57 2087 131 0 0 chr18 8483656 8483975 -77504959 - AluSx SINE Alu 0 319 1 2225 105 0 0 chr18 8485530 8485816 -77503118 + AluSg SINE Alu 1 286 -24 272 235 47 0 chr18 8485816 8485901 -77503033 + L1MC4 LINE L1 6615 6703 -1339 431 256 12 44 chr18 8486507 8486667 -77502267 - L1ME4a LINE L1 -11 6110 5956 333 315 35 20 chr18 8486718 8486915 -77502019 - L1ME4a LINE L1 -284 5837 5638 2316 132 9 18 chr18 8487438 8487778 -77501156 + MER1B DNA MER1_type 1 337 0 243 349 63 50 chr18 8487807 8488332 -77500602 - L2 LINE L2 -556 2758 2227 851 83 0 0 chr18 8489162 8489271 -77499663 + AluSq/x SINE Alu 1 109 -203 1950 241 55 33 chr18 8489375 8489572 -77499362 - L1MEc LINE L1 -1968 4247 4056 633 156 25 0 chr18 8489572 8489694 -77499240 - L1MB7 LINE L1 0 6184 6060 1950 241 55 33 chr18 8489694 8489714 -77499220 - L1MEc LINE L1 -2159 4056 4038 1164 155 0 15 chr18 8489714 8489914 -77499020 - L1PB1 LINE L1 -1 6150 5954 1950 241 55 33 chr18 8489914 8490334 -77498600 - L1MEc LINE L1 -2177 4038 3595 650 268 163 68 chr18 8491543 8492603 -77496331 + HAL1 LINE L1 733 1893 -614 225 108 0 0 chr18 8493088 8493125 -77495809 + (TG)n Simple_repeat Simple_repeat 2 38 0 361 152 68 47 chr18 8494184 8494422 -77494512 + (CTATA)n Simple_repeat Simple_repeat 1 242 0 205 189 0 0 chr18 8494422 8494459 -77494475 + (TACTG)n Simple_repeat Simple_repeat 4 40 0 348 148 0 0 chr18 8494571 8494632 -77494302 + (CA)n Simple_repeat Simple_repeat 2 62 0 653 333 144 26 chr18 8496537 8497447 -77491487 + L2 LINE L2 2246 3272 0 1046 203 24 24 chr18 8497802 8498014 -77490920 + AluJo SINE Alu 6 217 -95 262 214 157 14 chr18 8498921 8498991 -77489943 + L2 LINE L2 3138 3217 -55 2404 74 3 0 chr18 8499076 8499372 -77489562 + AluY SINE Alu 1 297 -14 312 91 0 0 chr18 8499480 8499524 -77489410 + (TA)n Simple_repeat Simple_repeat 2 45 0 2049 86 0 80 chr18 8499524 8499861 -77489073 - AluY SINE Alu -1 310 1 821 229 40 8 chr18 8499867 8500116 -77488818 - L1MEc LINE L1 -3111 3104 2848 276 301 117 20 chr18 8500143 8500535 -77488399 - L1MEc LINE L1 -3540 2675 2246 261 180 0 0 chr18 8500535 8500585 -77488349 + CT-rich Low_complexity Low_complexity 4 53 0 888 238 18 6 chr18 8500591 8500940 -77487994 - AluJb SINE Alu 0 484 134 908 281 64 96 chr18 8500945 8501018 -77487916 - L1MEc LINE L1 -4105 2291 2217 2004 143 10 7 chr18 8501018 8501318 -77487616 - AluSx SINE Alu -11 301 1 908 281 64 96 chr18 8501318 8502386 -77486548 - L1MEc LINE L1 -4179 2217 1211 1838 161 14 0 chr18 8502386 8502677 -77486257 - AluSx SINE Alu -12 300 6 908 281 64 96 chr18 8502677 8503090 -77485844 - L1MEc LINE L1 -5185 1211 786 1922 146 3 3 chr18 8503485 8503773 -77485161 - AluJb SINE Alu -24 288 1 313 276 106 29 chr18 8503882 8504052 -77484882 - L1MEc LINE L1 -6121 275 93 963 228 28 0 chr18 8504131 8504311 -77484623 - MER5A DNA MER1_type -3 186 2 22 35 0 0 chr18 8504527 8504556 -77484378 + AT_rich Low_complexity Low_complexity 1 29 0 1210 166 62 24 chr18 8505247 8505536 -77483398 - L1 LINE L1 -2368 3778 3479 23 33 0 0 chr18 8505554 8505584 -77483350 + AT_rich Low_complexity Low_complexity 1 30 0 3234 46 0 0 chr18 8505904 8506299 -77482635 + L1P LINE L1 3736 4130 -2016 634 291 44 5 chr18 8506400 8506606 -77482328 - L1ME3A LINE L1 -331 5839 5626 423 56 0 0 chr18 8507298 8507352 -77481582 + (TG)n Simple_repeat Simple_repeat 2 55 0 7894 112 16 2 chr18 8509113 8510213 -77478721 + THE1-int LTR MaLR 7 1121 -459 496 279 6 17 chr18 8510774 8510946 -77477988 + L1ME3A LINE L1 5782 5951 -219 240 256 73 12 chr18 8511033 8511115 -77477819 + L1ME3A LINE L1 6009 6095 -75 1600 191 0 13 chr18 8511244 8511547 -77477387 + AluSx SINE Alu 3 301 -11 1994 140 18 20 chr18 8513428 8513771 -77475163 - MER1A DNA MER1_type -185 344 3 276 217 17 17 chr18 8515138 8515198 -77473736 - MER5B DNA MER1_type -6 172 113 184 336 75 8 chr18 8515235 8515369 -77473565 - L2 LINE L2 -1145 2169 2027 356 252 209 0 chr18 8515858 8515973 -77472961 - MER5A DNA MER1_type -10 179 41 1701 242 115 11 chr18 8516392 8517222 -77471712 + L1ME3A LINE L1 5170 6079 -91 800 229 17 17 chr18 8517482 8517717 -77471217 - AluJb SINE Alu 0 368 134 531 266 64 97 chr18 8517722 8517795 -77471139 - L1MEc LINE L1 -4105 2616 2542 1995 157 3 7 chr18 8517795 8518095 -77470839 - AluSx SINE Alu -13 299 1 531 266 64 97 chr18 8518095 8518288 -77470646 - L1MEc LINE L1 -4179 2542 2359 1601 162 6 67 chr18 8518354 8518668 -77470266 - AluJo SINE Alu -15 297 3 726 276 98 52 chr18 8518698 8519426 -77469508 - L1MEc LINE L1 -4586 1995 1194 1600 263 26 41 chr18 8519431 8520012 -77468922 + L1PBa LINE L1 719 1290 -5573 589 202 8 8 chr18 8521646 8521770 -77467164 + MER3 DNA MER1_type 2 125 -84 225 0 0 0 chr18 8521820 8521845 -77467089 + (CA)n Simple_repeat Simple_repeat 1 25 0 183 80 0 0 chr18 8521981 8522006 -77466928 + (TCCCC)n Simple_repeat Simple_repeat 2 26 0 2606 119 18 39 chr18 8522097 8522460 -77466474 + MER50 LTR ERV1 8 377 -357 2656 93 3 3 chr18 8522460 8522815 -77466119 - THE1A LTR MaLR 0 355 1 12112 87 12 0 chr18 8522815 8524373 -77464561 - THE1A-int LTR MaLR 0 1580 4 2826 67 3 6 chr18 8524377 8524733 -77464201 - THE1A LTR MaLR 0 355 1 2606 119 18 39 chr18 8524733 8524799 -77464135 + MER50 LTR ERV1 379 434 -300 2288 100 24 28 chr18 8524804 8525363 -77463571 + MER51A LTR ERV1 6 633 -1 1389 189 10 20 chr18 8525369 8525666 -77463268 + MER50 LTR ERV1 436 729 -5 23 0 0 0 chr18 8526925 8526948 -77461986 + AT_rich Low_complexity Low_complexity 1 23 0 2292 92 3 0 chr18 8527040 8527323 -77461611 - AluSx SINE Alu -13 299 16 2149 103 45 0 chr18 8529635 8529926 -77459008 - AluSc SINE Alu -5 304 1 578 192 56 16 chr18 8530003 8530128 -77458806 + Charlie1 DNA MER1_type 1 130 -2631 1953 139 19 19 chr18 8530245 8530554 -77458380 - AluSx SINE Alu -3 309 1 317 316 81 21 chr18 8530555 8530789 -77458145 + L2 LINE L2 2594 2841 -473 2263 117 0 0 chr18 8530831 8531131 -77457803 - AluSx SINE Alu -8 304 5 2111 111 3 14 chr18 8531143 8531453 -77457481 - AluSp SINE Alu 0 307 1 2217 79 14 3 chr18 8531471 8531761 -77457173 - AluSx SINE Alu -19 293 1 1603 120 17 0 chr18 8532474 8532707 -77456227 + AluSx SINE Alu 63 299 -13 378 299 14 7 chr18 8532731 8532893 -77456041 - L1MDa LINE L1 -4916 1299 1155 724 264 0 21 chr18 8532900 8533093 -77455841 - AluJo SINE Alu -2 310 122 595 209 12 18 chr18 8533094 8533257 -77455677 - L1MDa LINE L1 -5241 1155 994 1248 245 76 30 chr18 8533270 8533434 -77455500 - L1MDa LINE L1 -5495 901 746 2376 84 10 3 chr18 8533434 8533742 -77455192 - AluY SINE Alu -1 310 1 1248 245 76 30 chr18 8533742 8534013 -77454921 - L1MDa LINE L1 -5650 746 446 396 196 265 0 chr18 8534079 8534181 -77454753 + MER3 DNA MER1_type 81 209 0 280 184 0 0 chr18 8534138 8534187 -77454747 - MER3 DNA MER1_type -119 90 42 * 794 262 65 38 chr18 8534187 8534527 -77454407 - L1MDa LINE L1 -5987 409 61 2234 114 0 0 chr18 8534745 8535052 -77453882 + AluSx SINE Alu 1 307 -5 180 111 0 0 chr18 8536144 8536171 -77452763 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 475 195 0 0 chr18 8538601 8538678 -77450256 + MER91B DNA MER1_type 1 77 -113 1983 170 0 0 chr18 8539521 8539815 -77449119 - AluJo SINE Alu -13 299 6 2198 102 0 3 chr18 8539939 8540250 -77448684 - AluSg SINE Alu 0 310 1 1754 184 0 20 chr18 8540307 8540478 -77448456 - AluJo SINE Alu -10 302 138 2021 144 0 7 chr18 8540478 8540776 -77448158 - AluSx SINE Alu -16 296 1 1754 184 0 20 chr18 8540776 8540909 -77448025 - AluJo SINE Alu -174 138 4 295 169 56 0 chr18 8540913 8540984 -77447950 + L1MC5 LINE L1 7703 7777 -184 216 286 43 43 chr18 8541480 8541550 -77447384 - L2 LINE L2 0 3272 3203 680 246 20 101 chr18 8542395 8542692 -77446242 + L1MEc LINE L1 39 311 -6085 483 141 0 0 chr18 8542692 8542756 -77446178 + AluS SINE Alu 2 65 -248 2093 99 14 10 chr18 8542756 8543049 -77445885 - AluSp SINE Alu -19 294 1 2134 96 27 10 chr18 8543053 8543346 -77445588 - AluSg SINE Alu -12 298 1 1723 190 3 3 chr18 8543777 8544077 -77444857 - AluJo SINE Alu -12 300 1 1471 213 64 4 chr18 8544106 8544561 -77444373 - L1MDa LINE L1 -4245 2295 1814 2424 92 0 3 chr18 8544561 8544865 -77444069 - AluSq SINE Alu -10 303 1 2470 80 3 0 chr18 8544865 8545164 -77443770 - AluSq SINE Alu -13 300 1 504 268 24 16 chr18 8545216 8545343 -77443591 + L2 LINE L2 3138 3265 -7 2213 110 0 0 chr18 8546239 8546520 -77442414 + AluSx SINE Alu 24 304 -8 269 296 217 9 chr18 8547168 8547283 -77441651 + L2 LINE L2 3134 3272 0 2322 102 0 0 chr18 8547285 8547580 -77441354 + AluSq SINE Alu 1 295 -18 521 91 57 0 chr18 8548265 8548353 -77440581 + AluSp/q SINE Alu 211 303 -10 1729 140 19 0 chr18 8548425 8548690 -77440244 + MER1B DNA MER1_type 70 339 0 441 148 0 49 chr18 8548732 8548813 -77440121 + FRAM/FAM SINE Alu 1 74 -102 1621 118 5 5 chr18 8548813 8549034 -77439900 - AluSq SINE Alu -68 245 25 2194 100 7 32 chr18 8549040 8549350 -77439584 - AluSg SINE Alu -8 302 1 2255 96 0 7 chr18 8549374 8549656 -77439278 - AluSx SINE Alu -32 280 1 1977 164 41 19 chr18 8549755 8550121 -77438813 - THE1C LTR MaLR 0 375 2 549 305 96 61 chr18 8550941 8551016 -77437918 + L2 LINE L2 1902 1973 -1341 1851 179 98 22 chr18 8551016 8551384 -77437550 + MSTD LTR MaLR 1 396 0 549 305 96 61 chr18 8551384 8551598 -77437336 + L2 LINE L2 1973 2207 -1107 2372 104 0 0 chr18 8551598 8551897 -77437037 - AluSg SINE Alu -11 299 1 549 305 96 61 chr18 8551897 8551950 -77436984 + L2 LINE L2 2207 2257 -1057 182 242 0 0 chr18 8551962 8551995 -77436939 - L2 LINE L2 -1057 2257 2225 302 151 19 0 chr18 8552074 8552127 -77436807 + AluSp SINE Alu 136 189 -114 2235 85 170 3 chr18 8552247 8552611 -77436323 + pTR5 LTR ERV1 1604 2028 -410 325 234 11 0 chr18 8552612 8552706 -77436228 + LTR30 LTR ERV1 548 642 -80 1542 97 0 9 chr18 8552709 8552936 -77435998 + pTR5 LTR ERV1 172 396 -2042 665 176 57 0 chr18 8552955 8553114 -77435820 + Charlie1 DNA MER1_type 2594 2761 0 194 367 86 0 chr18 8553117 8553245 -77435689 - L2 LINE L2 -887 2427 2289 2141 113 0 13 chr18 8553404 8553704 -77435230 - AluSg SINE Alu -14 296 1 1935 106 26 44 chr18 8553804 8553887 -77435047 + LTR56 LTR ERV1 1 84 -361 1482 180 0 75 chr18 8553887 8554222 -77434712 + AluJo SINE Alu 1 312 0 1935 106 26 44 chr18 8554222 8554478 -77434456 + LTR56 LTR ERV1 84 335 -110 596 139 20 10 chr18 8554479 8554580 -77434354 + AluSg1 SINE Alu 2 103 -206 23 0 0 0 chr18 8555236 8555259 -77433675 + GC_rich Low_complexity Low_complexity 1 23 0 192 77 0 0 chr18 8555272 8555298 -77433636 + (CACCC)n Simple_repeat Simple_repeat 5 30 0 1267 153 55 67 chr18 8555935 8556189 -77432745 - AluJo SINE Alu -61 251 1 566 295 212 25 chr18 8556198 8556799 -77432135 - L2 LINE L2 -245 3068 2355 760 173 0 0 chr18 8556815 8556925 -77432009 + FLAM_C SINE Alu 2 111 -32 1282 104 6 28 chr18 8556945 8557127 -77431807 - AluSg/x SINE Alu -7 305 128 2517 87 0 0 chr18 8557132 8557443 -77431491 - AluY SINE Alu 0 311 1 266 173 67 0 chr18 8557634 8557709 -77431225 - AluJ/FRAM SINE Alu -6 296 217 225 200 0 0 chr18 8557818 8557868 -77431066 - Alu SINE Alu -83 50 1 559 157 102 30 chr18 8557868 8558034 -77430900 - ORSL DNA AcHobo -74 201 24 23 33 0 0 chr18 8559090 8559120 -77429814 + AT_rich Low_complexity Low_complexity 1 30 0 1226 106 144 56 chr18 8559363 8559647 -77429287 + THE1C LTR MaLR 1 309 -66 2223 88 27 14 chr18 8559649 8559943 -77428991 + AluSq SINE Alu 3 300 -13 198 0 0 0 chr18 8560015 8560037 -77428897 + (A)n Simple_repeat Simple_repeat 1 22 0 1998 121 14 0 chr18 8560593 8560882 -77428052 + AluSx SINE Alu 1 293 -19 2225 119 0 0 chr18 8561021 8561314 -77427620 + AluSx SINE Alu 1 293 -19 1192 175 77 122 chr18 8563118 8563244 -77425690 + MLT1A1 LTR MaLR 5 135 -230 1725 181 7 0 chr18 8563244 8563521 -77425413 + AluJo SINE Alu 1 279 -33 288 0 0 0 chr18 8563521 8563553 -77425381 + (CA)n Simple_repeat Simple_repeat 1 32 0 1192 175 77 122 chr18 8563553 8563803 -77425131 + MLT1A1 LTR MaLR 133 365 0 592 260 81 0 chr18 8563999 8564172 -77424762 + MIR SINE MIR 8 194 -68 910 185 63 5 chr18 8565125 8565314 -77423620 + MER3 DNA MER1_type 1 200 -9 849 156 0 22 chr18 8565541 8565676 -77423258 - FLAM_C SINE Alu 0 133 2 528 143 156 71 chr18 8567022 8567176 -77421758 - MER53 DNA DNA 0 189 23 398 288 39 78 chr18 8567663 8567986 -77420948 + L1 LINE L1 4116 4413 -1733 1363 184 98 0 chr18 8567986 8568252 -77420682 + AluJo SINE Alu 1 292 -20 398 288 39 78 chr18 8568252 8568442 -77420492 + L1 LINE L1 4413 4609 -1537 386 243 75 75 chr18 8568741 8568914 -77420020 + MER5B DNA MER1_type 4 176 -2 260 301 8 38 chr18 8570514 8570647 -77418287 + L3b LINE CR1 1205 1333 -250 197 250 0 0 chr18 8570675 8570723 -77418211 - L2 LINE L2 -1 3312 3265 2555 28 0 0 chr18 8572011 8572329 -77416605 + AluY SINE Alu 1 318 0 530 210 24 8 chr18 8572681 8572805 -77416129 + L2 LINE L2 3188 3313 0 304 306 163 20 chr18 8576055 8576398 -77412536 - L2 LINE L2 -1 3271 2880 26 30 0 0 chr18 8577171 8577204 -77411730 + AT_rich Low_complexity Low_complexity 1 33 0 435 273 143 35 chr18 8579167 8579600 -77409334 + L1ME4a LINE L1 5637 6116 -5 23 54 0 0 chr18 8579605 8579642 -77409292 + AT_rich Low_complexity Low_complexity 1 37 0 432 211 35 9 chr18 8579710 8579824 -77409110 + L1MA9 LINE L1 6174 6290 -22 1936 123 30 43 chr18 8580114 8580416 -77408518 + AluSx SINE Alu 1 298 -14 194 103 0 51 chr18 8580418 8580457 -77408477 + (GGAGAA)n Simple_repeat Simple_repeat 4 40 0 1248 89 0 0 chr18 8580459 8580639 -77408295 + (GAA)n Simple_repeat Simple_repeat 1 180 0 283 309 18 0 chr18 8580978 8581088 -77407846 - MIR SINE MIR -94 168 57 323 267 175 8 chr18 8581732 8581852 -77407082 + MIR SINE MIR 107 246 -16 489 110 0 0 chr18 8582444 8582517 -77406417 + (TA)n Simple_repeat Simple_repeat 1 73 0 314 219 42 73 chr18 8583095 8583191 -77405743 - MIR SINE MIR -115 147 55 324 333 11 34 chr18 8584967 8585144 -77403790 - MER5B DNA MER1_type -3 175 3 1014 195 26 5 chr18 8585260 8585455 -77403479 - MER20 DNA MER1_type -4 215 17 251 240 32 25 chr18 8589716 8589796 -77399138 + MIR SINE MIR 84 150 -58 212 200 0 0 chr18 8590006 8590046 -77398888 - L2 LINE L2 -3 3269 3230 1799 171 4 0 chr18 8590856 8591196 -77397738 + AluJo SINE Alu 1 341 0 239 270 72 36 chr18 8595169 8595280 -77393654 + MIR SINE MIR 40 154 -54 1056 24 0 0 chr18 8595291 8595418 -77393516 + (AATAG)n Simple_repeat Simple_repeat 4 130 0 181 264 38 0 chr18 8595452 8595505 -77393429 + MIR SINE MIR 207 261 -1 1840 165 11 0 chr18 8597124 8597403 -77391531 + AluJo SINE Alu 1 282 -30 1219 211 55 25 chr18 8598525 8598842 -77390092 + MER33 DNA MER1_type 1 315 -9 222 265 0 0 chr18 8599130 8599179 -77389755 + L2 LINE L2 3265 3313 0 295 247 62 21 chr18 8601404 8601501 -77387433 + L2 LINE L2 3162 3262 -10 2217 126 0 0 chr18 8602872 8603173 -77385761 - AluSq SINE Alu -12 301 1 1384 210 62 4 chr18 8603975 8604251 -77384683 + AluJo SINE Alu 1 292 -20 315 0 0 0 chr18 8604416 8604451 -77384483 + (TG)n Simple_repeat Simple_repeat 2 36 0 1999 156 0 0 chr18 8606358 8606653 -77382281 - AluSx SINE Alu -17 295 1 325 268 34 9 chr18 8607873 8608053 -77380881 - MIR SINE MIR -8 254 3 290 288 137 26 chr18 8608685 8608838 -77380096 - MIR SINE MIR -73 189 20 192 194 208 28 chr18 8611185 8611257 -77377677 + MER5B DNA MER1_type 23 107 -71 819 250 90 8 chr18 8611505 8611761 -77377173 - Charlie8 DNA MER1_type -2140 277 1 327 25 0 0 chr18 8613207 8613247 -77375687 + (TG)n Simple_repeat Simple_repeat 1 40 0 187 154 154 39 chr18 8613309 8613361 -77375573 + MIR SINE MIR 169 226 -36 431 374 131 10 chr18 8613397 8613809 -77375125 + L2 LINE L2 2811 3272 0 464 32 0 16 chr18 8614415 8614478 -77374456 + (TCCA)n Simple_repeat Simple_repeat 1 62 0 214 393 90 22 chr18 8614479 8614746 -77374188 - L2 LINE L2 -47 3225 2941 2837 137 7 19 chr18 8614951 8615381 -77373553 + MSTB LTR MaLR 2 426 0 415 312 0 16 chr18 8616678 8616803 -77372131 + L2 LINE L2 3171 3293 -20 287 251 207 62 chr18 8616870 8617049 -77371885 - MIR SINE MIR -22 240 36 288 280 55 95 chr18 8617109 8617309 -77371625 - L3 LINE CR1 -120 1457 1266 3495 95 37 37 chr18 8618390 8618904 -77370030 + MER75 DNA T2_type 1 514 0 2287 109 20 72 chr18 8619454 8619858 -77369076 + MER4A LTR ERV1 282 664 0 657 194 32 0 chr18 8619858 8619981 -77368953 - MER2 DNA MER2_type -212 133 7 1464 208 146 16 chr18 8620297 8620812 -77368122 - MER92B LTR ERV1 -53 583 2 320 284 75 65 chr18 8622507 8622799 -77366135 + HAL1b LINE L1 53 347 -1001 3821 194 17 17 chr18 8622848 8625048 -77363886 + L1MB3 LINE L1 5 2547 -3835 241 167 30 54 chr18 8625052 8625220 -77363714 + (TA)n Simple_repeat Simple_repeat 1 164 0 4138 259 37 8 chr18 8625228 8626541 -77362393 + L1MB3 LINE L1 2519 3870 -2512 446 171 0 0 chr18 8626543 8626619 -77362315 + L1MB3 LINE L1 4401 4476 -1906 2100 176 34 65 chr18 8626619 8627035 -77361899 + L1MB3 LINE L1 5969 6371 -48 4416 126 3 26 chr18 8627035 8627083 -77361851 - L1PA15 LINE L1 0 6165 6117 2040 143 0 7 chr18 8627083 8627383 -77361551 + AluSx SINE Alu 1 298 -14 4416 126 3 26 chr18 8627383 8627992 -77360942 - L1PA15 LINE L1 -48 6117 5523 2100 176 34 65 chr18 8627992 8628040 -77360894 + L1MB3 LINE L1 6371 6419 0 416 296 66 7 chr18 8628045 8628197 -77360737 + HAL1b LINE L1 444 604 -744 520 181 29 9 chr18 8628544 8628649 -77360285 - LTR48B LTR ERV1 -70 574 468 471 287 80 80 chr18 8628719 8629297 -77359637 + L1MC4a LINE L1 4729 5306 -840 1556 250 50 80 chr18 8629303 8629990 -77358944 + L1MC4a LINE L1 5337 6002 -1806 830 201 51 44 chr18 8630527 8630752 -77358182 - MLT1A2 LTR MaLR -167 223 1 211 242 242 33 chr18 8630900 8631020 -77357914 - L3b LINE CR1 -87 1496 1352 987 209 131 18 chr18 8631530 8631812 -77357122 + MER2 DNA MER2_type 6 319 -26 29 0 0 0 chr18 8632738 8632767 -77356167 + AT_rich Low_complexity Low_complexity 1 29 0 882 146 0 15 chr18 8634567 8634704 -77354230 + FLAM_C SINE Alu 3 137 -6 699 165 0 0 chr18 8634709 8634824 -77354110 + FRAM SINE Alu 61 175 -1 235 274 230 18 chr18 8635741 8635854 -77353080 + L2 LINE L2 3136 3272 0 313 271 22 59 chr18 8636023 8636191 -77352743 + MIR SINE MIR 31 194 -68 334 292 251 45 chr18 8636603 8637387 -77351547 - L2 LINE L2 -367 2947 2002 2265 104 0 13 chr18 8637699 8638006 -77350928 + AluSc SINE Alu 1 303 -6 613 157 39 0 chr18 8638600 8638702 -77350232 - L1PB3 LINE L1 -96 6058 5953 261 296 74 89 chr18 8639515 8639718 -77349216 - L2 LINE L2 -8 3264 3065 630 174 0 17 chr18 8639744 8639859 -77349075 - U5 snRNA snRNA 0 116 4 235 336 9 27 chr18 8639996 8640106 -77348828 + MER5A DNA MER1_type 81 188 -1 323 311 102 36 chr18 8640266 8640433 -77348501 - MER5B DNA MER1_type 0 178 1 504 330 63 16 chr18 8641576 8641767 -77347167 - MIR SINE MIR -3 259 60 1027 293 142 61 chr18 8641987 8643280 -77345654 - L2 LINE L2 -2 3270 1817 301 366 89 28 chr18 8644023 8644495 -77344439 + L2 LINE L2 2232 2732 -582 383 278 56 50 chr18 8644613 8644793 -77344141 - MIR SINE MIR -29 233 53 477 295 97 18 chr18 8644908 8645125 -77343809 + MIR SINE MIR 13 246 -16 265 339 35 17 chr18 8645804 8645919 -77343015 - MIR SINE MIR -112 150 34 1224 56 0 0 chr18 8646057 8646199 -77342735 - AluSq/x SINE Alu -170 142 1 2441 126 0 15 chr18 8647626 8647968 -77340966 - MER1B DNA MER1_type 0 337 1 253 311 0 0 chr18 8648844 8648905 -77340029 - MIR SINE MIR -93 115 55 7349 70 14 3 chr18 8649042 8650830 -77338104 - L1PA8 LINE L1 0 6172 4373 293 257 101 50 chr18 8651406 8651660 -77337274 + L1M4 LINE L1 4204 4468 -1678 1203 94 18 18 chr18 8652524 8652695 -77336239 - AluSg/x SINE Alu -15 295 125 449 268 151 34 chr18 8653521 8653760 -77335174 - MLT1H LTR MaLR -64 485 219 736 208 0 13 chr18 8653842 8653991 -77334943 - L1PB4 LINE L1 0 6156 6010 2211 108 7 3 chr18 8653992 8654298 -77334636 - AluY SINE Alu -4 307 1 23 0 0 0 chr18 8654298 8654321 -77334613 + AT_rich Low_complexity Low_complexity 1 23 0 279 0 0 0 chr18 8654407 8654438 -77334496 + (CA)n Simple_repeat Simple_repeat 2 32 0 2232 145 65 0 chr18 8654560 8654947 -77333987 - L1MB3 LINE L1 0 6183 5772 9345 146 118 110 chr18 8654948 8656169 -77332765 - L1M4 LINE L1 -3399 2983 1773 8245 21 0 0 chr18 8656169 8657810 -77331124 - L1PA3 LINE L1 0 6155 4514 9345 146 118 110 chr18 8657810 8659516 -77329418 - L1M4 LINE L1 -4609 1773 17 2462 76 0 3 chr18 8660273 8660575 -77328359 - AluY SINE Alu -10 301 1 829 198 35 12 chr18 8660836 8661008 -77327926 + MLT1B LTR MaLR 1 176 -198 260 227 0 45 chr18 8661010 8661076 -77327858 + CT-rich Low_complexity Low_complexity 3 65 0 898 241 5 5 chr18 8661085 8661292 -77327642 + MLT1B LTR MaLR 184 390 0 292 258 49 55 chr18 8662049 8662212 -77326722 - L1ME4a LINE L1 -5 6116 5955 943 208 75 42 chr18 8662270 8662482 -77326452 + MER20 DNA MER1_type 1 219 0 1052 221 16 55 chr18 8663745 8664057 -77324877 - AluJb SINE Alu -2 300 1 273 146 0 0 chr18 8664379 8664427 -77324507 + (CA)n Simple_repeat Simple_repeat 2 49 0 737 305 131 41 chr18 8664486 8665247 -77323687 + L2 LINE L2 1808 2637 -677 526 308 25 120 chr18 8665451 8665818 -77323116 + L2 LINE L2 2941 3272 0 273 291 25 0 chr18 8666660 8666739 -77322195 + GA-rich Low_complexity Low_complexity 3 83 0 11460 218 36 55 chr18 8667188 8667422 -77321512 + L1PA16 LINE L1 1754 1991 -4155 2094 141 60 14 chr18 8667422 8667770 -77321164 - THE1B LTR MaLR 0 364 1 11460 218 36 55 chr18 8667770 8670551 -77318383 + L1PA16 LINE L1 1991 4824 -1322 2052 125 28 0 chr18 8670551 8670839 -77318095 + AluSx SINE Alu 1 296 -16 11460 218 36 55 chr18 8670839 8671046 -77317888 + L1PA16 LINE L1 4824 5033 -1113 785 177 14 0 chr18 8671046 8671193 -77317741 + BC200 scRNA scRNA 7 155 -45 11460 218 36 55 chr18 8671193 8671503 -77317431 + L1PA16 LINE L1 5033 5363 -783 2548 158 7 0 chr18 8671505 8671917 -77317017 + L1PA16 LINE L1 5743 6157 -9 21 0 0 0 chr18 8672170 8672191 -77316743 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 8672463 8672491 -77316443 + AT_rich Low_complexity Low_complexity 1 28 0 2299 109 0 0 chr18 8673293 8673596 -77315338 + AluSx SINE Alu 1 303 -9 1633 201 34 32 chr18 8675398 8675840 -77313094 + MER65A LTR ERV1 1 443 -2 227 303 112 35 chr18 8676333 8676484 -77312450 + MIR SINE MIR 2 167 -41 187 372 0 13 chr18 8676729 8676807 -77312127 + L2 LINE L2 3201 3277 -36 231 36 0 0 chr18 8677525 8677553 -77311381 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 275 282 54 2 chr18 8678825 8678913 -77310021 + MIR SINE MIR 62 141 -67 2147 127 6 19 chr18 8679056 8679371 -77309563 - AluSx SINE Alu -1 311 1 1276 129 50 43 chr18 8682441 8682719 -77306215 - L1MC2 LINE L1 0 6624 6345 2927 162 69 45 chr18 8682720 8683686 -77305248 - L1MC2 LINE L1 -377 6247 5267 * 4134 164 171 27 chr18 8683684 8684888 -77304046 - L1MC2 LINE L1 -4038 2388 1011 * 13599 195 25 13 chr18 8684873 8685336 -77303598 - L1PB2 LINE L1 0 6208 5752 351 0 0 0 chr18 8685336 8685375 -77303559 + (TG)n Simple_repeat Simple_repeat 2 40 0 13599 195 25 13 chr18 8685375 8691810 -77297124 - L1PB2 LINE L1 -456 5752 1 681 290 73 47 chr18 8691888 8692544 -77296390 + L1MEd LINE L1 963 1670 -4726 1746 146 3 68 chr18 8692572 8692880 -77296054 + AluJo SINE Alu 1 288 -24 396 273 57 80 chr18 8692955 8693145 -77295789 + L1MEd LINE L1 2034 2218 -4178 2026 143 10 7 chr18 8693145 8693445 -77295489 + AluSx SINE Alu 1 301 -11 396 273 57 80 chr18 8693445 8693518 -77295416 + L1MEd LINE L1 2218 2291 -4105 826 234 18 6 chr18 8693523 8693872 -77295062 + AluJb SINE Alu 134 484 0 276 185 0 0 chr18 8693873 8693927 -77295007 + GA-rich Low_complexity Low_complexity 4 57 0 241 296 111 18 chr18 8693979 8694320 -77294614 + L1MEd LINE L1 2311 2683 -3532 1405 240 87 88 chr18 8694340 8694595 -77294339 + L1MEd LINE L1 2848 3102 -3113 2091 77 0 86 chr18 8694595 8694918 -77294016 + AluY SINE Alu 1 296 -15 438 69 0 0 chr18 8694918 8694976 -77293958 + (TA)n Simple_repeat Simple_repeat 2 59 0 2091 77 0 86 chr18 8694976 8694988 -77293946 + AluY SINE Alu 296 307 -4 1405 240 87 88 chr18 8694988 8695666 -77293268 + L1MEd LINE L1 3102 3782 -2433 4670 173 59 26 chr18 8695666 8696090 -77292844 - Tigger6a DNA MER2_type -514 1083 675 227 53 0 26 chr18 8696090 8696128 -77292806 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 4670 173 59 26 chr18 8696128 8696750 -77292184 - Tigger6a DNA MER2_type -922 675 2 1405 240 87 88 chr18 8696750 8697071 -77291863 + L1MEd LINE L1 3782 4102 -2113 * 1830 252 106 19 chr18 8697052 8698568 -77290366 + L1MEd LINE L1 4526 6163 -76 23 0 0 0 chr18 8699541 8699564 -77289370 + AT_rich Low_complexity Low_complexity 1 23 0 2238 90 4 0 chr18 8699785 8700100 -77288834 + AluSg SINE Alu 1 316 0 2099 136 3 3 chr18 8700180 8700490 -77288444 + AluSx SINE Alu 1 310 -2 3762 105 11 11 chr18 8700679 8701204 -77287730 - MER1A DNA MER1_type 0 527 3 444 275 134 14 chr18 8702674 8702816 -77286118 - MIR3 SINE MIR -33 175 17 21 57 0 0 chr18 8703620 8703655 -77285279 + AT_rich Low_complexity Low_complexity 1 35 0 208 200 25 113 chr18 8703701 8703781 -77285153 - MIR SINE MIR -70 192 120 251 311 92 0 chr18 8704105 8704224 -77284710 + MIR SINE MIR 77 206 -56 24 0 0 0 chr18 8704291 8704315 -77284619 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr18 8704743 8704781 -77284153 + AT_rich Low_complexity Low_complexity 1 38 0 349 271 12 162 chr18 8704977 8705182 -77283752 - MIR SINE MIR -61 147 16 994 240 9 13 chr18 8706218 8706443 -77282491 + MER58A DNA MER1_type 1 224 0 485 251 63 21 chr18 8707228 8707419 -77281515 + L1MC4a LINE L1 5696 5894 -1914 21 0 0 0 chr18 8707430 8707451 -77281483 + AT_rich Low_complexity Low_complexity 1 21 0 1971 139 40 37 chr18 8707465 8707839 -77281095 + THE1C LTR MaLR 1 375 0 426 286 45 55 chr18 8708748 8708968 -77279966 + L2 LINE L2 3096 3313 0 269 265 29 15 chr18 8709009 8709077 -77279857 + MIR SINE MIR 24 92 -170 * 389 282 67 20 chr18 8709055 8709204 -77279730 + L2 LINE L2 3158 3313 0 273 314 95 19 chr18 8710349 8710454 -77278480 - L2 LINE L2 -4 3309 3197 353 82 0 0 chr18 8711415 8711464 -77277470 - L1PA7 LINE L1 -8 6146 6098 414 226 33 108 chr18 8711625 8711837 -77277097 + MIR SINE MIR 66 261 -1 227 79 26 0 chr18 8712591 8712629 -77276305 + (TA)n Simple_repeat Simple_repeat 2 40 0 * 279 0 0 0 chr18 8712628 8712659 -77276275 + (CA)n Simple_repeat Simple_repeat 2 32 0 1153 148 13 74 chr18 8712663 8712892 -77276042 - AluJb SINE Alu -13 299 85 21 0 0 0 chr18 8715206 8715227 -77273707 + AT_rich Low_complexity Low_complexity 1 21 0 235 279 87 76 chr18 8717138 8717310 -77271624 - MIR SINE MIR -2 260 87 2527 50 0 10 chr18 8717388 8717690 -77271244 - AluY SINE Alu -12 299 1 254 354 39 8 chr18 8717879 8718006 -77270928 + L3b LINE CR1 1316 1446 -137 281 273 0 0 chr18 8719093 8719170 -77269764 - MER116 DNA Mariner 0 80 4 242 115 19 0 chr18 8721596 8721648 -77267286 + (TA)n Simple_repeat Simple_repeat 1 53 0 189 74 0 0 chr18 8721888 8721915 -77267019 + (TCTA)n Simple_repeat Simple_repeat 4 30 0 672 270 111 9 chr18 8722075 8722301 -77266633 + MIR SINE MIR 4 252 -10 3535 205 204 9 chr18 8722346 8723463 -77265471 - L1MDa LINE L1 -5191 1349 15 3747 137 35 5 chr18 8726115 8726780 -77262154 + L1MB1 LINE L1 5479 6163 -5 1939 93 4 0 chr18 8727224 8727471 -77261463 - AluSx SINE Alu -6 306 59 278 315 51 55 chr18 8729111 8729346 -77259588 - MIR SINE MIR -1 261 28 436 290 22 62 chr18 8729566 8729790 -77259144 - L1M4 LINE L1 -2848 3298 3084 1481 264 31 20 chr18 8730314 8730867 -77258067 - L1ME3A LINE L1 0 6170 5612 484 192 24 32 chr18 8733849 8733974 -77254960 + MER3 DNA MER1_type 2 125 -84 329 95 16 0 chr18 8734028 8734091 -77254843 + (CA)n Simple_repeat Simple_repeat 1 64 0 183 80 0 0 chr18 8734209 8734234 -77254700 + (TCCCC)n Simple_repeat Simple_repeat 2 26 0 2452 107 18 46 chr18 8734325 8734691 -77254243 + MER50 LTR ERV1 8 383 -351 2593 93 3 3 chr18 8734691 8735046 -77253888 - THE1A LTR MaLR 0 355 1 11409 89 13 8 chr18 8735046 8736614 -77252320 - THE1A-int LTR MaLR 0 1580 4 2780 67 3 6 chr18 8736618 8736974 -77251960 - THE1A LTR MaLR 0 355 1 2452 107 18 46 chr18 8736974 8737040 -77251894 + MER50 LTR ERV1 385 434 -300 2146 116 13 20 chr18 8737045 8737605 -77251329 + MER51A LTR ERV1 6 632 -2 1076 219 6 32 chr18 8737605 8737914 -77251020 + MER50 LTR ERV1 429 729 -5 23 33 0 0 chr18 8738337 8738367 -77250567 + AT_rich Low_complexity Low_complexity 1 30 0 2245 108 3 3 chr18 8738678 8738983 -77249951 + AluSq SINE Alu 4 308 -5 799 322 13 8 chr18 8739132 8739371 -77249563 - MIR SINE MIR -21 241 2 191 283 0 22 chr18 8739423 8739469 -77249465 + L2 LINE L2 3210 3254 -18 22 35 0 0 chr18 8740277 8740306 -77248628 + AT_rich Low_complexity Low_complexity 1 29 0 1077 182 10 5 chr18 8741976 8742185 -77246749 - MER2 DNA MER2_type -135 210 1 501 293 16 3 chr18 8743491 8743814 -77245120 + (TG)n Simple_repeat Simple_repeat 1 327 0 226 304 11 11 chr18 8744226 8744318 -77244616 + GA-rich Low_complexity Low_complexity 5 96 0 710 146 24 55 chr18 8744361 8744526 -77244408 + L1MB8 LINE L1 6014 6173 -5 24 32 0 0 chr18 8744547 8744578 -77244356 + AT_rich Low_complexity Low_complexity 1 31 0 186 103 0 0 chr18 8744870 8744899 -77244035 + (TA)n Simple_repeat Simple_repeat 1 29 0 1676 144 78 0 chr18 8744899 8745233 -77243701 - L1MA8 LINE L1 -36 6255 5896 222 105 0 0 chr18 8746621 8746659 -77242275 + (A)n Simple_repeat Simple_repeat 1 38 0 321 246 0 0 chr18 8747157 8747222 -77241712 - L2 LINE L2 -16 3297 3233 198 91 0 0 chr18 8747223 8747256 -77241678 + (CA)n Simple_repeat Simple_repeat 2 34 0 335 307 206 34 chr18 8748305 8748843 -77240091 - L2 LINE L2 -509 2805 2175 196 289 22 0 chr18 8748880 8748925 -77240009 - MER5A DNA MER1_type -1 188 143 251 239 94 60 chr18 8748945 8749062 -77239872 - MER5A DNA MER1_type -1 188 68 194 278 80 49 chr18 8748946 8749108 -77239826 + MER5A DNA MER1_type 17 183 -6 * 2100 133 0 10 chr18 8749517 8749819 -77239115 - AluSx SINE Alu -11 301 3 437 254 9 97 chr18 8749959 8750289 -77238645 - L1ME3A LINE L1 -88 6082 5782 320 299 93 9 chr18 8750719 8750826 -77238108 + MIR SINE MIR 34 149 -113 397 307 86 90 chr18 8751229 8751356 -77237578 + L2 LINE L2 2818 2944 -328 237 33 0 0 chr18 8751356 8751386 -77237548 + (CA)n Simple_repeat Simple_repeat 2 31 0 397 307 86 90 chr18 8751386 8751714 -77237220 + L2 LINE L2 2944 3271 -1 264 77 0 0 chr18 8752137 8752176 -77236758 + (T)n Simple_repeat Simple_repeat 1 39 0 1338 242 85 16 chr18 8753646 8754151 -77234783 - L1ME3A LINE L1 -5 6165 5626 390 74 0 0 chr18 8754842 8754896 -77234038 + (TG)n Simple_repeat Simple_repeat 2 55 0 215 333 28 37 chr18 8754909 8755017 -77233917 - L3 LINE CR1 -4 1573 1467 382 319 67 2 chr18 8755138 8755320 -77233614 + MIR SINE MIR 16 206 -56 2208 115 48 25 chr18 8755498 8755854 -77233080 + THE1B LTR MaLR 1 364 0 2670 94 3 3 chr18 8756467 8756829 -77232105 + THE1B LTR MaLR 1 362 -2 343 301 29 10 chr18 8756834 8756937 -77231997 - MIR3 SINE MIR -10 198 94 344 312 70 35 chr18 8757263 8757570 -77231364 + L1MEd LINE L1 991 1398 -1092 186 143 48 0 chr18 8757571 8757634 -77231300 + (TA)n Simple_repeat Simple_repeat 1 66 0 201 147 0 0 chr18 8758322 8758356 -77230578 + (GGAA)n Simple_repeat Simple_repeat 1 34 0 1982 160 0 3 chr18 8758579 8758886 -77230048 - AluJo SINE Alu -6 306 1 434 308 112 19 chr18 8759172 8759432 -77229502 + L1ME4a LINE L1 5831 6114 -7 1341 140 65 0 chr18 8760346 8760560 -77228374 - MER30 DNA MER1_type 0 230 3 548 270 163 54 chr18 8760991 8762038 -77226896 + HAL1 LINE L1 733 1893 -614 369 0 0 0 chr18 8762525 8762566 -77226368 + (TG)n Simple_repeat Simple_repeat 2 42 0 351 301 120 42 chr18 8762667 8763185 -77225749 - L1M4 LINE L1 -3105 3041 2484 208 327 112 9 chr18 8763273 8763380 -77225554 - MIR SINE MIR -61 147 30 348 148 0 0 chr18 8765016 8765077 -77223857 + (CA)n Simple_repeat Simple_repeat 2 62 0 184 250 155 109 chr18 8766096 8766400 -77222534 + L2 LINE L2 1477 1794 -1520 196 316 132 18 chr18 8766529 8766643 -77222291 + L2 LINE L2 3142 3268 -4 1020 333 162 13 chr18 8766706 8767818 -77221116 + L2 LINE L2 1989 3272 0 1105 197 19 24 chr18 8768173 8768386 -77220548 + AluJo SINE Alu 6 217 -95 373 215 85 100 chr18 8769290 8769420 -77219514 + L2 LINE L2 3138 3265 -7 2461 79 3 0 chr18 8769445 8769750 -77219184 + AluY SINE Alu 1 306 -5 23 54 0 0 chr18 8771239 8771276 -77217658 + AT_rich Low_complexity Low_complexity 1 37 0 515 302 107 19 chr18 8771283 8771601 -77217333 - L2 LINE L2 -2 3311 2966 570 327 167 28 chr18 8771809 8772589 -77216345 - L2 LINE L2 -1088 2226 1339 1491 177 23 36 chr18 8773955 8774260 -77214674 - AluJb SINE Alu -11 301 1 5934 32 0 0 chr18 8774577 8775228 -77213706 - L1PA4 LINE L1 0 6155 5505 180 182 0 0 chr18 8775379 8775423 -77213511 + CT-rich Low_complexity Low_complexity 1 44 0 309 51 0 0 chr18 8775953 8775992 -77212942 + (CA)n Simple_repeat Simple_repeat 2 40 0 220 378 40 20 chr18 8776731 8776879 -77212055 - MIR3 SINE MIR -48 160 10 24 32 0 0 chr18 8776903 8776934 -77212000 + AT_rich Low_complexity Low_complexity 1 31 0 2193 91 0 11 chr18 8776934 8777221 -77211713 - AluSq SINE Alu -27 286 3 6427 164 36 24 chr18 8777236 8779141 -77209793 - L1MA9 LINE L1 -20 6292 4241 2174 132 70 14 chr18 8779141 8779496 -77209438 + THE1C LTR MaLR 1 375 0 6427 164 36 24 chr18 8779496 8779673 -77209261 - L1MA9 LINE L1 -2071 4241 4068 528 248 8 0 chr18 8779651 8779780 -77209154 - L1MA9 LINE L1 -3538 2608 2479 * 280 321 80 48 chr18 8783788 8784037 -77204897 - L2 LINE L2 -201 3112 2856 2254 110 3 0 chr18 8785976 8786277 -77202657 + AluSq SINE Alu 1 302 -11 29 47 0 0 chr18 8787430 8787473 -77201461 + AT_rich Low_complexity Low_complexity 1 43 0 197 242 30 45 chr18 8787751 8787817 -77201117 + MIR3 SINE MIR 121 185 -23 256 145 13 13 chr18 8788760 8788836 -77200098 + (TG)n Simple_repeat Simple_repeat 2 77 0 44299 44 1 3 chr18 8789213 8795375 -77193559 + L1PA4 LINE L1 1 6153 -2 693 263 110 9 chr18 8795524 8795752 -77193182 - MIR SINE MIR -10 252 2 216 266 224 28 chr18 8795918 8796132 -77192802 - L2 LINE L2 -768 2546 2291 27 49 0 0 chr18 8798254 8798295 -77190639 + AT_rich Low_complexity Low_complexity 1 41 0 979 222 28 0 chr18 8798499 8798679 -77190255 + MER5A DNA MER1_type 2 186 -3 980 311 67 72 chr18 8798791 8799034 -77189900 + L1ME2 LINE L1 130 373 -6023 1922 146 3 3 chr18 8799034 8799322 -77189612 + AluJb SINE Alu 1 288 -24 980 311 67 72 chr18 8799322 8800129 -77188805 + L1ME2 LINE L1 373 1169 -5227 1794 162 17 0 chr18 8800129 8800419 -77188515 + AluSx SINE Alu 6 300 -12 980 311 67 72 chr18 8800419 8801067 -77187867 + L1ME2 LINE L1 1169 1819 -4577 * 2100 259 83 33 chr18 8801060 8803157 -77185777 + L1ME2 LINE L1 3886 6224 -9 1373 142 28 45 chr18 8805228 8805475 -77183459 - AluJo SINE Alu -69 243 1 235 294 39 29 chr18 8805506 8805608 -77183326 - MIR SINE MIR -119 143 41 254 207 69 0 chr18 8805809 8805867 -77183067 - MIR SINE MIR -108 154 93 1695 171 100 3 chr18 8806356 8806695 -77182239 + L1MB4 LINE L1 5681 6052 -128 856 147 0 22 chr18 8806718 8806854 -77182080 - L1PA15 LINE L1 -4 6161 6029 2250 112 0 13 chr18 8806854 8807167 -77181767 - AluSx SINE Alu -3 309 1 2428 95 0 0 chr18 8807529 8807834 -77181100 + AluSp SINE Alu 1 305 -8 911 119 8 0 chr18 8807841 8807967 -77180967 + AluJb SINE Alu 1 127 -185 2416 99 0 0 chr18 8807968 8808272 -77180662 + AluSx SINE Alu 1 304 -8 300 133 0 0 chr18 8808942 8809002 -77179932 + (TG)n Simple_repeat Simple_repeat 1 60 0 841 213 19 24 chr18 8810287 8810494 -77178440 + MER96B DNA MER1_type? 1 206 -211 1901 101 19 58 chr18 8812277 8812585 -77176349 + AluSx SINE Alu 11 306 -6 425 301 0 7 chr18 8812585 8812721 -77176213 + L1ME1 LINE L1 5601 5735 -431 818 191 7 7 chr18 8812721 8812862 -77176072 + FLAM_A SINE Alu 1 141 -1 321 205 118 39 chr18 8812864 8812991 -77175943 + L1ME1 LINE L1 5729 5868 -310 379 325 70 25 chr18 8813117 8813517 -77175417 - L1M4 LINE L1 -815 5331 4914 2082 135 0 3 chr18 8813645 8813941 -77174993 + AluSx SINE Alu 5 299 -13 292 216 40 0 chr18 8813992 8814066 -77174868 - L1M4 LINE L1 -1534 4612 4536 2232 96 0 4 chr18 8814463 8814749 -77174185 + AluSx SINE Alu 1 285 -27 230 26 26 26 chr18 8814749 8814788 -77174146 + (TAAA)n Simple_repeat Simple_repeat 2 172 0 2449 58 10 10 chr18 8814801 8815112 -77173822 + AluY SINE Alu 1 311 0 284 227 15 0 chr18 8815121 8815187 -77173747 - L1M4 LINE L1 -1233 4913 4847 650 189 274 10 chr18 8815199 8815400 -77173534 - L1M4 LINE L1 -1374 4772 4519 581 201 75 11 chr18 8815426 8815600 -77173334 - L1M4 LINE L1 -1704 4442 4258 1468 105 5 0 chr18 8815713 8815913 -77173021 + AluSp SINE Alu 104 304 -9 1564 207 14 17 chr18 8815922 8816212 -77172722 + AluJo SINE Alu 4 292 -10 1485 115 30 4 chr18 8816214 8816449 -77172485 + Tigger2 DNA MER2_type 908 1148 -1570 1189 142 24 24 chr18 8816449 8816654 -77172280 + AluJb SINE Alu 87 291 -21 2259 123 82 107 chr18 8816656 8817142 -77171792 + Tigger2 DNA MER2_type 2244 2717 -1 354 261 50 8 chr18 8817148 8817267 -77171667 - L1MEc LINE L1 -4426 1970 1847 215 30 0 30 chr18 8817321 8817354 -77171580 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 26 0 0 0 chr18 8817598 8817624 -77171310 + AT_rich Low_complexity Low_complexity 1 26 0 297 51 0 0 chr18 8817763 8817802 -77171132 + (CA)n Simple_repeat Simple_repeat 2 40 0 273 263 13 40 chr18 8817940 8818016 -77170918 + L2 LINE L2 2576 2649 -665 200 31 62 0 chr18 8818048 8818080 -77170854 + T-rich Low_complexity Low_complexity 2 35 0 1440 184 24 35 chr18 8818100 8818388 -77170546 - AluJb SINE Alu -27 285 1 227 287 58 35 chr18 8818393 8818480 -77170454 - L2 LINE L2 -1191 2123 2035 842 229 11 11 chr18 8818781 8818956 -77169978 + FAM SINE Alu 1 175 0 582 242 45 17 chr18 8819643 8819821 -77169113 + MER63A DNA MER1_type 1 183 -27 2314 92 0 3 chr18 8820017 8820312 -77168622 - AluSc SINE Alu -15 294 1 426 341 54 10 chr18 8820453 8820658 -77168276 + MER115 DNA AcHobo 34 247 -446 557 240 0 0 chr18 8820846 8820950 -77167984 + FRAM SINE Alu 1 100 -76 361 206 0 0 chr18 8821008 8821100 -77167834 + AluS SINE Alu 1 92 -211 35 24 0 0 chr18 8821188 8821230 -77167704 + GC_rich Low_complexity Low_complexity 1 42 0 1989 144 0 20 chr18 8822065 8822370 -77166564 - AluSq SINE Alu -14 299 1 1113 117 0 0 chr18 8822380 8822534 -77166400 - AluSg/x SINE Alu -14 295 142 474 174 0 54 chr18 8823734 8823826 -77165108 - ORSL DNA AcHobo -7 268 182 1651 156 10 23 chr18 8824656 8824957 -77163977 - AluSg SINE Alu -13 297 1 1673 166 33 13 chr18 8824959 8825116 -77163818 - AluJo SINE Alu -4 308 156 248 0 31 0 chr18 8825116 8825148 -77163786 + (CACAC)n Simple_repeat Simple_repeat 3 35 0 1673 166 33 13 chr18 8825148 8825292 -77163642 - AluJo SINE Alu -156 156 1 1280 151 28 52 chr18 8826716 8826968 -77161966 - AluJo SINE Alu -66 246 1 214 267 27 13 chr18 8826999 8827074 -77161860 - MIR SINE MIR -119 143 68 215 246 0 18 chr18 8827310 8827367 -77161567 - MIR SINE MIR -114 148 93 1416 183 158 3 chr18 8827858 8828180 -77160754 + L1MB4 LINE L1 5681 6052 -128 5613 150 14 39 chr18 8828205 8828342 -77160592 - L1PA15 LINE L1 -4 6161 6022 1991 106 0 37 chr18 8828342 8828663 -77160271 - AluSx SINE Alu -3 309 1 5613 150 14 39 chr18 8828663 8829841 -77159093 - L1PA15 LINE L1 -143 6022 4890 328 260 20 10 chr18 8830744 8830844 -77158090 + MER94 DNA DNA 19 119 -15 284 275 94 56 chr18 8831720 8831953 -77156981 + HAL1 LINE L1 2144 2385 -122 292 388 38 6 chr18 8832117 8832277 -77156657 - L2 LINE L2 -937 2377 2213 256 286 154 21 chr18 8832362 8832728 -77156206 + LTR33 LTR ERVL 31 521 0 1974 103 0 93 chr18 8833016 8833397 -77155537 - AluSq SINE Alu 0 352 1 53 57 0 0 chr18 8835329 8835417 -77153517 + AT_rich Low_complexity Low_complexity 1 88 0 1102 222 92 56 chr18 8836004 8836450 -77152484 - MLT1C LTR MaLR 0 467 6 811 274 92 43 chr18 8836457 8837176 -77151758 + L1MCc LINE L1 1212 2173 -4949 975 168 45 107 chr18 8837201 8837492 -77151442 + L1ME3 LINE L1 5879 6151 -11 4999 277 176 29 chr18 8837609 8838762 -77150172 - L2 LINE L2 0 3313 2331 1631 170 3 58 chr18 8838762 8839091 -77149843 + AluJo SINE Alu 1 311 -1 4999 277 176 29 chr18 8839091 8840817 -77148117 - L2 LINE L2 -982 2331 4 22 0 0 0 chr18 8841487 8841509 -77147425 + AT_rich Low_complexity Low_complexity 1 22 0 318 261 61 35 chr18 8841981 8842096 -77146838 + MIR SINE MIR 37 154 -108 2451 74 0 0 chr18 8843213 8843512 -77145422 - AluY SINE Alu -12 299 1 337 264 42 42 chr18 8843860 8844004 -77144930 + MLT1K LTR MaLR 443 586 -2 4298 69 4 8 chr18 8844155 8844688 -77144246 - L1PA10 LINE L1 -1 6167 5637 891 263 0 0 chr18 8846340 8846549 -77142385 - MER3 DNA MER1_type 0 209 1 535 260 18 67 chr18 8848050 8848273 -77140661 - L2 LINE L2 -1 3312 3101 532 344 106 3 chr18 8848285 8848616 -77140318 - L2 LINE L2 -1776 1538 1174 477 158 33 58 chr18 8848763 8848883 -77140051 + L1MA4A LINE L1 6181 6297 -6 240 75 151 0 chr18 8848895 8848948 -77139986 + L1MA4A LINE L1 6238 6298 -5 1042 310 57 56 chr18 8848950 8848964 -77139970 - L2 LINE L2 -462 2852 2840 2376 175 20 0 chr18 8848964 8849359 -77139575 + MER57A LTR ERV1 1 403 0 1042 310 57 56 chr18 8849359 8850025 -77138909 - L2 LINE L2 -474 2840 2171 264 217 17 17 chr18 8850037 8850097 -77138837 - MER5B DNA MER1_type -6 172 113 217 322 56 35 chr18 8850133 8850276 -77138658 - L2 LINE L2 -1150 2164 2019 407 250 194 0 chr18 8850757 8850881 -77138053 - MER5A DNA MER1_type -10 179 32 221 255 0 0 chr18 8851569 8851616 -77137318 + (CATA)n Simple_repeat Simple_repeat 2 48 0 1996 196 95 17 chr18 8852052 8852467 -77136467 + MLT1D LTR MaLR 7 463 -42 787 99 9 0 chr18 8852467 8852578 -77136356 - L1PA8 LINE L1 -1 6171 6060 1996 196 95 17 chr18 8852578 8852625 -77136309 + MLT1D LTR MaLR 463 505 0 947 218 86 12 chr18 8854041 8854337 -77134597 + MER58 DNA MER1_type 1 2406 -14 500 256 161 6 chr18 8854347 8854515 -77134419 + MIR SINE MIR 15 208 -54 1550 172 7 38 chr18 8854879 8855169 -77133765 + AluJb SINE Alu 1 281 -31 414 0 0 0 chr18 8855172 8855218 -77133716 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 204 233 0 0 chr18 8856307 8856380 -77132554 + (CTA)n Simple_repeat Simple_repeat 3 75 0 210 91 0 0 chr18 8856501 8856534 -77132400 + (A)n Simple_repeat Simple_repeat 1 33 0 3774 148 51 21 chr18 8856534 8857215 -77131719 + L1MB8 LINE L1 5476 6177 -1 726 250 43 5 chr18 8857523 8857711 -77131223 + MIR SINE MIR 46 240 -22 662 268 36 21 chr18 8858023 8858217 -77130717 - MIR SINE MIR -35 227 31 2424 91 0 0 chr18 8858707 8859005 -77129929 - AluSx SINE Alu -14 298 1 23 54 0 0 chr18 8860163 8860200 -77128734 + AT_rich Low_complexity Low_complexity 1 37 0 2354 106 3 0 chr18 8860456 8860767 -77128167 - AluSq SINE Alu -1 312 1 510 52 0 0 chr18 8861269 8861327 -77127607 + AluS SINE Alu 14 71 -242 269 315 51 55 chr18 8862970 8863205 -77125729 - MIR SINE MIR -1 261 28 427 290 22 62 chr18 8863424 8863648 -77125286 - L1M4 LINE L1 -2848 3298 3084 1732 268 29 18 chr18 8864172 8864725 -77124209 - L1ME3A LINE L1 0 6170 5612 898 231 12 0 chr18 8865167 8865336 -77123598 - FAM SINE Alu -4 171 1 376 283 151 0 chr18 8866096 8866262 -77122672 - MIR SINE MIR -38 224 34 674 198 9 0 chr18 8866975 8867091 -77121843 + FLAM_A SINE Alu 1 117 -16 23 0 0 0 chr18 8867102 8867125 -77121809 + AT_rich Low_complexity Low_complexity 1 23 0 911 265 170 16 chr18 8867255 8867803 -77121131 + L2 LINE L2 2703 3312 -1 313 351 44 9 chr18 8868539 8868653 -77120281 - MIR SINE MIR -63 145 28 245 284 34 0 chr18 8869744 8869832 -77119102 + L2 LINE L2 3223 3313 0 315 0 0 0 chr18 8870005 8870040 -77118894 + (TATAA)n Simple_repeat Simple_repeat 1 35 0 478 230 61 61 chr18 8870685 8870850 -77118084 + MLT1J1 LTR MaLR 40 204 -242 250 317 48 14 chr18 8870889 8871034 -77117900 + MLT1J2 LTR MaLR 299 448 -2 180 77 0 0 chr18 8871164 8871190 -77117744 + (TAAAAA)n Simple_repeat Simple_repeat 2 27 0 390 291 112 88 chr18 8871194 8872097 -77116837 + HAL1 LINE L1 95 1019 -1488 806 229 139 10 chr18 8872126 8872427 -77116507 + L1MCc LINE L1 21 360 -6063 1547 195 0 0 chr18 8872533 8872790 -77116144 + AluSx SINE Alu 1 257 -55 726 239 51 130 chr18 8872796 8873182 -77115752 + L1MCc LINE L1 2191 2471 -4651 1891 169 7 0 chr18 8873182 8873490 -77115444 + AluSx SINE Alu 2 311 -1 726 239 51 130 chr18 8873490 8873970 -77114964 + L1MCc LINE L1 2471 2988 -4134 1211 233 54 25 chr18 8873975 8874517 -77114417 + L1MCc LINE L1 3031 3613 -3328 676 270 32 11 chr18 8874506 8874791 -77114143 + L1MCc LINE L1 4264 4554 -2387 * 1426 175 22 0 chr18 8874791 8875020 -77113914 - AluJo SINE Alu -76 236 3 1747 216 84 12 chr18 8875083 8875765 -77113169 + L1MB5 LINE L1 4747 5472 -706 312 231 97 81 chr18 8875788 8875974 -77112960 + HAL1 LINE L1 1402 1590 -917 337 215 144 5 chr18 8875978 8876173 -77112761 + HAL1 LINE L1 1974 2195 -312 6675 204 41 18 chr18 8876361 8877129 -77111805 - L1 LINE L1 -824 5322 4573 5375 122 21 6 chr18 8877129 8878571 -77110363 - L1PA15 LINE L1 -5 6160 4713 6675 204 41 18 chr18 8878571 8879602 -77109332 - L1 LINE L1 -1573 4573 3481 23 33 0 0 chr18 8879622 8879652 -77109282 + AT_rich Low_complexity Low_complexity 1 30 0 13286 44 0 6 chr18 8879971 8882380 -77106554 + L1PA6 LINE L1 3736 6144 -10 2187 221 8 8 chr18 8882392 8882907 -77106027 + L1MB5 LINE L1 5652 6166 -8 1530 233 50 14 chr18 8882909 8883406 -77105528 + L1M4 LINE L1 4398 4912 -1234 2392 104 0 0 chr18 8884504 8884813 -77104121 - AluSx SINE Alu -2 310 2 2472 58 0 0 chr18 8885310 8885602 -77103332 + AluY SINE Alu 1 292 -19 2778 10 0 0 chr18 8886118 8886419 -77102515 + AluYa5 SINE Alu 1 301 -10 63 36 0 0 chr18 8887426 8887510 -77101424 + AT_rich Low_complexity Low_complexity 1 84 0 211 323 19 56 chr18 8887730 8887891 -77101043 - MIR SINE MIR -46 216 62 573 51 0 13 chr18 8888570 8888649 -77100285 + MADE1 DNA Mariner 1 78 -2 345 284 115 46 chr18 8889212 8889567 -77099367 + L2 LINE L2 2847 3311 -2 25 31 0 0 chr18 8890063 8890095 -77098839 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr18 8891159 8891180 -77097754 + AT_rich Low_complexity Low_complexity 1 21 0 754 175 11 0 chr18 8891711 8891981 -77096953 + L1MA7 LINE L1 5912 6290 -1 1792 104 112 0 chr18 8891992 8892251 -77096683 - AluSg SINE Alu -22 288 1 268 287 110 47 chr18 8892487 8892641 -77096293 - L1M4 LINE L1 -926 5220 5077 2190 133 0 3 chr18 8892641 8892949 -77095985 - AluSx SINE Alu -5 307 1 268 287 110 47 chr18 8892949 8893202 -77095732 - L1M4 LINE L1 -1069 5077 4787 2232 109 3 0 chr18 8893681 8893974 -77094960 + AluSx SINE Alu 1 294 -18 563 249 27 75 chr18 8894176 8894510 -77094424 - L1MC4 LINE L1 -178 7864 7547 1026 392 7 59 chr18 8894525 8894831 -77094103 - AluSx SINE Alu -2 310 21 721 208 52 19 chr18 8894844 8895056 -77093878 - L1MC4 LINE L1 -502 7540 7322 1197 277 124 24 chr18 8895111 8895898 -77093036 - L1MC4a LINE L1 -1190 6618 5753 287 263 42 59 chr18 8896917 8897035 -77091899 - MIR SINE MIR -69 139 24 426 225 72 9 chr18 8898513 8898624 -77090310 - MIR SINE MIR -32 230 113 29 47 0 0 chr18 8898726 8898769 -77090165 + AT_rich Low_complexity Low_complexity 1 43 0 2320 91 0 3 chr18 8899084 8899382 -77089552 + AluSx SINE Alu 1 297 -15 387 263 140 53 chr18 8899905 8899976 -77088958 - MIR SINE MIR -12 250 187 2296 82 0 0 chr18 8899976 8900279 -77088655 + AluSc SINE Alu 1 303 0 387 263 140 53 chr18 8900279 8900434 -77088500 - MIR SINE MIR -75 187 3 244 381 41 26 chr18 8900435 8900629 -77088305 - L2 LINE L2 -680 2634 2438 207 0 0 0 chr18 8901467 8901490 -77087444 + (T)n Simple_repeat Simple_repeat 1 23 0 224 273 39 47 chr18 8904105 8904233 -77084701 - MIR SINE MIR -29 233 107 203 323 10 31 chr18 8904567 8904663 -77084271 - L2 LINE L2 -1565 1749 1656 2494 80 3 0 chr18 8904687 8904999 -77083935 - AluSp SINE Alu 0 313 1 568 107 0 0 chr18 8906320 8906404 -77082530 - L1P4 LINE L1 -406 5760 5677 1348 70 10 0 chr18 8906405 8906606 -77082328 - L1P4 LINE L1 -648 5518 5316 188 108 0 27 chr18 8906621 8906658 -77082276 + (TTCTCC)n Simple_repeat Simple_repeat 4 39 0 4512 209 15 7 chr18 8906663 8907771 -77081163 - L1P4 LINE L1 -813 5333 4217 226 276 67 19 chr18 8909590 8909695 -77079239 - MER5A DNA MER1_type -3 186 77 2054 125 13 3 chr18 8910043 8910346 -77078588 + AluSc SINE Alu 1 306 -3 512 271 91 15 chr18 8910635 8910834 -77078100 - MIR SINE MIR 0 262 49 326 197 48 88 chr18 8911459 8911552 -77077382 + L1ME4a LINE L1 5520 5606 -515 2255 115 0 0 chr18 8911552 8911848 -77077086 + AluSq SINE Alu 1 296 -17 326 197 48 88 chr18 8911848 8911901 -77077033 + L1ME4a LINE L1 5606 5660 -461 354 267 87 81 chr18 8911964 8912357 -77076577 + L1ME4a LINE L1 5725 6119 -2 1987 145 44 17 chr18 8912748 8913154 -77075780 + L1MA7 LINE L1 5875 6291 0 189 174 65 0 chr18 8913201 8913247 -77075687 - L2 LINE L2 0 3313 3265 242 239 145 51 chr18 8913275 8913413 -77075521 + L1ME4a LINE L1 5952 6102 -19 2123 125 7 0 chr18 8913693 8914018 -77074916 + AluSx SINE Alu 1 327 0 190 287 158 20 chr18 8915073 8915174 -77073760 + L2 LINE L2 3192 3306 -7 2258 99 0 3 chr18 8915176 8915468 -77073466 + AluSq SINE Alu 3 293 -20 23 54 0 0 chr18 8915781 8915818 -77073116 + AT_rich Low_complexity Low_complexity 1 37 0 186 133 0 0 chr18 8915865 8915895 -77073039 + (TG)n Simple_repeat Simple_repeat 1 30 0 2283 92 16 0 chr18 8916232 8916537 -77072397 + AluY SINE Alu 2 311 0 184 317 0 49 chr18 8917442 8917524 -77071410 - L2 LINE L2 -100 3172 3095 922 178 17 128 chr18 8918078 8918438 -77070496 + L1MA7 LINE L1 5972 6291 0 646 232 42 0 chr18 8920848 8920990 -77067944 + MER5A DNA MER1_type 42 189 0 849 196 21 42 chr18 8921091 8921280 -77067654 + MER5A DNA MER1_type 5 189 0 188 354 15 0 chr18 8921483 8921548 -77067386 - L2 LINE L2 -529 2785 2720 327 289 181 31 chr18 8921919 8922344 -77066590 - L2 LINE L2 -939 2375 1887 1578 129 39 23 chr18 8922769 8923297 -77065637 + MER4A LTR ERV1 1 660 -4 266 339 32 32 chr18 8923299 8923423 -77065511 - L2 LINE L2 -27 3286 3163 510 247 32 50 chr18 8923516 8923735 -77065199 - L2 LINE L2 -5 3308 3094 338 290 1 14 chr18 8923778 8923932 -77065002 + L1MDa LINE L1 1803 1997 -4588 1648 21 0 0 chr18 8924037 8924228 -77064706 + L1PA2 LINE L1 5959 6149 -6 305 303 67 45 chr18 8924264 8924442 -77064492 - L1M4 LINE L1 -1188 4958 4777 344 293 42 32 chr18 8924556 8924867 -77064067 - L1M4 LINE L1 -1628 4518 4205 297 185 0 0 chr18 8924922 8924987 -77063947 + (TA)n Simple_repeat Simple_repeat 2 66 0 228 307 68 62 chr18 8924988 8925519 -77063415 - L1M4 LINE L1 -1949 4197 3664 203 146 24 0 chr18 8926249 8926290 -77062644 + GA-rich Low_complexity Low_complexity 6 47 0 2051 197 64 17 chr18 8927501 8927983 -77060951 + MLT1D LTR MaLR 1 505 0 476 341 94 66 chr18 8929076 8929874 -77059060 - L2 LINE L2 -2 3270 2466 27 29 0 0 chr18 8930414 8930448 -77058486 + AT_rich Low_complexity Low_complexity 1 34 0 522 293 16 64 chr18 8930601 8930789 -77058145 - MIR SINE MIR -50 212 34 526 233 12 82 chr18 8932209 8932454 -77056480 + L1MC4 LINE L1 6463 6690 -1352 1548 160 21 4 chr18 8932454 8932735 -77056199 + MER65C LTR ERV1 1 286 -175 333 0 0 0 chr18 8932743 8932780 -77056154 + (TTA)n Simple_repeat Simple_repeat 2 38 0 998 92 8 0 chr18 8932784 8932915 -77056019 - AluSc SINE Alu -29 280 149 2437 68 0 0 chr18 8933017 8933311 -77055623 - AluY SINE Alu -17 294 1 901 109 16 65 chr18 8933311 8933363 -77055571 + MER65C LTR ERV1 276 329 -132 2227 107 7 10 chr18 8933363 8933700 -77055234 + AluSx SINE Alu 1 312 0 901 109 16 65 chr18 8933700 8933831 -77055103 + MER65C LTR ERV1 329 450 -11 286 102 0 61 chr18 8934348 8934397 -77054537 + LTR57-int LTR ERVL 303 348 -4995 612 276 25 15 chr18 8934692 8934888 -77054046 + MER34 LTR ERV1 65 262 -280 320 111 79 0 chr18 8934966 8935029 -77053905 + MER65-int LTR ERV1 1561 1628 -3243 1260 184 5 5 chr18 8935030 8935242 -77053692 + AluJo SINE Alu 89 300 -12 2747 205 49 26 chr18 8935260 8936093 -77052841 + MER65-int LTR ERV1 1643 2494 -2377 364 155 25 42 chr18 8936201 8936310 -77052624 + MER65-int LTR ERV1 2409 3838 -2509 466 286 28 32 chr18 8936328 8936571 -77052363 + MER65-int LTR ERV1 2337 4184 -2550 1204 166 85 94 chr18 8936814 8937095 -77051839 + MER65-int LTR ERV1 3499 3781 -2550 1743 176 30 3 chr18 8937095 8937397 -77051537 - AluJo SINE Alu -2 310 1 1204 166 85 94 chr18 8937397 8937692 -77051242 + MER65-int LTR ERV1 3781 4092 -2239 2250 120 0 7 chr18 8937699 8938008 -77050926 - AluSx SINE Alu -4 308 2 1086 265 60 9 chr18 8938014 8938346 -77050588 + MER65-int LTR ERV1 3680 4028 -843 3408 152 26 2 chr18 8938545 8939171 -77049763 + L1 LINE L1 4657 5297 -849 401 249 47 12 chr18 8939178 8939347 -77049587 + L1MA4 LINE L1 6126 6300 0 2324 176 6 38 chr18 8939861 8940337 -77048597 + MER65C LTR ERV1 1 461 0 1470 195 92 8 chr18 8940344 8940714 -77048220 + L1MC4 LINE L1 6676 7076 -966 2185 236 52 10 chr18 8940736 8941354 -77047580 + L1MC4 LINE L1 7259 7902 -140 243 0 0 0 chr18 8941895 8941922 -77047012 + (CAAAA)n Simple_repeat Simple_repeat 1 27 0 2003 136 7 0 chr18 8942173 8942492 -77046442 + AluSq SINE Alu 1 321 0 360 0 0 0 chr18 8942491 8942531 -77046403 + (TC)n Simple_repeat Simple_repeat 2 41 0 216 0 0 0 chr18 8942530 8942554 -77046380 + (TA)n Simple_repeat Simple_repeat 1 24 0 * 760 115 16 0 chr18 8942966 8943088 -77045846 + MSTA LTR MaLR 1 124 -304 1234 175 34 11 chr18 8944475 8944744 -77044190 + L1MD3 LINE L1 7721 7995 0 454 278 100 56 chr18 8945005 8945545 -77043389 - L1ME4a LINE L1 -240 5881 5318 2240 85 0 3 chr18 8945777 8946059 -77042875 + AluSq SINE Alu 1 281 -32 228 35 0 0 chr18 8946059 8946088 -77042846 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 282 303 76 42 chr18 8946623 8946742 -77042192 + MIR SINE MIR 22 144 -118 1812 164 0 7 chr18 8946865 8947158 -77041776 - AluJb SINE Alu -21 291 1 529 281 171 20 chr18 8949289 8949680 -77039254 + Charlie7 DNA MER1_type 20 469 -2143 787 245 92 54 chr18 8949749 8949889 -77039045 + Charlie7 DNA MER1_type 1759 1892 -720 1941 141 0 27 chr18 8949889 8950187 -77038747 + AluSg SINE Alu 1 290 -20 787 245 92 54 chr18 8950187 8950303 -77038631 + Charlie7 DNA MER1_type 1892 2002 -610 2163 115 16 13 chr18 8950303 8950607 -77038327 - AluSx SINE Alu -7 305 1 787 245 92 54 chr18 8950607 8950794 -77038140 + Charlie7 DNA MER1_type 2002 2220 -392 332 265 0 29 chr18 8950808 8950910 -77038024 - MER81 DNA DNA -15 99 1 2091 83 0 7 chr18 8950949 8951226 -77037708 + AluSq SINE Alu 34 308 -5 366 305 177 7 chr18 8951631 8951772 -77037162 - MER5A DNA MER1_type -16 173 9 682 299 16 16 chr18 8952398 8952582 -77036352 + MIR3 SINE MIR 10 193 -15 454 309 16 43 chr18 8953952 8954140 -77034794 - MIR3 SINE MIR -24 184 2 2344 86 0 20 chr18 8954336 8954638 -77034296 + AluSc SINE Alu 1 296 -13 546 275 97 51 chr18 8955488 8955859 -77033075 + L1MC4a LINE L1 5510 5897 -1911 1109 144 33 0 chr18 8957126 8957307 -77031627 - MER5A DNA MER1_type 0 189 3 1573 148 22 26 chr18 8958011 8958322 -77030612 + MLT2D LTR ERVL 68 377 -37 216 320 62 51 chr18 8959505 8959680 -77029254 + L2 LINE L2 2262 2438 -876 555 320 33 0 chr18 8959680 8959861 -77029073 + MER91A DNA MER1_type 1 187 -9 402 353 74 41 chr18 8960058 8960421 -77028513 + L2 LINE L2 2888 3262 -10 441 0 0 0 chr18 8961221 8961270 -77027664 + (TAGA)n Simple_repeat Simple_repeat 3 51 0 297 318 8 8 chr18 8962099 8962225 -77026709 - MER94 DNA DNA -8 126 1 482 288 133 9 chr18 8962588 8962821 -77026113 - MIR SINE MIR 0 262 1 1163 254 13 16 chr18 8963215 8963595 -77025339 + L1PBa LINE L1 1345 1633 -5230 * 9192 221 38 25 chr18 8963577 8964186 -77024748 + L1PB3 LINE L1 12 612 -5591 252 0 0 0 chr18 8964186 8964214 -77024720 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 9192 221 38 25 chr18 8964214 8968588 -77020346 + L1PB3 LINE L1 612 5372 -831 3765 127 48 5 chr18 8968589 8969229 -77019705 + L1PB3 LINE L1 5542 6209 -2 301 133 0 40 chr18 8969241 8969261 -77019673 + (GGAAA)n Simple_repeat Simple_repeat 3 22 -52 1280 196 82 14 chr18 8969261 8969542 -77019392 + AluJb SINE Alu 5 304 -8 301 133 0 40 chr18 8969542 8969596 -77019338 + (GGAAA)n Simple_repeat Simple_repeat 22 74 0 * 672 119 0 0 chr18 8969585 8969694 -77019240 + (GGAA)n Simple_repeat Simple_repeat 3 111 0 1324 114 14 14 chr18 8969694 8969904 -77019030 + L1MA2 LINE L1 5652 5861 -444 767 112 40 0 chr18 8969906 8970031 -77018903 + L1MA2 LINE L1 5979 6108 -196 2552 121 78 5 chr18 8970033 8970430 -77018504 + MSTA LTR MaLR 3 428 0 6732 172 34 19 chr18 8970430 8971674 -77017260 + MSTA-int LTR MaLR 1 1262 -389 282 246 88 79 chr18 8971904 8972018 -77016916 + MLT1H LTR MaLR 424 538 -11 814 223 99 4 chr18 8972018 8972260 -77016674 + L1ME3A LINE L1 5300 5564 -600 383 245 72 31 chr18 8972366 8972542 -77016392 + L1ME3A LINE L1 5717 5912 -252 738 194 0 0 chr18 8972542 8972666 -77016268 - FLAM_A SINE Alu -9 124 1 383 245 72 31 chr18 8972666 8972704 -77016230 + L1ME3A LINE L1 5912 5947 -217 217 357 0 0 chr18 8974028 8974098 -77014836 - MIR SINE MIR -25 237 168 780 260 113 58 chr18 8974194 8974724 -77014210 + L1ME3A LINE L1 5374 5932 -238 293 328 0 0 chr18 8975471 8975532 -77013402 - MIR SINE MIR -103 105 45 1290 239 70 82 chr18 8976114 8976324 -77012610 - L1ME3A LINE L1 -13 6157 5946 2505 71 0 0 chr18 8976324 8976635 -77012299 - AluY SINE Alu 0 311 1 1290 239 70 82 chr18 8976635 8976680 -77012254 - L1ME3A LINE L1 -224 5946 5902 2483 108 55 26 chr18 8976680 8977096 -77011838 - MSTC LTR MaLR 0 428 1 1290 239 70 82 chr18 8977096 8977394 -77011540 - L1ME3A LINE L1 -268 5902 5610 1735 202 52 42 chr18 8977394 8977894 -77011040 - MLT1D LTR MaLR 0 505 1 480 288 97 68 chr18 8978630 8979127 -77009807 + L1MEd LINE L1 640 1150 -4969 223 389 56 7 chr18 8979141 8979285 -77009649 - L2 LINE L2 -63 3209 3059 708 297 66 18 chr18 8979624 8980033 -77008901 + MLT1K LTR MaLR 137 586 -2 198 103 0 0 chr18 8980052 8980081 -77008853 + (CAG)n Simple_repeat Simple_repeat 2 30 0 22 94 0 0 chr18 8980246 8980310 -77008624 + AT_rich Low_complexity Low_complexity 1 64 0 2367 81 0 7 chr18 8980475 8980773 -77008161 + AluSc SINE Alu 1 296 -13 1504 268 113 28 chr18 8981204 8981849 -77007085 + HsTC2a DNA Tc2 24 723 -21 2199 130 0 0 chr18 8982262 8982570 -77006364 - AluSx SINE Alu -1 311 4 2056 133 35 37 chr18 8982752 8983128 -77005806 + THE1C LTR MaLR 1 375 0 514 257 165 58 chr18 8983958 8984460 -77004474 + L1MEc LINE L1 797 1222 -4983 1180 265 107 30 chr18 8984466 8984934 -77004000 + L1ME3A LINE L1 5644 6147 -23 353 294 19 77 chr18 8984963 8985340 -77003594 + L1MEc LINE L1 1353 1707 -4689 286 191 0 36 chr18 8985340 8985424 -77003510 + GA-rich Low_complexity Low_complexity 4 84 0 351 296 51 0 chr18 8985444 8985542 -77003392 + L1MEc LINE L1 1715 1817 -4579 2030 266 89 38 chr18 8985739 8987322 -77001612 + L1MEc LINE L1 2157 3791 -2424 13018 218 46 33 chr18 8987350 8990564 -76998370 + L1MA10 LINE L1 1 3171 -3227 2277 90 10 7 chr18 8990564 8990864 -76998070 + AluY SINE Alu 1 301 -10 13018 218 46 33 chr18 8990864 8992270 -76996664 + L1MA10 LINE L1 3171 4557 -1841 1691 119 7 90 chr18 8992270 8992611 -76996323 + AluSx SINE Alu 1 315 0 13018 218 46 33 chr18 8992611 8993286 -76995648 + L1MA10 LINE L1 4557 5222 -1176 303 71 0 0 chr18 8993286 8993328 -76995606 + (TA)n Simple_repeat Simple_repeat 2 43 0 13018 218 46 33 chr18 8993328 8994705 -76994229 + L1MA10 LINE L1 5222 6382 -16 2489 268 88 29 chr18 8994699 8996629 -76992305 + L1MEc LINE L1 3899 5984 -255 * 1641 178 38 7 chr18 8996629 8996921 -76992013 + AluJo SINE Alu 1 301 -11 2489 268 88 29 chr18 8996921 8997188 -76991746 + L1MEc LINE L1 5984 6234 -5 3936 177 44 11 chr18 8997202 8998092 -76990842 + L1MB4 LINE L1 4904 5840 -340 1982 129 0 17 chr18 8998092 8998386 -76990548 + AluSx SINE Alu 1 289 -23 3936 177 44 11 chr18 8998386 8998612 -76990322 + L1MB4 LINE L1 5840 6057 -123 3000 159 20 2 chr18 8998712 8998916 -76990018 + L1MB3 LINE L1 5625 5824 -359 2072 123 0 14 chr18 8998916 8999209 -76989725 + AluSx SINE Alu 1 289 -23 3000 159 20 2 chr18 8999209 8999546 -76989388 + L1MB3 LINE L1 5824 6176 -7 2622 37 0 0 chr18 8999558 8999857 -76989077 - AluY SINE Alu -12 299 1 466 119 0 0 chr18 8999867 8999934 -76989000 - FLAM SINE Alu -18 125 59 759 195 15 10 chr18 9000039 9000234 -76988700 + L1MA7 LINE L1 6095 6290 -1 643 168 18 0 chr18 9003180 9003293 -76985641 - FLAM_C SINE Alu -20 123 9 365 257 26 26 chr18 9003906 9004019 -76984915 + LTR67 LTR ERVL 63 175 -382 6168 137 12 3 chr18 9004818 9006478 -76982456 + L1MA2 LINE L1 4197 5873 -431 1017 114 0 0 chr18 9006503 9006652 -76982282 + L1MA2 LINE L1 6156 6304 0 2513 126 135 4 chr18 9007745 9008205 -76980729 - Tigger3(Golem) DNA MER2_type -1 3028 2509 900 185 0 77 chr18 9008211 9008406 -76980528 - Tigger3(Golem) DNA MER2_type -2848 181 2 298 298 9 79 chr18 9009410 9009524 -76979410 + MIR3 SINE MIR 83 188 -20 327 250 106 19 chr18 9009595 9009699 -76979235 - MIR3 SINE MIR -51 157 45 1938 136 52 0 chr18 9010493 9010779 -76978155 + AluSx SINE Alu 1 301 -11 1742 171 3 7 chr18 9011403 9011696 -76977238 + AluJo SINE Alu 1 292 -20 1402 174 3 104 chr18 9012026 9012354 -76976580 + AluJo SINE Alu 7 301 -11 208 277 0 0 chr18 9012392 9012439 -76976495 + (CAG)n Simple_repeat Simple_repeat 2 48 0 194 352 11 11 chr18 9012518 9012606 -76976328 - MIR SINE MIR -155 107 20 1494 180 71 3 chr18 9013159 9013442 -76975492 + AluJo SINE Alu 1 302 -10 368 168 28 28 chr18 9013442 9013549 -76975385 + G-rich Low_complexity Low_complexity 4 110 0 519 175 16 16 chr18 9013551 9013677 -76975257 + A-rich Low_complexity Low_complexity 1 126 0 324 357 1 11 chr18 9013890 9014016 -76974918 - MIR SINE MIR -82 126 3 628 309 86 0 chr18 9014877 9015110 -76973824 - MIR SINE MIR -2 260 8 331 269 0 0 chr18 9015303 9015370 -76973564 + Charlie1 DNA MER1_type 5 71 -2690 * 1798 192 25 7 chr18 9015368 9015775 -76973159 + Charlie1 DNA MER1_type 2343 2756 -5 24 0 0 0 chr18 9016271 9016295 -76972639 + AT_rich Low_complexity Low_complexity 1 24 0 22 56 0 0 chr18 9017467 9017503 -76971431 + AT_rich Low_complexity Low_complexity 1 36 0 192 246 46 0 chr18 9019164 9019229 -76969705 - MIR SINE MIR -63 199 132 587 192 51 26 chr18 9019785 9019941 -76968993 - MIR SINE MIR -19 243 84 2283 105 0 7 chr18 9020075 9020379 -76968555 + AluSx SINE Alu 1 302 -10 752 197 0 7 chr18 9020658 9020800 -76968134 + MER20 DNA MER1_type 78 218 -1 2365 106 0 0 chr18 9021171 9021474 -76967460 + AluSx SINE Alu 5 307 -5 25 0 0 0 chr18 9022125 9022150 -76966784 + AT_rich Low_complexity Low_complexity 1 25 0 726 231 36 36 chr18 9022350 9022571 -76966363 - MER58A DNA MER1_type -3 221 1 1274 221 24 106 chr18 9023296 9023789 -76965145 + LTR40c LTR ERVL 1 453 -12 384 244 16 49 chr18 9023912 9024035 -76964899 - MER94 DNA DNA -15 119 1 636 278 26 0 chr18 9025402 9025596 -76963338 + MIR SINE MIR 31 229 -33 243 292 0 14 chr18 9026862 9026934 -76962000 + L2 LINE L2 3241 3311 -2 396 327 56 34 chr18 9027219 9027696 -76961238 + L2 LINE L2 2722 3213 -100 1840 158 13 10 chr18 9027696 9027994 -76960940 + AluJb SINE Alu 1 299 -13 396 327 56 34 chr18 9027994 9028094 -76960840 + L2 LINE L2 3213 3309 -4 34121 101 8 53 chr18 9028557 9035005 -76953929 - L1PA7 LINE L1 0 6154 12 299 305 9 17 chr18 9035197 9035343 -76953591 + MER5A DNA MER1_type 47 178 0 233 237 0 31 chr18 9035495 9035592 -76953342 + (CATATA)n Simple_repeat Simple_repeat 3 96 0 1001 199 59 70 chr18 9035823 9036095 -76952839 + MLT1F1 LTR MaLR 6 274 -293 1792 180 0 0 chr18 9036359 9036654 -76952280 + AluJo SINE Alu 1 295 -17 779 274 222 14 chr18 9037644 9038355 -76950579 - L2 LINE L2 -1 3312 2442 387 248 8 17 chr18 9039228 9039345 -76949589 + L1ME LINE L1 5367 5482 -682 24 32 0 0 chr18 9040305 9040336 -76948598 + AT_rich Low_complexity Low_complexity 1 31 0 13090 193 34 21 chr18 9040336 9042992 -76945942 + L1PB3 LINE L1 2443 5062 -1800 252 0 0 0 chr18 9042992 9043020 -76945914 + (CTA)n Simple_repeat Simple_repeat 1 28 0 13090 193 34 21 chr18 9043020 9043506 -76945428 + L1PB3 LINE L1 5062 5540 -1322 2124 134 0 7 chr18 9043506 9043804 -76945130 + AluSx SINE Alu 1 296 -16 13090 193 34 21 chr18 9043804 9044043 -76944891 + L1PB3 LINE L1 5540 5876 -986 1625 169 3 7 chr18 9044043 9044324 -76944610 + L1PB3 LINE L1 6582 6870 0 235 273 30 0 chr18 9044710 9044776 -76944158 - MIR SINE MIR -6 256 189 836 250 182 48 chr18 9044783 9045425 -76943509 + L2 LINE L2 2383 3163 -150 2291 128 0 0 chr18 9045425 9045737 -76943197 + AluSx SINE Alu 1 312 0 836 250 182 48 chr18 9045737 9045911 -76943023 + L2 LINE L2 3163 3312 -1 22 35 0 0 chr18 9045961 9045990 -76942944 + AT_rich Low_complexity Low_complexity 1 29 0 647 164 53 66 chr18 9046297 9046449 -76942485 + AluJb SINE Alu 137 286 -26 22 0 0 0 chr18 9046449 9046471 -76942463 + AT_rich Low_complexity Low_complexity 1 22 0 213 235 0 0 chr18 9048038 9048089 -76940845 - MIR SINE MIR -44 218 168 1942 149 3 34 chr18 9048806 9049127 -76939807 + AluJo SINE Alu 1 311 -1 475 138 11 11 chr18 9049346 9049433 -76939501 + AluJ/FRAM SINE Alu 214 300 -12 21 0 0 0 chr18 9049981 9050002 -76938932 + GC_rich Low_complexity Low_complexity 1 21 0 2022 133 7 0 chr18 9050399 9050701 -76938233 + AluSg SINE Alu 3 306 -4 1862 177 0 7 chr18 9051656 9051950 -76936984 - AluJb SINE Alu -19 293 2 229 396 0 0 chr18 9053492 9053593 -76935341 + L3 LINE CR1 1460 1560 -17 1517 254 51 74 chr18 9054282 9054949 -76933985 + MER20B DNA MER1_type 98 750 -33 4015 89 2 2 chr18 9054949 9055490 -76933444 + L1PB2 LINE L1 5606 6146 -5 1517 254 51 74 chr18 9055490 9055524 -76933410 + MER20B DNA MER1_type 750 783 0 1788 163 3 31 chr18 9055914 9056233 -76932701 - AluJo SINE Alu 0 312 3 618 206 57 91 chr18 9057790 9057999 -76930935 + MER20 DNA MER1_type 18 219 0 244 226 48 0 chr18 9058978 9059040 -76929894 - L2 LINE L2 -19 3253 3189 2149 124 16 0 chr18 9059909 9060216 -76928718 - AluSx SINE Alu 0 312 1 327 266 101 21 chr18 9061086 9061323 -76927611 + L2 LINE L2 2383 2638 -676 200 324 40 0 chr18 9061625 9061699 -76927235 + L2 LINE L2 3137 3213 -59 1743 97 35 0 chr18 9063231 9063488 -76925446 - L1PA13 LINE L1 -4 6159 5894 967 168 37 37 chr18 9064151 9064342 -76924592 + AluJb SINE Alu 110 300 -12 24 32 0 0 chr18 9065813 9065844 -76923090 + GC_rich Low_complexity Low_complexity 1 31 0 32 95 0 0 chr18 9066126 9066221 -76922713 + GC_rich Low_complexity Low_complexity 1 95 0 201 300 29 29 chr18 9066637 9066707 -76922227 - L2 LINE L2 -45 3268 3199 2305 106 6 0 chr18 9067204 9067515 -76921419 + AluSq SINE Alu 1 313 0 1747 181 3 13 chr18 9068762 9069072 -76919862 - AluJb SINE Alu -5 307 1 1232 164 5 0 chr18 9069155 9069350 -76919584 - AluJb SINE Alu -12 300 105 744 209 0 0 chr18 9069747 9069886 -76919048 - FLAM_C SINE Alu -2 141 3 14251 124 11 43 chr18 9070434 9070552 -76918382 - Tigger1 DNA MER2_type 0 2418 2298 7888 14 0 0 chr18 9070552 9071637 -76917297 + L1PA3 LINE L1 5071 6155 0 14251 124 11 43 chr18 9071637 9072160 -76916774 - Tigger1 DNA MER2_type -120 2298 1760 1374 174 35 61 chr18 9072160 9072471 -76916463 - AluJo SINE Alu -9 303 1 14251 124 11 43 chr18 9072471 9074327 -76914607 - Tigger1 DNA MER2_type -658 1760 1 5651 142 61 54 chr18 9075568 9076149 -76912785 + Tigger3b DNA MER2_type 1 576 -2452 1580 134 10 80 chr18 9076149 9076448 -76912486 + AluJo SINE Alu 17 294 -18 180 0 0 0 chr18 9076448 9076468 -76912466 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 5651 142 61 54 chr18 9076468 9077107 -76911827 + Tigger3b DNA MER2_type 575 1231 0 391 252 65 0 chr18 9077110 9077217 -76911717 + MER21B LTR ERV1 1 114 -749 1156 233 83 32 chr18 9077238 9077611 -76911323 + MER21B LTR ERV1 391 782 -81 2347 154 199 11 chr18 9077811 9078358 -76910576 - LTR51 LTR ERV1 0 671 22 476 273 192 48 chr18 9078415 9078895 -76910039 + MLT1H LTR MaLR 1 549 0 722 173 8 8 chr18 9079014 9079147 -76909787 + FLAM_C SINE Alu 1 133 0 1728 187 0 0 chr18 9079618 9079918 -76909016 - AluJo SINE Alu -12 300 1 206 32 32 0 chr18 9081076 9081107 -76907827 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1912 91 47 11 chr18 9081110 9081384 -76907550 - AluSx SINE Alu -28 284 1 1708 175 3 17 chr18 9081910 9082202 -76906732 - AluJo SINE Alu -24 288 1 2096 136 0 19 chr18 9082211 9082527 -76906407 - AluSx SINE Alu -2 310 1 444 282 94 64 chr18 9082547 9082813 -76906121 - L1M4 LINE L1 -1997 4149 3876 549 147 0 0 chr18 9083428 9083523 -76905411 + (TG)n Simple_repeat Simple_repeat 2 96 0 2273 92 0 10 chr18 9084343 9084646 -76904288 - AluSx SINE Alu -12 300 1 29 70 0 0 chr18 9085269 9085326 -76903608 + AT_rich Low_complexity Low_complexity 1 57 0 1265 175 71 12 chr18 9085387 9085639 -76903295 - AluJo SINE Alu -12 300 34 22 0 0 0 chr18 9086147 9086169 -76902765 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr18 9086988 9087010 -76901924 + AT_rich Low_complexity Low_complexity 1 22 0 395 270 68 77 chr18 9087075 9087316 -76901618 - L1ME LINE L1 -319 5851 5619 711 194 7 14 chr18 9087477 9087621 -76901313 - FLAM_C SINE Alu 0 143 1 886 125 0 15 chr18 9087902 9088038 -76900896 - FLAM_C SINE Alu -2 141 8 2430 82 10 0 chr18 9088276 9088580 -76900354 - AluSg SINE Alu -3 307 1 267 271 8 34 chr18 9088803 9088921 -76900013 + (TA)n Simple_repeat Simple_repeat 1 115 0 254 311 79 14 chr18 9089604 9089884 -76899050 - L1ME LINE L1 -805 5341 5044 283 202 67 0 chr18 9090128 9090217 -76898717 - L1ME LINE L1 -1438 4708 4614 2107 128 0 0 chr18 9090798 9091095 -76897839 + AluSg SINE Alu 1 297 -13 545 281 15 41 chr18 9091334 9091530 -76897404 + MIR SINE MIR 72 262 0 807 149 8 22 chr18 9091692 9091826 -76897108 - FLAM_C SINE Alu -1 132 1 365 216 80 24 chr18 9091873 9091998 -76896936 - L1 LINE L1 -1780 4366 4235 941 220 25 21 chr18 9092093 9092334 -76896600 - MLT1J LTR MaLR -4 507 266 305 303 136 8 chr18 9092484 9092616 -76896318 - MIR SINE MIR -3 259 111 466 118 12 12 chr18 9093045 9093130 -76895804 + (TTTC)n Simple_repeat Simple_repeat 2 86 0 311 226 46 0 chr18 9093644 9093736 -76895198 + MIR SINE MIR 81 178 -30 1687 196 98 28 chr18 9093849 9094195 -76894739 + LOR1b LTR ERV1 1 384 -77 2363 160 36 2 chr18 9094195 9094607 -76894327 + MSTB LTR MaLR 1 426 0 1687 196 98 28 chr18 9094607 9094689 -76894245 + LOR1b LTR ERV1 384 459 -2 3146 177 71 13 chr18 9095579 9096213 -76892721 - LTR51 LTR ERV1 0 671 1 690 309 25 5 chr18 9096302 9096506 -76892428 + MIR SINE MIR 29 236 -26 228 111 0 0 chr18 9096506 9096542 -76892392 + (A)n Simple_repeat Simple_repeat 1 36 0 411 119 0 0 chr18 9097593 9097660 -76891274 + (GA)n Simple_repeat Simple_repeat 2 68 0 316 345 83 34 chr18 9097776 9098040 -76890894 - L3b LINE CR1 -145 1438 1162 475 239 26 32 chr18 9098119 9098274 -76890660 + L1PB4 LINE L1 6000 6153 -3 337 270 9 26 chr18 9098481 9098596 -76890338 + MIR SINE MIR 147 259 -3 204 273 0 0 chr18 9098601 9098645 -76890289 + (TTA)n Simple_repeat Simple_repeat 1 44 0 543 367 37 7 chr18 9099804 9100101 -76888833 + L1M4 LINE L1 4040 4345 -1801 23 78 0 0 chr18 9100106 9100157 -76888777 + AT_rich Low_complexity Low_complexity 1 51 0 1068 175 0 0 chr18 9100217 9100388 -76888546 + FRAM SINE Alu 1 168 -8 623 303 75 24 chr18 9100570 9100903 -76888031 + L2 LINE L2 2897 3246 -67 22 0 0 0 chr18 9101044 9101066 -76887868 + AT_rich Low_complexity Low_complexity 1 22 0 242 243 14 0 chr18 9101539 9101609 -76887325 + (TA)n Simple_repeat Simple_repeat 1 71 0 315 0 0 0 chr18 9101629 9101664 -76887270 + (T)n Simple_repeat Simple_repeat 1 35 0 29 0 0 0 chr18 9102117 9102146 -76886788 + AT_rich Low_complexity Low_complexity 1 29 0 210 278 0 0 chr18 9102566 9102620 -76886314 + T-rich Low_complexity Low_complexity 1 54 0 23 0 0 0 chr18 9102788 9102811 -76886123 + AT_rich Low_complexity Low_complexity 1 23 0 45 26 0 39 chr18 9102870 9102948 -76885986 + AT_rich Low_complexity Low_complexity 1 75 0 759 194 7 14 chr18 9102948 9103092 -76885842 - FLAM_C SINE Alu 0 143 1 26 0 0 27 chr18 9103116 9103135 -76885799 + AT_rich Low_complexity Low_complexity 1 20 -16 1797 174 7 0 chr18 9103135 9103429 -76885505 + AluJo SINE Alu 1 296 -16 26 0 0 27 chr18 9103429 9103446 -76885488 + AT_rich Low_complexity Low_complexity 20 36 0 582 283 50 9 chr18 9104548 9104767 -76884167 + MLT1J LTR MaLR 1 228 -283 348 361 54 0 chr18 9104808 9104974 -76883960 + MLT1J LTR MaLR 300 474 -37 935 125 109 5 chr18 9105109 9105301 -76883633 + L1MA5A LINE L1 6081 6292 -5 184 222 0 44 chr18 9105547 9105592 -76883342 + L3 LINE CR1 1171 1213 -364 687 143 38 60 chr18 9106184 9106317 -76882617 + FLAM_C SINE Alu 6 135 -8 1900 161 0 0 chr18 9106458 9106743 -76882191 - AluJb SINE Alu -23 289 5 610 152 19 0 chr18 9107534 9107639 -76881295 + U6 snRNA snRNA 1 107 0 759 265 42 19 chr18 9108139 9108399 -76880535 + L2 LINE L2 1567 1832 -1482 8185 223 45 24 chr18 9108419 9108808 -76880126 - L1MB5 LINE L1 -12 6398 6019 1877 135 7 26 chr18 9108808 9109111 -76879823 - AluJb SINE Alu -10 302 6 8185 223 45 24 chr18 9109111 9111948 -76876986 - L1MB5 LINE L1 -391 6019 3074 14898 134 24 7 chr18 9111948 9114326 -76874608 + Tigger1 DNA MER2_type 1 2418 0 8185 223 45 24 chr18 9114326 9114733 -76874201 - L1MB5 LINE L1 -3336 3074 2677 4204 234 99 23 chr18 9115622 9117473 -76871461 - L1MB5 LINE L1 -3668 2714 722 1935 221 82 15 chr18 9117516 9118054 -76870880 - L1MB2 LINE L1 -2 6169 5596 1352 192 24 59 chr18 9118059 9118398 -76870536 - L1M3 LINE L1 -486 6192 5866 4832 226 107 67 chr18 9118400 9118475 -76870459 - L1M3 LINE L1 -1604 5040 4970 219 36 0 0 chr18 9118475 9118503 -76870431 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 1930 132 11 0 chr18 9118503 9118784 -76870150 - AluSx SINE Alu -28 284 1 4832 226 107 67 chr18 9118784 9118844 -76870090 - L1M3 LINE L1 -1674 4970 4914 2288 70 0 3 chr18 9118844 9119175 -76869759 - AluY SINE Alu 0 330 1 4832 226 107 67 chr18 9119175 9119794 -76869140 - L1M3 LINE L1 -1730 4914 4322 1567 202 3 14 chr18 9119794 9120086 -76868848 - AluJo SINE Alu -23 289 1 4832 226 107 67 chr18 9120086 9120354 -76868580 - L1M3 LINE L1 -2322 4322 4066 1990 137 7 3 chr18 9120354 9120653 -76868281 - AluSx SINE Alu -12 300 1 4832 226 107 67 chr18 9120653 9123671 -76865263 - L1M3 LINE L1 -2578 4066 817 449 238 109 0 chr18 9124101 9124202 -76864732 - MER81 DNA DNA 0 114 3 943 272 167 40 chr18 9124205 9124708 -76864226 + L2 LINE L2 2129 2695 -619 494 110 17 127 chr18 9124727 9124781 -76864153 - L1MB1 LINE L1 -2 6166 6130 2026 101 4 0 chr18 9124781 9125048 -76863886 - AluY SINE Alu -4 307 40 494 110 17 127 chr18 9125048 9125111 -76863823 - L1MB1 LINE L1 -38 6130 6062 3024 169 11 4 chr18 9125111 9125636 -76863298 + L1MB1 LINE L1 5496 6024 -144 257 207 73 49 chr18 9125667 9125749 -76863185 + L2 LINE L2 2756 2839 -475 579 336 86 4 chr18 9126247 9126503 -76862431 + L2 LINE L2 222 498 -2816 297 221 128 12 chr18 9126969 9127055 -76861879 - L1ME3A LINE L1 -5 6165 6070 282 264 154 9 chr18 9127166 9127276 -76861658 - L1ME3A LINE L1 -2065 5743 5618 1678 142 101 0 chr18 9127288 9127555 -76861379 - AluJo SINE Alu -18 294 1 1066 316 33 3 chr18 9127642 9128031 -76860903 - HERV16 LTR ERVL -3570 1426 1026 553 191 9 9 chr18 9128035 9128145 -76860789 + MER53 DNA DNA 3 112 -77 1402 317 61 33 chr18 9128168 9128669 -76860265 - HERV16 LTR ERVL -3963 1033 503 666 270 9 63 chr18 9128669 9128891 -76860043 + MER63A DNA MER1_type 1 210 0 1402 317 61 33 chr18 9128891 9129140 -76859794 - HERV16 LTR ERVL -4493 503 262 520 256 104 14 chr18 9129451 9129662 -76859272 - LTR16B LTR ERVL 0 464 235 273 293 111 0 chr18 9130273 9130372 -76858562 - MIR SINE MIR -22 240 131 304 365 41 38 chr18 9130483 9130825 -76858109 - L2 LINE L2 -550 2764 2422 267 86 0 0 chr18 9131715 9131750 -76857184 + L1MA9 LINE L1 4879 4913 -1233 2034 141 20 17 chr18 9131761 9132109 -76856825 + L1PA15 LINE L1 5710 6058 -107 555 144 10 19 chr18 9132231 9132335 -76856599 + L1PA15 LINE L1 6062 6164 -1 1806 194 11 52 chr18 9132345 9132783 -76856151 + L1MA9 LINE L1 4906 5325 -821 512 141 0 0 chr18 9132805 9132876 -76856058 + FLAM_A SINE Alu 36 106 -36 765 115 53 0 chr18 9132882 9132995 -76855939 + FRAM SINE Alu 56 174 -2 3766 185 48 41 chr18 9133013 9133873 -76855061 + L1MA9 LINE L1 5417 6282 -30 26 30 0 0 chr18 9133873 9133906 -76855028 + AT_rich Low_complexity Low_complexity 1 33 0 389 302 38 0 chr18 9135138 9135244 -76853690 - L2 LINE L2 -1 3312 3203 2312 101 0 0 chr18 9135983 9136291 -76852643 - AluSc SINE Alu -1 308 1 225 326 81 21 chr18 9136443 9136679 -76852255 - LTR16C LTR ERVL -9 482 233 2064 98 33 0 chr18 9138287 9138600 -76850334 - AluSq SINE Alu 0 322 1 500 243 85 43 chr18 9138820 9139055 -76849879 + L2 LINE L2 3067 3311 -2 307 308 21 49 chr18 9139337 9139480 -76849454 - L2 LINE L2 -464 2850 2712 5574 128 63 8 chr18 9140689 9141545 -76847389 + MER4D LTR ERV1 1 903 0 977 115 39 13 chr18 9142000 9142156 -76846778 + LTR39 LTR ERV1 1 160 -623 209 250 23 0 chr18 9142349 9142393 -76846541 - L2 LINE L2 -17 3296 3252 22 56 0 0 chr18 9142404 9142440 -76846494 + AT_rich Low_complexity Low_complexity 1 36 0 530 307 34 63 chr18 9142831 9143069 -76845865 + MIR SINE MIR 32 262 0 365 307 37 43 chr18 9143117 9143325 -76845609 + MIR SINE MIR 2 212 -50 553 217 42 35 chr18 9143357 9143500 -76845434 - MLT1J LTR MaLR -7 504 361 243 227 0 0 chr18 9143785 9143830 -76845104 + polypyrimidine Low_complexity Low_complexity 1 45 0 21 36 0 0 chr18 9143897 9143925 -76845009 + AT_rich Low_complexity Low_complexity 1 28 0 2117 118 17 0 chr18 9143996 9144292 -76844642 + AluSg SINE Alu 1 301 -9 884 229 6 6 chr18 9144661 9144831 -76844103 - AluJb SINE Alu -7 305 136 387 0 0 0 chr18 9145199 9145242 -76843692 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2003 124 0 3 chr18 9145244 9145527 -76843407 - AluSx SINE Alu -30 282 1 1350 145 57 40 chr18 9146868 9147116 -76841818 - LTR39 LTR ERV1 0 783 532 2477 198 112 25 chr18 9147157 9147824 -76841110 - MER50 LTR ERV1 0 734 10 3384 160 4 6 chr18 9147834 9148366 -76840568 - LTR39 LTR ERV1 -252 531 1 306 0 0 0 chr18 9148706 9148740 -76840194 + (TG)n Simple_repeat Simple_repeat 2 35 0 592 326 52 19 chr18 9148943 9149188 -76839746 + L1MEd LINE L1 468 730 -5389 201 74 0 0 chr18 9149188 9149215 -76839719 + (CA)n Simple_repeat Simple_repeat 1 27 0 592 326 52 19 chr18 9149215 9149337 -76839597 + L1MEd LINE L1 730 847 -5272 941 206 39 37 chr18 9149371 9149841 -76839093 - L1MC4 LINE L1 -1249 6559 6139 430 229 73 34 chr18 9149868 9150047 -76838887 + L1M4 LINE L1 4091 4276 -1870 21 36 0 0 chr18 9150061 9150089 -76838845 + AT_rich Low_complexity Low_complexity 1 28 0 2617 178 28 28 chr18 9150143 9150534 -76838400 - MER66B LTR ERV1 -13 473 80 2116 118 10 0 chr18 9150534 9150853 -76838081 - AluSx SINE Alu 0 312 1 2617 178 28 28 chr18 9150853 9150934 -76838000 - MER66B LTR ERV1 -405 81 1 26 30 0 0 chr18 9150939 9150972 -76837962 + AT_rich Low_complexity Low_complexity 1 33 0 1076 290 73 33 chr18 9150977 9151645 -76837289 + L1M4 LINE L1 4399 5093 -1053 5532 142 29 43 chr18 9151656 9153256 -76835678 - L1PB3 LINE L1 0 6154 4584 2227 124 0 6 chr18 9153256 9153570 -76835364 + AluSx SINE Alu 1 312 0 5532 142 29 43 chr18 9153570 9153751 -76835183 - L1PB3 LINE L1 -1570 4584 4402 227 279 0 0 chr18 9203779 9203858 -76785076 - MSTD LTR MaLR -316 80 2 2189 109 7 0 chr18 9203888 9204181 -76784753 - AluSx SINE Alu -17 295 1 303 218 55 9 chr18 9204187 9204297 -76784637 + Charlie7 DNA MER1_type 2451 2565 -47 223 234 0 0 chr18 9206868 9206915 -76782019 - L2 LINE L2 -12 3260 3214 884 311 44 41 chr18 9207817 9208408 -76780526 + L1PA16 LINE L1 788 1380 -6194 241 323 0 10 chr18 9208542 9208641 -76780293 + L1PA16 LINE L1 2085 2182 -5399 13791 222 27 10 chr18 9208841 9213042 -76775892 + L1PA16 LINE L1 2182 6513 -1091 2063 118 3 10 chr18 9213042 9213338 -76775596 + AluSc SINE Alu 1 294 -15 13791 222 27 10 chr18 9213338 9214441 -76774493 + L1PA16 LINE L1 6513 7595 -9 608 197 117 0 chr18 9214779 9214916 -76774018 + MER63 DNA MER1_type 1 779 -57 578 314 57 18 chr18 9215050 9215279 -76773655 + MIR SINE MIR 15 252 -10 424 260 17 70 chr18 9215756 9215930 -76773004 - MIR SINE MIR -63 145 3 1711 108 0 37 chr18 9216659 9216927 -76772007 - AluSc SINE Alu -5 304 47 479 310 76 0 chr18 9217043 9217214 -76771720 - MIR SINE MIR -21 241 58 217 238 0 0 chr18 9218014 9218056 -76770878 + (CA)n Simple_repeat Simple_repeat 1 42 0 460 122 0 24 chr18 9218727 9218809 -76770125 + MADE1 DNA Mariner 1 80 0 247 222 19 0 chr18 9218850 9218904 -76770030 + (TG)n Simple_repeat Simple_repeat 2 56 0 243 267 155 37 chr18 9220769 9220930 -76768004 - L2 LINE L2 -12 3301 3122 2486 174 78 16 chr18 9221092 9221576 -76767358 - MLT2B1 LTR ERVL -3 517 4 1349 206 22 29 chr18 9221674 9222053 -76766881 + MER93b LTR ERV1 20 373 0 551 308 48 22 chr18 9222248 9222475 -76766459 - MIR SINE MIR -25 237 5 445 258 32 3 chr18 9223826 9223950 -76764984 - MER5B DNA MER1_type -6 172 51 2274 110 3 0 chr18 9224142 9224434 -76764500 - AluSx SINE Alu -19 293 1 797 229 10 34 chr18 9226830 9227035 -76761899 - LTR16C LTR ERVL -5 486 287 24 32 0 0 chr18 9227288 9227319 -76761615 + AT_rich Low_complexity Low_complexity 1 31 0 33993 43 3 2 chr18 9227319 9232270 -76756664 - L1PA5 LINE L1 -2 6152 1198 339 25 0 0 chr18 9232444 9232484 -76756450 + (TG)n Simple_repeat Simple_repeat 2 41 0 347 172 0 11 chr18 9234420 9234507 -76754427 + (TG)n Simple_repeat Simple_repeat 2 87 0 1388 148 13 4 chr18 9235125 9235361 -76753573 + L1MD2 LINE L1 6122 6359 0 189 0 0 0 chr18 9235973 9235994 -76752940 + (T)n Simple_repeat Simple_repeat 1 21 0 5615 105 57 0 chr18 9236129 9236931 -76752003 + L1PA13 LINE L1 5313 6160 -3 21 36 0 0 chr18 9237285 9237313 -76751621 + AT_rich Low_complexity Low_complexity 1 28 0 1585 147 65 49 chr18 9237664 9237971 -76750963 + AluJo SINE Alu 1 312 0 277 281 0 22 chr18 9238959 9239048 -76749886 - MLT1J2 LTR MaLR 0 450 364 1179 99 0 0 chr18 9239264 9239415 -76749519 - AluSx SINE Alu -134 178 28 1953 156 3 0 chr18 9240120 9240415 -76748519 + AluSx SINE Alu 1 296 -16 240 333 131 26 chr18 9242701 9242854 -76746080 - MIR SINE MIR -12 250 82 911 124 0 22 chr18 9242907 9243044 -76745890 + AluSq/x SINE Alu 1 134 -178 1016 146 13 6 chr18 9243144 9243302 -76745632 - AluSg/x SINE Alu -45 265 107 199 310 116 58 chr18 9243813 9243968 -76744966 - MIR SINE MIR -64 198 35 298 287 131 8 chr18 9245380 9245502 -76743432 - MLT1L LTR MaLR -2 613 477 1902 134 26 0 chr18 9246801 9247070 -76741864 + AluSq SINE Alu 1 276 -37 437 0 19 0 chr18 9247076 9247129 -76741805 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 2143 110 3 3 chr18 9247395 9247685 -76741249 - AluSq SINE Alu -23 290 1 200 86 29 0 chr18 9249633 9249668 -76739266 + (TC)n Simple_repeat Simple_repeat 2 37 0 284 207 50 121 chr18 9249934 9250074 -76738860 + MIR SINE MIR 44 173 -89 407 289 24 98 chr18 9250106 9250284 -76738650 - MIR SINE MIR -27 235 78 2155 121 3 0 chr18 9250284 9250581 -76738353 + AluSx SINE Alu 1 298 -14 407 289 24 98 chr18 9250581 9250648 -76738286 - MIR SINE MIR -184 78 8 295 218 153 89 chr18 9251778 9251902 -76737032 + Charlie7 DNA MER1_type 1 132 -2480 * 1108 157 135 15 chr18 9251870 9252137 -76736797 - LTR54B LTR ERV1 -5 493 195 412 121 76 0 chr18 9252111 9252177 -76736757 - LTR54B LTR ERV1 -405 93 23 * 1856 170 51 31 chr18 9252177 9252530 -76736404 - MSTC LTR MaLR 0 428 69 2301 68 9 40 chr18 9252691 9253013 -76735921 - AluSx SINE Alu 0 312 1 251 300 22 33 chr18 9253262 9253352 -76735582 + L3 LINE CR1 1482 1570 -7 21 82 0 0 chr18 9254056 9254105 -76734829 + AT_rich Low_complexity Low_complexity 1 49 0 22 88 0 0 chr18 9254170 9254227 -76734707 + AT_rich Low_complexity Low_complexity 1 57 0 234 156 0 0 chr18 9255621 9255666 -76733268 + (TTCA)n Simple_repeat Simple_repeat 4 48 0 262 250 28 0 chr18 9255719 9255791 -76733143 + GA-rich Low_complexity Low_complexity 1 74 0 211 234 66 102 chr18 9255811 9255948 -76732986 - MIR SINE MIR -7 255 124 256 154 0 0 chr18 9256049 9256088 -76732846 + HsTC2 DNA Tc2 1860 1898 0 1589 253 92 20 chr18 9256113 9256670 -76732264 - MER20B DNA MER1_type -1 782 186 781 261 6 0 chr18 9256677 9256842 -76732092 + FRAM SINE Alu 1 166 -10 440 261 102 19 chr18 9256842 9256999 -76731935 - MER20B DNA MER1_type -613 170 1 180 0 0 0 chr18 9258142 9258162 -76730772 + (GA)n Simple_repeat Simple_repeat 2 21 0 2707 137 21 30 chr18 9258540 9258970 -76729964 + MSTB LTR MaLR 1 426 0 9067 156 39 53 chr18 9258970 9260644 -76728290 + MSTB-int LTR MaLR 1 1651 0 2304 173 60 2 chr18 9260648 9261047 -76727887 + MSTB LTR MaLR 5 426 0 2988 216 113 77 chr18 9261358 9261556 -76727378 + L1MC5 LINE L1 6552 6741 -1220 2274 104 3 7 chr18 9261556 9261864 -76727070 - AluSc SINE Alu -2 307 1 2988 216 113 77 chr18 9261864 9262969 -76725965 + L1MC5 LINE L1 6741 7910 -51 210 298 14 14 chr18 9263892 9263970 -76724964 + MIR SINE MIR 20 97 -111 842 160 15 0 chr18 9264205 9264336 -76724598 + AluJo SINE Alu 2 134 -178 185 136 0 45 chr18 9264789 9264833 -76724101 + (ATTG)n Simple_repeat Simple_repeat 3 44 0 788 245 155 0 chr18 9266416 9266661 -76722273 + MER46C DNA MER2_type 6 288 -50 535 355 37 5 chr18 9266735 9266924 -76722010 - MIR SINE MIR -46 216 22 30 0 0 0 chr18 9267251 9267281 -76721653 + AT_rich Low_complexity Low_complexity 1 30 0 2057 130 7 0 chr18 9268409 9268709 -76720225 - AluSx SINE Alu -10 302 1 26 0 0 0 chr18 9269950 9269976 -76718958 + AT_rich Low_complexity Low_complexity 1 26 0 261 118 0 0 chr18 9270385 9270401 -76718533 + (CA)n Simple_repeat Simple_repeat 1 67 0 261 118 0 0 chr18 9270401 9270452 -76718482 + (CA)n Simple_repeat Simple_repeat 1 51 0 1086 268 231 30 chr18 9270479 9270832 -76718102 + L2 LINE L2 2232 2513 -800 1785 151 6 35 chr18 9270832 9271150 -76717784 + AluJo SINE Alu 1 309 -3 1086 268 231 30 chr18 9271150 9271659 -76717275 + L2 LINE L2 2513 3259 -54 511 174 67 54 chr18 9271670 9271810 -76717124 - MER69 DNA AcHobo -1 2525 2381 937 149 11 63 chr18 9271810 9271984 -76716950 - FRAM SINE Alu 0 166 2 1316 126 0 0 chr18 9272005 9272187 -76716747 - AluSg/x SINE Alu -25 287 106 2023 221 35 10 chr18 9272214 9272440 -76716494 - MER69 DNA AcHobo -139 2387 2168 183 80 0 0 chr18 9272440 9272465 -76716469 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2023 221 35 10 chr18 9272465 9272749 -76716185 - MER69 DNA AcHobo -358 2168 1864 2860 266 67 9 chr18 9272753 9273072 -76715862 - MER69 DNA AcHobo -1704 822 523 2302 121 39 36 chr18 9273072 9273435 -76715499 - THE1B LTR MaLR 0 364 1 2860 266 67 9 chr18 9273435 9273892 -76715042 - MER69 DNA AcHobo -2003 523 1 255 324 0 0 chr18 9274229 9274297 -76714637 + MIR SINE MIR 74 141 -67 1017 173 0 12 chr18 9274337 9274499 -76714435 + FRAM SINE Alu 1 160 -6 267 279 0 15 chr18 9276611 9276679 -76712255 + MIR SINE MIR 172 238 -24 2249 107 0 0 chr18 9277104 9277402 -76711532 - AluSx SINE Alu -13 299 2 1250 217 41 29 chr18 9277402 9277743 -76711191 - LTR37A LTR ERV1 -4 422 78 317 229 140 0 chr18 9278310 9278419 -76710515 - MIR SINE MIR -62 146 58 237 262 82 16 chr18 9278951 9279012 -76709922 - L2 LINE L2 -1882 1432 1368 201 340 78 26 chr18 9279346 9279499 -76709435 + MER91A DNA MER1_type 1 161 -35 202 267 0 33 chr18 9280036 9280096 -76708838 + L2 LINE L2 3246 3303 -10 195 100 0 0 chr18 9280097 9280127 -76708807 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 2029 107 69 0 chr18 9280947 9281236 -76707698 + AluSc SINE Alu 1 309 0 1509 211 7 7 chr18 9281584 9281868 -76707066 + AluJo SINE Alu 4 287 -25 725 128 196 0 chr18 9282637 9282770 -76706164 - MSTA LTR MaLR -269 159 1 1290 172 27 148 chr18 9282824 9283237 -76705697 - MLT1A1 LTR MaLR 0 365 3 480 72 0 0 chr18 9283704 9283773 -76705161 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 464 255 107 20 chr18 9283868 9284017 -76704917 - MIR SINE MIR -87 175 14 695 260 54 37 chr18 9284248 9284490 -76704444 - MER45C DNA AcHobo 0 953 708 3119 167 23 21 chr18 9284657 9285227 -76703707 + L1MC1 LINE L1 5762 6332 -1 398 282 55 59 chr18 9285361 9285563 -76703371 + MIR SINE MIR 16 216 -46 28 71 0 0 chr18 9286356 9286412 -76702522 + AT_rich Low_complexity Low_complexity 1 56 0 2213 171 29 67 chr18 9286506 9286986 -76701948 + MLT1C LTR MaLR 1 462 -5 920 266 41 12 chr18 9289045 9289289 -76699645 + MIR SINE MIR 2 252 -10 658 201 58 75 chr18 9290378 9290401 -76698533 - L1MC5 LINE L1 -30 7931 7909 2140 117 0 0 chr18 9290401 9290692 -76698242 + AluSx SINE Alu 1 291 -21 658 201 58 75 chr18 9290692 9290961 -76697973 - L1MC5 LINE L1 -52 7909 7644 1358 113 39 13 chr18 9290964 9291195 -76697739 - Tigger7 DNA MER2_type -1 2490 2254 1736 133 0 0 chr18 9291220 9291488 -76697446 + AluSx SINE Alu 34 301 0 1413 215 97 82 chr18 9291501 9291657 -76697277 - L1MC5 LINE L1 -518 7443 7291 2945 91 8 8 chr18 9291657 9292032 -76696902 + THE1C LTR MaLR 1 375 0 1413 215 97 82 chr18 9292032 9292474 -76696460 - L1MC5 LINE L1 -670 7291 6836 27 29 0 0 chr18 9292680 9292714 -76696220 + AT_rich Low_complexity Low_complexity 1 34 0 945 238 33 46 chr18 9292836 9293139 -76695795 - L1ME1 LINE L1 -5 6161 5863 * 3366 218 37 89 chr18 9293136 9293635 -76695299 - L1ME1 LINE L1 -1414 4732 4208 1114 180 46 0 chr18 9293635 9293852 -76695082 - L1MA4 LINE L1 -3 6297 6071 3366 218 37 89 chr18 9293852 9294169 -76694765 - L1ME1 LINE L1 -1938 4208 4002 2212 138 0 0 chr18 9294169 9294481 -76694453 + AluSx SINE Alu 1 312 0 3366 218 37 89 chr18 9294481 9294918 -76694016 - L1ME1 LINE L1 -2144 4002 3544 5160 120 13 8 chr18 9294928 9295696 -76693238 + L1P LINE L1 11 782 -5364 439 229 48 0 chr18 9295867 9295972 -76692962 + MIR SINE MIR 20 129 -133 334 254 27 129 chr18 9296092 9296316 -76692618 - L2 LINE L2 -94 3178 2978 2245 130 0 0 chr18 9296853 9297153 -76691781 + AluSx SINE Alu 1 300 -12 2189 100 24 0 chr18 9298038 9298328 -76690606 + AluSg SINE Alu 1 297 -13 1910 129 0 14 chr18 9300148 9300435 -76688499 + AluSx SINE Alu 1 283 -29 347 285 23 47 chr18 9300451 9300471 -76688463 - HAL1b LINE L1 -37 1311 1292 332 284 49 95 chr18 9300471 9300773 -76688161 - L1ME4a LINE L1 -73 6048 5734 743 206 0 8 chr18 9300773 9300904 -76688030 - FLAM_A SINE Alu -3 130 1 332 284 49 95 chr18 9300904 9300989 -76687945 - L1ME4a LINE L1 -387 5734 1144 537 138 0 0 chr18 9301199 9301279 -76687655 + MADE1 DNA Mariner 1 80 0 29 0 0 0 chr18 9301297 9301326 -76687608 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr18 9301650 9301674 -76687260 + AT_rich Low_complexity Low_complexity 1 24 0 261 0 0 0 chr18 9302011 9302040 -76686894 + (TGAG)n Simple_repeat Simple_repeat 4 32 0 2227 98 3 26 chr18 9302624 9302931 -76686003 + AluSx SINE Alu 5 304 -8 245 290 180 0 chr18 9302932 9303032 -76685902 - MIR SINE MIR -139 123 6 1944 274 91 29 chr18 9303632 9304361 -76684573 - HERV16 LTR ERVL -2590 2406 1633 1967 294 52 27 chr18 9304574 9305456 -76683478 - HERV16 LTR ERVL -3711 1285 317 2186 203 90 13 chr18 9305456 9305924 -76683010 + MLT1D LTR MaLR 1 504 -1 1967 294 52 27 chr18 9305924 9306128 -76682806 - HERV16 LTR ERVL -4679 317 119 932 280 52 42 chr18 9306226 9306513 -76682421 - LTR16A LTR ERVL 0 450 156 2075 180 31 6 chr18 9306513 9306869 -76682065 - MLT1A1 LTR MaLR 0 365 1 932 280 52 42 chr18 9306869 9307006 -76681928 - LTR16A LTR ERVL -294 156 22 181 204 28 28 chr18 9307332 9307474 -76681460 + (TG)n Simple_repeat Simple_repeat 1 142 0 432 0 0 0 chr18 9307954 9308002 -76680932 + (CA)n Simple_repeat Simple_repeat 1 48 0 227 224 17 0 chr18 9308615 9308673 -76680261 + L1ME4a LINE L1 5997 6055 -66 2227 161 54 7 chr18 9308679 9309084 -76679850 - MSTB1 LTR MaLR 0 432 9 625 236 73 47 chr18 9309095 9309396 -76679538 - L1ME4a LINE L1 0 6121 5813 255 258 79 0 chr18 9309436 9309525 -76679409 - L1ME4a LINE L1 -382 5739 5644 324 113 0 32 chr18 9310432 9310494 -76678440 + AluSp/q SINE Alu 244 303 0 1685 197 3 0 chr18 9310500 9310790 -76678144 - 7SLRNA srpRNA srpRNA -29 291 1 1954 280 121 11 chr18 9310881 9311609 -76677325 + L2 LINE L2 1567 2374 -940 229 280 0 80 chr18 9312097 9312172 -76676762 + L2 LINE L2 2644 2712 -602 2177 119 0 0 chr18 9312176 9312469 -76676465 + AluSx SINE Alu 1 293 -19 197 312 26 39 chr18 9312806 9312883 -76676051 - MIR SINE MIR -94 114 39 410 240 236 29 chr18 9313197 9313405 -76675529 - MIR SINE MIR -5 257 7 508 214 23 30 chr18 9314329 9314460 -76674474 + Tigger5 DNA MER2_type 1 130 -2193 394 227 0 0 chr18 9314443 9314518 -76674416 + Tigger5 DNA MER2_type 2249 2323 0 * 901 159 267 19 chr18 9316614 9316726 -76672208 - Charlie1b DNA MER1_type -2266 495 412 2046 88 44 4 chr18 9316726 9317049 -76671885 - AluSq SINE Alu 0 334 1 901 159 267 19 chr18 9317049 9317193 -76671741 - Charlie1b DNA MER1_type -2349 412 174 650 229 64 0 chr18 9317160 9317317 -76671617 - Charlie1b DNA MER1_type -313 210 44 * 222 277 15 0 chr18 9317679 9317744 -76671190 + L2 LINE L2 2033 2098 -1216 1046 302 114 55 chr18 9317891 9318607 -76670327 + L2 LINE L2 2107 2865 -449 968 299 138 37 chr18 9318632 9319046 -76669888 - L2 LINE L2 -1 3312 2941 2420 146 39 99 chr18 9319046 9319582 -76669352 - MLT1D LTR MaLR -1 504 1 968 299 138 37 chr18 9319582 9320119 -76668815 - L2 LINE L2 -372 2941 2266 2265 175 43 17 chr18 9320264 9320516 -76668418 + L1MC/D LINE L1 4910 5154 -1179 2099 124 0 3 chr18 9320516 9320798 -76668136 + AluSx SINE Alu 1 281 -31 339 65 0 0 chr18 9320798 9320844 -76668090 + (GAATG)n Simple_repeat Simple_repeat 2 47 0 2265 175 43 17 chr18 9320844 9321339 -76667595 + L1MC/D LINE L1 5153 5673 -660 4417 151 4 24 chr18 9321440 9322139 -76666795 - L1MA8 LINE L1 -180 6111 5400 2093 110 3 36 chr18 9322139 9322447 -76666487 - AluSc SINE Alu -11 298 1 4417 151 4 24 chr18 9322447 9323282 -76665652 - L1MA8 LINE L1 -891 5400 4612 356 58 19 0 chr18 9323278 9323330 -76665604 - L1MA8 LINE L1 -1833 4313 4261 * 443 315 122 14 chr18 9323371 9323584 -76665350 + MIR SINE MIR 20 255 -7 365 230 67 52 chr18 9323695 9323830 -76665104 + LTR48 LTR ERV1 323 459 -328 271 79 0 0 chr18 9323918 9323956 -76664978 + LTR48 LTR ERV1 613 650 -137 2209 107 3 0 chr18 9324083 9324381 -76664553 - AluSp SINE Alu -14 299 1 329 270 224 35 chr18 9324816 9324990 -76663944 - L2 LINE L2 -244 3069 2863 2729 165 102 17 chr18 9325611 9326198 -76662736 - L1MB5 LINE L1 -87 6087 5451 588 226 105 32 chr18 9326223 9326413 -76662521 + MER112 DNA MER1_type 44 247 -13 2005 124 0 7 chr18 9326807 9327111 -76661823 + AluSq SINE Alu 3 304 0 866 264 7 74 chr18 9327196 9327465 -76661469 - MIR SINE MIR -9 253 3 948 158 16 26 chr18 9328169 9328488 -76660446 + MLT1A1 LTR MaLR 8 365 0 322 299 76 22 chr18 9328589 9328773 -76660161 - MER117 DNA MER1_type -2 195 2 356 230 20 56 chr18 9328960 9329170 -76659764 + L1MDb LINE L1 1465 1728 -4916 305 247 39 0 chr18 9329242 9329319 -76659615 + L1MDb LINE L1 1775 1854 -4790 539 253 152 55 chr18 9329475 9329838 -76659096 + MLT1J2 LTR MaLR 36 433 -17 1198 134 17 0 chr18 9329838 9330017 -76658917 - AluSg/x SINE Alu -11 301 120 646 239 34 76 chr18 9330147 9330336 -76658598 - L1M4 LINE L1 -2613 3533 3366 2079 136 24 0 chr18 9330336 9330631 -76658303 - AluSq SINE Alu -11 302 1 646 239 34 76 chr18 9330631 9330821 -76658113 - L1M4 LINE L1 -2780 3366 3170 552 215 31 23 chr18 9330822 9330952 -76657982 - FLAM_C SINE Alu -12 131 1 1439 343 84 5 chr18 9330961 9331629 -76657305 - L1M4 LINE L1 -2982 3164 2444 324 197 41 8 chr18 9331657 9331779 -76657155 + (TA)n Simple_repeat Simple_repeat 1 126 0 234 91 0 0 chr18 9331784 9331817 -76657117 + (TG)n Simple_repeat Simple_repeat 2 34 0 701 191 0 0 chr18 9331863 9331978 -76656956 - FLAM_A SINE Alu -18 115 1 308 188 55 8 chr18 9332202 9332330 -76656604 + (TA)n Simple_repeat Simple_repeat 2 135 0 342 183 67 6 chr18 9332368 9332532 -76656402 + (TA)n Simple_repeat Simple_repeat 1 174 0 2206 156 33 35 chr18 9333500 9333923 -76655011 - MSTB LTR MaLR -4 422 1 187 267 11 100 chr18 9334515 9334605 -76654329 - MIR3 SINE MIR -32 176 95 351 65 0 0 chr18 9334644 9334690 -76654244 + (CA)n Simple_repeat Simple_repeat 2 47 0 220 276 40 0 chr18 9334740 9334816 -76654118 + GA-rich Low_complexity Low_complexity 4 82 0 398 318 58 31 chr18 9334871 9335094 -76653840 + MIR SINE MIR 1 229 -33 382 304 111 0 chr18 9335218 9335353 -76653581 + L2 LINE L2 3123 3272 0 183 314 28 103 chr18 9335508 9335760 -76653174 + L2 LINE L2 2914 3146 -126 2813 93 3 3 chr18 9336304 9336679 -76652255 - THE1C LTR MaLR 0 375 1 438 304 56 19 chr18 9337634 9337795 -76651139 - MIR SINE MIR -71 191 25 1595 103 5 0 chr18 9337930 9338143 -76650791 + AluSg/x SINE Alu 80 293 -17 239 326 111 7 chr18 9338278 9338413 -76650521 + L2 LINE L2 2596 2744 -570 190 300 29 14 chr18 9339420 9339490 -76649444 + MIR3 SINE MIR 127 197 -11 214 277 0 0 chr18 9339571 9339618 -76649316 - MIR SINE MIR -83 125 79 204 259 37 0 chr18 9340126 9340180 -76648754 + CT-rich Low_complexity Low_complexity 5 60 0 632 177 69 15 chr18 9340726 9340856 -76648078 + FLAM_C SINE Alu 6 142 -1 2356 115 0 0 chr18 9343740 9344052 -76644882 + AluSx SINE Alu 1 312 0 420 257 22 29 chr18 9344316 9344452 -76644482 - MLT1J LTR MaLR -351 160 26 1756 246 113 43 chr18 9344791 9345519 -76643415 + L1ME1 LINE L1 5383 6161 -5 1773 187 12 52 chr18 9345724 9346130 -76642804 + MLT1B LTR MaLR 1 390 0 311 266 11 0 chr18 9346695 9346789 -76642145 - MER103 DNA DNA -8 158 64 1700 161 4 4 chr18 9347414 9347681 -76641253 - AluJb SINE Alu -41 271 5 1608 215 0 6 chr18 9348815 9349127 -76639807 + AluSx SINE Alu 1 310 -2 903 298 92 44 chr18 9351318 9351960 -76636974 - L2 LINE L2 0 3313 2618 2135 117 3 0 chr18 9351960 9352259 -76636675 + AluSg SINE Alu 1 300 -10 903 298 92 44 chr18 9352259 9352347 -76636587 - L2 LINE L2 -695 2618 2536 409 262 59 15 chr18 9352797 9352999 -76635935 + HAL1 LINE L1 1448 1658 -849 1319 211 100 33 chr18 9353037 9353458 -76635476 - LTR40a LTR ERVL 0 519 71 989 298 81 41 chr18 9353870 9354776 -76634158 + L1MEc LINE L1 35 976 -5420 180 250 77 58 chr18 9355129 9355181 -76633753 + MIR SINE MIR 2 54 -208 814 79 0 0 chr18 9355281 9355382 -76633552 - AluSg SINE Alu -209 101 1 485 253 3 2 chr18 9355477 9355644 -76633290 + L1MC/D LINE L1 5266 5430 -2378 35 24 0 0 chr18 9355706 9355748 -76633186 + AT_rich Low_complexity Low_complexity 1 42 0 896 146 0 0 chr18 9356907 9357037 -76631897 + FLAM_A SINE Alu 1 130 -3 423 130 0 0 chr18 9357209 9357286 -76631648 + (TC)n Simple_repeat Simple_repeat 2 78 0 234 0 0 0 chr18 9357286 9357312 -76631622 + (CA)n Simple_repeat Simple_repeat 1 26 0 23 33 0 0 chr18 9357753 9357783 -76631151 + AT_rich Low_complexity Low_complexity 1 30 0 189 196 0 0 chr18 9358423 9358474 -76630460 + T-rich Low_complexity Low_complexity 1 51 0 32 0 0 0 chr18 9358535 9358567 -76630367 + AT_rich Low_complexity Low_complexity 1 32 0 210 37 0 0 chr18 9359826 9359853 -76629081 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 1447 204 12 20 chr18 9360230 9360574 -76628360 + L1PA16 LINE L1 5809 6149 -17 2166 88 7 11 chr18 9361830 9362157 -76626777 + AluSp SINE Alu 1 326 0 485 278 69 35 chr18 9363028 9363201 -76625733 + MIR SINE MIR 84 262 0 1959 161 7 3 chr18 9363639 9363937 -76624997 - AluJo SINE Alu -13 299 1 2353 91 17 0 chr18 9364382 9364678 -76624256 + AluSq SINE Alu 1 301 -12 2095 123 0 3 chr18 9365975 9366268 -76622666 - AluSx SINE Alu -20 292 1 1129 253 40 16 chr18 9366322 9366702 -76622232 - LTR40b LTR ERVL -38 424 36 447 339 36 21 chr18 9367551 9367743 -76621191 - MIR SINE MIR -60 202 8 776 248 37 53 chr18 9368949 9369195 -76619739 - MIR SINE MIR -13 249 8 186 316 0 0 chr18 9369344 9369401 -76619533 + L2 LINE L2 2262 2318 -996 4077 170 70 11 chr18 9369462 9370373 -76618561 + L1P LINE L1 4357 5321 -825 452 347 36 6 chr18 9570941 9571108 -76417826 - MIR3 SINE MIR -30 178 7 513 16 31 0 chr18 9571546 9571610 -76417324 - L1PA7 LINE L1 -287 5867 5802 500 201 52 60 chr18 9571610 9571744 -76417190 - MLT1C LTR MaLR -334 133 1 1419 187 119 42 chr18 9571744 9572337 -76416597 - L1ME LINE L1 -359 5874 5242 255 148 19 0 chr18 9572354 9572408 -76416526 - L1ME LINE L1 -1785 4430 4376 717 0 0 0 chr18 9572426 9572514 -76416420 - L1HS LINE L1 0 6155 6068 * 1036 235 79 16 chr18 9572513 9572892 -76416042 - L1ME LINE L1 -1829 4386 3984 2026 216 109 18 chr18 9572933 9573729 -76415205 - L1ME LINE L1 -3018 3197 2329 357 263 24 57 chr18 9573800 9574009 -76414925 - L1ME LINE L1 -4328 2068 1867 1252 223 70 106 chr18 9574097 9574756 -76414178 - L1MC4 LINE L1 -151 7891 7257 349 165 146 0 chr18 9574769 9574872 -76414062 - L1MC4 LINE L1 -963 7079 6962 308 233 64 134 chr18 9574891 9575063 -76413871 + L1ME LINE L1 436 595 -5475 405 310 114 39 chr18 9575068 9575481 -76413453 - L2 LINE L2 -46 3267 2824 931 340 24 15 chr18 9575515 9575982 -76412952 - L2 LINE L2 -609 2705 2235 34 42 0 0 chr18 9576186 9576234 -76412700 + AT_rich Low_complexity Low_complexity 1 48 0 3046 173 45 8 chr18 9576835 9577668 -76411266 + MER54A LTR ERVL 1 901 0 214 231 88 55 chr18 9577668 9577759 -76411175 - MIR SINE MIR -118 144 51 748 239 56 0 chr18 9579448 9579645 -76409289 + MER3 DNA MER1_type 2 209 0 630 185 3 0 chr18 9579872 9580017 -76408917 + L1MA3 LINE L1 6041 6184 -120 1157 225 93 15 chr18 9580027 9580361 -76408573 + MLT1C LTR MaLR 108 467 0 256 186 139 12 chr18 9580362 9580448 -76408486 + L1ME2 LINE L1 5801 5897 -462 594 212 22 7 chr18 9580509 9580646 -76408288 + L1ME2 LINE L1 5989 6127 -37 914 257 19 0 chr18 9580654 9580911 -76408023 + L1MC4a LINE L1 6339 6600 -1208 1308 203 7 0 chr18 9581476 9581762 -76407172 + L1PA16 LINE L1 4877 5164 -982 6451 63 31 36 chr18 9581769 9583489 -76405445 + SVA Other Other 1 1386 0 751 144 8 0 chr18 9583549 9583681 -76405253 - MER63 DNA MER1_type -5 1057 925 5146 121 40 25 chr18 9583696 9584692 -76404242 + L1PA16 LINE L1 5152 6161 -5 223 182 0 0 chr18 9585475 9585519 -76403415 + (TTAAA)n Simple_repeat Simple_repeat 3 46 0 2241 98 0 29 chr18 9585604 9585919 -76403015 - AluSg SINE Alu -4 306 1 647 170 6 58 chr18 9586102 9586273 -76402661 + L1M3 LINE L1 5449 5610 -561 2448 53 0 13 chr18 9586950 9587254 -76401680 - AluY SINE Alu -11 300 1 614 28 64 0 chr18 9588772 9588881 -76400053 + CT-rich Low_complexity Low_complexity 1 116 0 390 284 104 52 chr18 9589264 9589669 -76399265 - HAL1 LINE L1 -915 1592 1167 1626 158 9 73 chr18 9589724 9590040 -76398894 + AluJo SINE Alu 1 296 -16 381 264 54 85 chr18 9590048 9590343 -76398591 - HAL1 LINE L1 -1424 1083 798 410 114 89 0 chr18 9590466 9590545 -76398389 + L1MA2 LINE L1 6219 6304 0 248 189 81 0 chr18 9590551 9590625 -76398309 + LTR37B LTR ERV1 389 468 0 30 27 0 0 chr18 9590625 9590662 -76398272 + AT_rich Low_complexity Low_complexity 1 37 0 206 244 0 0 chr18 9590774 9590815 -76398119 + L2 LINE L2 3210 3250 -22 249 236 56 0 chr18 9591863 9591952 -76396982 - MLT1J LTR MaLR -19 492 399 204 244 0 0 chr18 9592082 9592123 -76396811 + L2 LINE L2 3210 3250 -22 1493 192 69 0 chr18 9592741 9593017 -76395917 - AluJo SINE Alu -15 297 3 2839 72 20 8 chr18 9593069 9593459 -76395475 - L1PA11 LINE L1 -2 6172 5778 197 108 27 0 chr18 9593931 9593968 -76394966 + (ATG)n Simple_repeat Simple_repeat 1 38 0 2307 191 77 2 chr18 9594442 9594925 -76394009 - LTR53 LTR ERVL 0 519 1 198 0 0 0 chr18 9595288 9595310 -76393624 + (TG)n Simple_repeat Simple_repeat 2 23 0 2117 215 54 13 chr18 9595402 9595937 -76392997 - MER68 LTR ERV1 0 562 6 850 151 22 7 chr18 9596228 9596367 -76392567 + AluSg/x SINE Alu 162 302 -8 1587 139 86 83 chr18 9596497 9596929 -76392005 + L1MB3 LINE L1 5593 6025 -158 996 284 92 46 chr18 9598847 9600259 -76388675 - L1MCc LINE L1 -4260 2862 1167 22 35 0 0 chr18 9600749 9600778 -76388156 + AT_rich Low_complexity Low_complexity 1 29 0 445 335 122 45 chr18 9601172 9601696 -76387238 + L2 LINE L2 2747 3311 -2 626 264 164 0 chr18 9601845 9602046 -76386888 + MIR SINE MIR 5 238 -24 448 297 102 37 chr18 9602233 9602607 -76386327 + MLT1J LTR MaLR 112 509 -2 1588 113 0 23 chr18 9602756 9603013 -76385921 - AluSg/x SINE Alu 0 317 66 2011 142 14 7 chr18 9603013 9603306 -76385628 - AluJo SINE Alu -15 297 1 466 187 22 0 chr18 9604310 9604401 -76384533 + Tigger1 DNA MER2_type 2326 2418 0 676 199 123 0 chr18 9604493 9604657 -76384277 + L1MB7 LINE L1 5989 6165 -1 23 33 0 0 chr18 9604677 9604707 -76384227 + AT_rich Low_complexity Low_complexity 1 30 0 208 186 23 0 chr18 9607851 9607894 -76381040 + L2 LINE L2 1959 2002 -1312 367 313 0 97 chr18 9607926 9608102 -76380832 - MER5A DNA MER1_type -28 161 3 564 185 0 96 chr18 9608379 9608514 -76380420 + FLAM_C SINE Alu 14 135 -8 182 354 101 32 chr18 9608569 9608727 -76380207 + L2 LINE L2 2893 3061 -252 22 0 0 0 chr18 9608794 9608816 -76380118 + AT_rich Low_complexity Low_complexity 1 22 0 378 233 34 125 chr18 9609039 9609153 -76379781 - L2 LINE L2 -4 3309 3215 2242 111 73 66 chr18 9609153 9609578 -76379356 + MSTA LTR MaLR 1 428 0 378 233 34 125 chr18 9609578 9609639 -76379295 - L2 LINE L2 -98 3215 3150 745 299 67 85 chr18 9609678 9610772 -76378162 + L1MEc LINE L1 37 1110 -5286 2941 244 55 22 chr18 9610861 9611768 -76377166 + L1MEc LINE L1 40 976 -5420 1000 279 112 26 chr18 9611820 9612429 -76376505 + L1MEc LINE L1 1326 1986 -4410 21 36 0 0 chr18 9612432 9612460 -76376474 + AT_rich Low_complexity Low_complexity 1 28 0 354 207 25 16 chr18 9612509 9612630 -76376304 - L1MEc LINE L1 -5224 1172 1051 7683 229 60 53 chr18 9612723 9612780 -76376154 + L1MEc LINE L1 2143 2198 -4017 2007 111 6 44 chr18 9612780 9613095 -76375839 + AluSx SINE Alu 1 303 -9 7683 229 60 53 chr18 9613095 9613189 -76375745 + L1MEc LINE L1 2198 2290 -3925 2519 75 3 0 chr18 9613189 9613494 -76375440 + AluSq SINE Alu 1 306 -7 7683 229 60 53 chr18 9613494 9613841 -76375093 + L1MEc LINE L1 2290 2633 -3582 602 208 0 69 chr18 9613841 9613971 -76374963 + FLAM_A SINE Alu 1 121 -12 7683 229 60 53 chr18 9613971 9614895 -76374039 + L1MEc LINE L1 2633 3549 -2666 2451 81 0 3 chr18 9614895 9615204 -76373730 + AluY SINE Alu 1 308 -3 7683 229 60 53 chr18 9615204 9616258 -76372676 + L1MEc LINE L1 3549 4595 -1620 3361 151 25 62 chr18 9616258 9616327 -76372607 + L1MA4 LINE L1 5547 5617 -683 2244 129 3 3 chr18 9616327 9616637 -76372297 + AluSx SINE Alu 1 310 -2 3361 151 25 62 chr18 9616637 9617338 -76371596 + L1MA4 LINE L1 5617 6288 -12 7683 229 60 53 chr18 9617338 9618106 -76370828 + L1MEc LINE L1 4595 5374 -841 7066 52 32 1 chr18 9618106 9619757 -76369177 - L1PA7 LINE L1 -4 6150 4471 7683 229 60 53 chr18 9619757 9619813 -76369121 + L1MEc LINE L1 5374 5428 -787 1413 154 75 4 chr18 9620138 9620405 -76368529 - L1PB2 LINE L1 -1 6150 5865 2227 94 0 3 chr18 9620479 9620767 -76368167 + AluSq SINE Alu 1 287 -26 272 138 69 0 chr18 9620830 9620888 -76368046 - L1M4 LINE L1 -1198 4948 4887 2246 105 0 0 chr18 9621014 9621309 -76367625 + AluSg SINE Alu 1 295 -15 25 51 0 0 chr18 9622089 9622128 -76366806 + AT_rich Low_complexity Low_complexity 1 39 0 226 295 0 0 chr18 9622689 9622750 -76366184 + (TATG)n Simple_repeat Simple_repeat 3 63 0 666 269 46 15 chr18 9623299 9623496 -76365438 + MER58A DNA MER1_type 22 224 0 2011 138 3 3 chr18 9623991 9624287 -76364647 + AluJb SINE Alu 1 296 -16 806 264 95 22 chr18 9626364 9626637 -76362297 + MER20B DNA MER1_type 22 314 -469 557 277 34 24 chr18 9626648 9626854 -76362080 - L1ME1 LINE L1 -5 6161 5954 270 58 0 184 chr18 9626869 9626881 -76362053 + Alu SINE Alu 251 264 -37 1569 83 10 0 chr18 9626881 9627074 -76361860 + AluSq SINE Alu 3 197 -116 270 58 0 184 chr18 9627074 9627163 -76361771 + Alu SINE Alu 264 301 0 1243 206 129 34 chr18 9627222 9627512 -76361422 + MER20B DNA MER1_type 300 638 -145 3324 81 30 7 chr18 9627512 9627946 -76360988 + MLT2A1 LTR ERVL 1 444 0 1243 206 129 34 chr18 9627946 9628043 -76360891 + MER20B DNA MER1_type 638 724 -59 398 348 88 39 chr18 9628093 9628558 -76360376 + L2 LINE L2 1982 2469 -845 359 296 117 41 chr18 9628657 9628837 -76360097 + L1ME4a LINE L1 5559 5724 -397 2120 115 0 34 chr18 9628837 9629160 -76359774 + AluSx SINE Alu 1 312 0 359 296 117 41 chr18 9629160 9629296 -76359638 + L1ME4a LINE L1 5724 5899 -222 2113 119 0 10 chr18 9629393 9629686 -76359248 - AluSx SINE Alu -22 290 1 294 360 83 36 chr18 9629903 9630181 -76358753 + L2 LINE L2 2944 3234 -38 2376 92 0 13 chr18 9630211 9630526 -76358408 + AluY SINE Alu 1 311 0 2541 111 33 18 chr18 9630539 9630936 -76357998 - MSTA LTR MaLR -25 403 1 210 255 0 20 chr18 9631411 9631462 -76357472 + MER5B DNA MER1_type 89 138 -40 2483 72 0 3 chr18 9631733 9632039 -76356895 - AluSq SINE Alu -8 305 1 25 0 0 0 chr18 9632198 9632223 -76356711 + AT_rich Low_complexity Low_complexity 1 25 0 547 227 108 20 chr18 9632950 9633153 -76355781 + MER112 DNA MER1_type 2 222 -38 267 353 73 7 chr18 9634298 9634448 -76354486 + L2 LINE L2 3111 3270 -2 446 268 174 7 chr18 9634616 9634754 -76354180 - MER5A DNA MER1_type 0 189 29 889 235 127 70 chr18 9634871 9635327 -76353607 - LTR33 LTR ERVL -11 510 29 2465 74 3 0 chr18 9635374 9635671 -76353263 + AluSp SINE Alu 1 298 -15 28 68 0 14 chr18 9636172 9636225 -76352709 + AT_rich Low_complexity Low_complexity 1 54 -19 1583 129 25 107 chr18 9636225 9636543 -76352391 + AluYb8 SINE Alu 1 292 -26 28 68 0 14 chr18 9636543 9636563 -76352371 + AT_rich Low_complexity Low_complexity 54 73 0 2342 82 0 13 chr18 9638063 9638368 -76350566 - AluSq SINE Alu -12 301 1 1277 218 70 33 chr18 9638414 9638745 -76350189 + MER2 DNA MER2_type 1 343 -1 439 290 71 24 chr18 9640312 9640481 -76348453 - MIR SINE MIR -77 185 9 408 40 0 0 chr18 9641200 9641250 -76347684 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 1699 180 0 7 chr18 9641250 9641534 -76347400 - AluJo SINE Alu -30 282 1 240 350 114 34 chr18 9641592 9642057 -76346877 + L2 LINE L2 2359 2860 -454 232 320 13 13 chr18 9642141 9642219 -76346715 + MIR SINE MIR 1 78 -184 499 93 93 70 chr18 9642379 9642465 -76346469 + AluJ/FLAM SINE Alu 2 89 -223 358 291 19 39 chr18 9645334 9645525 -76343409 + MIR SINE MIR 17 206 -56 376 323 24 30 chr18 9645658 9645825 -76343109 + L2 LINE L2 3148 3313 0 2189 150 5 40 chr18 9645910 9645959 -76342975 - MER47A DNA MER2_type -1957 366 317 2257 78 0 20 chr18 9645959 9646252 -76342682 + AluSq SINE Alu 27 313 0 2189 150 5 40 chr18 9646252 9646581 -76342353 - MER47A DNA MER2_type -2006 317 1 885 108 122 0 chr18 9646941 9647089 -76341845 - L1MA4A LINE L1 -5 6298 6133 1829 164 0 25 chr18 9647629 9647946 -76340988 + AluJo SINE Alu 1 309 -3 739 275 36 5 chr18 9649284 9649506 -76339428 + MIR SINE MIR 21 249 -13 3570 277 104 34 chr18 9649949 9652006 -76336928 + L1MEc LINE L1 42 2243 -4153 332 212 88 18 chr18 9652016 9652129 -76336805 + L1MEc LINE L1 2309 2429 -3786 778 341 38 22 chr18 9652136 9652587 -76336347 - LTR16B LTR ERVL -6 458 1 4235 229 69 21 chr18 9652587 9653937 -76334997 + L1MEc LINE L1 2426 3839 -2376 498 198 10 0 chr18 9654524 9654620 -76334314 - Tigger7 DNA MER2_type -2 2585 2489 301 224 30 15 chr18 9654618 9654685 -76334249 - Tigger7 DNA MER2_type -284 266 199 * 276 289 0 50 chr18 9655268 9655389 -76333545 - L2 LINE L2 -27 3286 3172 275 241 0 120 chr18 9655531 9655591 -76333343 + MIR SINE MIR 106 150 -112 1969 120 29 0 chr18 9655591 9655892 -76333042 + AluSx SINE Alu 1 309 0 275 241 0 120 chr18 9655892 9655938 -76332996 + MIR SINE MIR 150 200 -62 226 293 89 41 chr18 9656249 9656372 -76332562 - L2 LINE L2 -18 3295 3167 1752 172 16 26 chr18 9656805 9657113 -76331821 + AluJo SINE Alu 1 305 -7 267 296 81 70 chr18 9657428 9658097 -76330837 - HAL1 LINE L1 -891 1616 941 247 293 105 45 chr18 9658243 9658376 -76330558 - MLT1J LTR MaLR -55 456 316 2490 225 76 41 chr18 9659153 9659914 -76329020 + L1ME1 LINE L1 5373 6160 -6 2804 135 30 18 chr18 9660586 9661001 -76327933 - LTR45B LTR ERV1 0 783 72 3993 104 71 14 chr18 9661001 9661312 -76327622 + MER4B LTR ERV1 1 293 -317 2288 107 0 7 chr18 9661312 9661612 -76327322 - AluSq SINE Alu -15 298 1 3993 104 71 14 chr18 9661612 9661877 -76327057 + MER4B LTR ERV1 293 610 0 2804 135 30 18 chr18 9661877 9661948 -76326986 - LTR45B LTR ERV1 -711 72 3 474 264 88 129 chr18 9662145 9662416 -76326518 - HAL1 LINE L1 -1043 1464 1224 7957 158 151 36 chr18 9662416 9663989 -76324945 + MER52A LTR ERV1 1 1753 -2 474 264 88 129 chr18 9663989 9664243 -76324691 - HAL1 LINE L1 -1283 1224 961 1098 155 0 0 chr18 9664344 9664512 -76324422 - FRAM SINE Alu -9 167 1 1341 211 96 41 chr18 9664512 9664948 -76323986 - L1ME2 LINE L1 -60 6384 5925 1966 117 67 0 chr18 9666379 9666662 -76322272 - AluSq SINE Alu -11 302 1 180 0 0 0 chr18 9666915 9666935 -76321999 + (CAA)n Simple_repeat Simple_repeat 2 21 0 247 367 58 0 chr18 9669177 9669297 -76319637 + L2 LINE L2 2587 2713 -601 198 301 36 36 chr18 9669641 9669724 -76319210 - L2 LINE L2 -2 3311 3229 375 274 59 52 chr18 9670408 9670715 -76318219 - L1ME2 LINE L1 -1407 5019 4711 336 266 16 65 chr18 9671109 9671360 -76317574 - L1ME2 LINE L1 -2190 4236 4010 29 84 0 0 chr18 9671500 9671571 -76317363 + AT_rich Low_complexity Low_complexity 1 71 0 1840 80 8 8 chr18 9671624 9671861 -76317073 - AluSq SINE Alu -15 298 62 222 0 0 33 chr18 9671890 9671920 -76317014 + (TTTTA)n Simple_repeat Simple_repeat 2 180 0 2203 100 0 0 chr18 9671920 9672201 -76316733 - AluSg SINE Alu 0 311 1 25 31 0 0 chr18 9672491 9672523 -76316411 + AT_rich Low_complexity Low_complexity 1 32 0 1052 226 0 0 chr18 9672523 9672735 -76316199 - AluJo SINE Alu -13 299 88 598 180 10 10 chr18 9672738 9672838 -76316096 - L1MC1 LINE L1 -11 6322 6223 1054 200 136 12 chr18 9674214 9674671 -76314263 - L1ME2 LINE L1 -4311 2115 1502 461 340 46 78 chr18 9675177 9675589 -76313345 - L2 LINE L2 -26 3246 2848 7245 220 47 4 chr18 9675639 9675976 -76312958 - L1 LINE L1 -922 5224 4903 324 70 0 0 chr18 9675976 9676019 -76312915 + (CA)n Simple_repeat Simple_repeat 2 44 0 7245 220 47 4 chr18 9676019 9677379 -76311555 - L1 LINE L1 -1243 4903 3455 2580 182 30 45 chr18 9677486 9677689 -76311245 - L1M4c LINE L1 -3884 2762 2558 189 0 0 0 chr18 9677689 9677710 -76311224 + (CTTG)n Simple_repeat Simple_repeat 4 24 0 845 172 0 0 chr18 9677711 9677833 -76311101 - FLAM_A SINE Alu -11 122 1 2580 182 30 45 chr18 9677833 9678168 -76310766 - L1M4c LINE L1 -4088 2558 2220 2250 173 85 0 chr18 9678168 9678566 -76310368 + MSTB1 LTR MaLR 1 432 0 2580 182 30 45 chr18 9678566 9679089 -76309845 - L1M4c LINE L1 -4426 2220 1621 2273 119 0 0 chr18 9679368 9679663 -76309271 - AluSx SINE Alu -15 297 3 248 146 0 0 chr18 9679699 9679740 -76309194 - Alu SINE Alu -14 288 248 265 256 45 51 chr18 9679749 9679845 -76309089 - L1M4c LINE L1 -6383 159 63 192 77 0 0 chr18 9679845 9679871 -76309063 + (TG)n Simple_repeat Simple_repeat 2 27 0 265 256 45 51 chr18 9679871 9679930 -76309004 - L1M4c LINE L1 -6479 63 5 380 222 0 10 chr18 9679944 9680043 -76308891 - L1MB8 LINE L1 0 6178 6081 346 288 11 34 chr18 9681660 9681837 -76307097 + CT-rich Low_complexity Low_complexity 3 175 0 202 262 36 12 chr18 9682122 9682206 -76306728 + CT-rich Low_complexity Low_complexity 6 91 0 24 0 0 0 chr18 9683714 9683738 -76305196 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr18 9683764 9683784 -76305150 + (A)n Simple_repeat Simple_repeat 1 20 0 21 57 0 0 chr18 9684351 9684386 -76304548 + GC_rich Low_complexity Low_complexity 1 35 0 938 213 221 12 chr18 9687504 9687748 -76301186 - AluSx SINE Alu -5 297 3 230 211 10 106 chr18 9688131 9688235 -76300699 + MIR SINE MIR 17 110 -98 819 205 30 116 chr18 9688777 9689304 -76299630 + L1 LINE L1 3036 3517 -2629 22 0 0 0 chr18 9689557 9689579 -76299355 + AT_rich Low_complexity Low_complexity 1 22 0 31 26 0 0 chr18 9690133 9690171 -76298763 + AT_rich Low_complexity Low_complexity 1 38 0 38 0 0 0 chr18 9690273 9690311 -76298623 + AT_rich Low_complexity Low_complexity 1 38 0 216 0 0 0 chr18 9690346 9690370 -76298564 + (A)n Simple_repeat Simple_repeat 1 24 0 450 332 5 19 chr18 9691083 9691288 -76297646 - AluYa5 SINE Alu -9 302 101 22 0 0 0 chr18 9691537 9691559 -76297375 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr18 9691608 9691637 -76297297 + AT_rich Low_complexity Low_complexity 1 29 0 925 175 0 69 chr18 9692881 9693070 -76295864 + FRAM SINE Alu 1 40 0 22 35 0 0 chr18 9694728 9694757 -76294177 + AT_rich Low_complexity Low_complexity 1 29 0 1909 116 11 0 chr18 9694758 9695026 -76293908 - L1PB1 LINE L1 -1 6150 5880 256 159 45 0 chr18 9695312 9695356 -76293578 - MER75 DNA T2_type 0 504 459 393 254 148 7 chr18 9695408 9695550 -76293384 - L1ME3A LINE L1 -20 6150 5989 339 91 0 0 chr18 9695575 9695619 -76293315 - L1PB2 LINE L1 -58 6093 6050 2058 188 60 11 chr18 9695687 9696154 -76292780 - L1MD2 LINE L1 0 6359 5870 2347 59 0 20 chr18 9696584 9696890 -76292044 + AluY SINE Alu 1 300 -11 697 190 29 63 chr18 9700216 9700390 -76288544 + MER5B DNA MER1_type 4 171 -7 21 0 0 0 chr18 9700744 9700765 -76288169 + AT_rich Low_complexity Low_complexity 1 21 0 2350 89 0 16 chr18 9701513 9701826 -76287108 - AluSc SINE Alu -1 308 1 1909 116 27 20 chr18 9702535 9702828 -76286106 - AluSq SINE Alu -18 295 1 21 36 0 0 chr18 9703551 9703579 -76285355 + AT_rich Low_complexity Low_complexity 1 28 0 1240 132 5 16 chr18 9703711 9703901 -76285033 + AluJb SINE Alu 113 300 -12 256 213 0 0 chr18 9704181 9704228 -76284706 - MER103 DNA DNA -64 102 56 1749 91 4 33 chr18 9704287 9704530 -76284404 + AluSq SINE Alu 1 236 -77 1351 183 116 6 chr18 9704630 9704985 -76283949 - Charlie5 DNA MER1_type -35 2577 2184 298 330 29 0 chr18 9704987 9705090 -76283844 - Charlie5 DNA MER1_type -2506 106 1 676 198 0 101 chr18 9706387 9706635 -76282299 + AluSx SINE Alu 2 224 -88 248 327 19 0 chr18 9706758 9706862 -76282072 + MIR SINE MIR 75 180 -82 1887 125 34 3 chr18 9707699 9707996 -76280938 + AluY SINE Alu 1 306 -5 1684 220 153 18 chr18 9708064 9708559 -76280375 + MER68 LTR ERV1 1 562 0 230 316 102 0 chr18 9709360 9709458 -76279476 + L2 LINE L2 3141 3248 -24 180 0 0 0 chr18 9709468 9709488 -76279446 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 259 184 20 0 chr18 9710049 9710098 -76278836 + MIR SINE MIR 87 136 -72 30 0 0 0 chr18 9710458 9710488 -76278446 + AT_rich Low_complexity Low_complexity 1 30 0 2345 107 3 0 chr18 9710543 9710852 -76278082 - AluSx SINE Alu -2 310 1 219 312 102 57 chr18 9712069 9712226 -76276708 + L2 LINE L2 3108 3271 -1 2208 82 32 3 chr18 9713573 9713855 -76275079 - AluSx SINE Alu -13 299 10 369 0 0 0 chr18 9715707 9715748 -76273186 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 1729 154 4 14 chr18 9715748 9716027 -76272907 - AluJo SINE Alu -36 276 1 423 279 0 0 chr18 9718148 9718259 -76270675 + L1MC4 LINE L1 7932 8042 0 799 183 0 0 chr18 9718503 9718629 -76270305 + FLAM_C SINE Alu 1 126 -7 2533 38 0 0 chr18 9718735 9719022 -76269912 + AluY SINE Alu 1 287 -24 2324 64 0 45 chr18 9719930 9720244 -76268690 + AluY SINE Alu 1 300 -11 23 0 0 0 chr18 9721161 9721184 -76267750 + AT_rich Low_complexity Low_complexity 1 23 0 708 190 29 63 chr18 9723565 9723739 -76265195 + MER5B DNA MER1_type 4 171 -7 21 0 0 0 chr18 9724093 9724114 -76264820 + AT_rich Low_complexity Low_complexity 1 21 0 2236 89 0 16 chr18 9724858 9725171 -76263763 - AluSc SINE Alu -1 308 1 1808 116 27 20 chr18 9725880 9726173 -76262761 - AluSq SINE Alu -18 295 1 21 36 0 0 chr18 9726896 9726924 -76262010 + AT_rich Low_complexity Low_complexity 1 28 0 1161 126 5 21 chr18 9727056 9727247 -76261687 + AluJb SINE Alu 113 300 -12 274 191 0 0 chr18 9727527 9727574 -76261360 - MER103 DNA DNA -64 102 56 2151 95 3 22 chr18 9727633 9727949 -76260985 + AluSx SINE Alu 1 310 -2 1650 215 157 14 chr18 9728017 9728509 -76260425 + MER68 LTR ERV1 1 562 0 226 316 102 0 chr18 9729311 9729409 -76259525 + L2 LINE L2 3141 3248 -24 180 0 0 0 chr18 9729419 9729439 -76259495 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 271 180 0 0 chr18 9730000 9730050 -76258884 + MIR SINE MIR 86 135 -127 29 0 0 0 chr18 9730410 9730439 -76258495 + AT_rich Low_complexity Low_complexity 1 29 0 2241 101 3 3 chr18 9730495 9730803 -76258131 - AluSx SINE Alu -4 308 1 232 289 81 81 chr18 9732028 9732177 -76256757 + L2 LINE L2 3164 3312 -1 208 291 230 7 chr18 9733251 9733399 -76255535 + MIR SINE MIR 12 192 -70 252 59 0 0 chr18 9733784 9733818 -76255116 + (CA)n Simple_repeat Simple_repeat 2 35 0 196 296 51 20 chr18 9734143 9734241 -76254693 - MIR3 SINE MIR -16 192 92 1683 177 0 19 chr18 9735611 9735922 -76253012 + AluJb SINE Alu 1 305 -7 2306 85 0 25 chr18 9736173 9736490 -76252444 - AluSc SINE Alu 0 309 1 352 336 102 34 chr18 9736507 9736772 -76252162 + L3 LINE CR1 1237 1519 -58 207 287 53 11 chr18 9737198 9737292 -76251642 - MIR SINE MIR -117 145 48 2014 121 0 0 chr18 9737871 9738152 -76250782 + AluSx SINE Alu 1 281 -31 2050 108 3 3 chr18 9739959 9740255 -76248679 - AluSx SINE Alu -16 296 1 1693 232 45 60 chr18 9740621 9740810 -76248124 - L1ME LINE L1 -5153 917 727 2218 91 0 0 chr18 9740810 9741106 -76247828 + AluY SINE Alu 1 296 -15 1693 232 45 60 chr18 9741106 9741498 -76247436 - L1ME LINE L1 -5343 727 345 913 252 66 0 chr18 9743268 9743510 -76245424 - MIR SINE MIR -3 259 2 1935 101 30 14 chr18 9744147 9744443 -76244491 - AluSc SINE Alu -8 301 1 571 178 0 25 chr18 9745249 9745367 -76243567 + L1MB8 LINE L1 6064 6178 0 183 42 0 0 chr18 9745730 9745754 -76243180 + (T)n Simple_repeat Simple_repeat 1 24 0 1978 118 0 10 chr18 9745968 9746264 -76242670 + AluSx SINE Alu 17 309 -3 539 274 32 57 chr18 9746293 9746490 -76242444 - L1MCa LINE L1 -3950 2476 2285 3648 111 6 7 chr18 9746490 9747030 -76241904 - L1PB2 LINE L1 0 6151 5613 539 274 32 57 chr18 9747030 9747080 -76241854 - L1MCa LINE L1 -4141 2285 2235 1310 281 103 87 chr18 9747108 9747192 -76241742 - L2 LINE L2 -22 3291 3210 2193 118 0 0 chr18 9747192 9747505 -76241429 + AluSq SINE Alu 1 313 0 1310 281 103 87 chr18 9747505 9747549 -76241385 - L2 LINE L2 -103 3210 3168 180 77 0 0 chr18 9747549 9747575 -76241359 + (TG)n Simple_repeat Simple_repeat 1 26 0 1310 281 103 87 chr18 9747575 9748339 -76240595 - L2 LINE L2 -145 3168 2383 186 43 0 0 chr18 9748339 9748362 -76240572 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1310 281 103 87 chr18 9748362 9748542 -76240392 - L2 LINE L2 -930 2383 2207 19608 63 4 2 chr18 9748557 9751878 -76237056 - L1PA6 LINE L1 0 6154 2828 2234 96 0 3 chr18 9751881 9752193 -76236741 - AluY SINE Alu 0 311 1 2136 108 0 0 chr18 9752870 9753157 -76235777 - AluSc SINE Alu -22 287 1 6324 113 206 106 chr18 9753507 9755049 -76233885 + pTR5 LTR ERV1 743 2438 0 2410 80 3 0 chr18 9756262 9756574 -76232360 + AluSp SINE Alu 1 313 0 1812 156 27 0 chr18 9756588 9756889 -76232045 + AluJb SINE Alu 1 309 -3 2026 161 37 5 chr18 9756993 9757371 -76231563 + MLT1B LTR MaLR 1 390 0 2194 96 6 6 chr18 9758287 9758599 -76230335 - AluSx SINE Alu 0 312 1 1323 194 106 33 chr18 9758733 9759100 -76229834 - MER110A LTR ERV1 -74 394 1 205 272 19 39 chr18 9759516 9759619 -76229315 + C-rich Low_complexity Low_complexity 2 102 0 495 211 44 0 chr18 9760023 9760137 -76228797 - MER96B DNA MER1_type? 0 417 299 2308 81 3 3 chr18 9760760 9761067 -76227867 + AluY SINE Alu 1 307 -4 2018 111 3 3 chr18 9761206 9761494 -76227440 + AluSx SINE Alu 1 288 -24 1642 166 21 0 chr18 9761650 9761939 -76226995 - AluJb SINE Alu -17 295 1 260 291 165 16 chr18 9762343 9762470 -76226464 + MIR SINE MIR 96 241 -21 837 306 35 0 chr18 9763110 9763368 -76225566 - MER69 DNA AcHobo -2251 275 9 363 0 0 0 chr18 9764219 9764260 -76224674 - L1PA5 LINE L1 -95 6059 6019 913 69 46 0 chr18 9764260 9764369 -76224565 + L1PA5 LINE L1 6019 6154 0 2091 106 0 0 chr18 9765142 9765464 -76223470 - AluSx SINE Alu 0 322 1 419 227 98 23 chr18 9765891 9766023 -76222911 - MIR SINE MIR -112 150 9 1671 229 54 16 chr18 9766497 9766938 -76221996 - MLT1C LTR MaLR -8 459 2 475 309 69 48 chr18 9768479 9768812 -76220122 + L2 LINE L2 2170 2509 -805 503 240 10 115 chr18 9768894 9769086 -76219848 - MIR SINE MIR 0 262 91 2069 112 3 6 chr18 9769097 9769409 -76219525 + AluSx SINE Alu 1 311 -1 194 267 93 27 chr18 9769443 9769518 -76219416 - L2 LINE L2 -97 3175 3096 891 293 53 18 chr18 9769703 9770096 -76218838 - MLT1I LTR MaLR 0 409 3 2132 68 21 7 chr18 9770281 9770608 -76218326 + AluY SINE Alu 1 331 0 334 208 28 0 chr18 9770612 9770684 -76218250 - MIR SINE MIR -11 251 178 1046 176 129 58 chr18 9771226 9771521 -76217413 - MSTD LTR MaLR -7 389 74 2326 56 7 10 chr18 9771521 9771823 -76217111 - AluY SINE Alu -10 301 1 2026 110 45 3 chr18 9771823 9772114 -76216820 - AluSx SINE Alu -9 303 1 510 297 67 14 chr18 9772193 9772402 -76216532 + L1M4 LINE L1 3689 3908 -2238 658 159 22 7 chr18 9772403 9772541 -76216393 - Charlie5 DNA MER1_type 0 2624 2485 605 213 33 20 chr18 9772549 9772699 -76216235 - Charlie5 DNA MER1_type -230 2382 2231 601 153 48 32 chr18 9772687 9772811 -76216123 - Charlie5 DNA MER1_type -2485 127 2 * 1244 14 7 0 chr18 9773016 9773159 -76215775 + L1PA5 LINE L1 5998 6141 -13 423 0 0 0 chr18 9773163 9773210 -76215724 + (TA)n Simple_repeat Simple_repeat 2 48 0 2269 100 0 0 chr18 9773235 9773535 -76215399 + AluSc SINE Alu 2 301 -8 618 208 6 40 chr18 9773603 9773776 -76215158 + L1MB8 LINE L1 6008 6174 -4 254 290 199 38 chr18 9773883 9774069 -76214865 - MIR SINE MIR -1 261 46 837 148 112 13 chr18 9775798 9775963 -76212971 - MSTC LTR MaLR -2 424 245 1167 99 18 0 chr18 9775984 9776155 -76212779 + AluSc SINE Alu 135 308 -1 2314 103 0 0 chr18 9776185 9776495 -76212439 + AluSq SINE Alu 3 312 -1 868 274 54 69 chr18 9776619 9777138 -76211796 + MLT1J LTR MaLR 1 511 0 432 55 0 0 chr18 9777673 9777728 -76211206 + (TG)n Simple_repeat Simple_repeat 2 56 0 842 119 0 0 chr18 9777728 9777846 -76211088 - AluSq/x SINE Alu -193 120 3 260 27 27 0 chr18 9778217 9778254 -76210680 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 5495 16 0 0 chr18 9778254 9778864 -76210070 - L1PA3 LINE L1 -13 6142 5533 2157 86 0 38 chr18 9779150 9779464 -76209470 - AluSq SINE Alu -11 302 1 1978 112 7 3 chr18 9779473 9779759 -76209175 - AluSq SINE Alu -26 287 1 229 250 0 0 chr18 9780422 9780470 -76208464 + L1MD1 LINE L1 5547 5594 -527 2190 153 23 20 chr18 9780490 9780888 -76208046 - L1MB3 LINE L1 -3 6180 5782 2181 86 3 10 chr18 9780918 9781222 -76207712 - AluSp SINE Alu -9 304 3 231 279 0 0 chr18 9781224 9781285 -76207649 + L1MD1 LINE L1 5602 5662 -459 395 254 0 43 chr18 9781680 9781818 -76207116 + MER77 LTR ERV1 66 197 -408 905 283 68 50 chr18 9781848 9782053 -76206881 + MER77 LTR ERV1 141 341 -333 1862 136 37 0 chr18 9782053 9782348 -76206586 + AluSx SINE Alu 1 306 -6 905 283 68 50 chr18 9782348 9782691 -76206243 + MER77 LTR ERV1 341 670 -4 2051 143 0 0 chr18 9782751 9783059 -76205875 - AluSx SINE Alu -4 308 1 2045 77 63 3 chr18 9783099 9783384 -76205550 - AluY SINE Alu -8 303 2 2244 74 0 7 chr18 9783472 9783768 -76205166 - AluSc SINE Alu -15 294 1 245 276 0 23 chr18 9783862 9783949 -76204985 + L1MD1 LINE L1 5692 5776 -386 982 172 0 0 chr18 9784050 9784219 -76204715 - FRAM SINE Alu -8 168 1 2225 81 37 0 chr18 9784250 9784548 -76204386 + AluSg SINE Alu 1 309 -1 1642 228 171 13 chr18 9784957 9785511 -76203423 + MLT1E2 LTR MaLR 1 626 0 308 235 106 0 chr18 9785563 9785648 -76203286 + MIR SINE MIR 113 206 -56 24 0 0 0 chr18 9785874 9785898 -76203036 + AT_rich Low_complexity Low_complexity 1 24 0 2317 87 0 0 chr18 9785925 9786223 -76202711 - AluSq SINE Alu -15 298 1 987 101 0 0 chr18 9786806 9786944 -76201990 - AluSp/q SINE Alu -19 294 157 180 0 0 0 chr18 9786999 9787019 -76201915 + (TTA)n Simple_repeat Simple_repeat 3 22 0 2418 51 0 16 chr18 9787049 9787363 -76201571 - AluY SINE Alu -2 309 1 849 97 15 22 chr18 9787365 9787499 -76201435 - AluSq/x SINE Alu -179 133 1 1933 114 0 17 chr18 9787599 9787908 -76201026 + AluSx SINE Alu 1 304 0 198 0 0 0 chr18 9788159 9788181 -76200753 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 2206 105 0 0 chr18 9788468 9788763 -76200171 - AluSq SINE Alu -18 295 1 379 290 39 28 chr18 9788862 9788878 -76200056 + L1MCa LINE L1 2088 2102 -4416 2316 142 24 0 chr18 9788878 9789259 -76199675 + MLT1B LTR MaLR 1 390 0 379 290 39 28 chr18 9789259 9789430 -76199504 + L1MCa LINE L1 2102 2336 -4182 806 146 0 31 chr18 9789511 9789641 -76199293 - FLAM_C SINE Alu -16 127 2 1183 253 100 23 chr18 9790600 9790909 -76198025 + L1MD1 LINE L1 5779 6132 -110 2049 73 11 4 chr18 9790909 9791181 -76197753 + AluSq SINE Alu 24 297 -16 1183 253 100 23 chr18 9791181 9791302 -76197632 + L1MD1 LINE L1 6132 6242 0 310 220 0 0 chr18 9791305 9791364 -76197570 + L1MC4 LINE L1 7845 7903 -139 240 333 44 0 chr18 9791813 9791927 -76197007 + MIR SINE MIR 31 149 -59 288 263 22 51 chr18 9792257 9792394 -76196540 - LTR33 LTR ERVL -134 387 255 614 169 76 120 chr18 9793901 9794085 -76194849 + LTR8 LTR ERV1 1 177 -514 397 95 0 32 chr18 9794090 9794153 -76194781 + MER87 LTR ERV1 116 176 -365 571 172 0 172 chr18 9794153 9794339 -76194595 + LTR8A LTR ERV1 135 288 -439 228 195 0 0 chr18 9794339 9794380 -76194554 + LTR8A LTR ERV1 246 286 -441 962 185 113 91 chr18 9794442 9794858 -76194076 + LTR8A LTR ERV1 303 727 0 399 302 104 25 chr18 9794983 9795185 -76193749 - L2 LINE L2 -1 3312 3095 340 209 52 61 chr18 9795562 9795677 -76193257 - L2 LINE L2 -3 3310 3197 699 306 66 61 chr18 9796019 9796610 -76192324 - L2 LINE L2 -557 2757 2164 1186 185 0 66 chr18 9796976 9797203 -76191731 + MER44D DNA MER2_type 1 212 -493 2028 158 29 3 chr18 9797653 9798000 -76190934 + MER44D DNA MER2_type 194 604 -1 1000 219 0 0 chr18 9798006 9798189 -76190745 + MIR SINE MIR 24 206 -56 709 327 122 29 chr18 9798280 9799314 -76189620 - L2 LINE L2 -1703 1611 482 297 0 0 0 chr18 9801790 9801823 -76187111 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 327 321 18 9 chr18 9801947 9802056 -76186878 - MIR SINE MIR -66 142 33 1888 81 4 15 chr18 9802230 9802491 -76186443 - AluSg SINE Alu -16 294 37 2982 166 46 12 chr18 9804543 9805129 -76183805 + L1MB5 LINE L1 5569 6174 0 331 312 88 12 chr18 9805207 9805377 -76183557 + MIR SINE MIR 28 210 -52 1720 158 35 0 chr18 9806587 9806872 -76182062 + AluJo SINE Alu 1 295 -17 396 250 68 45 chr18 9807538 9807670 -76181264 + MIR3 SINE MIR 64 198 -10 1238 204 73 58 chr18 9808684 9809066 -76179868 + MLT1B LTR MaLR 1 388 -2 695 280 126 0 chr18 9811837 9812051 -76176883 + MIR SINE MIR 1 241 -21 262 278 35 46 chr18 9812095 9812240 -76176694 - MIR SINE MIR -62 146 13 787 100 277 0 chr18 9813591 9813721 -76175213 - AluJb SINE Alu -18 294 129 388 62 0 0 chr18 9813725 9813773 -76175161 - Alu SINE Alu -247 61 14 422 250 24 73 chr18 9813801 9813965 -76174969 - MER103 DNA DNA -3 163 8 230 311 8 76 chr18 9814904 9815036 -76173898 - MIR SINE MIR -67 141 19 2034 103 39 0 chr18 9815075 9815357 -76173577 - AluSx SINE Alu -16 296 4 21 0 0 0 chr18 9816069 9816090 -76172844 + AT_rich Low_complexity Low_complexity 1 21 0 190 235 0 157 chr18 9816604 9816719 -76172215 - MIR3 SINE MIR -6 202 106 2268 79 3 7 chr18 9817134 9817438 -76171496 - AluSp SINE Alu -10 303 1 242 310 106 42 chr18 9817732 9817874 -76171060 + L2 LINE L2 2590 2740 -574 1570 179 3 19 chr18 9818223 9818530 -76170404 - AluJo SINE Alu -10 302 1 290 208 0 21 chr18 9818695 9818791 -76170143 - L1MA7 LINE L1 0 6291 6198 * 552 76 84 84 chr18 9818768 9818887 -76170047 + L1MA7 LINE L1 5727 5845 -446 2141 86 31 3 chr18 9818894 9819186 -76169748 - AluSx SINE Alu -3 309 10 378 0 0 0 chr18 9821036 9821078 -76167856 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 1629 169 0 11 chr18 9821078 9821357 -76167577 - AluJo SINE Alu -36 276 1 437 270 0 0 chr18 9823478 9823589 -76165345 + L1MC4 LINE L1 7932 8042 0 754 183 0 0 chr18 9823833 9823959 -76164975 + FLAM_C SINE Alu 1 126 -7 2428 38 0 0 chr18 9824065 9824352 -76164582 + AluY SINE Alu 1 287 -24 2440 62 0 29 chr18 9825260 9825569 -76163365 + AluY SINE Alu 1 300 -11 697 190 29 63 chr18 9828895 9829069 -76159865 + MER5B DNA MER1_type 4 171 -7 21 0 0 0 chr18 9829423 9829444 -76159490 + AT_rich Low_complexity Low_complexity 1 21 0 2350 89 0 16 chr18 9830192 9830505 -76158429 - AluSc SINE Alu -1 308 1 1909 116 27 20 chr18 9831213 9831506 -76157428 - AluSq SINE Alu -18 295 1 21 36 0 0 chr18 9832229 9832257 -76156677 + AT_rich Low_complexity Low_complexity 1 28 0 1240 132 5 16 chr18 9832389 9832579 -76156355 + AluJb SINE Alu 113 300 -12 256 213 0 0 chr18 9832859 9832906 -76156028 - MER103 DNA DNA -64 102 56 2207 93 6 26 chr18 9832965 9833278 -76155656 + AluSx SINE Alu 1 307 -5 1711 220 151 18 chr18 9833346 9833842 -76155092 + MER68 LTR ERV1 1 562 0 230 316 102 0 chr18 9834644 9834742 -76154192 + L2 LINE L2 3141 3248 -24 180 0 0 0 chr18 9834752 9834772 -76154162 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 268 180 0 0 chr18 9835333 9835383 -76153551 + MIR SINE MIR 86 135 -127 30 0 0 0 chr18 9835743 9835773 -76153161 + AT_rich Low_complexity Low_complexity 1 30 0 2345 107 3 0 chr18 9835828 9836137 -76152797 - AluSx SINE Alu -2 310 1 219 312 102 57 chr18 9837354 9837511 -76151423 + L2 LINE L2 3108 3271 -1 261 57 0 0 chr18 9839116 9839151 -76149783 + (CA)n Simple_repeat Simple_repeat 2 36 0 184 296 51 20 chr18 9839471 9839569 -76149365 - MIR3 SINE MIR -16 192 92 1790 177 0 19 chr18 9840938 9841249 -76147685 + AluJb SINE Alu 1 305 -7 2383 88 0 25 chr18 9841500 9841817 -76147117 - AluSc SINE Alu 0 309 1 316 330 105 35 chr18 9841841 9842099 -76146835 + L3 LINE CR1 1244 1519 -58 200 287 53 11 chr18 9842525 9842619 -76146315 - MIR SINE MIR -117 145 48 2099 125 0 0 chr18 9843198 9843479 -76145455 + AluSx SINE Alu 1 281 -31 287 331 66 6 chr18 9845692 9845873 -76143061 - L1ME LINE L1 -313 5808 5617 25 31 0 0 chr18 9845873 9845905 -76143029 + AT_rich Low_complexity Low_complexity 1 32 0 1739 161 3 13 chr18 9847321 9847620 -76141314 - AluJo SINE Alu -6 306 11 2330 76 0 26 chr18 9847703 9848005 -76140929 - AluY SINE Alu -17 294 1 2268 92 3 0 chr18 9848807 9849099 -76139835 - AluSp SINE Alu -20 293 1 340 321 37 9 chr18 9849781 9849890 -76139044 + L3 LINE CR1 1385 1496 -81 2108 132 10 0 chr18 9849914 9850218 -76138716 + AluSx SINE Alu 1 307 -5 2251 168 3 0 chr18 9850995 9851341 -76137593 - MER7A DNA MER2_type 0 346 2 3154 161 36 28 chr18 9851746 9852361 -76136573 + L1MB3 LINE L1 5302 5921 -262 1064 109 0 0 chr18 9852361 9852533 -76136401 - AluSg/x SINE Alu 0 317 146 1298 183 20 0 chr18 9852550 9852802 -76136132 + L1MB3 LINE L1 5922 6178 -5 274 368 26 0 chr18 9853959 9854073 -76134861 + L2 LINE L2 3155 3271 -1 2104 107 0 0 chr18 9854283 9854554 -76134380 - AluSx SINE Alu -41 271 1 414 197 0 0 chr18 9855351 9855417 -76133517 + Tigger3(Golem) DNA MER2_type 11 76 -2953 300 214 0 18 chr18 9855427 9855483 -76133451 + Tigger3(Golem) DNA MER2_type 2974 3028 -1 182 306 204 27 chr18 9856763 9856910 -76132024 - MER5A DNA MER1_type 0 189 17 1078 90 0 0 chr18 9856925 9857103 -76131831 - AluSx SINE Alu 0 326 149 583 133 12 0 chr18 9857103 9857186 -76131748 - AluSx SINE Alu -227 85 2 2523 61 0 13 chr18 9857530 9857843 -76131091 + AluY SINE Alu 1 309 -2 789 269 71 49 chr18 9858170 9858800 -76130134 - L1MC5 LINE L1 -192 7769 7289 2106 125 3 0 chr18 9859084 9859379 -76129555 - AluSx SINE Alu -16 296 1 2341 94 3 3 chr18 9859385 9859694 -76129240 - AluSp SINE Alu -4 309 1 21 0 0 0 chr18 9859700 9859721 -76129213 + AT_rich Low_complexity Low_complexity 1 21 0 324 0 0 0 chr18 9860030 9860066 -76128868 + (T)n Simple_repeat Simple_repeat 1 36 0 3913 157 52 42 chr18 9860696 9860901 -76128033 + L1MB3 LINE L1 5383 5584 -599 2152 89 4 4 chr18 9860901 9861181 -76127753 + AluSc SINE Alu 1 280 -29 243 0 0 0 chr18 9861184 9861211 -76127723 + (CA)n Simple_repeat Simple_repeat 2 28 0 3913 157 52 42 chr18 9861211 9861793 -76127141 + L1MB3 LINE L1 5585 6182 -1 283 249 52 3 chr18 9861822 9861941 -76126993 - LTR50 LTR ERVL 0 795 400 618 265 24 0 chr18 9863073 9863243 -76125691 - MIR SINE MIR 0 262 89 219 304 35 52 chr18 9863745 9863860 -76125074 - MIR SINE MIR -115 147 35 652 229 147 95 chr18 9865039 9865585 -76123349 - MLT1G LTR MaLR -7 583 10 2246 98 3 0 chr18 9866881 9867176 -76121758 + AluSp SINE Alu 1 296 -17 1530 192 59 70 chr18 9867346 9867804 -76121130 - L1ME2 LINE L1 -9 6155 5703 380 189 22 11 chr18 9867824 9867914 -76121020 - L1MEc LINE L1 -6213 183 93 515 301 64 10 chr18 9867975 9868271 -76120663 - L1ME LINE L1 -298 5823 5512 1886 150 0 24 chr18 9869302 9869596 -76119338 - AluSx SINE Alu -25 287 1 563 103 35 0 chr18 9869652 9869739 -76119195 - L1MC2 LINE L1 -1 6343 6254 2338 93 7 0 chr18 9869780 9870080 -76118854 - AluY SINE Alu -9 302 1 240 160 0 0 chr18 9870761 9870811 -76118123 - L1MB4 LINE L1 -5 6175 6126 3752 124 27 15 chr18 9871039 9871635 -76117299 - L1MB3 LINE L1 -40 6143 5541 202 400 0 0 chr18 9872893 9872973 -76115961 + L2 LINE L2 3229 3308 -5 1760 156 3 11 chr18 9873878 9874160 -76114774 - AluJb SINE Alu -32 280 1 2467 90 0 0 chr18 9875844 9876143 -76112791 + AluSq SINE Alu 1 299 -14 1916 167 68 0 chr18 9876226 9876591 -76112343 - MLT1B LTR MaLR 0 390 1 2202 110 0 28 chr18 9876932 9877250 -76111684 + AluSg SINE Alu 1 309 -1 1930 165 0 13 chr18 9877255 9877571 -76111363 + AluJb SINE Alu 1 312 0 651 197 93 44 chr18 9877687 9877870 -76111064 + MIR SINE MIR 3 194 -68 2064 123 28 0 chr18 9877874 9878159 -76110775 + AluSx SINE Alu 5 297 -15 384 224 196 17 chr18 9878449 9878628 -76110306 + MIR SINE MIR 28 238 -24 2342 68 10 3 chr18 9878942 9879235 -76109699 - AluY SINE Alu -16 295 1 210 284 0 15 chr18 9879517 9879556 -76109378 + (TA)n Simple_repeat Simple_repeat 2 41 -26 2410 87 0 10 chr18 9879556 9879865 -76109069 - AluSx SINE Alu -6 306 1 210 284 0 15 chr18 9879865 9879892 -76109042 + (TA)n Simple_repeat Simple_repeat 41 67 0 243 0 0 0 chr18 9879894 9879921 -76109013 + (CA)n Simple_repeat Simple_repeat 2 28 0 2162 132 19 100 chr18 9879921 9880391 -76108543 - Tigger2a DNA MER2_type -2 432 1 834 332 122 29 chr18 9880446 9880963 -76107971 + L3 LINE CR1 814 1412 -165 1734 148 48 14 chr18 9880963 9881253 -76107681 + AluJb SINE Alu 1 300 -12 834 332 122 29 chr18 9881253 9881422 -76107512 + L3 LINE CR1 1412 1564 -13 4658 129 54 56 chr18 9881519 9881981 -76106953 - L1MC2 LINE L1 -9 6335 5873 2061 113 14 3 chr18 9881981 9882292 -76106642 - AluY SINE Alu 0 314 1 2009 127 7 0 chr18 9882298 9882589 -76106345 - AluSq SINE Alu -20 293 1 1797 168 0 7 chr18 9882590 9882887 -76106047 - AluSx SINE Alu -17 295 1 4658 129 54 56 chr18 9882887 9883305 -76105629 - L1MC2 LINE L1 -475 5869 5446 1878 168 54 16 chr18 9883671 9884057 -76104877 - L1MA9 LINE L1 -31 6281 5881 262 203 0 17 chr18 9885173 9885232 -76103702 - L1ME2 LINE L1 -2 6162 6105 2178 132 3 0 chr18 9885435 9885738 -76103196 + AluSx SINE Alu 1 304 -8 245 233 0 17 chr18 9886287 9886347 -76102587 - L1ME2 LINE L1 -2 6162 6104 433 243 29 0 chr18 9886362 9886479 -76102455 - L1ME2 LINE L1 -499 5665 5558 727 196 0 22 chr18 9886482 9886620 -76102314 + FLAM_C SINE Alu 1 135 -8 465 268 82 16 chr18 9886620 9886803 -76102131 - L1ME2 LINE L1 -596 5566 5372 2172 223 116 48 chr18 9886817 9887637 -76101297 - L1ME2 LINE L1 -813 5333 4458 2413 83 3 0 chr18 9887692 9887992 -76100942 + AluSg SINE Alu 1 301 -9 666 241 60 5 chr18 9888014 9888213 -76100721 + L1M4 LINE L1 4195 4404 -1742 356 242 86 8 chr18 9888250 9888378 -76100556 - L1ME2 LINE L1 -2267 3879 3742 379 87 159 0 chr18 9888964 9889033 -76099901 - L1MB3 LINE L1 0 6183 6104 2143 130 0 10 chr18 9889179 9889478 -76099456 + AluSx SINE Alu 5 300 -12 1563 96 9 22 chr18 9889536 9889765 -76099169 - AluSq SINE Alu -5 308 83 898 281 35 51 chr18 9890801 9890848 -76098086 - L1MC4a LINE L1 -1879 5929 5883 2443 64 0 26 chr18 9890848 9891160 -76097774 - AluY SINE Alu -7 304 1 898 281 35 51 chr18 9891160 9891485 -76097449 - L1MC4a LINE L1 -1925 5883 5563 2472 76 0 7 chr18 9892128 9892431 -76096503 - AluSc SINE Alu -8 301 1 384 273 193 36 chr18 9892995 9893270 -76095664 - L2 LINE L2 0 3313 2996 249 180 0 0 chr18 9893628 9893678 -76095256 + (ATG)n Simple_repeat Simple_repeat 3 52 0 2709 176 64 22 chr18 9893890 9894480 -76094454 - L1MB8 LINE L1 -22 6156 5542 1022 252 5 0 chr18 9894522 9894744 -76094190 + MER58A DNA MER1_type 2 224 0 809 228 12 12 chr18 9895285 9895452 -76093482 + MER58A DNA MER1_type 1 167 0 1858 149 24 3 chr18 9899317 9899606 -76089328 + AluJo SINE Alu 1 295 -17 21 57 0 0 chr18 9900270 9900305 -76088629 + AT_rich Low_complexity Low_complexity 1 35 0 2098 133 0 3 chr18 9900998 9901292 -76087642 + AluSx SINE Alu 1 293 -19 2272 73 31 3 chr18 9901563 9901849 -76087085 - AluSc SINE Alu -15 294 1 578 178 0 25 chr18 9902656 9902774 -76086160 + L1MB8 LINE L1 6064 6178 0 657 227 0 8 chr18 9903332 9903481 -76085453 - AluJb SINE Alu 0 303 156 180 0 0 0 chr18 9904183 9904203 -76084731 + (GGGTG)n Simple_repeat Simple_repeat 3 22 0 2038 222 64 42 chr18 9904360 9904938 -76083996 - L1MC2 LINE L1 -4 7976 6200 24 32 0 0 chr18 9904960 9904991 -76083943 + AT_rich Low_complexity Low_complexity 1 31 0 434 234 37 0 chr18 9905742 9905849 -76083085 + MER5A DNA MER1_type 16 126 -63 731 280 145 26 chr18 9906291 9907074 -76081860 - L1MEc LINE L1 -4541 1855 933 2333 97 0 0 chr18 9907074 9907373 -76081561 - AluSx SINE Alu -13 299 1 731 280 145 26 chr18 9907373 9907488 -76081446 - L1MEc LINE L1 -5463 933 833 1264 271 84 55 chr18 9907544 9908034 -76080900 - L1MC4 LINE L1 0 8042 7516 2140 88 46 0 chr18 9908034 9908318 -76080616 - AluY SINE Alu -14 297 1 1264 271 84 55 chr18 9908318 9908674 -76080260 - L1MC4 LINE L1 -526 7516 7172 249 122 0 0 chr18 9909467 9909508 -76079426 - L2 LINE L2 0 3313 3273 245 275 107 7 chr18 9909685 9909834 -76079100 - L2 LINE L2 -270 3002 2839 1983 136 3 19 chr18 9910891 9911200 -76077734 + AluSx SINE Alu 1 304 -8 193 254 146 0 chr18 9912790 9912845 -76076089 - L2 LINE L2 -1 3271 3209 305 305 46 8 chr18 9912970 9913101 -76075833 + MIR SINE MIR 76 211 -51 415 78 26 0 chr18 9913168 9913245 -76075689 + (TATAA)n Simple_repeat Simple_repeat 5 83 0 1572 183 103 5 chr18 9913257 9913655 -76075279 - Charlie5 DNA MER1_type 0 2620 2184 299 330 29 0 chr18 9913657 9913760 -76075174 - Charlie5 DNA MER1_type -2506 106 1 2355 116 0 0 chr18 9915053 9915363 -76073571 + AluSx SINE Alu 1 310 -2 216 327 19 0 chr18 9915399 9915503 -76073431 + MIR SINE MIR 75 180 -82 2593 51 0 0 chr18 9916340 9916635 -76072299 + AluY SINE Alu 1 295 -16 2263 99 26 7 chr18 9916673 9916975 -76071959 - AluSp SINE Alu -5 308 1 21 0 0 0 chr18 9917801 9917822 -76071112 + AT_rich Low_complexity Low_complexity 1 21 0 2384 92 0 0 chr18 9917828 9918122 -76070812 + AluSx SINE Alu 1 294 -18 22 0 0 0 chr18 9918190 9918212 -76070722 + AT_rich Low_complexity Low_complexity 1 22 0 377 152 40 28 chr18 9920184 9920316 -76068618 - MER53 DNA DNA 0 189 1 2969 148 89 26 chr18 9920532 9921068 -76067866 - L1MB3 LINE L1 0 6183 5606 2014 117 57 0 chr18 9921068 9921350 -76067584 - AluSx SINE Alu -14 298 1 2969 148 89 26 chr18 9921350 9921395 -76067539 - L1MB3 LINE L1 -577 5606 5565 198 173 62 12 chr18 9921401 9921458 -76067476 + MIR SINE MIR 107 166 -96 246 253 116 20 chr18 9921626 9921772 -76067162 + L1 LINE L1 3606 3765 -2381 840 116 27 27 chr18 9921843 9921989 -76066945 - L1MB1 LINE L1 -17 6172 6027 1001 172 0 0 chr18 9921989 9922146 -76066788 - AluSp SINE Alu -10 303 147 2213 66 38 17 chr18 9922856 9923191 -76065743 - AluY SINE Alu 0 311 1 660 102 28 46 chr18 9923522 9923630 -76065304 + U6 snRNA snRNA 2 107 0 180 0 0 0 chr18 9924758 9924778 -76064156 + (TG)n Simple_repeat Simple_repeat 2 21 0 1793 251 75 49 chr18 9924886 9925829 -76063105 + L1MDa LINE L1 1017 1984 -4556 1873 252 183 6 chr18 9925840 9926546 -76062388 + L1ME3 LINE L1 5272 6102 -60 311 224 136 20 chr18 9926454 9926601 -76062333 + L1MA10 LINE L1 6169 6332 -2 * 2584 200 53 50 chr18 9926678 9926756 -76062178 + L1 LINE L1 4021 4097 -2049 2239 121 3 0 chr18 9926756 9927061 -76061873 + AluSx SINE Alu 1 306 -6 2584 200 53 50 chr18 9927061 9927683 -76061251 + L1 LINE L1 4097 4723 -1423 741 130 281 26 chr18 9927687 9927879 -76061055 + L1MB3 LINE L1 5943 6183 0 2175 106 17 0 chr18 9927973 9928266 -76060668 + AluSx SINE Alu 1 298 -14 2564 148 16 39 chr18 9929026 9929458 -76059476 - MSTB LTR MaLR -2 424 3 349 286 154 81 chr18 9930414 9931172 -76057762 - L1M2 LINE L1 -5595 1254 441 3274 166 12 71 chr18 9931669 9932319 -76056615 - LTR9 LTR ERV1 0 612 1 558 248 107 0 chr18 9932932 9933081 -76055853 - AluJb SINE Alu -8 304 140 1616 167 23 23 chr18 9933605 9933905 -76055029 - AluJb SINE Alu -12 300 1 1706 161 7 26 chr18 9933959 9934264 -76054670 - AluJo SINE Alu -13 299 1 4268 97 39 2 chr18 9934361 9934920 -76054014 - LTR19B LTR ERV1 0 580 1 724 218 13 0 chr18 9935009 9935165 -76053769 - L1MA10 LINE L1 -7 6327 6170 2533 140 80 0 chr18 9935516 9935916 -76053018 + MSTB1 LTR MaLR 1 432 0 2501 200 95 30 chr18 9936719 9936844 -76052090 - L1ME2 LINE L1 -132 6032 5917 1753 221 85 11 chr18 9936844 9937278 -76051656 - MER31B LTR ERV1 0 466 1 2501 200 95 30 chr18 9937278 9937678 -76051256 - L1ME2 LINE L1 -247 5917 5445 2385 101 0 0 chr18 9937678 9937986 -76050948 - AluY SINE Alu -3 308 1 2501 200 95 30 chr18 9937986 9938183 -76050751 - L1ME2 LINE L1 -719 5445 5262 210 37 0 0 chr18 9938191 9938218 -76050716 + (CA)n Simple_repeat Simple_repeat 2 28 0 2340 164 87 7 chr18 9939170 9939609 -76049325 - MER101 LTR ERV1 0 474 1 419 117 11 58 chr18 9940063 9940251 -76048683 + (CCA)n Simple_repeat Simple_repeat 1 179 0 473 278 59 53 chr18 9940489 9940676 -76048258 - L2 LINE L2 -803 2511 2324 729 233 39 74 chr18 9940742 9941025 -76047909 + L1MA9 LINE L1 6015 6287 -25 3300 248 25 35 chr18 9942654 9942833 -76046101 - L1ME2 LINE L1 -1048 5098 4919 1686 224 97 62 chr18 9942833 9943368 -76045566 - MLT2B3 LTR ERVL 0 554 1 3300 248 25 35 chr18 9943368 9944234 -76044700 - L1ME2 LINE L1 -1227 4919 4064 563 168 52 192 chr18 9944237 9944266 -76044668 - MER20 DNA MER1_type -4 215 184 2106 120 10 0 chr18 9944266 9944566 -76044368 - AluSx SINE Alu -9 303 1 563 168 52 192 chr18 9944566 9944786 -76044148 - MER20 DNA MER1_type -35 184 1 24 32 0 0 chr18 9945911 9945942 -76042992 + AT_rich Low_complexity Low_complexity 1 31 0 240 273 0 0 chr18 9948512 9948567 -76040367 + (TG)n Simple_repeat Simple_repeat 1 55 0 223 286 0 0 chr18 9948637 9948686 -76040248 + T-rich Low_complexity Low_complexity 3 51 0 2201 106 0 0 chr18 9948807 9949112 -76039822 + AluSx SINE Alu 1 305 0 2197 52 37 0 chr18 9949409 9949723 -76039211 + AluY SINE Alu 1 324 0 451 261 274 10 chr18 9949755 9950058 -76038876 - L2 LINE L2 0 3313 2931 1244 276 150 15 chr18 9950074 9950689 -76038245 - L2 LINE L2 -1018 2296 1599 2288 85 0 0 chr18 9950950 9951294 -76037640 + AluSx SINE Alu 1 344 0 2041 131 0 3 chr18 9952104 9952449 -76036485 + AluSx SINE Alu 1 344 0 4821 173 31 54 chr18 9952646 9954052 -76034882 - L1MD1 LINE L1 0 6636 5243 1036 169 105 5 chr18 9954052 9954271 -76034663 + L1MB3 LINE L1 5934 6174 -9 7167 220 50 26 chr18 9954278 9956118 -76032816 - L1MD1 LINE L1 -1284 5256 3360 2222 118 0 10 chr18 9956118 9956431 -76032503 - AluSx SINE Alu -2 310 1 7167 220 50 26 chr18 9956431 9956688 -76032246 - L1MD1 LINE L1 -3180 3360 3110 2361 81 13 0 chr18 9956694 9956992 -76031942 - AluSg SINE Alu -8 302 1 571 234 102 5 chr18 9956994 9957199 -76031735 - L1MD1 LINE L1 -4118 2422 2198 3730 164 47 21 chr18 9957216 9957924 -76031010 - L1MB3 LINE L1 -8 6175 5450 1498 152 11 0 chr18 9958126 9958389 -76030545 - L1MC3 LINE L1 -2 7783 7518 1281 206 45 15 chr18 9958400 9958793 -76030141 + MLT1C LTR MaLR 9 467 0 1701 178 73 60 chr18 9958793 9959191 -76029743 - L1MC3 LINE L1 -266 7519 7117 * 4640 229 94 67 chr18 9959186 9961319 -76027615 - L1MD1 LINE L1 -4303 2237 75 22 35 0 0 chr18 9961473 9961502 -76027432 + AT_rich Low_complexity Low_complexity 1 29 0 1909 116 11 0 chr18 9961503 9961771 -76027163 - L1PB1 LINE L1 -1 6150 5880 256 159 45 0 chr18 9962057 9962101 -76026833 - MER75 DNA T2_type 0 514 469 393 254 148 7 chr18 9962153 9962295 -76026639 - L1ME3A LINE L1 -20 6150 5989 339 91 0 0 chr18 9962320 9962364 -76026570 - L1PB2 LINE L1 -58 6093 6050 2058 188 60 11 chr18 9962432 9962899 -76026035 - L1MD2 LINE L1 0 6359 5870 2152 94 3 7 chr18 9963329 9963643 -76025291 + AluSq SINE Alu 1 313 0 2042 187 65 48 chr18 9964704 9965163 -76023771 + MLT1C LTR MaLR 1 467 0 1163 279 83 23 chr18 9965698 9966170 -76022764 + L1MC4a LINE L1 5466 5651 -527 2218 121 0 3 chr18 9966376 9966682 -76022252 + AluY SINE Alu 1 305 -6 355 280 8 83 chr18 9966853 9966985 -76021949 - MIR SINE MIR -78 184 63 3668 211 118 31 chr18 9967049 9968091 -76020843 + L1M4 LINE L1 46 1178 -5364 1802 100 0 13 chr18 9968091 9968330 -76020604 + AluSq SINE Alu 1 236 -77 368 192 29 19 chr18 9968330 9968434 -76020500 + L1MB2 LINE L1 6067 6171 0 1876 155 0 17 chr18 9968652 9968949 -76019985 + AluJo SINE Alu 3 294 -18 1519 107 0 81 chr18 9968963 9969197 -76019737 + AluSx SINE Alu 5 219 -93 230 320 62 98 chr18 9969229 9969454 -76019480 + L2 LINE L2 3017 3233 -39 784 261 96 4 chr18 9971434 9971664 -76017270 - MIR SINE MIR 0 262 12 192 40 0 0 chr18 9971715 9971740 -76017194 + (GA)n Simple_repeat Simple_repeat 2 26 0 225 237 158 0 chr18 9972410 9972486 -76016448 + MIR3 SINE MIR 107 194 -14 194 323 62 0 chr18 9972723 9972788 -76016146 + L2 LINE L2 3244 3312 -1 1907 155 28 0 chr18 9972822 9973112 -76015822 + AluJb SINE Alu 3 300 -12 913 249 65 0 chr18 9973752 9973997 -76014937 + MIR SINE MIR 2 262 0 1687 228 46 63 chr18 9975762 9976155 -76012779 + L1ME LINE L1 345 726 -5344 2325 91 0 0 chr18 9976155 9976451 -76012483 - AluY SINE Alu -15 296 1 1687 228 46 63 chr18 9976451 9976640 -76012294 + L1ME LINE L1 726 917 -5153 2134 124 3 0 chr18 9977006 9977304 -76011630 + AluSx SINE Alu 1 299 -13 338 283 203 11 chr18 9977839 9978016 -76010918 - MIR SINE MIR -13 249 39 26 50 0 0 chr18 9978579 9978619 -76010315 + AT_rich Low_complexity Low_complexity 1 40 0 3593 17 10 0 chr18 9982039 9982445 -76006489 - L1PA3 LINE L1 0 6155 5746 318 132 0 0 chr18 9982538 9982591 -76006343 + (CA)n Simple_repeat Simple_repeat 2 54 0 262 301 255 10 chr18 9984493 9984689 -76004245 - MIR SINE MIR -6 256 13 396 227 0 0 chr18 9984909 9985006 -76003928 - MIR SINE MIR 0 262 166 359 313 45 25 chr18 9985542 9985740 -76003194 + MIR SINE MIR 25 226 -36 180 77 0 0 chr18 9988090 9988116 -76000818 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 534 275 7 14 chr18 9988517 9988659 -76000275 + MIR SINE MIR 28 168 -94 2457 76 0 3 chr18 9989445 9989749 -75999185 + AluY SINE Alu 1 303 -8 22 0 0 0 chr18 9990741 9990763 -75998171 + AT_rich Low_complexity Low_complexity 1 22 0 2400 110 0 0 chr18 9990985 9991294 -75997640 + AluSq SINE Alu 2 310 -3 786 157 0 7 chr18 9991568 9991708 -75997226 - L1MB8 LINE L1 0 6178 6040 21 71 0 0 chr18 9992816 9992858 -75996076 + AT_rich Low_complexity Low_complexity 1 42 0 298 136 23 0 chr18 9994830 9994874 -75994060 - Alu SINE Alu -263 45 1 2308 89 0 3 chr18 9994949 9995242 -75993692 + AluSx SINE Alu 3 294 -18 1840 144 0 66 chr18 9996408 9996728 -75992206 + AluJo SINE Alu 1 299 -13 2343 70 0 7 chr18 9996909 9997217 -75991717 - AluY SINE Alu 0 306 1 1860 161 0 32 chr18 9997339 9997649 -75991285 - AluJo SINE Alu -12 300 1 21 0 0 0 chr18 9997658 9997679 -75991255 + AT_rich Low_complexity Low_complexity 1 21 0 579 325 60 5 chr18 9998194 9998394 -75990540 - MIR SINE MIR -6 256 46 1744 138 135 12 chr18 9998929 9999263 -75989671 + THE1C LTR MaLR 1 375 0 24 77 0 0 chr18 9999869 9999921 -75989013 + AT_rich Low_complexity Low_complexity 1 52 0 2251 98 0 3 chr18 10000123 10000418 -75988516 + AluSx SINE Alu 1 294 -18 1093 161 12 86 chr18 10000770 10001094 -75987840 + AluY SINE Alu 2 301 0 1563 96 9 22 chr18 10002178 10002407 -75986527 + AluSq SINE Alu 83 308 -5 2143 130 0 10 chr18 10002465 10002764 -75986170 - AluSx SINE Alu -12 300 5 343 88 176 0 chr18 10002910 10002978 -75985956 + L1MB3 LINE L1 6104 6183 0 356 242 86 8 chr18 10003564 10003692 -75985242 + L1MB8 LINE L1 3742 3879 -2267 666 241 60 5 chr18 10003729 10003928 -75985006 - L1M4 LINE L1 -1742 4404 4195 2307 75 31 3 chr18 10003950 10004242 -75984692 - AluSc SINE Alu -9 300 1 578 178 0 25 chr18 10005049 10005167 -75983767 + L1MB8 LINE L1 6064 6178 0 6530 60 23 14 chr18 10005799 10006655 -75982279 + SVA Other Other 523 1386 0 2698 191 102 48 chr18 10006663 10006944 -75981990 + L1MB8 LINE L1 4942 5206 -972 2546 69 0 3 chr18 10006944 10007250 -75981684 + AluY SINE Alu 1 305 -6 2698 191 102 48 chr18 10007250 10007895 -75981039 + L1MB8 LINE L1 5206 5950 -228 1996 121 0 49 chr18 10007895 10008201 -75980733 + AluSq SINE Alu 1 291 -22 2698 191 102 48 chr18 10008201 10008442 -75980492 + L1MB8 LINE L1 5950 6176 -2 1810 162 3 35 chr18 10008830 10009145 -75979789 - AluJo SINE Alu -7 305 1 2374 59 41 0 chr18 10010303 10010593 -75978341 + AluY SINE Alu 1 302 -9 2187 101 0 39 chr18 10010692 10010999 -75977935 + AluSx SINE Alu 1 295 -17 2250 103 7 0 chr18 10011142 10011444 -75977490 - AluSg SINE Alu -6 304 1 292 258 165 21 chr18 10011487 10011584 -75977350 - L2 LINE L2 0 3313 3203 2037 116 7 7 chr18 10012324 10012655 -75976279 + AluSx SINE Alu 1 331 0 488 231 90 64 chr18 10013485 10013530 -75975404 + MER5B DNA MER1_type 2 44 -134 2378 81 0 7 chr18 10013530 10013827 -75975107 - AluSc SINE Alu -14 295 1 488 231 90 64 chr18 10013827 10013937 -75974997 + MER5B DNA MER1_type 44 161 -17 2437 71 0 0 chr18 10014289 10014585 -75974349 - AluY SINE Alu -15 296 1 189 107 0 0 chr18 10014776 10014804 -75974130 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 2547 63 0 0 chr18 10014909 10015211 -75973723 + AluY SINE Alu 10 311 0 2141 109 0 26 chr18 10015232 10015535 -75973399 + AluSg SINE Alu 10 304 -6 2069 107 73 0 chr18 10015546 10015835 -75973099 + AluSq SINE Alu 1 310 -3 2241 82 3 43 chr18 10017069 10017373 -75971561 + AluSg SINE Alu 1 292 -18 2120 132 3 0 chr18 10017707 10018010 -75970924 + AluSx SINE Alu 1 304 -8 23 33 0 0 chr18 10019221 10019251 -75969683 + AT_rich Low_complexity Low_complexity 1 30 0 239 114 23 0 chr18 10019763 10019807 -75969127 + (TA)n Simple_repeat Simple_repeat 1 45 0 2378 75 7 0 chr18 10019809 10020102 -75968832 - AluSp SINE Alu -18 295 1 2610 49 0 3 chr18 10020962 10021267 -75967667 + AluY SINE Alu 1 304 -7 404 295 170 15 chr18 10021386 10021586 -75967348 - MIR SINE MIR 0 262 32 519 257 70 0 chr18 10021690 10021861 -75967073 - MIR SINE MIR -15 247 65 1904 75 44 48 chr18 10022856 10023149 -75965785 + AluSg SINE Alu 1 292 -18 392 86 74 0 chr18 10023940 10024021 -75964913 + CT-rich Low_complexity Low_complexity 1 87 0 22 35 0 0 chr18 10024468 10024497 -75964437 + GC_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr18 10024763 10024796 -75964138 + GC_rich Low_complexity Low_complexity 1 33 0 222 37 0 0 chr18 10025041 10025068 -75963866 + (CCCCG)n Simple_repeat Simple_repeat 4 30 0 26 0 0 0 chr18 10025571 10025597 -75963337 + AT_rich Low_complexity Low_complexity 1 26 0 2371 78 0 10 chr18 10025666 10025962 -75962972 + AluSx SINE Alu 5 297 -15 2408 54 0 10 chr18 10026637 10026933 -75962001 + AluY SINE Alu 9 301 -10 2284 101 0 0 chr18 10027639 10027926 -75961008 + AluSq SINE Alu 1 287 -26 25 0 0 0 chr18 10027926 10027951 -75960983 + AT_rich Low_complexity Low_complexity 1 25 0 255 181 347 0 chr18 10028099 10028171 -75960763 + MIR SINE MIR 71 167 -95 * 333 299 82 20 chr18 10028166 10028313 -75960621 - L2 LINE L2 -1 3271 3116 2376 83 0 0 chr18 10028421 10028721 -75960213 + AluY SINE Alu 1 300 -11 213 295 26 0 chr18 10028721 10028799 -75960135 + MIR SINE MIR 169 248 -14 1383 140 6 125 chr18 10028809 10029130 -75959804 - AluJb SINE Alu -2 310 28 23 33 0 0 chr18 10029162 10029192 -75959742 + AT_rich Low_complexity Low_complexity 1 30 0 405 216 29 10 chr18 10029280 10029382 -75959552 - MER5A DNA MER1_type -76 113 10 709 224 12 6 chr18 10029404 10029574 -75959360 - MER5B DNA MER1_type -5 173 3 1840 207 41 64 chr18 10030099 10030615 -75958319 + MLT1D LTR MaLR 2 505 0 1780 192 14 32 chr18 10031080 10031450 -75957484 - MLT1A2 LTR MaLR 0 374 12 334 200 0 0 chr18 10031446 10031506 -75957428 - AluSp SINE Alu -107 196 137 * 433 279 56 84 chr18 10031641 10031892 -75957042 + MIR SINE MIR 13 256 -6 1805 117 18 18 chr18 10032438 10032712 -75956222 - AluSg SINE Alu 0 310 37 2346 99 0 0 chr18 10032852 10033156 -75955778 - AluY SINE Alu -7 304 1 2201 107 14 0 chr18 10033156 10033445 -75955489 - AluSg SINE Alu -17 293 1 280 348 0 18 chr18 10033793 10033905 -75955029 + MIR SINE MIR 34 143 -65 1722 149 53 3 chr18 10033942 10034224 -75954710 + AluSx SINE Alu 1 296 -16 354 272 96 0 chr18 10034373 10034509 -75954425 + L2 LINE L2 1154 1302 -2012 286 237 54 11 chr18 10034564 10034657 -75954277 + L2 LINE L2 2965 3061 -211 2006 113 46 36 chr18 10036317 10036475 -75952459 - AluSx SINE Alu -7 305 141 2446 60 0 13 chr18 10036475 10036776 -75952158 - AluY SINE Alu -14 297 1 2006 113 46 36 chr18 10036776 10036919 -75952015 - AluSx SINE Alu -171 141 1 23 0 0 0 chr18 10036957 10036980 -75951954 + AT_rich Low_complexity Low_complexity 1 23 0 2179 92 27 7 chr18 10037680 10037975 -75950959 - AluSq SINE Alu -12 301 1 213 370 0 0 chr18 10037988 10038069 -75950865 - MIR SINE MIR -111 151 71 644 232 18 30 chr18 10038080 10038244 -75950690 - MLT1I LTR MaLR -15 534 373 330 264 40 8 chr18 10038464 10038589 -75950345 - MIR SINE MIR -19 243 115 1011 256 158 14 chr18 10038917 10039265 -75949669 - MLT1I LTR MaLR -11 398 1 353 311 10 10 chr18 10040910 10041013 -75947921 + MLT1L LTR MaLR 95 197 -418 780 253 45 8 chr18 10041039 10041284 -75947650 - L1ME1 LINE L1 -6 6160 5907 2084 91 58 0 chr18 10041503 10041777 -75947157 - AluSp SINE Alu -22 291 2 2237 112 0 0 chr18 10041782 10042077 -75946857 - AluSx SINE Alu -17 295 1 180 0 0 0 chr18 10043170 10043190 -75945744 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1103 226 187 16 chr18 10043190 10043570 -75945364 - L1ME1 LINE L1 -251 5915 5471 1116 109 38 16 chr18 10043570 10043740 -75945194 - AluSc SINE Alu -3 306 130 2677 48 0 10 chr18 10043740 10044054 -75944880 - AluY SINE Alu 0 311 1 1116 109 38 16 chr18 10044054 10044067 -75944867 - AluSc SINE Alu -179 130 119 2212 101 10 7 chr18 10044296 10044604 -75944330 + AluSc SINE Alu 1 309 0 686 262 45 55 chr18 10046150 10046440 -75942494 + L1ME2 LINE L1 5868 6154 -10 1019 103 0 0 chr18 10046558 10046694 -75942240 + L1P4 LINE L1 5435 5570 -596 413 153 0 0 chr18 10046694 10046766 -75942168 + AluS SINE Alu 229 300 -9 28 0 0 0 chr18 10047595 10047623 -75941311 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr18 10047955 10047983 -75940951 + AT_rich Low_complexity Low_complexity 1 28 0 2342 82 14 0 chr18 10048783 10049075 -75939859 - AluSx SINE Alu -16 296 1 2390 93 3 10 chr18 10049378 10049689 -75939245 + AluSx SINE Alu 1 309 -3 254 146 0 0 chr18 10049748 10049796 -75939138 - AluSp/q SINE Alu -5 298 251 2513 71 0 3 chr18 10050997 10051307 -75937627 - AluY SINE Alu -2 309 1 237 357 23 23 chr18 10051682 10051811 -75937123 - L2 LINE L2 -10 3262 3134 326 211 218 8 chr18 10052344 10052477 -75936457 + MIR3 SINE MIR 47 207 -1 283 338 130 5 chr18 10053309 10053525 -75935409 + MIR SINE MIR 20 262 0 30 27 0 0 chr18 10054076 10054113 -75934821 + AT_rich Low_complexity Low_complexity 1 37 0 1704 163 10 24 chr18 10054113 10054408 -75934526 - AluJo SINE Alu -18 294 4 895 178 25 0 chr18 10054450 10054613 -75934321 + FRAM SINE Alu 1 167 -9 1702 139 15 11 chr18 10054687 10054961 -75933973 + AluSq SINE Alu 1 275 -38 358 202 10 10 chr18 10056231 10056335 -75932599 + GA-rich Low_complexity Low_complexity 1 104 0 434 231 48 0 chr18 10057275 10057379 -75931555 + MER45A DNA AcHobo 70 178 0 426 295 51 26 chr18 10057847 10057942 -75930992 + L2 LINE L2 1784 1875 -1439 2157 95 34 7 chr18 10057942 10058238 -75930696 + AluSc SINE Alu 1 304 -5 426 295 51 26 chr18 10058238 10058376 -75930558 + L2 LINE L2 1875 2023 -1291 2417 52 7 0 chr18 10058724 10059012 -75929922 + AluY SINE Alu 1 290 -21 1830 159 7 7 chr18 10059364 10059666 -75929268 - AluSx SINE Alu -10 302 1 332 182 20 50 chr18 10059690 10059789 -75929145 - MER5A DNA MER1_type -55 134 39 1818 82 0 25 chr18 10059793 10060038 -75928896 + AluY SINE Alu 65 303 -8 887 179 20 56 chr18 10060437 10060689 -75928245 + L1M4 LINE L1 4396 4638 -1508 330 26 0 0 chr18 10060709 10060748 -75928186 + (TC)n Simple_repeat Simple_repeat 1 39 0 2237 92 3 3 chr18 10061377 10061671 -75927263 + AluSg SINE Alu 1 294 -16 1375 206 87 0 chr18 10061984 10062236 -75926698 + AluJb SINE Alu 1 274 -38 192 40 0 0 chr18 10062237 10062262 -75926672 + (TC)n Simple_repeat Simple_repeat 1 25 0 331 305 18 24 chr18 10062315 10062479 -75926455 + L1M4 LINE L1 17 179 -6363 3215 192 95 58 chr18 10062877 10063412 -75925522 + L1MB8 LINE L1 4398 4912 -1266 10253 28 8 172 chr18 10063412 10065070 -75923864 + SVA Other Other 1 1386 0 3215 192 95 58 chr18 10065070 10065359 -75923575 + L1MB8 LINE L1 4912 5189 -989 2546 69 0 3 chr18 10065359 10065665 -75923269 + AluY SINE Alu 1 305 -6 3215 192 95 58 chr18 10065665 10066310 -75922624 + L1MB8 LINE L1 5189 5945 -233 1996 121 0 49 chr18 10066310 10066616 -75922318 + AluSq SINE Alu 1 291 -22 3215 192 95 58 chr18 10066616 10066857 -75922077 + L1MB8 LINE L1 5945 6176 -2 1810 162 3 35 chr18 10067245 10067560 -75921374 - AluJo SINE Alu -7 305 1 2374 59 41 0 chr18 10068718 10069008 -75919926 + AluY SINE Alu 1 302 -9 2187 101 0 39 chr18 10069107 10069414 -75919520 + AluSx SINE Alu 1 295 -17 2250 103 7 0 chr18 10069557 10069859 -75919075 - AluSg SINE Alu -6 304 1 292 258 165 21 chr18 10069902 10069999 -75918935 - L2 LINE L2 0 3313 3203 2037 116 7 7 chr18 10070739 10071070 -75917864 + AluSx SINE Alu 1 331 0 488 231 90 64 chr18 10071900 10071945 -75916989 + MER5B DNA MER1_type 2 44 -134 2378 81 0 7 chr18 10071945 10072242 -75916692 - AluSc SINE Alu -14 295 1 488 231 90 64 chr18 10072242 10072352 -75916582 + MER5B DNA MER1_type 44 161 -17 2468 68 0 0 chr18 10072704 10073000 -75915934 - AluY SINE Alu -15 296 1 189 107 0 0 chr18 10073191 10073219 -75915715 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 2547 63 0 0 chr18 10073324 10073626 -75915308 + AluY SINE Alu 10 311 0 2141 109 0 26 chr18 10073647 10073950 -75914984 + AluSg SINE Alu 10 304 -6 2069 107 73 0 chr18 10073961 10074250 -75914684 + AluSq SINE Alu 1 310 -3 2206 82 3 46 chr18 10075484 10075789 -75913145 + AluSg SINE Alu 1 292 -18 2120 132 3 0 chr18 10076123 10076426 -75912508 + AluSx SINE Alu 1 304 -8 23 33 0 0 chr18 10077637 10077667 -75911267 + AT_rich Low_complexity Low_complexity 1 30 0 239 114 23 0 chr18 10078179 10078223 -75910711 + (TA)n Simple_repeat Simple_repeat 2 46 0 2378 75 7 0 chr18 10078225 10078518 -75910416 - AluSp SINE Alu -18 295 1 2473 49 0 3 chr18 10079378 10079683 -75909251 + AluY SINE Alu 1 304 -7 480 311 160 14 chr18 10079802 10080021 -75908913 - MIR SINE MIR 0 262 12 593 257 70 0 chr18 10080106 10080277 -75908657 - MIR SINE MIR -15 247 65 1764 72 48 48 chr18 10081272 10081564 -75907370 + AluSg SINE Alu 1 292 -18 392 86 74 0 chr18 10082355 10082436 -75906498 + CT-rich Low_complexity Low_complexity 1 87 0 26 30 0 0 chr18 10083176 10083209 -75905725 + GC_rich Low_complexity Low_complexity 1 33 0 222 37 0 0 chr18 10083454 10083481 -75905453 + (CCCCG)n Simple_repeat Simple_repeat 4 30 0 26 0 0 0 chr18 10083984 10084010 -75904924 + AT_rich Low_complexity Low_complexity 1 26 0 2242 78 0 10 chr18 10084079 10084375 -75904559 + AluSx SINE Alu 5 297 -15 2282 54 0 10 chr18 10085050 10085346 -75903588 + AluY SINE Alu 9 301 -10 421 291 100 73 chr18 10085814 10086052 -75902882 + L1ME4a LINE L1 5685 5936 -185 2155 101 0 0 chr18 10086052 10086339 -75902595 + AluSq SINE Alu 1 287 -26 421 291 100 73 chr18 10086339 10086440 -75902494 + L1ME4a LINE L1 5936 6033 -88 298 280 256 0 chr18 10086459 10086584 -75902350 + MIR SINE MIR 11 167 -95 * 382 299 82 20 chr18 10086579 10086726 -75902208 - L2 LINE L2 -1 3271 3116 2254 83 0 0 chr18 10086834 10087134 -75901800 + AluY SINE Alu 1 300 -11 249 295 26 0 chr18 10087134 10087212 -75901722 + MIR SINE MIR 169 248 -14 1277 140 6 125 chr18 10087222 10087543 -75901391 - AluJb SINE Alu -2 310 28 23 33 0 0 chr18 10087575 10087605 -75901329 + AT_rich Low_complexity Low_complexity 1 30 0 448 216 29 10 chr18 10087693 10087795 -75901139 - MER5A DNA MER1_type -76 113 10 779 224 12 6 chr18 10087817 10087987 -75900947 - MER5B DNA MER1_type -5 173 3 1837 207 41 64 chr18 10088512 10089028 -75899906 + MLT1D LTR MaLR 2 505 0 1757 195 14 32 chr18 10089493 10089863 -75899071 - MLT1A2 LTR MaLR 0 374 12 311 186 17 0 chr18 10089859 10089918 -75899016 - AluSp SINE Alu -107 196 137 * 521 279 56 84 chr18 10090053 10090304 -75898630 + MIR SINE MIR 13 256 -6 1696 117 18 18 chr18 10090850 10091124 -75897810 - AluSg SINE Alu 0 310 37 2079 106 7 0 chr18 10091264 10091566 -75897368 - AluY SINE Alu -7 304 1 2076 107 14 0 chr18 10091566 10091855 -75897079 - AluSg SINE Alu -17 293 1 319 348 0 18 chr18 10092203 10092315 -75896619 + MIR SINE MIR 34 143 -65 1609 149 53 3 chr18 10092352 10092634 -75896300 + AluSx SINE Alu 1 296 -16 409 272 96 0 chr18 10092783 10092919 -75896015 + L2 LINE L2 1154 1302 -2012 316 283 17 25 chr18 10092947 10093067 -75895867 + L2 LINE L2 2943 3061 -211 193 327 0 0 chr18 10093275 10093330 -75895604 - MIR SINE MIR -18 244 190 1884 113 46 36 chr18 10094727 10094885 -75894049 - AluSx SINE Alu -7 305 141 2313 60 0 13 chr18 10094885 10095186 -75893748 - AluY SINE Alu -14 297 1 1884 113 46 36 chr18 10095186 10095329 -75893605 - AluSx SINE Alu -171 141 1 23 0 0 0 chr18 10095367 10095390 -75893544 + AT_rich Low_complexity Low_complexity 1 23 0 269 342 45 26 chr18 10096030 10096090 -75892844 - MIR SINE MIR -34 228 171 2051 92 27 7 chr18 10096090 10096385 -75892549 - AluSq SINE Alu -12 301 1 269 342 45 26 chr18 10096385 10096479 -75892455 - MIR SINE MIR -91 171 71 650 232 18 30 chr18 10096490 10096654 -75892280 - MLT1I LTR MaLR -15 534 373 407 294 33 13 chr18 10096874 10097027 -75891907 - MIR SINE MIR -19 243 88 1018 256 158 14 chr18 10097327 10097675 -75891259 - MLT1I LTR MaLR -11 398 1 353 311 10 10 chr18 10099320 10099423 -75889511 + MLT1L LTR MaLR 95 197 -418 774 253 45 8 chr18 10099449 10099694 -75889240 - L1ME1 LINE L1 -6 6160 5907 1960 91 58 0 chr18 10099913 10100187 -75888747 - AluSp SINE Alu -22 291 2 2114 112 0 0 chr18 10100192 10100487 -75888447 - AluSx SINE Alu -17 295 1 180 0 0 0 chr18 10101580 10101600 -75887334 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1612 182 89 95 chr18 10101600 10101980 -75886954 - L1ME1 LINE L1 -251 5915 5510 1940 110 23 23 chr18 10101980 10102150 -75886784 - AluSx SINE Alu -3 309 137 2597 29 0 10 chr18 10102150 10102464 -75886470 - AluY SINE Alu 0 311 1 1940 110 23 23 chr18 10102464 10102602 -75886332 - AluSx SINE Alu -174 138 1 1612 182 89 95 chr18 10102602 10102935 -75885999 - L1ME1 LINE L1 -656 5510 5176 1968 124 0 0 chr18 10102935 10103238 -75885696 - AluSx SINE Alu 0 303 1 2951 167 13 54 chr18 10103261 10103735 -75885199 - L1MC3 LINE L1 -21 7764 7272 252 0 0 0 chr18 10103735 10103763 -75885171 + (CA)n Simple_repeat Simple_repeat 1 28 0 2951 167 13 54 chr18 10103763 10103793 -75885141 - L1MC3 LINE L1 -513 7272 7242 2336 91 0 0 chr18 10103793 10104102 -75884832 - AluSc SINE Alu 0 309 1 2951 167 13 54 chr18 10104102 10104225 -75884709 - L1MC3 LINE L1 -543 7242 7162 760 131 10 30 chr18 10104227 10104377 -75884557 + MSTC LTR MaLR 1 150 -215 1911 112 0 39 chr18 10104384 10104519 -75884415 + AluSq SINE Alu 1 140 -173 2242 67 0 51 chr18 10104519 10104834 -75884100 + AluY SINE Alu 1 299 -12 1911 112 0 39 chr18 10104834 10105003 -75883931 + AluSq SINE Alu 140 293 -20 501 237 40 7 chr18 10105087 10105239 -75883695 + L1M4 LINE L1 3880 4036 -2110 750 199 13 13 chr18 10105247 10105398 -75883536 - MLT1A1 LTR MaLR 0 365 215 2342 281 77 27 chr18 10105410 10105884 -75883050 - L1MEc LINE L1 -2311 3904 3455 2072 118 3 0 chr18 10105884 10106189 -75882745 - AluSq SINE Alu -7 306 1 1964 135 0 0 chr18 10106190 10106493 -75882441 - AluSx SINE Alu -7 305 3 2342 281 77 27 chr18 10106493 10109089 -75879845 - L1MEc LINE L1 -2759 3456 625 896 241 148 0 chr18 10109148 10109418 -75879516 + MLT1L LTR MaLR 306 615 0 2096 110 3 3 chr18 10109486 10109785 -75879149 - AluSx SINE Alu -8 304 6 204 283 131 10 chr18 10110390 10110489 -75878445 + MIR SINE MIR 38 148 -60 535 349 11 31 chr18 10110690 10110951 -75877983 + MIR SINE MIR 7 262 0 6924 57 282 0 chr18 10110966 10112044 -75876890 + SVA Other Other 3 1384 -2 1979 90 66 0 chr18 10113315 10113603 -75875331 + AluSq SINE Alu 1 307 -6 1158 80 145 0 chr18 10114018 10114197 -75874737 + LTR12 LTR ERV1 1 189 -525 1565 180 3 18 chr18 10114198 10114481 -75874453 - AluJo SINE Alu -33 279 1 2144 145 73 57 chr18 10114580 10115034 -75873900 - LOR1b LTR ERV1 0 461 1 2268 94 3 0 chr18 10115061 10115360 -75873574 + AluSp SINE Alu 1 300 -13 2064 155 28 6 chr18 10115477 10115832 -75873102 + MLT1A1 LTR MaLR 1 363 -2 2217 84 20 0 chr18 10115856 10116153 -75872781 + AluSc SINE Alu 1 303 -6 220 311 167 41 chr18 10117004 10117489 -75871445 + L2 LINE L2 1965 2510 -804 525 200 14 7 chr18 10117507 10117562 -75871372 + CT-rich Low_complexity Low_complexity 4 57 -92 2284 94 0 0 chr18 10117562 10117871 -75871063 - AluSc SINE Alu 0 309 1 525 200 14 7 chr18 10117871 10117960 -75870974 + CT-rich Low_complexity Low_complexity 57 149 0 1164 225 64 31 chr18 10118113 10118432 -75870502 + L1ME1 LINE L1 5830 6159 -7 2409 66 0 0 chr18 10119020 10119325 -75869609 + AluY SINE Alu 1 305 -6 2027 80 33 17 chr18 10119840 10120139 -75868795 - AluSx SINE Alu -8 304 1 270 56 0 0 chr18 10120166 10120202 -75868732 + (TG)n Simple_repeat Simple_repeat 2 37 0 1962 102 0 71 chr18 10120275 10120597 -75868337 + AluSq SINE Alu 1 299 -14 2234 104 7 0 chr18 10120598 10120905 -75868029 + AluSc SINE Alu 1 309 0 2093 91 0 20 chr18 10121893 10122191 -75866743 + AluSg SINE Alu 2 293 -17 1848 249 105 20 chr18 10122519 10123158 -75865776 + L1MEc LINE L1 100 792 -5604 1416 227 21 56 chr18 10123152 10123636 -75865298 + L1ME1 LINE L1 5695 6161 -5 * 2489 68 0 0 chr18 10123638 10123947 -75864987 - AluY SINE Alu -2 309 1 279 245 58 108 chr18 10124117 10124256 -75864678 - MIR3 SINE MIR -68 140 9 1960 99 67 0 chr18 10125349 10125632 -75863302 - AluSq SINE Alu -11 302 1 259 172 62 31 chr18 10125799 10125863 -75863071 - L1ME3A LINE L1 -221 5949 5884 708 54 33 0 chr18 10125866 10125958 -75862976 - AluY SINE Alu -14 297 203 1622 62 9 5 chr18 10125962 10126172 -75862762 + AluY SINE Alu 92 302 -9 309 286 45 23 chr18 10126275 10126408 -75862526 - L1MEc LINE L1 -3426 2789 2654 1629 134 10 35 chr18 10126565 10126855 -75862079 - L1MA7 LINE L1 -428 5863 5581 1749 179 32 29 chr18 10126857 10127265 -75861669 + L1MA7 LINE L1 5883 6291 0 2004 89 18 61 chr18 10127304 10127631 -75861303 + AluSq SINE Alu 1 313 0 2104 103 7 0 chr18 10127657 10127949 -75860985 + AluSp SINE Alu 1 294 -19 2334 92 7 0 chr18 10129285 10129578 -75859356 + AluSg SINE Alu 1 295 -15 462 279 159 30 chr18 10129813 10130411 -75858523 + L2 LINE L2 2367 3047 -225 1320 232 21 57 chr18 10130738 10131212 -75857722 - L1ME1 LINE L1 -15 6151 5695 * 1477 273 41 20 chr18 10131206 10131697 -75857237 - L1MEc LINE L1 -5604 792 292 560 205 39 0 chr18 10131718 10131845 -75857089 - L1MEc LINE L1 -6165 231 100 2161 100 0 20 chr18 10132174 10132473 -75856461 - AluSg SINE Alu -17 293 1 2383 101 7 0 chr18 10133462 10133769 -75855165 - AluSc SINE Alu 0 309 1 2049 100 0 69 chr18 10133770 10134089 -75854845 - AluY SINE Alu -14 297 1 1180 225 64 31 chr18 10134677 10134996 -75853938 - L1ME1 LINE L1 -7 6159 5830 510 199 14 7 chr18 10135149 10135234 -75853700 + GA-rich Low_complexity Low_complexity 4 92 -53 2412 94 0 0 chr18 10135234 10135543 -75853391 + AluSc SINE Alu 1 309 0 510 199 14 7 chr18 10135543 10135598 -75853336 + GA-rich Low_complexity Low_complexity 92 145 0 2489 76 16 0 chr18 10136956 10137260 -75851674 - AluSc SINE Alu 0 309 1 2057 155 28 6 chr18 10137284 10137639 -75851295 - MLT1A1 LTR MaLR -2 363 1 2412 90 3 0 chr18 10137756 10138057 -75850877 - AluSp SINE Alu -11 302 1 2119 148 73 57 chr18 10138084 10138538 -75850396 + LOR1b LTR ERV1 1 461 0 1678 180 3 18 chr18 10138637 10138920 -75850014 + AluJo SINE Alu 1 279 -33 1152 80 145 0 chr18 10138921 10139100 -75849834 - LTR12 LTR ERV1 -525 189 1 2072 92 67 0 chr18 10139515 10139799 -75849135 - AluSq SINE Alu -10 303 1 7445 55 282 0 chr18 10141070 10142148 -75846786 - SVA Other Other -2 1384 3 429 349 11 31 chr18 10142163 10142424 -75846510 - MIR SINE MIR 0 262 7 526 202 6 22 chr18 10143711 10143889 -75845045 + CT-rich Low_complexity Low_complexity 2 176 0 2272 112 0 10 chr18 10144822 10145136 -75843798 - AluY SINE Alu 0 311 1 211 139 28 0 chr18 10145627 10145663 -75843271 + CT-rich Low_complexity Low_complexity 5 41 0 287 341 60 24 chr18 10145970 10146137 -75842797 + MIR3 SINE MIR 21 193 -15 315 238 0 0 chr18 10146360 10146444 -75842490 - MER69 DNA AcHobo -832 1694 1611 2264 108 0 3 chr18 10146453 10146749 -75842185 - AluSg SINE Alu -15 295 1 1088 192 43 122 chr18 10146759 10146924 -75842010 - L1MD3 LINE L1 0 8040 7864 2109 102 7 10 chr18 10146924 10147219 -75841715 + AluSx SINE Alu 1 294 -18 1088 192 43 122 chr18 10147219 10147585 -75841349 - L1MD3 LINE L1 -176 7864 7567 418 162 20 149 chr18 10147588 10147736 -75841198 - MER69 DNA AcHobo -942 1584 1456 2270 93 35 0 chr18 10147741 10148031 -75840903 + AluSq SINE Alu 5 304 -9 1466 276 74 10 chr18 10148099 10148225 -75840709 - MER69 DNA AcHobo -1820 706 589 1033 239 66 92 chr18 10148225 10148561 -75840373 - MLT1H LTR MaLR 0 549 206 1373 169 74 57 chr18 10148561 10148658 -75840276 + AluJo SINE Alu 1 95 -217 2350 96 0 0 chr18 10148658 10148961 -75839973 + AluSc SINE Alu 1 303 -6 2106 101 0 64 chr18 10148961 10149288 -75839646 + AluSg SINE Alu 1 307 -3 1373 169 74 57 chr18 10149288 10149485 -75839449 + AluJo SINE Alu 94 301 -11 1033 239 66 92 chr18 10149485 10149712 -75839222 - MLT1H LTR MaLR -343 206 1 1466 276 74 10 chr18 10149712 10150201 -75838733 - MER69 DNA AcHobo -1937 589 1 1692 192 0 10 chr18 10151062 10151374 -75837560 - AluJo SINE Alu -3 309 1 2122 98 36 0 chr18 10152071 10152374 -75836560 - AluSq SINE Alu 0 313 1 193 273 0 0 chr18 10152604 10152648 -75836286 + L2 LINE L2 3225 3268 -4 196 281 18 0 chr18 10153254 10153311 -75835623 - MIR SINE MIR -132 130 73 380 241 269 0 chr18 10153363 10153504 -75835430 - MIR SINE MIR -26 236 58 4854 140 36 16 chr18 10153533 10153673 -75835261 - L1MA6 LINE L1 0 6482 6346 2155 109 0 10 chr18 10153673 10153967 -75834967 - AluSg SINE Alu -19 291 1 4854 140 36 16 chr18 10153967 10154682 -75834252 - L1MA6 LINE L1 -136 6346 5610 1360 105 0 0 chr18 10154711 10154883 -75834051 - AluSx SINE Alu -103 209 38 8537 163 28 29 chr18 10154886 10155679 -75833255 - L1MA6 LINE L1 -743 5585 4792 2290 90 0 13 chr18 10155679 10155978 -75832956 + AluSg SINE Alu 1 295 -15 8537 163 28 29 chr18 10155978 10156967 -75831967 - L1MA6 LINE L1 -1536 4792 3852 4679 247 38 36 chr18 10156942 10157812 -75831122 - L1MA6 LINE L1 -4044 2284 1417 * 2288 118 3 3 chr18 10157812 10158125 -75830809 - AluSq SINE Alu 0 313 1 4679 247 38 36 chr18 10158125 10158183 -75830751 - L1MA6 LINE L1 -4911 1417 1361 2280 98 9 29 chr18 10158183 10158498 -75830436 - AluSc SINE Alu 0 309 1 2502 79 0 3 chr18 10158498 10158801 -75830133 - AluY SINE Alu -9 302 1 4679 247 38 36 chr18 10158801 10159608 -75829326 - L1MA6 LINE L1 -4966 1362 557 228 259 89 30 chr18 10159654 10159789 -75829145 - L1M3a LINE L1 -5175 780 638 189 0 0 0 chr18 10161194 10161215 -75827719 + (TA)n Simple_repeat Simple_repeat 2 22 0 2161 112 10 0 chr18 10161215 10161510 -75827424 - AluSx SINE Alu -13 299 2 951 198 50 5 chr18 10161517 10161719 -75827215 - MER20 DNA MER1_type -1 218 8 192 211 105 66 chr18 10161804 10161880 -75827054 - L2 LINE L2 -253 3060 2982 294 188 50 25 chr18 10162195 10162275 -75826659 - MIR SINE MIR -54 208 127 567 174 0 0 chr18 10162322 10162420 -75826514 - AluSc SINE Alu 0 309 212 233 243 0 40 chr18 10162684 10162758 -75826176 - L2 LINE L2 -1 3312 3242 660 261 20 57 chr18 10163092 10163170 -75825764 - MIR SINE MIR -25 237 158 2039 103 33 4 chr18 10163170 10163468 -75825466 - AluSc SINE Alu 0 306 1 660 261 20 57 chr18 10163468 10163633 -75825301 - MIR SINE MIR -104 158 2 330 329 46 19 chr18 10163743 10163948 -75824986 + MIR SINE MIR 16 229 -33 21 0 0 0 chr18 10164515 10164536 -75824398 + AT_rich Low_complexity Low_complexity 1 21 0 24 24 0 24 chr18 10164628 10164654 -75824280 + AT_rich Low_complexity Low_complexity 1 27 -14 1697 160 21 14 chr18 10164654 10164936 -75823998 - AluJb SINE Alu -28 284 1 24 24 0 24 chr18 10164936 10164951 -75823983 + AT_rich Low_complexity Low_complexity 27 41 0 2084 110 7 4 chr18 10165961 10166269 -75822665 - AluSx SINE Alu 0 309 1 383 275 43 97 chr18 10166416 10166674 -75822260 + MIR SINE MIR 14 257 -5 1039 117 111 6 chr18 10167417 10167588 -75821346 - MLT1B LTR MaLR 0 390 202 402 167 10 108 chr18 10167583 10167685 -75821249 - MLT1B LTR MaLR -298 92 1 * 1665 116 12 16 chr18 10167746 10167988 -75820946 + AluSq SINE Alu 41 281 -32 247 45 68 0 chr18 10167990 10168034 -75820900 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 200 200 0 0 chr18 10168034 10168069 -75820865 + GA-rich Low_complexity Low_complexity 2 36 0 190 214 71 71 chr18 10170258 10170314 -75818620 - L2 LINE L2 -8 3264 3209 2331 110 0 0 chr18 10174309 10174608 -75814326 - AluSx SINE Alu -11 301 3 255 261 142 22 chr18 10175449 10175583 -75813351 - MER5B DNA MER1_type 0 178 29 193 364 25 8 chr18 10175749 10175867 -75813067 + MER5A DNA MER1_type 37 156 -33 187 195 312 39 chr18 10176093 10176170 -75812764 + MIR3 SINE MIR 102 199 -9 2444 59 7 10 chr18 10177262 10177568 -75811366 - AluY SINE Alu -6 305 1 1488 123 5 5 chr18 10177750 10177961 -75810973 + AluSg/x SINE Alu 87 297 -15 2807 213 27 24 chr18 10178060 10178657 -75810277 + MER77 LTR ERV1 1 599 -6 2211 128 73 14 chr18 10178898 10179242 -75809692 - THE1B LTR MaLR 0 364 1 2580 14 0 0 chr18 10179555 10179831 -75809103 - AluYa5 SINE Alu -2 309 34 649 289 90 37 chr18 10179920 10180080 -75808854 - L2 LINE L2 -129 3184 3034 2260 97 7 3 chr18 10180080 10180379 -75808555 + AluSp SINE Alu 1 300 -13 649 289 90 37 chr18 10180379 10180651 -75808283 - L2 LINE L2 -279 3034 2728 212 114 29 0 chr18 10180652 10180687 -75808247 - L2 LINE L2 -1057 2257 2222 298 287 121 39 chr18 10182044 10182417 -75806517 + L2 LINE L2 2646 3047 -225 192 306 36 36 chr18 10182561 10182672 -75806262 + L2 LINE L2 3195 3305 -8 2224 84 7 24 chr18 10183152 10183449 -75805485 - AluY SINE Alu -18 293 2 2097 139 5 40 chr18 10183466 10183651 -75805283 + MER46B DNA MER2_type 1 43 -2688 2535 66 0 0 chr18 10183651 10183953 -75804981 + AluY SINE Alu 1 302 -9 2097 139 5 40 chr18 10183953 10184141 -75804793 + MER46B DNA MER2_type 43 236 0 921 230 32 14 chr18 10186622 10186839 -75802095 + MER58A DNA MER1_type 4 224 0 2583 65 0 0 chr18 10186865 10187172 -75801762 - AluY SINE Alu -4 307 1 303 312 127 9 chr18 10187243 10187464 -75801470 - L1MDa LINE L1 -4576 1553 1307 1418 121 0 88 chr18 10187494 10187680 -75801254 - AluSg/x SINE Alu 0 310 150 2401 97 0 0 chr18 10187680 10187990 -75800944 - AluSg SINE Alu 0 310 1 1418 121 0 88 chr18 10187990 10188052 -75800882 - AluSg/x SINE Alu -160 150 84 1145 284 75 49 chr18 10188211 10189101 -75799833 - L1MDa LINE L1 -4954 1165 253 2006 122 54 0 chr18 10189233 10189527 -75799407 + AluSx SINE Alu 1 310 -2 2105 122 3 7 chr18 10189537 10189831 -75799103 + AluSx SINE Alu 1 293 -19 2249 105 0 0 chr18 10190319 10190613 -75798321 - AluSc SINE Alu -15 294 1 214 333 128 26 chr18 10190633 10190789 -75798145 + MIR SINE MIR 20 191 -71 181 294 0 0 chr18 10190887 10190938 -75797996 + L2 LINE L2 3263 3313 0 266 164 18 0 chr18 10191043 10191098 -75797836 + CT-rich Low_complexity Low_complexity 3 58 0 1108 153 0 93 chr18 10191098 10191334 -75797600 - AluJo SINE Alu -13 299 86 2340 84 3 23 chr18 10192793 10193102 -75795832 - AluSx SINE Alu -9 303 1 313 338 43 39 chr18 10193403 10193610 -75795324 + L1 LINE L1 3572 3779 -2367 2025 122 0 59 chr18 10193621 10193941 -75794993 + AluSg1 SINE Alu 1 301 -8 1368 199 64 17 chr18 10194147 10194444 -75794490 + MLT1A1 LTR MaLR 1 311 -54 547 183 0 52 chr18 10195262 10195377 -75793557 - FLAM_C SINE Alu -28 115 7 26 0 0 0 chr18 10195656 10195682 -75793252 + AT_rich Low_complexity Low_complexity 1 26 0 271 242 92 42 chr18 10196280 10196400 -75792534 - MIR SINE MIR -117 145 20 1929 160 0 13 chr18 10197389 10197702 -75791232 - AluJo SINE Alu -3 309 1 2258 113 0 3 chr18 10197714 10198015 -75790919 - AluSg SINE Alu -10 300 1 2061 124 7 10 chr18 10198015 10198314 -75790620 - AluSx SINE Alu -14 298 1 180 0 0 0 chr18 10199115 10199135 -75789799 + (A)n Simple_repeat Simple_repeat 1 20 0 2523 59 0 0 chr18 10199928 10200231 -75788703 + AluY SINE Alu 1 303 -8 633 300 82 18 chr18 10200243 10200583 -75788351 + HAL1b LINE L1 360 721 -627 2149 121 3 3 chr18 10200868 10201165 -75787769 + AluSc SINE Alu 1 297 -12 2181 100 17 0 chr18 10201175 10201464 -75787470 + AluSx SINE Alu 1 294 -18 929 181 60 48 chr18 10202157 10202405 -75786529 - ORSL DNA AcHobo -23 252 2 285 338 80 0 chr18 10202992 10203143 -75785791 + MIR SINE MIR 88 250 -12 288 263 88 34 chr18 10203520 10203746 -75785188 - L2 LINE L2 -10 3303 3104 307 97 16 16 chr18 10204389 10204451 -75784483 + (TA)n Simple_repeat Simple_repeat 1 62 0 2248 170 28 21 chr18 10204503 10204926 -75784008 - MSTB LTR MaLR 0 426 1 210 118 0 0 chr18 10205555 10205589 -75783345 + (CAT)n Simple_repeat Simple_repeat 2 35 0 2549 153 10 53 chr18 10205667 10205920 -75783014 + L1PA16 LINE L1 5688 5911 -255 2017 134 17 0 chr18 10205920 10206210 -75782724 + AluSx SINE Alu 1 295 -17 2549 153 10 53 chr18 10206210 10206447 -75782487 + L1PA16 LINE L1 5911 6157 -9 2219 85 17 0 chr18 10206675 10206970 -75781964 - AluY SINE Alu -11 300 1 2220 84 17 0 chr18 10206970 10207268 -75781666 - AluSx SINE Alu -9 303 1 28 0 0 0 chr18 10207555 10207583 -75781351 + AT_rich Low_complexity Low_complexity 1 28 0 192 125 0 0 chr18 10208071 10208103 -75780831 + (CTCA)n Simple_repeat Simple_repeat 1 32 0 512 233 87 6 chr18 10208155 10208327 -75780607 - LTR50 LTR ERVL -1 794 609 611 239 279 12 chr18 10208374 10208704 -75780230 - LTR50 LTR ERVL -377 418 1 2111 105 58 0 chr18 10209236 10209531 -75779403 - AluSx SINE Alu 0 312 1 1919 92 34 116 chr18 10209535 10209862 -75779072 - AluSx SINE Alu -12 300 1 2231 75 43 0 chr18 10210098 10210379 -75778555 - AluY SINE Alu -18 293 1 240 250 0 16 chr18 10210834 10210898 -75778036 + LTR33A LTR ERVL 450 512 -11 2122 114 0 7 chr18 10212024 10212321 -75776613 - AluSg SINE Alu -15 295 1 180 0 0 0 chr18 10213128 10213148 -75775786 + (TC)n Simple_repeat Simple_repeat 1 20 0 432 235 45 38 chr18 10213241 10213373 -75775561 - MLT1K LTR MaLR -255 333 201 2613 62 0 0 chr18 10214851 10215159 -75773775 + AluY SINE Alu 2 309 -2 2607 129 8 3 chr18 10215429 10215817 -75773117 - MLT1B LTR MaLR 0 390 1 2088 98 20 30 chr18 10217152 10217449 -75771485 + AluY SINE Alu 1 294 -17 244 207 92 23 chr18 10217610 10217697 -75771237 - MLT1L LTR MaLR -384 231 139 2324 150 111 5 chr18 10218056 10218469 -75770465 - MSTB2 LTR MaLR 0 457 1 2405 99 3 0 chr18 10218876 10219180 -75769754 - AluSp SINE Alu -8 305 1 562 224 59 35 chr18 10219297 10219467 -75769467 - MER104 DNA Tc2 0 180 7 181 229 0 0 chr18 10219704 10219739 -75769195 - L2 LINE L2 -25 3247 3213 2317 150 76 2 chr18 10220880 10221287 -75767647 - LTR23 LTR ERV1 0 437 1 2542 145 58 62 chr18 10221379 10221413 -75767521 - MLT2B2 LTR ERVL 0 515 482 546 119 0 0 chr18 10221413 10221497 -75767437 + (TAGA)n Simple_repeat Simple_repeat 3 86 0 2542 145 58 62 chr18 10221497 10221979 -75766955 - MLT2B2 LTR ERVL -33 482 1 525 331 6 0 chr18 10222806 10222975 -75765959 + (CA)n Simple_repeat Simple_repeat 2 171 0 2099 123 0 0 chr18 10224274 10224566 -75764368 + AluSq SINE Alu 1 292 -21 507 263 40 6 chr18 10225505 10225680 -75763254 + MIR SINE MIR 58 238 -24 4651 191 16 25 chr18 10226330 10226573 -75762361 - L1 LINE L1 -1503 4643 4399 2439 80 0 13 chr18 10226573 10226885 -75762049 - AluY SINE Alu -3 308 1 2137 92 3 11 chr18 10226889 10227218 -75761716 - AluY SINE Alu 0 327 1 4651 191 16 25 chr18 10227218 10227971 -75760963 - L1 LINE L1 -1750 4396 3650 * 5345 124 28 16 chr18 10227970 10228819 -75760115 + L1PA16 LINE L1 5294 6152 -14 24 32 0 0 chr18 10228820 10228851 -75760083 + AT_rich Low_complexity Low_complexity 1 31 0 606 192 124 80 chr18 10229033 10229090 -75759844 - L1MB7 LINE L1 0 6682 6629 2385 88 0 0 chr18 10229090 10229385 -75759549 - AluSx SINE Alu -17 295 1 606 192 124 80 chr18 10229385 10229577 -75759357 - L1MB7 LINE L1 -53 6629 6422 * 1838 155 18 54 chr18 10229574 10229783 -75759151 - L1MB7 LINE L1 -685 5997 5782 2460 62 0 0 chr18 10229783 10230073 -75758861 - AluY SINE Alu -21 290 1 1838 155 18 54 chr18 10230073 10230448 -75758486 - L1MB7 LINE L1 -900 5782 5436 9652 239 49 31 chr18 10230456 10231930 -75757004 - L1MB7 LINE L1 -1279 5365 3919 2572 60 0 0 chr18 10231930 10232230 -75756704 - AluY SINE Alu -11 300 1 9652 239 49 31 chr18 10232230 10234196 -75754738 - L1MB7 LINE L1 -2725 3919 1990 2315 168 9 70 chr18 10234196 10234337 -75754597 - L1MB3 LINE L1 -2 6181 6033 2187 174 52 7 chr18 10234337 10234745 -75754189 + MSTB LTR MaLR 1 426 0 2315 168 9 70 chr18 10234745 10235128 -75753806 - L1MB3 LINE L1 -150 6033 5689 9652 239 49 31 chr18 10235128 10235212 -75753722 - L1MB7 LINE L1 -4654 1990 1909 2197 128 7 0 chr18 10235212 10235509 -75753425 - AluSx SINE Alu -13 299 1 9652 239 49 31 chr18 10235509 10236035 -75752899 - L1MB7 LINE L1 -4735 1909 1130 683 175 62 28 chr18 10236181 10236358 -75752576 - L1MB7 LINE L1 -5417 1125 943 1080 137 0 44 chr18 10236358 10236541 -75752393 - AluSg/x SINE Alu -11 301 127 2479 90 0 0 chr18 10236542 10236853 -75752081 - AluY SINE Alu 0 311 1 235 96 58 19 chr18 10236859 10236911 -75752023 - L1MA5A LINE L1 0 6297 6244 274 158 35 0 chr18 10237553 10237610 -75751324 - L1MB3 LINE L1 -652 5639 5581 1774 179 32 29 chr18 10237612 10238020 -75750914 + L1MA7 LINE L1 5883 6291 0 2140 89 18 61 chr18 10238059 10238386 -75750548 + AluSq SINE Alu 1 313 0 1646 118 0 13 chr18 10238412 10238641 -75750293 + AluSx SINE Alu 1 226 -86 344 294 68 9 chr18 10239000 10239221 -75749713 - L1MEc LINE L1 -4751 2074 1841 283 243 61 106 chr18 10239281 10239820 -75749114 - L1MEc LINE L1 -4917 1717 1203 1376 232 32 0 chr18 10240330 10240610 -75748324 + AluJo SINE Alu 1 289 -23 413 241 4 24 chr18 10243125 10243257 -75745677 - L1ME3A LINE L1 -280 5882 5757 2209 97 7 3 chr18 10243262 10243561 -75745373 + AluSg SINE Alu 1 300 -10 243 0 0 0 chr18 10243660 10243687 -75745247 + (TA)n Simple_repeat Simple_repeat 1 27 0 2277 103 3 3 chr18 10243690 10244001 -75744933 - AluY SINE Alu 0 311 1 1830 174 7 0 chr18 10244327 10244620 -75744314 + AluJo SINE Alu 5 299 -13 2198 98 3 7 chr18 10244623 10244939 -75743995 + AluSx SINE Alu 1 315 0 186 366 60 15 chr18 10245049 10245183 -75743751 + MIR SINE MIR 2 141 -121 417 109 0 106 chr18 10245341 10245411 -75743523 - AluSp SINE Alu -115 188 135 2284 97 3 31 chr18 10245411 10245731 -75743203 - AluY SINE Alu 0 311 1 418 117 29 107 chr18 10245740 10245843 -75743091 - L1MA5A LINE L1 -3 6294 6200 * 1959 228 111 4 chr18 10245840 10246309 -75742625 - L1MEc LINE L1 -5983 559 41 186 182 52 91 chr18 10247168 10247245 -75741689 + MIR SINE MIR 92 165 -97 2302 115 0 0 chr18 10247806 10248111 -75740823 - AluSg SINE Alu -5 305 1 452 189 33 192 chr18 10249038 10249340 -75739594 + MLT1J LTR MaLR 105 358 -153 5076 12 0 0 chr18 10251253 10251816 -75737118 - L1PA2 LINE L1 0 6155 5593 1556 198 54 17 chr18 10251832 10252181 -75736753 + MLT1A1 LTR MaLR 1 362 -3 2312 103 0 0 chr18 10252197 10252498 -75736436 + AluSg SINE Alu 1 301 -9 566 180 66 93 chr18 10253166 10253349 -75735585 - L2 LINE L2 -11 3302 3125 275 64 0 85 chr18 10253350 10253397 -75735537 - MLT2B3 LTR ERVL -5 548 506 2622 180 33 52 chr18 10253411 10253955 -75734979 - MLT2B3 LTR ERVL -20 534 1 519 261 94 44 chr18 10254110 10254290 -75734644 - MLT1L LTR MaLR -5 610 422 271 239 30 30 chr18 10254407 10254474 -75734460 - MLT1K LTR MaLR -342 246 180 17015 130 26 6 chr18 10254479 10257141 -75731793 - Tigger2 DNA MER2_type -3 2715 2 1519 169 3 60 chr18 10257511 10257654 -75731280 + AluJo SINE Alu 7 126 -186 2252 83 10 27 chr18 10257654 10257955 -75730979 + AluSp SINE Alu 1 296 -17 1519 169 3 60 chr18 10257955 10258113 -75730821 + AluJo SINE Alu 126 291 -21 2277 79 0 0 chr18 10258342 10258658 -75730276 + AluY SINE Alu 1 316 0 293 319 53 18 chr18 10258858 10259027 -75729907 + MER5B DNA MER1_type 4 178 0 296 214 82 10 chr18 10259115 10259213 -75729721 + MIR3 SINE MIR 104 208 0 2114 140 7 0 chr18 10259276 10259583 -75729351 + AluSx SINE Alu 1 309 -3 536 200 200 0 chr18 10259811 10259976 -75728958 - MIR SINE MIR -31 231 34 434 269 93 6 chr18 10260150 10260332 -75728602 + LTR33 LTR ERVL 2 199 -322 304 305 53 21 chr18 10260387 10260574 -75728360 + LTR33 LTR ERVL 328 520 -1 409 353 0 0 chr18 10260679 10260852 -75728082 + (TG)n Simple_repeat Simple_repeat 2 174 0 286 240 40 0 chr18 10261485 10261560 -75727374 + MLT1K LTR MaLR 506 583 -5 440 250 56 14 chr18 10261566 10261710 -75727224 - MIR SINE MIR -102 160 11 329 359 13 6 chr18 10262896 10263055 -75725879 + MIR SINE MIR 96 255 -7 2136 95 24 17 chr18 10263387 10263681 -75725253 - AluSx SINE Alu -16 296 1 281 262 48 12 chr18 10264374 10264458 -75724476 + Charlie7 DNA MER1_type 5 91 -2521 302 206 75 81 chr18 10264466 10264555 -75724379 + Charlie7 DNA MER1_type 2446 2535 -77 2258 81 7 17 chr18 10264555 10264851 -75724083 - AluY SINE Alu -18 293 1 302 206 75 81 chr18 10264851 10264921 -75724013 + Charlie7 DNA MER1_type 2535 2604 -8 21 0 0 0 chr18 10264995 10265016 -75723918 + AT_rich Low_complexity Low_complexity 1 21 0 805 156 4 14 chr18 10265116 10265404 -75723530 + (TGGA)n Simple_repeat Simple_repeat 1 284 0 480 263 34 39 chr18 10267369 10267506 -75721428 - L1MC5 LINE L1 -30 7931 7794 333 0 0 0 chr18 10267506 10267543 -75721391 + (CA)n Simple_repeat Simple_repeat 1 37 0 480 263 34 39 chr18 10267543 10267584 -75721350 - L1MC5 LINE L1 -167 7794 7754 291 153 51 0 chr18 10268280 10268339 -75720595 + MIR SINE MIR 85 146 -62 261 346 30 15 chr18 10268473 10268606 -75720328 + MIR SINE MIR 14 148 -114 181 208 57 0 chr18 10268615 10268668 -75720266 - L2 LINE L2 -2 3311 3256 759 244 66 50 chr18 10268699 10269150 -75719784 - L2 LINE L2 -122 3191 2714 1450 150 53 150 chr18 10269154 10269465 -75719469 + Charlie1b DNA MER1_type 1 237 -2524 2378 97 0 0 chr18 10269465 10269773 -75719161 - AluY SINE Alu -3 308 1 1450 150 53 150 chr18 10269773 10270033 -75718901 + Charlie1b DNA MER1_type 237 521 -2 1282 249 161 90 chr18 10270109 10270403 -75718531 - L2 LINE L2 -717 2597 2325 2398 65 3 10 chr18 10270403 10270710 -75718224 - AluY SINE Alu -5 306 2 1282 249 161 90 chr18 10270710 10271347 -75717587 - L2 LINE L2 -989 2325 1563 2312 88 27 0 chr18 10271347 10271641 -75717293 - AluSx SINE Alu -2 310 9 1282 249 161 90 chr18 10271641 10271891 -75717043 - L2 LINE L2 -1751 1563 1332 903 216 53 5 chr18 10272969 10273177 -75715757 + MER20 DNA MER1_type 1 218 -1 242 254 227 0 chr18 10273783 10273893 -75715041 + MIR SINE MIR 109 243 -19 191 304 54 0 chr18 10274177 10274269 -75714665 + L2 LINE L2 2577 2673 -641 2591 59 3 0 chr18 10274354 10274659 -75714275 - AluY SINE Alu -5 306 1 2429 93 0 3 chr18 10274721 10275032 -75713902 - AluSq SINE Alu -3 310 1 2283 73 3 14 chr18 10275300 10275625 -75713309 - AluY SINE Alu 0 322 1 198 279 45 27 chr18 10276172 10276283 -75712651 - MIR3 SINE MIR -37 171 59 574 138 0 0 chr18 10277439 10277532 -75711402 + L1PB1 LINE L1 5698 5790 -361 240 156 0 0 chr18 10277522 10277567 -75711367 - L1MC4 LINE L1 -1339 6703 6659 * 293 155 17 0 chr18 10277568 10277626 -75711308 + (CA)n Simple_repeat Simple_repeat 2 60 0 2478 93 8 27 chr18 10277626 10277992 -75710942 + L1PB1 LINE L1 5793 6151 0 227 244 0 0 chr18 10278476 10278521 -75710413 - L2 LINE L2 -18 3254 3210 356 315 29 8 chr18 10278695 10278833 -75710101 - MIR SINE MIR -65 143 35 1306 136 97 0 chr18 10279248 10279454 -75709480 + MER30 DNA MER1_type 5 230 0 2243 72 0 14 chr18 10279492 10279771 -75709163 + AluY SINE Alu 1 275 -36 818 204 86 54 chr18 10280528 10280842 -75708092 - MER5C DNA MER1_type 0 324 1 1365 204 25 46 chr18 10280846 10280980 -75707954 + MER46B DNA MER2_type 2 0 -2731 2374 67 3 10 chr18 10280980 10281279 -75707655 + AluY SINE Alu 1 297 -14 1365 204 25 46 chr18 10281279 10281512 -75707422 + MER46B DNA MER2_type -1 236 0 2534 79 0 0 chr18 10281600 10281903 -75707031 + AluSp SINE Alu 1 303 -10 1576 216 38 35 chr18 10281923 10282293 -75706641 + MLT1A2 LTR MaLR 4 374 0 1750 106 11 0 chr18 10283463 10283727 -75705207 + L1MA1 LINE L1 6029 6295 -7 2027 116 0 0 chr18 10283847 10284131 -75704803 - AluSg SINE Alu -17 293 10 210 341 37 0 chr18 10284166 10284248 -75704686 - L2 LINE L2 0 3313 3229 450 360 6 6 chr18 10284558 10284730 -75704204 - L2 LINE L2 -555 2759 2588 1263 284 63 2 chr18 10284799 10285197 -75703737 + LTR16A LTR ERVL 27 448 -2 187 318 212 15 chr18 10285219 10285351 -75703583 - L2 LINE L2 -829 2485 2328 2232 103 0 3 chr18 10286158 10286469 -75702465 + AluY SINE Alu 1 310 -1 235 103 77 0 chr18 10286485 10286524 -75702410 + MLT1G LTR MaLR 139 180 -410 5846 243 87 34 chr18 10286525 10288066 -75700868 + L1MD3 LINE L1 107 1565 -4650 2115 111 0 0 chr18 10288066 10288372 -75700562 + AluY SINE Alu 1 306 -5 2316 69 0 3 chr18 10288377 10288682 -75700252 + AluY SINE Alu 1 304 -7 5846 243 87 34 chr18 10288682 10289275 -75699659 + L1MD3 LINE L1 1568 2319 -3896 2352 133 3 0 chr18 10289280 10289641 -75699293 - L1PB1 LINE L1 -8 6143 5782 302 250 0 0 chr18 10289646 10289702 -75699232 - L1MC4 LINE L1 -1339 6703 6648 595 121 51 15 chr18 10289703 10289813 -75699121 - L1M3 LINE L1 -361 5790 5691 * 1390 216 64 39 chr18 10289812 10289893 -75699041 + L1MD3 LINE L1 2304 2382 -3833 2262 67 0 13 chr18 10289893 10290191 -75698743 + AluY SINE Alu 1 294 -17 1390 216 64 39 chr18 10290191 10290517 -75698417 + L1MD3 LINE L1 2382 2721 -3494 * 1576 209 65 25 chr18 10290511 10291059 -75697875 + L1MD3 LINE L1 5053 5578 -825 2355 73 0 3 chr18 10291059 10291359 -75697575 + AluY SINE Alu 1 299 -12 1576 209 65 25 chr18 10291359 10291849 -75697085 + L1MD3 LINE L1 5578 6403 0 239 316 26 60 chr18 10292337 10292454 -75696480 + L2 LINE L2 3160 3272 0 345 227 27 0 chr18 10292606 10292681 -75696253 - MIR SINE MIR -8 254 178 1973 137 104 25 chr18 10292694 10293051 -75695883 - MLT1B LTR MaLR -5 385 1 523 298 30 24 chr18 10293054 10293222 -75695712 - MIR SINE MIR -92 170 2 225 306 111 0 chr18 10294022 10294094 -75694840 - L2 LINE L2 -44 3269 3190 2333 44 0 3 chr18 10294708 10295004 -75693930 - AluY SINE Alu -16 295 1 1583 221 11 27 chr18 10295030 10295401 -75693533 + MLT1A1 LTR MaLR 1 365 0 279 197 14 14 chr18 10295820 10295891 -75693043 + CT-rich Low_complexity Low_complexity 3 73 0 343 308 63 5 chr18 10296137 10296358 -75692576 - L1MEc LINE L1 -4751 1559 1326 256 243 61 106 chr18 10296418 10296957 -75691977 - L1MEc LINE L1 -4917 1202 688 1270 232 32 0 chr18 10297467 10297747 -75691187 + AluJo SINE Alu 1 289 -23 371 305 105 36 chr18 10299206 10299426 -75689508 - L1MC/D LINE L1 -637 5484 5255 403 237 10 31 chr18 10300262 10300394 -75688540 - L1ME3A LINE L1 -288 5882 5757 1973 116 3 13 chr18 10300399 10300710 -75688224 + AluSg SINE Alu 1 308 -2 234 366 60 15 chr18 10300825 10300959 -75687975 + MIR SINE MIR 2 141 -121 262 326 8 45 chr18 10301632 10301764 -75687170 - MLT1K LTR MaLR -15 573 447 2311 77 7 0 chr18 10301927 10302224 -75686710 - AluSx SINE Alu -13 299 1 5437 144 76 72 chr18 10302406 10304395 -75684539 + pTR5 LTR ERV1 743 2438 0 502 302 92 47 chr18 10304567 10304773 -75684161 + MLT1I LTR MaLR 12 207 -202 1491 142 0 0 chr18 10304773 10305005 -75683929 - AluSc SINE Alu -11 298 67 502 302 92 47 chr18 10305005 10305179 -75683755 + MLT1I LTR MaLR 207 409 0 573 212 64 39 chr18 10305356 10305559 -75683375 + MLT1J2 LTR MaLR 2 209 -241 201 191 29 29 chr18 10306177 10306245 -75682689 + (TAA)n Simple_repeat Simple_repeat 1 68 0 1821 118 39 4 chr18 10306245 10306524 -75682410 - AluSq SINE Alu -19 294 6 5526 72 104 3 chr18 10306668 10307418 -75681516 - LTR12 LTR ERV1 0 826 1 501 278 75 66 chr18 10308411 10308623 -75680311 - MIR SINE MIR -35 227 14 303 295 92 37 chr18 10309085 10309302 -75679632 + LTR16C LTR ERVL 260 488 -3 438 290 127 45 chr18 10309437 10309751 -75679183 - LTR16A LTR ERVL -7 443 104 2044 82 43 4 chr18 10309943 10310223 -75678711 + AluSg1 SINE Alu 1 291 -18 387 286 30 38 chr18 10310256 10310389 -75678545 - MIR3 SINE MIR -62 146 15 22 35 0 0 chr18 10310471 10310500 -75678434 + AT_rich Low_complexity Low_complexity 1 29 0 222 329 137 14 chr18 10313467 10313613 -75675321 - MIR3 SINE MIR -13 195 32 2191 105 0 7 chr18 10313972 10314278 -75674656 + AluSx SINE Alu 1 304 -8 279 236 62 28 chr18 10314698 10314807 -75674127 - MLT1H1 LTR MaLR 0 555 431 * 293 288 38 0 chr18 10314806 10314886 -75674048 - MLT1H1 LTR MaLR -399 156 74 225 94 0 0 chr18 10314968 10315000 -75673934 + (TC)n Simple_repeat Simple_repeat 1 32 0 889 301 31 31 chr18 10315276 10315631 -75673303 - Charlie8 DNA MER1_type -1886 531 177 388 263 49 99 chr18 10315911 10316106 -75672828 - HERVL LTR ERVL -4102 1552 1370 2247 125 36 31 chr18 10316106 10316465 -75672469 - THE1B LTR MaLR 0 364 4 388 263 49 99 chr18 10316465 10316512 -75672422 - HERVL LTR ERVL -4284 1370 1322 1850 145 7 26 chr18 10316525 10316835 -75672099 + AluSx SINE Alu 1 304 -8 617 309 71 49 chr18 10316873 10317666 -75671268 - HERVL LTR ERVL -4290 1195 394 793 254 48 75 chr18 10318053 10318131 -75670803 - LTR41 LTR ERVL -6 767 688 2181 80 0 30 chr18 10318131 10318431 -75670503 + AluY SINE Alu 1 291 -20 2010 128 0 0 chr18 10318431 10318729 -75670205 + AluY SINE Alu 1 298 -13 793 254 48 75 chr18 10318729 10319348 -75669586 - LTR41 LTR ERVL -83 690 13 244 300 0 0 chr18 10319356 10319416 -75669518 - MER94 DNA DNA -73 61 2 307 283 33 0 chr18 10319798 10319890 -75669044 - Charlie8 DNA MER1_type -2233 184 90 474 228 9 53 chr18 10319926 10320040 -75668894 + MIR SINE MIR 81 189 -73 1907 137 0 32 chr18 10320735 10321048 -75667886 - AluSx SINE Alu -9 303 1 836 302 58 4 chr18 10321912 10322154 -75666780 + MIR SINE MIR 8 262 0 359 343 84 58 chr18 10322422 10322499 -75666435 - L2 LINE L2 -77 3195 3121 354 45 0 0 chr18 10322499 10322543 -75666391 + (CACAG)n Simple_repeat Simple_repeat 3 46 0 359 343 84 58 chr18 10322543 10322824 -75666110 - L2 LINE L2 -151 3121 2828 547 331 81 29 chr18 10322927 10323335 -75665599 - L2 LINE L2 -642 2672 2244 201 326 0 0 chr18 10323337 10323469 -75665465 + (CA)n Simple_repeat Simple_repeat 1 132 0 2165 105 0 3 chr18 10325767 10326071 -75662863 - AluSx SINE Alu -9 303 1 1654 107 0 0 chr18 10326896 10327120 -75661814 + AluSq SINE Alu 27 250 -63 778 266 37 0 chr18 10327386 10327600 -75661334 - LTR16C LTR ERVL -1 490 269 279 291 0 58 chr18 10328135 10328221 -75660713 + L2 LINE L2 3188 3268 -4 1983 203 34 14 chr18 10328247 10328665 -75660269 + MSTB LTR MaLR 1 426 0 219 269 202 10 chr18 10328803 10328888 -75660046 + L2 LINE L2 3149 3259 -13 2062 98 13 35 chr18 10328888 10329203 -75659731 + AluSg SINE Alu 1 308 -2 219 269 202 10 chr18 10329203 10329221 -75659713 + L2 LINE L2 3259 3272 0 917 232 79 0 chr18 10329246 10329487 -75659447 + MIR SINE MIR 3 262 0 2138 175 87 11 chr18 10329555 10330001 -75658933 + LTR12 LTR ERV1 1 480 -234 182 415 0 0 chr18 10330138 10330191 -75658743 + MIR SINE MIR 18 70 -138 549 275 137 23 chr18 10331292 10331598 -75657336 + L1MC5 LINE L1 5982 6120 -1 216 323 0 0 chr18 10332277 10332339 -75656595 - L2 LINE L2 -6 3307 3246 207 0 0 0 chr18 10332420 10332443 -75656491 + (A)n Simple_repeat Simple_repeat 1 23 0 207 0 0 0 chr18 10332632 10332655 -75656279 + (A)n Simple_repeat Simple_repeat 1 23 0 * 1858 272 178 12 chr18 10332647 10332940 -75655994 - L2 LINE L2 -797 2517 2274 2490 187 44 31 chr18 10332940 10333491 -75655443 - MER74A LTR ERVL 0 558 1 1858 272 178 12 chr18 10333491 10334047 -75654887 - L2 LINE L2 -1040 2274 1480 1766 179 82 26 chr18 10334047 10334121 -75654813 + MLT1A1 LTR MaLR 5 73 -292 2177 107 3 13 chr18 10334121 10334430 -75654504 + AluSg SINE Alu 1 306 -4 1766 179 82 26 chr18 10334430 10334696 -75654238 + MLT1A1 LTR MaLR 73 364 -1 1858 272 178 12 chr18 10334696 10334793 -75654141 - L2 LINE L2 -1834 1480 1400 2263 96 3 0 chr18 10337367 10337659 -75651275 + AluSx SINE Alu 1 293 -19 23 0 0 0 chr18 10339015 10339038 -75649896 + AT_rich Low_complexity Low_complexity 1 23 0 964 212 75 81 chr18 10339057 10339364 -75649570 - L1MD2 LINE L1 -17 6736 6432 2148 94 3 27 chr18 10339370 10339669 -75649265 - AluSc SINE Alu -17 292 1 2900 178 9 18 chr18 10339689 10340240 -75648694 - L1MD2 LINE L1 -417 6219 5674 37957 30 1 0 chr18 10340252 10345573 -75643361 + L1PA2 LINE L1 701 6155 0 228 100 0 0 chr18 10345580 10345620 -75643314 + (TTAAA)n Simple_repeat Simple_repeat 3 42 0 5943 253 38 37 chr18 10345627 10345802 -75643132 - L1MD2 LINE L1 -858 5682 5509 2281 99 0 0 chr18 10345802 10346095 -75642839 + AluSg SINE Alu 1 293 -17 5943 253 38 37 chr18 10346095 10346251 -75642683 - L1MD2 LINE L1 -1031 5509 5355 303 28 0 0 chr18 10346251 10346287 -75642647 + (ATG)n Simple_repeat Simple_repeat 3 38 0 5943 253 38 37 chr18 10346287 10346774 -75642160 - L1MD2 LINE L1 -1185 5355 4870 2066 133 0 3 chr18 10346774 10347075 -75641859 - AluSg SINE Alu -10 300 1 5943 253 38 37 chr18 10347075 10347135 -75641799 - L1MD2 LINE L1 -1670 4870 4812 1774 167 0 50 chr18 10347135 10347490 -75641444 - AluSx SINE Alu 0 312 1 5943 253 38 37 chr18 10347490 10348005 -75640929 - L1MD2 LINE L1 -1728 4812 4299 2471 96 0 0 chr18 10348005 10348318 -75640616 - AluSq SINE Alu 0 313 1 5943 253 38 37 chr18 10348318 10348655 -75640279 - L1MD2 LINE L1 -2241 4299 3943 2291 109 0 0 chr18 10348655 10348958 -75639976 - AluSg SINE Alu -7 303 1 5943 253 38 37 chr18 10348958 10349259 -75639675 - L1MD2 LINE L1 -2597 3943 3644 5854 126 44 31 chr18 10349254 10349415 -75639519 - L1MA8 LINE L1 -1 6290 6133 * 6501 32 3 0 chr18 10349415 10350122 -75638812 - L1PA4 LINE L1 -3 6152 5441 2236 55 44 0 chr18 10350122 10350395 -75638539 - AluY SINE Alu -26 285 1 6501 32 3 0 chr18 10350395 10350410 -75638524 - L1PA4 LINE L1 -714 5441 5428 5854 126 44 31 chr18 10350410 10351077 -75637857 - L1MA8 LINE L1 -158 6133 5439 2220 108 0 7 chr18 10351077 10351383 -75637551 - AluSx SINE Alu -8 304 1 5854 126 44 31 chr18 10351383 10351713 -75637221 - L1MA8 LINE L1 -852 5439 5115 1356 210 6 6 chr18 10351716 10352059 -75636875 - L1MD2 LINE L1 -2884 3656 3314 2567 81 0 0 chr18 10352079 10352388 -75636546 + AluSx SINE Alu 1 309 -3 243 0 0 0 chr18 10352528 10352555 -75636379 + (A)n Simple_repeat Simple_repeat 1 27 0 440 313 94 5 chr18 10353224 10353416 -75635518 - MIR SINE MIR -5 257 49 2564 51 0 0 chr18 10353580 10353874 -75635060 - AluY SINE Alu -17 294 1 2211 215 63 45 chr18 10353883 10354292 -75634642 - L1MD2 LINE L1 -3219 3321 2921 2283 108 3 0 chr18 10354292 10354597 -75634337 - AluSg SINE Alu -4 306 1 2211 215 63 45 chr18 10354597 10354618 -75634316 - L1MD2 LINE L1 -3619 2921 2902 2417 68 3 7 chr18 10354618 10354914 -75634020 - AluY SINE Alu -16 295 1 2317 81 7 3 chr18 10354916 10355211 -75633723 - AluSp SINE Alu -17 296 1 2211 215 63 45 chr18 10355211 10355532 -75633402 - L1MD2 LINE L1 -3638 2902 2588 2214 90 6 32 chr18 10355532 10355844 -75633090 - AluSq SINE Alu -9 304 1 2211 215 63 45 chr18 10355844 10356315 -75632619 - L1MD2 LINE L1 -3952 2588 2088 2269 82 3 13 chr18 10356315 10356619 -75632315 - AluY SINE Alu -10 301 1 2211 215 63 45 chr18 10356619 10356699 -75632235 - L1MD2 LINE L1 -4452 2088 2011 377 240 0 0 chr18 10356727 10356802 -75632132 - Tigger5 DNA MER2_type -7 2316 2242 2328 147 52 2 chr18 10356992 10357399 -75631535 - L1MA8 LINE L1 -3 6288 5862 346 320 85 76 chr18 10357401 10357742 -75631192 - L2 LINE L2 -15 3257 2914 283 313 0 0 chr18 10357965 10358045 -75630889 + GA-rich Low_complexity Low_complexity 2 81 0 302 219 29 124 chr18 10358432 10358510 -75630424 + MIR SINE MIR 58 119 -143 1731 176 20 10 chr18 10358510 10358812 -75630122 - AluJo SINE Alu -7 305 1 302 219 29 124 chr18 10358812 10358870 -75630064 + MIR SINE MIR 119 181 -81 219 244 13 77 chr18 10358886 10358964 -75629970 + MIR SINE MIR 109 181 -81 1393 228 37 15 chr18 10359089 10359303 -75629631 - MER58B DNA MER1_type -2082 338 113 1816 76 0 0 chr18 10359303 10359527 -75629407 + AluY SINE Alu 86 309 -2 1393 228 37 15 chr18 10359527 10359637 -75629297 - MER58B DNA MER1_type -2307 113 7 2018 101 0 0 chr18 10360226 10360483 -75628451 + AluSc SINE Alu 41 297 -12 27 29 0 0 chr18 10360522 10360556 -75628378 + AT_rich Low_complexity Low_complexity 1 34 0 942 316 132 50 chr18 10360689 10361700 -75627234 + L2 LINE L2 1884 2976 -338 2355 110 0 0 chr18 10361714 10362024 -75626910 - AluSg SINE Alu 0 310 1 2435 67 0 10 chr18 10362063 10362361 -75626573 - AluY SINE Alu -16 295 1 1948 96 17 48 chr18 10363657 10363979 -75624955 + AluSx SINE Alu 1 313 0 2316 67 0 7 chr18 10364708 10365017 -75623917 + AluY SINE Alu 1 307 0 1936 154 7 3 chr18 10365299 10365598 -75623336 - AluJo SINE Alu -12 300 1 256 250 44 29 chr18 10365721 10365857 -75623077 + L1M4 LINE L1 4104 4241 -1905 331 270 102 51 chr18 10365955 10366170 -75622764 + L1M4 LINE L1 4549 4774 -1372 2308 104 3 3 chr18 10366389 10366696 -75622238 - AluSx SINE Alu -5 307 1 793 136 53 8 chr18 10366742 10366874 -75622060 - L1PB3 LINE L1 0 6154 6017 6035 155 11 60 chr18 10367003 10368737 -75620197 - L1PA14 LINE L1 -84 6077 4336 847 125 16 0 chr18 10368737 10368865 -75620069 + AluSg/x SINE Alu 172 301 -11 6035 155 11 60 chr18 10368865 10369064 -75619870 - L1PA14 LINE L1 -1825 4336 4129 207 244 195 0 chr18 10369066 10369148 -75619786 + L2 LINE L2 3171 3268 -4 2260 43 4 11 chr18 10370044 10370345 -75618589 - AluY SINE Alu 0 304 6 240 143 0 0 chr18 10370441 10370483 -75618451 + (TG)n Simple_repeat Simple_repeat 2 43 0 195 340 60 13 chr18 10371654 10371804 -75617130 - MIR SINE MIR -70 192 36 203 348 14 0 chr18 10372541 10372610 -75616324 - L2 LINE L2 -9 3263 3194 216 251 58 145 chr18 10372755 10372962 -75615972 - L2 LINE L2 -213 3059 2871 357 299 3 139 chr18 10372969 10373257 -75615677 + L2 LINE L2 3003 3251 -21 1839 162 18 0 chr18 10373801 10374085 -75614849 + AluJo SINE Alu 1 289 -23 316 330 74 34 chr18 10374122 10374298 -75614636 + MIR3 SINE MIR 7 189 -19 364 288 61 25 chr18 10374903 10375066 -75613868 + MER104 DNA Tc2 1 169 -11 285 308 88 42 chr18 10375577 10375837 -75613097 + L2 LINE L2 1693 1964 -1350 1104 243 60 7 chr18 10376141 10376441 -75612493 - L1MD3 LINE L1 -14 7981 7666 359 169 0 0 chr18 10376441 10376500 -75612434 - MER20B DNA MER1_type -39 744 686 496 229 245 21 chr18 10376662 10376854 -75612080 + MIR SINE MIR 3 237 -25 551 221 150 7 chr18 10376903 10376999 -75611935 - MER58C DNA MER1_type -2205 215 91 270 0 0 0 chr18 10376999 10377029 -75611905 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 551 221 150 7 chr18 10377029 10377072 -75611862 - MER58C DNA MER1_type -2329 91 56 373 309 8 0 chr18 10377355 10377478 -75611456 + MLT1J2 LTR MaLR 22 145 -305 366 259 136 41 chr18 10377562 10377709 -75611225 + MLT1J2 LTR MaLR 276 436 -14 2367 45 45 0 chr18 10377909 10378198 -75610736 - AluY SINE Alu -9 302 1 2323 94 0 0 chr18 10378287 10378574 -75610360 - AluSx SINE Alu -24 288 2 23 33 0 0 chr18 10378577 10378607 -75610327 + AT_rich Low_complexity Low_complexity 1 30 0 256 24 0 49 chr18 10378650 10378691 -75610243 + AluY SINE Alu 6 44 -258 2107 139 0 7 chr18 10378799 10379108 -75609826 - AluSx SINE Alu -3 309 3 988 189 5 21 chr18 10379151 10379341 -75609593 - AluJo SINE Alu -23 289 103 222 250 73 0 chr18 10379422 10379449 -75609485 - MIR SINE MIR -116 92 68 198 0 0 0 chr18 10379449 10379471 -75609463 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 222 250 73 0 chr18 10379471 10379511 -75609423 - MIR SINE MIR -140 68 20 191 235 244 50 chr18 10379768 10379887 -75609047 - MIR SINE MIR -98 164 23 2441 57 3 3 chr18 10381126 10381427 -75607507 + AluY SINE Alu 1 301 -10 1383 147 0 14 chr18 10381626 10381844 -75607090 - AluJb SINE Alu -95 217 3 246 287 17 35 chr18 10381849 10381865 -75607069 - L1MA10 LINE L1 0 6334 6319 405 277 45 23 chr18 10381865 10382042 -75606892 - L1ME1 LINE L1 -4 6162 5982 291 28 0 0 chr18 10382114 10382150 -75606784 + (TTTTG)n Simple_repeat Simple_repeat 1 36 0 204 301 274 33 chr18 10382522 10382675 -75606259 + MIR3 SINE MIR 15 204 -4 805 152 15 30 chr18 10383909 10384041 -75604893 - FLAM_C SINE Alu -3 130 1 249 136 64 18 chr18 10384128 10384238 -75604696 + (TA)n Simple_repeat Simple_repeat 2 116 0 263 308 13 0 chr18 10385279 10385357 -75603577 + L2 LINE L2 3233 3311 -2 433 338 30 5 chr18 10385378 10385576 -75603358 - MIR SINE MIR -45 217 15 3507 20 0 0 chr18 10386980 10387381 -75601553 + L1PA2 LINE L1 5755 6155 0 1317 95 0 0 chr18 10387825 10387993 -75600941 - AluSg/x SINE Alu -11 301 134 2427 73 7 10 chr18 10387993 10388296 -75600638 - AluSg1 SINE Alu -7 302 1 777 231 96 0 chr18 10388756 10388955 -75599979 - MER20 DNA MER1_type -1 218 1 1531 140 36 91 chr18 10389154 10389540 -75599394 - MLT1A1 LTR MaLR 0 365 1 655 219 111 65 chr18 10390912 10391347 -75597587 - LTR45B LTR ERV1 -26 499 1 2053 94 36 0 chr18 10392272 10392548 -75596386 + AluSx SINE Alu 1 286 -26 240 35 0 0 chr18 10392551 10392580 -75596354 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 305 248 138 48 chr18 10392919 10393064 -75595870 + MLT1I LTR MaLR 234 391 -18 487 247 82 35 chr18 10395060 10395230 -75593704 + MER5B DNA MER1_type 1 178 0 805 203 37 32 chr18 10395238 10395425 -75593509 - MER20 DNA MER1_type 0 219 32 954 171 36 77 chr18 10395918 10396140 -75592794 - MER20 DNA MER1_type -6 213 1 210 176 0 0 chr18 10397623 10397674 -75591260 + (TG)n Simple_repeat Simple_repeat 1 51 0 394 282 60 57 chr18 10397697 10397914 -75591020 - MIR SINE MIR -42 220 1 291 276 205 31 chr18 10399475 10399856 -75589078 - L1ME4a LINE L1 -23 6098 5652 225 269 0 0 chr18 10399882 10399934 -75589000 - L1ME4a LINE L1 -2151 5657 5606 1926 212 61 35 chr18 10400196 10400739 -75588195 - MER74B LTR ERVL -4 618 62 949 166 116 30 chr18 10403719 10403918 -75585016 + AluJb SINE Alu 11 226 -86 706 152 0 32 chr18 10403918 10404043 -75584891 + AluJb SINE Alu 165 285 -27 329 250 172 0 chr18 10405319 10405447 -75583487 + MIR SINE MIR 84 233 -29 309 286 0 11 chr18 10405474 10405565 -75583369 - MIR SINE MIR -125 137 48 219 36 0 0 chr18 10405785 10405813 -75583121 + (GTTTG)n Simple_repeat Simple_repeat 1 28 0 238 282 97 0 chr18 10406625 10406728 -75582206 - L2 LINE L2 -1 3312 3200 576 118 118 92 chr18 10406791 10406836 -75582098 - Charlie5 DNA MER1_type -4 2581 2539 2555 71 0 0 chr18 10406836 10407145 -75581789 - AluY SINE Alu -2 309 1 576 118 118 92 chr18 10407145 10407251 -75581683 - Charlie5 DNA MER1_type -46 2539 2426 1741 148 38 41 chr18 10407315 10407632 -75581302 - MER1B DNA MER1_type 0 339 24 188 243 57 29 chr18 10407637 10407707 -75581227 + L2 LINE L2 3006 3077 -195 304 250 45 56 chr18 10408797 10408941 -75579993 - L1MEd LINE L1 -4909 1463 1265 1580 146 106 56 chr18 10409231 10409608 -75579326 + MSTD LTR MaLR 1 396 0 331 257 50 89 chr18 10410462 10410641 -75578293 + MER104 DNA Tc2 6 177 -3 1845 80 13 0 chr18 10410923 10411160 -75577774 - AluSx SINE Alu -10 302 63 1464 197 51 7 chr18 10411462 10411756 -75577178 + AluJb SINE Alu 1 307 -5 2324 101 0 3 chr18 10413004 10413301 -75575633 + AluSx SINE Alu 1 296 -16 342 226 6 0 chr18 10414102 10414188 -75574746 + L1MC4a LINE L1 5525 5613 -508 360 170 0 0 chr18 10414220 10414326 -75574608 + (CA)n Simple_repeat Simple_repeat 1 106 0 981 181 76 138 chr18 10414327 10414472 -75574462 + MLT1B LTR MaLR 32 184 -206 1718 174 0 7 chr18 10414472 10414759 -75574175 + AluJo SINE Alu 14 298 -14 981 181 76 138 chr18 10414759 10414983 -75573951 + MLT1B LTR MaLR 184 378 -12 2250 102 3 0 chr18 10415027 10415322 -75573612 + AluSg SINE Alu 1 296 -14 280 289 29 24 chr18 10415385 10415593 -75573341 + L1MC4a LINE L1 5717 5825 -337 866 279 229 16 chr18 10415782 10416524 -75572410 + L2 LINE L2 1802 2701 -613 788 282 124 30 chr18 10416859 10417433 -75571501 - L1ME3A LINE L1 -286 5884 5257 272 248 64 40 chr18 10417457 10417582 -75571352 - L1ME3A LINE L1 -939 5207 5080 299 311 157 34 chr18 10417600 10418147 -75570787 + L2 LINE L2 2704 3313 0 537 277 43 29 chr18 10418358 10418766 -75570168 + L2 LINE L2 2652 3108 -205 2086 131 0 3 chr18 10418788 10419085 -75569849 - AluSx SINE Alu -16 296 1 337 254 99 109 chr18 10419152 10419455 -75569479 + HAL1b LINE L1 280 579 -769 301 282 158 30 chr18 10419598 10419800 -75569134 - MIR SINE MIR -12 250 23 196 392 82 0 chr18 10420309 10420467 -75568467 + MIR SINE MIR 91 261 -1 2015 127 3 0 chr18 10420560 10420843 -75568091 - AluSx SINE Alu -4 308 25 660 240 34 53 chr18 10422448 10422494 -75566440 - MER3 DNA MER1_type -5 204 159 2203 125 0 0 chr18 10422494 10422806 -75566128 - AluSx SINE Alu 0 312 1 660 240 34 53 chr18 10422806 10422967 -75565967 - MER3 DNA MER1_type -50 159 1 22 0 0 0 chr18 10423890 10423912 -75565022 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr18 10424597 10424624 -75564310 + AT_rich Low_complexity Low_complexity 1 27 0 292 283 164 17 chr18 10424635 10424812 -75564122 - MIR SINE MIR -13 249 47 1762 150 15 4 chr18 10426265 10426538 -75562396 - MLT2B1 LTR ERVL -244 276 1 241 224 15 45 chr18 10427034 10427101 -75561833 + L3 LINE CR1 619 683 -894 402 260 76 139 chr18 10427131 10427233 -75561701 + LTR67 LTR ERVL 34 141 -416 2013 108 43 0 chr18 10427233 10427511 -75561423 + AluSc SINE Alu 1 290 -19 402 260 76 139 chr18 10427511 10427962 -75560972 + LTR67 LTR ERVL 141 552 -5 214 248 144 8 chr18 10427965 10428090 -75560844 + L3 LINE CR1 679 820 -757 211 245 20 0 chr18 10429426 10429475 -75559459 + GA-rich Low_complexity Low_complexity 2 51 0 999 144 0 0 chr18 10429596 10429742 -75559192 + AluSg/x SINE Alu 122 267 -43 728 279 26 52 chr18 10430462 10430806 -75558128 + MLT1I LTR MaLR 73 407 -2 1053 147 0 21 chr18 10430892 10431083 -75557851 + L1 LINE L1 4159 4345 -1801 1562 138 34 104 chr18 10431094 10431450 -75557484 + L1 LINE L1 4567 4897 -1249 1167 138 6 0 chr18 10431451 10431618 -75557316 + AluJb SINE Alu 132 299 -13 1482 292 96 21 chr18 10431948 10432958 -75555976 - L2 LINE L2 0 3313 2224 1917 195 9 0 chr18 10432967 10433295 -75555639 + MLT1A1 LTR MaLR 23 353 -12 1488 281 128 15 chr18 10433314 10433918 -75555016 - L2 LINE L2 -1098 2216 1545 387 269 46 15 chr18 10434403 10434533 -75554401 + MIR SINE MIR 121 254 -8 25 0 0 0 chr18 10434736 10434761 -75554173 + AT_rich Low_complexity Low_complexity 1 25 0 311 286 159 16 chr18 10434809 10434998 -75553936 + MLT1L LTR MaLR 368 583 -32 1500 194 168 3 chr18 10435005 10435345 -75553589 - MSTD LTR MaLR 0 396 1 5658 159 9 40 chr18 10435580 10436274 -75552660 - L1PA16 LINE L1 -8 6158 5540 2052 136 0 0 chr18 10436274 10436561 -75552373 - AluSx SINE Alu -25 287 1 5658 159 9 40 chr18 10436561 10437273 -75551661 - L1PA16 LINE L1 -626 5540 4807 1845 168 13 0 chr18 10437282 10437580 -75551354 - AluJb SINE Alu -10 302 1 248 359 43 11 chr18 10437919 10438011 -75550923 - L2 LINE L2 -44 3228 3134 203 258 172 55 chr18 10438504 10438632 -75550302 + MIR SINE MIR 82 224 -38 226 242 55 22 chr18 10438715 10438806 -75550128 - L1MC4a LINE L1 -1636 6172 6079 260 255 0 0 chr18 10438848 10438899 -75550035 + (TGGA)n Simple_repeat Simple_repeat 4 54 0 1015 137 0 11 chr18 10438978 10439001 -75549933 + (GGA)n Simple_repeat Simple_repeat 1 202 0 1015 137 0 11 chr18 10439001 10439183 -75549751 + (GGA)n Simple_repeat Simple_repeat 1 180 0 2287 78 0 3 chr18 10439862 10440202 -75548732 + AluY SINE Alu 1 339 0 827 154 0 8 chr18 10440961 10441084 -75547850 + FLAM_A SINE Alu 4 125 -8 21 0 0 0 chr18 10441262 10441283 -75547651 + AT_rich Low_complexity Low_complexity 1 21 0 244 316 25 95 chr18 10441406 10441564 -75547370 - L3b LINE CR1 -114 1469 1323 2213 112 0 0 chr18 10442146 10442451 -75546483 - AluSx SINE Alu -7 305 1 204 241 17 0 chr18 10442703 10442761 -75546173 + MIR SINE MIR 81 139 -69 2213 106 3 3 chr18 10443146 10443457 -75545477 + AluSx SINE Alu 1 311 -1 848 225 0 38 chr18 10443532 10443768 -75545166 + AluJo SINE Alu 3 229 -83 977 225 166 47 chr18 10443883 10444292 -75544642 - MLT1F LTR MaLR 0 542 85 1441 210 30 42 chr18 10444529 10444694 -75544240 - MER58B DNA MER1_type -2079 341 181 2074 110 0 13 chr18 10444694 10444995 -75543939 + AluSg SINE Alu 1 297 -13 1441 210 30 42 chr18 10444995 10445163 -75543771 - MER58B DNA MER1_type -2239 181 12 24 0 0 0 chr18 10445502 10445526 -75543408 + AT_rich Low_complexity Low_complexity 1 24 0 1803 130 59 62 chr18 10445542 10445881 -75543053 + MER44D DNA MER2_type 2 609 0 4108 161 122 5 chr18 10446318 10447058 -75541876 - LTR1B LTR ERV1 0 826 1 207 0 0 0 chr18 10448768 10448791 -75540143 + (TC)n Simple_repeat Simple_repeat 2 24 0 494 311 78 54 chr18 10449361 10449695 -75539239 - LTR16C LTR ERVL -62 429 88 443 329 7 0 chr18 10450147 10450287 -75538647 - HERVL LTR ERVL -849 4805 4665 1972 244 86 25 chr18 10450613 10451048 -75537886 + L2 LINE L2 2326 2733 -580 2441 220 57 30 chr18 10451048 10451625 -75537309 + MLT1E LTR MaLR 1 593 0 1972 244 86 25 chr18 10451625 10452070 -75536864 + L2 LINE L2 2733 3259 -54 1106 316 108 17 chr18 10452068 10452644 -75536290 - L2 LINE L2 -2099 1215 588 * 208 347 42 11 chr18 10452651 10452746 -75536188 - L2 LINE L2 -2867 447 350 1113 222 0 26 chr18 10452747 10452894 -75536040 + MER58A DNA MER1_type 1 141 -2279 3962 128 43 29 chr18 10452894 10453520 -75535414 + MER41B LTR ERV1 1 635 0 1113 222 0 26 chr18 10453520 10453602 -75535332 + MER58A DNA MER1_type 141 224 0 472 316 71 24 chr18 10453603 10453856 -75535078 - L2 LINE L2 -2959 355 91 224 340 43 11 chr18 10455468 10455562 -75533372 - L2 LINE L2 -350 2963 2867 1741 243 58 36 chr18 10455685 10456240 -75532694 - MLT1E LTR MaLR 0 593 27 220 217 29 14 chr18 10456257 10456326 -75532608 - L2 LINE L2 -1261 2053 1984 2269 237 30 11 chr18 10456343 10456849 -75532085 - MER90 LTR ERV1 0 575 55 3632 111 14 19 chr18 10456849 10457365 -75531569 + LTR10D LTR ERV1 1 513 0 2269 237 30 11 chr18 10457365 10457419 -75531515 - MER90 LTR ERV1 -520 55 4 214 67 33 0 chr18 10457470 10457500 -75531434 + MIR SINE MIR 12 42 -220 298 272 53 18 chr18 10457504 10457618 -75531316 + MIR SINE MIR 143 260 -2 285 241 0 0 chr18 10457835 10457893 -75531041 + MER5A DNA MER1_type 57 114 -75 526 201 58 29 chr18 10457919 10457941 -75530993 - L1MA10 LINE L1 0 6334 6313 255 250 94 44 chr18 10457941 10458101 -75530833 - L1ME2 LINE L1 -10 6154 5987 288 301 97 0 chr18 10458795 10458898 -75530036 + L2 LINE L2 3160 3272 0 885 199 28 0 chr18 10458961 10459142 -75529792 - MER20 DNA MER1_type 0 219 34 2125 111 10 17 chr18 10459219 10459516 -75529418 - AluSg1 SINE Alu -14 295 1 23 33 0 0 chr18 10461696 10461726 -75527208 + AT_rich Low_complexity Low_complexity 1 30 0 241 208 13 13 chr18 10462249 10462326 -75526608 + (TTAA)n Simple_repeat Simple_repeat 2 78 0 207 229 200 0 chr18 10463050 10463120 -75525814 - MIR3 SINE MIR -25 183 100 1810 281 70 36 chr18 10463141 10463814 -75525120 + L1M4b LINE L1 90 785 -6074 239 83 0 28 chr18 10463876 10463912 -75525022 + L1M4b LINE L1 1016 1050 -5809 2710 32 0 3 chr18 10463912 10464259 -75524675 + AluY SINE Alu 1 346 0 296 232 0 0 chr18 10464259 10464315 -75524619 + L1M4b LINE L1 1035 1090 -5769 227 211 77 0 chr18 10464318 10464370 -75524564 + L1M4b LINE L1 1125 1180 -5679 2557 52 7 0 chr18 10464429 10464737 -75524197 + AluY SINE Alu 2 311 0 1940 132 0 35 chr18 10464762 10465081 -75523853 + AluSx SINE Alu 1 308 -4 967 142 0 156 chr18 10467624 10467819 -75521115 + L1MB2 LINE L1 5940 6164 -7 2426 66 0 0 chr18 10467819 10468105 -75520829 - AluY SINE Alu -25 286 1 967 142 0 156 chr18 10468105 10468128 -75520806 + L1MB2 LINE L1 6164 6110 -61 1978 138 21 3 chr18 10468128 10468419 -75520515 + AluSx SINE Alu 1 296 -16 967 142 0 156 chr18 10468419 10468474 -75520460 + L1MB2 LINE L1 6109 6171 0 2194 113 0 10 chr18 10468869 10469169 -75519765 - AluSx SINE Alu -15 297 1 453 213 0 0 chr18 10469186 10469266 -75519668 - L2 LINE L2 0 3313 3234 192 347 8 66 chr18 10471686 10471807 -75517127 + L2 LINE L2 2743 2856 -458 369 266 18 9 chr18 10472677 10472786 -75516148 + HAL1b LINE L1 86 195 -1153 181 356 0 0 chr18 10473161 10473220 -75515714 + L2 LINE L2 3203 3261 -11 21 36 0 0 chr18 10473585 10473613 -75515321 + AT_rich Low_complexity Low_complexity 1 28 0 1114 228 54 24 chr18 10473620 10474128 -75514806 - MLT1E2 LTR MaLR 0 624 1 678 286 74 3 chr18 10474434 10474717 -75514217 + L1ME LINE L1 5504 5806 -315 285 282 0 18 chr18 10475606 10475716 -75513218 - L1M4 LINE L1 -2775 3371 3264 399 130 0 0 chr18 10475716 10475793 -75513141 + (TC)n Simple_repeat Simple_repeat 1 77 0 2517 189 19 93 chr18 10475810 10476230 -75512704 - L1M4 LINE L1 -2890 3256 2806 1889 170 3 0 chr18 10476230 10476519 -75512415 + AluJo SINE Alu 1 290 -22 2517 189 19 93 chr18 10476519 10476757 -75512177 - L1M4 LINE L1 -3340 2806 2662 2156 114 7 7 chr18 10476757 10477064 -75511870 - AluSc SINE Alu -2 307 1 2517 189 19 93 chr18 10477064 10477186 -75511748 - L1M4 LINE L1 -3484 2662 2533 1503 219 12 21 chr18 10477201 10477524 -75511410 - MER74A LTR ERVL -95 463 144 1975 160 33 80 chr18 10477524 10478094 -75510840 - MLT2A2 LTR ERVL 0 554 1 8332 86 13 6 chr18 10478094 10479185 -75509749 - HERVL-A2 LTR ERVL 0 5654 4556 589 167 0 0 chr18 10479185 10479275 -75509659 - MER74A LTR ERVL -410 148 59 1840 124 94 63 chr18 10479277 10479490 -75509444 - THE1C LTR MaLR -2 373 143 2370 105 0 3 chr18 10479490 10479803 -75509131 + AluSq SINE Alu 1 312 -1 1840 124 94 63 chr18 10479803 10479951 -75508983 - THE1C LTR MaLR -232 143 1 4143 127 73 3 chr18 10479951 10480596 -75508338 - THE1C-int LTR MaLR 0 1580 891 321 202 106 11 chr18 10480596 10480690 -75508244 - MER74B LTR ERVL -503 119 17 2145 118 0 10 chr18 10481571 10481906 -75507028 + AluSx SINE Alu 1 312 0 1732 147 45 11 chr18 10482308 10482594 -75506340 - AluSx SINE Alu -16 296 1 2480 74 0 3 chr18 10483202 10483511 -75505423 + AluY SINE Alu 3 310 -1 2518 45 0 0 chr18 10484081 10484369 -75504565 - AluY SINE Alu -15 296 9 332 264 102 54 chr18 10486314 10486481 -75502453 - MIR SINE MIR -25 237 63 198 0 0 0 chr18 10486954 10486976 -75501958 + (T)n Simple_repeat Simple_repeat 1 22 0 1460 244 92 30 chr18 10487135 10487603 -75501331 - MLT1D LTR MaLR 0 505 9 505 256 79 33 chr18 10487687 10487902 -75501032 + MLT1K LTR MaLR 348 572 -16 815 329 137 36 chr18 10488548 10489301 -75499633 + L3 LINE CR1 436 1264 -313 210 348 27 27 chr18 10489293 10489405 -75499529 - MER5B DNA MER1_type -42 136 25 * 182 234 106 0 chr18 10489433 10489480 -75499454 + L3 LINE CR1 1524 1575 -2 21 0 0 0 chr18 10489586 10489607 -75499327 + AT_rich Low_complexity Low_complexity 1 21 0 269 122 54 0 chr18 10489703 10489777 -75499157 + (TA)n Simple_repeat Simple_repeat 2 79 0 266 286 89 54 chr18 10489872 10490040 -75498894 - MER5A DNA MER1_type -3 175 2 2200 97 3 3 chr18 10491189 10491488 -75497446 + AluSg SINE Alu 1 299 -11 2871 208 11 4 chr18 10491860 10492409 -75496525 - MER89 LTR ERV1 0 559 7 1244 275 96 40 chr18 10492630 10493248 -75495686 - HAL1 LINE L1 -107 2400 1749 1562 166 28 31 chr18 10493250 10493540 -75495394 - AluJb SINE Alu -23 289 1 4193 94 17 17 chr18 10493637 10493980 -75494954 - L1PA11 LINE L1 -2 6172 5827 2231 104 3 7 chr18 10493980 10494287 -75494647 - AluSg SINE Alu -4 306 1 4193 94 17 17 chr18 10494287 10494525 -75494409 - L1PA11 LINE L1 -346 5828 5591 7735 45 5 0 chr18 10494566 10496147 -75492787 - L1PA5 LINE L1 0 6154 4567 8778 40 1 2 chr18 10496147 10497202 -75491732 + L1P LINE L1 1692 2745 -3401 1177 290 88 44 chr18 10497189 10497800 -75491134 - HAL1 LINE L1 -1869 638 1 * 327 254 85 85 chr18 10497920 10498085 -75490849 - MIR SINE MIR -48 214 50 2123 103 7 33 chr18 10499064 10499366 -75489568 - AluSc SINE Alu -15 294 1 219 317 165 24 chr18 10499578 10499742 -75489192 - L2 LINE L2 -178 3135 2949 478 290 61 61 chr18 10499899 10500258 -75488676 + MLT1J LTR MaLR 95 453 -58 649 262 129 0 chr18 10500274 10500476 -75488458 - MIR SINE MIR -31 231 4 390 251 116 119 chr18 10500677 10500928 -75488006 + MIR SINE MIR 3 252 -10 184 198 48 127 chr18 10502519 10502645 -75486289 - MIR SINE MIR -29 233 118 619 213 43 92 chr18 10502901 10502947 -75485987 - MIR SINE MIR 0 262 215 1837 164 3 10 chr18 10502947 10503240 -75485694 - AluJb SINE Alu -21 291 1 619 213 43 92 chr18 10503240 10503400 -75485534 - MIR SINE MIR -47 215 66 211 143 18 18 chr18 10504244 10504300 -75484634 + CT-rich Low_complexity Low_complexity 4 59 0 2772 252 45 25 chr18 10504787 10505669 -75483265 + Zaphod DNA AcHobo 61 960 -3071 1392 234 34 14 chr18 10505676 10505971 -75482963 - AluJo SINE Alu -1 301 1 654 227 8 0 chr18 10505993 10506121 -75482813 + MER3 DNA MER1_type 1 129 -80 1270 168 195 24 chr18 10506176 10506545 -75482389 + Zaphod DNA AcHobo 3600 4031 0 723 263 0 54 chr18 10507103 10507308 -75481626 + LTR16C LTR ERVL 298 491 0 342 265 0 0 chr18 10507308 10507376 -75481558 + L2 LINE L2 3204 3271 -1 30 27 0 0 chr18 10508222 10508259 -75480675 + AT_rich Low_complexity Low_complexity 1 37 0 375 274 194 77 chr18 10508965 10509585 -75479349 - L1M2 LINE L1 -5734 1115 424 24 85 0 0 chr18 10509622 10509681 -75479253 + GC_rich Low_complexity Low_complexity 1 59 0 26 50 0 0 chr18 10509782 10509822 -75479112 + GC_rich Low_complexity Low_complexity 1 40 0 324 328 127 62 chr18 10509845 10510446 -75478488 - L1M2 LINE L1 -5646 1203 564 1183 125 0 23 chr18 10511831 10512007 -75476927 + AluJo SINE Alu 120 291 -21 222 376 26 8 chr18 10512264 10512381 -75476553 + L2 LINE L2 3150 3268 -4 2347 84 0 10 chr18 10512814 10513110 -75475824 - AluSc SINE Alu -14 295 3 1101 204 3 15 chr18 10513498 10513778 -75475156 + L1MD3 LINE L1 7637 7986 -9 2146 102 0 3 chr18 10515441 10515763 -75473171 - AluSq SINE Alu 0 321 1 735 237 87 0 chr18 10515770 10515943 -75472991 + MER5A DNA MER1_type 2 189 0 26 64 0 0 chr18 10516323 10516370 -75472564 + AT_rich Low_complexity Low_complexity 1 47 0 2474 57 0 3 chr18 10516622 10516920 -75472014 + AluY SINE Alu 1 297 -14 1354 182 60 56 chr18 10518341 10518643 -75470291 - AluJb SINE Alu -9 303 1 285 157 20 0 chr18 10518841 10518892 -75470042 + L2 LINE L2 3261 3312 -1 185 359 0 0 chr18 10519928 10519992 -75468942 + MIR SINE MIR 48 111 -97 324 48 0 0 chr18 10520007 10520049 -75468885 + (ATG)n Simple_repeat Simple_repeat 2 43 0 1656 135 7 44 chr18 10520049 10520205 -75468729 - AluJo SINE Alu -27 285 144 2602 57 0 0 chr18 10520205 10520506 -75468428 - AluY SINE Alu -10 301 1 1656 135 7 44 chr18 10520506 10520645 -75468289 - AluJo SINE Alu -168 144 1 253 226 0 0 chr18 10520814 10520867 -75468067 - MER116 DNA Mariner -27 53 1 370 167 48 12 chr18 10521088 10521172 -75467762 + MER5A DNA MER1_type 23 109 -80 1528 169 26 40 chr18 10523528 10523830 -75465104 - AluJo SINE Alu -13 299 2 1219 253 115 55 chr18 10523970 10524465 -75464469 - MLT1H LTR MaLR 0 549 25 204 314 121 8 chr18 10524539 10524663 -75464271 + MIR3 SINE MIR 3 140 -68 276 308 11 22 chr18 10526246 10526337 -75462597 + MIR SINE MIR 19 108 -100 202 310 103 0 chr18 10526728 10526815 -75462119 - L2 LINE L2 -22 3250 3155 208 255 0 20 chr18 10527479 10527530 -75461404 + CT-rich Low_complexity Low_complexity 3 52 0 440 242 177 43 chr18 10527817 10528003 -75460931 - MIR SINE MIR 0 262 52 5607 232 123 34 chr18 10528562 10530748 -75458186 - Charlie2a DNA MER1_type -36 2826 432 1506 191 8 0 chr18 10530748 10531005 -75457929 - AluJb SINE Alu -39 273 15 5607 232 123 34 chr18 10531005 10531074 -75457860 - Charlie2a DNA MER1_type -2430 432 371 644 274 119 52 chr18 10532349 10532795 -75456139 + L1ME4a LINE L1 5643 6118 -3 379 336 0 9 chr18 10535725 10535841 -75453093 - MIR3 SINE MIR -52 156 42 2031 113 47 13 chr18 10536084 10536384 -75452550 + AluSx SINE Alu 3 312 0 267 152 0 0 chr18 10537753 10537799 -75451135 - L1ME LINE L1 -539 5582 5537 420 218 0 0 chr18 10537913 10537991 -75450943 + Tigger7 DNA MER2_type 3 80 -625 * 1434 176 38 8 chr18 10537988 10538255 -75450679 - Tigger7 DNA MER2_type -204 346 72 * 2061 133 45 6 chr18 10538250 10538582 -75450352 + Tigger7 DNA MER2_type 2243 2587 0 1736 161 30 3 chr18 10538717 10539015 -75449919 - AluSx SINE Alu -1 311 6 233 270 117 44 chr18 10541466 10541603 -75447331 - MER5A DNA MER1_type 0 189 43 708 277 27 0 chr18 10541942 10542162 -75446772 + MIR SINE MIR 13 238 -24 1418 219 151 31 chr18 10543217 10543668 -75445266 - MLT1D LTR MaLR 0 505 1 452 304 37 6 chr18 10543864 10544025 -75444909 - MIR SINE MIR -77 185 20 242 317 77 19 chr18 10544071 10544175 -75444759 + MIR SINE MIR 43 152 -56 1158 184 5 0 chr18 10544299 10544511 -75444423 - AluJo SINE Alu -14 298 86 28 0 0 0 chr18 10544674 10544702 -75444232 + AT_rich Low_complexity Low_complexity 1 28 0 2227 85 0 3 chr18 10544775 10545097 -75443837 - AluY SINE Alu 0 321 1 1474 130 65 0 chr18 10546950 10547166 -75441768 + MER30 DNA MER1_type 1 230 0 228 304 67 30 chr18 10548976 10549111 -75439823 - MIR SINE MIR -12 250 111 370 259 43 43 chr18 10549318 10549434 -75439500 + MIR SINE MIR 7 122 -140 21 0 0 0 chr18 10551390 10551411 -75437523 + AT_rich Low_complexity Low_complexity 1 21 0 7018 118 73 19 chr18 10552402 10553458 -75435476 + Tigger3b DNA MER2_type 2 1128 -1900 2524 108 48 17 chr18 10553458 10553811 -75435123 + THE1B LTR MaLR 1 364 0 7018 118 73 19 chr18 10553811 10553921 -75435013 + Tigger3b DNA MER2_type 1128 1231 0 226 104 21 21 chr18 10554034 10554082 -75434852 + (TG)n Simple_repeat Simple_repeat 1 48 0 2130 122 0 3 chr18 10555262 10555556 -75433378 + AluSc SINE Alu 1 293 -16 3151 112 97 6 chr18 10557507 10557990 -75430944 - MER1A DNA MER1_type -2 527 1 1232 164 19 27 chr18 10558039 10558295 -75430639 - AluJb SINE Alu -25 287 34 451 261 172 4 chr18 10561612 10561933 -75427001 + MLT1I LTR MaLR 19 409 0 232 268 62 10 chr18 10562488 10562585 -75426349 - MIR SINE MIR -79 183 82 692 161 54 0 chr18 10562776 10562888 -75426046 + FLAM_C SINE Alu 2 119 -24 210 71 0 0 chr18 10562888 10562916 -75426018 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 824 217 156 0 chr18 10562928 10563140 -75425794 - MIR SINE MIR 0 262 18 5450 132 26 11 chr18 10563181 10564037 -75424897 - L1MC1 LINE L1 -15 6318 5450 631 253 99 37 chr18 10565141 10565545 -75423389 - L1ME4a LINE L1 -3 6118 5690 257 361 89 24 chr18 10565932 10566101 -75422833 - MIR3 SINE MIR -27 181 2 671 242 23 82 chr18 10566266 10566363 -75422571 + MIR SINE MIR 33 134 -128 1741 164 36 4 chr18 10566363 10566643 -75422291 - AluJo SINE Alu -20 292 4 671 242 23 82 chr18 10566643 10566764 -75422170 + MIR SINE MIR 134 238 -24 2304 92 0 0 chr18 10567410 10567704 -75421230 - AluSx SINE Alu -18 294 1 899 214 23 59 chr18 10568566 10568786 -75420148 - AluJo SINE Alu -16 296 85 642 106 0 12 chr18 10569935 10570020 -75418914 + AluY SINE Alu 195 278 -33 264 100 0 0 chr18 10570020 10570060 -75418874 + (CA)n Simple_repeat Simple_repeat 1 40 0 389 212 97 18 chr18 10570552 10570665 -75418269 - L2 LINE L2 0 3313 3192 327 270 88 29 chr18 10570663 10570800 -75418134 - MIR SINE MIR -12 250 106 * 185 295 66 0 chr18 10570976 10571037 -75417897 + L3 LINE CR1 1131 1195 -382 349 232 95 0 chr18 10571044 10571139 -75417795 + L3 LINE CR1 1318 1421 -156 309 252 68 29 chr18 10571238 10571341 -75417593 - MER5A DNA MER1_type -24 165 59 204 331 41 35 chr18 10571389 10571534 -75417400 - L2 LINE L2 -356 2957 2812 1354 113 128 0 chr18 10573427 10573631 -75415303 - MER30 DNA MER1_type 0 230 1 473 299 28 7 chr18 10574177 10574321 -75414613 - MIR SINE MIR -114 148 2 209 364 11 0 chr18 10575279 10575367 -75413567 + L2 LINE L2 1315 1403 -1911 548 317 219 18 chr18 10575535 10576037 -75412897 + L2 LINE L2 2355 2957 -357 236 250 21 73 chr18 10576047 10576143 -75412791 + L2 LINE L2 3167 3257 -56 25 0 0 0 chr18 10577124 10577149 -75411785 + AT_rich Low_complexity Low_complexity 1 25 0 205 275 0 110 chr18 10577244 10577335 -75411599 + MIR SINE MIR 182 262 0 2161 133 0 0 chr18 10578759 10579060 -75409874 + AluSx SINE Alu 1 301 -11 334 161 18 0 chr18 10579381 10579437 -75409497 - L2 LINE L2 -1 3312 3256 2073 83 15 0 chr18 10580977 10581243 -75407691 - AluY SINE Alu -41 270 1 2178 107 0 17 chr18 10581265 10581565 -75407369 - AluSq SINE Alu -18 295 1 27 0 0 0 chr18 10582034 10582061 -75406873 + AT_rich Low_complexity Low_complexity 1 27 0 234 294 118 12 chr18 10582217 10582302 -75406632 - MIR3 SINE MIR -28 180 87 300 263 101 10 chr18 10582305 10582404 -75406530 - MLT1K LTR MaLR 0 588 481 449 244 90 39 chr18 10583639 10583795 -75405139 - MIR SINE MIR -10 252 89 231 114 0 0 chr18 10584722 10584757 -75404177 + (A)n Simple_repeat Simple_repeat 1 35 0 29 28 0 0 chr18 10584888 10584924 -75404010 + AT_rich Low_complexity Low_complexity 1 36 0 2297 109 0 3 chr18 10585200 10585512 -75403422 - AluY SINE Alu 0 311 1 26 0 0 0 chr18 10587053 10587079 -75401855 + AT_rich Low_complexity Low_complexity 1 26 0 857 193 97 23 chr18 10589618 10589794 -75399140 - MER5A DNA MER1_type 0 189 1 11257 110 25 28 chr18 10589799 10591509 -75397425 + Tigger1 DNA MER2_type 1 1706 -712 672 118 0 84 chr18 10591517 10591636 -75397298 + AluSg/x SINE Alu 202 310 0 1953 140 22 9 chr18 10591638 10591959 -75396975 + Tigger1 DNA MER2_type 2080 2404 -14 581 309 6 6 chr18 10591961 10592129 -75396805 - MER8 DNA MER2_type -71 168 1 1359 184 77 53 chr18 10592645 10592804 -75396130 + L1MC2 LINE L1 4898 5052 -1144 2005 131 31 0 chr18 10592804 10593094 -75395840 - AluSx SINE Alu -13 299 1 1359 184 77 53 chr18 10593094 10593290 -75395644 + L1MC2 LINE L1 5052 5242 -954 8083 26 0 0 chr18 10593290 10594771 -75394163 + L1PA3 LINE L1 4658 6138 -17 180 0 0 0 chr18 10594771 10594791 -75394143 + (CTA)n Simple_repeat Simple_repeat 1 20 0 1359 184 77 53 chr18 10594791 10594984 -75393950 + L1MC2 LINE L1 5241 5450 -746 1588 145 0 79 chr18 10594990 10595185 -75393749 - AluJb SINE Alu 0 328 167 6320 104 20 22 chr18 10595185 10596191 -75392743 - L1PA13 LINE L1 -2 6161 5154 851 109 86 0 chr18 10596191 10596319 -75392615 + MER85 DNA T2_type 1 139 0 6320 104 20 22 chr18 10596319 10597075 -75391859 - L1PA13 LINE L1 -1009 5154 4398 1588 145 0 79 chr18 10597075 10597227 -75391707 - AluJb SINE Alu -161 167 5 2849 170 38 2 chr18 10597230 10597737 -75391197 + L1MC2 LINE L1 5448 5972 -372 2749 182 92 40 chr18 10597782 10598452 -75390482 + L1MB3 LINE L1 5479 6183 0 622 170 27 54 chr18 10598453 10598600 -75390334 + L1MC2 LINE L1 5962 6104 -240 1745 146 75 0 chr18 10599771 10600052 -75388882 - L1MA9 LINE L1 -5 6307 6006 285 29 0 0 chr18 10600202 10600236 -75388698 + (TA)n Simple_repeat Simple_repeat 1 34 0 903 293 58 39 chr18 10600722 10600988 -75387946 + L2 LINE L2 2823 3104 -209 351 0 0 0 chr18 10600988 10601027 -75387907 + (CA)n Simple_repeat Simple_repeat 2 40 0 903 293 58 39 chr18 10601027 10601242 -75387692 + L2 LINE L2 3104 3313 0 431 273 32 82 chr18 10601277 10601497 -75387437 + L2 LINE L2 3104 3312 -1 1920 152 17 0 chr18 10601929 10602225 -75386709 + AluSx SINE Alu 1 301 -11 1439 143 0 5 chr18 10602654 10602871 -75386063 + AluSg/x SINE Alu 95 310 0 1695 164 0 60 chr18 10603796 10604095 -75384839 - AluJo SINE Alu -20 292 12 3943 99 23 2 chr18 10604141 10604708 -75384226 + L1MA3 LINE L1 5703 6281 -24 470 192 67 19 chr18 10605200 10605304 -75383630 - L2 LINE L2 -5 3308 3200 521 260 20 20 chr18 10605348 10605494 -75383440 - MLT1G1 LTR MaLR 0 595 450 2410 269 124 13 chr18 10605503 10606342 -75382592 - MER45C DNA AcHobo -20 933 2 880 231 45 48 chr18 10606388 10606657 -75382277 - MLT1G1 LTR MaLR -225 370 103 588 222 39 53 chr18 10606738 10606945 -75381989 - L2 LINE L2 -886 2428 2225 2187 105 11 0 chr18 10607515 10607801 -75381133 + AluSc SINE Alu 1 289 -20 268 280 0 30 chr18 10608056 10608156 -75380778 + CT-rich Low_complexity Low_complexity 1 97 0 646 240 229 39 chr18 10610316 10610881 -75378053 + L2 LINE L2 2638 3313 0 2221 93 0 65 chr18 10611592 10611914 -75377020 - AluSq SINE Alu -12 301 1 1067 178 162 1 chr18 10611914 10612194 -75376740 - MER33 DNA MER1_type -28 296 1 292 266 92 0 chr18 10614651 10614760 -75374174 - MER91C DNA MER1_type -1 139 21 301 304 65 55 chr18 10615434 10615651 -75373283 + HAL1b LINE L1 66 284 -1064 330 310 74 26 chr18 10615678 10615949 -75372985 - L2 LINE L2 -1347 1967 1684 690 244 24 6 chr18 10615996 10616164 -75372770 - MER5B DNA MER1_type -4 174 4 2130 131 0 7 chr18 10617609 10617907 -75371027 - AluSx SINE Alu -16 296 1 549 44 0 0 chr18 10618498 10618566 -75370368 + (TG)n Simple_repeat Simple_repeat 1 68 0 551 288 202 27 chr18 10619565 10619902 -75369032 + L2 LINE L2 2916 3311 -2 444 258 23 23 chr18 10620122 10620254 -75368680 - MER94 DNA DNA 0 134 3 486 313 125 14 chr18 10620608 10620960 -75367974 - L1ME4a LINE L1 -283 5838 5448 2090 138 0 0 chr18 10621257 10621555 -75367379 + AluSx SINE Alu 5 302 -10 1750 178 7 7 chr18 10621743 10622036 -75366898 - AluJo SINE Alu -19 293 1 189 0 0 0 chr18 10623067 10623088 -75365846 + (TAA)n Simple_repeat Simple_repeat 2 22 0 260 250 205 18 chr18 10623122 10623234 -75365700 - MIR SINE MIR -61 201 69 546 267 99 16 chr18 10623860 10624051 -75364883 - MIR SINE MIR -40 222 16 1774 155 10 32 chr18 10625034 10625343 -75363591 - AluJo SINE Alu -10 302 1 1601 245 108 2 chr18 10625545 10626006 -75362928 - MLT1E2 LTR MaLR 0 626 117 870 153 29 0 chr18 10626022 10626159 -75362775 + FRAM SINE Alu 1 139 -37 223 68 0 45 chr18 10626167 10626211 -75362723 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 3630 161 15 28 chr18 10626213 10626884 -75362050 - L1MB1 LINE L1 -9 6159 5498 494 248 0 23 chr18 10627749 10627882 -75361052 - LTR67 LTR ERVL 0 557 428 24 0 0 0 chr18 10629247 10629271 -75359663 + AT_rich Low_complexity Low_complexity 1 24 0 2371 95 3 0 chr18 10629649 10629945 -75358989 - AluSc SINE Alu -12 297 1 23 0 0 0 chr18 10629945 10629968 -75358966 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr18 10631667 10631691 -75357243 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr18 10632980 10633003 -75355931 + AT_rich Low_complexity Low_complexity 1 23 0 186 293 61 12 chr18 10633248 10633330 -75355604 + L2 LINE L2 3186 3271 -1 1013 174 0 113 chr18 10633495 10633742 -75355192 + AluJo SINE Alu 1 219 -93 502 241 17 17 chr18 10634206 10634322 -75354612 + AluJb SINE Alu 173 288 -24 384 298 124 22 chr18 10635073 10635251 -75353683 - MIR SINE MIR -39 223 28 2099 124 0 0 chr18 10636268 10636558 -75352376 - AluSx SINE Alu -17 295 6 22 35 0 0 chr18 10636675 10636704 -75352230 + AT_rich Low_complexity Low_complexity 1 29 0 451 312 128 1 chr18 10636791 10636986 -75351948 - MIR SINE MIR -32 230 21 213 39 0 0 chr18 10639226 10639252 -75349682 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 811 275 59 31 chr18 10640422 10640779 -75348155 - L1ME LINE L1 -439 5682 5337 2120 107 76 13 chr18 10640779 10641096 -75347838 + MER1B DNA MER1_type 1 337 0 811 275 59 31 chr18 10641096 10641239 -75347695 - L1ME LINE L1 -784 5337 5200 1944 128 62 3 chr18 10641239 10641528 -75347406 - AluSx SINE Alu -6 306 1 811 275 59 31 chr18 10641528 10641809 -75347125 - L1ME LINE L1 -921 5200 4882 200 266 165 0 chr18 10642199 10642278 -75346656 + MIR SINE MIR 139 230 -32 22 35 0 0 chr18 10642365 10642394 -75346540 + AT_rich Low_complexity Low_complexity 1 29 0 2082 141 0 0 chr18 10642511 10642816 -75346118 + AluSx SINE Alu 6 310 -2 385 298 124 22 chr18 10643817 10643995 -75344939 + MIR SINE MIR 28 223 -39 464 241 17 17 chr18 10644746 10644862 -75344072 - AluJb SINE Alu -24 288 173 1029 174 0 113 chr18 10645360 10645607 -75343327 - AluJo SINE Alu -93 219 1 187 293 61 12 chr18 10645772 10645854 -75343080 - L2 LINE L2 -1 3271 3186 23 0 0 0 chr18 10646099 10646122 -75342812 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr18 10647411 10647435 -75341499 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr18 10649134 10649157 -75339777 + AT_rich Low_complexity Low_complexity 1 23 0 2374 95 3 0 chr18 10649157 10649453 -75339481 + AluSc SINE Alu 1 297 -12 24 0 0 0 chr18 10649831 10649855 -75339079 + AT_rich Low_complexity Low_complexity 1 24 0 439 248 0 23 chr18 10651220 10651353 -75337581 + LTR67 LTR ERVL 428 557 0 3307 160 14 19 chr18 10652246 10652889 -75336045 + L1MB1 LINE L1 5520 6159 -9 223 68 0 45 chr18 10652891 10652935 -75335999 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 872 153 29 0 chr18 10652943 10653080 -75335854 - FRAM SINE Alu -37 139 1 1418 254 91 2 chr18 10653117 10653557 -75335377 + MLT1E2 LTR MaLR 148 626 0 1777 156 10 32 chr18 10653759 10654067 -75334867 + AluJo SINE Alu 1 301 -11 552 267 99 16 chr18 10655050 10655241 -75333693 + MIR SINE MIR 16 222 -40 264 250 205 18 chr18 10655867 10655979 -75332955 + MIR SINE MIR 69 201 -61 189 0 0 0 chr18 10656013 10656034 -75332900 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1769 178 7 7 chr18 10657065 10657358 -75331576 + AluJo SINE Alu 1 293 -19 2100 138 0 0 chr18 10657546 10657844 -75331090 - AluSx SINE Alu -10 302 5 376 311 132 12 chr18 10658139 10658473 -75330461 + L1MC/D LINE L1 5443 5816 -1992 390 258 23 23 chr18 10658847 10658979 -75329955 + MER94 DNA DNA 3 134 0 880 124 0 0 chr18 10659015 10659136 -75329798 - AluSq/x SINE Alu -187 126 6 22 35 0 0 chr18 10659253 10659282 -75329652 + AT_rich Low_complexity Low_complexity 1 29 0 448 321 125 0 chr18 10659368 10659552 -75329382 - MIR SINE MIR -32 230 24 213 39 0 0 chr18 10661803 10661829 -75327105 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 811 275 59 31 chr18 10662999 10663356 -75325578 - L1ME LINE L1 -439 5682 5337 2120 107 76 13 chr18 10663356 10663673 -75325261 + MER1B DNA MER1_type 1 337 0 811 275 59 31 chr18 10663673 10663816 -75325118 - L1ME LINE L1 -784 5337 5200 1944 128 62 3 chr18 10663816 10664105 -75324829 - AluSx SINE Alu -6 306 1 811 275 59 31 chr18 10664105 10664386 -75324548 - L1ME LINE L1 -921 5200 4882 1798 168 50 0 chr18 10665122 10665419 -75323515 + AluJb SINE Alu 1 312 0 2121 129 0 0 chr18 10665436 10665731 -75323203 + AluSc SINE Alu 1 295 -14 2141 102 3 3 chr18 10665731 10666016 -75322918 + AluSc SINE Alu 1 285 -24 405 309 143 32 chr18 10666033 10666122 -75322812 + HAL1 LINE L1 1413 1491 -1016 14582 89 16 4 chr18 10666122 10669003 -75319931 - L1PA7 LINE L1 -1 6153 3229 405 309 143 32 chr18 10669003 10669130 -75319804 + HAL1 LINE L1 1491 1653 -854 23 54 0 0 chr18 10669181 10669218 -75319716 + AT_rich Low_complexity Low_complexity 1 37 0 595 103 34 0 chr18 10669684 10669801 -75319133 + (TCTA)n Simple_repeat Simple_repeat 2 122 0 215 56 56 0 chr18 10670090 10670126 -75318808 + CT-rich Low_complexity Low_complexity 3 40 0 653 219 0 0 chr18 10670132 10670255 -75318679 - FLAM_A SINE Alu -2 140 18 259 140 44 26 chr18 10670364 10670478 -75318456 + (TA)n Simple_repeat Simple_repeat 1 116 0 1689 200 3 19 chr18 10670730 10671045 -75317889 + AluJb SINE Alu 1 310 -2 1400 225 40 0 chr18 10671769 10671882 -75317052 + AluJo SINE Alu 7 114 -198 180 0 0 0 chr18 10671882 10671902 -75317032 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1400 225 40 0 chr18 10671902 10672064 -75316870 + AluJo SINE Alu 114 293 -19 311 293 60 67 chr18 10672188 10672338 -75316596 + MIR3 SINE MIR 56 204 -4 342 211 0 0 chr18 10673454 10673530 -75315404 - L1PBa LINE L1 -6500 363 288 * 7961 206 23 3 chr18 10673526 10675219 -75313715 + L1PB2 LINE L1 2688 4425 -1721 195 42 0 0 chr18 10675219 10675243 -75313691 + (TAAAA)n Simple_repeat Simple_repeat 4 27 0 7961 206 23 3 chr18 10675243 10675434 -75313500 + L1PB2 LINE L1 4425 4611 -1535 28412 116 20 66 chr18 10675440 10681500 -75307434 + L1P3 LINE L1 1 5765 -389 1214 210 95 162 chr18 10681500 10682435 -75306499 + LTR28 LTR ERV1 2 1020 0 5275 152 28 2 chr18 10682435 10683938 -75304996 + L1PB2 LINE L1 4603 6142 -9 22 0 0 0 chr18 10683948 10683970 -75304964 + AT_rich Low_complexity Low_complexity 1 22 0 353 310 76 21 chr18 10684029 10684319 -75304615 + L1MC/D LINE L1 4019 4324 -1822 619 219 8 8 chr18 10684321 10684444 -75304490 + FLAM_A SINE Alu 1 123 -10 250 319 42 0 chr18 10684480 10684646 -75304288 + L1MC/D LINE L1 4487 4659 -1487 4301 179 43 10 chr18 10684880 10686243 -75302691 - L1MB2 LINE L1 -4 6167 4758 2373 182 32 12 chr18 10686244 10686750 -75302184 - L1MC2 LINE L1 -17 6327 5812 228 310 16 0 chr18 10686752 10686881 -75302053 + L1MC/D LINE L1 4889 5019 -1127 302 254 24 101 chr18 10686981 10687150 -75301784 + L1MC/D LINE L1 5097 5252 -894 487 253 28 11 chr18 10687152 10687330 -75301604 + L1MC/D LINE L1 5255 5435 -2373 253 338 46 7 chr18 10687771 10687922 -75301012 + L1MC/D LINE L1 5437 5593 -2215 299 302 70 9 chr18 10688101 10688316 -75300618 + LTR16C LTR ERVL 247 474 -17 391 241 0 0 chr18 10689700 10689787 -75299147 - L1MC2 LINE L1 -653 5531 5445 1283 206 133 96 chr18 10689787 10690545 -75298389 + LTR1B LTR ERV1 1 983 -37 632 179 77 38 chr18 10690607 10690846 -75298088 - L1MC2 LINE L1 -730 5448 5202 24 32 0 0 chr18 10690846 10690877 -75298057 + AT_rich Low_complexity Low_complexity 1 31 0 308 396 50 12 chr18 10690994 10691234 -75297700 - L3 LINE CR1 -362 1215 967 312 282 13 0 chr18 10691310 10691388 -75297546 + L3 LINE CR1 850 928 -649 644 263 61 35 chr18 10691463 10691661 -75297273 + L3 LINE CR1 1369 1571 -6 523 284 39 67 chr18 10692228 10692460 -75296474 - MIR SINE MIR -10 252 27 1482 169 40 11 chr18 10692642 10692920 -75296014 - MER61D LTR ERV1 0 501 216 250 132 0 0 chr18 10692975 10693013 -75295921 - MER61B LTR ERV1 -286 139 102 * 708 230 11 11 chr18 10692990 10693168 -75295766 - LTR28 LTR ERV1 -842 178 1 1644 170 52 0 chr18 10693330 10693600 -75295334 - AluJo SINE Alu -15 297 14 375 301 66 42 chr18 10695857 10696023 -75292911 - MIR3 SINE MIR -6 202 33 446 242 69 71 chr18 10696456 10696863 -75292071 - MLT1J LTR MaLR -4 507 53 36 23 0 0 chr18 10696873 10696916 -75292018 + AT_rich Low_complexity Low_complexity 1 43 0 1731 179 7 10 chr18 10696917 10697208 -75291726 - AluJo SINE Alu -22 290 1 2073 149 27 17 chr18 10697364 10697471 -75291463 - MER61C LTR ERV1 0 434 330 4434 68 5 5 chr18 10697471 10698058 -75290876 - L1PA8 LINE L1 -1 6171 5585 2073 149 27 17 chr18 10698058 10698360 -75290574 - MER61C LTR ERV1 -104 330 21 3780 140 74 97 chr18 10699344 10699537 -75289397 + MER4D LTR ERV1 2 198 -705 1945 144 0 20 chr18 10699537 10699829 -75289105 + AluSx SINE Alu 1 286 -26 3780 140 74 97 chr18 10699829 10700559 -75288375 + MER4D LTR ERV1 198 903 0 245 232 29 0 chr18 10700640 10700709 -75288225 - Charlie8 DNA MER1_type -2219 198 128 2234 108 3 22 chr18 10700710 10700859 -75288075 - AluSx SINE Alu -3 309 159 3946 50 19 0 chr18 10700859 10701340 -75287594 - LTR2B LTR ERV1 0 490 1 2234 108 3 22 chr18 10701340 10701505 -75287429 - AluSx SINE Alu -153 159 1 180 0 0 0 chr18 10701516 10701536 -75287398 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1611 117 124 4 chr18 10701539 10701796 -75287138 - AluSg SINE Alu -12 288 1 6306 99 6 29 chr18 10702508 10702844 -75286090 - HSMAR1 DNA Mariner 0 1287 945 2495 37 0 20 chr18 10702844 10703142 -75285792 - AluY SINE Alu -19 292 1 6306 99 6 29 chr18 10703142 10703748 -75285186 - HSMAR1 DNA Mariner -342 945 366 1371 85 85 0 chr18 10703747 10703959 -75284975 - HSMAR1 DNA Mariner -1054 233 4 * 547 204 193 6 chr18 10704366 10704542 -75284392 - MER3 DNA MER1_type 0 209 1 2378 124 20 32 chr18 10704696 10704815 -75284119 - LTR56 LTR ERV1 0 445 326 186 43 0 0 chr18 10704815 10704838 -75284096 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1546 206 7 4 chr18 10704840 10705121 -75283813 - AluJo SINE Alu -30 282 1 2378 124 20 32 chr18 10705121 10705440 -75283494 - LTR56 LTR ERV1 -120 325 9 183 268 0 54 chr18 10705571 10705627 -75283307 - L2 LINE L2 -541 2773 2721 833 144 0 15 chr18 10706960 10707092 -75281842 + AluJb SINE Alu 3 132 -180 21 0 0 0 chr18 10707279 10707300 -75281634 + AT_rich Low_complexity Low_complexity 1 21 0 247 267 89 22 chr18 10707345 10707435 -75281499 - MIR SINE MIR -49 213 118 312 279 38 98 chr18 10707554 10707737 -75281197 + MIR SINE MIR 61 232 -30 363 245 7 109 chr18 10708905 10709052 -75279882 + L2 LINE L2 3182 3313 0 464 277 73 17 chr18 10709397 10709574 -75279360 + MIR SINE MIR 11 197 -65 807 288 74 23 chr18 10710288 10710836 -75278098 + L1MEd LINE L1 965 1574 -4736 2284 128 0 0 chr18 10710861 10711167 -75277767 - AluSx SINE Alu -6 306 1 2123 177 27 42 chr18 10711803 10712277 -75276657 - MLT1C LTR MaLR 0 467 1 634 258 54 59 chr18 10712453 10712540 -75276394 + MLT1J LTR MaLR 71 157 -354 750 236 94 0 chr18 10712540 10712731 -75276203 + MER3 DNA MER1_type 1 209 0 634 258 54 59 chr18 10712731 10713050 -75275884 + MLT1J LTR MaLR 157 475 -36 194 386 20 10 chr18 10715841 10715942 -75272992 + MIR3 SINE MIR 67 168 -40 240 315 74 80 chr18 10715949 10716111 -75272823 + MIR SINE MIR 32 192 -70 21 57 0 0 chr18 10716745 10716780 -75272154 + AT_rich Low_complexity Low_complexity 1 35 0 2093 86 3 68 chr18 10716819 10717143 -75271791 - AluSx SINE Alu -9 303 1 207 146 0 0 chr18 10717714 10717755 -75271179 + (TA)n Simple_repeat Simple_repeat 1 41 0 355 320 113 36 chr18 10717790 10718012 -75270922 + MIR SINE MIR 13 251 -11 385 289 46 33 chr18 10722408 10722560 -75266374 - MER5A DNA MER1_type -27 162 9 183 195 0 24 chr18 10724715 10724756 -75264178 - L3 LINE CR1 -13 1564 1525 273 197 0 45 chr18 10725032 10725098 -75263836 + (TAGG)n Simple_repeat Simple_repeat 1 63 0 222 322 100 0 chr18 10725291 10725381 -75263553 - MIR3 SINE MIR -105 103 5 264 324 53 106 chr18 10726424 10726896 -75262038 - L2 LINE L2 -8 3264 2818 23 0 0 0 chr18 10728351 10728374 -75260560 + AT_rich Low_complexity Low_complexity 1 23 0 895 184 56 0 chr18 10728950 10729129 -75259805 - MER5A DNA MER1_type 0 189 1 619 290 138 21 chr18 10730654 10731030 -75257904 - LTR41 LTR ERVL -7 766 347 487 237 64 26 chr18 10731105 10731261 -75257673 - LTR41 LTR ERVL -611 162 1 23 0 0 0 chr18 10731285 10731308 -75257626 + AT_rich Low_complexity Low_complexity 1 23 0 1479 212 24 7 chr18 10732623 10732915 -75256019 + AluJo SINE Alu 7 303 -9 2291 101 3 0 chr18 10733051 10733347 -75255587 - AluSp SINE Alu -16 297 1 697 264 34 11 chr18 10733634 10733812 -75255122 + MIR SINE MIR 12 193 -69 200 184 0 0 chr18 10734288 10734326 -75254608 + GA-rich Low_complexity Low_complexity 1 38 0 365 345 52 16 chr18 10734876 10735070 -75253864 - MIR SINE MIR -2 260 60 894 287 70 25 chr18 10736118 10736432 -75252502 + L3 LINE CR1 622 949 -628 385 210 72 58 chr18 10736498 10736636 -75252298 + L3 LINE CR1 1144 1283 -294 903 129 12 12 chr18 10736662 10736832 -75252102 + CT-rich Low_complexity Low_complexity 3 172 0 264 226 0 0 chr18 10736848 10736910 -75252024 + CT-rich Low_complexity Low_complexity 2 63 0 377 300 184 17 chr18 10736910 10737143 -75251791 + L3 LINE CR1 1293 1564 -13 2281 98 20 0 chr18 10737974 10738280 -75250654 - AluSx SINE Alu 0 312 1 180 111 0 0 chr18 10740897 10740924 -75248010 + (T)n Simple_repeat Simple_repeat 1 27 0 1404 232 82 0 chr18 10741639 10741954 -75246980 + MER58B DNA MER1_type 1 341 0 793 182 0 0 chr18 10742268 10742389 -75246545 + FLAM_C SINE Alu 2 122 -21 2080 113 3 55 chr18 10742852 10743180 -75245754 - AluSq SINE Alu -2 311 1 403 306 37 0 chr18 10744196 10744304 -75244630 - L2 LINE L2 -7 3306 3195 251 296 71 31 chr18 10744627 10744725 -75244209 - MIR SINE MIR -71 191 90 308 240 87 10 chr18 10744894 10744998 -75243936 + MIR SINE MIR 44 155 -107 275 299 204 37 chr18 10744993 10745321 -75243613 - L2 LINE L2 -12 3301 2919 * 1174 162 14 19 chr18 10745846 10746062 -75242872 - L1PA16 LINE L1 -1 6165 5951 270 56 0 0 chr18 10746737 10746773 -75242161 + (GGAA)n Simple_repeat Simple_repeat 4 39 0 1893 142 25 13 chr18 10746825 10747143 -75241791 - L1MB3 LINE L1 -10 6173 5852 1763 177 17 0 chr18 10747967 10748149 -75240785 - AluJo SINE Alu -7 305 115 348 24 0 0 chr18 10748149 10748190 -75240744 + (TG)n Simple_repeat Simple_repeat 2 42 0 1763 177 17 0 chr18 10748190 10748307 -75240627 - AluJo SINE Alu -197 115 1 2162 156 29 82 chr18 10748660 10749147 -75239787 + MER65C LTR ERV1 1 461 0 197 274 20 0 chr18 10749151 10749202 -75239732 - L2 LINE L2 -21 3292 3241 348 294 126 23 chr18 10749736 10749950 -75238984 + L1MC4 LINE L1 7793 8028 -14 570 278 58 89 chr18 10751744 10752126 -75236808 + MLT1I LTR MaLR 1 370 -39 672 199 7 7 chr18 10752127 10752268 -75236666 - Charlie1 DNA MER1_type -1 2760 2620 * 715 245 142 0 chr18 10752249 10752461 -75236473 - Charlie1 DNA MER1_type -2519 242 1 1817 151 7 18 chr18 10753440 10753724 -75235210 + AluJo SINE Alu 1 281 -31 21 0 0 0 chr18 10755413 10755434 -75233500 + AT_rich Low_complexity Low_complexity 1 21 0 566 231 119 63 chr18 10755732 10756001 -75232933 - MLT1J1 LTR MaLR -13 433 150 27 49 0 0 chr18 10757003 10757044 -75231890 + AT_rich Low_complexity Low_complexity 1 41 0 1420 183 11 11 chr18 10757053 10757326 -75231608 - AluJb SINE Alu 0 312 40 24 0 0 0 chr18 10757356 10757380 -75231554 + AT_rich Low_complexity Low_complexity 1 24 0 513 314 47 0 chr18 10757632 10757801 -75231133 + MIR SINE MIR 58 234 -28 4164 141 48 74 chr18 10758058 10758864 -75230070 + LTR1 LTR ERV1 1 785 0 1837 145 18 11 chr18 10760200 10760482 -75228452 - AluJo SINE Alu 0 312 29 641 102 39 94 chr18 10762567 10762649 -75226285 + L1MB2 LINE L1 6050 6124 -47 2265 103 0 0 chr18 10762649 10762941 -75225993 + AluSg SINE Alu 1 292 -18 641 102 39 94 chr18 10762941 10762985 -75225949 + L1MB2 LINE L1 6124 6169 -2 622 274 93 73 chr18 10763173 10763438 -75225496 - L1M4 LINE L1 -1207 4939 4681 1763 219 24 40 chr18 10763438 10763808 -75225126 - MLT1A1 LTR MaLR 0 365 2 622 274 93 73 chr18 10763808 10764239 -75224695 - L1M4 LINE L1 -1465 4681 4229 311 139 0 0 chr18 10764670 10764713 -75224221 - Tigger3b DNA MER2_type 0 1231 1189 7273 131 43 14 chr18 10765063 10766258 -75222676 - Tigger3b DNA MER2_type -1 1230 1 715 208 91 7 chr18 10766258 10766412 -75222522 + MER3 DNA MER1_type 43 209 0 276 330 87 97 chr18 10767193 10767514 -75221420 - L2 LINE L2 -2 3270 2953 1704 213 103 24 chr18 10767527 10767983 -75220951 - MLT1D LTR MaLR -13 492 1 188 114 29 0 chr18 10768370 10768405 -75220529 + L3 LINE CR1 636 671 -906 860 281 125 24 chr18 10768446 10768781 -75220153 - MLT1K LTR MaLR -65 523 155 22 35 0 0 chr18 10769104 10769133 -75219801 + AT_rich Low_complexity Low_complexity 1 29 0 288 226 68 75 chr18 10770663 10770809 -75218125 + L1MEd LINE L1 627 771 -5348 302 277 156 21 chr18 10773648 10773789 -75215145 + MIR SINE MIR 90 249 -13 1361 225 3 28 chr18 10775776 10776065 -75212869 - AluJo SINE Alu -30 282 1 276 264 39 106 chr18 10777953 10778264 -75210670 - L1MEd LINE L1 -4863 1256 967 191 204 111 0 chr18 10778647 10778701 -75210233 - L2 LINE L2 -11 3261 3202 1063 107 0 7 chr18 10779240 10779390 -75209544 + LOR1b LTR ERV1 1 149 -312 * 2475 152 24 12 chr18 10779382 10779802 -75209132 + LOR1a LTR ERV1 68 492 -5 826 200 11 65 chr18 10779937 10780122 -75208812 + FAM SINE Alu 1 175 0 1557 243 40 46 chr18 10780719 10781373 -75207561 - Charlie2 DNA MER1_type -6 2856 2207 2205 120 0 0 chr18 10781376 10781675 -75207259 - AluSx SINE Alu -13 299 1 3824 153 94 69 chr18 10783520 10784286 -75204648 + LTR1 LTR ERV1 1 785 0 3164 186 9 20 chr18 10785866 10786419 -75202515 - MER44D DNA MER2_type -2 603 2 729 150 107 7 chr18 10787346 10787486 -75201448 - MER20 DNA MER1_type -65 154 1 2091 148 71 27 chr18 10787825 10788339 -75200595 + MLT2A2 LTR ERVL 1 554 0 281 272 65 11 chr18 10789610 10789702 -75199232 + MER119 DNA MER1_type 1 97 -486 483 254 32 8 chr18 10789724 10789850 -75199084 + MER119 DNA MER1_type 455 583 0 306 291 109 9 chr18 10790151 10790261 -75198673 - L2 LINE L2 0 3313 3193 405 248 0 38 chr18 10790291 10790396 -75198538 - MIR SINE MIR -22 240 140 266 229 166 32 chr18 10791032 10791189 -75197745 - L1ME4a LINE L1 0 6121 5944 1625 185 13 26 chr18 10791212 10791520 -75197414 + AluJb SINE Alu 1 304 -8 198 118 0 0 chr18 10792622 10792656 -75196278 + (T)n Simple_repeat Simple_repeat 1 34 0 1651 37 0 5 chr18 10792658 10792848 -75196086 - L1PA4 LINE L1 -3 6152 5964 195 42 0 0 chr18 10794219 10794243 -75194691 + (TCCC)n Simple_repeat Simple_repeat 2 25 0 409 277 98 22 chr18 10794540 10794724 -75194210 + MLT1K LTR MaLR 33 230 -358 979 148 20 0 chr18 10794769 10794918 -75194016 - Tigger3(Golem) DNA MER2_type -1 3028 2877 244 167 0 194 chr18 10794919 10794991 -75193943 - Tigger3(Golem) DNA MER2_type -2970 59 2 233 260 42 31 chr18 10795195 10795291 -75193643 + MLT1K LTR MaLR 460 556 -32 21 0 0 0 chr18 10795695 10795716 -75193218 + AT_rich Low_complexity Low_complexity 1 21 0 8518 137 33 16 chr18 10795887 10797852 -75191082 - L1MA2 LINE L1 -4 6300 4282 2201 116 0 0 chr18 10797852 10798185 -75190749 + AluSq SINE Alu 1 333 0 8518 137 33 16 chr18 10798185 10798786 -75190148 - L1MA2 LINE L1 -2022 4282 3693 2027 146 67 29 chr18 10799750 10800126 -75188808 - MLT1B LTR MaLR 0 390 1 193 152 0 0 chr18 10800341 10800374 -75188560 - MIR SINE MIR -146 62 30 2383 100 0 0 chr18 10800421 10800731 -75188203 - AluSx SINE Alu -2 310 1 417 317 52 22 chr18 10800903 10801133 -75187801 - MIR SINE MIR -13 249 13 296 211 11 53 chr18 10801735 10801830 -75187104 + CT-rich Low_complexity Low_complexity 5 95 0 232 341 8 30 chr18 10802140 10802272 -75186662 + L3b LINE CR1 1370 1498 -85 19192 163 40 37 chr18 10804648 10805454 -75183480 - L1 LINE L1 -2923 4642 3840 311 0 26 0 chr18 10805454 10805493 -75183441 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 19192 163 40 37 chr18 10805493 10807076 -75181858 - L1 LINE L1 -3725 3840 2263 2014 118 43 0 chr18 10807076 10807356 -75181578 - AluSx SINE Alu -20 292 1 19192 163 40 37 chr18 10807356 10807661 -75181273 - L1 LINE L1 -5302 2263 1960 2596 117 25 5 chr18 10807661 10808029 -75180905 - THE1C LTR MaLR 0 375 1 19192 163 40 37 chr18 10808029 10809894 -75179040 - L1 LINE L1 -5605 1960 62 240 173 0 58 chr18 10810618 10810670 -75178264 + MARNA DNA Mariner 199 247 -339 2480 74 0 10 chr18 10810898 10811209 -75177725 - AluY SINE Alu -3 308 1 289 239 51 43 chr18 10811910 10812027 -75176907 - MIR SINE MIR -1 261 144 1440 128 36 110 chr18 10812028 10812395 -75176539 + MLT2C2 LTR ERVL 1 349 -48 303 284 12 0 chr18 10812437 10812518 -75176416 + L1MC4 LINE L1 6614 6695 -1347 192 200 0 0 chr18 10812523 10812563 -75176371 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 297 0 0 0 chr18 10812563 10812596 -75176338 + (GA)n Simple_repeat Simple_repeat 2 34 0 304 119 17 34 chr18 10812636 10812695 -75176239 + MLT2B2 LTR ERVL 458 515 0 454 333 58 0 chr18 10812695 10812833 -75176101 - MIR SINE MIR -115 147 2 1275 246 127 45 chr18 10813322 10813846 -75175088 - MLT1G1 LTR MaLR 0 567 9 476 251 45 121 chr18 10813854 10814209 -75174725 - MLT1G1-int LTR MaLR -6 1365 1038 292 299 0 77 chr18 10814421 10814538 -75174396 - MLT1G1-int LTR MaLR -507 864 757 1083 273 107 34 chr18 10815403 10815788 -75173146 - LTR16A LTR ERVL -2 448 36 1809 170 7 0 chr18 10816788 10817082 -75171852 - AluJb SINE Alu -16 296 1 574 231 33 44 chr18 10817083 10817265 -75171669 - MLT1K LTR MaLR -46 542 363 1538 158 48 24 chr18 10818117 10818409 -75170525 + AluJb SINE Alu 11 309 -3 400 239 174 13 chr18 10819567 10819722 -75169212 - MIR SINE MIR -42 220 41 353 289 110 56 chr18 10820306 10820752 -75168182 + L1MEd LINE L1 543 1012 -5107 871 275 89 45 chr18 10820762 10821388 -75167546 + L1MEd LINE L1 1053 1706 -4604 325 292 86 33 chr18 10821418 10821910 -75167024 + L1MEd LINE L1 1771 2286 -3843 1399 178 25 71 chr18 10821910 10822056 -75166878 + AluJo SINE Alu 1 152 -160 2054 86 11 4 chr18 10822056 10822323 -75166611 + AluY SINE Alu 36 304 -7 1399 178 25 71 chr18 10822323 10822502 -75166432 + AluJo SINE Alu 152 311 -1 325 292 86 33 chr18 10822502 10822687 -75166247 + L1MEd LINE L1 2286 2460 -3669 380 240 224 16 chr18 10824608 10824800 -75164134 - L3b LINE CR1 -89 1494 1263 199 306 59 35 chr18 10825170 10825255 -75163679 + MIR SINE MIR 108 194 -68 1806 162 10 17 chr18 10826075 10826372 -75162562 + AluJo SINE Alu 1 295 -17 1539 165 24 30 chr18 10827890 10828187 -75160747 + AluJo SINE Alu 1 295 -17 24 0 0 0 chr18 10828239 10828263 -75160671 + AT_rich Low_complexity Low_complexity 1 24 0 227 323 204 0 chr18 10828414 10828507 -75160427 - L2 LINE L2 -18 3295 3184 198 169 28 14 chr18 10828789 10828860 -75160074 + (TA)n Simple_repeat Simple_repeat 2 73 0 2179 127 0 0 chr18 10829684 10829984 -75158950 - AluSx SINE Alu -8 304 5 22 0 0 0 chr18 10831081 10831103 -75157831 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr18 10831383 10831407 -75157527 + (GA)n Simple_repeat Simple_repeat 1 24 0 1270 223 77 87 chr18 10831653 10832150 -75156784 - Charlie4a DNA MER1_type 0 508 17 32179 108 11 57 chr18 10832824 10839266 -75149668 - L1PA7 LINE L1 -6 6148 12 281 320 147 20 chr18 10841060 10841210 -75147724 + L2 LINE L2 3104 3272 0 21 0 0 0 chr18 10842002 10842023 -75146911 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr18 10842589 10842618 -75146316 + AT_rich Low_complexity Low_complexity 1 29 0 389 244 267 17 chr18 10843011 10843191 -75145743 + MIR SINE MIR 31 255 -7 2191 108 7 10 chr18 10844526 10844831 -75144103 + AluSx SINE Alu 1 304 -8 2053 106 0 7 chr18 10845067 10845342 -75143592 - AluSg SINE Alu -37 273 1 1841 169 33 9 chr18 10845498 10845835 -75143099 - MER7A DNA MER2_type -1 345 3 282 56 0 0 chr18 10845835 10845871 -75143063 + (TG)n Simple_repeat Simple_repeat 1 36 0 26 64 0 0 chr18 10846075 10846122 -75142812 + AT_rich Low_complexity Low_complexity 1 47 0 625 276 130 0 chr18 10846136 10846390 -75142544 - MLT1H LTR MaLR -19 530 244 22 35 0 0 chr18 10846459 10846488 -75142446 + AT_rich Low_complexity Low_complexity 1 29 0 693 252 194 22 chr18 10846553 10846775 -75142159 + MIR SINE MIR 2 261 -1 24 32 0 0 chr18 10846898 10846929 -75142005 + AT_rich Low_complexity Low_complexity 1 31 0 333 286 208 21 chr18 10847256 10847448 -75141486 - MIR SINE MIR -27 235 8 206 293 203 23 chr18 10847469 10847602 -75141332 - MIR SINE MIR -34 228 72 2570 113 11 0 chr18 10849567 10849938 -75138996 - THE1C LTR MaLR 0 375 1 2061 120 4 0 chr18 10850877 10851153 -75137781 + AluSq SINE Alu 6 282 -31 944 201 117 40 chr18 10851791 10852089 -75136845 + MER5C DNA MER1_type 4 324 0 1772 163 3 20 chr18 10853578 10853872 -75135062 + AluJb SINE Alu 1 289 -23 2488 87 0 3 chr18 10854359 10854670 -75134264 + AluSq SINE Alu 1 310 -3 264 289 106 42 chr18 10856328 10856484 -75132450 + MIR3 SINE MIR 3 169 -78 760 227 38 0 chr18 10857348 10857533 -75131401 + MER3 DNA MER1_type 1 192 -17 3322 155 44 17 chr18 10858198 10858861 -75130073 + L1PA16 LINE L1 5497 6176 0 1884 178 3 10 chr18 10859044 10859358 -75129576 - AluJo SINE Alu 0 312 1 675 258 37 20 chr18 10860285 10860584 -75128350 + L1ME4a LINE L1 5544 5847 -274 2030 132 0 28 chr18 10860714 10861033 -75127901 + AluJb SINE Alu 1 310 -2 2013 142 0 26 chr18 10861304 10861615 -75127319 + AluSx SINE Alu 1 303 -9 1384 191 55 35 chr18 10862368 10862735 -75126199 - MLT1A2 LTR MaLR 0 374 1 202 28 28 28 chr18 10863724 10863760 -75125174 + (CAAA)n Simple_repeat Simple_repeat 4 39 0 36 0 0 68 chr18 10864000 10864024 -75124910 + AT_rich Low_complexity Low_complexity 1 25 -30 2283 66 3 3 chr18 10864024 10864313 -75124621 + AluY SINE Alu 1 289 -22 36 0 0 68 chr18 10864313 10864347 -75124587 + AT_rich Low_complexity Low_complexity 25 55 0 262 286 113 11 chr18 10864780 10864925 -75124009 + MIR SINE MIR 5 158 -50 2610 209 52 25 chr18 10868533 10869168 -75119766 + MER82 DNA MER2_type 2 653 0 27 0 0 0 chr18 10869498 10869525 -75119409 + AT_rich Low_complexity Low_complexity 1 27 0 1636 181 19 19 chr18 10869829 10870154 -75118780 - MER58B DNA MER1_type -16 325 1 183 156 0 0 chr18 10870264 10870296 -75118638 + (TG)n Simple_repeat Simple_repeat 2 33 0 447 284 129 10 chr18 10870339 10870562 -75118372 + MIR SINE MIR 3 249 -13 2285 91 3 3 chr18 10871087 10871383 -75117551 - AluSc SINE Alu -13 296 1 354 215 11 65 chr18 10872834 10872927 -75116007 + L2 LINE L2 3185 3272 0 2076 202 22 89 chr18 10873851 10874523 -75114411 - L1MD2 LINE L1 0 6242 5616 2318 101 3 0 chr18 10874704 10875012 -75113922 - AluSq SINE Alu -4 309 1 218 282 130 30 chr18 10875352 10875483 -75113451 + L2 LINE L2 2909 3052 -220 243 341 68 36 chr18 10875918 10876138 -75112796 + L2 LINE L2 3045 3271 -1 222 118 0 0 chr18 10877472 10877506 -75111428 + (TG)n Simple_repeat Simple_repeat 1 34 0 536 326 52 17 chr18 10877652 10877999 -75110935 - L1MC/D LINE L1 -2004 5804 5446 5315 207 62 27 chr18 10879837 10880013 -75108921 - L1MB8 LINE L1 -2 6176 6008 4528 94 5 14 chr18 10880013 10880653 -75108281 - MER51A LTR ERV1 0 634 1 5315 207 62 27 chr18 10880653 10881566 -75107368 - L1MB8 LINE L1 -170 6008 5128 2201 112 3 0 chr18 10881566 10881871 -75107063 - AluSx SINE Alu -6 306 1 5315 207 62 27 chr18 10881871 10882235 -75106699 - L1MB8 LINE L1 -1050 5128 4778 2365 66 0 26 chr18 10882235 10882538 -75106396 - AluY SINE Alu -16 295 1 5315 207 62 27 chr18 10882538 10883420 -75105514 - L1MB8 LINE L1 -1400 4778 3766 346 344 25 12 chr18 10884179 10884342 -75104592 + MIR SINE MIR 98 262 0 312 304 59 15 chr18 10885268 10885403 -75103531 - MIR SINE MIR 0 262 122 1544 178 21 0 chr18 10885691 10885978 -75102956 + L1PB4 LINE L1 5863 6155 -1 548 225 35 52 chr18 10886165 10886338 -75102596 - MLT1A2 LTR MaLR -51 323 154 28 48 0 0 chr18 10886338 10886380 -75102554 + AT_rich Low_complexity Low_complexity 1 42 0 2110 145 51 33 chr18 10886380 10886834 -75102100 - L1MA5 LINE L1 -10 6290 5829 234 240 3 15 chr18 10886848 10886928 -75102006 + L1P4 LINE L1 5510 5589 -565 2330 65 0 10 chr18 10886971 10887261 -75101673 + AluY SINE Alu 1 287 -24 4702 152 19 27 chr18 10887268 10887790 -75101144 - L1MA4 LINE L1 -5 6477 5965 315 49 0 0 chr18 10887790 10887831 -75101103 + (TG)n Simple_repeat Simple_repeat 2 42 0 4702 152 19 27 chr18 10887831 10888266 -75100668 - L1MA4 LINE L1 -517 5965 5528 444 108 12 48 chr18 10888263 10888346 -75100588 + L1M3f LINE L1 1104 1183 -4145 * 3622 186 17 4 chr18 10888346 10889122 -75099812 - L1MA4 LINE L1 -818 5510 4725 6769 202 44 16 chr18 10889169 10891101 -75097833 - L1MA4 LINE L1 -3228 3100 1047 2394 84 0 0 chr18 10891101 10891399 -75097535 - AluY SINE Alu -13 298 1 6769 202 44 16 chr18 10891399 10892469 -75096465 - L1MA4 LINE L1 -5281 1047 8 543 197 86 8 chr18 10892635 10892752 -75096182 - MER20 DNA MER1_type -1 218 93 263 268 106 11 chr18 10893160 10893338 -75095596 - LTR48B LTR ERV1 -6 599 340 598 164 75 142 chr18 10893736 10894004 -75094930 - MER31-int LTR ERV1 -209 4727 4478 208 286 357 6 chr18 10894629 10894800 -75094134 + MIR SINE MIR 22 252 -10 204 40 0 0 chr18 10896727 10896752 -75092182 + (TC)n Simple_repeat Simple_repeat 2 26 0 1532 179 44 7 chr18 10897465 10897761 -75091173 - AluJb SINE Alu -5 307 1 467 292 93 25 chr18 10898697 10898736 -75090198 - MER5B DNA MER1_type -5 173 138 195 69 0 0 chr18 10898736 10898765 -75090169 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 467 292 93 25 chr18 10898765 10898886 -75090048 - MER5B DNA MER1_type -40 138 2 2107 128 0 3 chr18 10899799 10900089 -75088845 - AluJb SINE Alu -23 289 1 1963 101 97 0 chr18 10901143 10901421 -75087513 + AluSc SINE Alu 1 305 -4 233 250 36 0 chr18 10902216 10902300 -75086634 + (TATATG)n Simple_repeat Simple_repeat 4 90 0 4072 161 61 19 chr18 10902579 10903281 -75085653 + MER44D DNA MER2_type 1 604 -1 237 270 16 16 chr18 10903305 10903368 -75085566 + L2 LINE L2 3207 3269 -3 283 330 128 5 chr18 10904348 10904536 -75084398 - MIR SINE MIR -11 251 41 1126 172 10 5 chr18 10905380 10905572 -75083362 - L1PA15 LINE L1 0 6165 5973 8531 164 83 13 chr18 10905796 10907379 -75081555 + MER52A LTR ERV1 63 1755 0 439 100 0 0 chr18 10907379 10907439 -75081495 - L1MC5 LINE L1 -733 7228 7169 766 290 59 74 chr18 10907545 10908004 -75080930 - L1MC4a LINE L1 -855 6953 6502 473 315 131 33 chr18 10909948 10910345 -75078589 - L2 LINE L2 -31 3282 2847 815 253 33 17 chr18 10910501 10910742 -75078192 + MER46C DNA MER2_type 80 324 -14 393 326 152 41 chr18 10910793 10911554 -75077380 - L3 LINE CR1 -290 1287 442 1465 186 92 43 chr18 10911615 10911724 -75077210 - MER39 LTR ERV1 -2 705 603 2058 135 3 0 chr18 10911724 10912020 -75076914 + AluSg SINE Alu 1 297 -13 1465 186 92 43 chr18 10912020 10912259 -75076675 - MER39 LTR ERV1 -104 603 340 350 241 64 11 chr18 10912376 10912490 -75076444 - MER39 LTR ERV1 -428 114 1 2085 176 135 2 chr18 10913244 10913687 -75075247 - MLT1D LTR MaLR -3 502 1 266 429 52 20 chr18 10914452 10914599 -75074335 + L2 LINE L2 2914 3055 -217 2495 102 54 93 chr18 10914599 10914892 -75074042 + MSTC LTR MaLR 3 275 -153 2187 87 0 39 chr18 10914892 10915201 -75073733 + AluY SINE Alu 1 297 -14 2495 102 54 93 chr18 10915201 10915350 -75073584 + MSTC LTR MaLR 275 428 0 266 429 52 20 chr18 10915350 10915547 -75073387 + L2 LINE L2 3055 3269 -3 205 224 79 26 chr18 10916981 10917057 -75071877 - MIR SINE MIR -79 183 104 350 265 46 66 chr18 10917290 10917486 -75071448 + L2 LINE L2 2858 3049 -223 423 0 0 0 chr18 10917851 10917898 -75071036 + (CA)n Simple_repeat Simple_repeat 2 48 0 236 30 30 0 chr18 10918004 10918037 -75070897 + (GA)n Simple_repeat Simple_repeat 2 35 0 1303 137 84 61 chr18 10919874 10920136 -75068798 + AluJo SINE Alu 24 291 -21 459 266 112 58 chr18 10920206 10920394 -75068540 + MIR SINE MIR 41 238 -24 204 206 0 0 chr18 10920992 10921026 -75067908 + (CAT)n Simple_repeat Simple_repeat 3 36 0 227 257 57 14 chr18 10921607 10921677 -75067257 - MIR SINE MIR -66 142 70 203 299 12 36 chr18 10921793 10921960 -75066974 + (TA)n Simple_repeat Simple_repeat 1 163 0 208 208 42 0 chr18 10922060 10922108 -75066826 + CT-rich Low_complexity Low_complexity 3 52 0 2374 71 30 0 chr18 10922137 10922434 -75066500 + AluY SINE Alu 1 306 -5 2054 134 0 0 chr18 10922444 10922736 -75066198 + AluSx SINE Alu 1 292 -20 200 271 271 0 chr18 10927525 10927610 -75061324 + L3 LINE CR1 191 298 -1279 646 273 29 123 chr18 10927712 10928200 -75060734 + L3 LINE CR1 786 1227 -350 269 258 177 16 chr18 10928225 10928349 -75060585 + L3 LINE CR1 1430 1573 -4 705 327 8 24 chr18 10928664 10928918 -75060016 + MIR SINE MIR 13 262 0 215 288 200 0 chr18 10930054 10930134 -75058800 - L2 LINE L2 -22 3291 3196 279 0 0 0 chr18 10930171 10930202 -75058732 + (TA)n Simple_repeat Simple_repeat 1 31 0 252 0 0 0 chr18 10930201 10930229 -75058705 + (CA)n Simple_repeat Simple_repeat 2 29 0 * 1268 190 12 29 chr18 10930233 10930475 -75058459 + AluJo SINE Alu 45 282 -30 482 184 123 0 chr18 10930609 10930723 -75058211 - L1MB2 LINE L1 -1 6170 6043 2095 177 69 31 chr18 10930723 10931232 -75057702 - L1MA2 LINE L1 -10 6294 5767 212 327 29 29 chr18 10934043 10934147 -75054787 + MIR SINE MIR 30 133 -129 2063 112 6 32 chr18 10934754 10935066 -75053868 - AluSq SINE Alu -9 304 1 24 32 0 0 chr18 10935802 10935833 -75053101 + AT_rich Low_complexity Low_complexity 1 31 0 43987 31 21 1 chr18 10936163 10942195 -75046739 + L1PA2 LINE L1 1 6155 0 192 216 0 0 chr18 10942201 10942252 -75046682 + A-rich Low_complexity Low_complexity 1 51 0 481 303 66 43 chr18 10942795 10943201 -75045733 - L1MB2 LINE L1 -320 5801 5409 378 286 59 30 chr18 10943239 10943442 -75045492 - L1MB2 LINE L1 -817 5329 5121 184 158 195 12 chr18 10943624 10943706 -75045228 + MER5C DNA MER1_type 195 291 -33 372 248 50 25 chr18 10943938 10944059 -75044875 - L2 LINE L2 0 3313 3190 463 296 62 18 chr18 10944201 10944424 -75044510 - MLT1L LTR MaLR -1 604 345 584 215 52 22 chr18 10944617 10944752 -75044182 - MER5A DNA MER1_type -18 171 33 2533 157 41 11 chr18 10944789 10945253 -75043681 + L1MC1 LINE L1 5446 5923 -410 1312 164 35 118 chr18 10945263 10945610 -75043324 + MER7A DNA MER2_type 11 326 -20 2266 110 3 0 chr18 10945611 10945920 -75043014 + AluSg SINE Alu 1 310 0 1581 179 97 26 chr18 10945954 10946335 -75042599 + L1MC1 LINE L1 5922 6329 -4 241 269 28 97 chr18 10946351 10946496 -75042438 - MLT1L LTR MaLR -478 137 3 2160 103 4 0 chr18 10946810 10947111 -75041823 - AluSq SINE Alu 0 302 1 1952 211 63 39 chr18 10947130 10947637 -75041297 + LTR40a LTR ERVL 1 519 0 1995 141 10 0 chr18 10950102 10950406 -75038528 - AluJo SINE Alu -5 307 1 187 299 65 26 chr18 10950487 10950641 -75038293 + L2 LINE L2 3081 3240 -73 230 241 17 0 chr18 10950901 10950959 -75037975 + L2 LINE L2 3003 3061 -252 6670 142 21 16 chr18 10951359 10952581 -75036353 - Tigger3b DNA MER2_type 0 1231 4 1913 145 69 6 chr18 10952827 10953145 -75035789 + MER1B DNA MER1_type 2 339 0 325 254 138 28 chr18 10953978 10954136 -75034798 - MIR SINE MIR -62 146 16 36 0 0 0 chr18 10954220 10954256 -75034678 + AT_rich Low_complexity Low_complexity 1 36 0 279 0 0 0 chr18 10954295 10954326 -75034608 + (TA)n Simple_repeat Simple_repeat 1 31 0 243 0 0 0 chr18 10954325 10954352 -75034582 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 590 157 0 38 chr18 10954380 10954619 -75034315 + (TA)n Simple_repeat Simple_repeat 1 229 0 312 247 32 21 chr18 10954619 10954712 -75034222 - L1MC4 LINE L1 -1337 6705 6612 715 189 3 29 chr18 10954740 10955369 -75033565 + (TA)n Simple_repeat Simple_repeat 1 612 0 737 154 21 28 chr18 10955372 10955515 -75033419 - L1MA1 LINE L1 -11 6291 6150 608 71 0 6 chr18 10955484 10955585 -75033349 - L1MA1 LINE L1 -164 6141 6044 * 1766 186 71 6 chr18 10956460 10956826 -75032108 + MLT1B LTR MaLR 1 390 0 22 56 0 0 chr18 10957093 10957129 -75031805 + AT_rich Low_complexity Low_complexity 1 36 0 1686 144 7 30 chr18 10957622 10957892 -75031042 + AluJb SINE Alu 4 267 -45 2102 210 18 10 chr18 10958114 10958618 -75030316 - L1MB4 LINE L1 0 6180 5673 2119 134 7 0 chr18 10959617 10959923 -75029011 - AluSx SINE Alu 0 312 5 24 32 0 0 chr18 10960223 10960254 -75028680 + AT_rich Low_complexity Low_complexity 1 31 0 206 260 26 13 chr18 10961106 10961183 -75027751 + GA-rich Low_complexity Low_complexity 4 81 0 2046 146 12 40 chr18 10962356 10962759 -75026175 - MER6 DNA MER2_type 0 865 474 5118 198 53 12 chr18 10962759 10963989 -75024945 + L1M2 LINE L1 1889 3068 -3780 288 0 0 0 chr18 10963989 10964021 -75024913 + (CA)n Simple_repeat Simple_repeat 2 33 0 5118 198 53 12 chr18 10964021 10965060 -75023874 + L1M2 LINE L1 3068 4251 -2597 844 268 61 12 chr18 11015103 11015510 -74973424 + L1M2 LINE L1 5084 5510 -1338 22 0 0 0 chr18 11015644 11015666 -74973268 + AT_rich Low_complexity Low_complexity 1 22 0 610 298 63 17 chr18 11015952 11016314 -74972620 + L1ME3A LINE L1 5264 5642 -524 345 307 13 60 chr18 11016345 11016372 -74972562 - MER5B DNA MER1_type -29 149 122 1778 183 39 0 chr18 11016372 11016705 -74972229 - MER7A DNA MER2_type 0 346 3 345 307 13 60 chr18 11016705 11016827 -74972107 - MER5B DNA MER1_type -56 122 7 438 219 10 10 chr18 11016854 11016950 -74971984 + MER5A DNA MER1_type 14 109 -80 383 315 132 44 chr18 11017169 11017464 -74971470 + L1ME3A LINE L1 5646 5966 -204 219 36 0 0 chr18 11018634 11018662 -74970272 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1393 276 117 29 chr18 11019100 11020229 -74968705 - L2 LINE L2 -1 3312 2047 819 289 87 12 chr18 11020229 11020630 -74968304 - L2 LINE L2 -1591 1723 1293 241 275 119 9 chr18 11023556 11023665 -74965269 + MER5A DNA MER1_type 40 160 -29 318 284 45 74 chr18 11024036 11024212 -74964722 - MIR SINE MIR -55 207 37 235 351 30 15 chr18 11024555 11024686 -74964248 + L3b LINE CR1 1108 1240 -343 1458 188 122 28 chr18 11025835 11026197 -74962737 + MSTD LTR MaLR 1 396 0 374 272 44 29 chr18 11028125 11028261 -74960673 - MIR SINE MIR -35 227 90 276 30 0 0 chr18 11031323 11031356 -74957578 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 180 0 0 0 chr18 11031664 11031684 -74957250 + (A)n Simple_repeat Simple_repeat 1 20 0 397 339 47 17 chr18 11032065 11032298 -74956636 + L2 LINE L2 2720 2959 -355 26 30 0 0 chr18 11032721 11032754 -74956180 + AT_rich Low_complexity Low_complexity 1 33 0 212 139 278 14 chr18 11032923 11032995 -74955939 - L2 LINE L2 0 3272 3182 737 174 19 0 chr18 11033126 11033287 -74955647 + L1MA4 LINE L1 3617 3780 -2366 1216 182 5 0 chr18 11033292 11033506 -74955428 + U3 snRNA snRNA 1 215 -2 21 0 0 0 chr18 11033904 11033925 -74955009 + AT_rich Low_complexity Low_complexity 1 21 0 6127 204 35 14 chr18 11033925 11036192 -74952742 + L1MA4 LINE L1 3787 6289 -11 2075 201 51 24 chr18 11036314 11036360 -74952574 - MER6 DNA MER2_type -381 484 441 2001 157 7 0 chr18 11036360 11036659 -74952275 - AluSx SINE Alu -11 301 1 2075 201 51 24 chr18 11036659 11037080 -74951854 - MER6 DNA MER2_type -424 441 4 1329 239 92 27 chr18 11037473 11037950 -74950984 - MLT2B1 LTR ERVL -10 510 3 814 172 75 17 chr18 11040289 11040463 -74948471 + MER5A DNA MER1_type 3 186 -3 2076 126 63 20 chr18 11040791 11041140 -74947794 + THE1B LTR MaLR 1 364 0 378 49 295 0 chr18 11042379 11042440 -74946494 - MADE1 DNA Mariner 0 80 2 403 311 81 6 chr18 11043187 11043348 -74945586 - MIR SINE MIR -56 206 34 243 300 51 0 chr18 11044803 11044907 -74944027 + MER5A DNA MER1_type 61 170 -8 180 0 0 0 chr18 11045028 11045048 -74943886 + (TTA)n Simple_repeat Simple_repeat 2 21 0 211 309 73 0 chr18 11045223 11045291 -74943643 - MIR SINE MIR -113 149 77 300 320 16 55 chr18 11047102 11047150 -74941784 + MIR3 SINE MIR 58 106 -102 2327 110 0 0 chr18 11047150 11047460 -74941474 + AluSg SINE Alu 1 310 0 300 320 16 55 chr18 11047460 11047539 -74941395 + MIR3 SINE MIR 106 180 -28 197 408 56 0 chr18 11047936 11048061 -74940873 + L2 LINE L2 2651 2782 -532 1480 190 16 13 chr18 11050189 11050505 -74938429 - MER7A DNA MER2_type 0 346 32 24 67 0 0 chr18 11050940 11050985 -74937949 + AT_rich Low_complexity Low_complexity 1 45 0 2184 163 71 5 chr18 11051023 11051429 -74937505 - Tigger2a DNA MER2_type -1 433 1 433 106 15 0 chr18 11053006 11053072 -74935862 - Tigger2 DNA MER2_type -102 2616 2550 2153 120 0 40 chr18 11054003 11054328 -74934606 + AluSx SINE Alu 1 312 0 1892 112 0 132 chr18 11055022 11055370 -74933564 + AluSg SINE Alu 1 302 -8 228 298 64 35 chr18 11055840 11055981 -74932953 + Charlie8 DNA MER1_type 24 168 -2249 1519 186 19 45 chr18 11056869 11057181 -74931753 + AluJo SINE Alu 1 304 -8 34 24 0 0 chr18 11057441 11057482 -74931452 + AT_rich Low_complexity Low_complexity 1 41 0 2341 179 24 7 chr18 11058449 11058868 -74930066 + MSTB LTR MaLR 1 426 0 645 292 20 5 chr18 11060199 11060394 -74928540 - MIR SINE MIR -51 211 14 184 313 61 10 chr18 11060842 11060941 -74927993 + MIR SINE MIR 37 140 -122 333 356 50 17 chr18 11060952 11061132 -74927802 - MIR SINE MIR -58 204 19 234 319 17 43 chr18 11062693 11062809 -74926125 - L2 LINE L2 -218 3054 2942 716 106 0 44 chr18 11062817 11062930 -74926004 + FAM SINE Alu 36 143 -42 266 237 169 34 chr18 11063865 11063983 -74924951 + MIR SINE MIR 63 196 -66 204 40 0 0 chr18 11064233 11064258 -74924676 + (TTTTC)n Simple_repeat Simple_repeat 4 28 0 104 46 0 0 chr18 11064374 11064527 -74924407 + AT_rich Low_complexity Low_complexity 1 153 0 387 0 0 0 chr18 11065971 11066014 -74922920 + (CA)n Simple_repeat Simple_repeat 2 44 0 2755 90 22 0 chr18 11066019 11066421 -74922513 - L1PA8 LINE L1 -13 6159 5749 828 157 0 0 chr18 11066421 11066536 -74922398 - FLAM_C SINE Alu -28 115 1 182 247 113 21 chr18 11067327 11067424 -74921510 - L3 LINE CR1 -221 1356 1251 393 22 0 0 chr18 11068485 11068531 -74920403 + (CA)n Simple_repeat Simple_repeat 2 47 0 267 245 236 0 chr18 11069110 11069216 -74919718 + MER94 DNA DNA 2 132 -2 1718 163 0 74 chr18 11069336 11069662 -74919272 - AluJb SINE Alu -10 302 1 2284 98 3 3 chr18 11071229 11071524 -74917410 + AluSq SINE Alu 1 295 -18 1954 157 3 3 chr18 11072651 11072956 -74915978 - AluSx SINE Alu -7 305 1 526 286 14 146 chr18 11074101 11074465 -74914469 + L2 LINE L2 2954 3269 -3 210 259 56 0 chr18 11075407 11075461 -74913473 + L2 LINE L2 3214 3270 -2 584 259 174 10 chr18 11076801 11077002 -74911932 + MIR SINE MIR 1 234 -28 322 238 24 0 chr18 11077152 11077236 -74911698 + L1MB8 LINE L1 4524 4609 -1537 531 316 77 50 chr18 11077426 11077923 -74911011 + L1MB8 LINE L1 4875 5384 -762 1781 169 68 0 chr18 11078025 11078351 -74910583 - MER7A DNA MER2_type 0 346 1 765 245 84 71 chr18 11078427 11078883 -74910051 - MLT1C LTR MaLR -8 497 4 1751 179 25 92 chr18 11078883 11079318 -74909616 - MLT1C-int LTR MaLR -7 1364 959 1918 198 21 53 chr18 11079454 11079924 -74909010 - MLT1C-int LTR MaLR -484 887 433 1100 188 155 45 chr18 11079999 11080308 -74908626 + MER2 DNA MER2_type 2 344 0 810 179 34 58 chr18 11080318 11080525 -74908409 + L1MA10 LINE L1 6126 6327 -7 387 313 155 14 chr18 11080727 11081075 -74907859 + L3 LINE CR1 1166 1562 -15 2131 151 0 0 chr18 11083035 11083347 -74905587 - AluSx SINE Alu 0 312 1 1255 154 51 0 chr18 11084195 11084448 -74904486 - L1MA8 LINE L1 -4 6287 6022 2223 171 61 66 chr18 11088340 11088884 -74900050 - MER67A LTR ERV1 0 543 3 2184 99 18 0 chr18 11089156 11089439 -74899495 + AluSx SINE Alu 21 308 -4 3389 173 24 44 chr18 11089441 11089723 -74899211 + L1MB8 LINE L1 5415 5701 -477 1756 179 7 3 chr18 11089723 11090013 -74898921 + AluJb SINE Alu 1 291 -21 3389 173 24 44 chr18 11090013 11090509 -74898425 + L1MB8 LINE L1 5701 6178 0 1836 119 83 44 chr18 11090598 11090959 -74897975 + THE1C LTR MaLR 1 375 0 2152 126 0 3 chr18 11094368 11094669 -74894265 - AluSg SINE Alu -10 300 1 570 183 21 78 chr18 11095336 11095478 -74893456 + MER91B DNA MER1_type 57 190 0 368 319 130 45 chr18 11096207 11096499 -74892435 - L1ME3A LINE L1 -204 5949 5633 429 219 10 10 chr18 11096721 11096817 -74892117 - MER5A DNA MER1_type -80 109 14 318 313 13 60 chr18 11096844 11096966 -74891968 + MER5B DNA MER1_type 7 122 -56 1793 183 39 0 chr18 11096966 11097299 -74891635 + MER7A DNA MER2_type 3 346 0 318 313 13 60 chr18 11097299 11097326 -74891608 + MER5B DNA MER1_type 122 149 -29 701 301 62 16 chr18 11097347 11097719 -74891215 - L1ME3A LINE L1 -514 5635 5247 22 0 0 0 chr18 11098005 11098027 -74890907 + AT_rich Low_complexity Low_complexity 1 22 0 950 270 59 10 chr18 11098161 11098568 -74890366 - L1ME3A LINE L1 -1338 4791 4365 279 0 0 0 chr18 11098956 11098987 -74889947 + (TA)n Simple_repeat Simple_repeat 2 32 0 799 272 66 72 chr18 11099463 11100452 -74888482 - L1MEd LINE L1 -4690 1620 600 1884 157 17 0 chr18 11101011 11101310 -74887624 + AluSg SINE Alu 1 304 -6 337 327 97 43 chr18 11101454 11101735 -74887199 + L1ME3A LINE L1 5562 5860 -310 195 42 0 0 chr18 11102088 11102112 -74886822 + (T)n Simple_repeat Simple_repeat 1 24 0 43025 29 22 1 chr18 11102117 11108129 -74880805 - L1PA2 LINE L1 0 6155 13 440 134 12 12 chr18 11108299 11108381 -74880553 - L1PB4 LINE L1 -3 6153 6072 42 0 0 0 chr18 11108798 11108840 -74880094 + AT_rich Low_complexity Low_complexity 1 42 0 23 33 0 0 chr18 11109240 11109270 -74879664 + AT_rich Low_complexity Low_complexity 1 30 0 284 318 166 0 chr18 11112737 11112888 -74876046 + MIR SINE MIR 86 261 -1 186 244 0 0 chr18 11113061 11113102 -74875832 + MIR SINE MIR 218 258 -4 2303 86 0 35 chr18 11113484 11113798 -74875136 + AluY SINE Alu 1 303 -8 1580 287 30 4 chr18 11113820 11114280 -74874654 - MLT1J LTR MaLR -38 473 2 264 234 16 0 chr18 11116522 11116586 -74872348 + MIR SINE MIR 97 161 -101 487 60 0 0 chr18 11117868 11117935 -74870999 + MER41A LTR ERV1 400 466 -88 1509 205 7 13 chr18 11118277 11118575 -74870359 + AluJb SINE Alu 1 296 -16 320 295 62 36 chr18 11118581 11118693 -74870241 - MIR3 SINE MIR -51 157 43 2285 226 19 44 chr18 11118942 11120043 -74868891 - L1M4 LINE L1 -411 5773 4707 827 299 4 8 chr18 11120584 11120828 -74868106 - L1ME LINE L1 -423 5747 5505 1998 151 117 8 chr18 11123273 11123657 -74865277 - MSTB LTR MaLR 0 426 1 392 325 63 19 chr18 11124272 11124651 -74864283 + L1ME LINE L1 4957 5352 -794 299 278 9 26 chr18 11124741 11124856 -74864078 + L1ME LINE L1 5483 5595 -526 198 400 25 8 chr18 11125258 11125378 -74863556 - L2 LINE L2 -844 2470 2349 180 302 0 0 chr18 11126151 11126194 -74862740 + L2 LINE L2 3271 3313 0 426 108 0 0 chr18 11127122 11127187 -74861747 + (TCCC)n Simple_repeat Simple_repeat 3 67 0 678 327 145 38 chr18 11127187 11128064 -74860870 + L2 LINE L2 1982 2952 -362 311 363 28 22 chr18 11128688 11128870 -74860064 + L2 LINE L2 3083 3265 -7 598 85 245 9 chr18 11129648 11129754 -74859180 - MER3 DNA MER1_type -70 139 9 325 330 124 61 chr18 11131669 11131855 -74857079 + MIR3 SINE MIR 11 204 -58 1019 62 16 0 chr18 11131990 11132118 -74856816 - THE1C LTR MaLR -1 374 245 632 226 39 6 chr18 11133033 11133183 -74855751 - L1ME3A LINE L1 -3 6159 6004 2051 125 7 7 chr18 11135255 11135550 -74853384 - AluSx SINE Alu -17 295 1 788 156 0 8 chr18 11137073 11137201 -74851733 - FRAM SINE Alu -16 160 34 831 122 8 210 chr18 11137366 11137604 -74851330 + AluJo SINE Alu 29 218 -94 351 260 21 10 chr18 11137915 11138011 -74850923 + MIR SINE MIR 156 252 -10 803 225 35 12 chr18 11138865 11139034 -74849900 + AluJb SINE Alu 122 294 -18 724 172 0 0 chr18 11139106 11139222 -74849712 + FLAM_C SINE Alu 1 116 -27 44 35 0 0 chr18 11139222 11139280 -74849654 + AT_rich Low_complexity Low_complexity 1 58 0 242 333 63 42 chr18 11139515 11139704 -74849230 + MIR SINE MIR 4 196 -66 22 0 0 0 chr18 11140565 11140587 -74848347 + AT_rich Low_complexity Low_complexity 1 22 0 246 276 0 0 chr18 11142193 11142251 -74846683 - L2 LINE L2 -1 3271 3214 1748 201 21 0 chr18 11142535 11142874 -74846060 + MER7A DNA MER2_type 1 344 -2 333 68 0 0 chr18 11143789 11143833 -74845101 + (TC)n Simple_repeat Simple_repeat 1 44 0 190 272 109 11 chr18 11143992 11144084 -74844850 + L2 LINE L2 3201 3301 -12 387 262 40 111 chr18 11144446 11144532 -74844402 + MIR SINE MIR 21 111 -151 2141 143 18 88 chr18 11144532 11144786 -74844148 - MSTB LTR MaLR 0 426 156 213 39 0 0 chr18 11144786 11144812 -74844122 + (TG)n Simple_repeat Simple_repeat 1 26 0 1960 130 3 11 chr18 11144812 11145096 -74843838 - AluSx SINE Alu -30 282 1 2141 143 18 88 chr18 11145096 11145294 -74843640 - MSTB LTR MaLR -268 158 5 387 262 40 111 chr18 11145294 11145472 -74843462 + MIR SINE MIR 111 257 -5 212 329 49 0 chr18 11145894 11145976 -74842958 + MIR SINE MIR 145 230 -32 247 347 54 7 chr18 11146200 11146347 -74842587 - MIR SINE MIR -17 245 92 14632 118 46 17 chr18 11146590 11148938 -74839996 - Tigger1 DNA MER2_type 0 2418 2 1656 198 3 13 chr18 11149090 11149403 -74839531 - AluJo SINE Alu -2 310 1 293 175 18 0 chr18 11154364 11154421 -74834513 + L2 LINE L2 3256 3313 0 293 247 52 91 chr18 11155625 11155779 -74833155 + MIR3 SINE MIR 9 156 -52 21 0 0 31 chr18 11155968 11155985 -74832949 + AT_rich Low_complexity Low_complexity 1 18 -13 2319 65 10 14 chr18 11155985 11156278 -74832656 + AluY SINE Alu 1 292 -19 21 0 0 31 chr18 11156278 11156292 -74832642 + AT_rich Low_complexity Low_complexity 18 31 0 191 333 114 26 chr18 11156395 11156509 -74832425 - MIR3 SINE MIR -39 169 46 188 196 0 20 chr18 11159585 11159636 -74829298 + (TATG)n Simple_repeat Simple_repeat 2 51 0 243 264 0 0 chr18 11160526 11160579 -74828355 - L2 LINE L2 -10 3262 3210 209 228 150 92 chr18 11160988 11161171 -74827763 - MIR SINE MIR -58 204 14 21 57 0 0 chr18 11162138 11162173 -74826761 + AT_rich Low_complexity Low_complexity 1 35 0 1291 130 30 30 chr18 11163070 11163173 -74825761 - MER30 DNA MER1_type 0 230 128 2156 131 0 0 chr18 11163173 11163471 -74825463 + AluSx SINE Alu 1 298 -14 180 0 0 0 chr18 11163471 11163491 -74825443 + (TA)n Simple_repeat Simple_repeat 2 21 0 1291 130 30 30 chr18 11163491 11163616 -74825318 - MER30 DNA MER1_type -100 130 1 1014 182 31 0 chr18 11164666 11164858 -74824076 - MER58A DNA MER1_type -1 223 26 1965 153 3 10 chr18 11165142 11165455 -74823479 - AluJb SINE Alu -1 311 1 186 133 0 0 chr18 11166748 11166778 -74822156 + (T)n Simple_repeat Simple_repeat 1 30 0 225 245 0 0 chr18 11169087 11169136 -74819798 - L2 LINE L2 0 3272 3224 1044 92 0 0 chr18 11169755 11169886 -74819048 + AluSg/x SINE Alu 168 298 -14 359 207 48 133 chr18 11170008 11170278 -74818656 + MER112 DNA MER1_type 3 249 -11 516 72 0 0 chr18 11170620 11170689 -74818245 + (TA)n Simple_repeat Simple_repeat 2 70 0 212 139 278 14 chr18 11170769 11170841 -74818093 + L2 LINE L2 3182 3272 0 26 30 0 0 chr18 11171010 11171043 -74817891 + AT_rich Low_complexity Low_complexity 1 33 0 390 343 47 17 chr18 11171465 11171698 -74817236 - L2 LINE L2 -355 2959 2720 276 30 0 0 chr18 11172404 11172437 -74816497 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 374 272 44 29 chr18 11175500 11175636 -74813298 + MIR SINE MIR 90 227 -35 1484 185 122 28 chr18 11177564 11177926 -74811008 - MSTD LTR MaLR 0 396 1 235 351 30 15 chr18 11179075 11179206 -74809728 - L3b LINE CR1 -343 1240 1108 318 284 45 74 chr18 11179549 11179725 -74809209 + MIR SINE MIR 37 207 -55 241 275 119 9 chr18 11180096 11180205 -74808729 - MER5A DNA MER1_type -29 160 40 802 292 87 12 chr18 11183130 11183531 -74805403 + L2 LINE L2 1293 1723 -1591 1412 276 116 29 chr18 11183531 11184661 -74804273 + L2 LINE L2 2047 3312 -1 255 31 0 0 chr18 11185099 11185131 -74803803 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 25 31 0 0 chr18 11188012 11188044 -74800890 + AT_rich Low_complexity Low_complexity 1 32 0 1579 156 83 28 chr18 11188992 11189280 -74799654 + AluJo SINE Alu 1 304 -8 29027 106 10 17 chr18 11189983 11190674 -74798260 - L1PA7 LINE L1 0 6469 5775 2166 111 26 7 chr18 11190674 11190981 -74797953 - AluSp SINE Alu 0 313 1 29027 106 10 17 chr18 11190981 11196776 -74792158 - L1PA7 LINE L1 -694 5775 5 294 259 149 50 chr18 11196781 11196982 -74791952 - L2 LINE L2 -959 2355 2135 334 269 28 21 chr18 11197216 11197361 -74791573 + CT-rich Low_complexity Low_complexity 3 148 0 2332 112 0 0 chr18 11197373 11197676 -74791258 - AluSc SINE Alu -6 303 1 344 279 182 2 chr18 11198464 11198616 -74790318 + MIR3 SINE MIR 15 190 -18 318 356 50 17 chr18 11200993 11201173 -74787761 + MIR SINE MIR 19 204 -58 193 324 49 15 chr18 11201184 11201314 -74787620 - MIR SINE MIR -67 141 10 634 297 20 5 chr18 11201731 11201926 -74787008 + MIR SINE MIR 14 211 -51 2526 179 24 7 chr18 11203257 11203676 -74785258 - MSTB LTR MaLR 0 426 1 34 24 0 0 chr18 11204643 11204684 -74784250 + AT_rich Low_complexity Low_complexity 1 41 0 1498 186 19 45 chr18 11204944 11205256 -74783678 - AluJo SINE Alu -8 304 1 287 298 64 35 chr18 11206144 11206285 -74782649 - Charlie8 DNA MER1_type -2249 168 24 2251 114 0 3 chr18 11206755 11207061 -74781873 - AluSq SINE Alu -8 305 1 3457 135 19 2 chr18 11208999 11209532 -74779402 + L1MB3 LINE L1 5634 6175 -8 2118 116 6 19 chr18 11209545 11209856 -74779078 + AluSc SINE Alu 1 307 -2 471 329 59 43 chr18 11211275 11211530 -74777404 - MIR SINE MIR -1 261 3 366 256 0 0 chr18 11214625 11214703 -74774231 - MIR3 SINE MIR -23 185 108 2090 126 48 9 chr18 11216395 11216729 -74772205 - MER47A DNA MER2_type 0 366 20 797 131 106 8 chr18 11216744 11216885 -74772049 - THE1B LTR MaLR 0 375 220 23 0 0 0 chr18 11216926 11216949 -74771985 + AT_rich Low_complexity Low_complexity 1 23 0 332 277 139 12 chr18 11217104 11217270 -74771664 + MER5A DNA MER1_type 3 189 0 192 77 0 0 chr18 11217355 11217381 -74771553 + (A)n Simple_repeat Simple_repeat 1 26 0 234 133 0 44 chr18 11217587 11217632 -74771302 - L1MC4 LINE L1 -1340 6702 6660 2952 126 11 49 chr18 11218147 11218451 -74770483 - LTR8A LTR ERV1 -1 726 412 2118 114 10 0 chr18 11218451 11218740 -74770194 + AluSx SINE Alu 5 296 -16 2952 126 11 49 chr18 11218740 11219096 -74769838 - LTR8A LTR ERV1 -315 412 3 216 0 0 0 chr18 11220866 11220890 -74768044 + (GA)n Simple_repeat Simple_repeat 2 25 0 294 386 55 7 chr18 11220922 11221067 -74767867 + L3b LINE CR1 1408 1559 -24 929 174 213 27 chr18 11221967 11222239 -74766695 - MER57A LTR ERV1 0 403 113 3403 155 6 6 chr18 11222240 11222776 -74766158 - MER50 LTR ERV1 -24 710 175 6132 103 9 65 chr18 11222776 11223162 -74765772 - MER50-int LTR ERV1 -541 4339 3933 2224 121 0 10 chr18 11223162 11223476 -74765458 + AluSx SINE Alu 1 311 -1 6132 103 9 65 chr18 11223476 11224120 -74764814 - MER50-int LTR ERV1 -947 3933 3870 2316 114 0 0 chr18 11224120 11224428 -74764506 - AluSc SINE Alu -1 308 1 6132 103 9 65 chr18 11224428 11224674 -74764260 - MER50-int LTR ERV1 -1010 3870 3612 1309 171 0 9 chr18 11224684 11224900 -74764034 - MER50-int LTR ERV1 -6991 214 1 339 200 0 0 chr18 11224900 11224943 -74763991 - MER50-int LTR ERV1 -7161 44 2 4456 148 6 11 chr18 11224945 11225660 -74763274 - MER50 LTR ERV1 -23 711 1 258 284 98 10 chr18 11225660 11225759 -74763175 - MER57B LTR ERV1 -317 117 10 385 259 0 12 chr18 11225764 11225845 -74763089 - L2 LINE L2 -34 3279 3200 186 71 0 0 chr18 11226856 11226884 -74762050 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1012 163 0 0 chr18 11226884 11227037 -74761897 - L1PA16 LINE L1 -18 6148 5996 247 279 58 0 chr18 11228372 11228458 -74760476 - L2 LINE L2 -77 3236 3146 21 0 0 0 chr18 11229815 11229836 -74759098 + AT_rich Low_complexity Low_complexity 1 21 0 240 358 43 6 chr18 11229994 11230156 -74758778 - MIR SINE MIR -80 182 15 2003 90 0 4 chr18 11230747 11231015 -74757919 + AluSc SINE Alu 42 308 -1 1977 145 3 0 chr18 11231603 11231900 -74757034 - AluSx SINE Alu -14 298 1 208 362 94 34 chr18 11231951 11232388 -74756546 - L2 LINE L2 -337 2977 2515 1719 146 60 0 chr18 11233684 11233965 -74754969 + AluJb SINE Alu 1 298 -14 2548 136 73 11 chr18 11234671 11235111 -74753823 - L1MA8 LINE L1 -4 6287 5821 23 0 0 0 chr18 11235239 11235262 -74753672 + AT_rich Low_complexity Low_complexity 1 23 0 269 250 62 0 chr18 11236071 11236151 -74752783 + L1MC4 LINE L1 7088 7172 -870 2373 271 74 67 chr18 11236163 11237615 -74751319 + L1MC4a LINE L1 5875 7336 -472 276 267 128 56 chr18 11237660 11237948 -74750986 + L1MC4 LINE L1 7707 8015 -27 213 39 0 0 chr18 11239810 11239836 -74749098 + (T)n Simple_repeat Simple_repeat 1 26 0 2654 162 15 6 chr18 11240077 11240559 -74748375 + L1PB4 LINE L1 5628 6155 -1 1719 185 0 10 chr18 11242811 11243109 -74745825 - AluJb SINE Alu -17 295 1 649 282 39 39 chr18 11243773 11244028 -74744906 - MIR SINE MIR 0 262 8 580 154 30 8 chr18 11245330 11245469 -74743465 - L1MC4 LINE L1 0 8042 7649 289 270 20 47 chr18 11245443 11245591 -74743343 - L1MC4 LINE L1 -135 7907 7764 * 2233 117 0 0 chr18 11245694 11245994 -74742940 + AluSx SINE Alu 1 300 -12 1095 228 75 0 chr18 11246166 11246420 -74742514 - MLT1B LTR MaLR -2 388 116 1695 207 54 11 chr18 11246168 11246521 -74742413 - MLT1A2 LTR MaLR -4 370 3 28 0 0 0 chr18 11247677 11247705 -74741229 + AT_rich Low_complexity Low_complexity 1 28 0 851 259 123 18 chr18 11247997 11248380 -74740554 + L1MC4 LINE L1 7492 7914 -128 275 0 29 0 chr18 11249420 11249455 -74739479 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 2187 73 22 0 chr18 11250909 11251208 -74737726 - AluY SINE Alu 0 305 1 349 289 0 29 chr18 11251260 11251421 -74737513 + L1M2 LINE L1 5299 5454 -853 825 264 67 12 chr18 11251554 11251808 -74737126 + MLT1C LTR MaLR 200 467 0 344 245 57 19 chr18 11251810 11251916 -74737018 - L2 LINE L2 -997 2317 2208 301 303 70 18 chr18 11252009 11252237 -74736697 + L1ME4a LINE L1 5642 5881 -240 343 244 134 0 chr18 11252263 11252390 -74736544 + L1ME4a LINE L1 5963 6106 -15 1359 242 89 75 chr18 11252944 11253180 -74735754 - L2 LINE L2 -1 3312 3081 1775 168 10 10 chr18 11253180 11253472 -74735462 - AluJo SINE Alu -20 292 1 1359 242 89 75 chr18 11253472 11254166 -74734768 - L2 LINE L2 -232 3081 2358 1340 202 83 112 chr18 11254223 11254377 -74734557 + MLT1C LTR MaLR 1 158 -309 2263 74 7 0 chr18 11254377 11254662 -74734272 + L1PA8 LINE L1 5886 6172 0 1340 202 83 112 chr18 11254662 11254686 -74734248 + MLT1C LTR MaLR 158 181 -286 1826 140 3 24 chr18 11254686 11254978 -74733956 + AluSx SINE Alu 4 289 -23 1340 202 83 112 chr18 11254978 11255279 -74733655 + MLT1C LTR MaLR 181 467 0 1756 268 219 37 chr18 11255281 11256043 -74732891 - L2 LINE L2 -997 2317 1695 2309 84 0 31 chr18 11256043 11256363 -74732571 - AluSg SINE Alu 0 310 1 1756 268 219 37 chr18 11256363 11256724 -74732210 - L2 LINE L2 -1619 1695 990 23 33 0 0 chr18 11257049 11257079 -74731855 + AT_rich Low_complexity Low_complexity 1 30 0 1543 182 21 31 chr18 11257181 11257472 -74731462 + AluJo SINE Alu 1 288 -24 3801 119 29 11 chr18 11258359 11258915 -74730019 + L1PB3 LINE L1 5587 6152 -2 2088 101 38 0 chr18 11259325 11259613 -74729321 - AluSx SINE Alu -13 299 1 1678 167 36 16 chr18 11260197 11260502 -74728432 - AluJb SINE Alu 0 312 2 1472 209 37 39 chr18 11263798 11263846 -74725088 - MER4D LTR ERV1 0 903 856 2405 71 0 0 chr18 11263846 11264140 -74724794 + AluY SINE Alu 1 294 -17 1472 209 37 39 chr18 11264140 11264446 -74724488 - MER4D LTR ERV1 -47 856 550 1353 146 111 20 chr18 11264504 11264757 -74724177 - MER49 LTR ERV1 -638 285 10 326 244 126 24 chr18 11265940 11266067 -74722867 + L2 LINE L2 3129 3268 -4 1746 216 42 24 chr18 11266067 11266400 -74722534 - MER57B LTR ERV1 0 434 90 2216 152 48 35 chr18 11266400 11266795 -74722139 + MER57A LTR ERV1 4 403 0 1746 216 42 24 chr18 11266795 11266887 -74722047 - MER57B LTR ERV1 -344 90 1 327 267 100 8 chr18 11267005 11267125 -74721809 - MIR SINE MIR -13 249 119 208 278 119 24 chr18 11267177 11267303 -74721631 - L2 LINE L2 -1868 1446 1309 702 210 17 0 chr18 11267470 11267589 -74721345 + FLAM_A SINE Alu 2 122 -11 2132 130 0 3 chr18 11267607 11267914 -74721020 + AluSx SINE Alu 7 312 0 2495 111 11 24 chr18 11320993 11321034 -74667900 - THE1C LTR MaLR 0 375 335 1970 145 7 10 chr18 11321034 11321337 -74667597 + AluSx SINE Alu 1 302 -10 2495 111 11 24 chr18 11321337 11321675 -74667259 - THE1C LTR MaLR -40 335 1 205 288 119 0 chr18 11322109 11322168 -74666766 - L2 LINE L2 -71 3201 3136 295 323 75 0 chr18 11323891 11324052 -74664882 - MIR SINE MIR -65 197 25 611 212 27 41 chr18 11324488 11324634 -74664300 + MER3 DNA MER1_type 1 144 -65 470 157 12 0 chr18 11324665 11324748 -74664186 + MER3 DNA MER1_type 126 209 0 628 265 97 10 chr18 11325628 11325824 -74663110 - MIR SINE MIR -3 259 47 1275 147 0 11 chr18 11325888 11326079 -74662855 + AluJo SINE Alu 3 191 -121 1335 143 18 13 chr18 11326405 11326629 -74662305 + AluSg/x SINE Alu 85 309 -1 894 238 14 18 chr18 11326669 11326892 -74662042 - MER58A DNA MER1_type -2 222 1 193 312 13 13 chr18 11327299 11327376 -74661558 + MIR SINE MIR 53 129 -133 270 192 58 0 chr18 11328568 11328620 -74660314 - L2 LINE L2 -5 3267 3213 541 308 66 39 chr18 11328625 11328930 -74660004 - L2 LINE L2 -2 3311 2999 226 246 31 0 chr18 11329742 11329807 -74659127 + (TGGA)n Simple_repeat Simple_repeat 1 67 0 232 182 0 78 chr18 11331732 11331809 -74657125 - L1ME4a LINE L1 -89 6032 5962 962 252 24 0 chr18 11332385 11332639 -74656295 - MIR SINE MIR 0 262 3 2381 81 7 0 chr18 11332908 11333203 -74655731 - AluSp SINE Alu -15 298 2 222 238 109 30 chr18 11333233 11333334 -74655600 - MIR SINE MIR -27 235 127 2317 115 0 0 chr18 11334529 11334842 -74654092 + AluSq SINE Alu 1 313 0 355 96 164 0 chr18 11335033 11335106 -74653828 - L1MB3 LINE L1 0 6183 6099 879 206 111 40 chr18 11335106 11335358 -74653576 - MER57A LTR ERV1 0 403 134 1122 180 94 30 chr18 11335407 11335704 -74653230 - MER33 DNA MER1_type -15 309 1 1340 224 102 39 chr18 11335704 11335769 -74653165 - L1ME4a LINE L1 -210 5960 5901 760 226 102 0 chr18 11335769 11335955 -74652979 - MER3 DNA MER1_type -4 205 1 1340 224 102 39 chr18 11335955 11336412 -74652522 - L1ME4a LINE L1 -269 5901 5408 26 74 0 0 chr18 11336412 11336466 -74652468 + AT_rich Low_complexity Low_complexity 1 54 0 1471 155 29 92 chr18 11336525 11336841 -74652093 - AluJo SINE Alu -16 296 1 517 313 145 36 chr18 11336949 11337871 -74651063 + L2 LINE L2 2282 3311 -2 189 250 0 0 chr18 11337869 11337913 -74651021 - L2 LINE L2 -262 3051 3008 * 2312 108 0 0 chr18 11338034 11338331 -74650603 + AluSq SINE Alu 1 297 -16 637 232 71 0 chr18 11339520 11339688 -74649246 - MIR SINE MIR 0 262 83 277 286 36 36 chr18 11340452 11340564 -74648370 - L2 LINE L2 -1 3312 3201 1789 93 0 8 chr18 11340601 11340847 -74648087 - L1PB1 LINE L1 -1 6150 5907 728 187 8 0 chr18 11340878 11341001 -74647933 + FLAM_C SINE Alu 2 125 -18 221 213 75 25 chr18 11341155 11341235 -74647699 - MIR SINE MIR -62 200 117 513 141 0 0 chr18 11341880 11341972 -74646962 - L1MA4 LINE L1 -5 6295 6204 244 266 75 0 chr18 11343237 11343331 -74645603 + L2 LINE L2 3163 3263 -9 1845 282 154 22 chr18 11343546 11344803 -74644131 - L2 LINE L2 0 3313 1898 270 324 19 19 chr18 11344832 11344937 -74643997 - L2 LINE L2 -25 3247 3143 2060 157 0 3 chr18 11345290 11345603 -74643331 - AluJo SINE Alu 0 312 1 785 217 74 16 chr18 11347432 11347621 -74641313 + MER3 DNA MER1_type 6 205 -4 1473 197 9 38 chr18 11349814 11350134 -74638800 - AluJo SINE Alu -1 311 1 341 102 0 0 chr18 11351068 11351117 -74637817 - L1PA7 LINE L1 -5 6149 6101 478 294 43 22 chr18 11351646 11351877 -74637057 - MIR SINE MIR -25 237 2 182 333 35 11 chr18 11351877 11351958 -74636976 + MIR SINE MIR 158 240 -22 560 233 86 37 chr18 11351996 11352159 -74636775 + MIR SINE MIR 1 171 -91 5938 131 16 21 chr18 11352165 11353234 -74635700 - L1PA15 LINE L1 0 6165 5105 3528 166 3 26 chr18 11353247 11353910 -74635024 + L1PA15 LINE L1 4439 5086 -1060 204 125 0 0 chr18 11354551 11354583 -74634351 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 1873 152 0 24 chr18 11356823 11357119 -74631815 - AluJo SINE Alu -23 289 1 182 308 0 46 chr18 11358475 11358540 -74630394 + MIR SINE MIR 9 70 -192 244 289 122 39 chr18 11360985 11361165 -74627769 + MIR SINE MIR 34 228 -34 370 224 28 19 chr18 11362413 11362520 -74626414 - Charlie2 DNA MER1_type -3 2859 2752 901 224 97 19 chr18 11362530 11362753 -74626181 - Charlie2a DNA MER1_type -1857 1005 757 1931 145 0 0 chr18 11362753 11363071 -74625863 + AluSx SINE Alu 1 318 0 901 224 97 19 chr18 11363071 11363105 -74625829 - Charlie2a DNA MER1_type -2105 757 727 275 203 216 0 chr18 11363097 11363171 -74625763 - Charlie2a DNA MER1_type -2308 474 385 * 277 217 205 0 chr18 11363203 11363286 -74625648 - Charlie2a DNA MER1_type -2495 287 188 1804 175 24 0 chr18 11363286 11363577 -74625357 + AluJb SINE Alu 1 298 -14 403 153 8 8 chr18 11363577 11363695 -74625239 + GA-rich Low_complexity Low_complexity 1 118 0 1728 102 68 41 chr18 11363723 11363989 -74624945 + AluSc SINE Alu 14 286 -23 218 111 67 0 chr18 11364009 11364054 -74624880 + A-rich Low_complexity Low_complexity 2 49 0 433 268 65 0 chr18 11364093 11364216 -74624718 - Charlie2a DNA MER1_type -2645 137 7 574 119 79 30 chr18 11364218 11364319 -74624615 - FLAM_A SINE Alu -14 128 23 220 354 0 24 chr18 11364415 11364497 -74624437 + L2 LINE L2 3160 3239 -33 213 366 19 12 chr18 11364858 11365019 -74623915 - L2 LINE L2 -498 2816 2655 241 56 0 0 chr18 11365262 11365298 -74623636 + L1PA6 LINE L1 6115 6150 -4 799 276 18 13 chr18 11365547 11365775 -74623159 + MIR SINE MIR 34 262 0 718 141 49 42 chr18 11365958 11366100 -74622834 - L1PB4 LINE L1 -5 6151 6009 345 299 60 15 chr18 11367804 11367938 -74620996 + MER5B DNA MER1_type 39 178 0 312 241 62 45 chr18 11368341 11368453 -74620481 - L2 LINE L2 -3 3310 3197 366 343 24 6 chr18 11369336 11369502 -74619432 - MIR SINE MIR -61 201 33 320 198 77 0 chr18 11371410 11371501 -74617433 + L1MC4 LINE L1 6614 6711 -1331 230 157 78 20 chr18 11371514 11371565 -74617369 + L1MEd LINE L1 35 88 -6031 206 236 0 18 chr18 11371565 11371620 -74617314 + (TATATG)n Simple_repeat Simple_repeat 6 59 0 231 400 32 0 chr18 11371772 11371927 -74617007 + L1MEd LINE L1 226 385 -5734 363 253 128 89 chr18 11372045 11372832 -74616102 + L1M4 LINE L1 2884 3701 -2445 1375 247 11 19 chr18 11373252 11373620 -74615314 - MLT1A2 LTR MaLR -9 365 1 243 303 11 0 chr18 11373621 11373710 -74615224 + MIR SINE MIR 158 247 -15 3372 149 100 3 chr18 11376964 11377576 -74611358 + LTR51 LTR ERV1 1 671 0 202 306 16 0 chr18 11377660 11377722 -74611212 + L2 LINE L2 2718 2780 -534 622 279 20 0 chr18 11377902 11378103 -74610831 + MER3 DNA MER1_type 5 209 0 239 214 0 117 chr18 11378357 11378460 -74610474 + MIR SINE MIR 106 196 -66 2272 128 21 90 chr18 11379306 11379682 -74609252 - L1PA16 LINE L1 -1 6165 5827 2398 91 0 3 chr18 11379682 11379989 -74608945 - AluSg1 SINE Alu -3 306 1 2272 128 21 90 chr18 11379989 11380090 -74608844 - L1PA16 LINE L1 -339 5827 5721 209 330 58 21 chr18 11380340 11380528 -74608406 - L2 LINE L2 -568 2746 2552 205 257 71 14 chr18 11380839 11380909 -74608025 - L2 LINE L2 -19 3253 3180 2383 87 0 3 chr18 11380949 11381247 -74607687 + AluSx SINE Alu 1 297 -15 282 277 174 33 chr18 11381551 11381735 -74607199 - MIR SINE MIR -32 230 21 318 167 115 13 chr18 11382724 11382802 -74606132 - LTR67 LTR ERVL -8 549 464 189 299 0 77 chr18 11383553 11383670 -74605264 - L2 LINE L2 -1886 1428 1321 315 164 0 0 chr18 11385270 11385331 -74603603 + (CA)n Simple_repeat Simple_repeat 2 62 0 270 341 22 0 chr18 11388495 11388633 -74600301 - MIR SINE MIR -94 168 28 497 317 10 14 chr18 11388659 11388867 -74600067 - MIR3 SINE MIR 0 208 2 550 212 249 11 chr18 11389777 11389966 -74598968 - MIR SINE MIR -14 248 15 235 316 40 0 chr18 11390211 11390287 -74598647 + MIR SINE MIR 103 181 -81 206 247 0 0 chr18 11390348 11390411 -74598523 - MIR SINE MIR -67 141 78 537 283 64 30 chr18 11390501 11390734 -74598200 - MARNA DNA Mariner -85 501 261 202 166 20 38 chr18 11391362 11391418 -74597516 - MIR SINE MIR -75 133 77 212 265 48 12 chr18 11392225 11392308 -74596626 + MIR SINE MIR 36 121 -87 210 71 0 0 chr18 11392644 11392672 -74596262 + (TC)n Simple_repeat Simple_repeat 1 28 0 620 189 31 99 chr18 11392973 11393164 -74595770 - MER5B DNA MER1_type 0 178 1 351 180 79 34 chr18 11393331 11393420 -74595514 + MER5A DNA MER1_type 9 101 -88 185 309 0 0 chr18 11395523 11395578 -74593356 + L2 LINE L2 3168 3222 -50 1740 195 20 0 chr18 11396699 11397002 -74591932 + AluJo SINE Alu 1 309 -3 2824 6 0 9 chr18 11399093 11399414 -74589520 - AluYb8 SINE Alu 0 318 1 933 186 0 6 chr18 11400775 11400942 -74587992 + FRAM SINE Alu 1 164 -12 226 320 0 13 chr18 11402386 11402461 -74586473 + L2 LINE L2 3237 3310 -3 711 226 13 0 chr18 11403281 11403436 -74585498 + L1MB5 LINE L1 6018 6174 0 180 111 0 0 chr18 11403767 11403794 -74585140 + (TCCC)n Simple_repeat Simple_repeat 2 28 0 385 218 136 9 chr18 11405591 11405701 -74583233 - MER20 DNA MER1_type -95 124 1 29 28 0 0 chr18 11410229 11410265 -74578669 + AT_rich Low_complexity Low_complexity 1 36 0 2318 91 0 0 chr18 11410660 11410969 -74577965 + AluSc SINE Alu 1 309 0 1570 174 4 0 chr18 11411835 11412110 -74576824 + AluJo SINE Alu 18 293 -19 507 263 38 8 chr18 11412370 11412503 -74576431 - L2 LINE L2 0 3313 3177 2533 161 57 5 chr18 11412513 11412955 -74575979 - MER31A LTR ERV1 -20 465 1 1939 265 101 51 chr18 11412961 11414133 -74574801 - L2 LINE L2 -129 3184 1944 483 246 109 46 chr18 11415160 11415335 -74573599 - MER63A DNA MER1_type -23 187 2 279 133 0 0 chr18 11415381 11415426 -74573508 + (TG)n Simple_repeat Simple_repeat 1 45 0 801 174 11 89 chr18 11415544 11415734 -74573200 + MER5B DNA MER1_type 4 178 0 2360 70 0 0 chr18 11416328 11416628 -74572306 + AluY SINE Alu 1 300 -11 274 292 35 76 chr18 11417134 11417305 -74571629 + MLT1K LTR MaLR 5 168 -420 443 218 56 28 chr18 11417562 11417704 -74571230 + L1MC5 LINE L1 7080 7225 -736 2513 247 55 49 chr18 11417899 11418295 -74570639 + L1ME3 LINE L1 4962 5354 -808 2271 80 0 0 chr18 11418295 11418622 -74570312 + AluY SINE Alu 1 327 0 2513 247 55 49 chr18 11418622 11419401 -74569533 + L1ME3 LINE L1 5354 6162 0 1085 210 32 94 chr18 11419498 11419964 -74568970 + L1MC5 LINE L1 7248 7684 -277 2364 54 0 10 chr18 11419994 11420290 -74568644 + AluY SINE Alu 1 293 -18 3076 199 96 96 chr18 11420300 11421373 -74567561 + L1MC4a LINE L1 6735 7807 -1 2186 59 0 14 chr18 11421431 11421740 -74567194 - AluY SINE Alu 0 305 1 188 216 176 27 chr18 11422305 11422379 -74566555 - MIR3 SINE MIR -39 169 85 201 186 0 23 chr18 11422404 11422447 -74566487 + CT-rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr18 11422609 11422630 -74566304 + AT_rich Low_complexity Low_complexity 1 21 0 255 304 0 51 chr18 11423405 11423484 -74565450 + MIR SINE MIR 32 106 -102 196 268 197 0 chr18 11423481 11423552 -74565382 + MIR SINE MIR 64 148 -114 * 1484 136 4 45 chr18 11425668 11425932 -74563002 - AluJo SINE Alu -59 253 1 266 271 102 25 chr18 11425949 11426067 -74562867 - L2 LINE L2 -1 3271 3145 279 200 0 0 chr18 11426077 11426127 -74562807 + MIR SINE MIR 108 157 -105 2225 96 0 13 chr18 11426132 11426435 -74562499 + AluSx SINE Alu 1 299 -13 1162 154 70 0 chr18 11426444 11426658 -74562276 + L1MB7 LINE L1 5887 6115 -69 1423 204 176 23 chr18 11426659 11427090 -74561844 - LTR54B LTR ERV1 0 498 2 418 136 0 0 chr18 11427090 11427156 -74561778 + L1MB7 LINE L1 6114 6179 -5 660 156 78 30 chr18 11427841 11428008 -74560926 - MER5B DNA MER1_type 0 178 4 263 214 17 128 chr18 11428028 11428145 -74560789 + MER5B DNA MER1_type 10 113 -65 190 313 16 0 chr18 11428732 11428796 -74560138 + L2 LINE L2 3207 3271 -1 263 183 17 0 chr18 11430936 11430996 -74557938 - L1MB7 LINE L1 0 6184 6124 * 370 171 79 0 chr18 11430993 11431069 -74557865 + L1PA16 LINE L1 5961 6042 -124 280 234 36 45 chr18 11431124 11431235 -74557699 + L1PB4 LINE L1 6040 6149 -7 * 3018 179 56 33 chr18 11431229 11431909 -74557025 - L1MB7 LINE L1 -43 6141 5435 242 173 135 0 chr18 11432385 11432437 -74556497 - L1PA12 LINE L1 -5834 1747 1689 920 193 18 0 chr18 11432665 11432836 -74556098 + FRAM SINE Alu 1 174 -2 455 184 155 0 chr18 11432968 11433071 -74555863 + MER94 DNA DNA 2 120 -14 391 314 46 24 chr18 11435175 11435366 -74553568 - MIR SINE MIR -14 248 50 660 276 18 0 chr18 11436467 11436630 -74552304 + MLT2F LTR ERVL 3 168 -495 2438 217 46 8 chr18 11436776 11437297 -74551637 - MLT1F LTR MaLR 0 542 2 4413 251 102 20 chr18 11438000 11439662 -74549272 + L1MEc LINE L1 34 1831 -4565 2076 180 98 19 chr18 11442283 11442811 -74546123 + L1MEc LINE L1 1803 2372 -4024 935 225 65 11 chr18 11445061 11445506 -74543428 + MLT1F1 LTR MaLR 2 539 -28 186 212 42 127 chr18 11446864 11446982 -74541952 - L3 LINE CR1 -372 1205 1098 1999 122 46 3 chr18 11447154 11447482 -74541452 - MSTA LTR MaLR -86 342 1 322 229 0 29 chr18 11447484 11447554 -74541380 - L1MC3 LINE L1 -1014 6771 6704 313 246 58 14 chr18 11447750 11447888 -74541046 - MER113 DNA MER1_type? -365 156 13 1571 214 88 26 chr18 11447972 11448402 -74540532 - MLT1C LTR MaLR -10 457 1 195 204 130 0 chr18 11448711 11448765 -74540169 + MIR3 SINE MIR 123 183 -25 2564 67 0 6 chr18 11448924 11449238 -74539696 - AluSx SINE Alu 0 312 1 205 326 0 53 chr18 11449382 11449477 -74539457 - L2 LINE L2 -70 3243 3154 3145 189 15 25 chr18 11449596 11449779 -74539155 + L1MB3 LINE L1 5504 5687 -496 2339 159 59 12 chr18 11449779 11450188 -74538746 + MSTA LTR MaLR 1 428 0 3145 189 15 25 chr18 11450188 11450690 -74538244 + L1MB3 LINE L1 5687 6182 -1 2257 116 0 3 chr18 11451875 11452176 -74536758 + AluSx SINE Alu 1 300 -12 402 293 67 20 chr18 11452610 11452760 -74536174 - MIR SINE MIR -72 190 34 262 267 50 20 chr18 11452797 11452898 -74536036 + MIR SINE MIR 32 135 -127 2185 159 72 0 chr18 11454877 11455291 -74533643 - L1MB3 LINE L1 -28 6155 5712 2248 107 16 13 chr18 11455317 11455627 -74533307 - AluSx SINE Alu -1 311 1 511 240 117 13 chr18 11457135 11457289 -74531645 + MER5B DNA MER1_type 9 178 0 1054 254 127 24 chr18 11457423 11457848 -74531086 + HsTC2 DNA Tc2 84 552 -1346 721 229 66 8 chr18 11457969 11458213 -74530721 + HsTC2 DNA Tc2 1638 1895 -3 291 299 84 23 chr18 11458575 11458752 -74530182 + MIR3 SINE MIR 2 204 -58 1169 153 71 99 chr18 11458970 11459121 -74529813 + MER2 DNA MER2_type 1 155 -189 2430 65 0 3 chr18 11459121 11459414 -74529520 + AluY SINE Alu 1 292 -19 1169 153 71 99 chr18 11459414 11459616 -74529318 + MER2 DNA MER2_type 155 344 0 21 0 0 0 chr18 11459781 11459802 -74529132 + AT_rich Low_complexity Low_complexity 1 21 0 917 232 32 17 chr18 11460304 11460747 -74528187 - LTR39 LTR ERV1 0 783 265 999 128 22 11 chr18 11460784 11460963 -74527971 - LTR39 LTR ERV1 -602 181 1 660 266 68 5 chr18 11462045 11462252 -74526682 + MIR SINE MIR 24 243 -19 4044 168 13 28 chr18 11462558 11463321 -74525613 + LTR1 LTR ERV1 1 752 -33 593 248 75 47 chr18 11463845 11464059 -74524875 - MIR SINE MIR 0 262 43 244 271 14 29 chr18 11464096 11464166 -74524768 - MIR SINE MIR -59 149 81 637 167 160 0 chr18 11464197 11464347 -74524587 - MLT1C LTR MaLR -230 237 64 221 267 17 0 chr18 11465342 11465402 -74523532 - MIR SINE MIR -67 141 81 798 153 120 0 chr18 11465486 11465636 -74523298 - MER69A DNA AcHobo -9 168 1 290 339 48 0 chr18 11465669 11465793 -74523141 - MIR3 SINE MIR 0 208 79 21 0 0 0 chr18 11466143 11466164 -74522770 + AT_rich Low_complexity Low_complexity 1 21 0 1855 152 6 27 chr18 11466183 11466519 -74522415 - L1PB3 LINE L1 -1 6153 5825 1391 229 232 36 chr18 11466564 11467210 -74521724 + LTR41 LTR ERVL 1 773 0 2484 74 0 3 chr18 11467557 11467855 -74521079 - AluY SINE Alu -14 297 1 200 228 13 101 chr18 11467911 11467990 -74520944 - L3b LINE CR1 -8 1575 1504 275 273 16 99 chr18 11468171 11468250 -74520684 - MIR3 SINE MIR -1 207 140 2566 107 28 14 chr18 11468250 11468606 -74520328 - THE1B LTR MaLR -3 361 1 275 273 16 99 chr18 11468606 11468647 -74520287 - MIR3 SINE MIR -68 140 97 33 32 0 32 chr18 11468830 11468856 -74520078 + AT_rich Low_complexity Low_complexity 1 26 -34 2321 88 0 17 chr18 11468856 11469152 -74519782 - AluY SINE Alu -20 291 1 33 32 0 32 chr18 11469152 11469187 -74519747 + AT_rich Low_complexity Low_complexity 26 60 0 1193 230 69 76 chr18 11469618 11469707 -74519227 - MLT1E2 LTR MaLR 0 626 538 2403 154 63 0 chr18 11469707 11470104 -74518830 + MSTB LTR MaLR 4 425 -1 1193 230 69 76 chr18 11470104 11470617 -74518317 - MLT1E2 LTR MaLR -88 538 4 189 231 0 0 chr18 11470841 11470880 -74518054 + MIR SINE MIR 118 156 -106 496 165 10 10 chr18 11471119 11471222 -74517712 - L1MC4 LINE L1 -9 8033 7931 635 262 103 43 chr18 11471408 11471484 -74517450 - L1MC/D LINE L1 -743 5403 5333 2199 116 7 3 chr18 11471484 11471786 -74517148 - AluY SINE Alu -8 303 1 635 262 103 43 chr18 11471786 11472436 -74516498 - L1MC/D LINE L1 -813 5333 4736 906 203 0 0 chr18 11472491 11472654 -74516280 - FRAM SINE Alu -3 163 1 702 170 7 48 chr18 11472658 11472692 -74516242 - FLAM_C SINE Alu -169 143 109 2369 100 23 11 chr18 11472692 11473043 -74515891 - THE1A LTR MaLR 0 355 1 702 170 7 48 chr18 11473043 11473155 -74515779 - FLAM_C SINE Alu -203 109 3 250 304 0 0 chr18 11473212 11473291 -74515643 - L1MC/D LINE L1 -1549 4597 4519 296 267 0 11 chr18 11473335 11473425 -74515509 - L1M4 LINE L1 -1157 5691 5603 584 174 1 3 chr18 11473812 11473926 -74515008 - MLT1C LTR MaLR 0 467 371 5721 88 4 2 chr18 11474066 11474889 -74514045 + L1PA13 LINE L1 5339 6162 -1 2649 244 70 26 chr18 11475197 11475991 -74512943 - MER21B LTR ERV1 -16 847 19 251 187 0 93 chr18 11476022 11476097 -74512837 - MER21B LTR ERV1 -795 68 1 500 291 146 72 chr18 11476294 11476487 -74512447 - L1M4 LINE L1 -4285 2564 2387 2197 92 3 7 chr18 11476487 11476793 -74512141 - AluSq SINE Alu 0 305 1 500 291 146 72 chr18 11476793 11477336 -74511598 - L1M4 LINE L1 -4462 2387 1772 336 291 75 0 chr18 11480285 11480419 -74508515 - L1ME4a LINE L1 -3 6118 5975 214 214 18 18 chr18 11480481 11480537 -74508397 + (CATA)n Simple_repeat Simple_repeat 4 59 0 26 30 0 0 chr18 11480697 11480730 -74508204 + AT_rich Low_complexity Low_complexity 1 33 0 71 63 0 0 chr18 11480755 11480882 -74508052 + AT_rich Low_complexity Low_complexity 1 127 0 456 309 72 17 chr18 11481058 11481294 -74507640 - MLT1L LTR MaLR -3 612 364 281 216 93 21 chr18 11481336 11481433 -74507501 - MLT1J LTR MaLR -337 278 111 350 279 39 0 chr18 11483812 11483916 -74505018 + MER91A DNA MER1_type 3 110 -86 4782 77 14 20 chr18 11484207 11484859 -74504075 - L1PA7 LINE L1 0 6154 5507 427 287 120 34 chr18 11484957 11485369 -74503565 + L1ME4a LINE L1 5381 5828 -293 334 245 41 0 chr18 11485419 11485517 -74503417 + L1ME4a LINE L1 5963 6064 -57 393 273 195 19 chr18 11485997 11486151 -74502783 - MER5A DNA MER1_type 0 189 9 694 254 28 6 chr18 11486177 11486354 -74502580 - MER5A DNA MER1_type 0 189 9 506 266 171 0 chr18 11486387 11486545 -74502389 + MER5A DNA MER1_type 4 188 -1 2206 117 0 3 chr18 11487437 11487735 -74501199 + AluSg SINE Alu 1 297 -13 24 67 0 0 chr18 11488992 11489037 -74499897 + AT_rich Low_complexity Low_complexity 1 45 0 1190 150 81 4 chr18 11489580 11489997 -74498937 - LTR54 LTR ERV1 0 510 1 1768 142 18 14 chr18 11490804 11491118 -74497816 + AluJo SINE Alu 3 317 0 218 138 121 52 chr18 11491363 11491421 -74497513 + MIR SINE MIR 108 169 -93 467 248 18 9 chr18 11492596 11492709 -74496225 - MER81 DNA DNA 0 114 1 639 100 73 182 chr18 11492886 11493015 -74495919 + L1MA10 LINE L1 6108 6205 -129 2506 169 16 28 chr18 11493015 11493068 -74495866 + MSTB LTR MaLR 1 53 -373 2080 127 0 7 chr18 11493068 11493360 -74495574 + AluSx SINE Alu 1 290 -22 2506 169 16 28 chr18 11493360 11493737 -74495197 + MSTB LTR MaLR 53 426 0 639 100 73 182 chr18 11493737 11493827 -74495107 + L1MA10 LINE L1 6205 6303 -31 747 144 17 28 chr18 11493832 11494012 -74494922 + GA-rich Low_complexity Low_complexity 1 178 0 220 262 0 33 chr18 11497928 11497989 -74490945 - L2 LINE L2 -10 3303 3245 1834 131 8 4 chr18 11498425 11498684 -74490250 + AluSx SINE Alu 44 303 -9 2055 165 3 0 chr18 11499481 11499790 -74489144 + 7SLRNA srpRNA srpRNA 1 310 -10 229 200 80 0 chr18 11499862 11499916 -74489018 - L1ME4a LINE L1 0 6121 6058 1987 154 3 0 chr18 11499916 11500228 -74488706 + AluSq SINE Alu 1 300 -13 229 200 80 0 chr18 11500228 11500248 -74488686 - L1ME4a LINE L1 -63 6058 6041 2420 152 29 2 chr18 11500942 11501357 -74487577 - MSTA LTR MaLR -2 426 1 22 0 0 0 chr18 11502163 11502185 -74486749 + AT_rich Low_complexity Low_complexity 1 22 0 215 308 46 0 chr18 11502474 11502539 -74486395 - MIR SINE MIR -73 189 122 371 20 0 20 chr18 11502632 11502681 -74486253 + (CA)n Simple_repeat Simple_repeat 2 49 0 236 262 33 0 chr18 11502765 11502826 -74486108 + C-rich Low_complexity Low_complexity 1 63 0 196 339 0 0 chr18 11503080 11503139 -74485795 - L2 LINE L2 -14 3258 3200 228 308 0 0 chr18 11504037 11504102 -74484832 + G-rich Low_complexity Low_complexity 1 65 0 285 128 0 0 chr18 11504204 11504251 -74484683 + (TG)n Simple_repeat Simple_repeat 2 48 0 1213 163 40 16 chr18 11505033 11505284 -74483650 + L1MA8 LINE L1 6032 6288 -3 181 209 47 0 chr18 11505387 11505430 -74483504 - MIR SINE MIR -67 141 97 304 396 89 0 chr18 11505485 11505654 -74483280 - L2 LINE L2 -2032 1282 1099 508 291 42 12 chr18 11505739 11505904 -74483030 - MER5B DNA MER1_type 0 178 9 602 222 167 0 chr18 11505917 11506079 -74482855 + MER5A DNA MER1_type 1 189 0 380 217 25 61 chr18 11506612 11506770 -74482164 + MIR SINE MIR 19 166 -42 283 292 149 7 chr18 11506947 11507101 -74481833 + MIR SINE MIR 56 231 -31 298 284 34 0 chr18 11507376 11507464 -74481470 + MER5B DNA MER1_type 1 91 -87 21 36 0 0 chr18 11509558 11509586 -74479348 + AT_rich Low_complexity Low_complexity 1 28 0 1059 169 14 41 chr18 11509662 11509881 -74479053 + AluJo SINE Alu 87 299 -13 409 321 50 18 chr18 11509910 11509980 -74478954 - L1ME LINE L1 -378 5743 5677 2342 92 0 0 chr18 11509980 11510286 -74478648 - AluSx SINE Alu -6 306 1 409 321 50 18 chr18 11510286 11510433 -74478501 - L1ME LINE L1 -444 5677 5519 1930 127 6 43 chr18 11510941 11511294 -74477640 - AluJb SINE Alu 0 341 1 202 343 15 0 chr18 11511430 11511497 -74477437 + CT-rich Low_complexity Low_complexity 1 68 0 881 235 231 42 chr18 11511507 11512004 -74476930 - HAL1 LINE L1 -23 2484 1894 694 207 35 29 chr18 11512049 11512223 -74476711 - HAL1 LINE L1 -738 1769 1595 468 145 4 8 chr18 11512224 11512309 -74476625 - MLT1A1 LTR MaLR 0 365 296 272 269 15 0 chr18 11512590 11512657 -74476277 - MIR3 SINE MIR -1 207 140 600 301 73 30 chr18 11512999 11513301 -74475633 - L2 LINE L2 -665 2649 2335 475 307 19 34 chr18 11513492 11513697 -74475237 - L2 LINE L2 -1022 2292 2091 1543 163 20 40 chr18 11514115 11514415 -74474519 + AluJo SINE Alu 1 294 -18 778 276 80 53 chr18 11515270 11515795 -74473139 - L1ME4a LINE L1 -28 6093 5555 1031 203 5 0 chr18 11515801 11515998 -74472936 - L1MC1 LINE L1 -126 6207 6010 341 295 172 52 chr18 11516025 11516100 -74472834 - L1ME4a LINE L1 -558 5563 5498 2680 89 69 10 chr18 11516100 11516504 -74472430 + MSTA LTR MaLR 1 428 0 341 295 172 52 chr18 11516504 11516696 -74472238 - L1ME4a LINE L1 -623 5498 5264 643 318 48 28 chr18 11516862 11517262 -74471672 + L1ME4a LINE L1 5333 5740 -2068 343 308 0 0 chr18 11517279 11517370 -74471564 - MIR SINE MIR -6 256 166 262 324 141 5 chr18 11517371 11517584 -74471350 - MLT1L LTR MaLR -5 610 369 256 225 108 58 chr18 11517878 11517998 -74470936 + L1ME4a LINE L1 5736 5861 -260 2751 119 29 12 chr18 11518005 11518424 -74470510 - MSTB LTR MaLR 0 426 1 1864 142 0 7 chr18 11518432 11518727 -74470207 - AluSx SINE Alu -19 293 1 21 36 0 0 chr18 11518727 11518755 -74470179 + AT_rich Low_complexity Low_complexity 1 28 0 2266 171 84 43 chr18 11518940 11519425 -74469509 + MLT1D LTR MaLR 1 505 0 2019 104 0 4 chr18 11519547 11519826 -74469108 + AluSc SINE Alu 4 281 -28 414 0 0 0 chr18 11519826 11519872 -74469062 + (CA)n Simple_repeat Simple_repeat 2 47 0 363 293 168 24 chr18 11519929 11520096 -74468838 + MIR SINE MIR 11 201 -61 906 159 37 12 chr18 11520096 11520259 -74468675 - MER74B LTR ERVL 0 622 456 630 289 121 80 chr18 11520341 11520621 -74468313 - LTR16A1 LTR ERVL 0 457 151 1697 152 0 15 chr18 11520621 11520890 -74468044 + AluJo SINE Alu 1 265 -47 630 289 121 80 chr18 11520890 11521048 -74467886 - LTR16A1 LTR ERVL -306 151 1 1960 132 10 13 chr18 11521392 11521696 -74467238 - AluJo SINE Alu -9 303 1 1296 171 29 44 chr18 11521709 11521984 -74466950 - MLT1E3 LTR MaLR -9 615 345 1109 184 10 12 chr18 11521991 11522247 -74466687 + MLT1D-int LTR MaLR 1 375 -996 322 333 38 0 chr18 11522299 11522404 -74466530 - HERV16 LTR ERVL -4882 114 6 249 143 0 0 chr18 11522421 11522456 -74466478 - LTR16A1 LTR ERVL -12 445 411 362 303 66 25 chr18 11523635 11523757 -74465177 + L2 LINE L2 3142 3268 -4 308 350 70 14 chr18 11524301 11524444 -74464490 + L1ME4a LINE L1 5959 6109 -12 467 294 102 61 chr18 11524631 11524884 -74464050 + L1ME4a LINE L1 5795 6065 -56 1785 127 31 10 chr18 11524884 11525176 -74463758 - AluSq SINE Alu -15 298 1 467 294 102 61 chr18 11525176 11525235 -74463699 + L1ME4a LINE L1 6065 6120 -1 7158 57 15 19 chr18 11525266 11526292 -74462642 - L1PA6 LINE L1 0 6154 5134 2566 124 30 59 chr18 11526302 11526761 -74462173 - Tigger2 DNA MER2_type 0 2718 2273 469 79 32 0 chr18 11526755 11526818 -74462116 - Tigger2 DNA MER2_type -2653 65 1 * 279 246 0 18 chr18 11527078 11527135 -74461799 - L2 LINE L2 -9 3304 3249 378 278 102 37 chr18 11527377 11527564 -74461370 + MIR SINE MIR 13 211 -51 532 261 91 78 chr18 11528313 11528543 -74460391 + MIR SINE MIR 20 252 -10 920 185 39 17 chr18 11529281 11529513 -74459421 - L1MB8 LINE L1 -1 6177 5941 243 159 0 8 chr18 11529526 11529584 -74459350 - L1MB4 LINE L1 -1 6182 6126 214 320 90 0 chr18 11529703 11529781 -74459153 - MIR SINE MIR -66 142 58 460 284 109 27 chr18 11531300 11531557 -74457377 + L1MC4 LINE L1 7623 7900 -142 1774 143 3 32 chr18 11531811 11532119 -74456815 - AluJo SINE Alu -13 299 1 832 155 24 18 chr18 11533767 11533935 -74454999 + L1PA16 LINE L1 5995 6163 -3 2061 236 16 7 chr18 11533976 11534522 -74454412 + L1MB3 LINE L1 4261 4811 -1335 2150 107 3 7 chr18 11534552 11534722 -74454212 - AluSq SINE Alu -14 299 129 180 0 0 0 chr18 11534722 11534742 -74454192 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2150 107 3 7 chr18 11534742 11534871 -74454063 - AluSq SINE Alu -184 129 1 1053 203 3 131 chr18 11534871 11535082 -74453852 - LTR8A LTR ERV1 -414 313 155 1643 116 124 0 chr18 11535082 11535349 -74453585 + AluSx SINE Alu 11 310 -2 1053 203 3 131 chr18 11535349 11535457 -74453477 - LTR8A LTR ERV1 -572 155 35 1301 161 5 5 chr18 11535460 11535684 -74453250 + L1MB3 LINE L1 5601 5824 -347 1578 126 12 28 chr18 11535684 11535705 -74453229 + MER49 LTR ERV1 2 22 -901 1668 166 24 3 chr18 11535705 11535994 -74452940 + AluJb SINE Alu 1 295 -17 1578 126 12 28 chr18 11535994 11536227 -74452707 + MER49 LTR ERV1 22 252 -671 234 0 0 0 chr18 11536245 11536271 -74452663 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 505 126 0 29 chr18 11536306 11536417 -74452517 + MER4E LTR ERV1 69 284 -588 * 1189 226 66 17 chr18 11536415 11536702 -74452232 + MER4D LTR ERV1 547 847 -56 4611 132 14 20 chr18 11536702 11536844 -74452090 - MER50 LTR ERV1 -23 711 570 1742 101 40 54 chr18 11536844 11537141 -74451793 + AluSc SINE Alu 1 293 -16 4611 132 14 20 chr18 11537141 11537713 -74451221 - MER50 LTR ERV1 -164 570 1 280 125 18 36 chr18 11537718 11537774 -74451160 + MER4D LTR ERV1 849 903 0 1921 168 11 0 chr18 11537774 11538132 -74450802 + L1MB3 LINE L1 5820 6181 -2 1977 113 14 11 chr18 11538222 11538532 -74450402 + AluSq SINE Alu 1 311 0 575 268 259 13 chr18 11539198 11539753 -74449181 + L2 LINE L2 2614 3312 -1 761 272 120 59 chr18 11540617 11541124 -74447810 - MLT1H LTR MaLR 0 549 12 896 152 0 0 chr18 11541507 11541652 -74447282 + FRAM SINE Alu 20 164 -12 1742 136 31 11 chr18 11541833 11542120 -74446814 - AluJb SINE Alu -19 293 1 2179 108 0 10 chr18 11543386 11543692 -74445242 - AluSg SINE Alu -7 303 1 218 263 18 0 chr18 11545015 11545072 -74443862 + CT-rich Low_complexity Low_complexity 1 58 0 308 225 36 99 chr18 11545072 11545183 -74443751 - L1MCa LINE L1 -4317 2109 2006 1910 112 11 3 chr18 11545183 11545470 -74443464 - AluSx SINE Alu -23 289 1 272 192 39 0 chr18 11545492 11545570 -74443364 + (TATAA)n Simple_repeat Simple_repeat 4 84 0 807 153 15 22 chr18 11546922 11547059 -74441875 + AluJo SINE Alu 1 136 -176 255 311 40 0 chr18 11547105 11547179 -74441755 - L2 LINE L2 -275 2997 2921 1022 257 40 13 chr18 11547744 11548048 -74440886 + MER33 DNA MER1_type 13 324 0 227 314 51 25 chr18 11548192 11548310 -74440624 - LTR16C LTR ERVL -12 479 359 2136 163 29 13 chr18 11548436 11548816 -74440118 + MLT1D LTR MaLR 111 496 -9 249 152 0 202 chr18 11549706 11549805 -74439129 + MER91A DNA MER1_type 11 89 -101 2093 113 0 0 chr18 11549837 11550128 -74438806 + AluSx SINE Alu 1 291 -21 269 216 0 0 chr18 11550140 11550191 -74438743 + MER91B DNA MER1_type 80 130 -60 2292 100 0 0 chr18 11551219 11551528 -74437406 + AluSq SINE Alu 1 309 -4 1178 153 24 63 chr18 11552383 11552438 -74436496 + AluJo SINE Alu 68 124 -188 2017 123 3 3 chr18 11552438 11552731 -74436203 - AluSx SINE Alu -19 293 1 1178 153 24 63 chr18 11552731 11552930 -74436004 + AluJo SINE Alu 124 312 0 1774 172 0 0 chr18 11552939 11553242 -74435692 + AluJo SINE Alu 5 307 -5 195 139 0 0 chr18 11553945 11553981 -74434953 + (T)n Simple_repeat Simple_repeat 1 36 0 1924 124 0 23 chr18 11554106 11554412 -74434522 - AluY SINE Alu -12 299 1 2062 147 31 11 chr18 11554412 11554719 -74434215 - L1MB4 LINE L1 -39 6141 5825 1717 144 38 7 chr18 11554719 11555010 -74433924 + AluJb SINE Alu 1 300 -12 2062 147 31 11 chr18 11555010 11555056 -74433878 - L1MB4 LINE L1 -355 5825 5781 731 104 0 9 chr18 11555056 11555162 -74433772 - MER46A DNA MER2_type 0 236 132 350 163 50 12 chr18 11555162 11555242 -74433692 - L1MB4 LINE L1 -832 5336 5254 1029 179 0 0 chr18 11555243 11555439 -74433495 - L1MB4 LINE L1 -852 5294 5099 268 274 55 0 chr18 11555739 11555812 -74433122 - MLT1K LTR MaLR -2 586 510 1891 178 44 12 chr18 11555928 11556270 -74432664 + MLT1A1 LTR MaLR 9 361 -4 304 191 16 48 chr18 11556545 11556608 -74432326 - MLT1K LTR MaLR -80 508 448 321 215 46 0 chr18 11556881 11556946 -74431988 - MLT1K LTR MaLR -442 146 79 2346 87 3 0 chr18 11557930 11558240 -74430694 + AluSp SINE Alu 1 311 -2 1661 180 74 0 chr18 11558254 11558577 -74430357 - MER7A DNA MER2_type -1 345 1 1232 236 43 81 chr18 11559205 11559530 -74429404 - MER87 LTR ERV1 0 556 216 2088 108 3 7 chr18 11560804 11561100 -74427834 + AluSx SINE Alu 1 295 -17 2150 108 0 3 chr18 11561750 11562046 -74426888 + AluSc SINE Alu 1 295 -14 378 295 49 33 chr18 11562779 11562962 -74425972 - MIR SINE MIR -52 210 23 1796 125 0 48 chr18 11563131 11563442 -74425492 - AluJo SINE Alu -16 296 1 208 343 59 20 chr18 11564200 11564302 -74424632 + MIR3 SINE MIR 10 115 -93 339 265 24 84 chr18 11564338 11564504 -74424430 + LTR33 LTR ERVL 44 199 -322 2624 101 3 8 chr18 11564563 11564929 -74424005 - THE1B LTR MaLR 0 364 1 381 291 83 96 chr18 11566113 11566218 -74422716 + L2 LINE L2 2607 2712 -560 2034 123 3 0 chr18 11566218 11566510 -74422424 + AluSq SINE Alu 1 293 -20 381 291 83 96 chr18 11566510 11566897 -74422037 + L2 LINE L2 2712 3116 -156 375 279 71 14 chr18 11566941 11567081 -74421853 + MIR SINE MIR 105 252 -10 855 209 0 0 chr18 11567095 11567258 -74421676 + FRAM SINE Alu 1 160 -16 201 271 62 76 chr18 11567546 11567690 -74421244 - MIR SINE MIR -15 247 106 182 200 108 77 chr18 11567805 11567870 -74421064 + L2 LINE L2 3186 3252 -61 583 205 187 12 chr18 11568080 11568246 -74420688 - LTR16C LTR ERVL -20 471 277 262 257 171 0 chr18 11568248 11568318 -74420616 + MER58B DNA MER1_type 3 84 -257 248 26 0 53 chr18 11568321 11568359 -74420575 + (TTTTA)n Simple_repeat Simple_repeat 5 40 0 1375 85 43 0 chr18 11568359 11568547 -74420387 - AluSg/x SINE Alu -32 278 83 1049 207 39 19 chr18 11568547 11568803 -74420131 + MER58B DNA MER1_type 77 337 -4 241 299 75 9 chr18 11568851 11568958 -74419976 - LTR16C LTR ERVL -277 214 101 1457 203 0 28 chr18 11569290 11569610 -74419324 + AluJo SINE Alu 1 311 -1 300 255 47 28 chr18 11570129 11570235 -74418699 + L1 LINE L1 5290 5397 -749 1583 167 3 37 chr18 11570429 11570728 -74418206 - AluJo SINE Alu -17 295 7 355 273 71 49 chr18 11571847 11571959 -74416975 + L1MC4a LINE L1 5263 5371 -780 2138 118 3 0 chr18 11571959 11572255 -74416679 + AluSq SINE Alu 1 297 -16 355 273 71 49 chr18 11572255 11572526 -74416408 + L1MC4a LINE L1 5371 5659 -492 790 235 143 5 chr18 11572534 11572751 -74416183 + MLT1J LTR MaLR 2 248 -263 963 201 133 32 chr18 11572763 11573041 -74415893 + MLT1C LTR MaLR 162 467 0 271 341 15 8 chr18 11573041 11573173 -74415761 + L1MC4a LINE L1 5774 5906 -1902 1415 188 84 31 chr18 11573550 11573870 -74415064 + MLT1D LTR MaLR 1 337 -168 1953 130 3 13 chr18 11576576 11576877 -74412057 - AluSx SINE Alu -1 311 14 313 358 83 13 chr18 11577109 11577411 -74411523 - L1MC4 LINE L1 -318 7724 7402 241 251 97 93 chr18 11577432 11577711 -74411223 - L1MC4a LINE L1 -1245 6563 6284 360 299 104 67 chr18 11577794 11578122 -74410812 + HAL1 LINE L1 67 406 -2101 561 298 159 26 chr18 11578187 11578647 -74410287 + LTR33 LTR ERVL 1 521 0 344 289 82 33 chr18 11578694 11578964 -74409970 + HAL1 LINE L1 760 1042 -1465 1279 275 38 41 chr18 11579153 11579782 -74409152 + HAL1 LINE L1 1167 1793 -714 19564 162 14 15 chr18 11580102 11587105 -74401829 + L1PA14 LINE L1 4 7262 -337 1948 94 69 0 chr18 11587105 11587381 -74401553 + AluY SINE Alu 1 295 -16 19564 162 14 15 chr18 11587381 11587710 -74401224 + L1PA14 LINE L1 7262 7590 -9 291 276 0 79 chr18 11587714 11587760 -74401174 + L1MC4a LINE L1 5817 5865 -1943 1244 179 124 25 chr18 11587760 11588060 -74400874 - AluJo SINE Alu 0 312 1 291 276 0 79 chr18 11588060 11588140 -74400794 + L1MC4a LINE L1 5865 5933 -1875 699 169 114 0 chr18 11588209 11588375 -74400559 - MER53 DNA DNA -4 185 1 220 368 53 0 chr18 11589309 11589423 -74399511 - MIR3 SINE MIR -31 177 58 302 280 0 0 chr18 11590049 11590124 -74398810 + LTR16A1 LTR ERVL 383 457 0 809 111 8 16 chr18 11590154 11590280 -74398654 + FLAM_C SINE Alu 6 130 -13 742 231 84 5 chr18 11590319 11590522 -74398412 + L2 LINE L2 3094 3312 -1 185 412 10 0 chr18 11590496 11590598 -74398336 - L2 LINE L2 -11 3302 3200 * 339 237 0 13 chr18 11590958 11591034 -74397900 + MLT1L LTR MaLR 1 75 -540 554 234 47 41 chr18 11591041 11591212 -74397722 - MER63A DNA MER1_type 0 210 39 308 140 0 0 chr18 11591284 11591334 -74397600 + MLT1J LTR MaLR 91 140 -371 1986 107 20 10 chr18 11591929 11592250 -74396684 + AluSx SINE Alu 1 312 0 24 85 0 0 chr18 11593361 11593420 -74395514 + AT_rich Low_complexity Low_complexity 1 59 0 204 301 107 19 chr18 11593605 11593708 -74395226 + MIR SINE MIR 21 132 -76 1718 182 3 0 chr18 11594037 11594339 -74394595 + AluJb SINE Alu 1 303 -9 1017 307 66 32 chr18 11594950 11595036 -74393898 - MER115 DNA AcHobo 0 693 611 1549 160 41 0 chr18 11595036 11595305 -74393629 + AluJb SINE Alu 1 280 -32 878 116 14 0 chr18 11595305 11595451 -74393483 + (GGAA)n Simple_repeat Simple_repeat 1 148 0 1017 307 66 32 chr18 11595451 11596008 -74392926 - MER115 DNA AcHobo -81 612 1 1655 248 73 15 chr18 11596530 11596690 -74392244 + L1MC4a LINE L1 6443 6592 -1216 276 30 0 0 chr18 11596690 11596723 -74392211 + (TG)n Simple_repeat Simple_repeat 1 33 0 1655 248 73 15 chr18 11596723 11597098 -74391836 + L1MC4a LINE L1 6592 7009 -799 1233 223 53 40 chr18 11597100 11597425 -74391509 + L1MC4 LINE L1 7238 7570 -472 2221 77 0 0 chr18 11597425 11597710 -74391224 + AluSx SINE Alu 23 307 -5 1233 223 53 40 chr18 11597710 11597783 -74391151 + L1MC4 LINE L1 7570 7641 -401 2122 101 0 10 chr18 11598285 11598583 -74390351 + AluSc SINE Alu 1 295 -14 460 284 109 27 chr18 11599376 11599633 -74389301 + L1MC4 LINE L1 7623 7900 -142 1790 144 3 32 chr18 11599882 11600195 -74388739 - AluJo SINE Alu -8 304 1 834 155 24 18 chr18 11601843 11602011 -74386923 + L1PA16 LINE L1 5995 6163 -3 2089 236 16 7 chr18 11602052 11602598 -74386336 + L1 LINE L1 4261 4811 -1335 1916 115 42 10 chr18 11602627 11602915 -74386019 - AluSp SINE Alu -14 299 3 2627 273 116 13 chr18 11603114 11603235 -74385699 + MER69B DNA AcHobo 6 113 -2413 2031 117 37 7 chr18 11603235 11603707 -74385227 + AluSx SINE Alu 1 481 0 234 0 0 0 chr18 11603706 11603732 -74385202 + (GGAA)n Simple_repeat Simple_repeat 3 28 0 2627 273 116 13 chr18 11603707 11604507 -74384427 + MER69B DNA AcHobo 113 995 -231 1063 111 0 0 chr18 11604507 11604642 -74384292 + AluSq/x SINE Alu 1 135 -178 1999 148 7 0 chr18 11604642 11604939 -74383995 + AluSq SINE Alu 1 299 -14 236 253 103 41 chr18 11604939 11604996 -74383938 + MER69B DNA AcHobo 985 1037 -1489 2381 65 4 0 chr18 11604996 11605272 -74383662 + AluY SINE Alu 11 287 -24 231 36 0 0 chr18 11605272 11605300 -74383634 + (TA)n Simple_repeat Simple_repeat 2 29 0 236 253 103 41 chr18 11605300 11605387 -74383547 + MER69B DNA AcHobo 1036 1139 -87 1701 228 49 15 chr18 11605387 11605777 -74383157 + LTR40a LTR ERVL 1 403 -116 698 176 66 0 chr18 11605803 11605953 -74382981 + LTR40b LTR ERVL 308 462 0 439 214 11 0 chr18 11605953 11606041 -74382893 + MER69B DNA AcHobo 1135 1223 -3 523 329 72 17 chr18 11606350 11606642 -74382292 - MLT1L LTR MaLR 0 615 308 2266 128 0 3 chr18 11606824 11607137 -74381797 - AluSx SINE Alu 0 312 1 885 185 26 11 chr18 11607239 11607428 -74381506 + L1MC3 LINE L1 7586 7777 -8 2275 102 0 3 chr18 11607778 11608072 -74380862 - AluSx SINE Alu -19 293 1 726 256 207 44 chr18 11608157 11608543 -74380391 + LTR16A LTR ERVL 2 450 0 289 344 40 0 chr18 11608587 11608712 -74380222 + LTR33A LTR ERVL 60 189 -334 310 159 72 0 chr18 11609140 11609209 -74379725 - L1MA9 LINE L1 -32 6280 6207 2226 127 3 0 chr18 11609306 11609606 -74379328 - AluSx SINE Alu -11 301 1 44783 41 2 2 chr18 11610311 11616463 -74372471 - L1PA4 LINE L1 -5 6150 2 917 266 119 35 chr18 11616558 11616961 -74371973 + HAL1 LINE L1 47 483 -2024 459 188 55 66 chr18 11617062 11617238 -74371696 - L1M LINE L1 -735 5427 5246 428 252 57 50 chr18 11617301 11617482 -74371452 - L1M4 LINE L1 -1074 5072 4890 2222 129 0 3 chr18 11617872 11618183 -74370751 + AluSq SINE Alu 2 311 -2 25 31 0 0 chr18 11618238 11618270 -74370664 + AT_rich Low_complexity Low_complexity 1 32 0 1730 313 92 37 chr18 11618624 11618761 -74370173 - ERVL LTR ERVL -1845 3919 3791 233 29 29 0 chr18 11618761 11618795 -74370139 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2280 84 0 11 chr18 11618800 11619087 -74369847 - AluY SINE Alu -27 284 1 1730 313 92 37 chr18 11619087 11619692 -74369242 - ERVL LTR ERVL -1976 3788 3218 1877 171 0 3 chr18 11619692 11619991 -74368943 + AluJb SINE Alu 1 298 -14 1730 313 92 37 chr18 11619991 11620746 -74368188 - ERVL LTR ERVL -2546 3218 2297 239 200 0 17 chr18 11621783 11621843 -74367091 + GA-rich Low_complexity Low_complexity 4 62 0 33 43 0 0 chr18 11622665 11622712 -74366222 + AT_rich Low_complexity Low_complexity 1 47 0 1732 192 13 0 chr18 11622808 11623110 -74365824 + AluJo SINE Alu 1 306 -6 1895 135 53 0 chr18 11624711 11624992 -74363942 - AluSq SINE Alu -17 296 1 2132 108 7 3 chr18 11625037 11625332 -74363602 - AluSx SINE Alu -16 296 1 2105 164 51 0 chr18 11626172 11626543 -74362391 - MLT1B LTR MaLR 0 390 1 9384 221 29 36 chr18 11627119 11628217 -74360717 + L1M4 LINE L1 2614 3719 -2427 1892 115 89 0 chr18 11628217 11628486 -74360448 + AluSx SINE Alu 1 293 -19 9384 221 29 36 chr18 11628486 11628718 -74360216 + L1M4 LINE L1 3719 3951 -2195 1001 126 68 34 chr18 11628718 11628925 -74360009 + L1MA8 LINE L1 6072 6285 -6 9384 221 29 36 chr18 11628925 11630171 -74358763 + L1M4 LINE L1 3951 5172 -974 2087 108 35 0 chr18 11630275 11630561 -74358373 - AluSx SINE Alu -16 296 1 1439 140 136 28 chr18 11630674 11630962 -74357972 + L1MC1 LINE L1 6013 6323 -10 228 240 0 0 chr18 11630962 11631012 -74357922 + PABL_B LTR ERV1 1 50 -617 287 203 0 0 chr18 11631286 11631350 -74357584 + L1M4 LINE L1 3856 3919 -2227 799 141 26 26 chr18 11631540 11631696 -74357238 + PABL_B LTR ERV1 512 667 0 2360 101 0 10 chr18 11631719 11632025 -74356909 + AluSq SINE Alu 1 303 -10 1458 221 40 37 chr18 11632558 11632934 -74356000 - MLT1C LTR MaLR -84 383 7 1686 161 0 0 chr18 11633323 11633578 -74355356 - AluJb SINE Alu -20 292 38 1868 153 19 10 chr18 11633597 11633904 -74355030 - AluSx SINE Alu -2 310 1 192 109 0 87 chr18 11634490 11634536 -74354398 + MIR SINE MIR 102 143 -119 1966 143 0 16 chr18 11634713 11635028 -74353906 + AluSx SINE Alu 1 310 -2 3474 132 58 14 chr18 11635259 11635841 -74353093 + MER4B LTR ERV1 3 610 0 191 268 0 0 chr18 11637601 11637642 -74351292 - L2 LINE L2 -5 3308 3268 8341 68 11 11 chr18 11642526 11643597 -74345337 + MER11C LTR ERVK 1 1071 0 1374 133 22 4 chr18 11644068 11644293 -74344641 + L1PA15 LINE L1 5937 6165 0 197 250 0 0 chr18 11645179 11645227 -74343707 + L2 LINE L2 3206 3253 -19 351 0 0 0 chr18 11645741 11645780 -74343154 + (A)n Simple_repeat Simple_repeat 1 39 0 281 215 0 31 chr18 11646805 11646870 -74342064 + L2 LINE L2 3202 3264 -8 823 118 0 44 chr18 11647765 11647901 -74341033 + FLAM_C SINE Alu 1 130 -3 339 25 0 0 chr18 11648073 11648113 -74340821 + (CA)n Simple_repeat Simple_repeat 2 41 0 186 43 0 0 chr18 11648593 11648616 -74340318 + (CTA)n Simple_repeat Simple_repeat 1 23 0 206 154 103 0 chr18 11648619 11648658 -74340276 - MIR SINE MIR -7 255 213 2512 80 0 0 chr18 11649000 11649311 -74339623 + AluY SINE Alu 1 311 0 574 249 101 34 chr18 11649663 11649711 -74339223 - L1M4 LINE L1 -779 5367 5324 1837 147 0 44 chr18 11649711 11650004 -74338930 - AluSx SINE Alu -32 280 1 574 249 101 34 chr18 11650004 11650252 -74338682 - L1M4 LINE L1 -822 5324 5051 857 124 0 0 chr18 11650256 11650369 -74338565 + AluJb SINE Alu 5 117 -195 549 202 64 49 chr18 11650383 11650586 -74338348 - L1M4 LINE L1 -1082 5064 4859 1029 263 64 29 chr18 11650672 11651305 -74337629 + L1MDa LINE L1 176 864 -5676 398 308 13 25 chr18 11651433 11651592 -74337342 - MER5A DNA MER1_type -29 160 4 381 304 98 36 chr18 11652038 11652695 -74336239 + L1MDa LINE L1 1289 2063 -838 335 341 0 8 chr18 11653046 11653178 -74335756 - LTR16C LTR ERVL -8 483 353 248 298 0 29 chr18 11654342 11654446 -74334488 + T-rich Low_complexity Low_complexity 2 102 0 199 167 0 0 chr18 11654658 11654694 -74334240 - L2 LINE L2 0 3313 3278 269 91 159 0 chr18 11655055 11655099 -74333835 - Alu SINE Alu -248 51 1 1981 223 22 46 chr18 11655099 11655690 -74333244 - L1MDa LINE L1 -870 6236 5660 2511 224 49 48 chr18 11655692 11656501 -74332433 - L1M4 LINE L1 -1600 5506 4697 265 167 167 20 chr18 11658096 11658198 -74330736 - L1M4 LINE L1 -2849 4257 4141 * 2092 228 41 55 chr18 11658179 11659069 -74329865 - L1M4 LINE L1 -4684 2353 1455 1473 240 98 7 chr18 11659219 11659669 -74329265 - L1MDa LINE L1 -2085 5021 4531 3002 204 100 22 chr18 11659686 11660626 -74328308 - L1MDa LINE L1 -4161 2945 1933 553 173 0 9 chr18 11660622 11660732 -74328202 - L1MDa LINE L1 -5437 1669 1561 * 2060 97 21 4 chr18 11661006 11661309 -74327625 - AluSx SINE Alu 0 308 1 2430 191 36 17 chr18 11662755 11663288 -74325646 - L1MB2 LINE L1 -36 6135 5593 * 4890 175 36 10 chr18 11663286 11664204 -74324730 - L1MC1 LINE L1 -13 6320 5379 349 240 0 58 chr18 11664463 11664567 -74324367 + MER5A DNA MER1_type 9 106 -83 2440 50 10 0 chr18 11664603 11664903 -74324031 + AluY SINE Alu 1 303 -8 887 338 167 51 chr18 11665250 11666528 -74322406 - L1MEc LINE L1 -4850 1546 121 996 206 136 26 chr18 11666672 11667046 -74321888 - L1ME3A LINE L1 -46 6118 5727 446 307 123 22 chr18 11667164 11667380 -74321554 + L1 LINE L1 3985 4178 -1968 7770 130 25 16 chr18 11667380 11668599 -74320335 + Tigger3b DNA MER2_type 2 1231 0 446 307 123 22 chr18 11668599 11668770 -74320164 + L1 LINE L1 4178 4415 -1731 249 191 48 0 chr18 11668770 11668833 -74320101 + MLT1I LTR MaLR 324 389 -20 2634 148 31 17 chr18 11669179 11669599 -74319335 - MSTB LTR MaLR 0 426 1 250 235 69 78 chr18 11669618 11669720 -74319214 + L2 LINE L2 3170 3270 -2 6453 215 34 36 chr18 11669925 11672987 -74315947 - L1MC1 LINE L1 -4 6329 3347 2271 99 0 0 chr18 11672987 11673294 -74315640 - AluSp SINE Alu 0 307 1 6453 215 34 36 chr18 11673294 11673412 -74315522 - L1MC1 LINE L1 -2986 3347 3230 1470 227 54 37 chr18 11673422 11673816 -74315118 - L1MC1 LINE L1 -3500 2646 2241 2680 26 3 10 chr18 11673816 11674126 -74314808 - AluY SINE Alu -3 308 1 1470 227 54 37 chr18 11674126 11674194 -74314740 - L1MC1 LINE L1 -3905 2241 2176 2000 102 7 14 chr18 11674298 11674581 -74314353 - AluSc SINE Alu -28 281 1 483 259 5 10 chr18 11674582 11674775 -74314159 - L1 LINE L1 -1675 4471 4280 1873 135 53 0 chr18 11676362 11676643 -74312291 - AluSq SINE Alu -17 296 1 2113 108 7 3 chr18 11676688 11676983 -74311951 - AluSx SINE Alu -16 296 1 2218 164 51 0 chr18 11677823 11678194 -74310740 - MLT1B LTR MaLR 0 390 1 9528 221 29 36 chr18 11678770 11679868 -74309066 + L1M4 LINE L1 2614 3719 -2427 1875 115 89 0 chr18 11679868 11680137 -74308797 + AluSx SINE Alu 1 293 -19 9528 221 29 36 chr18 11680137 11680369 -74308565 + L1M4 LINE L1 3719 3951 -2195 1047 126 68 34 chr18 11680369 11680576 -74308358 + L1MA8 LINE L1 6072 6285 -6 9528 221 29 36 chr18 11680576 11681823 -74307111 + L1M4 LINE L1 3951 5172 -974 2046 112 35 0 chr18 11681927 11682213 -74306721 - AluSx SINE Alu -16 296 1 1483 146 135 24 chr18 11682326 11682616 -74306318 + L1MC1 LINE L1 6013 6326 -7 290 203 0 0 chr18 11682937 11683001 -74305933 + L1M4 LINE L1 3856 3919 -2227 797 141 26 26 chr18 11683191 11683347 -74305587 + PABL_B LTR ERV1 512 667 0 2344 101 0 10 chr18 11683370 11683676 -74305258 + AluSq SINE Alu 1 303 -10 1443 221 40 37 chr18 11684209 11684585 -74304349 - MLT1C LTR MaLR -84 383 7 1669 161 0 0 chr18 11684974 11685229 -74303705 - AluJb SINE Alu -20 292 38 2210 84 47 0 chr18 11685248 11685544 -74303390 - AluSp SINE Alu -1 312 3 2645 273 116 13 chr18 11685743 11685864 -74303070 + MER69B DNA AcHobo 6 113 -2413 2015 117 37 7 chr18 11685864 11686336 -74302598 + AluSx SINE Alu 1 481 0 234 0 0 0 chr18 11686335 11686361 -74302573 + (GGAA)n Simple_repeat Simple_repeat 3 28 0 2645 273 116 13 chr18 11686336 11687136 -74301798 + MER69B DNA AcHobo 113 995 -231 1055 111 0 0 chr18 11687136 11687271 -74301663 + AluSq/x SINE Alu 1 135 -177 1988 148 7 0 chr18 11687271 11687568 -74301366 + AluSq SINE Alu 1 299 -14 265 257 104 28 chr18 11687568 11687623 -74301311 + MER69B DNA AcHobo 985 1034 -1492 2369 65 4 0 chr18 11687623 11687900 -74301034 + AluY SINE Alu 10 287 -24 231 36 0 0 chr18 11687900 11687928 -74301006 + (TA)n Simple_repeat Simple_repeat 2 29 0 265 257 104 28 chr18 11687928 11688015 -74300919 + MER69B DNA AcHobo 1033 1139 -87 1691 228 49 15 chr18 11688015 11688405 -74300529 + LTR40a LTR ERVL 1 403 -116 698 176 66 0 chr18 11688431 11688581 -74300353 + LTR40b LTR ERVL 308 462 0 440 214 11 0 chr18 11688581 11688669 -74300265 + MER69B DNA AcHobo 1135 1223 -3 544 329 72 17 chr18 11688979 11689271 -74299663 - MLT1L LTR MaLR 0 615 308 2014 157 0 6 chr18 11689310 11689622 -74299312 - AluJo SINE Alu -1 311 2 23 0 0 0 chr18 11689629 11689652 -74299282 + AT_rich Low_complexity Low_complexity 1 23 0 1097 199 11 88 chr18 11689653 11689925 -74299009 - AluJb SINE Alu -27 285 35 669 242 37 77 chr18 11689929 11690227 -74298707 - MLT1L LTR MaLR -326 289 4 2098 166 47 27 chr18 11690484 11690688 -74298246 + Tigger6a DNA MER2_type 3 201 -1396 1818 174 73 49 chr18 11690688 11691073 -74297861 - LTR52 LTR ERVL -3 418 21 2071 131 0 3 chr18 11691073 11691364 -74297570 + AluSg SINE Alu 1 290 -20 1818 174 73 49 chr18 11691364 11691386 -74297548 - LTR52 LTR ERVL -400 21 1 2098 166 47 27 chr18 11691386 11691584 -74297350 + Tigger6a DNA MER2_type 201 413 -1184 1956 260 61 46 chr18 11691781 11692135 -74296799 + L1MEc LINE L1 1254 1601 -4795 1893 151 4 0 chr18 11692135 11692413 -74296521 + AluJb SINE Alu 1 279 -33 342 67 0 0 chr18 11692418 11692463 -74296471 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 1956 260 61 46 chr18 11692463 11692901 -74296033 + L1MEc LINE L1 1604 2064 -4332 454 209 33 22 chr18 11692901 11692992 -74295942 + Charlie1 DNA MER1_type 1 92 -2669 1906 180 14 49 chr18 11692995 11693287 -74295647 + Tigger6a DNA MER2_type 398 699 -898 2289 114 0 0 chr18 11693287 11693594 -74295340 + AluSx SINE Alu 1 307 -5 1906 180 14 49 chr18 11693594 11693677 -74295257 + Tigger6a DNA MER2_type 699 759 -838 1968 167 0 0 chr18 11693677 11693983 -74294951 + AluJb SINE Alu 1 306 -6 1906 180 14 49 chr18 11693983 11694034 -74294900 + Tigger6a DNA MER2_type 759 810 -273 838 167 0 23 chr18 11694035 11694167 -74294767 - FLAM_C SINE Alu -13 130 2 1165 222 17 14 chr18 11694168 11694456 -74294478 + Tigger6a DNA MER2_type 795 1083 0 203 356 84 4 chr18 11694458 11694683 -74294251 + L2 LINE L2 1941 2183 -1131 2246 129 36 39 chr18 11694716 11695080 -74293854 - THE1B LTR MaLR -1 363 1 306 242 15 0 chr18 11695312 11695378 -74293556 - L2 LINE L2 0 3313 3247 1466 121 12 31 chr18 11695397 11695483 -74293451 + Tigger7 DNA MER2_type 2232 2318 -173 2485 142 36 48 chr18 11695483 11695823 -74293111 - Tigger2a DNA MER2_type -2275 433 98 204 40 0 0 chr18 11695823 11695848 -74293086 + (GGA)n Simple_repeat Simple_repeat 2 26 0 2485 142 36 48 chr18 11695848 11695945 -74292989 - Tigger2a DNA MER2_type -2610 98 1 1466 121 12 31 chr18 11695945 11696114 -74292820 + Tigger7 DNA MER2_type 2318 2482 -9 1565 177 6 40 chr18 11696578 11696925 -74292009 + AluJo SINE Alu 1 336 0 36 82 0 0 chr18 11698076 11698161 -74290773 + GC_rich Low_complexity Low_complexity 1 85 0 195 42 0 0 chr18 11698235 11698259 -74290675 + (CGG)n Simple_repeat Simple_repeat 1 24 0 302 290 143 60 chr18 11698281 11698595 -74290339 - L1M2 LINE L1 -5612 1237 898 344 274 0 32 chr18 11700789 11700884 -74288050 - L2 LINE L2 -5 3267 3176 1788 156 54 0 chr18 11701409 11701704 -74287230 - AluJo SINE Alu -1 311 1 354 248 77 51 chr18 11702453 11702570 -74286364 + MIR SINE MIR 1 121 -87 360 43 0 0 chr18 11702575 11702621 -74286313 + (TAG)n Simple_repeat Simple_repeat 1 46 0 310 226 21 54 chr18 11702680 11702773 -74286161 - MIR SINE MIR -113 149 60 195 42 0 0 chr18 11703255 11703279 -74285655 + (A)n Simple_repeat Simple_repeat 1 24 0 2314 106 0 3 chr18 11703322 11703633 -74285301 - AluSg SINE Alu 0 310 1 189 0 0 0 chr18 11705129 11705150 -74283784 + (A)n Simple_repeat Simple_repeat 1 21 0 1449 122 0 36 chr18 11705469 11705691 -74283243 + AluJb SINE Alu 82 295 -17 583 292 56 26 chr18 11706481 11706714 -74282220 + MIR SINE MIR 1 240 -22 2345 97 0 10 chr18 11707252 11707560 -74281374 - AluY SINE Alu -6 305 1 292 268 20 65 chr18 11708385 11708538 -74280396 + MIR SINE MIR 49 194 -68 1361 167 68 16 chr18 11708616 11708867 -74280067 + AluJo SINE Alu 6 269 -43 285 98 0 0 chr18 11708868 11708909 -74280025 + (T)n Simple_repeat Simple_repeat 1 41 0 197 250 0 0 chr18 11709424 11709472 -74279462 - L2 LINE L2 -19 3253 3206 1374 133 22 4 chr18 11710358 11710583 -74278351 - L1PA15 LINE L1 0 6165 5937 8341 68 11 11 chr18 11711055 11712126 -74276808 - MER11C LTR ERVK 0 1071 1 191 268 0 0 chr18 11717010 11717051 -74271883 + L2 LINE L2 3268 3308 -5 3474 132 58 14 chr18 11718812 11719394 -74269540 - MER4B LTR ERV1 0 610 3 2036 144 0 10 chr18 11719625 11719938 -74268996 - AluSx SINE Alu -2 310 1 192 109 0 87 chr18 11720117 11720163 -74268771 - MIR SINE MIR -119 143 102 2181 109 17 13 chr18 11720749 11721051 -74267883 + AluSx SINE Alu 1 303 -9 825 145 0 0 chr18 11722906 11723023 -74265911 + FLAM_C SINE Alu 1 117 -16 180 0 0 0 chr18 11723032 11723052 -74265882 + (T)n Simple_repeat Simple_repeat 1 20 0 278 148 12 49 chr18 11723687 11723768 -74265166 - L1ME4a LINE L1 -1 6120 6043 22 35 0 0 chr18 11724432 11724461 -74264473 + AT_rich Low_complexity Low_complexity 1 29 0 1709 144 16 64 chr18 11725731 11726044 -74262890 + AluJo SINE Alu 1 298 -14 25 31 0 0 chr18 11726112 11726144 -74262790 + AT_rich Low_complexity Low_complexity 1 32 0 22 56 0 0 chr18 11726313 11726349 -74262585 + AT_rich Low_complexity Low_complexity 1 36 0 2463 111 92 10 chr18 11726361 11726678 -74262256 - Tigger2 DNA MER2_type 0 2718 2362 198 0 0 0 chr18 11726678 11726700 -74262234 + (GGA)n Simple_repeat Simple_repeat 2 23 0 2463 111 92 10 chr18 11726700 11726771 -74262163 - Tigger2 DNA MER2_type -356 2362 2298 366 172 47 0 chr18 11726780 11726844 -74262090 - Tigger2 DNA MER2_type -2651 67 1 339 25 0 0 chr18 11727896 11727936 -74260998 + (T)n Simple_repeat Simple_repeat 1 40 0 2376 200 62 9 chr18 11728239 11728770 -74260164 + L1MB3 LINE L1 5563 6121 -62 446 239 168 6 chr18 11728848 11729015 -74259919 + LTR50 LTR ERVL 3 196 -599 301 175 117 33 chr18 11729243 11729363 -74259571 + LTR50 LTR ERVL 502 631 -164 242 180 33 16 chr18 11729391 11729452 -74259482 + LTR33A LTR ERVL 446 507 -16 2196 92 7 0 chr18 11729737 11730010 -74258924 - AluSq SINE Alu -36 277 3 1725 143 49 3 chr18 11730259 11730546 -74258388 - AluSq SINE Alu -13 300 1 219 36 0 0 chr18 11730581 11730609 -74258325 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1656 136 59 7 chr18 11730613 11730885 -74258049 - AluJb SINE Alu -26 286 1 399 283 96 51 chr18 11731792 11732085 -74256849 + L2 LINE L2 2213 2518 -796 300 269 29 19 chr18 11732385 11732489 -74256445 - MIR SINE MIR -82 126 22 1874 139 13 26 chr18 11732722 11733025 -74255909 - AluJb SINE Alu -13 299 1 2801 237 78 34 chr18 11733028 11733125 -74255809 + L1M4 LINE L1 2110 2201 -3945 2296 103 3 0 chr18 11733125 11733427 -74255507 - AluSg SINE Alu -7 303 1 2801 237 78 34 chr18 11733427 11734148 -74254786 + L1M4 LINE L1 2201 2986 -3160 1665 101 5 0 chr18 11734148 11734366 -74254568 + AluSq SINE Alu 83 301 -12 2801 237 78 34 chr18 11734366 11734587 -74254347 + L1M4 LINE L1 2986 3196 -2950 2844 150 35 35 chr18 11734594 11735141 -74253793 + L1MB3 LINE L1 5285 5831 -352 22 0 0 0 chr18 11735150 11735172 -74253762 + AT_rich Low_complexity Low_complexity 1 22 0 13594 100 10 73 chr18 11735173 11737670 -74251264 + L1PA7 LINE L1 1 2655 -3806 2218 115 3 3 chr18 11737670 11737966 -74250968 + AluSx SINE Alu 1 296 -16 13594 100 10 73 chr18 11737966 11738064 -74250870 + L1PA7 LINE L1 2655 2758 -3703 270 79 0 0 chr18 11738064 11738102 -74250832 + AluSp/q SINE Alu 256 293 -10 13594 100 10 73 chr18 11738102 11738503 -74250431 + L1PA7 LINE L1 2758 2897 -3564 11081 78 5 5 chr18 11738504 11740770 -74248164 + L1PA7 LINE L1 4174 6463 -6 35 41 0 0 chr18 11740770 11740819 -74248115 + AT_rich Low_complexity Low_complexity 1 49 0 697 159 18 0 chr18 11740842 11740981 -74247953 - FLAM_C SINE Alu 0 142 2 333 254 44 81 chr18 11740982 11741101 -74247833 + L1M4 LINE L1 3215 3322 -2824 2058 109 36 0 chr18 11741101 11741376 -74247558 + AluSc SINE Alu 1 285 -24 333 254 44 81 chr18 11741376 11741504 -74247430 + L1M4 LINE L1 3322 3453 -2693 1217 245 123 20 chr18 11741506 11741995 -74246939 + L1M4 LINE L1 3978 4516 -1630 1577 208 79 37 chr18 11741997 11742183 -74246751 + L1M4 LINE L1 4589 4766 -1380 620 176 65 0 chr18 11742183 11742361 -74246573 + FLAM_A SINE Alu 1 185 0 1577 208 79 37 chr18 11742361 11742628 -74246306 + L1M4 LINE L1 4766 5064 -1082 2069 136 7 0 chr18 11744060 11744368 -74244566 + AluSx SINE Alu 1 310 -2 307 143 16 16 chr18 11744879 11744942 -74243992 - L1ME3A LINE L1 -14 6156 6094 518 261 19 0 chr18 11745010 11745167 -74243767 - L1ME3A LINE L1 -203 5967 5808 1668 125 47 8 chr18 11745381 11745637 -74243297 + AluSx SINE Alu 37 302 -10 1951 148 10 23 chr18 11747089 11747393 -74241541 + AluJb SINE Alu 5 304 -8 29 28 0 0 chr18 11749155 11749191 -74239743 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr18 11749308 11749329 -74239605 + AT_rich Low_complexity Low_complexity 1 21 0 1334 151 5 9 chr18 11749382 11749600 -74239334 + AluJo SINE Alu 87 303 -9 184 278 19 0 chr18 11750019 11750073 -74238861 + L2 LINE L2 3136 3190 -82 299 161 0 16 chr18 11750105 11750167 -74238767 + GA-rich Low_complexity Low_complexity 4 64 0 207 357 32 19 chr18 11751447 11751601 -74237333 - MIR SINE MIR -38 224 69 432 0 0 0 chr18 11752792 11752840 -74236094 + (TG)n Simple_repeat Simple_repeat 2 49 0 593 197 150 16 chr18 11753160 11753353 -74235581 + L1MB8 LINE L1 4947 5165 -981 477 94 16 0 chr18 11753357 11753421 -74235513 + AluJo SINE Alu 72 136 -176 1862 153 37 27 chr18 11753421 11753854 -74235080 + L1MB8 LINE L1 5159 5592 -586 3717 113 70 25 chr18 11753854 11754454 -74234480 - MER51A LTR ERV1 0 634 8 1105 188 38 114 chr18 11754458 11754699 -74234235 + L1MB8 LINE L1 5589 5794 -384 2470 90 0 3 chr18 11754699 11755009 -74233925 + AluSx SINE Alu 1 309 -3 1105 188 38 114 chr18 11755009 11755134 -74233800 + L1MB8 LINE L1 5794 5927 -251 186 262 53 96 chr18 11755163 11755350 -74233584 + L2 LINE L2 2816 2994 -278 2374 178 18 18 chr18 11755651 11756096 -74232838 - MER65A LTR ERV1 0 445 1 5274 210 70 44 chr18 11756097 11756159 -74232775 - MER65A-int LTR ERV1 -1 4870 4811 712 219 0 8 chr18 11756159 11756287 -74232647 - FLAM_A SINE Alu -5 128 2 5274 210 70 44 chr18 11756287 11756872 -74232062 - MER65A-int LTR ERV1 -60 4811 4243 2082 122 7 0 chr18 11756872 11757166 -74231768 - AluSq SINE Alu -17 296 1 5274 210 70 44 chr18 11757166 11757753 -74231181 - MER65A-int LTR ERV1 -628 4243 3603 1773 179 62 16 chr18 11757762 11758306 -74230628 - MER4-int LTR ERV1 -846 5393 2945 841 207 0 47 chr18 11758298 11758530 -74230404 - MER4-int LTR ERV1 -2648 3950 3730 * 342 140 0 0 chr18 11758610 11758660 -74230274 - MER4-int LTR ERV1 -2868 3730 3681 2208 98 29 13 chr18 11758670 11758977 -74229957 + AluSx SINE Alu 1 312 0 1479 204 41 57 chr18 11759090 11759562 -74229372 - L1ME LINE L1 -502 5664 5204 4403 114 23 0 chr18 11759575 11760191 -74228743 - L1PB2 LINE L1 0 6151 5522 736 110 0 0 chr18 11760311 11760411 -74228523 + AluSg/x SINE Alu 205 304 -5 1541 209 84 44 chr18 11760519 11760949 -74227985 - MLT1D LTR MaLR -11 608 76 2071 125 54 41 chr18 11760949 11761317 -74227617 - THE1C LTR MaLR 0 375 3 1541 209 84 44 chr18 11761317 11761397 -74227537 - MLT1D LTR MaLR -543 76 1 244 164 91 0 chr18 11762571 11762626 -74226308 - MER3 DNA MER1_type -15 194 135 569 236 76 0 chr18 11762638 11762795 -74226139 - MER3 DNA MER1_type -86 123 2 293 113 113 19 chr18 11762908 11762961 -74225973 - MER58B DNA MER1_type -8 333 276 316 193 0 0 chr18 11762985 11763042 -74225892 - MER58B DNA MER1_type -34 307 251 276 291 126 29 chr18 11763899 11764002 -74224932 - MIR SINE MIR -116 146 34 2002 94 0 14 chr18 11765251 11765527 -74223407 + AluY SINE Alu 39 310 -1 236 293 24 12 chr18 11765629 11765711 -74223223 + MIR3 SINE MIR 106 188 -20 252 260 220 13 chr18 11765894 11766044 -74222890 - MIR SINE MIR -11 251 71 267 342 105 0 chr18 11767158 11767272 -74221662 - L2 LINE L2 -1 3271 3146 1394 219 100 61 chr18 11767486 11767948 -74220986 + L1MCb LINE L1 3 482 -5563 780 217 13 0 chr18 11768307 11768464 -74220470 - MER5A DNA MER1_type -1 188 30 21 0 0 0 chr18 11768614 11768635 -74220299 + AT_rich Low_complexity Low_complexity 1 21 0 1683 193 0 13 chr18 11768887 11769188 -74219746 - AluJb SINE Alu -15 297 1 2111 153 97 0 chr18 11769353 11769713 -74219221 + MSTA LTR MaLR 34 428 0 282 280 0 13 chr18 11769927 11770002 -74218932 - MER5A DNA MER1_type -109 80 7 393 388 8 0 chr18 11770036 11770165 -74218769 - L2 LINE L2 0 3272 3143 334 250 0 0 chr18 11770519 11770595 -74218339 + MIR SINE MIR 40 115 -147 583 146 11 0 chr18 11770599 11770688 -74218246 - MER4B LTR ERV1 0 610 521 276 327 157 13 chr18 11771544 11771703 -74217231 - L2 LINE L2 -5 3267 3086 747 199 82 41 chr18 11771843 11772039 -74216895 + MER3 DNA MER1_type 6 209 0 409 322 26 13 chr18 11772408 11772560 -74216374 + MIR3 SINE MIR 3 156 -52 3782 226 58 5 chr18 11773150 11774086 -74214848 + L1PBa LINE L1 62 1046 -5817 3373 167 32 5 chr18 11774089 11774778 -74214156 + L1PBa LINE L1 1093 1942 -4921 294 293 9 38 chr18 11774878 11774984 -74213950 - MIR SINE MIR -84 124 22 254 357 58 58 chr18 11775125 11775450 -74213484 + L2 LINE L2 2948 3272 0 2466 60 3 3 chr18 11776616 11776917 -74212017 - AluY SINE Alu -10 301 1 597 224 16 0 chr18 11777485 11777610 -74211324 - MLT1B LTR MaLR -263 127 1 234 319 147 12 chr18 11777701 11777864 -74211070 + MIR SINE MIR 22 206 -56 499 281 76 23 chr18 11778328 11778499 -74210435 - MIR3 SINE MIR -24 184 5 450 277 42 47 chr18 11778868 11779081 -74209853 + MIR SINE MIR 40 251 -11 425 119 0 0 chr18 11779225 11779284 -74209650 - L1P4 LINE L1 -453 5712 5654 2049 316 37 31 chr18 11779285 11780088 -74208846 + ERVL LTR ERVL 2944 3751 -2013 417 395 14 25 chr18 11780095 11780381 -74208553 + L3 LINE CR1 987 1269 -308 297 260 14 96 chr18 11780387 11780577 -74208357 + MIR SINE MIR 40 212 -50 299 161 0 16 chr18 11780852 11780914 -74208020 + GA-rich Low_complexity Low_complexity 4 64 0 240 331 45 32 chr18 11782194 11782348 -74206586 - MIR SINE MIR -38 224 69 468 0 0 0 chr18 11783549 11783601 -74205333 + (TG)n Simple_repeat Simple_repeat 2 53 0 612 183 161 11 chr18 11783934 11784114 -74204820 + L1MB8 LINE L1 4959 5165 -981 477 94 16 0 chr18 11784118 11784182 -74204752 + AluJo SINE Alu 72 136 -176 2871 162 37 64 chr18 11784182 11784615 -74204319 + L1MB8 LINE L1 5159 5602 -576 3933 111 75 25 chr18 11784615 11785219 -74203715 - MER51A LTR ERV1 0 634 1 2871 162 37 64 chr18 11785219 11785460 -74203474 + L1MB8 LINE L1 5602 5799 -379 2505 91 0 0 chr18 11785460 11785769 -74203165 + AluSx SINE Alu 1 309 -3 2871 162 37 64 chr18 11785769 11785895 -74203039 + L1MB8 LINE L1 5799 5927 -251 2374 178 18 18 chr18 11786412 11786857 -74202077 - MER65A LTR ERV1 0 445 1 5307 209 70 44 chr18 11786858 11786920 -74202014 - MER65A-int LTR ERV1 -1 4870 4811 743 203 0 8 chr18 11786920 11787048 -74201886 - FLAM_A SINE Alu -5 128 2 5307 209 70 44 chr18 11787048 11787633 -74201301 - MER65A-int LTR ERV1 -60 4811 4243 2068 126 7 0 chr18 11787633 11787927 -74201007 - AluSq SINE Alu -17 296 1 5307 209 70 44 chr18 11787927 11788514 -74200420 - MER65A-int LTR ERV1 -628 4243 3603 1760 178 62 16 chr18 11788523 11789067 -74199867 - MER65A-int LTR ERV1 -846 5393 2945 1559 198 89 102 chr18 11789059 11789431 -74199503 - MER65A-int LTR ERV1 -2648 3950 3575 * 2144 102 30 3 chr18 11789431 11789726 -74199208 + AluSx SINE Alu 1 303 -9 1559 198 89 102 chr18 11789726 11789955 -74198979 - MER65A-int LTR ERV1 -3023 3575 3345 1877 181 3 0 chr18 11789955 11790264 -74198670 + AluSx SINE Alu 1 310 -2 1559 198 89 102 chr18 11790264 11790873 -74198061 - MER65A-int LTR ERV1 -3253 3345 1554 9125 203 79 41 chr18 11790981 11792801 -74196133 - MER65A-int LTR ERV1 -2377 2494 570 658 234 0 0 chr18 11792801 11792929 -74196005 + FLAM_A SINE Alu 1 128 -5 9125 203 79 41 chr18 11792929 11793511 -74195423 - MER65A-int LTR ERV1 -4301 570 11 2786 140 9 20 chr18 11793516 11793966 -74194968 - MER65A LTR ERV1 0 445 1 461 162 27 81 chr18 11794082 11794193 -74194741 - MIR SINE MIR -98 164 60 506 156 7 20 chr18 11794249 11794348 -74194586 + L1MB1 LINE L1 6075 6171 -30 208 175 25 0 chr18 11794349 11794389 -74194545 + A-rich Low_complexity Low_complexity 1 41 0 426 177 25 0 chr18 11794390 11794469 -74194465 + L1MA10 LINE L1 6169 6249 -85 2192 118 10 0 chr18 11794788 11795094 -74193840 - AluSx SINE Alu -1 311 3 340 301 112 28 chr18 11795388 11795531 -74193403 - MER5B DNA MER1_type -10 168 14 237 185 37 74 chr18 11796389 11796470 -74192464 + L1ME3A LINE L1 5523 5600 -570 2224 126 0 0 chr18 11796506 11796808 -74192126 - AluSx SINE Alu -10 302 1 1286 230 152 18 chr18 11796846 11797271 -74191663 + L1ME3A LINE L1 5694 6166 -4 262 238 77 60 chr18 11797535 11797703 -74191231 - LTR40a LTR ERVL -163 356 128 23 0 0 0 chr18 11797754 11797777 -74191157 + AT_rich Low_complexity Low_complexity 1 23 0 2204 117 0 3 chr18 11797778 11798085 -74190849 + AluSx SINE Alu 1 306 -6 1703 187 7 10 chr18 11798922 11799232 -74189702 - AluJo SINE Alu -3 309 1 736 234 132 0 chr18 11799397 11799564 -74189370 + MER5A DNA MER1_type 1 189 0 2209 105 3 13 chr18 11800112 11800427 -74188507 + AluSx SINE Alu 1 312 0 1796 188 0 3 chr18 11800439 11800747 -74188187 - AluJo SINE Alu -2 310 4 1224 176 29 0 chr18 11801130 11801335 -74187599 + AluJo SINE Alu 1 211 -101 234 276 63 63 chr18 11801629 11801756 -74187178 - MER112 DNA MER1_type -105 155 29 2196 99 0 3 chr18 11802763 11803045 -74185889 - AluSq SINE Alu -7 306 26 1767 160 55 0 chr18 11803045 11803357 -74185577 - L1MB5 LINE L1 -17 6157 5829 244 305 100 24 chr18 11803417 11803627 -74185307 - L2 LINE L2 -831 2483 2258 22 0 0 0 chr18 11804381 11804403 -74184531 + AT_rich Low_complexity Low_complexity 1 22 0 2452 106 19 14 chr18 11804409 11804777 -74184157 + Tigger2a DNA MER2_type 1 370 -64 722 165 0 0 chr18 11804784 11804899 -74184035 - FLAM_A SINE Alu -7 135 21 318 222 0 69 chr18 11804901 11804973 -74183961 + Tigger2a DNA MER2_type 378 444 0 268 227 70 137 chr18 11805291 11805679 -74183255 - L2 LINE L2 -29 3284 2923 396 200 20 160 chr18 11806393 11806593 -74182341 - MER58C DNA MER1_type 0 215 44 545 146 0 31 chr18 11807065 11807161 -74181773 + HY4 scRNA scRNA 1 93 0 1666 172 0 24 chr18 11807344 11807634 -74181300 + AluJo SINE Alu 21 303 -9 341 230 60 0 chr18 11809597 11809697 -74179237 + L2 LINE L2 2650 2755 -559 406 292 191 21 chr18 11809781 11810110 -74178824 + L2 LINE L2 2925 3309 -4 207 114 0 0 chr18 11810603 11810638 -74178296 + (A)n Simple_repeat Simple_repeat 1 35 0 207 69 0 0 chr18 11811677 11811706 -74177228 + (TATATG)n Simple_repeat Simple_repeat 2 30 0 2537 69 0 0 chr18 11812098 11812401 -74176533 + AluY SINE Alu 1 303 -8 2272 132 28 8 chr18 11812417 11812774 -74176160 + THE1B LTR MaLR 1 364 0 223 287 138 35 chr18 11812836 11813010 -74175924 - MIR SINE MIR -37 225 34 1012 163 0 19 chr18 11813241 11813401 -74175533 - FRAM SINE Alu -23 153 1 8005 17 0 0 chr18 11815352 11816305 -74172629 + L1PA2 LINE L1 5203 6155 0 258 143 0 0 chr18 11816309 11816358 -74172576 + (A)n Simple_repeat Simple_repeat 1 49 0 216 97 0 0 chr18 11816707 11816738 -74172196 + (A)n Simple_repeat Simple_repeat 1 31 0 2441 93 0 0 chr18 11817048 11817360 -74171574 + AluSx SINE Alu 1 312 0 1730 179 0 7 chr18 11817699 11818006 -74170928 + AluJo SINE Alu 6 310 -2 217 287 37 88 chr18 11818632 11818768 -74170166 + MIR SINE MIR 63 191 -71 197 217 145 72 chr18 11818980 11819063 -74169871 - L2 LINE L2 -41 3272 3184 221 305 56 13 chr18 11821368 11821598 -74167336 - MIR3 SINE MIR -6 256 13 182 268 84 0 chr18 11821615 11821686 -74167248 + MIR SINE MIR 61 137 -125 820 158 0 8 chr18 11823097 11823230 -74165704 - FLAM_A SINE Alu -1 132 1 213 121 0 0 chr18 11823320 11823353 -74165581 + (A)n Simple_repeat Simple_repeat 1 33 0 1819 141 3 40 chr18 11823358 11823656 -74165278 + AluJb SINE Alu 3 289 -23 369 198 0 0 chr18 11823658 11823739 -74165195 + GA-rich Low_complexity Low_complexity 1 81 0 347 282 124 22 chr18 11823889 11824233 -74164701 + LTR33A LTR ERVL 9 410 -113 262 346 10 10 chr18 11824389 11824493 -74164441 + MIR SINE MIR 1 104 -158 285 322 68 8 chr18 11825610 11825728 -74163206 - MER5A DNA MER1_type -1 188 64 1738 174 0 3 chr18 11825763 11826050 -74162884 - AluSx SINE Alu -26 286 1 869 174 7 19 chr18 11826145 11826300 -74162634 - FRAM SINE Alu -6 170 18 695 244 52 81 chr18 11826579 11826754 -74162180 + MER20B DNA MER1_type 1 165 -618 1992 149 3 3 chr18 11826754 11827055 -74161879 + AluSx SINE Alu 1 301 -11 695 244 52 81 chr18 11827055 11827187 -74161747 + MER20B DNA MER1_type 165 299 -484 7538 98 17 19 chr18 11827294 11828838 -74160096 - Harlequin LTR ERV1 -5312 1584 1 1967 178 72 38 chr18 11828838 11829282 -74159652 - LTR2B LTR ERV1 0 490 32 614 133 33 0 chr18 11829289 11829379 -74159555 - AluSg/x SINE Alu -118 192 100 1631 189 24 10 chr18 11829406 11829703 -74159231 + AluJo SINE Alu 1 301 -11 1743 185 0 25 chr18 11831105 11831419 -74157515 - AluJo SINE Alu -6 306 1 1053 150 66 9 chr18 11831963 11832176 -74156758 - MER34B LTR ERV1 -7 558 334 * 2804 180 33 26 chr18 11832169 11832713 -74156221 - MER41B LTR ERV1 -87 548 1 14683 116 12 30 chr18 11832713 11834278 -74154656 - MER41B-int LTR ERV1 0 5946 4437 2233 114 3 3 chr18 11834278 11834577 -74154357 - AluY SINE Alu -12 299 1 14683 116 12 30 chr18 11834577 11835340 -74153594 - MER41B-int LTR ERV1 -1509 4437 3661 2370 114 20 6 chr18 11835345 11835703 -74153231 - L1PB1 LINE L1 -6 6861 6499 244 177 41 34 chr18 11835703 11835850 -74153084 + (TA)n Simple_repeat Simple_repeat 1 148 0 17310 163 33 7 chr18 11835858 11836277 -74152657 - L1PB1 LINE L1 -337 6530 6124 2253 114 0 10 chr18 11836277 11836584 -74152350 - AluSx SINE Alu -8 304 1 17310 163 33 7 chr18 11836584 11836967 -74151967 - L1PB1 LINE L1 -743 6124 5753 2922 0 0 0 chr18 11836967 11837272 -74151662 - AluYa5 SINE Alu -6 305 1 17310 163 33 7 chr18 11837272 11842768 -74146166 - L1PB1 LINE L1 -1114 5753 46 1222 109 0 0 chr18 11842769 11842944 -74145990 - MER41B-int LTR ERV1 -2257 3689 3515 2079 152 42 17 chr18 11842944 11843300 -74145634 - MER34B LTR ERV1 -200 365 1 421 340 91 10 chr18 11843303 11843512 -74145422 + MIR SINE MIR 34 259 -3 287 306 90 0 chr18 11843924 11844035 -74144899 - L2 LINE L2 -4 3268 3148 312 342 68 5 chr18 11844124 11844314 -74144620 - MIR SINE MIR -17 245 44 1850 157 3 20 chr18 11844648 11844974 -74143960 - AluJo SINE Alu 0 312 1 1421 184 23 53 chr18 11845709 11846013 -74142921 - AluJo SINE Alu -17 295 1 794 277 131 46 chr18 11846429 11846940 -74141994 - MLT1H1 LTR MaLR 0 555 6 2260 109 0 0 chr18 11846972 11847266 -74141668 - AluSc SINE Alu -15 294 1 2330 116 135 5 chr18 11847460 11847839 -74141095 - MSTA LTR MaLR 0 428 1 22 35 0 0 chr18 11849179 11849208 -74139726 + AT_rich Low_complexity Low_complexity 1 29 0 2136 158 60 3 chr18 11849392 11849759 -74139175 + MLT1B LTR MaLR 1 388 -2 1212 253 88 56 chr18 11849768 11850125 -74138809 - L1MC4a LINE L1 -743 5403 5059 2020 119 3 53 chr18 11850125 11850444 -74138490 - AluSx SINE Alu -9 303 1 1212 253 88 56 chr18 11850444 11850746 -74138188 - L1MC4a LINE L1 -1087 5059 5263 1772 163 0 11 chr18 11850746 11851028 -74137906 - AluJb SINE Alu -2 310 32 1212 253 88 56 chr18 11851028 11851177 -74137757 - L1MC4a LINE L1 -882 5264 5121 972 242 44 133 chr18 11851282 11851869 -74137065 - MER21B LTR ERV1 -227 636 102 359 238 35 46 chr18 11851837 11851979 -74136955 - MER77 LTR ERV1 -398 207 23 * 1301 156 17 35 chr18 11852154 11852385 -74136549 - AluJo SINE Alu 0 312 86 303 301 14 28 chr18 11852402 11852545 -74136389 - L1MC4a LINE L1 -1219 4927 4787 38 39 0 0 chr18 11852550 11852602 -74136332 + AT_rich Low_complexity Low_complexity 1 52 0 28722 57 2 6 chr18 11853327 11858915 -74130019 + L1PA5 LINE L1 606 6164 0 2186 122 7 0 chr18 11858976 11859271 -74129663 - AluSp SINE Alu -16 297 1 1540 161 18 25 chr18 11859295 11859569 -74129365 + AluJo SINE Alu 37 308 -4 1908 203 101 33 chr18 11859630 11860143 -74128791 + LTR10A LTR ERV1 1 548 -61 491 256 75 6 chr18 11860152 11860312 -74128622 + LTR10A-int LTR ERV1 1 171 -6478 4998 210 41 20 chr18 11860316 11861454 -74127480 + LTR10A-int LTR ERV1 504 1583 -5812 5265 92 26 59 chr18 11861504 11862601 -74126333 + HERV17 LTR ERV1 703 1720 -5176 355 229 169 0 chr18 11862603 11862686 -74126248 - LTR8 LTR ERV1 -438 253 157 18098 103 8 14 chr18 11862714 11865611 -74123323 + Harlequin LTR ERV1 1827 6647 -2 1874 176 158 37 chr18 11865612 11866101 -74122833 + LTR10A LTR ERV1 1 548 -61 191 304 71 62 chr18 11866138 11866250 -74122684 - L2 LINE L2 0 3272 3160 1682 167 173 21 chr18 11866348 11866772 -74122162 - LTR10A LTR ERV1 -62 547 13 504 265 60 24 chr18 11867357 11867523 -74121411 + LTR16A LTR ERVL 180 351 -99 657 47 0 0 chr18 11867537 11867622 -74121312 + (GA)n Simple_repeat Simple_repeat 1 85 0 1686 186 184 60 chr18 11867713 11868262 -74120672 + MLT1E2 LTR MaLR 5 623 -3 631 207 155 93 chr18 11868624 11868788 -74120146 + L1MC5 LINE L1 7494 7646 -315 195 69 0 0 chr18 11868788 11868817 -74120117 + (CA)n Simple_repeat Simple_repeat 2 30 0 631 207 155 93 chr18 11868817 11869072 -74119862 + L1MC5 LINE L1 7646 7939 -22 3832 191 9 12 chr18 11869765 11870570 -74118364 + L1M4 LINE L1 4385 5186 -960 1217 153 5 0 chr18 11870570 11870760 -74118174 + AluJo SINE Alu 119 309 -3 2354 161 41 38 chr18 11870760 11871267 -74117667 + L1M4 LINE L1 5201 5718 -460 1187 221 59 38 chr18 11871269 11871608 -74117326 - MLT1G1 LTR MaLR -178 417 72 272 149 60 15 chr18 11873941 11874008 -74114926 + MLT1E1 LTR MaLR 429 498 -95 474 221 0 0 chr18 11874139 11874245 -74114689 + MLT1E1 LTR MaLR 511 646 -8 1181 136 35 44 chr18 11875262 11875490 -74113444 - L1MB3 LINE L1 -7 6176 5951 502 125 0 34 chr18 11875511 11875599 -74113335 - MLT1A2 LTR MaLR 0 374 290 296 286 129 14 chr18 11876774 11876921 -74112013 - MIR SINE MIR -82 180 17 1872 129 72 67 chr18 11877320 11877708 -74111226 + MLT1B LTR MaLR 1 390 0 305 281 162 0 chr18 11877951 11878119 -74110815 + MIR SINE MIR 3 193 -69 1738 192 13 7 chr18 11878189 11878491 -74110443 + AluJo SINE Alu 1 304 -8 269 0 0 53 chr18 11879138 11879176 -74109758 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 1084 192 58 58 chr18 11879554 11879846 -74109088 + L1ME2 LINE L1 5864 6155 -9 211 306 0 28 chr18 11880116 11880188 -74108746 - L2 LINE L2 -226 3046 2977 1547 108 0 5 chr18 11880347 11880560 -74108374 + AluSg/x SINE Alu 87 298 -14 358 294 170 0 chr18 11880672 11880825 -74108109 + MER5A DNA MER1_type 11 189 0 255 316 61 0 chr18 11881916 11882030 -74106904 + MIR SINE MIR 64 184 -78 314 200 64 55 chr18 11882884 11882994 -74105940 - L2 LINE L2 0 3313 3203 3320 148 19 9 chr18 11883080 11883620 -74105314 + MER7C DNA MER2_type 58 602 0 288 297 20 40 chr18 11883706 11883854 -74105080 + MIR SINE MIR 3 147 -115 245 282 82 0 chr18 11884071 11884181 -74104753 - L1MC4 LINE L1 0 8042 7924 2884 222 78 51 chr18 11884240 11885518 -74103416 - L1ME2 LINE L1 -10 6154 4844 576 306 49 10 chr18 11885514 11885818 -74103116 + L1MEc LINE L1 37 352 -6044 * 1117 225 67 26 chr18 11886026 11886412 -74102522 - L1MCc LINE L1 -5972 451 50 220 154 58 39 chr18 11886432 11886484 -74102450 - L2 LINE L2 -2 3270 3218 204 354 24 24 chr18 11886594 11886758 -74102176 - L2 LINE L2 -195 3077 2914 276 276 78 17 chr18 11886965 11887081 -74101853 + L2 LINE L2 3145 3267 -5 2327 50 68 4 chr18 11887206 11887486 -74101448 - AluY SINE Alu -13 298 1 197 274 153 16 chr18 11888173 11888297 -74100637 - L2 LINE L2 -204 3068 2928 268 155 28 84 chr18 11888921 11888955 -74099979 - MER69 DNA AcHobo -3 2523 2493 2265 173 16 38 chr18 11888955 11889273 -74099661 + MER65A LTR ERV1 3 310 -135 2381 79 0 7 chr18 11889273 11889584 -74099350 + AluSx SINE Alu 1 312 0 2265 173 16 38 chr18 11889584 11889716 -74099218 + MER65A LTR ERV1 310 443 -2 268 155 28 84 chr18 11889716 11889752 -74099182 - MER69 DNA AcHobo -33 2493 2457 533 236 16 16 chr18 11889766 11889893 -74099041 - MER69 DNA AcHobo -2399 127 1 258 347 16 0 chr18 11889893 11890014 -74098920 - L2 LINE L2 -239 3033 2911 644 231 0 0 chr18 11890444 11890565 -74098369 - MER82 DNA MER2_type -532 121 1 21 0 0 0 chr18 11890565 11890586 -74098348 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr18 11890766 11890788 -74098146 + AT_rich Low_complexity Low_complexity 1 22 0 1804 239 27 14 chr18 11892072 11892486 -74096448 + MLT1J LTR MaLR 61 479 -32 200 35 35 0 chr18 11894348 11894377 -74094557 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 291 309 36 0 chr18 11895016 11895126 -74093808 + L2 LINE L2 3197 3310 -3 215 290 168 8 chr18 11895384 11895515 -74093419 + L2 LINE L2 3162 3313 0 337 260 231 43 chr18 11895690 11895898 -74093036 + MIR SINE MIR 15 261 -1 23 0 0 0 chr18 11896412 11896435 -74092499 + AT_rich Low_complexity Low_complexity 1 23 0 1968 145 13 16 chr18 11896442 11896752 -74092182 - AluJo SINE Alu -3 309 1 2594 119 33 42 chr18 11896759 11896817 -74092117 - L1MA8 LINE L1 0 6291 6234 1957 140 7 29 chr18 11896817 11897125 -74091809 - AluJb SINE Alu -11 301 1 2594 119 33 42 chr18 11897125 11897545 -74091389 - L1MA8 LINE L1 -57 6234 5817 244 311 24 1 chr18 11899610 11899704 -74089230 + MIR SINE MIR 51 147 -61 346 313 107 13 chr18 11899748 11899972 -74088962 - MIR SINE MIR 0 262 18 632 196 34 62 chr18 11899987 11900104 -74088830 + MER5B DNA MER1_type 4 116 -62 1709 175 45 3 chr18 11900104 11900390 -74088544 - AluJo SINE Alu -14 298 1 632 196 34 62 chr18 11900390 11900451 -74088483 + MER5B DNA MER1_type 116 177 -1 371 247 156 19 chr18 11900476 11900630 -74088304 - MER5B DNA MER1_type -3 175 1 827 259 161 20 chr18 11901159 11901514 -74087420 - MLT1I LTR MaLR -4 405 1 566 296 32 0 chr18 11902186 11902375 -74086559 - MIR SINE MIR -33 229 35 472 312 109 47 chr18 11903520 11903879 -74085055 + L2 LINE L2 2583 2963 -351 275 337 11 11 chr18 11903984 11904079 -74084855 + L2 LINE L2 3199 3293 -20 204 299 118 31 chr18 11904081 11904138 -74084796 - MIR SINE MIR -75 187 136 2245 84 7 11 chr18 11904138 11904445 -74084489 + AluSq SINE Alu 1 306 0 204 299 118 31 chr18 11904445 11904513 -74084421 - MIR SINE MIR -126 136 50 416 240 217 58 chr18 11904872 11905130 -74083804 + AluJo SINE Alu 2 300 -2 1571 130 52 64 chr18 11905166 11905261 -74083673 + L1MB5 LINE L1 5749 5844 -330 2924 181 20 49 chr18 11905261 11905914 -74083020 + LTR27 LTR ERV1 1 634 -2 1571 130 52 64 chr18 11905914 11905949 -74082985 + L1MB5 LINE L1 5844 5878 -296 2264 99 3 3 chr18 11905949 11906253 -74082681 + AluSg SINE Alu 1 304 -6 1571 130 52 64 chr18 11906253 11906549 -74082385 + L1MB5 LINE L1 5878 6172 -2 906 173 129 10 chr18 11906633 11906835 -74082099 + L1MA9 LINE L1 6050 6275 -37 545 288 123 29 chr18 11907852 11908095 -74080839 + MLT1K LTR MaLR 186 451 -137 2185 97 3 0 chr18 11908300 11908590 -74080344 + AluSp SINE Alu 1 291 -22 2316 56 0 26 chr18 11908597 11908900 -74080034 + AluY SINE Alu 1 295 -16 3906 152 36 6 chr18 11908901 11909592 -74079342 - L1MB3 LINE L1 -3 6180 5469 22 56 0 0 chr18 11910822 11910858 -74078076 + AT_rich Low_complexity Low_complexity 1 36 0 288 279 107 118 chr18 11913219 11913566 -74075368 - MARNA DNA Mariner -232 354 12 251 125 0 25 chr18 11915492 11915532 -74073402 - MER116 DNA Mariner 0 80 42 208 143 0 0 chr18 11915921 11915956 -74072978 + (CACCAT)n Simple_repeat Simple_repeat 4 38 0 428 133 0 0 chr18 11918491 11918551 -74070383 + AluJ/FLAM SINE Alu 13 72 -240 198 0 0 0 chr18 11919886 11919908 -74069026 + (TCTA)n Simple_repeat Simple_repeat 2 23 0 830 96 0 0 chr18 11919908 11920023 -74068911 - AluSg/x SINE Alu -18 294 180 566 303 101 21 chr18 11920164 11920353 -74068581 - MIR SINE MIR -2 260 88 1977 114 14 0 chr18 11920353 11920634 -74068300 + AluSx SINE Alu 1 285 -27 267 31 0 0 chr18 11920634 11920666 -74068268 + (CCAA)n Simple_repeat Simple_repeat 2 33 0 566 303 101 21 chr18 11920666 11920713 -74068221 - MIR SINE MIR -173 89 4 2383 51 3 3 chr18 11922524 11922816 -74066118 - AluY SINE Alu -19 292 1 1636 170 3 28 chr18 11923033 11923350 -74065584 + AluJb SINE Alu 1 309 -3 334 325 58 26 chr18 11924326 11924517 -74064417 - MARNA DNA Mariner -149 437 241 305 328 23 8 chr18 11924655 11924786 -74064148 + MIR SINE MIR 12 144 -118 189 0 0 0 chr18 11925670 11925691 -74063243 + (A)n Simple_repeat Simple_repeat 1 21 0 5753 30 6 0 chr18 11927312 11927981 -74060953 - L1PA3 LINE L1 0 6155 5483 472 98 24 12 chr18 11928581 11928663 -74060271 - AluJ/FRAM SINE Alu -10 302 220 196 229 0 71 chr18 11930172 11930242 -74058692 + L2 LINE L2 2553 2617 -697 184 248 37 83 chr18 11930242 11930351 -74058583 + L2 LINE L2 3197 3300 -13 1327 258 93 44 chr18 11930353 11931040 -74057894 + L1MEc LINE L1 1366 2086 -4310 307 350 28 21 chr18 11931134 11931277 -74057657 - MIR SINE MIR -50 212 69 189 74 0 0 chr18 11931395 11931422 -74057512 + (TA)n Simple_repeat Simple_repeat 2 28 0 2421 145 46 5 chr18 11931479 11931894 -74057040 + MSTB1 LTR MaLR 1 432 0 435 324 42 38 chr18 11932722 11932960 -74055974 + L2 LINE L2 1849 2087 -1227 258 215 46 15 chr18 11933400 11933465 -74055469 - Charlie4 DNA MER1_type -4 1957 1891 457 259 14 63 chr18 11933573 11933716 -74055218 - Charlie4 DNA MER1_type -1816 145 10 250 286 84 121 chr18 11933845 11934191 -74054743 + L2 LINE L2 2899 3231 -41 25 31 0 0 chr18 11934937 11934969 -74053965 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr18 11935028 11935050 -74053884 + AT_rich Low_complexity Low_complexity 1 22 0 876 246 88 51 chr18 11935337 11935436 -74053498 + MER20B DNA MER1_type 266 360 -423 1920 134 23 3 chr18 11935436 11935741 -74053193 + AluSx SINE Alu 1 311 -1 876 246 88 51 chr18 11935741 11936093 -74052841 + MER20B DNA MER1_type 360 734 -49 4618 152 72 17 chr18 11936093 11936482 -74052452 + L1MB7 LINE L1 5254 5620 -564 2093 94 0 0 chr18 11936482 11936779 -74052155 + AluY SINE Alu 1 297 -14 4618 152 72 17 chr18 11936779 11937263 -74051671 + L1MB7 LINE L1 5620 6175 -9 241 179 122 0 chr18 11937272 11937395 -74051539 - Zaphod DNA AcHobo -3197 834 697 1606 173 102 27 chr18 11938018 11938389 -74050545 + LOR1b LTR ERV1 63 461 0 315 346 29 29 chr18 11938669 11938805 -74050129 + MIR3 SINE MIR 50 185 -23 2032 103 0 7 chr18 11938860 11939150 -74049784 - AluSq SINE Alu -21 292 5 375 57 19 0 chr18 11939155 11939208 -74049726 + MADE1 DNA Mariner 27 80 0 2324 153 44 7 chr18 11939251 11939662 -74049272 - MSTB LTR MaLR 0 426 1 3801 175 59 3 chr18 11939813 11940546 -74048388 - MER21B LTR ERV1 -52 811 1 1697 156 68 10 chr18 11940676 11940984 -74047950 - Tigger1 DNA MER2_type -2092 326 1 1613 169 0 49 chr18 11941111 11941418 -74047516 + AluJo SINE Alu 3 294 -18 312 238 109 20 chr18 11941535 11941636 -74047298 + MER94 DNA DNA 1 110 -24 335 326 31 8 chr18 11941761 11941890 -74047044 - L2 LINE L2 0 3313 3182 885 186 36 21 chr18 11941897 11942090 -74046844 + MER90 LTR ERV1 3 198 -416 * 1806 241 15 35 chr18 11942086 11942814 -74046120 - MER45B DNA AcHobo -221 819 56 2072 104 13 3 chr18 11942815 11943113 -74045821 - AluSq SINE Alu -12 301 1 684 246 152 13 chr18 11943261 11943485 -74045449 + MIR SINE MIR 8 262 0 383 333 8 16 chr18 11943774 11943900 -74045034 - MIR SINE MIR -100 162 38 189 0 0 0 chr18 11944865 11944886 -74044048 + (TG)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr18 11945686 11945707 -74043227 + AT_rich Low_complexity Low_complexity 1 21 0 2129 105 7 0 chr18 11946503 11946797 -74042137 + AluSx SINE Alu 1 296 -16 359 284 66 95 chr18 11947302 11947513 -74041421 + MIR SINE MIR 32 236 -26 216 288 0 15 chr18 11947514 11947580 -74041354 + MIR SINE MIR 66 130 -132 2111 93 7 23 chr18 11948038 11948340 -74040594 - AluSx SINE Alu -15 297 1 2811 180 71 7 chr18 11949240 11949817 -74039117 + LTR26E LTR ERV1 9 622 0 502 239 113 7 chr18 11949900 11950042 -74038892 - MER5A DNA MER1_type 0 189 33 2344 91 0 0 chr18 11950181 11950488 -74038446 + AluSx SINE Alu 1 307 -5 25 0 0 0 chr18 11950749 11950774 -74038160 + AT_rich Low_complexity Low_complexity 1 25 0 711 56 0 0 chr18 11951407 11951496 -74037438 + AluSg/x SINE Alu 211 299 -13 1737 146 24 3 chr18 11951936 11952223 -74036711 - AluSx SINE Alu -13 299 7 996 56 0 0 chr18 11952235 11952360 -74036574 - AluSp/q SINE Alu -10 303 179 4028 135 43 53 chr18 11952462 11953518 -74035416 + Harlequin LTR ERV1 1366 2410 -4486 345 153 9 0 chr18 11953625 11953684 -74035250 + MLT1D LTR MaLR 404 505 0 2015 204 17 17 chr18 11953714 11954125 -74034809 - MLT1E2 LTR MaLR 0 626 216 1838 131 32 0 chr18 11954126 11954408 -74034526 - AluY SINE Alu -20 291 1 1727 81 5 0 chr18 11954415 11954637 -74034297 - AluSp SINE Alu -22 291 69 361 146 52 14 chr18 11954737 11954951 -74033983 + (TG)n Simple_repeat Simple_repeat 1 222 0 1047 255 118 21 chr18 11954951 11955374 -74033560 + LTR16B LTR ERVL 1 464 0 642 290 29 68 chr18 11955684 11955994 -74032940 + HERV16 LTR ERVL 372 669 -4327 1650 229 45 40 chr18 11956154 11956312 -74032622 + MER110 LTR ERV1 66 222 -269 1575 177 7 17 chr18 11956312 11956612 -74032322 + AluJo SINE Alu 5 301 -11 1650 229 45 40 chr18 11956612 11956877 -74032057 + MER110 LTR ERV1 222 491 0 2155 108 0 0 chr18 11957778 11958075 -74030859 + AluSx SINE Alu 1 297 -15 257 358 85 40 chr18 11958385 11958561 -74030373 + L2 LINE L2 2700 2883 -431 1791 138 24 14 chr18 11958828 11959124 -74029810 - AluSx SINE Alu -13 299 1 1437 167 0 0 chr18 11960933 11961161 -74027773 + AluJo SINE Alu 1 228 -84 1954 142 75 143 chr18 11961302 11962013 -74026921 - MER4A LTR ERV1 0 664 3 904 234 31 31 chr18 11962269 11962495 -74026439 + MLT1A1 LTR MaLR 1 226 -139 260 149 30 134 chr18 11962496 11962563 -74026371 - MLT1A1 LTR MaLR -89 276 216 1490 166 0 104 chr18 11962865 11963000 -74025934 + AluJo SINE Alu 1 148 -164 2159 82 0 3 chr18 11963000 11963293 -74025641 + AluY SINE Alu 5 296 -15 1490 166 0 104 chr18 11963293 11963494 -74025440 + AluJo SINE Alu 148 302 -10 2264 89 28 8 chr18 11963528 11963924 -74025010 - LTR7 LTR ERV1 -2 448 1 702 286 87 44 chr18 11964406 11964773 -74024161 + MLT1I LTR MaLR 27 409 0 236 305 73 46 chr18 11966403 11966554 -74022380 - MIR SINE MIR -11 251 97 2086 168 128 2 chr18 11966556 11966962 -74021972 + LTR32 LTR ERVL 15 471 0 221 359 65 0 chr18 11966962 11967054 -74021880 - MIR SINE MIR -163 99 2 862 178 13 0 chr18 11967190 11967342 -74021592 - MLT1A1 LTR MaLR 0 365 212 386 151 0 55 chr18 11967353 11967426 -74021508 - MLT1A1 LTR MaLR -296 69 1 1066 209 88 0 chr18 11967500 11967715 -74021219 - MLT1E LTR MaLR 0 593 360 417 221 58 0 chr18 11967756 11967842 -74021092 - MLT1E LTR MaLR -410 183 93 241 301 14 0 chr18 11967960 11968033 -74020901 + MER69 DNA AcHobo 16 89 -1137 271 169 324 0 chr18 11968095 11968166 -74020768 - MER69 DNA AcHobo -2430 96 3 558 136 0 0 chr18 11968537 11968655 -74020279 + (TG)n Simple_repeat Simple_repeat 1 118 0 393 296 114 90 chr18 11968755 11969475 -74019459 + L2 LINE L2 1290 2026 -1288 25940 61 4 3 chr18 11970301 11975375 -74013559 + Harlequin LTR ERV1 1757 6896 0 1911 189 69 35 chr18 11975394 11975829 -74013105 + LTR2B LTR ERV1 32 481 -9 743 174 8 0 chr18 11975829 11975950 -74012984 + AluSg/x SINE Alu 166 287 -25 22 0 0 0 chr18 11975950 11975972 -74012962 + AT_rich Low_complexity Low_complexity 1 22 0 3180 159 71 36 chr18 11976145 11976858 -74012076 - LTR48 LTR ERV1 -7 780 1 24 53 0 0 chr18 11976889 11976927 -74012007 + AT_rich Low_complexity Low_complexity 1 38 0 1507 179 13 23 chr18 11976982 11977283 -74011651 + AluJo SINE Alu 1 298 -14 6595 24 0 0 chr18 11977637 11978386 -74010548 + L1PA3 LINE L1 5404 6152 -3 1553 169 0 34 chr18 11978673 11978993 -74009941 - AluJb SINE Alu -3 309 1 1080 198 61 0 chr18 11979234 11979497 -74009437 - L1M4 LINE L1 -1152 4994 4716 349 202 0 22 chr18 11979494 11979583 -74009351 + L1M4 LINE L1 4646 4732 -1414 * 2058 108 0 3 chr18 11979695 11979992 -74008942 + AluY SINE Alu 1 296 -15 1003 147 0 81 chr18 11979995 11980193 -74008741 + AluJo SINE Alu 121 302 -10 2264 89 28 8 chr18 11980227 11980623 -74008311 - LTR7 LTR ERV1 -2 448 1 702 286 87 44 chr18 11981105 11981472 -74007462 + MLT1I LTR MaLR 27 409 0 236 305 73 46 chr18 11983102 11983253 -74005681 - MIR SINE MIR -11 251 97 2086 168 128 2 chr18 11983255 11983661 -74005273 + LTR32 LTR ERVL 15 471 0 221 359 65 0 chr18 11983661 11983753 -74005181 - MIR SINE MIR -163 99 2 862 178 13 0 chr18 11983889 11984041 -74004893 - MLT1A1 LTR MaLR 0 365 212 386 151 0 55 chr18 11984052 11984125 -74004809 - MLT1A1 LTR MaLR -296 69 1 1066 209 88 0 chr18 11984199 11984414 -74004520 - MLT1E LTR MaLR 0 593 360 417 221 58 0 chr18 11984455 11984541 -74004393 - MLT1E LTR MaLR -410 183 93 241 301 14 0 chr18 11984659 11984732 -74004202 + MER69 DNA AcHobo 16 89 -1137 271 169 324 0 chr18 11984794 11984865 -74004069 - MER69 DNA AcHobo -2430 96 3 558 136 0 0 chr18 11985236 11985354 -74003580 + (TG)n Simple_repeat Simple_repeat 1 118 0 398 297 112 90 chr18 11985454 11986175 -74002759 + L2 LINE L2 1290 2026 -1288 345 153 9 0 chr18 11986863 11986922 -74002012 + MLT1D LTR MaLR 404 505 0 2150 201 15 39 chr18 11986952 11987364 -74001570 - MLT1E2 LTR MaLR 0 626 225 2185 78 32 0 chr18 11987364 11987646 -74001288 - AluY SINE Alu -20 291 1 2150 201 15 39 chr18 11987646 11987691 -74001243 - MLT1E2 LTR MaLR -401 225 180 1982 145 0 0 chr18 11987691 11988002 -74000932 - AluSx SINE Alu -1 311 1 4675 172 15 31 chr18 11988049 11988977 -73999957 - L1MB7 LINE L1 -16 6168 5256 3575 174 13 3 chr18 11989023 11989639 -73999295 - LTR26E LTR ERV1 0 622 1 351 321 165 55 chr18 11989662 11990120 -73998814 + L2 LINE L2 2764 3269 -3 259 260 24 81 chr18 11990148 11990185 -73998749 - MIR3 SINE MIR -34 174 136 2424 166 81 48 chr18 11990185 11990356 -73998578 - MER89 LTR ERV1 0 559 395 1606 171 4 0 chr18 11990356 11990620 -73998314 + AluSq SINE Alu 1 265 -48 2424 166 81 48 chr18 11990620 11990989 -73997945 - MER89 LTR ERV1 -164 395 1 259 260 24 81 chr18 11990989 11991074 -73997860 - MIR3 SINE MIR -72 136 59 1927 130 14 3 chr18 11991216 11991509 -73997425 + AluSq SINE Alu 1 296 -17 67 65 0 0 chr18 11992150 11992273 -73996661 + AT_rich Low_complexity Low_complexity 1 123 0 633 241 23 45 chr18 11992526 11992791 -73996143 - L1MC5 LINE L1 -181 7780 7522 239 167 21 21 chr18 11992849 11992897 -73996037 - Charlie8 DNA MER1_type -1010 1407 1360 257 209 90 0 chr18 11992913 11992980 -73995954 - Charlie8 DNA MER1_type -1905 512 440 393 302 181 19 chr18 11993093 11993167 -73995767 - Charlie8 DNA MER1_type -1914 503 442 2132 98 3 35 chr18 11993167 11993484 -73995450 - AluSx SINE Alu -5 307 1 393 302 181 19 chr18 11993484 11993780 -73995154 - Charlie8 DNA MER1_type -1975 442 73 1544 207 125 23 chr18 11993884 11994308 -73994626 - MER39 LTR ERV1 0 707 116 3752 170 58 47 chr18 11994382 11994591 -73994343 + MER4E LTR ERV1 1 206 -573 1579 68 0 23 chr18 11994591 11994810 -73994124 - AluY SINE Alu 0 311 98 3752 170 58 47 chr18 11994810 11995038 -73993896 + MER4E LTR ERV1 206 430 -349 1992 115 30 0 chr18 11995038 11995334 -73993600 - AluSx SINE Alu -7 305 1 3752 170 58 47 chr18 11995334 11995665 -73993269 + MER4E LTR ERV1 430 779 0 2661 161 89 25 chr18 11995731 11995766 -73993168 - LTR49 LTR ERV1 0 595 564 2298 153 51 10 chr18 11995766 11996177 -73992757 - MSTA LTR MaLR 0 428 1 2661 161 89 25 chr18 11996177 11996297 -73992637 - LTR49 LTR ERV1 -31 564 453 2732 106 22 35 chr18 11996297 11996422 -73992512 - LTR56 LTR ERV1 0 445 320 2102 132 0 3 chr18 11996422 11996733 -73992201 - AluSx SINE Alu -2 310 1 2732 106 22 35 chr18 11996733 11997058 -73991876 - LTR56 LTR ERV1 -125 320 1 2661 161 89 25 chr18 11997058 11997460 -73991474 - LTR49 LTR ERV1 -142 453 1 1282 110 151 9 chr18 11997604 11997802 -73991132 + LTR24 LTR ERV1 1 229 -238 1801 144 14 0 chr18 11997802 11998080 -73990854 + MER49 LTR ERV1 1 282 -641 1708 186 41 12 chr18 11998114 11998458 -73990476 + MER4D LTR ERV1 550 903 0 3141 137 2 32 chr18 11998489 11998994 -73989940 + LTR9 LTR ERV1 1 490 -122 4052 151 86 35 chr18 11998994 12000400 -73988534 + pTR5 LTR ERV1 743 2606 0 780 151 40 0 chr18 12000401 12000527 -73988407 + LTR9 LTR ERV1 482 612 0 * 1246 191 0 5 chr18 12000527 12000740 -73988194 + LTR24 LTR ERV1 256 467 0 22 35 0 0 chr18 12000791 12000820 -73988114 + AT_rich Low_complexity Low_complexity 1 29 0 2178 177 105 116 chr18 12000857 12001372 -73987562 + LTR8A LTR ERV1 1 507 -220 2126 99 99 34 chr18 12001372 12001726 -73987208 - MER51B LTR ERV1 0 377 1 2178 177 105 116 chr18 12001726 12001945 -73986989 + LTR8A LTR ERV1 507 727 0 271 310 11 46 chr18 12002163 12002250 -73986684 + MER5A DNA MER1_type 9 92 -97 1699 157 10 3 chr18 12002316 12002615 -73986319 + AluSq SINE Alu 1 301 -12 1069 196 138 20 chr18 12002740 12003081 -73985853 + LTR37A LTR ERV1 46 426 0 826 193 87 43 chr18 12003116 12003323 -73985611 - MER20 DNA MER1_type -3 216 1 2551 154 148 6 chr18 12003415 12003936 -73984998 + LTR49 LTR ERV1 1 595 0 246 128 0 0 chr18 12004307 12004346 -73984588 + (TTCA)n Simple_repeat Simple_repeat 4 42 0 896 215 12 135 chr18 12004399 12004683 -73984251 + LTR8 LTR ERV1 1 266 -435 222 258 0 0 chr18 12004684 12004746 -73984188 + CT-rich Low_complexity Low_complexity 3 64 0 757 220 38 0 chr18 12004748 12004907 -73984027 - FRAM SINE Alu 0 166 2 1401 199 0 4 chr18 12004913 12005180 -73983754 - AluSx SINE Alu -46 266 1 1702 182 80 35 chr18 12005233 12005635 -73983299 + LTR8A LTR ERV1 308 727 0 428 285 192 5 chr18 12005718 12005911 -73983023 - MIR SINE MIR 0 262 34 272 255 0 0 chr18 12006011 12006062 -73982872 - L2 LINE L2 -223 3049 2999 2203 122 0 0 chr18 12006138 12006450 -73982484 + AluSx SINE Alu 1 312 0 2164 175 107 6 chr18 12006566 12007114 -73981820 - L1M3 LINE L1 -457 5723 5232 217 0 0 0 chr18 12007114 12007138 -73981796 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 2135 102 3 41 chr18 12007138 12007432 -73981502 - AluSq SINE Alu -30 283 1 2164 175 107 6 chr18 12007432 12007615 -73981319 - L1M3 LINE L1 -947 5233 4930 1277 219 99 66 chr18 12007615 12008132 -73980802 - MER34C LTR ERV1 0 585 52 1586 199 3 0 chr18 12008161 12008458 -73980476 - L1M3 LINE L1 -1214 4932 4635 2319 174 57 19 chr18 12008555 12009066 -73979868 + MER39 LTR ERV1 1 704 -3 1482 201 81 84 chr18 12009230 12009458 -73979476 + L1M4 LINE L1 4307 4534 -1612 2086 136 0 7 chr18 12009458 12009759 -73979175 - AluSg SINE Alu -11 299 1 1482 201 81 84 chr18 12009759 12010220 -73978714 + L1M4 LINE L1 4534 4994 -1152 1662 169 0 34 chr18 12010461 12010781 -73978153 + AluJb SINE Alu 1 309 -3 6608 24 0 0 chr18 12011068 12011817 -73977117 - L1PA3 LINE L1 -3 6152 5404 1621 179 13 23 chr18 12012171 12012472 -73976462 - AluJo SINE Alu -14 298 1 24 53 0 0 chr18 12012527 12012565 -73976369 + AT_rich Low_complexity Low_complexity 1 38 0 3178 157 71 36 chr18 12012596 12013309 -73975625 + LTR48 LTR ERV1 1 780 -7 22 0 0 0 chr18 12013482 12013504 -73975430 + AT_rich Low_complexity Low_complexity 1 22 0 736 174 8 0 chr18 12013504 12013625 -73975309 - AluSg/x SINE Alu -25 285 164 1898 189 69 35 chr18 12013625 12014060 -73974874 - LTR2B LTR ERV1 -9 481 32 48562 59 34 18 chr18 12014079 12020426 -73968508 - Harlequin LTR ERV1 0 6896 448 510 109 54 7 chr18 12020544 12020691 -73968243 + (CA)n Simple_repeat Simple_repeat 1 154 0 574 145 28 28 chr18 12020705 12020884 -73968050 + (CA)n Simple_repeat Simple_repeat 2 180 0 1129 150 4 90 chr18 12021347 12021580 -73967354 + AluJo SINE Alu 75 287 -25 2857 195 4 0 chr18 12021609 12022136 -73966798 + L1MB3 LINE L1 5652 6180 -3 234 194 0 90 chr18 12023088 12023155 -73965779 + L2 LINE L2 3209 3269 -3 3784 187 9 25 chr18 12023555 12023597 -73965337 + L1MB3 LINE L1 5446 5487 -696 1917 164 0 0 chr18 12023597 12023884 -73965050 + AluJo SINE Alu 2 288 -24 3784 187 9 25 chr18 12023884 12024591 -73964343 + L1MB3 LINE L1 5487 6183 0 221 279 154 0 chr18 12024769 12024873 -73964061 - MIR3 SINE MIR -7 201 82 1823 156 3 36 chr18 12025020 12025322 -73963612 + AluJo SINE Alu 1 292 -20 364 254 18 55 chr18 12025610 12025720 -73963214 - L2 LINE L2 -5 3267 3162 239 130 0 22 chr18 12025906 12025952 -73962982 + (TGGG)n Simple_repeat Simple_repeat 2 46 0 1511 242 120 21 chr18 12025990 12026515 -73962419 - MLT2F LTR ERVL -86 577 1 186 309 43 11 chr18 12026532 12026626 -73962308 - L2 LINE L2 -208 3064 2968 226 273 0 62 chr18 12026841 12026868 -73962066 + C-rich Low_complexity Low_complexity 2 29 -92 696 152 30 23 chr18 12026868 12027000 -73961934 - FLAM_A SINE Alu 0 133 1 226 273 0 62 chr18 12027000 12027100 -73961834 + C-rich Low_complexity Low_complexity 29 121 0 188 67 33 0 chr18 12027577 12027607 -73961327 + (GGGA)n Simple_repeat Simple_repeat 4 34 0 2603 222 42 2 chr18 12027715 12028291 -73960643 - MER77 LTR ERV1 -3 602 4 1603 130 11 27 chr18 12028596 12028857 -73960077 - AluJo SINE Alu -15 297 41 448 250 71 14 chr18 12028897 12029037 -73959897 - MIR SINE MIR -8 254 107 7418 106 19 4 chr18 12029654 12031337 -73957597 - L1MA1 LINE L1 -4 6298 4591 235 129 0 48 chr18 12031968 12032030 -73956904 + (TTA)n Simple_repeat Simple_repeat 3 61 0 3376 109 24 0 chr18 12032030 12032533 -73956401 + L1MA2 LINE L1 5786 6300 -4 23 33 0 0 chr18 12032533 12032563 -73956371 + AT_rich Low_complexity Low_complexity 1 30 0 919 236 110 136 chr18 12032926 12033007 -73955927 - MER21B LTR ERV1 -7 598 516 890 134 0 0 chr18 12033007 12033134 -73955800 + FLAM_C SINE Alu 1 127 -6 919 236 110 136 chr18 12033134 12033147 -73955787 - MER21B LTR ERV1 -89 516 504 1663 176 10 20 chr18 12033147 12033448 -73955486 + AluJo SINE Alu 3 300 -12 919 236 110 136 chr18 12033448 12034016 -73954918 - MER21B LTR ERV1 -101 504 121 4438 132 88 18 chr18 12034164 12034929 -73954005 - MER4D LTR ERV1 -85 818 1 474 221 7 66 chr18 12034929 12035065 -73953869 - MIR SINE MIR -86 176 49 304 277 45 32 chr18 12035755 12035910 -73953024 + MIR SINE MIR 8 164 -98 640 160 0 0 chr18 12036385 12036485 -73952449 - FLAM_C SINE Alu -33 110 11 225 150 50 0 chr18 12036700 12036740 -73952194 + GA-rich Low_complexity Low_complexity 2 43 0 3046 125 70 22 chr18 12036772 12037317 -73951617 + LTR24B LTR ERV1 3 631 -4 329 248 99 0 chr18 12037378 12037479 -73951455 - L2 LINE L2 -1 3312 3202 2228 105 3 3 chr18 12038520 12038816 -73950118 - AluSx SINE Alu -14 298 3 2123 138 3 0 chr18 12039195 12039492 -73949442 - AluSx SINE Alu -14 298 1 382 175 0 0 chr18 12039625 12039688 -73949246 - AluS SINE Alu -6 294 232 1997 146 10 0 chr18 12040754 12041062 -73947872 + AluJo SINE Alu 1 311 -1 369 306 7 34 chr18 12041367 12041514 -73947420 + MIR SINE MIR 37 179 -83 1419 165 114 25 chr18 12041795 12041928 -73947006 - MER2 DNA MER2_type 0 344 224 2659 45 0 16 chr18 12041928 12042240 -73946694 - AluY SINE Alu -4 307 1 1419 165 114 25 chr18 12042240 12042422 -73946512 - MER2 DNA MER2_type -120 224 1 266 339 63 31 chr18 12042441 12042568 -73946366 + MIR3 SINE MIR 30 160 -48 202 337 0 12 chr18 12042756 12042839 -73946095 - MIR SINE MIR -13 249 168 2043 151 3 0 chr18 12042877 12043181 -73945753 + AluJb SINE Alu 1 305 -7 1235 195 8 112 chr18 12043328 12043727 -73945207 - MLT1E3 LTR MaLR 0 624 289 644 170 0 0 chr18 12043727 12043833 -73945101 + FLAM_C SINE Alu 27 132 -11 1030 207 102 4 chr18 12043838 12044094 -73944840 - MLT1E3 LTR MaLR -330 324 44 323 300 20 0 chr18 12044994 12045094 -73943840 - MIR SINE MIR -114 148 47 408 264 149 0 chr18 12045962 12046110 -73942824 - MIR SINE MIR -44 218 49 1010 99 0 93 chr18 12046752 12046934 -73942000 - AluSg/x SINE Alu -10 300 136 1186 120 0 29 chr18 12046946 12047121 -73941813 - AluSq SINE Alu -143 170 1 2253 106 7 0 chr18 12049032 12049324 -73939610 - AluSx SINE Alu -18 294 1 827 167 8 0 chr18 12049582 12049714 -73939220 + FLAM_C SINE Alu 1 133 0 5526 122 20 19 chr18 12049739 12049906 -73939028 + L1MC1 LINE L1 5445 5610 -723 2197 104 3 38 chr18 12049906 12050224 -73938710 + AluSx SINE Alu 1 307 -5 5526 122 20 19 chr18 12050224 12050943 -73937991 + L1MC1 LINE L1 5610 6332 -1 425 237 136 77 chr18 12051287 12051310 -73937624 - MER5A DNA MER1_type 0 189 169 2523 134 49 5 chr18 12051310 12051720 -73937214 - MSTA LTR MaLR 0 428 1 425 237 136 77 chr18 12051720 12051865 -73937069 - MER5A DNA MER1_type -20 169 11 1071 244 4 4 chr18 12052450 12052708 -73936226 + LTR37B LTR ERV1 50 307 -161 809 136 0 0 chr18 12052749 12052867 -73936067 - FLAM_C SINE Alu -15 118 1 732 89 36 27 chr18 12052894 12053006 -73935928 + AluJb SINE Alu 23 135 -177 894 128 40 7 chr18 12053006 12053155 -73935779 + LTR37B LTR ERV1 315 468 0 2450 167 70 45 chr18 12053423 12053533 -73935401 + MLT1F1 LTR MaLR 27 133 -434 1701 174 7 4 chr18 12053533 12053860 -73935074 - AluJb SINE Alu 0 328 1 2450 167 70 45 chr18 12053860 12054276 -73934658 + MLT1F1 LTR MaLR 133 567 0 445 242 47 77 chr18 12054276 12054536 -73934398 - L1MC/D LINE L1 -518 5603 5373 681 337 92 0 chr18 12054777 12055083 -73933851 + LTR16A LTR ERVL 117 450 0 311 254 28 0 chr18 12055420 12055491 -73933443 + L2 LINE L2 3241 3313 0 2322 97 3 3 chr18 12056710 12057010 -73931924 + AluSq SINE Alu 1 300 -13 756 308 112 46 chr18 12057802 12058345 -73930589 + L1MEd LINE L1 59 565 -5554 1524 165 98 61 chr18 12058345 12058657 -73930277 + MLT1B LTR MaLR 1 331 -59 1845 142 11 4 chr18 12058657 12058938 -73929996 + AluJo SINE Alu 17 299 -13 1524 165 98 61 chr18 12058938 12059001 -73929933 + MLT1B LTR MaLR 331 390 0 756 308 112 46 chr18 12059001 12059477 -73929457 + L1MEd LINE L1 565 1145 -4974 1044 223 9 14 chr18 12059527 12059747 -73929187 + AluJo SINE Alu 1 219 -93 469 301 79 17 chr18 12059747 12060124 -73928810 + L1MEd LINE L1 1174 1635 -855 2653 99 6 8 chr18 12060476 12060841 -73928093 + THE1B LTR MaLR 1 364 0 226 229 0 24 chr18 12061117 12061200 -73927734 - L1MEc LINE L1 -4907 1489 1409 2164 112 10 3 chr18 12061393 12061687 -73927247 + AluSx SINE Alu 15 310 -2 207 0 0 0 chr18 12061691 12061714 -73927220 + (A)n Simple_repeat Simple_repeat 1 23 0 1069 89 15 0 chr18 12061830 12061965 -73926969 - AluSq/x SINE Alu -176 137 1 1010 208 58 12 chr18 12061972 12062328 -73926606 - L1ME LINE L1 -690 5476 5100 1801 139 45 21 chr18 12062328 12062615 -73926319 - AluJb SINE Alu -18 294 1 1010 208 58 12 chr18 12062615 12062634 -73926300 - L1ME LINE L1 -1066 5100 5083 2598 4 0 0 chr18 12062636 12062911 -73926023 + AluYa5 SINE Alu 37 311 0 2237 103 0 14 chr18 12064735 12065026 -73923908 - AluSx SINE Alu -22 290 4 1658 157 21 14 chr18 12065517 12065798 -73923136 + AluJo SINE Alu 14 296 -16 33 0 0 0 chr18 12066091 12066124 -73922810 + AT_rich Low_complexity Low_complexity 1 33 0 1084 160 0 12 chr18 12066124 12066293 -73922641 - FAM SINE Alu -8 167 1 2233 40 0 15 chr18 12066406 12066785 -73922149 + L1P2 LINE L1 5157 5531 -623 210 37 0 0 chr18 12066785 12066812 -73922122 + (T)n Simple_repeat Simple_repeat 1 27 0 288 0 0 0 chr18 12066947 12066979 -73921955 + (A)n Simple_repeat Simple_repeat 1 32 0 525 234 28 28 chr18 12067034 12067198 -73921736 - L1ME LINE L1 -1142 5004 4841 297 75 0 0 chr18 12067207 12067247 -73921687 + (TA)n Simple_repeat Simple_repeat 2 41 0 1033 137 35 150 chr18 12067259 12067344 -73921590 - L1 LINE L1 -1803 4343 4250 1840 158 20 30 chr18 12067344 12067647 -73921287 - AluJo SINE Alu -10 302 3 1033 137 35 150 chr18 12067647 12067749 -73921185 - L1 LINE L1 -1896 4250 4204 1487 122 20 0 chr18 12067749 12067995 -73920939 - L1MA8 LINE L1 -6 6285 6035 1033 137 35 150 chr18 12067995 12068120 -73920814 - L1 LINE L1 -1942 4204 4066 1855 165 56 6 chr18 12068120 12068478 -73920456 - Cheshire DNA MER1_type -393 2027 1652 1460 189 32 59 chr18 12068478 12068547 -73920387 - MLT1A1 LTR MaLR 0 365 296 2411 104 3 0 chr18 12068547 12068854 -73920080 + AluSq SINE Alu 1 308 -5 1460 189 32 59 chr18 12068854 12069159 -73919775 - MLT1A1 LTR MaLR -69 296 1 6555 208 14 52 chr18 12069160 12070404 -73918530 - MLT1A1-int LTR MaLR -1 1734 550 1708 164 0 11 chr18 12070404 12070666 -73918268 - AluJb SINE Alu -53 259 1 6555 208 14 52 chr18 12070666 12070854 -73918080 - MLT1A1-int LTR MaLR -1185 550 356 330 200 8 0 chr18 12070858 12070923 -73918011 + MLT-int LTR MaLR 295 372 -999 1689 183 10 0 chr18 12071031 12071326 -73917608 - MLT1A1-int LTR MaLR -1433 302 5 3327 134 14 56 chr18 12071330 12071667 -73917267 - MLT2B3 LTR ERVL 0 554 249 219 36 0 0 chr18 12071667 12071695 -73917239 + (GA)n Simple_repeat Simple_repeat 2 29 0 3327 134 14 56 chr18 12071695 12071933 -73917001 - MLT2B3 LTR ERVL -305 249 3 643 157 33 85 chr18 12071933 12072038 -73916896 - Cheshire DNA MER1_type -762 1658 1562 1653 139 0 114 chr18 12072038 12072370 -73916564 - AluJb SINE Alu -18 294 1 643 157 33 85 chr18 12072370 12072417 -73916517 - Cheshire DNA MER1_type -858 1562 1514 1315 225 145 71 chr18 12072460 12073193 -73915741 + LTR1B LTR ERV1 1 787 -39 304 176 0 0 chr18 12073270 12073321 -73915613 - Cheshire DNA MER1_type -886 1534 1484 1816 73 9 0 chr18 12073322 12073542 -73915392 + AluSq SINE Alu 1 222 -91 2183 175 51 45 chr18 12073580 12073637 -73915297 - L1ME LINE L1 -1553 4593 4538 1220 225 82 7 chr18 12073637 12073917 -73915017 + AluJo SINE Alu 1 301 -1 2183 175 51 45 chr18 12073917 12074412 -73914522 - L1ME LINE L1 -1608 4538 4038 1199 244 37 10 chr18 12074423 12074722 -73914212 + MER21B LTR ERV1 492 798 -65 333 0 0 0 chr18 12075315 12075352 -73913582 + (TG)n Simple_repeat Simple_repeat 2 38 0 829 164 0 0 chr18 12075352 12075474 -73913460 - FLAM_C SINE Alu -17 126 5 2274 98 3 10 chr18 12075821 12076128 -73912806 - AluSx SINE Alu -7 305 1 237 317 98 32 chr18 12077507 12077630 -73911304 + L3 LINE CR1 1377 1507 -70 498 178 57 96 chr18 12078029 12078186 -73910748 + MER112 DNA MER1_type 9 159 -101 415 232 10 10 chr18 12078200 12078299 -73910635 - L1ME3A LINE L1 -3 6167 6069 2506 132 40 49 chr18 12078323 12078829 -73910105 - L1MB3 LINE L1 -2 6181 5681 6043 21 15 1 chr18 12078843 12079499 -73909435 + SVA Other Other 721 1385 -1 2001 140 9 22 chr18 12079503 12079785 -73909149 + AluSx SINE Alu 1 280 -32 261 0 0 0 chr18 12079785 12079814 -73909120 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 2001 140 9 22 chr18 12079814 12079846 -73909088 + AluSx SINE Alu 280 311 -1 21 0 0 0 chr18 12079846 12079867 -73909067 + AT_rich Low_complexity Low_complexity 1 21 0 701 243 153 26 chr18 12080417 12080817 -73908117 - MLT1H LTR MaLR -7 583 88 1102 162 44 48 chr18 12080817 12080987 -73907947 + L1MA4 LINE L1 6028 6198 -102 2081 128 3 3 chr18 12080987 12081283 -73907651 + AluJb SINE Alu 1 296 -16 1102 162 44 48 chr18 12081283 12081384 -73907550 + L1MA4 LINE L1 6198 6298 -2 342 212 91 10 chr18 12081393 12081492 -73907442 - MLT1H LTR MaLR -441 108 2 778 303 66 4 chr18 12081593 12081864 -73907070 + L1MC4a LINE L1 5614 5901 -1907 2292 83 0 3 chr18 12082020 12082308 -73906626 - AluSx SINE Alu -25 287 1 1710 181 7 7 chr18 12083132 12083443 -73905491 - AluJb SINE Alu 0 311 1 255 88 0 0 chr18 12083738 12083772 -73905162 - L1PA13 LINE L1 -561 5742 5709 2644 122 5 5 chr18 12083772 12084164 -73904770 + L1PA13 LINE L1 5772 6163 0 2112 184 124 4 chr18 12084178 12084629 -73904305 - MLT1D LTR MaLR 0 505 1 2528 138 77 33 chr18 12086208 12086394 -73902540 + LTR64 LTR ERVK 1 177 -336 1877 131 32 35 chr18 12086394 12086707 -73902227 + AluJo SINE Alu 1 312 0 2528 138 77 33 chr18 12086707 12087011 -73901923 + LTR64 LTR ERVK 177 513 0 914 137 0 36 chr18 12087472 12087611 -73901323 - AluJo SINE Alu -178 134 1 1278 170 3 109 chr18 12087616 12087946 -73900988 - AluJo SINE Alu -4 298 4 380 211 39 78 chr18 12088687 12088815 -73900119 - MER91B DNA MER1_type -60 130 8 2247 113 3 0 chr18 12089143 12089452 -73899482 - AluSx SINE Alu 0 312 3 235 117 0 57 chr18 12089453 12089472 -73899462 - MIR SINE MIR -66 142 123 1858 161 7 16 chr18 12089472 12089777 -73899157 - AluJb SINE Alu -10 302 1 235 117 0 57 chr18 12089777 12089825 -73899109 - MIR SINE MIR -85 123 104 221 95 0 24 chr18 12090042 12090084 -73898850 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 2389 135 29 58 chr18 12090087 12090532 -73898402 + MSTB1 LTR MaLR 1 432 0 2480 85 10 0 chr18 12090840 12091169 -73897765 + AluSg SINE Alu 1 332 0 234 0 0 0 chr18 12093162 12093188 -73895746 + (T)n Simple_repeat Simple_repeat 1 26 0 2149 112 3 10 chr18 12093463 12093759 -73895175 - AluSp SINE Alu -19 294 1 250 128 0 0 chr18 12093809 12093848 -73895086 + MER2 DNA MER2_type 1 39 -306 439 265 15 11 chr18 12094015 12094199 -73894735 + MER41B LTR ERV1 112 430 -205 1507 209 3 54 chr18 12094409 12094744 -73894190 + MER2 DNA MER2_type 28 345 0 458 229 19 0 chr18 12094820 12094925 -73894009 + MER112 DNA MER1_type 4 110 -150 1269 82 6 0 chr18 12094955 12095126 -73893808 - L1PA5 LINE L1 -1 6153 5982 995 132 0 0 chr18 12095126 12095262 -73893672 - AluSq/x SINE Alu -177 136 1 1588 169 21 18 chr18 12095655 12095934 -73893000 + AluJb SINE Alu 12 291 -21 1745 103 66 6 chr18 12096995 12097287 -73891647 - LTR45B LTR ERV1 -134 355 11 1179 173 72 22 chr18 12097292 12097527 -73891407 + MER33 DNA MER1_type 33 286 -2299 1896 154 14 3 chr18 12097527 12097820 -73891114 - AluSx SINE Alu -16 296 1 1179 173 72 22 chr18 12097820 12097862 -73891072 + MER33 DNA MER1_type 286 324 0 346 268 102 0 chr18 12098139 12098266 -73890668 - MIR3 SINE MIR -63 145 6 2231 115 0 3 chr18 12098811 12099124 -73889810 + AluSx SINE Alu 1 312 0 27 0 0 0 chr18 12100134 12100161 -73888773 + AT_rich Low_complexity Low_complexity 1 27 0 282 312 143 5 chr18 12100388 12100577 -73888357 + MIR SINE MIR 34 248 -14 825 234 53 13 chr18 12100774 12101001 -73887933 - MIR SINE MIR -21 241 6 3302 168 57 47 chr18 12101011 12101731 -73887203 + LTR8A LTR ERV1 1 727 0 1146 116 24 0 chr18 12102838 12103002 -73885932 - THE1C LTR MaLR -207 168 1 11800 99 9 8 chr18 12103002 12103081 -73885853 - THE1B-int LTR MaLR 0 1580 1503 2724 36 0 0 chr18 12103081 12103384 -73885550 - AluY SINE Alu -8 303 1 11800 99 9 8 chr18 12103384 12104883 -73884051 - THE1B-int LTR MaLR -77 1503 1 1976 111 52 47 chr18 12104883 12105245 -73883689 - THE1B LTR MaLR 0 364 1 2036 208 139 4 chr18 12105309 12105761 -73883173 + LTR40a LTR ERVL 4 516 -3 268 290 91 27 chr18 12105764 12105950 -73882984 + HERVL40 LTR ERVL 1 198 -5332 575 306 24 40 chr18 12106037 12106285 -73882649 + HERVL40 LTR ERVL 1265 1508 -4022 522 219 0 10 chr18 12106372 12106468 -73882466 + HERVL40 LTR ERVL 2523 2617 -2913 561 286 88 11 chr18 12106471 12106653 -73882281 + LTR16A LTR ERVL 233 428 -22 2021 124 17 17 chr18 12107272 12107570 -73881364 - AluSx SINE Alu -14 298 1 313 278 40 8 chr18 12108064 12108190 -73880744 - MIR SINE MIR -3 259 130 3291 169 47 30 chr18 12108512 12108927 -73880007 - L1MB7 LINE L1 -153 6031 5625 1854 174 0 0 chr18 12108927 12109226 -73879708 - AluJb SINE Alu -13 299 1 3291 169 47 30 chr18 12109226 12109346 -73879588 - L1MB7 LINE L1 -559 5625 5509 2517 75 0 3 chr18 12109346 12109654 -73879280 - AluY SINE Alu -4 307 1 3291 169 47 30 chr18 12109654 12109795 -73879139 - L1MB7 LINE L1 -675 5509 5372 180 0 0 0 chr18 12109795 12109815 -73879119 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 3291 169 47 30 chr18 12109815 12110454 -73878480 - L1MB7 LINE L1 -812 5372 4645 2182 107 27 0 chr18 12110906 12111204 -73877730 + AluSc SINE Alu 1 306 -3 195 42 0 0 chr18 12111207 12111231 -73877703 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 3833 101 6 21 chr18 12111383 12111918 -73877016 - MER1A DNA MER1_type 0 527 1 216 280 38 61 chr18 12112221 12112353 -73876581 - MIR SINE MIR -1 261 133 1749 186 7 3 chr18 12112802 12113098 -73875836 + AluJb SINE Alu 1 297 -15 2309 81 0 3 chr18 12113294 12113605 -73875329 - AluSx SINE Alu 0 310 1 23 54 0 0 chr18 12113620 12113657 -73875277 + AT_rich Low_complexity Low_complexity 1 37 0 2197 111 0 0 chr18 12113962 12114260 -73874674 - AluSx SINE Alu -12 300 3 279 164 0 36 chr18 12114640 12114687 -73874247 - L1MB1 LINE L1 -1 6167 6121 2461 68 10 0 chr18 12114687 12114980 -73873954 - AluSc SINE Alu -13 296 1 390 211 21 21 chr18 12114984 12115079 -73873855 - L1MB7 LINE L1 -2451 3695 3601 252 0 0 0 chr18 12115720 12115748 -73873186 + (TG)n Simple_repeat Simple_repeat 1 28 0 1938 154 10 0 chr18 12116049 12116354 -73872580 - AluJb SINE Alu -2 310 3 326 206 0 0 chr18 12116369 12116432 -73872502 - L1ME2 LINE L1 -19 6145 6083 1346 162 203 36 chr18 12116436 12116855 -73872079 + LTR54B LTR ERV1 8 496 -2 298 274 41 14 chr18 12116855 12116928 -73872006 - L1ME1 LINE L1 -78 6088 6014 1707 214 57 44 chr18 12116930 12117250 -73871684 - L1ME1 LINE L1 -202 5964 5635 2257 97 7 3 chr18 12117250 12117549 -73871385 + AluSq SINE Alu 1 300 -13 1707 214 57 44 chr18 12117549 12117705 -73871229 - L1ME1 LINE L1 -531 5635 5482 319 292 62 9 chr18 12118491 12118604 -73870330 + MIR3 SINE MIR 36 154 -54 2279 127 20 0 chr18 12120658 12121005 -73867929 + L1PA16 LINE L1 5793 6146 -20 21 36 0 0 chr18 12121007 12121035 -73867899 + AT_rich Low_complexity Low_complexity 1 28 0 1582 181 10 17 chr18 12121121 12121419 -73867515 - AluSc SINE Alu -13 296 1 2330 116 135 5 chr18 12121613 12121992 -73866942 - MSTA LTR MaLR 0 428 1 22 35 0 0 chr18 12123332 12123361 -73865573 + AT_rich Low_complexity Low_complexity 1 29 0 2136 158 60 3 chr18 12123545 12123912 -73865022 + MLT1B LTR MaLR 1 388 -2 1212 264 75 52 chr18 12123921 12124278 -73864656 - L1MC4a LINE L1 -743 5403 5056 2020 119 3 53 chr18 12124278 12124597 -73864337 - AluSx SINE Alu -9 303 1 1212 264 75 52 chr18 12124597 12124899 -73864035 - L1MC4a LINE L1 -1090 5056 5264 1772 163 0 11 chr18 12124899 12125181 -73863753 - AluJb SINE Alu -2 310 32 1212 264 75 52 chr18 12125181 12125330 -73863604 - L1MC4a LINE L1 -881 5265 5121 972 242 44 133 chr18 12125435 12126022 -73862912 - MER21B LTR ERV1 -227 636 102 359 238 35 46 chr18 12125990 12126132 -73862802 - MER77 LTR ERV1 -398 207 23 * 1301 156 17 35 chr18 12126307 12126538 -73862396 - AluJo SINE Alu 0 312 86 17310 172 39 4 chr18 12126755 12132070 -73856864 - L1PBa LINE L1 -1315 5547 46 1222 109 0 0 chr18 12132071 12132246 -73856688 - MER41-int LTR ERV1 -2257 3689 3515 2079 152 42 17 chr18 12132246 12132602 -73856332 - MER34B LTR ERV1 -200 365 1 421 340 91 10 chr18 12132605 12132814 -73856120 + MIR SINE MIR 34 259 -3 287 306 90 0 chr18 12133226 12133337 -73855597 - L2 LINE L2 -4 3268 3148 312 342 68 5 chr18 12133426 12133616 -73855318 - MIR SINE MIR -17 245 44 1850 157 3 20 chr18 12133950 12134276 -73854658 - AluJo SINE Alu 0 312 1 1421 184 23 53 chr18 12135011 12135315 -73853619 - AluJo SINE Alu -17 295 1 794 277 131 46 chr18 12135731 12136242 -73852692 - MLT1H1 LTR MaLR 0 555 6 865 110 0 0 chr18 12136274 12136392 -73852542 - AluSg/x SINE Alu -15 295 178 469 307 101 21 chr18 12136533 12136722 -73852212 - MIR SINE MIR -2 260 88 2102 114 14 0 chr18 12136722 12137003 -73851931 + AluSx SINE Alu 1 285 -27 267 31 0 0 chr18 12137003 12137035 -73851899 + (CCAA)n Simple_repeat Simple_repeat 2 33 0 469 307 101 21 chr18 12137035 12137082 -73851852 - MIR SINE MIR -173 89 4 2519 51 3 3 chr18 12138893 12139185 -73849749 - AluY SINE Alu -19 292 1 1746 167 3 28 chr18 12139402 12139719 -73849215 + AluJb SINE Alu 1 309 -3 332 338 56 0 chr18 12140695 12140855 -73848079 - MARNA DNA Mariner -149 437 269 249 328 23 8 chr18 12141024 12141155 -73847779 + MIR SINE MIR 12 144 -118 189 0 0 0 chr18 12142039 12142060 -73846874 + (A)n Simple_repeat Simple_repeat 1 21 0 5745 31 6 0 chr18 12143681 12144350 -73844584 - L1PA3 LINE L1 0 6155 5483 467 98 24 12 chr18 12144950 12145032 -73843902 - AluJ/FRAM SINE Alu -10 302 220 1369 258 90 43 chr18 12146722 12147411 -73841523 + L1MEc LINE L1 1366 2086 -4310 243 350 28 21 chr18 12147505 12147648 -73841286 - MIR SINE MIR -50 212 69 189 74 0 0 chr18 12147766 12147793 -73841141 + (TA)n Simple_repeat Simple_repeat 1 27 0 2404 145 46 5 chr18 12147850 12148265 -73840669 + MSTB1 LTR MaLR 1 432 0 351 324 42 38 chr18 12149094 12149332 -73839602 + L2 LINE L2 1849 2087 -1227 253 215 46 15 chr18 12149772 12149837 -73839097 - Charlie4 DNA MER1_type -4 1957 1891 504 268 16 95 chr18 12149843 12150086 -73838848 - Charlie4 DNA MER1_type -1728 233 10 218 322 111 41 chr18 12150227 12150398 -73838536 + L2 LINE L2 2896 3078 -194 319 292 62 9 chr18 12151673 12151786 -73837148 + MIR3 SINE MIR 36 154 -54 2298 124 20 0 chr18 12153840 12154187 -73834747 + L1PA16 LINE L1 5793 6146 -20 207 0 0 0 chr18 12154187 12154210 -73834724 + (TA)n Simple_repeat Simple_repeat 2 24 0 2002 131 28 0 chr18 12154307 12154598 -73834336 - AluJb SINE Alu -13 299 1 1156 138 28 11 chr18 12154876 12155057 -73833877 + AluJo SINE Alu 119 302 -10 349 295 83 9 chr18 12155850 12156067 -73832867 - MIR SINE MIR -1 261 29 195 129 0 0 chr18 12156118 12156149 -73832785 + (T)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr18 12157976 12157997 -73830937 + AT_rich Low_complexity Low_complexity 1 21 0 349 164 14 0 chr18 12162360 12162433 -73826501 + L1PB4 LINE L1 6083 6156 0 2270 118 27 3 chr18 12164338 12164676 -73824258 - LTR24B LTR ERV1 -230 346 1 219 295 53 21 chr18 12165910 12166005 -73822929 + L3b LINE CR1 1331 1428 -155 466 258 187 47 chr18 12167614 12168021 -73820913 - L1MEd LINE L1 -5171 948 485 397 292 43 69 chr18 12168157 12168281 -73820653 - L1MEd LINE L1 -5824 295 178 2221 106 0 0 chr18 12168281 12168584 -73820350 - AluSx SINE Alu -9 303 1 397 292 43 69 chr18 12168584 12168692 -73820242 - L1MEd LINE L1 -5941 178 69 374 224 71 0 chr18 12168697 12168795 -73820139 - L2 LINE L2 -16 3297 3193 26 0 0 0 chr18 12169039 12169065 -73819869 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr18 12171494 12171517 -73817417 + AT_rich Low_complexity Low_complexity 1 23 0 411 231 39 31 chr18 12171891 12172021 -73816913 + MIR3 SINE MIR 53 183 -25 251 274 0 0 chr18 12174233 12174306 -73814628 + A-rich Low_complexity Low_complexity 2 74 0 305 304 93 37 chr18 12177483 12177644 -73811290 + MIR SINE MIR 28 197 -65 1929 120 3 46 chr18 12178112 12178437 -73810497 - AluSx SINE Alu -1 311 1 263 174 0 0 chr18 12178443 12178489 -73810445 - L2 LINE L2 0 3313 3268 1436 153 3 96 chr18 12181934 12182065 -73806869 + AluJo SINE Alu 1 88 -224 2168 100 0 16 chr18 12182065 12182375 -73806559 - AluY SINE Alu -6 305 1 1436 153 3 96 chr18 12182375 12182556 -73806378 + AluJo SINE Alu 88 284 -28 216 0 0 0 chr18 12182565 12182589 -73806345 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 1995 95 0 7 chr18 12183716 12184023 -73804911 - AluSx SINE Alu 0 305 1 1877 129 0 0 chr18 12184524 12184796 -73804138 + AluSx SINE Alu 1 272 -40 344 70 28 28 chr18 12184797 12184868 -73804066 + (GAAA)n Simple_repeat Simple_repeat 4 74 0 189 0 0 0 chr18 12185036 12185057 -73803877 + (CA)n Simple_repeat Simple_repeat 2 22 0 631 221 97 26 chr18 12185130 12185325 -73803609 + MER58A DNA MER1_type 1 209 -15 782 315 107 42 chr18 12185389 12185941 -73802993 + L1ME4a LINE L1 4749 5336 -810 239 266 63 38 chr18 12186114 12186193 -73802741 + L1ME4a LINE L1 5626 5706 -415 768 206 0 117 chr18 12186250 12186497 -73802437 - L1MA9 LINE L1 -38 6274 6057 324 224 61 10 chr18 12186500 12186598 -73802336 + L1ME4a LINE L1 5818 5920 -201 21 0 0 0 chr18 12186603 12186624 -73802310 + AT_rich Low_complexity Low_complexity 1 21 0 364 236 82 44 chr18 12186709 12186891 -73802043 + L1ME4a LINE L1 5933 6121 0 759 157 0 0 chr18 12188027 12188142 -73800792 + FLAM_C SINE Alu 4 118 -15 26 30 0 0 chr18 12188144 12188177 -73800757 + AT_rich Low_complexity Low_complexity 1 33 0 366 282 33 72 chr18 12188576 12188643 -73800291 - MIR SINE MIR -2 260 192 1569 209 64 22 chr18 12188643 12189002 -73799932 + MLT1A2 LTR MaLR 1 374 0 366 282 33 72 chr18 12189002 12189115 -73799819 - MIR SINE MIR -70 192 87 2289 82 3 13 chr18 12190218 12190533 -73798401 + AluSx SINE Alu 1 312 0 300 115 39 0 chr18 12190906 12190958 -73797976 + L1ME2 LINE L1 6078 6131 -33 350 279 58 91 chr18 12191016 12191224 -73797710 + L1MC4 LINE L1 7841 8041 -1 255 288 116 7 chr18 12191275 12191567 -73797367 + L1ME4a LINE L1 5793 6116 -5 229 196 10 176 chr18 12194650 12194695 -73794239 + MIR SINE MIR 113 133 -129 2190 94 3 3 chr18 12194695 12194992 -73793942 + AluSq SINE Alu 1 297 -16 229 196 10 176 chr18 12194992 12195048 -73793886 + MIR SINE MIR 133 197 -65 2413 164 40 24 chr18 12197142 12197397 -73791537 + L1MB4 LINE L1 5666 5915 -265 2365 105 73 15 chr18 12197397 12197740 -73791194 + THE1B LTR MaLR 2 364 0 2413 164 40 24 chr18 12197740 12197990 -73790944 + L1MB4 LINE L1 5915 6179 -1 22 0 0 0 chr18 12198313 12198335 -73790599 + AT_rich Low_complexity Low_complexity 1 22 0 183 129 0 0 chr18 12198586 12198617 -73790317 + (CA)n Simple_repeat Simple_repeat 1 31 0 293 244 12 12 chr18 12198628 12198714 -73790220 + GA-rich Low_complexity Low_complexity 1 86 0 313 228 164 0 chr18 12198947 12199076 -73789858 - MIR SINE MIR -63 145 29 2334 70 7 7 chr18 12200990 12201292 -73787642 + AluSp SINE Alu 1 302 -11 352 308 19 10 chr18 12202730 12202834 -73786100 + L1MC4 LINE L1 6598 6702 -1340 * 388 304 0 0 chr18 12202744 12202836 -73786098 - L1MC4 LINE L1 -1336 6706 6615 301 211 56 14 chr18 12202826 12202897 -73786037 - L1MCa LINE L1 -4358 2068 1995 * 347 337 0 0 chr18 12202869 12202958 -73785976 + L1MC4 LINE L1 6614 6702 -1340 * 352 262 71 0 chr18 12202883 12202967 -73785967 - L1MC4 LINE L1 -1339 6703 6614 234 150 0 0 chr18 12202967 12203007 -73785927 + (CA)n Simple_repeat Simple_repeat 2 41 0 1710 171 10 0 chr18 12203160 12203452 -73785482 - AluJo SINE Alu -17 295 1 213 277 84 12 chr18 12204067 12204150 -73784784 + MIR SINE MIR 42 130 -78 1841 145 0 0 chr18 12205038 12205342 -73783592 + AluSx SINE Alu 1 304 0 1110 220 13 17 chr18 12205555 12205787 -73783147 + LTR40c LTR ERVL 4 234 -231 981 171 64 0 chr18 12205869 12206056 -73782878 + LTR40b LTR ERVL 240 438 -24 2055 125 3 10 chr18 12209062 12209375 -73779559 + AluSx SINE Alu 1 311 -1 251 345 42 0 chr18 12209504 12209623 -73779311 - MIR SINE MIR -66 196 73 260 231 13 0 chr18 12210779 12210857 -73778077 + (TA)n Simple_repeat Simple_repeat 2 80 0 1308 176 12 25 chr18 12210857 12211101 -73777833 - AluJo SINE Alu -26 286 46 846 212 135 74 chr18 12211684 12212047 -73776887 + MLT1C LTR MaLR 1 385 -82 428 264 16 60 chr18 12212044 12212226 -73776708 + MLT1C LTR MaLR 286 459 -8 * 3876 156 26 12 chr18 12212996 12213687 -73775247 + L1MB3 LINE L1 5481 6181 -2 657 319 17 28 chr18 12213697 12214058 -73774876 + L1ME3A LINE L1 5595 5951 -219 25 95 0 0 chr18 12214211 12214285 -73774649 + AT_rich Low_complexity Low_complexity 1 74 0 202 229 0 0 chr18 12214786 12214834 -73774100 + A-rich Low_complexity Low_complexity 1 48 0 390 256 15 64 chr18 12215243 12215387 -73773547 + MIR SINE MIR 58 191 -68 204 260 78 13 chr18 12215426 12215503 -73773431 + MIR3 SINE MIR 112 193 -15 2012 206 60 19 chr18 12215513 12215998 -73772936 + MLT1D LTR MaLR 1 505 0 2569 93 35 11 chr18 12216722 12217088 -73771846 + THE1C LTR MaLR 1 375 0 218 114 0 45 chr18 12217088 12217132 -73771802 + (GGGAGA)n Simple_repeat Simple_repeat 5 46 0 2258 111 0 0 chr18 12218623 12218911 -73770023 + AluSx SINE Alu 1 288 -24 2343 71 0 3 chr18 12219375 12219688 -73769246 + AluSc SINE Alu 1 312 0 1755 154 0 35 chr18 12220138 12220450 -73768484 - AluJo SINE Alu -11 301 1 2549 49 0 10 chr18 12222464 12222768 -73766166 + AluY SINE Alu 1 301 -10 2034 136 77 3 chr18 12222779 12223118 -73765816 + MER47A DNA MER2_type 2 365 -1 723 158 116 7 chr18 12223125 12223285 -73765649 + MER104 DNA Tc2 1 179 -1 202 250 29 15 chr18 12223548 12223616 -73765318 + MIR SINE MIR 59 127 -135 555 194 37 8 chr18 12224526 12224660 -73764274 - MER5B DNA MER1_type -27 151 14 627 226 82 7 chr18 12225166 12225312 -73763622 + MER20 DNA MER1_type 63 219 0 2105 114 14 0 chr18 12225698 12226001 -73762933 + AluSx SINE Alu 1 307 0 1795 125 60 29 chr18 12226992 12227115 -73761819 + AluJb SINE Alu 1 119 -193 180 0 0 0 chr18 12227115 12227135 -73761799 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1795 125 60 29 chr18 12227135 12227292 -73761642 + AluJb SINE Alu 119 290 -22 2256 117 0 0 chr18 12227394 12227685 -73761249 + AluSx SINE Alu 1 291 -21 2300 105 0 0 chr18 12227801 12228109 -73760825 - AluSq SINE Alu 0 308 1 2462 67 0 3 chr18 12228140 12228438 -73760496 - AluY SINE Alu -14 297 1 1832 226 40 2 chr18 12229241 12229671 -73759263 + L1M4 LINE L1 4797 5242 -904 1269 218 8 8 chr18 12229689 12229941 -73758993 + AluJo SINE Alu 39 290 -22 1423 131 39 74 chr18 12230014 12230297 -73758637 + AluJb SINE Alu 16 288 -24 2439 87 0 3 chr18 12230319 12230630 -73758304 + AluSx SINE Alu 1 310 -2 269 265 61 20 chr18 12230876 12230974 -73757960 + HAL1b LINE L1 372 473 -875 384 167 0 0 chr18 12231435 12231507 -73757427 + GA-rich Low_complexity Low_complexity 2 73 0 4766 151 21 8 chr18 12231734 12232555 -73756379 + L1PB4 LINE L1 5326 6156 0 258 178 89 33 chr18 12232566 12232656 -73756278 + L2 LINE L2 2568 2662 -652 473 187 0 11 chr18 12232656 12232747 -73756187 + MLT1A2 LTR MaLR 1 90 -284 207 0 0 0 chr18 12232861 12232884 -73756050 + (TC)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr18 12233010 12233031 -73755903 + AT_rich Low_complexity Low_complexity 1 21 0 432 0 0 0 chr18 12233069 12233117 -73755817 + (T)n Simple_repeat Simple_repeat 1 48 0 1250 175 108 30 chr18 12233519 12233816 -73755118 - LTR40b LTR ERVL 0 462 143 2117 105 37 14 chr18 12233902 12234197 -73754737 + AluSx SINE Alu 1 302 -10 1013 259 109 17 chr18 12234593 12235014 -73753920 + L2 LINE L2 2316 2775 -539 411 189 27 0 chr18 12235017 12235091 -73753843 + FRAM/FAM SINE Alu 1 75 -91 264 122 0 0 chr18 12235092 12235133 -73753801 + (GGA)n Simple_repeat Simple_repeat 3 43 0 2189 129 0 0 chr18 12235366 12235668 -73753266 - AluSx SINE Alu -10 302 1 498 265 49 34 chr18 12235668 12235872 -73753062 + L2 LINE L2 3107 3313 0 1961 151 16 0 chr18 12236230 12236535 -73752399 + AluSq SINE Alu 1 310 -3 1677 157 7 31 chr18 12236593 12236904 -73752030 - AluJb SINE Alu 0 312 21 961 97 0 0 chr18 12237048 12237172 -73751762 + AluSq/x SINE Alu 9 132 -181 2211 116 7 3 chr18 12237174 12237477 -73751457 + AluSq SINE Alu 1 304 -9 186 43 0 0 chr18 12237990 12238013 -73750921 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 276 329 169 18 chr18 12238021 12238240 -73750694 - MIR SINE MIR -2 260 9 722 161 121 13 chr18 12238394 12238543 -73750391 - FRAM SINE Alu -1 165 1 317 240 8 48 chr18 12239451 12239576 -73749358 + MER113 DNA MER1_type? 3 122 -399 220 208 0 0 chr18 12239638 12239691 -73749243 + T-rich Low_complexity Low_complexity 4 56 0 2056 104 80 3 chr18 12239739 12240027 -73748907 - AluSx SINE Alu -2 310 1 240 218 26 51 chr18 12240075 12240153 -73748781 + MER110 LTR ERV1 87 162 -329 * 353 275 104 52 chr18 12240134 12240327 -73748607 + MER110 LTR ERV1 80 282 -209 639 165 0 0 chr18 12240342 12240445 -73748489 - FLAM_C SINE Alu -34 109 7 203 125 83 0 chr18 12240456 12240504 -73748430 + T-rich Low_complexity Low_complexity 2 53 0 2131 121 0 0 chr18 12241103 12241410 -73747524 - AluSq SINE Alu 0 307 1 803 204 19 0 chr18 12241506 12241663 -73747271 + FRAM SINE Alu 5 164 -2 392 268 55 16 chr18 12241758 12241885 -73747049 - MIR SINE MIR -74 188 57 1735 148 74 0 chr18 12242535 12242818 -73746116 - AluJo SINE Alu -7 305 2 2456 94 0 0 chr18 12243136 12243443 -73745491 + AluSp SINE Alu 1 307 -6 1905 117 78 0 chr18 12243455 12243737 -73745197 + AluSx SINE Alu 1 304 -8 223 188 38 12 chr18 12243737 12243817 -73745117 + (TA)n Simple_repeat Simple_repeat 1 82 0 521 231 32 75 chr18 12243885 12244025 -73744909 + MER112 DNA MER1_type 1 134 -126 1981 142 7 0 chr18 12244025 12244340 -73744594 - AluSx SINE Alu 0 317 1 521 231 32 75 chr18 12244340 12244384 -73744550 + MER112 DNA MER1_type 134 178 -82 1380 140 36 16 chr18 12244426 12244676 -73744258 - L1MB1 LINE L1 -8 6160 5906 25 0 0 0 chr18 12244704 12244729 -73744205 + AT_rich Low_complexity Low_complexity 1 25 0 2045 134 0 0 chr18 12244729 12245021 -73743913 - AluSx SINE Alu -20 292 1 1143 81 0 0 chr18 12245046 12245182 -73743752 + AluSq/x SINE Alu 1 136 -177 2149 107 0 0 chr18 12245182 12245485 -73743449 + AluSg SINE Alu 1 303 0 2477 87 0 3 chr18 12246370 12246680 -73742254 - AluSc SINE Alu 0 309 1 1900 130 58 7 chr18 12247934 12248227 -73740707 - AluJb SINE Alu -4 308 1 1254 313 90 39 chr18 12248304 12248593 -73740341 - L2 LINE L2 -5 3308 3035 2100 122 7 0 chr18 12248593 12248881 -73740053 + AluSx SINE Alu 12 301 -11 1254 313 90 39 chr18 12248881 12249731 -73739203 - L2 LINE L2 -278 3035 2096 2046 141 3 3 chr18 12249731 12250035 -73738899 + AluJb SINE Alu 6 309 -3 1254 313 90 39 chr18 12250035 12250180 -73738754 - L2 LINE L2 -1217 2096 1960 2140 132 3 0 chr18 12250380 12250684 -73738250 - AluSx SINE Alu -7 305 1 1074 110 0 20 chr18 12250684 12250830 -73738104 - AluSq/x SINE Alu -170 143 1 614 181 47 8 chr18 12251104 12251231 -73737703 - FLAM_A SINE Alu -1 132 1 2487 94 0 0 chr18 12251311 12251620 -73737314 - AluSc SINE Alu 0 309 1 1691 164 31 0 chr18 12251621 12251908 -73737026 - AluJo SINE Alu -16 296 1 2395 81 0 0 chr18 12252822 12253117 -73735817 - AluSx SINE Alu -17 295 1 2160 93 0 66 chr18 12253440 12253773 -73735161 - AluSx SINE Alu -1 311 1 285 29 0 0 chr18 12253975 12253983 -73734951 + (TG)n Simple_repeat Simple_repeat 1 42 0 285 29 0 0 chr18 12253983 12254017 -73734917 + (TG)n Simple_repeat Simple_repeat 1 34 0 1151 149 69 5 chr18 12254153 12254371 -73734563 - AluJb SINE Alu 0 314 85 191 227 15 0 chr18 12254374 12254440 -73734494 + (TA)n Simple_repeat Simple_repeat 2 68 0 26 30 0 0 chr18 12254559 12254592 -73734342 + AT_rich Low_complexity Low_complexity 1 33 0 209 309 54 40 chr18 12254743 12254892 -73734042 - L2 LINE L2 0 3313 3163 21 0 0 0 chr18 12256297 12256318 -73732616 + AT_rich Low_complexity Low_complexity 1 21 0 2096 120 0 13 chr18 12256405 12256721 -73732213 + AluSp SINE Alu 1 312 -1 1996 92 0 32 chr18 12256780 12257061 -73731873 - AluY SINE Alu -39 272 1 225 0 0 0 chr18 12257225 12257250 -73731684 + (A)n Simple_repeat Simple_repeat 1 25 0 2477 87 0 3 chr18 12258504 12258814 -73730120 + AluSc SINE Alu 1 309 0 2148 107 0 0 chr18 12259698 12260001 -73728933 - AluSg SINE Alu 0 303 1 958 120 0 8 chr18 12260001 12260134 -73728800 - AluSq/x SINE Alu -176 136 5 1464 182 10 34 chr18 12260382 12260678 -73728256 - AluJo SINE Alu -23 289 1 2571 138 46 11 chr18 12260680 12261114 -73727820 - L1PA16 LINE L1 -9 6157 5709 1392 153 108 22 chr18 12261163 12261431 -73727503 - AluJb SINE Alu -21 291 1 308 248 112 44 chr18 12261625 12261915 -73727019 + L1M1 LINE L1 5318 5570 -599 905 153 0 0 chr18 12262038 12262175 -73726759 + FRAM SINE Alu 1 137 -39 21 0 0 0 chr18 12262480 12262501 -73726433 + AT_rich Low_complexity Low_complexity 1 21 0 2252 117 0 0 chr18 12262503 12262802 -73726132 + AluSx SINE Alu 1 299 -13 1203 170 30 128 chr18 12263214 12263619 -73725315 - MLT1A1 LTR MaLR 0 365 1 1654 154 25 21 chr18 12263705 12264112 -73724822 - AluJb SINE Alu 0 408 1 1821 41 0 14 chr18 12264673 12264891 -73724043 - AluY SINE Alu -6 305 91 1027 199 47 9 chr18 12265982 12266193 -73722741 - MER45B DNA AcHobo -519 521 303 181 118 59 0 chr18 12266259 12266293 -73722641 + L2 LINE L2 3266 3301 -12 2381 79 0 41 chr18 12266415 12266732 -73722202 - AluY SINE Alu -2 309 6 279 289 96 58 chr18 12266794 12266898 -73722036 + L2 LINE L2 3149 3256 -16 2327 95 0 0 chr18 12267030 12267326 -73721608 - AluSg SINE Alu -14 296 1 5008 37 3 0 chr18 12267797 12268393 -73720541 + L1PA5 LINE L1 5553 6150 -4 21 0 0 0 chr18 12268421 12268442 -73720492 + AT_rich Low_complexity Low_complexity 1 21 0 289 237 0 26 chr18 12268530 12268644 -73720290 + CT-rich Low_complexity Low_complexity 1 111 0 1963 168 0 3 chr18 12268789 12269087 -73719847 - AluJo SINE Alu -15 297 1 240 238 48 0 chr18 12269929 12269992 -73718942 + MIR3 SINE MIR 125 190 -18 365 248 83 45 chr18 12270525 12270658 -73718276 + L2 LINE L2 3176 3313 0 678 268 154 12 chr18 12271171 12271592 -73717342 - L1ME4a LINE L1 -2 6119 5639 315 309 130 10 chr18 12271604 12271811 -73717123 - L1ME4a LINE L1 -531 5590 5359 215 314 0 23 chr18 12272476 12272562 -73716372 - MIR SINE MIR 0 262 179 195 42 0 0 chr18 12273706 12273730 -73715204 + (ATG)n Simple_repeat Simple_repeat 3 26 0 680 224 153 54 chr18 12273733 12273804 -73715130 - MIR SINE MIR -8 254 191 2990 159 39 45 chr18 12273804 12274419 -73714515 + LTR9 LTR ERV1 2 612 0 4312 90 15 0 chr18 12274429 12275020 -73713914 - MER4A LTR ERV1 0 600 1 680 224 153 54 chr18 12275020 12275160 -73713774 - MIR SINE MIR -79 183 10 631 261 198 18 chr18 12275168 12275502 -73713432 + MLT1L LTR MaLR 222 615 0 343 322 42 0 chr18 12275598 12275716 -73713218 - L2 LINE L2 -1 3312 3190 2549 46 3 0 chr18 12275948 12276253 -73712681 - AluY SINE Alu -5 306 1 310 245 130 16 chr18 12276788 12276972 -73711962 - L1MC5 LINE L1 -44 7917 7713 291 257 138 28 chr18 12278405 12278514 -73710420 + MIR SINE MIR 28 148 -114 209 280 93 0 chr18 12278529 12278604 -73710330 - L2 LINE L2 -1 3271 3190 * 224 319 168 0 chr18 12278602 12278721 -73710213 - MIR SINE MIR 0 262 124 356 339 124 30 chr18 12278895 12279290 -73709644 - L2 LINE L2 -343 2971 2540 264 250 0 0 chr18 12279409 12279489 -73709445 + CT-rich Low_complexity Low_complexity 2 81 0 347 268 146 28 chr18 12279559 12279880 -73709054 - L1ME4a LINE L1 -6 6115 5757 328 184 147 37 chr18 12280097 12280206 -73708728 + MIR SINE MIR 75 195 -67 349 174 14 14 chr18 12280371 12280440 -73708494 - Tigger5 DNA MER2_type 0 2323 2255 251 308 0 13 chr18 12280483 12280561 -73708373 - Tigger5 DNA MER2_type -2246 77 1 305 239 28 21 chr18 12280658 12280800 -73708134 - L1ME LINE L1 -5384 686 544 680 195 67 46 chr18 12280817 12281012 -73707922 - L1ME LINE L1 -5575 495 297 489 198 66 72 chr18 12281013 12281180 -73707754 - L1ME LINE L1 -5846 224 59 1731 178 95 60 chr18 12281397 12281881 -73707053 - MLT1D LTR MaLR -4 501 1 190 250 69 0 chr18 12282305 12282377 -73706557 - MIR SINE MIR -117 145 69 537 288 68 31 chr18 12283126 12283348 -73705586 + MIR SINE MIR 12 241 -21 2406 90 3 0 chr18 12283447 12283747 -73705187 - AluSx SINE Alu -11 301 1 427 294 78 21 chr18 12284374 12284573 -73704361 + MIR SINE MIR 7 219 -43 1779 174 3 0 chr18 12285278 12285565 -73703369 - AluJb SINE Alu -24 288 1 279 292 211 38 chr18 12285912 12286097 -73702837 + MIR SINE MIR 19 235 -27 485 223 15 68 chr18 12286115 12286188 -73702746 - MIR SINE MIR 0 262 187 2161 124 0 0 chr18 12286188 12286486 -73702448 - AluSx SINE Alu -14 298 1 485 223 15 68 chr18 12286486 12286604 -73702330 - MIR SINE MIR -75 187 1 266 210 16 0 chr18 12286645 12286707 -73702227 - HsTC2 DNA Tc2 -1831 67 5 2305 107 0 0 chr18 12286775 12287074 -73701860 - AluSg SINE Alu -11 299 1 2198 128 0 3 chr18 12287236 12287541 -73701393 - AluSx SINE Alu -8 304 1 281 173 39 0 chr18 12287844 12287896 -73701038 + MIR SINE MIR 117 170 -92 641 172 258 0 chr18 12288139 12288290 -73700644 - LTR40a LTR ERVL -2 517 328 1415 172 182 28 chr18 12288312 12288708 -73700226 + LTR2B LTR ERV1 34 490 0 279 238 40 10 chr18 12288827 12288928 -73700006 - LTR40a LTR ERVL -414 105 2 180 0 0 0 chr18 12289203 12289223 -73699711 + (T)n Simple_repeat Simple_repeat 1 20 0 378 316 81 15 chr18 12289302 12289438 -73699496 - MIR SINE MIR -71 191 47 330 209 85 54 chr18 12289895 12290024 -73698910 - L1ME4a LINE L1 -21 6100 5968 269 284 78 41 chr18 12290127 12290332 -73698602 - L1ME4a LINE L1 -296 5825 5606 2316 101 0 3 chr18 12290332 12290630 -73698304 + AluSp SINE Alu 1 297 -16 269 284 78 41 chr18 12290630 12290692 -73698242 - L1ME4a LINE L1 -515 5606 5548 2294 91 0 3 chr18 12291796 12292092 -73696842 - AluSc SINE Alu -14 295 1 278 282 169 8 chr18 12292312 12292436 -73696498 + MIR3 SINE MIR 1 144 -64 24 0 0 0 chr18 12293573 12293597 -73695337 + AT_rich Low_complexity Low_complexity 1 24 0 225 0 0 0 chr18 12293907 12293932 -73695002 + (T)n Simple_repeat Simple_repeat 1 25 0 610 195 71 0 chr18 12296064 12296177 -73692757 + FLAM_A SINE Alu 3 123 -10 27 29 0 0 chr18 12298468 12298502 -73690432 + AT_rich Low_complexity Low_complexity 1 34 0 1648 160 13 26 chr18 12298576 12298882 -73690052 - AluJo SINE Alu -10 302 1 471 146 37 0 chr18 12299275 12299357 -73689577 - AluJo SINE Alu -7 305 221 754 142 15 8 chr18 12299380 12299514 -73689420 - AluJo SINE Alu -177 135 1 2271 81 0 37 chr18 12299519 12299841 -73689093 - AluY SINE Alu -1 310 1 21 36 0 0 chr18 12299884 12299912 -73689022 + AT_rich Low_complexity Low_complexity 1 28 0 422 303 54 25 chr18 12300568 12300809 -73688125 - L1M4 LINE L1 -3147 2999 2752 511 256 200 10 chr18 12301371 12301566 -73687368 - MIR SINE MIR 0 262 31 909 132 0 0 chr18 12301747 12301868 -73687066 + FLAM_C SINE Alu 2 122 -21 1135 300 123 46 chr18 12302097 12302545 -73686389 - L3 LINE CR1 -20 1557 1042 2149 113 0 28 chr18 12302545 12302865 -73686069 - AluY SINE Alu 0 311 1 1135 300 123 46 chr18 12302865 12303069 -73685865 - L3 LINE CR1 -535 1042 855 191 398 43 11 chr18 12303428 12303521 -73685413 - L3 LINE CR1 -1189 388 293 2141 109 0 11 chr18 12304049 12304334 -73684600 - AluSx SINE Alu -30 282 1 766 306 232 5 chr18 12304481 12305007 -73683927 - L2 LINE L2 -4 3309 2661 913 251 70 17 chr18 12305023 12305310 -73683624 - L2 LINE L2 -842 2472 2171 1971 157 94 15 chr18 12306030 12306432 -73682502 - Tigger2a DNA MER2_type 0 434 1 1833 182 7 0 chr18 12307688 12307984 -73680950 + AluJb SINE Alu 1 298 -14 220 379 78 0 chr18 12308915 12309031 -73679903 + MIR SINE MIR 90 214 -48 189 0 0 0 chr18 12309848 12309869 -73679065 + (T)n Simple_repeat Simple_repeat 1 21 0 1457 123 126 4 chr18 12310613 12310874 -73678060 + AluJo SINE Alu 1 293 -19 648 36 24 0 chr18 12311208 12311292 -73677642 + AluYa5/8 SINE Alu 216 301 -9 1984 149 0 0 chr18 12511380 12511669 -73477265 - AluSx SINE Alu -23 289 1 245 343 48 0 chr18 12512519 12512624 -73476310 + MER91C DNA MER1_type 1 110 -30 192 270 0 63 chr18 12516718 12516781 -73472153 + L2 LINE L2 3160 3218 -95 257 280 33 60 chr18 12517653 12517835 -73471099 - L1MC4a LINE L1 -1755 6053 5877 256 280 150 40 chr18 12518034 12518134 -73470800 - L2 LINE L2 0 3272 3162 2020 120 3 20 chr18 12518204 12518505 -73470429 + AluSx SINE Alu 1 296 -16 604 284 105 26 chr18 12520329 12521024 -73467910 - L1MC4a LINE L1 -410 5711 4960 558 312 114 10 chr18 12521082 12521380 -73467554 + L1ME4a LINE L1 5563 5891 -230 284 200 110 0 chr18 12521447 12521547 -73467387 + L1ME4a LINE L1 6007 6117 -4 14484 146 75 10 chr18 12521802 12524332 -73464602 + Tigger2 DNA MER2_type 26 2718 0 468 266 43 41 chr18 12525016 12525222 -73463712 + MIR SINE MIR 10 216 -46 1656 167 34 3 chr18 12526426 12526719 -73462215 - AluJo SINE Alu -1 311 10 309 237 21 31 chr18 12527034 12527131 -73461803 + L1ME LINE L1 5636 5731 -390 351 239 159 22 chr18 12527131 12527269 -73461665 + HAL1 LINE L1 37 193 -2314 738 223 129 16 chr18 12527271 12527464 -73461470 - MER58C DNA MER1_type 0 215 1 345 301 128 0 chr18 12527535 12527691 -73461243 + HAL1 LINE L1 271 446 -2061 183 305 99 107 chr18 12527994 12528125 -73460809 - L2 LINE L2 -2 3270 3141 318 273 94 101 chr18 12528217 12528623 -73460311 - L2 LINE L2 -785 2529 2127 432 219 68 68 chr18 12528973 12529119 -73459815 - MER69A DNA AcHobo -3 174 29 249 346 48 0 chr18 12529230 12529334 -73459600 + L2 LINE L2 3191 3299 -14 270 297 139 36 chr18 12530487 12530817 -73458117 + HAL1b LINE L1 438 801 -547 752 136 0 8 chr18 12530903 12531021 -73457913 + AluSq/x SINE Alu 1 117 -196 1264 49 6 12 chr18 12531026 12531190 -73457744 - AluY SINE Alu -17 294 132 254 182 130 13 chr18 12531835 12531912 -73457022 + L1P LINE L1 3187 3272 -2874 301 248 147 23 chr18 12532305 12532434 -73456500 + L1ME LINE L1 5461 5605 -516 441 226 170 0 chr18 12532723 12532829 -73456105 + FLAM_A SINE Alu 1 124 -9 1995 134 7 3 chr18 12532958 12533257 -73455677 + AluJb SINE Alu 1 300 -12 259 251 108 54 chr18 12533570 12533773 -73455161 - L1MC4 LINE L1 -3 8039 7826 407 168 42 84 chr18 12533846 12533909 -73455025 - L1ME2 LINE L1 -63 6101 6044 2158 120 0 3 chr18 12533909 12534210 -73454724 + AluSq SINE Alu 1 300 -13 407 168 42 84 chr18 12534210 12534265 -73454669 - L1ME2 LINE L1 -120 6044 5988 899 293 108 43 chr18 12534273 12535093 -73453841 + L1MC4 LINE L1 7168 8041 -1 821 223 40 90 chr18 12535105 12535428 -73453506 + L1MC5 LINE L1 6650 6956 -1005 9553 211 94 45 chr18 12535444 12537304 -73451630 - L1MA4A LINE L1 -4 7001 5233 180 0 0 0 chr18 12537304 12537324 -73451610 + (TTG)n Simple_repeat Simple_repeat 2 21 0 9553 211 94 45 chr18 12537324 12538416 -73450518 - L1MA4A LINE L1 -1772 5233 4195 2190 116 0 28 chr18 12538416 12538735 -73450199 - AluSx SINE Alu -2 310 1 9553 211 94 45 chr18 12538735 12539314 -73449620 - L1MA4A LINE L1 -2810 4195 3646 2243 98 7 0 chr18 12539314 12539611 -73449323 + AluY SINE Alu 2 300 -11 9553 211 94 45 chr18 12539611 12540615 -73448319 - L1MA4A LINE L1 -3359 3646 2692 1912 145 0 7 chr18 12540615 12540919 -73448015 - AluSx SINE Alu -10 302 1 9553 211 94 45 chr18 12540919 12542899 -73446035 - L1MA4A LINE L1 -4313 2692 12 1135 249 70 61 chr18 12542907 12542989 -73445945 + L1MC5 LINE L1 6952 7032 -929 413 282 120 0 chr18 12542989 12543106 -73445828 + FLAM_A SINE Alu 1 131 -2 1135 249 70 61 chr18 12543106 12543597 -73445337 + L1MC5 LINE L1 7032 7530 -431 425 260 89 72 chr18 12544318 12544553 -73444381 + HAL1 LINE L1 1114 1352 -1155 236 291 189 14 chr18 12544653 12544801 -73444133 + HAL1 LINE L1 1488 1661 -846 259 218 30 50 chr18 12544809 12544910 -73444024 + L1MC4a LINE L1 5950 6048 -1760 257 270 127 24 chr18 12544975 12545101 -73443833 + L1MC5 LINE L1 7714 7852 -109 246 325 120 0 chr18 12545221 12545338 -73443596 + L1ME LINE L1 5695 5825 -296 578 326 105 48 chr18 12545749 12546368 -73442566 + L2 LINE L2 1864 2517 -797 331 275 22 11 chr18 12546347 12546438 -73442496 - L2 LINE L2 -1 3312 3221 * 1997 134 0 10 chr18 12546607 12546905 -73442029 + AluJb SINE Alu 1 295 -17 368 181 14 14 chr18 12547878 12547950 -73440984 - MER5C DNA MER1_type -249 75 4 1868 84 42 39 chr18 12551622 12551907 -73437027 + AluSq SINE Alu 5 290 -23 248 259 86 0 chr18 12551958 12552039 -73436895 + HAL1 LINE L1 1562 1649 -858 693 211 0 0 chr18 12552126 12552249 -73436685 - FLAM_A SINE Alu -10 123 1 1670 163 0 36 chr18 12552933 12553239 -73435695 + AluJb SINE Alu 1 295 -17 285 291 47 23 chr18 12553688 12553774 -73435160 + MIR SINE MIR 6 93 -169 268 234 94 0 chr18 12554554 12554618 -73434316 - MIR SINE MIR -30 232 163 243 0 0 0 chr18 12554911 12554938 -73433996 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1625 156 11 7 chr18 12554976 12555252 -73433682 + AluJo SINE Alu 14 290 -22 390 200 33 53 chr18 12555388 12555538 -73433396 - L1MC5 LINE L1 -425 7536 7390 1865 104 59 4 chr18 12555548 12555853 -73433081 - AluSq SINE Alu 0 320 1 427 157 248 0 chr18 12556218 12556339 -73432595 - Tigger8 DNA MER2_type -183 483 333 191 179 0 0 chr18 12556841 12556869 -73432065 - MIR SINE MIR -17 245 218 614 135 42 0 chr18 12557415 12557511 -73431423 - HY3 scRNA scRNA 0 101 2 220 299 206 0 chr18 12557705 12557812 -73431122 + MIR SINE MIR 26 154 -108 616 140 0 0 chr18 12557875 12557975 -73430959 + HY3 scRNA scRNA 1 100 -1 188 338 66 72 chr18 12558118 12558202 -73430732 - L2 LINE L2 -699 2615 2532 1840 152 10 3 chr18 12558202 12558491 -73430443 + AluJo SINE Alu 1 291 -21 188 338 66 72 chr18 12558491 12558740 -73430194 - L2 LINE L2 -782 2532 2284 21 36 0 0 chr18 12558826 12558854 -73430080 + AT_rich Low_complexity Low_complexity 1 28 0 2198 113 3 0 chr18 12559277 12559579 -73429355 + AluSx SINE Alu 1 303 -9 22 0 0 0 chr18 12559583 12559605 -73429329 + AT_rich Low_complexity Low_complexity 1 22 0 867 145 8 0 chr18 12560449 12560580 -73428354 + AluJb SINE Alu 2 133 -179 198 191 0 0 chr18 12560770 12560817 -73428117 + (TA)n Simple_repeat Simple_repeat 2 48 0 3230 149 58 3 chr18 12560846 12561449 -73427485 - L1MA4 LINE L1 -9 6291 5656 1602 128 52 0 chr18 12561449 12561698 -73427236 + L1M1 LINE L1 5452 5713 -592 254 202 0 71 chr18 12562432 12562531 -73426403 + A-rich Low_complexity Low_complexity 2 93 0 222 256 26 0 chr18 12564074 12564152 -73424782 + A-rich Low_complexity Low_complexity 3 82 0 369 136 0 0 chr18 12566729 12566788 -73422146 - Charlie5 DNA MER1_type 0 2623 2565 24 0 0 0 chr18 12567431 12567455 -73421479 + AT_rich Low_complexity Low_complexity 1 24 0 337 295 44 6 chr18 12567538 12567681 -73421253 + MIR SINE MIR 63 217 -45 450 164 0 0 chr18 12568050 12568117 -73420817 + AluJ/FLAM SINE Alu 23 89 -223 209 313 144 19 chr18 12568533 12568789 -73420145 + L2 LINE L2 2177 2464 -850 393 181 138 43 chr18 12569059 12569197 -73419737 + MER103 DNA DNA 3 153 -13 297 24 24 0 chr18 12569410 12569451 -73419483 - MADE1 DNA Mariner -37 43 2 230 333 0 50 chr18 12569558 12569657 -73419277 + L2 LINE L2 2990 3083 -189 299 191 15 0 chr18 12569821 12569889 -73419045 - L1MC5 LINE L1 -518 7443 7375 206 0 0 65 chr18 12570204 12570235 -73418699 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1699 150 0 60 chr18 12570243 12570543 -73418391 - AluJo SINE Alu -30 282 1 2317 130 3 0 chr18 12570553 12570861 -73418073 - AluSg SINE Alu -1 309 1 369 232 89 0 chr18 12572300 12572412 -73416522 - Charlie4 DNA MER1_type -4 1957 1836 741 41 0 0 chr18 12572623 12572720 -73416214 + L1PA4 LINE L1 2 98 -6048 38790 42 7 3 chr18 12572721 12578547 -73410387 + L1PA4 LINE L1 317 6155 0 780 178 63 82 chr18 12578813 12578843 -73410091 - Charlie4 DNA MER1_type -1670 291 262 1752 149 23 55 chr18 12578843 12579024 -73409910 - AluJb SINE Alu -13 299 131 1932 87 65 7 chr18 12579024 12579299 -73409635 + AluY SINE Alu 2 292 -19 1752 149 23 55 chr18 12579299 12579426 -73409508 - AluJb SINE Alu -181 131 1 780 178 63 82 chr18 12579426 12579665 -73409269 - Charlie4 DNA MER1_type -1699 262 27 2304 108 3 0 chr18 12580049 12580354 -73408580 + AluSx SINE Alu 1 306 -6 1447 193 27 0 chr18 12581194 12581495 -73407439 + L1MB7 LINE L1 5433 5741 -437 300 132 19 0 chr18 12581495 12581548 -73407386 - MER34 LTR ERV1 0 542 489 270 259 0 0 chr18 12581554 12581608 -73407326 - AluJ/monomer SINE Alu -248 54 1 1137 232 61 35 chr18 12581645 12582054 -73406880 - MER34 LTR ERV1 -72 635 1 1744 158 53 42 chr18 12582056 12582436 -73406498 + L1MB7 LINE L1 5740 6123 -61 1517 173 11 29 chr18 12582670 12582948 -73405986 + AluJo SINE Alu 1 273 -39 1699 178 7 30 chr18 12582951 12583249 -73405685 + AluJb SINE Alu 1 291 -21 22 35 0 0 chr18 12583988 12584017 -73404917 + AT_rich Low_complexity Low_complexity 1 29 0 201 296 0 19 chr18 12584122 12584176 -73404758 + MIR3 SINE MIR 108 160 -48 2060 132 7 0 chr18 12584205 12584501 -73404433 + AluJb SINE Alu 5 302 -10 912 156 0 36 chr18 12584919 12585086 -73403848 + AluJo SINE Alu 118 278 -34 2678 39 3 0 chr18 12585086 12585395 -73403539 - AluY SINE Alu -1 310 1 22 35 0 0 chr18 12585420 12585449 -73403485 + AT_rich Low_complexity Low_complexity 1 29 0 454 208 30 0 chr18 12585747 12585848 -73403086 + U13 snRNA snRNA 1 104 0 2041 109 46 0 chr18 12586285 12586569 -73402365 + AluSg SINE Alu 1 297 -13 436 305 162 5 chr18 12586646 12586843 -73402091 - MIR SINE MIR -17 245 18 2288 123 12 0 chr18 12587859 12588192 -73400742 - MER1B DNA MER1_type 0 337 1 2115 130 0 0 chr18 12588275 12588575 -73400359 + AluSx SINE Alu 1 300 -12 1020 111 111 5 chr18 12591697 12591895 -73397039 - Tigger1 DNA MER2_type 0 2418 2200 816 144 7 7 chr18 12591891 12592030 -73396904 - Tigger1 DNA MER2_type -2279 139 1 * 23 0 0 0 chr18 12592290 12592313 -73396621 + AT_rich Low_complexity Low_complexity 1 23 0 2552 51 0 10 chr18 12592693 12593006 -73395928 + AluY SINE Alu 1 310 -1 1539 109 24 0 chr18 12593008 12593219 -73395715 + AluSq SINE Alu 92 307 -6 2950 207 81 13 chr18 12593321 12593860 -73395074 - L1ME2 LINE L1 -16 6148 5528 2250 109 13 16 chr18 12593860 12594173 -73394761 + AluSx SINE Alu 1 312 0 2950 207 81 13 chr18 12594173 12594539 -73394395 - L1ME2 LINE L1 -636 5528 5188 3096 167 80 116 chr18 12595070 12595320 -73393614 - Charlie1a DNA MER1_type -1309 1452 1195 2462 49 0 16 chr18 12595320 12595624 -73393310 - AluY SINE Alu -12 299 1 3096 167 80 116 chr18 12595624 12596342 -73392592 - Charlie1a DNA MER1_type -1566 1195 535 2023 86 0 86 chr18 12596342 12596666 -73392268 - AluSg SINE Alu -14 296 1 3096 167 80 116 chr18 12596666 12596919 -73392015 - Charlie1a DNA MER1_type -2226 535 274 2250 107 7 0 chr18 12596936 12597236 -73391698 + AluSp SINE Alu 1 302 -11 772 189 78 0 chr18 12597253 12597406 -73391528 - FRAM SINE Alu -17 159 1 264 30 0 0 chr18 12597411 12597444 -73391490 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 536 230 72 13 chr18 12597454 12597606 -73391328 - Charlie1a DNA MER1_type -1194 261 101 867 173 0 42 chr18 12597939 12598107 -73390827 - FRAM SINE Alu 0 40 1 202 289 164 19 chr18 12598108 12598212 -73390722 - L3 LINE CR1 -159 1418 1300 4638 135 65 24 chr18 12598515 12598971 -73389963 + MER4D LTR ERV1 1 437 -466 2226 94 3 17 chr18 12598971 12599268 -73389666 + AluSq SINE Alu 1 293 -20 2308 110 3 0 chr18 12599268 12599576 -73389358 + AluSc SINE Alu 1 309 0 4638 135 65 24 chr18 12599576 12599986 -73388948 + MER4D LTR ERV1 436 903 0 307 258 214 0 chr18 12600007 12600096 -73388838 - L2 LINE L2 -5 3308 3201 486 234 8 16 chr18 12600112 12600240 -73388694 + MER94 DNA DNA 3 129 -5 687 299 150 30 chr18 12600246 12600580 -73388354 + MER115 DNA AcHobo 10 383 -310 3737 131 37 58 chr18 12600961 12601349 -73387585 + LTR8A LTR ERV1 1 367 -360 2078 120 0 20 chr18 12601349 12601648 -73387286 - AluSx SINE Alu -19 293 1 3737 131 37 58 chr18 12601648 12601997 -73386937 + LTR8A LTR ERV1 367 722 -5 28 71 0 0 chr18 12602264 12602320 -73386614 + AT_rich Low_complexity Low_complexity 1 56 0 2437 95 3 0 chr18 12602537 12602842 -73386092 + AluSp SINE Alu 1 306 -7 1843 171 0 7 chr18 12602944 12603227 -73385707 + AluJb SINE Alu 1 283 -29 468 0 0 0 chr18 12603227 12603279 -73385655 + (CA)n Simple_repeat Simple_repeat 1 52 0 1843 171 0 7 chr18 12603279 12603294 -73385640 + AluJb SINE Alu 283 297 -15 302 289 83 23 chr18 12603310 12603528 -73385406 + HAL1 LINE L1 1316 1546 -961 2367 99 3 3 chr18 12603539 12603851 -73385083 + AluSx SINE Alu 1 312 0 1058 147 27 58 chr18 12603901 12604126 -73384808 - MIR SINE MIR -40 222 5 618 229 51 0 chr18 12604230 12604348 -73384586 + FLAM_A SINE Alu 2 125 -8 236 125 0 0 chr18 12604369 12604409 -73384525 - MLT1E3 LTR MaLR -23 631 592 832 220 43 43 chr18 12604445 12604700 -73384234 + pTR5 LTR ERV1 743 997 -1441 1070 213 25 14 chr18 12604774 12605131 -73383803 + pTR5 LTR ERV1 984 1344 -1094 4729 102 18 138 chr18 12605151 12606085 -73382849 + LTR12 LTR ERV1 5 826 0 1771 136 4 39 chr18 12606085 12606365 -73382569 + AluJb SINE Alu 31 300 -12 936 208 185 57 chr18 12606368 12606866 -73382068 - MLT1E3 LTR MaLR -80 544 1 1250 126 177 28 chr18 12607393 12607647 -73381287 + AluY SINE Alu 1 292 -9 1717 185 20 0 chr18 12607757 12608055 -73380879 - AluSq SINE Alu -9 304 1 409 268 49 58 chr18 12608192 12608397 -73380537 + HAL1b LINE L1 908 1110 -238 1934 156 30 0 chr18 12608412 12608707 -73380227 + AluJb SINE Alu 1 304 -8 228 336 39 0 chr18 12608942 12609046 -73379888 - MLT1J LTR MaLR -294 217 110 360 59 0 0 chr18 12609145 12609196 -73379738 + (CA)n Simple_repeat Simple_repeat 2 52 0 239 211 53 0 chr18 12609290 12609347 -73379587 - L1ME LINE L1 -323 5798 5739 1757 184 0 17 chr18 12609364 12609657 -73379277 - AluJo SINE Alu -24 288 1 876 170 27 0 chr18 12609684 12609831 -73379103 + AluJb SINE Alu 1 151 -161 739 210 51 44 chr18 12609862 12610157 -73378777 + L1MEc LINE L1 1018 1314 -5082 245 200 31 0 chr18 12610154 12610219 -73378715 + L1MEc LINE L1 1579 1645 -4751 * 609 222 11 22 chr18 12610300 12610485 -73378449 + L1MEc LINE L1 1894 2076 -4320 655 244 6 0 chr18 12610725 12610901 -73378033 + L1PBa LINE L1 21 197 -6666 466 259 131 37 chr18 12610919 12611138 -73377796 - L1MEc LINE L1 -3917 2300 2086 1194 125 10 14 chr18 12611139 12611347 -73377587 - L1PB1 LINE L1 -1 6150 5944 5180 136 26 4 chr18 12611353 12612292 -73376642 + L1PBa LINE L1 1428 2386 -4477 2635 125 87 57 chr18 12612314 12612843 -73376091 - LTR10A LTR ERV1 -64 545 1 10246 207 8 8 chr18 12612843 12613036 -73375898 + L1PBa LINE L1 2381 2572 -4290 2267 85 0 7 chr18 12613036 12613319 -73375615 + AluSg SINE Alu 1 317 0 325 0 0 0 chr18 12613319 12613355 -73375579 + (CAAAA)n Simple_repeat Simple_repeat 2 85 0 10246 207 8 8 chr18 12613355 12615642 -73373292 + L1PBa LINE L1 2572 4900 -1962 1882 122 4 0 chr18 12615646 12615901 -73373033 - AluSx SINE Alu -56 256 1 1872 112 3 33 chr18 12615903 12616207 -73372727 + L1PB1 LINE L1 5856 6150 -1 1728 223 341 48 chr18 12616208 12616453 -73372481 + L1MEc LINE L1 2086 2258 -3957 4837 157 20 45 chr18 12616453 12616876 -73372058 + L1MC1 LINE L1 5415 5847 -486 2248 106 0 7 chr18 12616876 12617169 -73371765 + AluSg SINE Alu 1 291 -19 4837 157 20 45 chr18 12617169 12617665 -73371269 + L1MC1 LINE L1 5847 6313 -20 2251 95 3 0 chr18 12617665 12617961 -73370973 - AluY SINE Alu -10 301 5 4837 157 20 45 chr18 12617961 12617982 -73370952 + L1MC1 LINE L1 6313 6333 0 1728 223 341 48 chr18 12617982 12618269 -73370665 + L1MEc LINE L1 2258 2460 -3755 2198 129 10 0 chr18 12618269 12618571 -73370363 - AluSx SINE Alu -7 305 1 1728 223 341 48 chr18 12618571 12618747 -73370187 + L1MEc LINE L1 2460 2809 -3406 2538 64 0 0 chr18 12618754 12619051 -73369883 - AluY SINE Alu -14 297 1 1341 103 0 22 chr18 12619308 12619492 -73369442 - AluSg/x SINE Alu -7 305 126 22 0 0 0 chr18 12619496 12619518 -73369416 + AT_rich Low_complexity Low_complexity 1 22 0 588 129 21 0 chr18 12619519 12619612 -73369322 + AluJ/FLAM SINE Alu 2 96 -216 1175 160 0 16 chr18 12619612 12619800 -73369134 + AluJb SINE Alu 59 243 -69 2014 139 0 23 chr18 12619919 12620222 -73368712 - AluJo SINE Alu -16 296 1 510 231 105 28 chr18 12620512 12620759 -73368175 + L1MC5 LINE L1 7642 7907 -54 982 194 0 11 chr18 12621231 12621406 -73367528 + MLT1F1 LTR MaLR 395 567 0 938 173 32 0 chr18 12622053 12622209 -73366725 - FRAM SINE Alu -15 161 1 30 59 0 0 chr18 12622493 12622544 -73366390 + AT_rich Low_complexity Low_complexity 1 51 0 2301 76 7 3 chr18 12622725 12623027 -73365907 - AluSx SINE Alu -9 303 1 2039 104 58 12 chr18 12624238 12624565 -73364369 - Tigger1 DNA MER2_type -1580 838 497 1622 166 38 153 chr18 12624883 12625246 -73363688 - L1ME2 LINE L1 -13 6151 5748 1808 176 0 23 chr18 12625246 12625552 -73363382 - AluJo SINE Alu -13 299 1 1471 130 5 5 chr18 12625562 12625777 -73363157 - AluJb SINE Alu -17 295 81 1622 166 38 153 chr18 12625777 12625888 -73363046 - L1ME2 LINE L1 -426 5738 5616 1299 191 220 19 chr18 12625888 12626301 -73362633 - LTR54B LTR ERV1 -2 496 1 1622 166 38 153 chr18 12626301 12626331 -73362603 - L1ME2 LINE L1 -548 5616 5706 1590 216 108 24 chr18 12626331 12626757 -73362177 - LTR40b LTR ERVL 0 462 1 1622 166 38 153 chr18 12626757 12626822 -73362112 - L1ME2 LINE L1 -457 5707 5636 657 156 23 55 chr18 12626822 12626950 -73361984 + FRAM SINE Alu 24 147 -29 762 209 0 34 chr18 12627059 12627207 -73361727 + FRAM SINE Alu 8 150 -26 53 17 0 0 chr18 12627207 12627267 -73361667 + AT_rich Low_complexity Low_complexity 1 60 0 319 93 37 0 chr18 12627290 12627344 -73361590 - LTR54 LTR ERV1 -2 508 453 504 156 40 6 chr18 12627346 12627519 -73361415 + (TA)n Simple_repeat Simple_repeat 2 180 0 986 146 79 6 chr18 12627531 12627709 -73361225 + LTR47A LTR ERVL 262 452 0 1001 146 6 6 chr18 12628041 12628199 -73360735 + FRAM SINE Alu 1 158 -18 1608 188 75 86 chr18 12628216 12628297 -73360637 + LTR49-int LTR ERV1 1604 1684 -4647 1658 184 3 16 chr18 12628297 12628601 -73360333 - AluJo SINE Alu -7 305 6 1608 188 75 86 chr18 12628601 12628998 -73359936 + LTR49-int LTR ERV1 1684 2077 -4254 1381 198 146 44 chr18 12629020 12629501 -73359433 - LTR10B LTR ERV1 -5 542 13 1662 193 37 74 chr18 12629502 12629734 -73359200 + LTR49-int LTR ERV1 2054 2266 -4065 2097 168 91 5 chr18 12629734 12630132 -73358802 - MSTB1 LTR MaLR 0 432 1 1662 193 37 74 chr18 12630132 12630303 -73358631 + LTR49-int LTR ERV1 2266 2442 -3889 784 126 8 16 chr18 12630303 12630430 -73358504 - Tigger1 DNA MER2_type -2263 155 30 249 160 40 0 chr18 12630523 12630573 -73358361 - MLT1G1 LTR MaLR 0 595 544 219 195 117 26 chr18 12630678 12630755 -73358179 + L2 LINE L2 1751 1834 -1480 262 186 100 0 chr18 12630775 12630845 -73358089 - L1MC4 LINE L1 -2 8040 7964 4844 111 15 19 chr18 12630881 12631278 -73357656 + L1MA5A LINE L1 5553 5947 -350 807 163 0 8 chr18 12631278 12631407 -73357527 + FLAM_C SINE Alu 1 128 -5 4844 111 15 19 chr18 12631407 12631754 -73357180 + L1MA5A LINE L1 5947 6294 -3 659 95 76 0 chr18 12631778 12631883 -73357051 - Tigger1 DNA MER2_type -104 2314 2202 * 997 143 57 11 chr18 12631853 12632028 -73356906 - Tigger1 DNA MER2_type -2235 183 1 206 83 56 0 chr18 12632426 12632462 -73356472 + CT-rich Low_complexity Low_complexity 3 40 0 956 159 5 69 chr18 12632466 12632655 -73356279 - AluJb SINE Alu 0 312 136 21 36 0 0 chr18 12633055 12633083 -73355851 + AT_rich Low_complexity Low_complexity 1 28 0 2195 85 46 0 chr18 12633084 12633365 -73355569 - AluSq SINE Alu -19 294 1 497 320 15 15 chr18 12633812 12634009 -73354925 + HAL1 LINE L1 1567 1763 -744 1857 138 3 53 chr18 12634086 12634406 -73354528 + AluSx SINE Alu 1 304 -8 227 335 150 15 chr18 12634940 12635140 -73353794 + HAL1 LINE L1 2245 2471 -36 4835 140 33 39 chr18 12635704 12636263 -73352671 - L1MB3 LINE L1 -2 6181 5620 2052 122 7 0 chr18 12636263 12636549 -73352385 - AluSq SINE Alu -20 293 6 4835 140 33 39 chr18 12636549 12636781 -73352153 - L1MB3 LINE L1 -563 5620 5388 243 0 0 0 chr18 12636781 12636808 -73352126 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1855 126 54 0 chr18 12636811 12637072 -73351862 - AluSx SINE Alu -36 276 2 4835 140 33 39 chr18 12637072 12637269 -73351665 - L1MB3 LINE L1 -797 5386 5191 1470 132 5 5 chr18 12637303 12637516 -73351418 - AluJb SINE Alu -15 297 85 1787 112 0 53 chr18 12637699 12637984 -73350950 - AluSg SINE Alu -12 298 29 1511 192 20 31 chr18 12638025 12638317 -73350617 + AluJo SINE Alu 1 289 -23 2858 133 26 28 chr18 12638588 12638721 -73350213 - LTR24 LTR ERV1 -1 466 334 1826 169 0 13 chr18 12638721 12639028 -73349906 + AluJo SINE Alu 1 303 -9 2858 133 26 28 chr18 12639028 12639361 -73349573 - LTR24 LTR ERV1 -133 334 1 2068 119 33 3 chr18 12640356 12640659 -73348275 - AluSx SINE Alu 0 312 1 2279 102 3 0 chr18 12640670 12640965 -73347969 - AluSx SINE Alu -16 296 1 383 214 29 58 chr18 12641499 12641602 -73347332 - MER65B LTR ERV1 -431 100 1 2127 104 7 3 chr18 12641638 12641945 -73346989 - AluSx SINE Alu -4 308 1 1582 158 209 6 chr18 12643012 12643328 -73345606 - MSTB LTR MaLR 0 426 47 1996 152 0 0 chr18 12643338 12643641 -73345293 + AluJo SINE Alu 9 311 -1 2194 120 10 7 chr18 12643641 12643949 -73344985 + AluSx SINE Alu 1 310 -2 821 156 95 1 chr18 12644018 12644317 -73344617 + MER93b LTR ERV1 6 373 0 1242 168 18 5 chr18 12644472 12644692 -73344242 - Tigger4(Zombi) DNA MER2_type 0 2731 2509 * 1698 159 7 0 chr18 12644688 12644958 -73343976 - Tigger4(Zombi) DNA MER2_type -2459 272 1 1888 106 75 52 chr18 12645120 12645468 -73343466 + SVA Other Other 689 1044 -342 216 0 0 0 chr18 12645471 12645495 -73343439 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 22 0 0 0 chr18 12647637 12647659 -73341275 + AT_rich Low_complexity Low_complexity 1 22 0 951 196 0 18 chr18 12647664 12647832 -73341102 + FRAM SINE Alu 1 165 -1 2138 207 65 10 chr18 12648005 12648484 -73340450 + MLT1D LTR MaLR 1 505 0 363 136 0 0 chr18 12649015 12649074 -73339860 + (TTCC)n Simple_repeat Simple_repeat 2 60 0 2223 123 3 0 chr18 12649075 12649385 -73339549 - AluY SINE Alu 0 311 1 22 56 0 0 chr18 12649462 12649498 -73339436 + AT_rich Low_complexity Low_complexity 1 36 0 10480 122 3 18 chr18 12649526 12651154 -73337780 + HERVH LTR ERV1 2390 3993 -3720 3405 164 11 9 chr18 12651137 12651753 -73337181 + HERVH LTR ERV1 3995 5225 -1866 * 2653 145 8 40 chr18 12651753 12652228 -73336706 + HERVH LTR ERV1 6489 6948 -765 268 102 0 136 chr18 12652222 12652281 -73336653 + HERVH LTR ERV1 7663 7713 0 * 1644 95 26 0 chr18 12652282 12652513 -73336421 + HERVH LTR ERV1 7173 7409 -304 1874 183 147 30 chr18 12652513 12653004 -73335930 + LTR10A LTR ERV1 1 548 -61 2026 100 10 16 chr18 12653017 12653327 -73335607 + HERVH LTR ERV1 7406 7713 0 1552 182 106 45 chr18 12653327 12653751 -73335183 + LTR7 LTR ERV1 1 450 0 276 354 56 7 chr18 12653864 12654008 -73334926 - MIR SINE MIR -92 170 20 207 339 157 19 chr18 12654146 12654459 -73334475 - L2 LINE L2 -339 2975 2620 444 199 30 17 chr18 12654636 12654744 -73334190 - L1ME2 LINE L1 -1 6165 6064 2200 119 0 0 chr18 12655743 12656037 -73332897 + AluSg SINE Alu 1 294 -16 1616 173 77 0 chr18 12656510 12656782 -73332152 + AluJb SINE Alu 1 293 -19 1794 158 6 25 chr18 12657728 12658045 -73330889 + AluSx SINE Alu 1 311 -1 2156 118 6 10 chr18 12659221 12659534 -73329400 - AluSx SINE Alu 0 312 1 809 226 168 104 chr18 12659717 12659771 -73329163 - L1MC4a LINE L1 -1637 6171 6122 2225 115 0 0 chr18 12659771 12660066 -73328868 + AluSx SINE Alu 1 295 -17 809 226 168 104 chr18 12660066 12660406 -73328528 - L1MC4a LINE L1 -1686 6122 5805 2160 139 0 13 chr18 12660406 12660723 -73328211 + AluSq SINE Alu 1 313 0 809 226 168 104 chr18 12660723 12661155 -73327779 - L1MC4a LINE L1 -2003 5805 5291 283 269 30 19 chr18 12661344 12661496 -73327438 - L1 LINE L1 -1095 5051 4902 1664 181 10 20 chr18 12662205 12662497 -73326437 - AluJo SINE Alu -23 289 1 772 295 81 60 chr18 12662616 12663063 -73325871 + L1MEd LINE L1 532 987 -5385 2190 93 4 0 chr18 12663775 12664055 -73324879 + AluSp SINE Alu 1 281 -32 189 0 0 0 chr18 12664055 12664076 -73324858 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1923 176 3 0 chr18 12664301 12664608 -73324326 - AluJb SINE Alu -4 308 1 402 243 240 68 chr18 12664922 12665218 -73323716 + MLT1K LTR MaLR 224 570 -18 2088 220 92 18 chr18 12665218 12666246 -73322688 + L1MEd LINE L1 1709 2833 -3549 1389 147 85 6 chr18 12666304 12666583 -73322351 + MER33 DNA MER1_type 1 301 -23 600 243 96 23 chr18 12667408 12667626 -73321308 + MLT1J LTR MaLR 241 474 -37 2309 80 7 0 chr18 12667989 12668278 -73320656 - AluSx SINE Alu -21 291 1 321 233 121 73 chr18 12669762 12669985 -73318949 - L2 LINE L2 -28 3285 3049 1948 143 3 10 chr18 12669985 12670293 -73318641 + AluSx SINE Alu 1 306 -6 2374 72 0 10 chr18 12671372 12671677 -73317257 - AluSq SINE Alu -11 302 1 972 144 0 7 chr18 12672408 12672561 -73316373 - AluJb SINE Alu -7 305 154 696 129 0 0 chr18 12672569 12672670 -73316264 - LTR12 LTR ERV1 -133 581 481 367 182 30 20 chr18 12672671 12672770 -73316164 - LTR30 LTR ERV1 -79 643 544 1053 136 110 83 chr18 12672880 12673108 -73315826 - LTR12 LTR ERV1 -480 234 1 665 159 168 0 chr18 12673125 12673238 -73315696 - FLAM_C SINE Alu -1 132 1 1404 114 0 0 chr18 12676717 12676901 -73312033 - AluSg/x SINE Alu -14 295 112 2215 104 0 3 chr18 12676982 12677296 -73311638 + AluSq SINE Alu 1 313 0 222 105 0 0 chr18 12677697 12677735 -73311199 + (T)n Simple_repeat Simple_repeat 1 38 0 2215 89 7 0 chr18 12677879 12678161 -73310773 - AluSp SINE Alu -29 284 1 2278 97 3 0 chr18 12678806 12679106 -73309828 - AluSg SINE Alu -9 301 1 198 0 0 0 chr18 12679715 12679737 -73309197 + (T)n Simple_repeat Simple_repeat 1 22 0 3228 214 131 66 chr18 12679768 12680018 -73308916 + L1MC4 LINE L1 6744 6976 -1019 1719 155 4 4 chr18 12680018 12680282 -73308652 + AluJo SINE Alu 1 264 -48 189 0 0 0 chr18 12680288 12680309 -73308625 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 3228 214 131 66 chr18 12680309 12681183 -73307751 + L1MC4 LINE L1 6980 7907 -88 4770 108 31 23 chr18 12681183 12681920 -73307014 - L1MA5A LINE L1 -2 6295 5553 3228 214 131 66 chr18 12681920 12682016 -73306918 + L1MC4 LINE L1 7907 7995 0 1738 175 0 11 chr18 12682036 12682322 -73306612 + AluJo SINE Alu 13 295 -17 328 152 38 51 chr18 12682342 12682421 -73306513 - L2 LINE L2 -1477 1837 1760 777 241 6 0 chr18 12682436 12682610 -73306324 + MLT1G1 LTR MaLR 421 595 0 8900 129 24 41 chr18 12682644 12684145 -73304789 + Tigger1 DNA MER2_type 2 1477 -941 1355 128 32 9 chr18 12684142 12684360 -73304574 + Tigger1 DNA MER2_type 99 321 -2097 * 4278 108 11 9 chr18 12684360 12684852 -73304082 + Tigger1 DNA MER2_type 1465 1960 -458 1708 195 0 7 chr18 12684852 12685155 -73303779 - AluJo SINE Alu -11 301 1 4278 108 11 9 chr18 12685155 12685292 -73303642 + Tigger1 DNA MER2_type 1960 2095 -323 808 182 0 23 chr18 12685292 12685424 -73303510 + FLAM_C SINE Alu 7 135 -8 2467 75 0 3 chr18 12685424 12685732 -73303202 + AluY SINE Alu 1 307 -4 2043 146 15 6 chr18 12685733 12686063 -73302871 + Tigger1 DNA MER2_type 2085 2417 -1 298 328 61 41 chr18 12686347 12686506 -73302428 - MIR3 SINE MIR -43 165 4 2333 81 3 0 chr18 12686609 12686943 -73301991 + AluSp SINE Alu 1 335 0 722 217 8 0 chr18 12687031 12687160 -73301774 + FLAM_A SINE Alu 1 130 -3 910 250 103 60 chr18 12687628 12688097 -73300837 + L1MC5 LINE L1 7272 7778 -183 2199 116 7 16 chr18 12688097 12688400 -73300534 - AluSq SINE Alu -13 300 1 910 250 103 60 chr18 12688400 12688569 -73300365 + L1MC5 LINE L1 7778 7938 -23 509 324 29 0 chr18 12688782 12688992 -73299942 - HAL1 LINE L1 -697 1810 1595 688 276 34 47 chr18 12689030 12689327 -73299607 - HAL1 LINE L1 -984 1523 1231 1828 137 27 7 chr18 12689416 12689708 -73299226 - AluSq SINE Alu -15 298 1 2196 99 17 0 chr18 12689708 12689999 -73298935 - AluSx SINE Alu -15 297 1 2924 9 0 3 chr18 12690160 12690479 -73298455 - AluYb8 SINE Alu 0 318 1 2293 104 0 3 chr18 12690939 12691238 -73297696 + AluSx SINE Alu 1 298 -14 608 344 62 3 chr18 12691505 12691828 -73297106 + L2 LINE L2 2272 2613 -701 328 316 61 50 chr18 12691862 12692140 -73296794 + L2 LINE L2 504 784 -2530 932 288 81 32 chr18 12692147 12692394 -73296540 + L2 LINE L2 2457 2735 -579 2321 117 3 0 chr18 12692394 12692702 -73296232 + AluSg SINE Alu 1 309 -1 932 288 81 32 chr18 12692702 12692885 -73296049 + L2 LINE L2 2735 2908 -406 2054 125 23 7 chr18 12693051 12693356 -73295578 - AluSx SINE Alu -2 310 1 2210 114 3 0 chr18 12693356 12693646 -73295288 - AluSx SINE Alu -21 291 1 408 287 60 0 chr18 12693958 12694108 -73294826 + L1ME3A LINE L1 6012 6170 0 592 165 43 9 chr18 12694437 12694552 -73294382 + Charlie1 DNA MER1_type 2310 2428 -333 282 105 0 88 chr18 12694549 12694606 -73294328 + Charlie1 DNA MER1_type 2710 2761 0 * 674 237 80 44 chr18 12695481 12695730 -73293204 + MIR SINE MIR 5 262 0 451 224 30 1 chr18 12695983 12696105 -73292829 + L1 LINE L1 4500 4625 -1521 5152 102 26 14 chr18 12696213 12696977 -73291957 - L1PA13 LINE L1 -8 6155 5383 1237 159 5 45 chr18 12696978 12697198 -73291736 - AluJb SINE Alu -101 211 1 2648 187 0 4 chr18 12697198 12697685 -73291249 - L1PA13 LINE L1 -1584 4562 4078 1670 176 19 94 chr18 12697684 12697882 -73291052 - L1MCa LINE L1 -870 5556 5345 * 2077 105 4 4 chr18 12697882 12698159 -73290775 + AluJb SINE Alu 14 290 -22 1670 176 19 94 chr18 12698159 12698369 -73290565 - L1MCa LINE L1 -1081 5345 5185 2487 73 0 10 chr18 12698369 12698683 -73290251 + AluSx SINE Alu 1 311 -1 1670 176 19 94 chr18 12698683 12698740 -73290194 - L1MCa LINE L1 -1241 5185 5125 1762 159 3 69 chr18 12698740 12699037 -73289897 + MER2 DNA MER2_type 1 271 -74 1825 158 34 3 chr18 12699037 12699329 -73289605 - AluJb SINE Alu -11 301 1 1762 159 3 69 chr18 12699329 12699395 -73289539 + MER2 DNA MER2_type 271 340 -5 10191 199 44 42 chr18 12699401 12699672 -73289262 - L1MCa LINE L1 -1301 5125 4856 2054 125 3 7 chr18 12699672 12699968 -73288966 + AluSx SINE Alu 1 295 -17 10191 199 44 42 chr18 12699968 12700701 -73288233 - L1MCa LINE L1 -1570 4856 4126 2476 74 0 0 chr18 12700701 12700998 -73287936 - AluY SINE Alu -9 302 6 10191 199 44 42 chr18 12700998 12702328 -73286606 - L1MCa LINE L1 -2300 4126 2800 1801 156 40 23 chr18 12702328 12702630 -73286304 - AluSx SINE Alu -5 307 1 10191 199 44 42 chr18 12702630 12703371 -73285563 - L1MCa LINE L1 -3626 2800 2043 1670 170 88 19 chr18 12703371 12703501 -73285433 + MER44D DNA MER2_type 1 121 -2370 185 0 0 39 chr18 12703501 12703527 -73285407 + (TTTTA)n Simple_repeat Simple_repeat 4 28 0 1670 170 88 19 chr18 12703527 12703713 -73285221 + MER44D DNA MER2_type 121 609 0 10191 199 44 42 chr18 12703713 12703820 -73285114 - L1MCa LINE L1 -4383 2043 1938 2233 90 20 3 chr18 12703824 12704125 -73284809 + AluSg SINE Alu 1 306 -4 2376 91 0 3 chr18 12704294 12704592 -73284342 + AluSg SINE Alu 1 297 -13 1228 150 15 46 chr18 12705503 12705558 -73283376 + L1 LINE L1 5030 5085 -1061 2348 99 0 0 chr18 12705558 12705851 -73283083 - AluSc SINE Alu -16 293 1 1228 150 15 46 chr18 12705851 12706055 -73282879 + L1 LINE L1 5085 5281 -865 261 202 5 4 chr18 12706058 12706266 -73282668 + AluJo SINE Alu 1 299 -3 2383 100 81 158 chr18 12706266 12706325 -73282609 + L1MA8 LINE L1 5278 5340 -951 2161 112 3 0 chr18 12706325 12706610 -73282324 + AluSg SINE Alu 3 288 -22 2383 100 81 158 chr18 12706610 12706725 -73282209 + L1MA8 LINE L1 5340 5462 -829 1980 154 3 10 chr18 12706725 12706929 -73282005 - AluSx SINE Alu 0 312 135 2369 92 0 0 chr18 12706929 12707223 -73281711 - AluSx SINE Alu -18 294 1 1980 154 3 10 chr18 12707223 12707358 -73281576 - AluSx SINE Alu -177 135 1 2383 100 81 158 chr18 12707358 12707388 -73281546 + L1MA8 LINE L1 5462 5493 -798 2052 130 0 7 chr18 12707388 12707697 -73281237 + AluSg1 SINE Alu 1 307 0 2383 100 81 158 chr18 12707697 12708091 -73280843 + L1MA8 LINE L1 5493 5833 -458 1726 152 10 1 chr18 12708091 12708372 -73280562 - MER1B DNA MER1_type 0 339 12 2726 111 63 14 chr18 12708372 12708657 -73280277 + L1MA8 LINE L1 5823 6139 -152 1702 159 71 0 chr18 12708657 12708940 -73279994 + AluJb SINE Alu 1 303 -9 2726 111 63 14 chr18 12708940 12709095 -73279839 + L1MA8 LINE L1 6139 6285 -6 1903 157 0 16 chr18 12709864 12710170 -73278764 - AluJo SINE Alu -11 301 1 1711 167 26 32 chr18 12710182 12710494 -73278440 - AluJb SINE Alu 0 312 3 23 0 0 0 chr18 12710536 12710559 -73278375 + AT_rich Low_complexity Low_complexity 1 23 0 1738 175 3 7 chr18 12710559 12710844 -73278090 - AluJo SINE Alu -22 290 7 320 221 2 104 chr18 12711002 12711068 -73277866 + L1MC5 LINE L1 7114 7129 -832 2070 139 0 3 chr18 12711068 12711378 -73277556 - AluSx SINE Alu -3 309 1 320 221 2 104 chr18 12711378 12711460 -73277474 + L1MC5 LINE L1 7129 7218 -743 674 248 30 67 chr18 12711587 12711958 -73276976 + L1MC5 LINE L1 7303 7659 -302 2036 139 0 7 chr18 12711961 12712271 -73276663 + AluSx SINE Alu 1 308 -4 239 203 14 0 chr18 12713229 12713303 -73275631 + (CA)n Simple_repeat Simple_repeat 2 76 0 2082 127 0 0 chr18 12713381 12713672 -73275262 + AluJb SINE Alu 1 291 -21 988 281 111 59 chr18 12714040 12714773 -73274161 + HAL1 LINE L1 408 1178 -1329 493 229 134 22 chr18 12714914 12715145 -73273789 + HAL1 LINE L1 2244 2500 -7 1592 252 138 4 chr18 12716370 12716847 -73272087 + MLT1H LTR MaLR 1 541 -8 387 310 183 18 chr18 12717075 12717349 -73271585 - L3 LINE CR1 -15 1562 1244 180 0 0 0 chr18 12718897 12718917 -73270017 + (T)n Simple_repeat Simple_repeat 1 20 0 22 35 0 0 chr18 12718957 12718986 -73269948 + AT_rich Low_complexity Low_complexity 1 29 0 1224 156 53 4 chr18 12719022 12719247 -73269687 - MER46A DNA MER2_type 0 236 1 2382 74 0 3 chr18 12720633 12720931 -73268003 + AluY SINE Alu 1 297 -14 201 274 167 0 chr18 12721595 12721679 -73267255 - MIR SINE MIR -38 224 127 23 68 0 0 chr18 12721770 12721814 -73267120 + AT_rich Low_complexity Low_complexity 1 44 0 2088 158 6 11 chr18 12722621 12722970 -73265964 - MER7A DNA MER2_type 0 346 2 2428 176 15 21 chr18 12723423 12723941 -73264993 + L1ME1 LINE L1 5616 6130 -36 2096 147 0 3 chr18 12723943 12724256 -73264678 + AluSx SINE Alu 1 312 0 290 259 17 52 chr18 12724525 12724641 -73264293 + L1ME4a LINE L1 5960 6071 -50 21 71 0 0 chr18 12724649 12724691 -73264243 + AT_rich Low_complexity Low_complexity 1 42 0 207 0 0 0 chr18 12724941 12724964 -73263970 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 356 245 49 21 chr18 12725339 12725482 -73263452 + L1MC5 LINE L1 7761 7907 -54 2475 72 0 0 chr18 12725736 12726029 -73262905 - AluSg SINE Alu -17 293 1 332 272 49 82 chr18 12727800 12728227 -73260707 + HAL1 LINE L1 764 1176 -1331 1049 172 30 19 chr18 12728235 12728502 -73260432 + L1MB7 LINE L1 4333 4602 -1544 5695 142 16 58 chr18 12728514 12729119 -73259815 + L1MC2 LINE L1 5101 5621 -723 1199 234 55 4 chr18 12729119 12729393 -73259541 - AluJo SINE Alu -13 289 2 5695 142 16 58 chr18 12729393 12730084 -73258850 + L1MC2 LINE L1 5621 6339 -5 1882 172 112 111 chr18 12730083 12730427 -73258507 + L1MB7 LINE L1 4598 4940 -1229 * 513 217 0 0 chr18 12730427 12730519 -73258415 - FRAM SINE Alu -84 92 1 1882 172 112 111 chr18 12730519 12730830 -73258104 + L1MB7 LINE L1 4940 5343 -826 1775 156 0 40 chr18 12730830 12731131 -73257803 + AluJo SINE Alu 1 289 -23 1882 172 112 111 chr18 12731131 12731150 -73257784 + L1MB7 LINE L1 5343 5360 -809 1185 155 0 11 chr18 12731176 12731357 -73257577 + AluJb SINE Alu 119 297 -15 309 51 0 0 chr18 12731358 12731397 -73257537 + (CA)n Simple_repeat Simple_repeat 2 40 0 1356 161 93 7 chr18 12731403 12731682 -73257252 + L1MB7 LINE L1 5373 5675 -509 1335 181 13 34 chr18 12731697 12731935 -73256999 + AluJo SINE Alu 15 247 -65 2136 183 69 8 chr18 12731994 12732486 -73256448 + L1MB7 LINE L1 5663 6184 0 459 120 26 0 chr18 12732550 12732678 -73256256 + (TA)n Simple_repeat Simple_repeat 1 131 0 1367 263 74 8 chr18 12732729 12733253 -73255681 + HAL1 LINE L1 1338 1896 -611 357 197 33 41 chr18 12733319 12733441 -73255493 + HAL1 LINE L1 2030 2150 -357 1074 222 99 0 chr18 12733534 12733755 -73255179 - MIR SINE MIR -16 246 4 254 100 0 0 chr18 12733762 12733802 -73255132 + HAL1b LINE L1 762 801 -547 31 26 0 0 chr18 12734065 12734103 -73254831 + AT_rich Low_complexity Low_complexity 1 38 0 362 241 5 91 chr18 12734255 12734442 -73254492 + HAL1 LINE L1 2225 2395 -112 21 0 0 0 chr18 12734501 12734522 -73254412 + AT_rich Low_complexity Low_complexity 1 21 0 198 274 20 0 chr18 12734584 12734635 -73254299 - MIR3 SINE MIR -23 185 134 654 188 23 0 chr18 12734641 12734774 -73254160 + MLT1G1 LTR MaLR 1 136 -459 284 203 27 27 chr18 12734823 12734897 -73254037 + GA-rich Low_complexity Low_complexity 6 79 0 826 222 25 0 chr18 12734963 12735161 -73253773 - MER3 DNA MER1_type -6 203 1 657 199 62 12 chr18 12735174 12735335 -73253599 + MLT1G1 LTR MaLR 427 595 0 2603 62 0 0 chr18 12735491 12735800 -73253134 - AluY SINE Alu -2 309 1 1337 103 0 22 chr18 12736057 12736241 -73252693 - AluSg/x SINE Alu -7 303 124 22 0 0 0 chr18 12736245 12736267 -73252667 + AT_rich Low_complexity Low_complexity 1 22 0 591 128 21 0 chr18 12736267 12736361 -73252573 + AluJ/FLAM SINE Alu 1 96 -216 1175 160 0 16 chr18 12736361 12736549 -73252385 + AluJb SINE Alu 59 243 -69 2016 139 0 23 chr18 12736668 12736971 -73251963 - AluJo SINE Alu -16 296 1 415 231 105 28 chr18 12737261 12737508 -73251426 + L1MC5 LINE L1 7642 7907 -54 903 194 0 11 chr18 12737980 12738155 -73250779 + MLT1F1 LTR MaLR 395 567 0 934 173 32 0 chr18 12738802 12738958 -73249976 - FRAM SINE Alu -5 161 1 30 59 0 0 chr18 12739242 12739293 -73249641 + AT_rich Low_complexity Low_complexity 1 51 0 2382 66 3 0 chr18 12739474 12739776 -73249158 - AluSx SINE Alu -9 303 1 440 308 112 77 chr18 12740672 12741499 -73247435 + L1M2 LINE L1 248 1270 -5579 251 317 0 0 chr18 12741764 12741824 -73247110 + MER5A DNA MER1_type 63 122 -67 1803 144 17 7 chr18 12742042 12742340 -73246594 - AluJo SINE Alu -11 301 1 1606 204 128 7 chr18 12742737 12743198 -73245736 - Charlie1b DNA MER1_type 0 523 7 2090 125 0 3 chr18 12743283 12743586 -73245348 - AluSg SINE Alu -6 304 3 1691 159 69 112 chr18 12744060 12744115 -73244819 - MLT1D LTR MaLR -17 488 432 1745 173 0 11 chr18 12744115 12744432 -73244502 + AluJb SINE Alu 5 318 0 1691 159 69 112 chr18 12744432 12744883 -73244051 - MLT1D LTR MaLR -73 432 3 21 36 0 0 chr18 12745885 12745913 -73243021 + AT_rich Low_complexity Low_complexity 1 28 0 14564 121 29 22 chr18 12746165 12747385 -73241549 - Tigger1 DNA MER2_type -4 2414 1167 1737 196 0 13 chr18 12747385 12747697 -73241237 - AluJo SINE Alu -4 308 1 14564 121 29 22 chr18 12747697 12748873 -73240061 - Tigger1 DNA MER2_type -1251 1167 1 317 217 14 0 chr18 12749095 12749164 -73239770 + L2 LINE L2 3203 3272 0 2632 147 4 52 chr18 12749776 12750300 -73238634 - L1MB5 LINE L1 -13 6161 5663 2127 160 66 18 chr18 12750305 12750601 -73238333 - L1MA8 LINE L1 0 6291 5960 2232 111 0 7 chr18 12750601 12750907 -73238027 - AluSx SINE Alu -4 308 5 2127 160 66 18 chr18 12750907 12751109 -73237825 - L1MA8 LINE L1 -331 5960 5769 1900 163 3 13 chr18 12751115 12751422 -73237512 - AluJo SINE Alu 0 312 9 529 175 78 0 chr18 12751433 12751536 -73237398 - FAM SINE Alu -2 183 73 318 85 0 0 chr18 12751539 12751586 -73237348 - L1MA8 LINE L1 -872 5462 5416 1148 161 18 14 chr18 12751586 12751809 -73237125 - L1MB5 LINE L1 -498 5676 5453 776 202 96 6 chr18 12752199 12752377 -73236557 + MIR SINE MIR 63 256 -6 1360 290 143 37 chr18 12752434 12753381 -73235553 - L2 LINE L2 -106 3207 2101 183 309 41 0 chr18 12754141 12754238 -73234696 - MIR3 SINE MIR -18 190 90 3061 124 17 4 chr18 12754356 12754817 -73234117 - LTR24 LTR ERV1 0 467 1 183 115 0 0 chr18 12755204 12755230 -73233704 + L2 LINE L2 3264 3289 -24 630 227 208 102 chr18 12755454 12755835 -73233099 - MLT1G LTR MaLR 0 590 139 2289 114 3 0 chr18 12755835 12756141 -73232793 - AluSx SINE Alu -5 307 1 630 227 208 102 chr18 12756141 12756297 -73232637 - MLT1G LTR MaLR -451 139 1 21 36 0 0 chr18 12756734 12756762 -73232172 + AT_rich Low_complexity Low_complexity 1 28 0 964 166 6 29 chr18 12756848 12757023 -73231911 + FRAM SINE Alu 1 167 -9 253 313 0 0 chr18 12757028 12757095 -73231839 - L2 LINE L2 -21 3292 3226 339 282 65 40 chr18 12757400 12757524 -73231410 - L2 LINE L2 0 3313 3187 3424 188 83 2 chr18 12758349 12759356 -73229578 - L1ME1 LINE L1 -50 6116 5044 2289 109 3 0 chr18 12759358 12759661 -73229273 + AluSp SINE Alu 4 307 -6 183 80 0 0 chr18 12759661 12759686 -73229248 + (TTTTC)n Simple_repeat Simple_repeat 1 25 0 * 313 74 19 19 chr18 12759684 12759738 -73229196 + (TCCC)n Simple_repeat Simple_repeat 3 56 0 1818 168 28 3 chr18 12759738 12760029 -73228905 - AluSx SINE Alu -14 298 1 1732 219 31 73 chr18 12760035 12760600 -73228334 - L1ME1 LINE L1 -1096 5050 4517 2054 123 0 4 chr18 12760600 12760877 -73228057 - AluSg SINE Alu -13 297 22 1732 219 31 73 chr18 12760877 12760996 -73227938 - L1ME1 LINE L1 -1629 4517 4395 * 5626 77 9 4 chr18 12760988 12761782 -73227152 - L1PA10 LINE L1 -2 6166 5369 3283 123 15 0 chr18 12761777 12762321 -73226613 + L1PA10 LINE L1 4798 5349 -797 * 4112 217 52 72 chr18 12762366 12762492 -73226442 - L1ME1 LINE L1 -1800 4346 4219 1735 139 64 18 chr18 12762492 12762772 -73226162 - AluSx SINE Alu -19 293 1 4112 217 52 72 chr18 12762772 12763368 -73225566 - L1ME1 LINE L1 -1927 4219 3613 2285 110 3 3 chr18 12763368 12763677 -73225257 - AluSc SINE Alu 0 309 1 4112 217 52 72 chr18 12763677 12764610 -73224324 - L1ME1 LINE L1 -2533 3613 2663 2621 47 0 0 chr18 12764610 12764907 -73224027 + AluY SINE Alu 1 297 -14 4112 217 52 72 chr18 12764907 12765090 -73223844 - L1ME1 LINE L1 -3483 2663 2478 2248 119 10 0 chr18 12765090 12765392 -73223542 + AluSx SINE Alu 1 305 -7 4112 217 52 72 chr18 12765392 12765679 -73223255 - L1ME1 LINE L1 -3668 2478 2275 426 132 11 99 chr18 12765679 12765700 -73223234 - L1MC1 LINE L1 0 6333 6312 2230 95 3 0 chr18 12765700 12765996 -73222938 + AluY SINE Alu 5 301 -10 426 132 11 99 chr18 12765996 12766065 -73222869 - L1MC1 LINE L1 -21 6312 6251 1327 190 25 22 chr18 12766170 12766444 -73222490 - AluJo SINE Alu -25 287 13 1924 114 4 4 chr18 12766486 12766757 -73222177 + AluSq SINE Alu 39 309 -4 203 175 25 0 chr18 12766760 12766800 -73222134 + (TGGA)n Simple_repeat Simple_repeat 3 43 0 273 244 76 34 chr18 12766800 12766919 -73222015 + L1MC4 LINE L1 7918 8041 -1 21 0 0 0 chr18 12767396 12767417 -73221517 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr18 12767451 12767472 -73221462 + AT_rich Low_complexity Low_complexity 1 21 0 339 323 11 0 chr18 12768029 12768122 -73220812 - L1MC/D LINE L1 -2186 5622 5529 266 233 41 27 chr18 12768894 12768967 -73219967 - MIR SINE MIR -148 114 41 2284 92 10 0 chr18 12769099 12769394 -73219540 + AluSp SINE Alu 1 298 -15 2215 128 0 0 chr18 12769401 12769699 -73219235 + AluSx SINE Alu 1 298 -14 1272 199 9 5 chr18 12769711 12769927 -73219007 + MER58A DNA MER1_type 5 221 -3 291 296 57 0 chr18 12770026 12770114 -73218820 + L3 LINE CR1 427 519 -1058 2676 106 3 5 chr18 12770453 12770821 -73218113 - THE1C LTR MaLR -8 367 1 576 248 199 25 chr18 12770821 12771103 -73217831 + HAL1 LINE L1 62 392 -2115 312 298 0 0 chr18 12771113 12771207 -73217727 - ERVL LTR ERVL -1780 3984 3891 1246 325 10 2 chr18 12771319 12771719 -73217215 - ERVL LTR ERVL -3423 1573 1171 1396 278 51 48 chr18 12771721 12772286 -73216648 - ERVL LTR ERVL -3799 1197 631 858 336 53 15 chr18 12772448 12772844 -73216090 - ERVL LTR ERVL -4569 427 17 229 302 22 45 chr18 12772864 12773043 -73215891 - LTR16B LTR ERVL -2 462 288 298 173 27 0 chr18 12773060 12773135 -73215799 + GA-rich Low_complexity Low_complexity 4 80 0 988 279 49 23 chr18 12773135 12773440 -73215494 - LTR16B LTR ERVL -151 313 1 293 185 12 62 chr18 12773503 12773584 -73215350 + HAL1 LINE L1 724 800 -1707 1437 203 4 11 chr18 12773588 12773859 -73215075 + AluJo SINE Alu 1 269 -43 2136 241 40 88 chr18 12773866 12773956 -73214978 + HAL1 LINE L1 807 900 -1607 2321 117 0 0 chr18 12773956 12774265 -73214669 + AluSc SINE Alu 1 309 0 2136 241 40 88 chr18 12774265 12774573 -73214361 + HAL1 LINE L1 900 1221 -1286 880 168 0 0 chr18 12774573 12774704 -73214230 + FLAM_C SINE Alu 1 131 -2 2136 241 40 88 chr18 12774704 12775318 -73213616 + HAL1 LINE L1 1221 1772 -735 2758 98 13 3 chr18 12775318 12775696 -73213238 + MLT1B LTR MaLR 1 382 -8 1189 244 81 24 chr18 12775697 12776078 -73212856 + HAL1 LINE L1 1760 2162 -345 743 211 42 107 chr18 12776088 12776354 -73212580 + HAL1 LINE L1 2056 2303 -204 2291 239 33 16 chr18 12776354 12776864 -73212070 - LTR40a LTR ERVL 0 519 1 743 211 42 107 chr18 12776864 12776886 -73212048 + HAL1 LINE L1 2303 2325 -182 686 157 65 0 chr18 12776891 12776999 -73211935 + Tigger5 DNA MER2_type 1 115 -2208 * 1383 137 0 5 chr18 12776996 12777207 -73211727 + Tigger5 DNA MER2_type 2114 2323 0 587 234 16 43 chr18 12777207 12777391 -73211543 + HAL1 LINE L1 2329 2507 0 1497 162 0 4 chr18 12777845 12778079 -73210855 + AluJo SINE Alu 1 233 -79 706 155 0 0 chr18 12778079 12778182 -73210752 + AluJo/FRAM SINE Alu 188 290 -22 254 283 0 0 chr18 12778558 12778611 -73210323 - MIR SINE MIR -205 57 5 26 30 0 0 chr18 12778611 12778644 -73210290 + AT_rich Low_complexity Low_complexity 1 33 0 2634 155 31 2 chr18 12778962 12779376 -73209558 + MSTB LTR MaLR 1 426 0 323 312 0 0 chr18 12779410 12779487 -73209447 - L2 LINE L2 -5 3267 3191 432 248 37 21 chr18 12779656 12779811 -73209123 + MLT1H LTR MaLR 14 188 -221 1481 237 8 17 chr18 12780309 12780740 -73208194 - L1M4b LINE L1 -3683 3165 2781 * 4994 167 26 2 chr18 12780731 12781411 -73207523 - L1MB3 LINE L1 -2 6181 5474 216 0 0 0 chr18 12781411 12781435 -73207499 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4994 167 26 2 chr18 12781435 12781630 -73207304 - L1MB3 LINE L1 -709 5474 5285 204 40 0 0 chr18 12781650 12781675 -73207259 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 629 158 0 0 chr18 12781702 12781797 -73207137 - FLAM_A SINE Alu -46 96 2 1399 211 7 11 chr18 12781868 12782138 -73206796 + AluJo SINE Alu 21 289 -23 1062 206 99 70 chr18 12782234 12782320 -73206614 + MLT1A1 LTR MaLR 1 83 -282 1923 104 25 101 chr18 12782320 12782646 -73206288 + AluSx SINE Alu 1 301 -11 1062 206 99 70 chr18 12782646 12782693 -73206241 + MLT1A1 LTR MaLR 83 127 -238 3490 157 76 48 chr18 12782693 12783400 -73205534 - LTR8A LTR ERV1 0 727 1 1062 206 99 70 chr18 12783400 12783620 -73205314 + MLT1A1 LTR MaLR 127 365 0 1769 285 44 20 chr18 12783620 12784475 -73204459 - L1M4b LINE L1 -4349 2680 1805 1988 92 6 82 chr18 12784576 12784891 -73204043 - AluSp SINE Alu -20 293 3 22 0 0 0 chr18 12785212 12785234 -73203700 + AT_rich Low_complexity Low_complexity 1 22 0 4456 80 25 18 chr18 12785463 12785828 -73203106 - L1PB2 LINE L1 -3 6148 5776 438 0 65 47 chr18 12785828 12785935 -73202999 + (TA)n Simple_repeat Simple_repeat 2 110 0 4456 80 25 18 chr18 12785935 12786171 -73202763 - L1PB2 LINE L1 -375 5776 5543 856 274 92 33 chr18 12786265 12786707 -73202227 - L1M4b LINE L1 -5063 1683 1187 207 0 0 0 chr18 12786707 12786730 -73202204 + (TTG)n Simple_repeat Simple_repeat 2 24 0 856 274 92 33 chr18 12786730 12787009 -73201925 - L1M4b LINE L1 -5559 1187 926 298 290 62 31 chr18 12787462 12787624 -73201310 - L1M4b LINE L1 -5859 979 813 251 287 103 0 chr18 12787999 12788086 -73200848 - MLT1L LTR MaLR -206 409 314 316 317 117 57 chr18 12789855 12790189 -73198745 - L1M4b LINE L1 -5933 916 563 2283 81 26 7 chr18 12791219 12791526 -73197408 - AluSp SINE Alu 0 313 1 207 267 22 0 chr18 12792374 12792419 -73196515 - L2 LINE L2 -18 3254 3209 1804 152 3 55 chr18 12793439 12793768 -73195166 - AluJb SINE Alu 0 312 1 1057 133 12 12 chr18 12793947 12794113 -73194821 + AluSg/x SINE Alu 119 284 -26 363 199 60 18 chr18 12794426 12794592 -73194342 + (CA)n Simple_repeat Simple_repeat 1 173 0 2452 44 0 13 chr18 12794790 12795088 -73193846 + AluY SINE Alu 1 294 -17 230 175 0 0 chr18 12795376 12795416 -73193518 + MER34 LTR ERV1 3 42 -500 409 250 112 58 chr18 12795617 12795841 -73193093 + LTR48B LTR ERV1 406 641 -3 2395 52 3 19 chr18 12796953 12797261 -73191673 - AluY SINE Alu -8 303 1 315 208 47 75 chr18 12797865 12797971 -73190963 - MIR SINE MIR -50 212 110 2306 98 0 3 chr18 12800012 12800318 -73188616 + AluSx SINE Alu 1 305 -7 344 306 139 53 chr18 12802538 12803127 -73185807 + L1MCc LINE L1 25 664 -5759 607 229 48 30 chr18 12803179 12803410 -73185524 + L1MCc LINE L1 1013 1247 -5176 342 239 103 60 chr18 12803419 12803536 -73185398 + L1MCc LINE L1 2208 2363 -4612 2061 197 59 74 chr18 12803540 12804437 -73184497 + L1MB7 LINE L1 5259 6105 -79 345 220 127 40 chr18 12804485 12804658 -73184276 + L1MCc LINE L1 2354 2541 -4581 229 260 110 40 chr18 12805121 12805221 -73183713 + L2 LINE L2 3161 3267 -5 1765 240 138 83 chr18 12805272 12805505 -73183429 + L1MC4 LINE L1 6207 6426 -1476 2413 66 0 7 chr18 12805505 12805806 -73183128 - AluY SINE Alu -12 299 1 1765 240 138 83 chr18 12805806 12806397 -73182537 + L1MC4 LINE L1 6426 6983 -919 1803 157 7 7 chr18 12806397 12806683 -73182251 + AluJb SINE Alu 1 286 -26 1765 240 138 83 chr18 12806683 12807231 -73181703 + L1MC4 LINE L1 6983 7725 -177 1930 112 22 0 chr18 12807233 12807352 -73181582 + AluSc SINE Alu 1 116 -193 264 30 0 0 chr18 12807352 12807385 -73181549 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1930 112 22 0 chr18 12807385 12807533 -73181401 + AluSc SINE Alu 116 274 -35 2189 110 7 3 chr18 12807654 12807955 -73180979 - AluSx SINE Alu -10 302 1 1120 174 101 9 chr18 12808192 12808411 -73180523 - MER8 DNA MER2_type 0 239 1 23 0 0 0 chr18 12810163 12810186 -73178748 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr18 12811143 12811172 -73177762 + AT_rich Low_complexity Low_complexity 1 29 0 1881 126 49 3 chr18 12811477 12811762 -73177172 + AluJb SINE Alu 1 298 -14 1114 133 0 28 chr18 12812168 12812348 -73176586 + FRAM SINE Alu 1 167 -9 2038 124 0 3 chr18 12812400 12812731 -73176203 + AluSx SINE Alu 1 330 0 272 170 38 0 chr18 12813044 12813097 -73175837 + HsTC2 DNA Tc2 28 82 -1816 234 0 0 0 chr18 12816165 12816191 -73172743 + (TG)n Simple_repeat Simple_repeat 2 27 0 10676 173 72 63 chr18 12816225 12816272 -73172662 + Tigger1 DNA MER2_type 1 46 -2372 926 187 0 39 chr18 12816272 12816454 -73172480 - FAM SINE Alu 0 175 1 10676 173 72 63 chr18 12816454 12817362 -73171572 + Tigger1 DNA MER2_type 46 945 -1473 872 119 0 0 chr18 12817362 12817480 -73171454 - AluSg/x SINE Alu -17 293 176 10676 173 72 63 chr18 12817480 12818171 -73170763 + Tigger1 DNA MER2_type 945 1628 -790 762 205 72 18 chr18 12818171 12818337 -73170597 - FAM SINE Alu 0 175 1 10676 173 72 63 chr18 12818337 12818862 -73170072 + Tigger1 DNA MER2_type 1628 2315 -103 1456 215 18 4 chr18 12818862 12819141 -73169793 - AluJo SINE Alu -26 286 4 10676 173 72 63 chr18 12819141 12819243 -73169691 + Tigger1 DNA MER2_type 2315 2415 -3 1138 109 60 27 chr18 12819561 12819573 -73169361 + AluSg/x SINE Alu 119 129 -181 2128 116 14 0 chr18 12819573 12819866 -73169068 + AluSx SINE Alu 1 297 -15 1138 109 60 27 chr18 12819866 12820037 -73168897 + AluSg/x SINE Alu 129 308 -2 273 111 44 0 chr18 12820191 12820236 -73168698 - AluJb SINE Alu -20 282 236 290 143 0 0 chr18 12820530 12820579 -73168355 - FAM SINE Alu -7 172 124 1491 183 8 4 chr18 12820628 12820869 -73168065 - AluJb SINE Alu -70 242 1 21 0 0 0 chr18 12821866 12821887 -73167047 + AT_rich Low_complexity Low_complexity 1 21 0 464 332 79 46 chr18 12822228 12822595 -73166339 - L2 LINE L2 -8 3264 2886 229 339 9 17 chr18 12823157 12823272 -73165662 - L2 LINE L2 -1635 1679 1566 249 221 13 78 chr18 12823808 12823885 -73165049 + MIR3 SINE MIR 113 184 -24 938 199 157 13 chr18 12823995 12824307 -73164627 + L1MC4 LINE L1 7685 8041 -1 938 136 0 14 chr18 12824414 12824561 -73164373 - FRAM SINE Alu -11 165 21 21 0 0 0 chr18 12824597 12824618 -73164316 + AT_rich Low_complexity Low_complexity 1 21 0 202 264 0 0 chr18 12826075 12826128 -73162806 + L2 LINE L2 3220 3272 0 460 202 11 0 chr18 12826526 12826620 -73162314 + MER58 DNA MER1_type 179 273 -68 44 20 0 0 chr18 12827208 12827259 -73161675 + AT_rich Low_complexity Low_complexity 1 51 0 222 286 0 0 chr18 12827623 12827686 -73161248 - MIR SINE MIR -17 245 183 1855 148 7 7 chr18 12828206 12828497 -73160437 + AluJb SINE Alu 1 291 -21 1602 201 3 10 chr18 12829068 12829362 -73159572 - AluJo SINE Alu -20 292 1 211 412 79 0 chr18 12829869 12829983 -73158951 - MIR3 SINE MIR -51 157 35 288 0 0 0 chr18 12830341 12830373 -73158561 + (TG)n Simple_repeat Simple_repeat 2 33 0 1886 154 45 12 chr18 12830421 12830753 -73158181 - MER2 DNA MER2_type -1 343 1 443 269 103 0 chr18 12830988 12831144 -73157790 + L1M4b LINE L1 4 175 -6684 2559 44 0 3 chr18 12831177 12831473 -73157461 - AluY SINE Alu -16 295 1 282 316 176 5 chr18 12831585 12831772 -73157162 + L1M4b LINE L1 372 590 -6269 1794 245 61 30 chr18 12831785 12832903 -73156031 + L1M4b LINE L1 1156 2494 -4633 2538 238 49 10 chr18 12832911 12833730 -73155204 + L1M4b LINE L1 3839 4689 -2268 22 35 0 0 chr18 12833829 12833858 -73155076 + AT_rich Low_complexity Low_complexity 1 29 0 2302 114 0 0 chr18 12834187 12834493 -73154441 - AluSx SINE Alu -6 306 1 36 62 0 0 chr18 12834597 12834661 -73154273 + AT_rich Low_complexity Low_complexity 1 64 0 22 35 0 0 chr18 12835709 12835738 -73153196 + AT_rich Low_complexity Low_complexity 1 29 0 1099 225 113 16 chr18 12836362 12836797 -73152137 + L1M4b LINE L1 4943 5419 -1538 46 45 0 0 chr18 12836926 12836993 -73151941 + AT_rich Low_complexity Low_complexity 1 67 0 462 160 120 0 chr18 12837259 12837359 -73151575 + L1MB5 LINE L1 6053 6164 -10 188 326 41 51 chr18 12837893 12837991 -73150943 + L2 LINE L2 3164 3260 -12 2169 143 0 9 chr18 12838213 12838528 -73150406 - AluSx SINE Alu 0 312 1 2063 122 3 16 chr18 12838536 12838839 -73150095 - AluSx SINE Alu -13 299 1 215 177 32 65 chr18 12839918 12839980 -73148954 - L2 LINE L2 -3 3310 3251 2153 96 3 0 chr18 12840459 12840741 -73148193 + AluSx SINE Alu 21 303 -9 468 281 124 27 chr18 12841468 12841888 -73147046 + L1M4b LINE L1 5698 6181 -792 2095 139 3 0 chr18 12841888 12842182 -73146752 + AluSx SINE Alu 1 295 -17 468 281 124 27 chr18 12842182 12842281 -73146653 + L1M4b LINE L1 6181 6269 -704 2097 132 0 10 chr18 12842607 12842903 -73146031 + AluSx SINE Alu 1 293 -19 262 333 133 62 chr18 12843226 12843421 -73145513 + L2 LINE L2 3063 3271 -1 23 86 0 0 chr18 12843613 12843671 -73145263 + AT_rich Low_complexity Low_complexity 1 58 0 1922 151 0 10 chr18 12844761 12845052 -73143882 - AluJb SINE Alu -24 288 1 22 80 0 0 chr18 12845082 12845132 -73143802 + AT_rich Low_complexity Low_complexity 1 50 0 201 333 12 24 chr18 12845464 12845548 -73143386 + L2 LINE L2 3229 3311 -2 402 262 82 0 chr18 12846413 12846535 -73142399 - L2 LINE L2 -4 3309 3178 238 309 80 73 chr18 12846603 12846904 -73142030 - L2 LINE L2 -1247 2067 1765 376 283 128 27 chr18 12847207 12847394 -73141540 + L2 LINE L2 3108 3313 0 4740 241 91 42 chr18 12847708 12847815 -73141119 + L1MEc LINE L1 7 107 -6289 875 210 6 17 chr18 12847815 12847991 -73140943 + FAM SINE Alu 1 174 -1 4740 241 91 42 chr18 12847991 12849570 -73139364 + L1MEc LINE L1 107 1830 -4566 2049 165 0 0 chr18 12849570 12849879 -73139055 + AluJb SINE Alu 1 309 -3 4740 241 91 42 chr18 12849879 12850403 -73138531 + L1MEc LINE L1 1830 2327 -4069 225 266 64 73 chr18 12850486 12850595 -73138339 + MIR3 SINE MIR 98 205 -3 305 352 23 16 chr18 12850700 12850828 -73138106 - MER5A DNA MER1_type -2 187 59 217 353 45 23 chr18 12850738 12850871 -73138063 + MER5A DNA MER1_type 51 186 -3 * 180 0 0 0 chr18 12851023 12851043 -73137891 + (A)n Simple_repeat Simple_repeat 1 20 0 545 247 65 42 chr18 12851047 12851415 -73137519 + L1MEc LINE L1 2055 2395 -3820 1798 159 7 23 chr18 12851415 12851724 -73137210 + AluJb SINE Alu 1 304 -8 545 247 65 42 chr18 12851724 12851791 -73137143 + L1MEc LINE L1 2395 2459 -3756 2039 138 0 10 chr18 12852064 12852362 -73136572 + AluSx SINE Alu 1 295 -17 1793 113 0 0 chr18 12852377 12852616 -73136318 - AluSx SINE Alu -73 239 1 2097 88 0 48 chr18 12853073 12853399 -73135535 + AluY SINE Alu 1 312 0 186 103 0 0 chr18 12853490 12853519 -73135415 + (T)n Simple_repeat Simple_repeat 1 29 0 3615 24 5 0 chr18 12853528 12853954 -73134980 - L1PA4 LINE L1 -3 6152 5725 624 236 13 88 chr18 12853954 12854331 -73134603 + L1MC4 LINE L1 7694 8042 0 218 143 48 0 chr18 12854534 12854576 -73134358 - L3 LINE CR1 -10 1567 1524 198 103 0 0 chr18 12854863 12854892 -73134042 + (TTCC)n Simple_repeat Simple_repeat 3 31 0 913 191 37 9 chr18 12854893 12855108 -73133826 - L1MA8 LINE L1 -11 6280 6060 2091 121 7 7 chr18 12855309 12855598 -73133336 + AluSx SINE Alu 1 289 -23 204 293 107 0 chr18 12855804 12855879 -73133055 - L3 LINE CR1 -319 1258 1176 2936 92 74 14 chr18 12856907 12857341 -73131593 + LTR46 LTR ERV1 1 460 0 363 216 0 12 chr18 12857402 12857490 -73131444 - AluS SINE Alu -245 58 1 212 270 27 40 chr18 12857716 12857790 -73131144 - MIR3 SINE MIR -15 193 121 433 264 136 0 chr18 12857970 12858095 -73130839 - MER5A DNA MER1_type 0 189 48 390 43 0 0 chr18 12858096 12858143 -73130791 - LTR46 LTR ERV1 -182 278 232 2065 141 0 3 chr18 12858388 12858686 -73130248 - AluSx SINE Alu -15 297 1 667 149 0 0 chr18 12858711 12858825 -73130109 + L1MB7 LINE L1 5811 5924 -260 27 0 0 0 chr18 12859323 12859350 -73129584 + AT_rich Low_complexity Low_complexity 1 27 0 223 283 101 20 chr18 12859482 12859581 -73129353 + L2 LINE L2 3152 3258 -14 1085 167 99 5 chr18 12859654 12859695 -73129239 - MLT2D LTR ERVL 0 414 378 408 118 0 0 chr18 12859695 12859763 -73129171 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 1085 167 99 5 chr18 12859763 12859942 -73128992 - MLT2D LTR ERVL -36 378 173 1351 62 0 0 chr18 12859942 12860103 -73128831 + AluY SINE Alu 134 294 -17 846 177 57 0 chr18 12860103 12860278 -73128656 - MLT2D LTR ERVL -229 185 1 2150 105 0 7 chr18 12860278 12860563 -73128371 + AluSc SINE Alu 1 283 -26 21 0 0 0 chr18 12860563 12860584 -73128350 + AT_rich Low_complexity Low_complexity 1 21 0 1777 117 114 4 chr18 12861577 12861850 -73127084 - AluSx SINE Alu -9 303 1 2295 101 0 0 chr18 12862279 12862576 -73126358 - AluSx SINE Alu -15 297 1 295 266 43 0 chr18 12863225 12863319 -73125615 + MER81 DNA DNA 2 99 -15 408 40 0 0 chr18 12863368 12863418 -73125516 + (CA)n Simple_repeat Simple_repeat 1 50 0 201 345 28 35 chr18 12863463 12863605 -73125329 - MIR SINE MIR -114 148 8 976 163 130 18 chr18 12863787 12864201 -73124733 + LTR54B LTR ERV1 3 492 -6 1331 127 108 0 chr18 12864316 12864529 -73124405 + MER46A DNA MER2_type 1 236 0 264 59 0 0 chr18 12866030 12866064 -73122870 + (GGAA)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr18 12869038 12869059 -73119875 + GC_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr18 12869121 12869152 -73119782 + GC_rich Low_complexity Low_complexity 1 31 0 196 248 160 0 chr18 12870957 12871056 -73117878 + MIR SINE MIR 37 154 -108 2166 94 0 17 chr18 12871358 12871672 -73117262 + AluSx SINE Alu 1 309 0 740 145 0 0 chr18 12871977 12872094 -73116840 - FRAM SINE Alu -17 159 43 1262 162 0 15 chr18 12872173 12872377 -73116557 - AluJb SINE Alu -25 287 87 228 235 0 20 chr18 12873430 12873481 -73115453 + GA-rich Low_complexity Low_complexity 3 52 0 275 284 147 16 chr18 12873860 12874050 -73114884 + L3 LINE CR1 1352 1566 -11 1800 170 50 33 chr18 12874474 12874833 -73114101 - MLT1A1 LTR MaLR 0 365 1 2157 125 33 30 chr18 12874978 12875314 -73113620 - MER1B DNA MER1_type 0 337 1 1496 252 75 40 chr18 12876206 12876317 -73112617 - L1MC4 LINE L1 0 8042 7936 2155 125 3 10 chr18 12876317 12876620 -73112314 - AluSx SINE Alu -11 301 1 1496 252 75 40 chr18 12876620 12877084 -73111850 - L1MC4 LINE L1 -106 7936 7447 203 266 108 50 chr18 12877217 12877356 -73111578 - L2 LINE L2 -95 3218 3072 1861 133 7 65 chr18 12877542 12877851 -73111083 - AluJo SINE Alu -21 291 1 893 122 0 0 chr18 12877862 12877985 -73110949 - AluJb SINE Alu -6 306 184 190 133 22 22 chr18 12878449 12878494 -73110440 + GA-rich Low_complexity Low_complexity 5 49 0 214 171 0 0 chr18 12878495 12878530 -73110404 + (CA)n Simple_repeat Simple_repeat 2 36 0 1833 122 32 11 chr18 12878682 12878960 -73109974 - AluJb SINE Alu -3 309 26 2207 123 3 0 chr18 12879046 12879347 -73109587 - AluSq SINE Alu -11 302 1 1587 210 71 3 chr18 12879408 12879746 -73109188 - MLT1A1 LTR MaLR -4 361 1 1017 100 0 0 chr18 12879776 12879906 -73109028 + AluSq/x SINE Alu 1 130 -183 465 367 26 4 chr18 12880100 12880370 -73108564 - L2 LINE L2 -773 2541 2266 1578 154 4 0 chr18 12880577 12880811 -73108123 - AluJb SINE Alu -69 243 9 26 30 0 0 chr18 12880864 12880897 -73108037 + AT_rich Low_complexity Low_complexity 1 33 0 1650 175 10 10 chr18 12880906 12881198 -73107736 + AluJo SINE Alu 4 295 -17 453 126 35 11 chr18 12881497 12881584 -73107350 - L1MB7 LINE L1 0 6184 6096 1756 153 20 23 chr18 12881611 12881912 -73107022 - AluJb SINE Alu -12 300 1 1583 125 213 0 chr18 12881945 12882241 -73106693 - MER47A DNA MER2_type -7 359 1 2228 156 78 18 chr18 12882241 12882691 -73106243 - L1MB8 LINE L1 -80 6596 6120 2336 221 71 103 chr18 12882691 12883524 -73105410 + MER21B LTR ERV1 1 806 -57 4611 199 73 36 chr18 12883537 12884148 -73104786 - L1MB8 LINE L1 -563 6119 5532 2302 115 0 0 chr18 12884148 12884453 -73104481 - AluSx SINE Alu -7 305 1 4611 199 73 36 chr18 12884453 12885399 -73103535 - L1MB8 LINE L1 -1150 5532 4506 2024 149 17 0 chr18 12885399 12885701 -73103233 - AluJb SINE Alu -4 308 2 4611 199 73 36 chr18 12885701 12885794 -73103140 - L1MB8 LINE L1 -2176 4506 4418 2325 217 82 36 chr18 12885789 12886306 -73102628 - L1MB8 LINE L1 -3269 3375 2883 * 2283 118 0 0 chr18 12886306 12886611 -73102323 - AluSx SINE Alu -7 305 1 2325 217 82 36 chr18 12886611 12886663 -73102271 - L1MB8 LINE L1 -3761 2883 2835 848 100 0 8 chr18 12886663 12886793 -73102141 + (TTCC)n Simple_repeat Simple_repeat 4 132 0 2127 95 0 11 chr18 12886794 12887068 -73101866 - AluSc SINE Alu -38 271 1 2325 217 82 36 chr18 12887068 12887640 -73101294 - L1MB8 LINE L1 -3808 2836 2174 854 213 24 0 chr18 12887650 12887814 -73101120 - AluJb SINE Alu -9 303 136 392 250 31 62 chr18 12887814 12887974 -73100960 - L1MB8 LINE L1 -4567 2079 1925 1670 139 0 57 chr18 12887974 12888255 -73100679 - AluJb SINE Alu -7 305 41 1431 186 25 38 chr18 12888260 12888625 -73100309 - L1MB8 LINE L1 -5052 1490 1131 978 147 6 29 chr18 12888625 12888795 -73100139 - AluSg/x SINE Alu -10 300 135 289 237 31 0 chr18 12888797 12888894 -73100040 - L1MB8 LINE L1 -5405 1137 1038 2159 113 0 0 chr18 12889771 12890089 -73098845 - AluSx SINE Alu 0 318 1 198 0 0 0 chr18 12890783 12890805 -73098129 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1752 165 0 0 chr18 12890808 12891075 -73097859 - AluSx SINE Alu -31 281 15 2489 117 11 0 chr18 12891162 12891513 -73097421 + THE1A LTR MaLR 1 355 0 33 25 0 0 chr18 12891771 12891811 -73097123 + AT_rich Low_complexity Low_complexity 1 40 0 524 214 145 51 chr18 12891873 12892030 -73096904 - L1MC5 LINE L1 -199 7762 7574 2200 134 0 0 chr18 12892030 12892335 -73096599 - AluSx SINE Alu -7 305 1 524 214 145 51 chr18 12892335 12892411 -73096523 - L1MC5 LINE L1 -387 7574 7507 4215 164 71 29 chr18 12892496 12892734 -73096200 - L1MC1 LINE L1 -196 6137 5911 1492 189 3 34 chr18 12892734 12893030 -73095904 - AluJb SINE Alu -21 291 5 4215 164 71 29 chr18 12893030 12893603 -73095331 - L1MC1 LINE L1 -422 5911 5279 2312 82 41 0 chr18 12893603 12893897 -73095037 - AluSq SINE Alu -7 306 1 4215 164 71 29 chr18 12893897 12893986 -73094948 - L1MC1 LINE L1 -1054 5279 5195 378 58 39 0 chr18 12894145 12894197 -73094737 + MER21A LTR ERV1 17 70 -861 2802 180 31 118 chr18 12894306 12895016 -73093918 + MER21A LTR ERV1 70 654 -277 3922 152 11 5 chr18 12895016 12895646 -73093288 - MER41B LTR ERV1 0 635 2 2802 180 31 118 chr18 12895646 12895795 -73093139 + MER21A LTR ERV1 654 814 -117 257 154 39 0 chr18 12895959 12896011 -73092923 - L1MC5 LINE L1 -722 7239 7186 5438 136 37 8 chr18 12896025 12896832 -73092102 + MER4D LTR ERV1 1 836 -67 3837 135 48 3 chr18 12896832 12897315 -73091619 + MER41B LTR ERV1 1 518 -117 2403 84 10 0 chr18 12897315 12897623 -73091311 - AluSp SINE Alu -2 311 1 3837 135 48 3 chr18 12897623 12897747 -73091187 + MER41B LTR ERV1 518 635 0 5438 136 37 8 chr18 12897747 12897808 -73091126 + MER4D LTR ERV1 836 894 -9 1775 175 21 3 chr18 12897824 12898115 -73090819 - AluJb SINE Alu -12 300 5 906 194 86 95 chr18 12898116 12898577 -73090357 - L1MC5 LINE L1 -758 7027 6730 1053 254 49 43 chr18 12898647 12898993 -73089941 - MER21B LTR ERV1 -52 811 464 518 136 136 72 chr18 12899002 12899127 -73089807 - AluJo SINE Alu -176 136 4 2078 197 35 12 chr18 12899147 12899579 -73089355 - MER119 DNA MER1_type -137 446 5 23 0 0 0 chr18 12899623 12899646 -73089288 + AT_rich Low_complexity Low_complexity 1 23 0 2176 104 3 0 chr18 12899697 12899984 -73088950 + AluSx SINE Alu 1 288 -24 1344 142 86 4 chr18 12900045 12900277 -73088657 + MER7A DNA MER2_type 2 250 -96 1644 162 36 50 chr18 12900330 12900487 -73088447 - AluJo SINE Alu -13 299 146 2167 95 35 0 chr18 12900487 12900771 -73088163 - AluSc SINE Alu -15 294 1 1644 162 36 50 chr18 12900771 12900916 -73088018 - AluJo SINE Alu -166 146 1 1131 178 56 70 chr18 12901417 12901703 -73087231 + MER68 LTR ERV1 281 562 0 685 254 191 40 chr18 12901780 12902108 -73086826 - HAL1 LINE L1 -134 2373 2096 1809 163 13 3 chr18 12902108 12902408 -73086526 - AluJo SINE Alu -9 303 1 685 254 191 40 chr18 12902408 12902728 -73086206 - HAL1 LINE L1 -411 2096 1627 5015 54 24 11 chr18 12902728 12903008 -73085926 + MER11A LTR ERVK 1 276 -990 2407 76 0 16 chr18 12903008 12903322 -73085612 + AluY SINE Alu 1 309 -2 5015 54 24 11 chr18 12903322 12904060 -73084874 + MER11A LTR ERVK 276 1266 0 645 237 101 47 chr18 12904088 12904366 -73084568 - HAL1 LINE L1 -927 1580 1288 237 191 0 0 chr18 12905240 12905287 -73083647 - HAL1 LINE L1 -1057 1450 1404 1911 171 0 0 chr18 12905320 12905625 -73083309 - AluSx SINE Alu -7 305 1 1916 202 168 49 chr18 12905700 12906414 -73082520 - L1ME2 LINE L1 -1 6557 5929 2626 150 17 13 chr18 12906414 12906873 -73082061 - MER65C LTR ERV1 0 461 1 1916 202 168 49 chr18 12906873 12906968 -73081966 - L1ME2 LINE L1 -629 5929 5847 284 0 28 0 chr18 12906968 12907004 -73081930 + (CA)n Simple_repeat Simple_repeat 2 38 0 1916 202 168 49 chr18 12907004 12907038 -73081896 - L1ME2 LINE L1 -711 5847 5589 649 218 35 0 chr18 12907038 12907180 -73081754 - AluJb SINE Alu 0 312 166 1229 253 104 7 chr18 12907189 12907612 -73081322 - L1ME2 LINE L1 -934 5606 5143 808 206 27 92 chr18 12907621 12907883 -73081051 - L1ME2 LINE L1 -6256 284 40 1969 159 22 35 chr18 12908191 12908561 -73080373 - MLT1A1 LTR MaLR 0 365 1 397 284 35 9 chr18 12909083 12909199 -73079735 + MIR SINE MIR 55 173 -89 548 243 40 13 chr18 12909599 12909756 -73079178 - L1MB8 LINE L1 0 6178 6006 2324 77 19 29 chr18 12910097 12910407 -73078527 + AluY SINE Alu 1 307 -4 2214 110 7 0 chr18 12910420 12910721 -73078213 + AluSq SINE Alu 1 303 -10 313 217 83 17 chr18 12910816 12910936 -73077998 - L1ME4a LINE L1 0 6121 5994 21 0 0 0 chr18 12910951 12910972 -73077962 + AT_rich Low_complexity Low_complexity 1 21 0 1854 151 0 62 chr18 12911071 12911244 -73077690 - AluJb SINE Alu -8 304 159 2002 46 4 0 chr18 12911244 12911485 -73077449 - L1PA5 LINE L1 -4 6150 5909 1854 151 0 62 chr18 12911485 12911635 -73077299 - AluJb SINE Alu -153 159 1 690 281 110 40 chr18 12911761 12912259 -73076675 - L1ME4a LINE L1 -2021 5787 5255 2396 94 0 3 chr18 12912393 12912700 -73076234 + AluSq SINE Alu 1 306 -7 602 271 92 4 chr18 12912706 12912935 -73075999 + L1MC4a LINE L1 6209 6457 -1351 29 28 0 0 chr18 12913051 12913087 -73075847 + AT_rich Low_complexity Low_complexity 1 36 0 2064 134 3 0 chr18 12913814 12914137 -73074797 - AluSx SINE Alu 0 324 1 1091 168 220 13 chr18 12914385 12914617 -73074317 + AluJo SINE Alu 1 280 -32 285 285 224 22 chr18 12914920 12915099 -73073835 - L1ME3 LINE L1 -20 6142 5928 2388 138 8 32 chr18 12915144 12915184 -73073750 - MER57A LTR ERV1 0 403 364 2283 120 0 0 chr18 12915184 12915492 -73073442 - AluSx SINE Alu -4 308 1 2388 138 8 32 chr18 12915492 12915851 -73073083 - MER57A LTR ERV1 -39 364 14 1072 247 101 18 chr18 12915852 12916249 -73072685 - L1ME3 LINE L1 -303 5867 5438 1327 138 87 5 chr18 12916701 12916919 -73072015 + MER46A DNA MER2_type 1 236 0 261 305 4 34 chr18 12917448 12917607 -73071327 + A-rich Low_complexity Low_complexity 2 254 0 2420 93 0 0 chr18 12918109 12918419 -73070515 - AluSx SINE Alu 0 312 3 547 178 0 4 chr18 12918615 12918751 -73070183 - U2 snRNA snRNA 0 188 4 809 94 19 0 chr18 12919094 12919200 -73069734 + FRAM SINE Alu 44 151 -25 32 47 0 16 chr18 12919502 12919549 -73069385 + AT_rich Low_complexity Low_complexity 1 48 -15 2243 103 3 3 chr18 12919549 12919850 -73069084 + AluSc SINE Alu 1 301 -8 32 47 0 16 chr18 12919850 12919866 -73069068 + AT_rich Low_complexity Low_complexity 48 63 0 2239 111 7 10 chr18 12921389 12921696 -73067238 - AluSq SINE Alu 0 313 8 2237 121 0 10 chr18 12921832 12922145 -73066789 - AluSx SINE Alu -2 310 1 1992 150 3 7 chr18 12922147 12922453 -73066481 - AluJb SINE Alu -7 305 1 1541 168 73 4 chr18 12923765 12924039 -73064895 + AluJo SINE Alu 1 293 -19 2182 103 0 10 chr18 12924454 12924745 -73064189 + AluSx SINE Alu 1 288 -24 433 279 153 22 chr18 12925410 12925632 -73063302 + MIR SINE MIR 2 252 -10 340 333 9 0 chr18 12925651 12925759 -73063175 - MIR SINE MIR -105 157 49 234 0 0 0 chr18 12925806 12925832 -73063102 + (TG)n Simple_repeat Simple_repeat 2 27 0 676 165 75 15 chr18 12926412 12926545 -73062389 - FLAM_C SINE Alu -1 142 2 2146 124 24 0 chr18 12926689 12926987 -73061947 - AluJo SINE Alu -7 305 1 274 184 70 63 chr18 12928011 12928183 -73060751 + L1M4 LINE L1 4289 4571 -1575 2677 227 118 33 chr18 12928221 12928566 -73060368 + L1MB1 LINE L1 3850 4164 -2025 3034 110 44 62 chr18 12928566 12929086 -73059848 - MER9 LTR ERVK 0 511 1 2677 227 118 33 chr18 12929086 12929600 -73059334 + L1MB1 LINE L1 4164 4633 -1556 2581 54 0 0 chr18 12929600 12929897 -73059037 - AluY SINE Alu -13 298 2 2677 227 118 33 chr18 12929897 12930814 -73058120 + L1MB1 LINE L1 4633 5889 -300 2045 225 82 11 chr18 12930468 12931005 -73057929 + L1ME1 LINE L1 5527 6101 -65 * 2239 94 0 26 chr18 12931470 12931779 -73057155 - AluSq SINE Alu -12 301 1 193 250 0 0 chr18 12932258 12932306 -73056628 - L2 LINE L2 -1 3312 3265 2357 85 7 0 chr18 12932997 12933291 -73055643 + AluSx SINE Alu 1 296 -16 2110 118 7 13 chr18 12939475 12939779 -73049155 - AluSx SINE Alu -8 304 3 228 214 36 0 chr18 12940122 12940178 -73048756 - MIR SINE MIR -65 143 86 279 242 0 66 chr18 12940705 12940796 -73048138 - MER53 DNA DNA -5 184 100 21 36 0 0 chr18 12941339 12941367 -73047567 + AT_rich Low_complexity Low_complexity 1 28 0 195 233 279 12 chr18 12941482 12941568 -73047366 + MER5A DNA MER1_type 78 186 -3 2220 107 0 16 chr18 12941575 12941883 -73047051 + AluSg SINE Alu 1 303 -7 2405 37 0 30 chr18 12942580 12942877 -73046057 - AluY SINE Alu -23 288 1 1033 161 30 89 chr18 12942930 12943234 -73045700 + AluSx SINE Alu 1 286 -16 363 199 60 18 chr18 12943547 12943713 -73045221 + (CA)n Simple_repeat Simple_repeat 1 173 0 2549 40 0 13 chr18 12943909 12944210 -73044724 + AluY SINE Alu 1 297 -14 1453 147 155 0 chr18 12944227 12944478 -73044456 + AluSx SINE Alu 2 291 -11 1688 199 122 54 chr18 12944856 12945148 -73043786 + Charlie2 DNA MER1_type 2074 2345 -517 1278 151 123 42 chr18 12945148 12945432 -73043502 - AluJb SINE Alu -4 308 2 1688 199 122 54 chr18 12945432 12945876 -73043058 + Charlie2 DNA MER1_type 2345 2860 -2 287 211 22 44 chr18 12946556 12946646 -73042288 - MER103 DNA DNA -35 131 44 1439 212 187 68 chr18 12946896 12947731 -73041203 + L1MC4 LINE L1 7068 7995 0 1128 204 10 0 chr18 12947905 12948106 -73040828 + MER58A DNA MER1_type 2 204 -20 214 181 14 14 chr18 12948306 12948378 -73040556 + (TA)n Simple_repeat Simple_repeat 1 72 0 1975 162 0 7 chr18 12948725 12949034 -73039900 + AluJb SINE Alu 1 307 -5 1935 191 85 30 chr18 12949104 12949421 -73039513 + L1ME LINE L1 5257 5610 -556 2397 93 6 3 chr18 12949421 12949732 -73039202 - AluSx SINE Alu 0 312 1 1935 191 85 30 chr18 12949732 12949885 -73039049 + L1ME LINE L1 5610 5753 -413 245 222 111 74 chr18 12949885 12950020 -73038914 - MIR SINE MIR -121 141 2 198 71 0 0 chr18 12950693 12950721 -73038213 + (TC)n Simple_repeat Simple_repeat 1 28 0 2156 90 21 14 chr18 12952119 12952407 -73036527 - AluSc SINE Alu -19 290 1 261 0 0 0 chr18 12952516 12952545 -73036389 + (CA)n Simple_repeat Simple_repeat 2 30 0 2554 50 3 7 chr18 12953378 12953676 -73035258 + AluSp SINE Alu 1 297 -16 635 234 62 16 chr18 12953810 12954002 -73034932 - MIR SINE MIR -29 233 33 215 329 0 0 chr18 12954046 12954116 -73034818 + L2 LINE L2 3156 3225 -47 24 77 0 0 chr18 12955789 12955841 -73033093 + GC_rich Low_complexity Low_complexity 1 52 0 57 61 0 0 chr18 12955952 12956051 -73032883 + GC_rich Low_complexity Low_complexity 1 99 0 224 245 32 11 chr18 12956171 12956277 -73032657 + (CGGG)n Simple_repeat Simple_repeat 1 108 0 215 137 59 0 chr18 12956315 12956366 -73032568 + (CCCCG)n Simple_repeat Simple_repeat 3 56 0 27 29 0 0 chr18 12956533 12956567 -73032367 + GC_rich Low_complexity Low_complexity 1 34 0 226 322 116 0 chr18 12956996 12957117 -73031817 + MIR SINE MIR 128 262 0 1555 181 9 50 chr18 12957901 12958222 -73030712 - AluJo SINE Alu -4 308 1 1982 149 0 3 chr18 12958993 12959295 -73029639 - AluJb SINE Alu -11 301 1 665 105 0 0 chr18 12959635 12959721 -73029213 - U6 snRNA snRNA -21 86 1 2167 122 0 13 chr18 12959822 12960133 -73028801 + AluSx SINE Alu 1 307 -5 2336 68 14 3 chr18 12960193 12960486 -73028448 + AluY SINE Alu 1 296 -15 403 91 39 26 chr18 12960674 12960696 -73028238 + A-rich Low_complexity Low_complexity 3 23 -57 231 36 0 0 chr18 12960696 12960724 -73028210 + (GGGA)n Simple_repeat Simple_repeat 1 28 0 403 91 39 26 chr18 12960724 12960778 -73028156 + A-rich Low_complexity Low_complexity 23 80 0 342 207 51 40 chr18 12961644 12961773 -73027161 - L1MD2 LINE L1 -10 7985 6246 1238 113 0 78 chr18 12961810 12962014 -73026920 - AluSg/x SINE Alu 0 312 125 2133 102 27 7 chr18 12962558 12962851 -73026083 + AluSq SINE Alu 1 299 -14 1419 128 0 5 chr18 12962990 12963193 -73025741 + AluJb SINE Alu 85 286 -26 302 321 44 7 chr18 12963456 12963593 -73025341 + MIR SINE MIR 47 188 -74 1917 161 74 0 chr18 12964213 12964536 -73024398 - MER7A DNA MER2_type 0 346 2 2969 96 10 0 chr18 12964630 12965036 -73023898 - L1PA8 LINE L1 -13 6159 5750 2009 180 55 5 chr18 12965061 12965445 -73023489 + MER57A LTR ERV1 1 403 0 2242 112 0 3 chr18 12965449 12965744 -73023190 - AluSx SINE Alu -18 294 1 2384 98 3 0 chr18 12965757 12966064 -73022870 - AluSx SINE Alu -4 308 1 185 182 23 0 chr18 12966237 12966281 -73022653 + MIR3 SINE MIR 114 158 -50 28 0 0 0 chr18 12966956 12966984 -73021950 + AT_rich Low_complexity Low_complexity 1 28 0 1653 160 36 33 chr18 12967967 12968274 -73020660 + MER7A DNA MER2_type 41 346 0 264 59 0 0 chr18 12971854 12971888 -73017046 + (TTCC)n Simple_repeat Simple_repeat 2 35 0 1345 123 113 0 chr18 12973389 12973601 -73015333 - MER46A DNA MER2_type 0 236 1 1113 161 129 18 chr18 12973716 12974130 -73014804 - LTR54B LTR ERV1 -6 492 3 447 52 0 0 chr18 12974496 12974554 -73014380 + (TG)n Simple_repeat Simple_repeat 1 58 0 312 266 43 0 chr18 12974603 12974697 -73014237 - MER81 DNA DNA -15 99 2 2293 104 0 0 chr18 12975346 12975643 -73013291 + AluSx SINE Alu 1 297 -15 2243 93 27 7 chr18 12976072 12976372 -73012562 + AluSx SINE Alu 1 306 -6 888 138 0 0 chr18 12977004 12977134 -73011800 - FLAM_C SINE Alu -3 130 1 2236 97 3 13 chr18 12977328 12977646 -73011288 + AluSq SINE Alu 1 313 0 2683 156 17 55 chr18 12977655 12977707 -73011227 - L1MB8 LINE L1 -2 6176 6124 1993 164 0 0 chr18 12977707 12978018 -73010916 + AluJb SINE Alu 1 311 -1 2683 156 17 55 chr18 12978018 12978549 -73010385 - L1MB8 LINE L1 -54 6124 5615 535 200 0 0 chr18 12978549 12978649 -73010285 - AluJb SINE Alu 0 312 213 2634 53 0 0 chr18 12978671 12978974 -73009960 - AluY SINE Alu -8 303 1 537 220 9 0 chr18 12978976 12979085 -73009849 - L1MB8 LINE L1 -571 5613 5504 550 220 25 125 chr18 12979108 12979198 -73009736 + L1ME3A LINE L1 4190 4287 -1859 2302 71 0 4 chr18 12979198 12979479 -73009455 + AluY SINE Alu 28 307 -4 1794 175 7 3 chr18 12979488 12979773 -73009161 + AluJo SINE Alu 1 286 -26 550 220 25 125 chr18 12979773 12980024 -73008910 + L1ME3A LINE L1 4295 4569 -1577 2393 86 0 3 chr18 12980024 12980325 -73008609 + AluSx SINE Alu 1 300 -12 550 220 25 125 chr18 12980325 12980437 -73008497 + L1ME3A LINE L1 4569 4608 -1538 2165 109 3 0 chr18 12980437 12980749 -73008185 - AluSx SINE Alu 0 313 1 550 220 25 125 chr18 12980749 12980763 -73008171 + L1ME3A LINE L1 4608 4622 -1524 935 220 54 17 chr18 12980764 12981005 -73007929 - MLT1D LTR MaLR -84 421 172 2087 104 25 21 chr18 12981005 12981310 -73007624 - AluSx SINE Alu 0 307 2 705 270 24 73 chr18 12981345 12981798 -73007136 + L1ME3A LINE L1 4621 5052 -1094 2384 102 3 13 chr18 12981798 12982113 -73006821 + AluSq SINE Alu 1 312 -1 277 185 0 0 chr18 12982133 12982187 -73006747 + L1ME3A LINE L1 5040 5093 -1053 186 43 0 0 chr18 12982189 12982212 -73006722 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 824 145 0 0 chr18 12982219 12982336 -73006598 - FLAM_C SINE Alu -25 118 2 2075 245 91 42 chr18 12982340 12982752 -73006182 + L1ME3A LINE L1 5083 5474 -696 2052 203 63 15 chr18 12982752 12983230 -73005704 - MLT1D LTR MaLR -4 501 1 2075 245 91 42 chr18 12983230 12983253 -73005681 + L1ME3A LINE L1 5474 5494 -676 2405 112 0 0 chr18 12983253 12983565 -73005369 - AluSx SINE Alu 0 312 1 2075 245 91 42 chr18 12983565 12984046 -73004888 + L1ME3A LINE L1 5494 6048 -122 1963 151 7 0 chr18 12984052 12984357 -73004577 - AluSx SINE Alu -5 307 1 1989 152 0 3 chr18 12984647 12984950 -73003984 - AluJo SINE Alu -10 302 1 272 250 0 15 chr18 12985440 12985508 -73003426 + GA-rich Low_complexity Low_complexity 2 68 0 220 279 36 27 chr18 12985911 12986022 -73002912 + MIR SINE MIR 23 134 -128 218 229 16 16 chr18 12986055 12986116 -73002818 - L2 LINE L2 -63 3250 3190 * 300 279 57 41 chr18 12986110 12986232 -73002702 - MIR3 SINE MIR -49 159 36 1093 202 0 0 chr18 12986341 12986534 -73002400 + MER2 DNA MER2_type 1 193 -152 1955 124 33 0 chr18 12986569 12986842 -73002092 - AluSx SINE Alu -26 286 5 615 266 6 0 chr18 12986906 12987064 -73001870 + MIR SINE MIR 91 249 -13 23 0 0 0 chr18 12987760 12987783 -73001151 + AT_rich Low_complexity Low_complexity 1 23 0 2036 142 3 3 chr18 12987848 12988144 -73000790 - AluJb SINE Alu -16 296 1 21 36 0 0 chr18 12988869 12988897 -73000037 + AT_rich Low_complexity Low_complexity 1 28 0 2286 102 0 3 chr18 12989031 12989325 -72999609 + AluSq SINE Alu 1 293 -20 190 172 45 25 chr18 12989376 12989533 -72999401 + (TA)n Simple_repeat Simple_repeat 2 161 0 2392 104 0 0 chr18 12989634 12989942 -72998992 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr18 12990000 12990021 -72998913 + AT_rich Low_complexity Low_complexity 1 21 0 3582 175 11 30 chr18 12990021 12990164 -72998770 + L1MB3 LINE L1 5321 5465 -718 2446 117 44 3 chr18 12990164 12990524 -72998410 - THE1C LTR MaLR 0 375 1 3582 175 11 30 chr18 12990524 12990765 -72998169 + L1MB3 LINE L1 5465 5709 -474 2430 136 42 42 chr18 12990765 12991193 -72997741 - MSTA LTR MaLR 0 428 1 3582 175 11 30 chr18 12991193 12991472 -72997462 + L1MB3 LINE L1 5709 5974 -209 2278 119 3 3 chr18 12991472 12991783 -72997151 + AluSx SINE Alu 1 311 -1 3582 175 11 30 chr18 12991783 12991819 -72997115 + L1MB3 LINE L1 5974 6009 -174 688 117 0 17 chr18 12991820 12991940 -72996994 + (GAAA)n Simple_repeat Simple_repeat 2 119 0 396 224 0 9 chr18 12991940 12992047 -72996887 + L1MB3 LINE L1 5953 6058 -125 1529 179 10 28 chr18 12992759 12992889 -72996045 + AluJo SINE Alu 12 143 -169 2051 132 0 4 chr18 12992889 12993221 -72995713 + AluSg SINE Alu 1 331 0 1529 179 10 28 chr18 12993221 12993380 -72995554 + AluJo SINE Alu 143 297 -15 259 170 0 0 chr18 12994476 12994523 -72994411 - MER5A DNA MER1_type -1 188 142 921 182 0 7 chr18 12994560 12994714 -72994220 + AluSg/x SINE Alu 134 286 -26 1417 152 79 73 chr18 12994714 12994896 -72994038 - L1MA4 LINE L1 -10 6290 6104 2196 92 0 3 chr18 12994896 12995178 -72993756 - AluSx SINE Alu -25 287 7 1417 152 79 73 chr18 12995178 12995325 -72993609 - L1MA4 LINE L1 -196 6104 5959 854 179 0 0 chr18 12995325 12995476 -72993458 - MER5A DNA MER1_type -38 151 1 1249 164 14 5 chr18 12996107 12996314 -72992620 + AluJo SINE Alu 85 293 -19 2151 180 42 8 chr18 12996369 12996409 -72992525 - MLT2D LTR ERVL 0 414 377 1311 39 17 0 chr18 12996409 12996639 -72992295 + (TAGA)n Simple_repeat Simple_repeat 1 234 0 2151 180 42 8 chr18 12996639 12996996 -72991938 - MLT2D LTR ERVL -37 377 1 1402 179 31 31 chr18 12997157 12997447 -72991487 + AluJo SINE Alu 1 290 -22 189 74 0 0 chr18 12997457 12997484 -72991450 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 228 284 23 11 chr18 12997614 12997702 -72991232 + L2 LINE L2 3225 3313 0 2064 117 13 42 chr18 12997858 12998165 -72990769 + AluSx SINE Alu 1 298 -14 233 368 11 0 chr18 12999514 12999609 -72989325 + MIR SINE MIR 161 256 -6 2294 84 7 0 chr18 12999897 13000184 -72988750 - AluSx SINE Alu -23 289 1 1999 85 4 8 chr18 13000354 13000612 -72988322 - AluSq SINE Alu -26 287 31 258 235 0 0 chr18 13000612 13000663 -72988271 + LTR30 LTR ERV1 1 51 -671 1133 114 9 99 chr18 13000664 13000888 -72988046 + LTR12 LTR ERV1 94 282 -432 323 250 11 0 chr18 13000889 13000981 -72987953 + LTR30 LTR ERV1 550 642 -80 678 120 0 0 chr18 13000984 13001084 -72987850 + LTR12 LTR ERV1 615 714 0 237 240 0 0 chr18 13001084 13001134 -72987800 - Alu SINE Alu -134 169 120 1883 209 123 9 chr18 13001360 13001825 -72987109 - MLT2B1 LTR ERVL -2 518 1 1769 176 0 7 chr18 13002027 13002305 -72986629 + AluJo SINE Alu 1 276 -36 2444 88 0 16 chr18 13002313 13002630 -72986304 - AluSx SINE Alu 0 312 1 717 271 24 71 chr18 13002630 13003083 -72985851 - L1M4 LINE L1 -1094 5052 4621 2088 104 25 21 chr18 13003118 13003423 -72985511 + AluSx SINE Alu 2 307 0 935 220 54 17 chr18 13003423 13003664 -72985270 + MLT1D LTR MaLR 172 421 -84 300 233 8 83 chr18 13003665 13003679 -72985255 - L1M4 LINE L1 -1524 4622 4609 2166 109 3 0 chr18 13003679 13003991 -72984943 + AluSx SINE Alu 1 313 0 300 233 8 83 chr18 13003991 13004095 -72984839 - L1M4 LINE L1 -1537 4609 4512 1297 97 11 0 chr18 13004103 13004278 -72984656 - AluY SINE Alu -11 300 124 540 273 30 0 chr18 13004279 13004411 -72984523 - MER69 DNA AcHobo -1090 136 1 221 354 107 6 chr18 13004627 13004805 -72984129 + MIR SINE MIR 23 218 -44 2248 116 0 22 chr18 13004805 13005124 -72983810 + AluSx SINE Alu 1 312 0 297 210 190 0 chr18 13005575 13005675 -72983259 + L1MC5 LINE L1 7710 7828 -133 2345 99 3 0 chr18 13006019 13006323 -72982611 - AluY SINE Alu -6 305 1 1945 183 80 47 chr18 13006821 13007308 -72981626 - MLT1D LTR MaLR -2 503 1 278 268 110 16 chr18 13007770 13007809 -72981125 - MIR3 SINE MIR -15 193 159 225 0 0 0 chr18 13007809 13007834 -72981100 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 278 268 110 16 chr18 13007834 13007921 -72981013 - MIR3 SINE MIR -49 159 55 1664 142 96 4 chr18 13007932 13008213 -72980721 - AluSx SINE Alu -5 307 1 219 69 0 0 chr18 13008307 13008336 -72980598 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2185 102 0 11 chr18 13008338 13008622 -72980312 - AluSg SINE Alu -29 281 1 1082 183 105 75 chr18 13009700 13010034 -72978900 - MER2 DNA MER2_type 0 344 1 182 220 120 0 chr18 13010178 13010228 -72978706 - MER5A DNA MER1_type -54 135 80 2186 88 3 3 chr18 13010403 13010686 -72978248 - AluSq SINE Alu 0 313 31 258 235 0 0 chr18 13010686 13010737 -72978197 + LTR30 LTR ERV1 1 51 -671 1133 114 9 99 chr18 13010738 13010962 -72977972 + LTR12 LTR ERV1 94 282 -432 323 250 11 0 chr18 13010963 13011055 -72977879 + LTR30 LTR ERV1 550 642 -80 678 120 0 0 chr18 13011058 13011158 -72977776 + LTR12 LTR ERV1 615 714 0 237 240 0 0 chr18 13011158 13011208 -72977726 - Alu SINE Alu -134 169 120 1869 208 122 11 chr18 13011434 13011900 -72977034 - MLT2B1 LTR ERVL -2 518 1 1798 180 0 7 chr18 13012102 13012396 -72976538 + AluJo SINE Alu 1 292 -20 642 218 30 44 chr18 13012417 13012601 -72976333 - L1MD3 LINE L1 -1060 6798 6571 1928 152 3 16 chr18 13012601 13012904 -72976030 - AluSq SINE Alu -14 299 1 642 218 30 44 chr18 13012904 13012980 -72975954 - L1MD3 LINE L1 -1287 6571 6495 800 248 92 27 chr18 13013090 13013385 -72975549 + MLT2F LTR ERVL 3 316 -347 820 230 46 0 chr18 13013426 13013622 -72975312 + MLT2F LTR ERVL 457 661 -2 1070 200 0 0 chr18 13013869 13014054 -72974880 - AluJo SINE Alu -4 308 124 2326 88 0 26 chr18 13014862 13015169 -72973765 + AluSc SINE Alu 1 299 -10 185 314 49 20 chr18 13015748 13015850 -72973084 + MIR SINE MIR 116 220 -42 602 223 16 0 chr18 13015888 13016009 -72972925 - FLAM_A SINE Alu -10 123 1 1893 190 80 32 chr18 13017075 13017351 -72971583 - L1ME LINE L1 -382 5853 5592 184 42 0 0 chr18 13017351 13017375 -72971559 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2133 91 18 4 chr18 13017375 13017650 -72971284 - AluSp SINE Alu -1 307 6 1893 190 80 32 chr18 13017650 13018206 -72970728 - L1ME LINE L1 -642 5593 4988 649 178 23 0 chr18 13018204 13018333 -72970601 - L1ME LINE L1 -2075 4140 4009 * 1799 192 41 82 chr18 13018376 13018521 -72970413 - L1MEc LINE L1 -3506 2709 2560 2234 107 0 3 chr18 13018521 13018810 -72970124 - AluSx SINE Alu -24 288 1 1799 192 41 82 chr18 13018810 13019103 -72969831 - L1MEc LINE L1 -3655 2560 2257 1984 147 0 0 chr18 13019103 13019388 -72969546 - AluSx SINE Alu -17 295 11 1799 192 41 82 chr18 13019388 13019668 -72969266 - L1MEc LINE L1 -3958 2257 2069 1871 152 18 0 chr18 13019668 13019971 -72968963 - AluSx SINE Alu 0 308 1 1799 192 41 82 chr18 13019971 13020095 -72968839 - L1MEc LINE L1 -4146 2069 1941 360 272 112 24 chr18 13021468 13021674 -72967260 - L1MEc LINE L1 -4442 1954 1731 311 256 56 11 chr18 13021694 13021784 -72967150 - L1MC5 LINE L1 -36 7925 7832 26 50 0 0 chr18 13021824 13021864 -72967070 + AT_rich Low_complexity Low_complexity 1 40 0 670 301 20 17 chr18 13021949 13022295 -72966639 - L1MEc LINE L1 -4642 1754 1408 1973 200 82 6 chr18 13022307 13022564 -72966370 - L1M4 LINE L1 -1068 5889 5653 207 0 0 0 chr18 13022564 13022587 -72966347 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 459 0 0 0 chr18 13022586 13022637 -72966297 + (TG)n Simple_repeat Simple_repeat 2 52 0 1973 200 82 6 chr18 13022587 13022855 -72966079 - L1M4 LINE L1 -1304 5653 5378 7257 225 30 18 chr18 13022860 13024421 -72964513 - L1M4 LINE L1 -5244 1615 36 1628 175 25 28 chr18 13024482 13024768 -72964166 - AluJo SINE Alu -27 285 1 2889 218 107 70 chr18 13024774 13025361 -72963573 - L1MEc LINE L1 -5213 1183 619 1920 177 34 60 chr18 13025361 13025774 -72963160 - MER57A LTR ERV1 -1 402 1 2889 218 107 70 chr18 13025774 13026294 -72962640 - L1MEc LINE L1 -5777 619 35 2254 125 0 0 chr18 13027793 13028098 -72960836 + AluSx SINE Alu 1 305 -7 704 170 15 0 chr18 13028113 13028248 -72960686 - Charlie5 DNA MER1_type 0 2623 2487 1556 171 11 24 chr18 13028291 13028578 -72960356 - AluJb SINE Alu -19 293 11 2151 101 28 0 chr18 13028975 13029262 -72959672 + AluSq SINE Alu 5 299 -14 1404 133 0 5 chr18 13029401 13029604 -72959330 + AluJb SINE Alu 85 286 -26 302 321 44 7 chr18 13029867 13030004 -72958930 + MIR SINE MIR 47 188 -74 1906 161 74 0 chr18 13030624 13030947 -72957987 - MER7A DNA MER2_type 0 346 2 2988 94 10 0 chr18 13031041 13031447 -72957487 - L1PA8 LINE L1 -13 6159 5750 1956 183 57 5 chr18 13031474 13031857 -72957077 + MER57A LTR ERV1 1 403 0 2291 105 0 3 chr18 13031861 13032156 -72956778 - AluSx SINE Alu -18 294 1 2061 135 3 22 chr18 13032169 13032481 -72956453 - AluSx SINE Alu -6 306 1 1047 137 28 75 chr18 13032493 13032705 -72956229 - AluJb SINE Alu -26 286 85 499 293 104 11 chr18 13033059 13033375 -72955559 + L1MC4 LINE L1 6177 6438 -1370 522 267 50 6 chr18 13033439 13033600 -72955334 + L1MC4a LINE L1 6629 6796 -1012 2265 114 3 0 chr18 13033602 13033900 -72955034 - AluSx SINE Alu -13 299 1 531 211 167 0 chr18 13033919 13034075 -72954859 + L1MC4a LINE L1 7212 7393 -415 2804 43 0 0 chr18 13034182 13034535 -72954399 + L1PA7 LINE L1 5810 6162 0 414 292 15 7 chr18 13034583 13034720 -72954214 - MER117 DNA MER1_type -42 155 18 1747 137 27 30 chr18 13035273 13035573 -72953361 - AluJo SINE Alu -13 299 1 2045 142 6 3 chr18 13036993 13037304 -72951630 + AluSx SINE Alu 1 312 0 460 293 165 49 chr18 13038510 13038623 -72950311 - L1MEd LINE L1 -5052 1067 968 207 0 0 0 chr18 13038623 13038646 -72950288 + (TA)n Simple_repeat Simple_repeat 2 24 0 460 293 165 49 chr18 13038646 13038942 -72949992 - L1MEd LINE L1 -5151 968 754 845 251 183 55 chr18 13039985 13040139 -72948795 + MLT1E LTR MaLR 1 134 -459 2144 107 4 4 chr18 13040139 13040448 -72948486 + AluSx SINE Alu 1 309 0 845 251 183 55 chr18 13040448 13040818 -72948116 + MLT1E LTR MaLR 134 593 0 264 172 125 16 chr18 13040869 13040933 -72948001 - MIR SINE MIR -74 188 118 2032 154 3 3 chr18 13041773 13042084 -72946850 + AluJb SINE Alu 1 311 -1 25 51 0 0 chr18 13042165 13042204 -72946730 + AT_rich Low_complexity Low_complexity 1 39 0 1597 179 67 0 chr18 13042776 13043061 -72945873 + AluJo SINE Alu 1 304 -8 205 298 61 69 chr18 13043569 13043831 -72945103 - L2 LINE L2 -93 3179 2920 2431 156 32 14 chr18 13043987 13044430 -72944504 - LTR47A LTR ERVL -1 451 1 275 270 0 14 chr18 13044528 13044602 -72944332 + (CA)n Simple_repeat Simple_repeat 1 73 0 712 268 94 19 chr18 13044625 13045174 -72943760 + MLT2E LTR ERVL 1 627 -1 257 267 0 0 chr18 13045470 13045530 -72943404 - L2 LINE L2 -1 3312 3253 195 318 132 8 chr18 13047070 13047199 -72941735 - MIR SINE MIR -1 261 117 219 364 0 0 chr18 13047353 13047430 -72941504 - L2 LINE L2 0 3313 3237 1958 143 36 18 chr18 13047435 13047670 -72941264 + MER2 DNA MER2_type 1 245 -99 2407 97 0 0 chr18 13047670 13047969 -72940965 + AluSx SINE Alu 1 299 -13 1958 143 36 18 chr18 13047969 13048068 -72940866 + MER2 DNA MER2_type 245 341 -3 2506 137 51 7 chr18 13048664 13049074 -72939860 - MSTC LTR MaLR 0 428 1 658 189 38 19 chr18 13049432 13049591 -72939343 - Charlie7 DNA MER1_type -5 2607 2446 2326 105 0 0 chr18 13049726 13050030 -72938904 + AluSx SINE Alu 1 304 -8 1605 144 4 40 chr18 13050954 13051232 -72937702 + AluJo SINE Alu 45 312 0 560 217 13 38 chr18 13052887 13053044 -72935890 + MIR SINE MIR 109 261 -1 2462 92 0 0 chr18 13053335 13053640 -72935294 - AluSg SINE Alu -5 305 1 1920 133 7 36 chr18 13053733 13054034 -72934900 - AluJo SINE Alu -18 294 3 9533 203 52 9 chr18 13054385 13057538 -72931396 - L1MB5 LINE L1 -15 6159 2871 1586 167 93 16 chr18 13057705 13058083 -72930851 - LTR37A LTR ERV1 -1 425 19 183 156 0 0 chr18 13059351 13059383 -72929551 + GA-rich Low_complexity Low_complexity 3 34 0 903 267 102 0 chr18 13059834 13060205 -72928729 + MER110A LTR ERV1 60 468 0 2447 84 3 3 chr18 13060847 13061157 -72927777 - AluSq SINE Alu -3 310 1 2401 86 3 0 chr18 13061527 13061819 -72927115 - AluSx SINE Alu -19 293 1 201 347 168 25 chr18 13061995 13062191 -72926743 - MIR SINE MIR -10 252 29 541 265 20 7 chr18 13062321 13062472 -72926462 + MLT1J LTR MaLR 7 159 -352 2349 86 7 0 chr18 13062768 13063058 -72925876 - AluY SINE Alu -19 292 1 4247 162 53 52 chr18 13063203 13064054 -72924880 - MER21B LTR ERV1 -11 852 1 180 97 0 0 chr18 13064912 13064943 -72923991 + (TG)n Simple_repeat Simple_repeat 1 31 0 700 182 33 0 chr18 13065977 13066098 -72922836 + FLAM_C SINE Alu 1 125 -8 1464 215 10 0 chr18 13066114 13066402 -72922532 + AluJo SINE Alu 1 291 -21 642 167 0 0 chr18 13066475 13066571 -72922363 - FLAM_A SINE Alu -46 96 1 2355 95 0 0 chr18 13066933 13067229 -72921705 + AluSx SINE Alu 1 296 -16 376 292 43 4 chr18 13067857 13068020 -72920914 + MIR SINE MIR 9 175 -87 192 77 0 0 chr18 13068128 13068154 -72920780 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 211 231 0 19 chr18 13069666 13069718 -72919216 + MIR SINE MIR 14 64 -198 2168 111 10 0 chr18 13070357 13070655 -72918279 + AluSx SINE Alu 1 301 -11 762 154 0 17 chr18 13071020 13071137 -72917797 + FLAM_A SINE Alu 13 127 -15 1955 144 7 10 chr18 13071664 13071963 -72916971 + AluSx SINE Alu 1 298 -14 802 318 65 49 chr18 13072450 13072711 -72916223 + L1MC4a LINE L1 4807 5062 -1084 2268 83 0 3 chr18 13072711 13073001 -72915933 - AluY SINE Alu -16 295 7 802 318 65 49 chr18 13073001 13073414 -72915520 + L1MC4a LINE L1 5062 4996 -1150 1903 144 0 3 chr18 13073414 13073721 -72915213 + AluSx SINE Alu 1 306 0 802 318 65 49 chr18 13073721 13074118 -72914816 + L1MC4a LINE L1 4995 5384 -762 1104 113 48 27 chr18 13074292 13074478 -72914456 + L1MA9 LINE L1 6118 6307 -5 1822 171 7 3 chr18 13074637 13074942 -72913992 + AluJo SINE Alu 1 306 -6 774 250 58 13 chr18 13075268 13075492 -72913442 + L1ME3A LINE L1 5932 6165 -5 207 257 215 42 chr18 13075761 13075905 -72913029 - MIR3 SINE MIR -39 169 1 339 293 106 29 chr18 13076121 13076329 -72912605 + MIR SINE MIR 28 251 -11 24 53 0 0 chr18 13076550 13076588 -72912346 + AT_rich Low_complexity Low_complexity 1 38 0 388 277 85 8 chr18 13076778 13076908 -72912026 + MIR SINE MIR 74 213 -49 978 248 160 70 chr18 13076916 13077416 -72911518 + MLT1H1 LTR MaLR 4 548 -7 2472 22 0 0 chr18 13077953 13078228 -72910706 - AluYa5 SINE Alu -2 309 35 1782 162 59 78 chr18 13078284 13078722 -72910212 + MSTB1 LTR MaLR 1 430 -2 21 0 0 0 chr18 13078786 13078807 -72910127 + AT_rich Low_complexity Low_complexity 1 21 0 2240 103 0 0 chr18 13078904 13079196 -72909738 + AluSx SINE Alu 1 292 -20 801 262 121 37 chr18 13079827 13080580 -72908354 + L2 LINE L2 2477 3306 -7 2181 112 0 16 chr18 13080618 13080923 -72908011 - AluSx SINE Alu -12 300 1 300 200 47 127 chr18 13081514 13081664 -72907270 - L1ME4a LINE L1 -11 6110 5973 2134 110 7 3 chr18 13081989 13082279 -72906655 + AluSx SINE Alu 1 291 -21 892 202 171 17 chr18 13082913 13083200 -72905734 + L1MC4 LINE L1 7711 8041 -1 889 137 7 14 chr18 13083307 13083453 -72905481 - FRAM SINE Alu -11 165 21 21 0 0 0 chr18 13083489 13083510 -72905424 + AT_rich Low_complexity Low_complexity 1 21 0 187 283 0 0 chr18 13084967 13085020 -72903914 + L2 LINE L2 3220 3272 0 500 214 10 0 chr18 13085414 13085512 -72903422 + MER58 DNA MER1_type 175 273 -68 44 20 0 0 chr18 13086100 13086151 -72902783 + AT_rich Low_complexity Low_complexity 1 51 0 216 286 0 0 chr18 13086511 13086574 -72902360 - MIR SINE MIR -17 245 183 1851 148 7 7 chr18 13087094 13087385 -72901549 + AluJb SINE Alu 1 291 -21 1533 200 3 14 chr18 13087957 13088252 -72900682 - AluJo SINE Alu -20 292 1 202 412 79 0 chr18 13088759 13088873 -72900061 - MIR3 SINE MIR -51 157 35 270 0 0 0 chr18 13089231 13089261 -72899673 + (TG)n Simple_repeat Simple_repeat 2 31 0 2051 154 45 12 chr18 13089309 13089641 -72899293 - MER2 DNA MER2_type -1 343 1 508 241 91 48 chr18 13089876 13090063 -72898871 + L1M4b LINE L1 4 198 -6661 2601 44 0 3 chr18 13090065 13090363 -72898571 - AluY SINE Alu -14 297 1 328 305 176 5 chr18 13090475 13090662 -72898272 + L1M4b LINE L1 372 590 -6269 2002 257 91 31 chr18 13090675 13091794 -72897140 + L1M4b LINE L1 1156 2494 -4633 2962 238 49 5 chr18 13091802 13092617 -72896317 + L1M4b LINE L1 3839 4689 -2268 22 35 0 0 chr18 13092716 13092745 -72896189 + AT_rich Low_complexity Low_complexity 1 29 0 2162 117 0 10 chr18 13093074 13093374 -72895560 - AluSx SINE Alu -9 303 7 697 169 92 0 chr18 13093379 13093521 -72895413 - L1MA4 LINE L1 -187 6113 5959 910 179 0 0 chr18 13093521 13093672 -72895262 - MER5A DNA MER1_type -38 151 1 21 0 0 0 chr18 13094134 13094155 -72894779 + AT_rich Low_complexity Low_complexity 1 21 0 1244 164 14 5 chr18 13094314 13094521 -72894413 + AluJo SINE Alu 85 293 -19 2288 186 7 33 chr18 13094577 13094617 -72894317 - MLT2D LTR ERVL 0 414 374 1229 34 23 0 chr18 13094617 13094792 -72894142 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 2288 186 7 33 chr18 13094792 13095176 -72893758 - MLT2D LTR ERVL -40 374 1 1401 176 31 31 chr18 13095336 13095625 -72893309 + AluJo SINE Alu 1 289 -23 189 74 0 0 chr18 13095635 13095662 -72893272 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 267 273 23 11 chr18 13095792 13095880 -72893054 + L2 LINE L2 3225 3313 0 1295 199 13 46 chr18 13096036 13096338 -72892596 + AluSx SINE Alu 3 294 -18 254 368 11 0 chr18 13097681 13097776 -72891158 + MIR SINE MIR 161 256 -6 2272 84 7 0 chr18 13098064 13098351 -72890583 - AluSx SINE Alu -23 289 1 2473 61 0 0 chr18 13098656 13098951 -72889983 + AluY SINE Alu 1 295 -16 233 235 222 0 chr18 13100264 13100345 -72888589 - MIR SINE MIR -12 250 152 1796 170 6 6 chr18 13100460 13100772 -72888162 - AluSx SINE Alu 0 312 1 912 256 68 60 chr18 13100772 13101268 -72887666 - L1MC5 LINE L1 -202 7759 7260 266 271 0 68 chr18 13101384 13101502 -72887432 - L1MC5 LINE L1 -749 7212 7103 808 148 9 0 chr18 13101503 13101618 -72887316 + FLAM_C SINE Alu 2 117 -26 379 190 60 50 chr18 13101634 13101734 -72887200 - L1MC5 LINE L1 -832 7129 7029 1332 250 77 81 chr18 13102015 13102630 -72886304 - MER77 LTR ERV1 -6 599 55 2695 141 13 7 chr18 13103150 13103604 -72885330 + L1MB3 LINE L1 5705 6161 -22 694 147 156 0 chr18 13103945 13104054 -72884880 - FLAM_C SINE Alu -16 127 2 656 243 127 81 chr18 13104268 13104836 -72884098 + MLT1G1 LTR MaLR 1 594 -1 1269 171 58 71 chr18 13105165 13105314 -72883620 + MLT1A1 LTR MaLR 11 160 -205 234 0 0 0 chr18 13105314 13105340 -72883594 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1917 115 3 31 chr18 13105342 13105628 -72883306 - AluSx SINE Alu -32 280 3 1269 171 58 71 chr18 13105628 13105784 -72883150 + MLT1A1 LTR MaLR 161 315 -50 302 216 125 68 chr18 13105785 13105961 -72882973 - L1ME LINE L1 -407 5714 5529 441 278 199 45 chr18 13106206 13106588 -72882346 + LTR16A LTR ERVL 17 450 0 192 125 0 0 chr18 13106777 13106809 -72882125 + (T)n Simple_repeat Simple_repeat 1 32 0 348 24 0 0 chr18 13107341 13107382 -72881552 + (TTCC)n Simple_repeat Simple_repeat 2 42 0 1699 151 13 37 chr18 13107383 13107682 -72881252 - AluJb SINE Alu -20 292 1 432 218 158 0 chr18 13109747 13109880 -72879054 + MLT1J LTR MaLR 1 154 -357 590 154 19 10 chr18 13110021 13110125 -72878809 - Charlie4 DNA MER1_type 0 1961 1857 854 272 12 20 chr18 13110132 13110385 -72878549 + L1ME4a LINE L1 5449 5700 -466 202 169 24 36 chr18 13110438 13110521 -72878413 + (TATAA)n Simple_repeat Simple_repeat 5 86 0 967 139 0 0 chr18 13110600 13110729 -72878205 + FLAM_C SINE Alu 1 129 -4 2310 107 10 0 chr18 13111359 13111668 -72877266 - AluSx SINE Alu 0 312 1 2329 93 7 3 chr18 13111850 13112152 -72876782 - AluSx SINE Alu -9 303 1 527 222 88 4 chr18 13112213 13112452 -72876482 + L1ME4a LINE L1 5804 6119 -2 255 216 59 49 chr18 13112462 13112564 -72876370 + L1ME4a LINE L1 5822 5924 -197 1928 161 0 3 chr18 13112609 13112908 -72876026 - AluJb SINE Alu -14 298 1 685 165 8 0 chr18 13113085 13113206 -72875728 + MER53 DNA DNA 1 122 -67 24 77 0 0 chr18 13113509 13113561 -72875373 + AT_rich Low_complexity Low_complexity 1 52 0 422 121 84 12 chr18 13113572 13113655 -72875279 - L1MC2 LINE L1 0 6344 6256 225 182 68 0 chr18 13113655 13113699 -72875235 - MER8 DNA MER2_type -2 237 191 * 2440 132 12 39 chr18 13113690 13114030 -72874904 + Tigger2 DNA MER2_type 2320 2649 -69 2281 84 0 42 chr18 13114030 13114338 -72874596 + AluSx SINE Alu 1 295 -17 2440 132 12 39 chr18 13114338 13114407 -72874527 + Tigger2 DNA MER2_type 2649 2718 0 317 263 42 0 chr18 13114531 13114626 -72874308 + MLT1H LTR MaLR 77 175 -374 2395 84 0 3 chr18 13114748 13115046 -72873888 + AluSc SINE Alu 1 297 -12 25 0 0 0 chr18 13115061 13115086 -72873848 + AT_rich Low_complexity Low_complexity 1 25 0 1149 202 171 71 chr18 13115301 13115392 -72873542 + LTR40b LTR ERVL 1 82 -380 1442 129 4 82 chr18 13115392 13115448 -72873486 - MER46A DNA MER2_type -2495 236 177 1860 118 65 0 chr18 13115448 13115739 -72873195 - AluSx SINE Alu 0 310 3 1442 129 4 82 chr18 13115739 13115937 -72872997 - MER46A DNA MER2_type -2554 177 1 1149 202 171 71 chr18 13115937 13116265 -72872669 + LTR40b LTR ERVL 81 462 0 1913 134 17 20 chr18 13116711 13117010 -72871924 + AluSx SINE Alu 1 298 -14 447 296 84 36 chr18 13118107 13118381 -72870553 + HAL1 LINE L1 5 291 -2216 355 182 47 135 chr18 13118770 13118840 -72870094 + HAL1 LINE L1 1008 1083 -1424 1938 138 3 7 chr18 13118840 13119129 -72869805 + AluJo SINE Alu 1 288 -24 355 182 47 135 chr18 13119129 13119228 -72869706 + HAL1 LINE L1 1083 1162 -1345 296 254 227 0 chr18 13121448 13121558 -72867376 - MIR3 SINE MIR -43 165 31 1710 159 7 36 chr18 13121611 13121920 -72867014 - AluJo SINE Alu -12 300 1 13546 75 13 3 chr18 13122520 13124641 -72864293 + L1P3 LINE L1 3559 5698 -456 2495 61 0 0 chr18 13124947 13125242 -72863692 + AluY SINE Alu 1 295 -16 209 235 222 0 chr18 13126555 13126636 -72862298 - MIR SINE MIR -12 250 152 2382 98 3 0 chr18 13126745 13127051 -72861883 - AluSx SINE Alu -5 307 1 185 182 23 0 chr18 13127224 13127268 -72861666 + MIR3 SINE MIR 114 158 -50 28 0 0 0 chr18 13127943 13127971 -72860963 + AT_rich Low_complexity Low_complexity 1 28 0 1653 160 36 33 chr18 13128971 13129278 -72859656 + MER7A DNA MER2_type 41 346 0 1403 96 0 0 chr18 13129576 13129763 -72859171 - AluY SINE Alu -1 310 124 540 273 30 0 chr18 13129764 13129896 -72859038 - MER69 DNA AcHobo -1090 136 1 221 354 107 6 chr18 13130112 13130290 -72858644 + MIR SINE MIR 23 218 -44 2248 116 0 22 chr18 13130290 13130609 -72858325 + AluSx SINE Alu 1 312 0 590 230 142 59 chr18 13130849 13131099 -72857835 - L1ME4a LINE L1 -65 6056 5828 2114 104 3 21 chr18 13131099 13131427 -72857507 + AluSx SINE Alu 1 323 0 590 230 142 59 chr18 13131427 13131584 -72857350 - L1ME4a LINE L1 -293 5828 5556 2111 108 30 0 chr18 13131763 13132059 -72856875 - AluSx SINE Alu -7 305 1 535 231 62 110 chr18 13132373 13132681 -72856253 + MER102a DNA MER1_type 35 327 -3 1185 154 6 0 chr18 13133143 13133325 -72855609 - AluJb SINE Alu -9 303 121 312 284 173 41 chr18 13134169 13134440 -72854494 + L1ME4a LINE L1 5290 5596 -525 1797 155 0 10 chr18 13134498 13134789 -72854145 - AluJo SINE Alu -24 288 1 305 282 69 0 chr18 13134794 13134925 -72854009 + L1ME4a LINE L1 5633 5772 -2036 2047 131 3 7 chr18 13135005 13135303 -72853631 - AluSx SINE Alu -15 297 1 3724 142 66 121 chr18 13135922 13136229 -72852705 + MER21A LTR ERV1 15 337 -594 1954 134 48 0 chr18 13136229 13136520 -72852414 + AluSx SINE Alu 1 305 -7 3724 142 66 121 chr18 13136520 13137176 -72851758 + MER21A LTR ERV1 337 925 -6 6304 133 5 34 chr18 13138603 13139137 -72849797 + L1MA5 LINE L1 5256 5743 -557 2184 115 0 13 chr18 13139137 13139441 -72849493 + AluSx SINE Alu 6 305 -7 6304 133 5 34 chr18 13139441 13139983 -72848951 + L1MA5 LINE L1 5743 6300 0 378 229 97 7 chr18 13140022 13140166 -72848768 + L1ME4a LINE L1 5961 6117 -4 1303 197 3 58 chr18 13140691 13140986 -72847948 - AluJo SINE Alu -33 279 1 882 276 7 32 chr18 13141012 13141320 -72847614 - L1MC4 LINE L1 -365 7677 7378 1402 90 0 0 chr18 13141837 13142014 -72846920 - AluSg/x SINE Alu -3 309 133 182 36 0 36 chr18 13142014 13142042 -72846892 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 1893 135 3 40 chr18 13142054 13142351 -72846583 - AluSg SINE Alu -24 286 1 198 0 0 0 chr18 13142375 13142397 -72846537 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 557 251 54 108 chr18 13142771 13143272 -72845662 - MLT1K LTR MaLR 0 476 3 1711 139 0 15 chr18 13143548 13143814 -72845120 - AluJo SINE Alu -38 274 13 2495 68 0 0 chr18 13143829 13144123 -72844811 + AluY SINE Alu 1 294 -17 510 92 0 0 chr18 13144389 13144454 -72844480 - AluJo SINE Alu -22 290 226 1264 123 0 11 chr18 13144454 13144633 -72844301 - AluJo SINE Alu -125 187 11 6036 129 21 30 chr18 13144821 13144983 -72843951 + L1PB1 LINE L1 4465 4627 -1524 2340 120 0 0 chr18 13144983 13145292 -72843642 + AluSg SINE Alu 1 309 -1 6036 129 21 30 chr18 13145292 13146837 -72842097 + L1PB1 LINE L1 4627 6149 -2 32 26 0 0 chr18 13147348 13147387 -72841547 + AT_rich Low_complexity Low_complexity 1 39 0 715 261 23 18 chr18 13147850 13148068 -72840866 - MIR SINE MIR -25 237 19 232 316 31 0 chr18 13148084 13148182 -72840752 - HAL1b LINE L1 -42 1306 1206 1571 179 15 56 chr18 13149056 13149256 -72839678 - AluJo SINE Alu -1 311 127 2077 126 14 0 chr18 13149256 13149542 -72839392 + AluSg SINE Alu 1 290 -20 1571 179 15 56 chr18 13149542 13149665 -72839269 - AluJo SINE Alu -185 127 1 1118 129 12 0 chr18 13149944 13150107 -72838827 - FRAM SINE Alu -1 165 1 2980 188 71 24 chr18 13151251 13151733 -72837201 - L1MB8 LINE L1 -6 6172 5649 2143 108 10 3 chr18 13151733 13152029 -72836905 - AluSx SINE Alu -14 298 1 2980 188 71 24 chr18 13152029 13152204 -72836730 - L1MB8 LINE L1 -529 5649 5484 2343 219 15 6 chr18 13152195 13152715 -72836219 - L1MB8 LINE L1 -1059 5087 4563 * 1033 174 6 0 chr18 13152841 13153002 -72835932 + AluJo SINE Alu 1 162 -150 1437 141 0 30 chr18 13153673 13153907 -72835027 - AluJo SINE Alu -1 311 85 215 250 0 19 chr18 13154978 13155030 -72833904 + CT-rich Low_complexity Low_complexity 4 54 0 1678 220 94 44 chr18 13155330 13155434 -72833500 - MLT1D LTR MaLR -4 501 404 1869 130 7 39 chr18 13155434 13155741 -72833193 + AluJb SINE Alu 16 312 0 1678 220 94 44 chr18 13155741 13156113 -72832821 - MLT1D LTR MaLR -101 404 1 265 190 0 101 chr18 13156118 13156197 -72832737 + L2 LINE L2 3243 3313 0 375 221 29 103 chr18 13156278 13156341 -72832593 + MIR SINE MIR 24 73 -189 2404 60 0 10 chr18 13156341 13156640 -72832294 + AluY SINE Alu 1 296 -15 375 221 29 103 chr18 13156640 13156712 -72832222 + MIR SINE MIR 73 149 -113 227 289 99 47 chr18 13156791 13157155 -72831779 - L2 LINE L2 -239 3074 2687 454 211 9 99 chr18 13157161 13157374 -72831560 + L1MC5 LINE L1 7739 7932 -29 1718 181 0 14 chr18 13158140 13158427 -72830507 + AluJb SINE Alu 1 283 -29 200 231 0 0 chr18 13159488 13159527 -72829407 + (TG)n Simple_repeat Simple_repeat 1 39 0 557 194 90 28 chr18 13159837 13159981 -72828953 + MER103 DNA DNA 13 165 -1 771 295 74 7 chr18 13160059 13160357 -72828577 - L1ME4a LINE L1 -270 5851 5534 1645 156 71 47 chr18 13162366 13162706 -72826228 - MLT1A2 LTR MaLR -26 348 1 373 293 138 36 chr18 13162782 13163116 -72825818 - L1ME LINE L1 -469 5652 5285 2174 114 7 3 chr18 13163138 13163445 -72825489 - AluSx SINE Alu -4 308 1 2080 156 0 0 chr18 13164018 13164326 -72824608 + AluSq SINE Alu 1 308 -5 7905 224 134 10 chr18 13168658 13171736 -72817198 - L1MB4 LINE L1 -2 6178 2699 727 219 68 10 chr18 13171749 13171954 -72816980 - MER113 DNA MER1_type? -175 346 130 4537 221 35 25 chr18 13171968 13174060 -72814874 + L1MD2 LINE L1 4203 6359 0 702 202 0 0 chr18 13174661 13174922 -72814012 + (TG)n Simple_repeat Simple_repeat 1 261 0 237 299 96 28 chr18 13175909 13176086 -72812848 - MER5A DNA MER1_type 0 189 1 1559 140 61 4 chr18 13176260 13176538 -72812396 + L1PA16 LINE L1 5864 6157 -9 2097 126 3 0 chr18 13176543 13176850 -72812084 + AluSx SINE Alu 1 308 0 327 294 126 0 chr18 13178737 13178856 -72810078 - MER117 DNA MER1_type -60 137 4 1344 255 81 82 chr18 13179727 13180455 -72808479 - L1ME3A LINE L1 -220 5950 5223 198 0 0 0 chr18 13180455 13180477 -72808457 + (TTA)n Simple_repeat Simple_repeat 2 23 0 1542 154 47 43 chr18 13180480 13180759 -72808175 - AluJo SINE Alu -30 282 3 1911 170 9 6 chr18 13180759 13181076 -72807858 - 7SLRNA srpRNA srpRNA -2 318 1 1344 255 81 82 chr18 13181076 13181551 -72807383 - L1ME3A LINE L1 -947 5223 4733 1052 194 15 0 chr18 13181669 13181875 -72807059 - L1MC3 LINE L1 -792 6993 6785 303 54 0 0 chr18 13181877 13181914 -72807020 - MER83 LTR ERV1 -411 37 1 528 225 11 15 chr18 13184285 13184415 -72804519 + LTR40a LTR ERVL 343 515 -4 2241 117 0 0 chr18 13184565 13184864 -72804070 - AluSq SINE Alu -14 299 1 319 227 0 0 chr18 13185096 13185162 -72803772 - L1MC3 LINE L1 -1220 6565 6500 378 362 46 10 chr18 13185473 13185669 -72803265 - MIR SINE MIR -58 204 2 189 0 0 0 chr18 13186832 13186853 -72802081 + (TTTTTA)n Simple_repeat Simple_repeat 4 24 0 270 303 10 10 chr18 13187015 13187114 -72801820 - MER5A DNA MER1_type -6 183 85 393 323 85 35 chr18 13187763 13188165 -72800769 + L1M4 LINE L1 4981 5402 -744 227 254 15 15 chr18 13188506 13188573 -72800361 - MIR SINE MIR -10 252 186 180 302 0 0 chr18 13189434 13189487 -72799447 - L2 LINE L2 0 3313 3261 221 222 143 0 chr18 13190767 13190830 -72798104 + L2 LINE L2 3233 3304 -9 950 249 12 40 chr18 13191071 13191324 -72797610 - MER21B LTR ERV1 -124 739 494 1648 191 0 14 chr18 13191387 13191680 -72797254 - AluJo SINE Alu -23 289 1 1967 171 44 70 chr18 13191680 13191706 -72797228 - LTR54 LTR ERV1 -21 489 464 2587 63 0 0 chr18 13191706 13192008 -72796926 + AluY SINE Alu 1 302 -9 1967 171 44 70 chr18 13192008 13192483 -72796451 - LTR54 LTR ERV1 -46 464 1 327 279 74 38 chr18 13192513 13192786 -72796148 - MER21B LTR ERV1 -415 448 139 398 232 12 0 chr18 13192859 13192941 -72795993 - MER21B LTR ERV1 -768 95 13 2232 106 7 3 chr18 13193711 13194014 -72794920 + AluSx SINE Alu 1 304 -8 534 114 0 0 chr18 13195208 13195278 -72793656 - 5S rRNA rRNA -34 87 18 931 80 0 0 chr18 13195281 13195443 -72793491 - AluY SINE Alu 0 330 169 24 32 0 0 chr18 13196392 13196423 -72792511 + AT_rich Low_complexity Low_complexity 1 31 0 1892 158 14 3 chr18 13198025 13198322 -72790612 - AluJo SINE Alu -12 300 1 548 237 11 0 chr18 13198629 13198806 -72790128 + (TCTG)n Simple_repeat Simple_repeat 2 180 0 289 184 13 13 chr18 13198823 13198899 -72790035 + (TCTG)n Simple_repeat Simple_repeat 1 76 0 409 247 226 16 chr18 13200113 13200532 -72788402 - L2 LINE L2 -227 3086 2560 887 139 0 0 chr18 13200743 13200872 -72788062 - FLAM_C SINE Alu -3 130 2 1012 140 0 0 chr18 13201171 13201350 -72787584 + FRAM SINE Alu 4 182 0 626 244 96 22 chr18 13201818 13202047 -72786887 - MIR SINE MIR 0 262 17 318 293 31 24 chr18 13202067 13202231 -72786703 + L1MC2 LINE L1 5684 5794 -327 286 259 32 6 chr18 13202286 13202444 -72786490 + (TATAA)n Simple_repeat Simple_repeat 2 163 0 271 208 0 0 chr18 13202463 13202516 -72786418 + L1ME4a LINE L1 5975 6027 -94 995 210 116 82 chr18 13202546 13203036 -72785898 - L1MC5 LINE L1 -50 7911 7405 * 2232 193 56 12 chr18 13203035 13203733 -72785201 - L1ME1 LINE L1 -341 5825 5096 2606 163 34 36 chr18 13203767 13204324 -72784610 + L1MC2 LINE L1 5780 6335 -9 2310 86 3 0 chr18 13204410 13204714 -72784220 - L1PA8 LINE L1 0 6172 5868 770 0 11 0 chr18 13208089 13208179 -72780755 + (TAGA)n Simple_repeat Simple_repeat 4 94 0 1958 150 0 7 chr18 13208199 13208493 -72780441 + AluJo SINE Alu 6 297 -15 859 149 46 6 chr18 13208822 13208996 -72779938 - L1MB8 LINE L1 -6 6172 5992 233 73 36 36 chr18 13209494 13209549 -72779385 + (GGAA)n Simple_repeat Simple_repeat 1 55 0 21 0 0 0 chr18 13211551 13211572 -72777362 + AT_rich Low_complexity Low_complexity 1 21 0 299 344 113 0 chr18 13213078 13213264 -72775670 + L1ME LINE L1 5646 5852 -318 219 36 0 0 chr18 13213880 13213908 -72775026 + (CA)n Simple_repeat Simple_repeat 2 29 0 527 269 12 19 chr18 13214710 13214870 -72774064 + L1MC3 LINE L1 5476 5634 -487 2171 77 4 0 chr18 13214871 13215143 -72773791 - AluY SINE Alu 0 311 39 1248 163 142 28 chr18 13215210 13215498 -72773436 - MLT1F LTR MaLR -8 534 214 4353 70 5 0 chr18 13215898 13216453 -72772481 - THE1B-int LTR MaLR -1019 561 4 2157 148 19 38 chr18 13216456 13216827 -72772107 - THE1B LTR MaLR 0 364 1 194 125 25 25 chr18 13217611 13217651 -72771283 - L2 LINE L2 -6 3307 3268 457 297 72 31 chr18 13217783 13217993 -72770941 + MIR SINE MIR 3 219 -43 213 39 0 0 chr18 13218083 13218109 -72770825 + (TTTTC)n Simple_repeat Simple_repeat 3 28 0 5358 77 39 6 chr18 13218115 13218512 -72770422 - L1PA8 LINE L1 0 6172 5739 2424 78 0 7 chr18 13218512 13218820 -72770114 - AluY SINE Alu -5 306 1 5358 77 39 6 chr18 13218820 13219150 -72769784 - L1PA8 LINE L1 -433 5739 5421 419 288 34 0 chr18 13219216 13219334 -72769600 + MIR SINE MIR 32 153 -109 1072 221 71 3 chr18 13219348 13219642 -72769292 + MER46C DNA MER2_type 18 331 -7 739 198 23 17 chr18 13219851 13220023 -72768911 - MIR SINE MIR 0 262 90 210 217 181 0 chr18 13220171 13220254 -72768680 - MIR SINE MIR -62 200 103 512 107 0 24 chr18 13222461 13222545 -72766389 - L1MA5A LINE L1 0 6297 6216 569 164 0 3 chr18 13223541 13223665 -72765269 + LTR16C LTR ERVL 310 470 -21 1445 182 70 73 chr18 13223692 13223966 -72764968 + L1MC3 LINE L1 5802 6076 -1709 2239 99 13 13 chr18 13223966 13224278 -72764656 + AluSq SINE Alu 1 312 -1 1445 182 70 73 chr18 13224278 13224416 -72764518 + L1MC3 LINE L1 6076 6213 -1572 1366 158 0 14 chr18 13224423 13224644 -72764290 + AluJb SINE Alu 87 304 -8 2862 166 103 16 chr18 13224648 13224903 -72764031 - MER7C DNA MER2_type -2426 602 371 2343 95 3 0 chr18 13224903 13225198 -72763736 + AluSq SINE Alu 1 296 -17 2862 166 103 16 chr18 13225198 13225495 -72763439 - MER7C DNA MER2_type -2657 371 2 7333 176 30 49 chr18 13225496 13226293 -72762641 + L1MC3 LINE L1 6212 6966 -819 2382 71 0 0 chr18 13226293 13226595 -72762339 + AluY SINE Alu 1 302 0 7333 176 30 49 chr18 13226595 13227400 -72761534 + L1MC3 LINE L1 6966 7785 0 360 175 214 48 chr18 13228001 13228127 -72760807 + LTR45B LTR ERV1 343 489 0 26 64 0 0 chr18 13228541 13228588 -72760346 + AT_rich Low_complexity Low_complexity 1 47 0 603 307 82 4 chr18 13229040 13229320 -72759614 + L1ME LINE L1 5519 5820 -301 581 179 94 0 chr18 13229332 13229438 -72759496 + MER58A DNA MER1_type 1 116 0 1932 166 12 59 chr18 13229449 13229853 -72759081 - MLT1B LTR MaLR -5 385 1 449 202 91 0 chr18 13229880 13229979 -72758955 + MER58A DNA MER1_type 117 224 0 707 198 0 0 chr18 13230034 13230160 -72758774 - FLAM_A SINE Alu -7 135 10 2144 114 28 0 chr18 13230285 13230574 -72758360 - AluSx SINE Alu -15 297 1 2280 122 0 0 chr18 13230725 13231029 -72757905 + AluSx SINE Alu 1 304 -8 1660 139 3 80 chr18 13231559 13231712 -72757222 + AluJo SINE Alu 2 120 -192 2007 106 36 4 chr18 13231712 13232011 -72756923 + AluSx SINE Alu 1 308 0 1660 139 3 80 chr18 13232011 13232180 -72756754 + AluJo SINE Alu 120 300 -12 2261 108 0 0 chr18 13232382 13232677 -72756257 + AluSq SINE Alu 1 295 -18 1393 121 10 0 chr18 13234138 13234336 -72754598 - AluSg/x SINE Alu 0 312 113 2133 120 7 10 chr18 13234964 13235263 -72753671 + AluSx SINE Alu 1 298 -14 1794 179 14 0 chr18 13235412 13235708 -72753226 - AluJo SINE Alu -12 300 1 210 269 194 22 chr18 13236270 13236404 -72752530 + MIR SINE MIR 23 179 -83 225 0 0 0 chr18 13236998 13237023 -72751911 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 1675 183 24 37 chr18 13239582 13239959 -72748975 - L1MA10 LINE L1 -7 6327 5956 785 234 26 39 chr18 13239963 13240194 -72748740 + MER102b DNA MER1_type 65 292 -49 2394 95 0 10 chr18 13240234 13240540 -72748394 + AluSx SINE Alu 1 303 -9 1580 173 32 25 chr18 13241384 13241668 -72747266 - AluJo SINE Alu -26 286 1 2367 89 0 10 chr18 13242195 13242508 -72746426 + AluSq SINE Alu 1 310 -3 226 325 83 16 chr18 13242638 13243023 -72745911 + L1ME LINE L1 4240 4650 -1496 305 296 134 35 chr18 13243117 13243401 -72745533 + L1ME LINE L1 4752 5063 -1083 2493 84 0 0 chr18 13243417 13243727 -72745207 - AluY SINE Alu -1 310 1 1705 163 7 31 chr18 13243747 13244041 -72744893 - AluJo SINE Alu -25 287 1 2249 93 10 3 chr18 13244132 13244423 -72744511 - AluSx SINE Alu -19 293 1 24 0 0 0 chr18 13244433 13244457 -72744477 + AT_rich Low_complexity Low_complexity 1 24 0 1889 109 33 43 chr18 13244640 13244943 -72743991 + AluSx SINE Alu 1 300 -12 226 303 26 13 chr18 13244996 13245072 -72743862 + L1ME LINE L1 5494 5570 -551 701 209 8 0 chr18 13245124 13245257 -72743677 - MLT1B LTR MaLR 0 390 257 536 208 28 0 chr18 13245257 13245363 -72743571 - LTR62 LTR ERVK -1 718 610 1214 189 91 4 chr18 13245377 13245671 -72743263 + AluJo SINE Alu 19 333 0 379 139 12 0 chr18 13245738 13245800 -72743134 + MLT1C LTR MaLR 2 68 -306 2239 118 0 0 chr18 13246359 13246656 -72742278 + AluSx SINE Alu 1 297 -15 2573 56 3 0 chr18 13246781 13247085 -72741849 - AluY SINE Alu -6 305 1 440 261 97 23 chr18 13247473 13247649 -72741285 - MLT1K LTR MaLR -24 564 376 515 291 86 6 chr18 13247688 13247863 -72741071 - MLT1K LTR MaLR -303 285 97 2127 106 3 53 chr18 13248289 13248610 -72740324 + AluSg SINE Alu 1 305 -5 1714 183 7 7 chr18 13249845 13250135 -72738799 - AluJo SINE Alu -17 295 6 1943 156 7 0 chr18 13250143 13250432 -72738502 - AluJb SINE Alu -21 291 1 853 148 18 47 chr18 13251953 13252122 -72736812 + FRAM SINE Alu 1 164 -2 2192 119 10 7 chr18 13252318 13252628 -72736306 - AluSq SINE Alu -2 311 1 2177 92 11 0 chr18 13252689 13252970 -72735964 + AluSq SINE Alu 1 284 -29 940 128 54 0 chr18 13252977 13253157 -72735777 + AluSg/x SINE Alu 125 312 0 1472 219 150 22 chr18 13253236 13253684 -72735250 + MLT1D LTR MaLR 1 505 0 197 65 32 0 chr18 13253805 13253836 -72735098 + (TTC)n Simple_repeat Simple_repeat 2 33 0 24 0 0 0 chr18 13253850 13253874 -72735060 + AT_rich Low_complexity Low_complexity 1 24 0 5174 80 50 4 chr18 13253889 13254592 -72734342 + L1PA8 LINE L1 5438 6172 0 704 133 0 0 chr18 13254608 13254713 -72734221 - L1M1 LINE L1 -747 5555 5451 2075 127 10 13 chr18 13254732 13255046 -72733888 - AluSq SINE Alu 0 313 1 1710 168 42 6 chr18 13255052 13255385 -72733549 - L1MA7 LINE L1 -2 6289 5945 1274 293 77 18 chr18 13255385 13256501 -72732433 + HERV16 LTR ERVL 1728 2975 -2021 549 237 38 0 chr18 13256783 13256914 -72732020 + L1MC4a LINE L1 5568 5703 -2105 307 310 41 70 chr18 13256955 13257126 -72731808 - HERV16 LTR ERVL -1591 3405 3240 537 203 72 108 chr18 13257126 13257348 -72731586 + L1MC4a LINE L1 5706 5919 -1889 1205 155 15 10 chr18 13257369 13257575 -72731359 + AluJb SINE Alu 86 292 -20 1573 207 89 45 chr18 13257585 13258102 -72730832 + L1MC4a LINE L1 5941 6480 -1328 1456 114 0 35 chr18 13258105 13258332 -72730602 - Tigger2a DNA MER2_type -215 219 1 379 275 0 28 chr18 13258358 13258467 -72730467 - L2 LINE L2 -13 3300 3195 786 322 91 58 chr18 13259400 13260564 -72728370 + L2 LINE L2 2044 3240 -32 651 253 79 0 chr18 13260605 13260795 -72728139 - MIR SINE MIR -37 225 21 739 130 0 0 chr18 13262270 13262370 -72726564 - LTR12 LTR ERV1 0 714 615 534 99 0 0 chr18 13262381 13262452 -72726482 + Alu SINE Alu 2 72 -239 2321 79 0 3 chr18 13262453 13262743 -72726191 + AluY SINE Alu 22 310 -1 295 260 0 0 chr18 13262773 13262846 -72726088 - LTR30 LTR ERV1 -98 624 552 1484 91 109 73 chr18 13262847 13263121 -72725813 - LTR12 LTR ERV1 -430 284 1 24 0 0 0 chr18 13264664 13264688 -72724246 + GC_rich Low_complexity Low_complexity 1 24 0 31 68 0 0 chr18 13265005 13265064 -72723870 + GC_rich Low_complexity Low_complexity 1 59 0 1919 103 85 11 chr18 13267747 13268029 -72720905 - AluSx SINE Alu -9 303 1 1441 178 66 18 chr18 13269345 13269631 -72719303 - AluJo SINE Alu -12 300 1 222 388 114 20 chr18 13269810 13270065 -72718869 - L2 LINE L2 -25 3247 2969 257 248 173 85 chr18 13270160 13270542 -72718392 - L2 LINE L2 -504 2810 2384 2190 107 16 7 chr18 13270737 13271046 -72717888 - AluSx SINE Alu 0 312 1 193 284 25 25 chr18 13271775 13271856 -72717078 + MIR3 SINE MIR 125 205 -3 466 182 0 45 chr18 13271954 13272064 -72716870 - L1MA9 LINE L1 -38 6274 6170 33 25 0 0 chr18 13272340 13272380 -72716554 + AT_rich Low_complexity Low_complexity 1 40 0 1544 148 68 29 chr18 13272440 13272718 -72716216 - AluJo SINE Alu -23 289 1 346 229 25 57 chr18 13272729 13272886 -72716048 - L1MC5 LINE L1 -186 7775 7624 21 0 0 0 chr18 13273319 13273340 -72715594 + AT_rich Low_complexity Low_complexity 1 21 0 213 189 19 19 chr18 13273948 13274001 -72714933 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 646 24 71 0 chr18 13274367 13274451 -72714483 + 5S rRNA rRNA 1 90 -31 336 234 70 62 chr18 13275165 13275293 -72713641 - MIR3 SINE MIR -9 199 71 481 192 96 0 chr18 13275966 13276070 -72712864 - L2 LINE L2 -4 3309 3196 406 246 164 68 chr18 13276391 13276611 -72712323 + MIR SINE MIR 19 259 -3 1634 260 78 18 chr18 13276884 13277372 -72711562 - LTR40a LTR ERVL 0 519 3 229 248 129 0 chr18 13277670 13277771 -72711163 + L1MC4 LINE L1 7928 8041 -1 369 297 47 14 chr18 13278778 13278926 -72710008 - L1ME3A LINE L1 -56 6114 5962 873 167 110 20 chr18 13279016 13279261 -72709673 - MER20B DNA MER1_type 0 783 517 526 270 47 26 chr18 13279415 13279749 -72709185 - MER20B DNA MER1_type -249 534 109 26 98 0 0 chr18 13280587 13280669 -72708265 + AT_rich Low_complexity Low_complexity 1 82 0 21 36 0 0 chr18 13281272 13281300 -72707634 + AT_rich Low_complexity Low_complexity 1 28 0 191 35 0 35 chr18 13281772 13281801 -72707133 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 263 285 69 23 chr18 13282011 13282141 -72706793 - L1ME4a LINE L1 -4 6117 5982 1916 91 87 4 chr18 13283275 13283551 -72705383 + AluSg1 SINE Alu 1 299 -10 2012 149 0 0 chr18 13283991 13284286 -72704648 - AluSx SINE Alu -17 295 1 2450 49 0 3 chr18 13285275 13285562 -72703372 + AluY SINE Alu 15 300 -11 28 61 0 0 chr18 13285688 13285737 -72703197 + AT_rich Low_complexity Low_complexity 1 49 0 1720 165 0 26 chr18 13285738 13286041 -72702893 + AluJb SINE Alu 1 295 -17 255 250 0 0 chr18 13286452 13286512 -72702422 - L1MC5 LINE L1 -187 7774 7715 1165 150 128 40 chr18 13286877 13286996 -72701938 + AluJo SINE Alu 1 108 -194 233 29 29 0 chr18 13286996 13287030 -72701904 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1165 150 128 40 chr18 13287030 13287184 -72701750 + AluJo SINE Alu 108 298 -4 21 0 0 0 chr18 13287667 13287688 -72701246 + AT_rich Low_complexity Low_complexity 1 21 0 784 258 42 79 chr18 13289255 13289616 -72699318 - L1MC5 LINE L1 -63 7898 7564 2115 91 59 0 chr18 13289616 13289903 -72699031 - AluSx SINE Alu -8 304 1 784 258 42 79 chr18 13289903 13290111 -72698823 - L1MC5 LINE L1 -397 7564 7350 905 195 37 56 chr18 13290127 13290342 -72698592 + MER20 DNA MER1_type 2 212 -7 679 216 138 122 chr18 13290350 13290851 -72698083 - L1MC5 LINE L1 -756 7205 6697 305 248 136 16 chr18 13291447 13291572 -72697362 - MER103 DNA DNA -1 165 26 502 165 0 0 chr18 13292633 13292724 -72696210 - L1MA9 LINE L1 -67 6245 6155 2662 135 34 0 chr18 13292972 13293386 -72695548 - MSTA LTR MaLR 0 428 1 2394 53 40 3 chr18 13294297 13294597 -72694337 - AluY SINE Alu 0 311 1 2247 85 7 16 chr18 13295799 13296104 -72692830 - AluSx SINE Alu -2 310 9 5163 152 145 10 chr18 13296619 13296812 -72692122 - Tigger3b DNA MER2_type -1797 1231 1065 1409 123 18 13 chr18 13296812 13297039 -72691895 - MER30 DNA MER1_type -2 228 1 5163 152 145 10 chr18 13297039 13297930 -72691004 - Tigger3b DNA MER2_type -1963 1065 1 205 190 17 35 chr18 13298338 13298396 -72690538 + (TA)n Simple_repeat Simple_repeat 2 58 0 1463 194 34 14 chr18 13299020 13299313 -72689621 - AluJo SINE Alu -13 299 1 1091 191 86 4 chr18 13301325 13301603 -72687331 + MER33 DNA MER1_type 2 302 -22 2279 87 13 0 chr18 13302734 13303034 -72685900 + AluSq SINE Alu 1 304 -9 404 288 157 7 chr18 13303155 13303308 -72685626 + MER5B DNA MER1_type 3 178 0 2497 184 94 11 chr18 13303463 13304078 -72684856 + LTR65 LTR ERV1 3 668 -1 670 225 93 16 chr18 13304213 13304434 -72684500 - L1MA10 LINE L1 -3 6331 5945 502 304 0 12 chr18 13306550 13306711 -72682223 - MIR3 SINE MIR -29 179 21 2056 120 24 0 chr18 13307480 13307771 -72681163 - AluSg SINE Alu -12 298 1 430 245 21 63 chr18 13308916 13309059 -72679875 - MER5B DNA MER1_type -1 177 41 278 310 155 19 chr18 13309463 13309618 -72679316 - MIR SINE MIR -54 208 33 234 0 0 0 chr18 13310170 13310196 -72678738 + (A)n Simple_repeat Simple_repeat 1 26 0 226 283 85 38 chr18 13311551 13311657 -72677277 + L1PA13 LINE L1 1194 1304 -5483 270 0 0 0 chr18 13311946 13311976 -72676958 + (TG)n Simple_repeat Simple_repeat 2 31 0 457 241 184 23 chr18 13311997 13312171 -72676763 + MER102b DNA MER1_type 140 341 0 2317 75 0 0 chr18 13312473 13312767 -72676167 - AluY SINE Alu -17 294 1 638 251 111 8 chr18 13313230 13313465 -72675469 + MIR SINE MIR 3 261 -1 272 365 22 44 chr18 13313634 13313771 -72675163 + MIR SINE MIR 1 134 -74 25 0 0 0 chr18 13313895 13313920 -72675014 + AT_rich Low_complexity Low_complexity 1 25 0 250 235 104 9 chr18 13314050 13314165 -72674769 - L1ME4a LINE L1 -1 6120 5995 30 69 0 0 chr18 13314195 13314253 -72674681 + AT_rich Low_complexity Low_complexity 1 58 0 224 226 0 57 chr18 13314409 13314533 -72674401 + (CATATA)n Simple_repeat Simple_repeat 5 121 0 464 162 152 0 chr18 13314584 13314683 -72674251 + FRAM SINE Alu 33 146 -30 1262 229 92 29 chr18 13314706 13315151 -72673783 - L1MC4 LINE L1 -188 7854 7382 567 264 107 42 chr18 13315204 13315420 -72673514 + MIR SINE MIR 33 262 0 3196 153 78 50 chr18 13316562 13316962 -72671972 + MER44D DNA MER2_type 9 437 -2150 1640 203 31 0 chr18 13316962 13317317 -72671617 + MER47A DNA MER2_type 1 366 0 3196 153 78 50 chr18 13317317 13317594 -72671340 + MER44D DNA MER2_type 437 705 0 1364 211 178 2 chr18 13317594 13318016 -72670918 - MLT1D LTR MaLR -5 500 5 633 302 112 28 chr18 13318548 13319521 -72669413 + L2 LINE L2 2248 3304 -9 232 280 13 40 chr18 13319544 13319619 -72669315 - MER112 DNA MER1_type -183 77 5 189 0 0 0 chr18 13322743 13322764 -72666170 + (CAGG)n Simple_repeat Simple_repeat 1 21 0 2093 185 51 57 chr18 13323147 13323655 -72665279 + MLT1D LTR MaLR 1 505 0 314 270 71 56 chr18 13325375 13325571 -72663363 + MLT1J LTR MaLR 11 209 -302 757 298 75 38 chr18 13326147 13326989 -72661945 - L1MEc LINE L1 -4734 1662 790 39162 84 4 9 chr18 13327034 13332464 -72656470 - L1PA6 LINE L1 -1 6153 761 3534 118 12 4 chr18 13332464 13332971 -72655963 + MER9 LTR ERVK 1 511 0 39162 84 4 9 chr18 13332971 13333718 -72655216 - L1PA6 LINE L1 -5393 761 11 653 224 13 13 chr18 13333862 13334014 -72654920 - MER5B DNA MER1_type -19 159 8 460 270 94 79 chr18 13334342 13334723 -72654211 + MLT1I LTR MaLR 3 389 -20 1032 205 60 19 chr18 13334731 13334946 -72653988 - MER58A DNA MER1_type 0 224 1 286 300 110 19 chr18 13334997 13335141 -72653793 + L1M4 LINE L1 4039 4168 -1978 2128 123 0 7 chr18 13335141 13335441 -72653493 + AluSg1 SINE Alu 1 298 -11 286 300 110 19 chr18 13335441 13335559 -72653375 + L1M4 LINE L1 4168 4325 -1821 249 270 27 14 chr18 13337262 13337336 -72651598 + MIR SINE MIR 81 155 -107 278 231 59 6 chr18 13337384 13337553 -72651381 + (TA)n Simple_repeat Simple_repeat 2 179 0 258 229 0 105 chr18 13339509 13339614 -72649320 - AluSc SINE Alu -8 291 198 29 0 0 0 chr18 13339622 13339651 -72649283 + AT_rich Low_complexity Low_complexity 1 29 0 1967 156 3 0 chr18 13339651 13339946 -72648988 - AluJo SINE Alu -16 296 1 765 208 0 18 chr18 13340367 13340535 -72648399 - MIR SINE MIR -6 256 92 185 305 196 38 chr18 13341702 13342808 -72646126 + L2 LINE L2 1570 2850 -464 335 334 68 22 chr18 13344576 13344887 -72644047 + L3 LINE CR1 816 1140 -437 210 264 0 19 chr18 13346461 13346514 -72642420 + (CATG)n Simple_repeat Simple_repeat 1 52 0 360 231 0 0 chr18 13347342 13347446 -72641488 + (CA)n Simple_repeat Simple_repeat 1 104 0 1268 217 43 7 chr18 13347720 13347996 -72640938 + L1M3e LINE L1 1 286 -6744 2978 227 37 27 chr18 13347997 13349522 -72639412 + L1M3e LINE L1 1377 2932 -4175 2355 69 3 3 chr18 13349653 13349943 -72638991 - AluY SINE Alu 0 311 22 534 99 0 0 chr18 13349944 13350015 -72638919 - Alu SINE Alu -238 72 2 739 130 0 0 chr18 13350026 13350126 -72638808 + LTR12 LTR ERV1 615 714 0 638 258 79 0 chr18 13351602 13351792 -72637142 + MIR SINE MIR 21 225 -37 761 322 92 58 chr18 13351833 13352996 -72635938 - L2 LINE L2 -32 3240 2044 379 275 0 28 chr18 13353929 13354038 -72634896 + L2 LINE L2 3195 3300 -13 1456 114 0 35 chr18 13354064 13354291 -72634643 + Tigger2a DNA MER2_type 1 219 -215 1573 207 89 45 chr18 13354294 13354811 -72634123 - L1MC4a LINE L1 -1328 6480 5941 1205 155 15 10 chr18 13354821 13355027 -72633907 - AluJb SINE Alu -20 292 86 537 203 72 108 chr18 13355048 13355270 -72633664 - L1MC4a LINE L1 -1889 5919 5706 307 310 41 70 chr18 13355270 13355441 -72633493 + HERV16 LTR ERVL 3240 3405 -1591 532 244 38 0 chr18 13355482 13355613 -72633321 - L1MC4a LINE L1 -2105 5703 5568 1267 286 41 7 chr18 13355895 13356389 -72632545 - HERV16 LTR ERVL -2021 2975 2423 1274 271 115 40 chr18 13356429 13357011 -72631923 - HERV16 LTR ERVL -2717 2279 1728 1710 168 42 6 chr18 13357011 13357344 -72631590 + L1MA7 LINE L1 5945 6289 -2 2095 124 10 13 chr18 13357350 13357664 -72631270 + AluSq SINE Alu 1 313 0 704 133 0 0 chr18 13357683 13357788 -72631146 + L1M1 LINE L1 5451 5555 -747 5160 80 50 4 chr18 13357797 13358498 -72630436 - L1PA8 LINE L1 -2 6170 5438 24 0 0 0 chr18 13358513 13358537 -72630397 + AT_rich Low_complexity Low_complexity 1 24 0 197 65 32 0 chr18 13358551 13358582 -72630352 + (GAA)n Simple_repeat Simple_repeat 2 33 0 1390 212 154 27 chr18 13358703 13359151 -72629783 - MLT1D LTR MaLR 0 505 1 939 128 54 0 chr18 13359230 13359410 -72629524 - AluSg/x SINE Alu 0 312 125 2177 92 11 0 chr18 13359417 13359698 -72629236 - AluSq SINE Alu -29 284 1 2192 119 10 7 chr18 13359759 13360069 -72628865 + AluSq SINE Alu 1 311 -2 853 148 18 47 chr18 13360265 13360434 -72628500 - FRAM SINE Alu -2 164 1 1960 152 7 0 chr18 13361955 13362244 -72626690 + AluJb SINE Alu 1 291 -21 1618 196 7 7 chr18 13362252 13362543 -72626391 + AluJo SINE Alu 6 296 -16 2112 106 3 53 chr18 13363801 13364122 -72624812 - AluSg SINE Alu -5 305 1 515 291 86 6 chr18 13364548 13364723 -72624211 + MLT1K LTR MaLR 97 285 -303 440 261 97 23 chr18 13364762 13364938 -72623996 + MLT1K LTR MaLR 376 564 -24 2537 57 3 0 chr18 13365325 13365625 -72623309 + AluY SINE Alu 1 301 -10 28 61 0 0 chr18 13365751 13365800 -72623134 + AT_rich Low_complexity Low_complexity 1 49 0 1741 165 0 26 chr18 13365801 13366104 -72622830 + AluJb SINE Alu 1 295 -17 258 250 0 0 chr18 13366515 13366575 -72622359 - L1MC5 LINE L1 -187 7774 7715 1228 163 117 32 chr18 13366940 13367059 -72621875 + AluJo SINE Alu 1 108 -204 233 29 29 0 chr18 13367059 13367093 -72621841 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1228 163 117 32 chr18 13367093 13367255 -72621679 + AluJo SINE Alu 108 306 -6 180 0 0 0 chr18 13367737 13367757 -72621177 + (T)n Simple_repeat Simple_repeat 1 20 0 458 263 76 68 chr18 13369302 13369683 -72619251 - L1MC5 LINE L1 -32 7929 7546 6594 193 40 3 chr18 13369812 13370860 -72618074 - L1 LINE L1 -1862 5244 4129 1866 147 21 7 chr18 13370860 13371145 -72617789 + AluJb SINE Alu 1 289 -23 6594 193 40 3 chr18 13371145 13371500 -72617434 - L1 LINE L1 -2977 4129 3789 2275 58 4 4 chr18 13371502 13371779 -72617155 + THE1A LTR MaLR 1 277 -78 2954 241 44 32 chr18 13371798 13372598 -72616336 - L1 LINE L1 -3316 3790 3001 307 42 104 0 chr18 13372598 13372646 -72616288 - L1MA6 LINE L1 -4 6296 6244 2954 241 44 32 chr18 13372646 13374539 -72614395 - L1 LINE L1 -4105 3001 1377 1283 214 43 7 chr18 13374540 13374816 -72614118 - L1 LINE L1 -6744 286 1 336 234 0 0 chr18 13375098 13375192 -72613742 + (TG)n Simple_repeat Simple_repeat 1 94 0 226 245 0 19 chr18 13376009 13376062 -72612872 + (CATG)n Simple_repeat Simple_repeat 1 52 0 333 334 68 22 chr18 13377636 13377947 -72610987 - L3 LINE CR1 -437 1140 816 180 300 198 40 chr18 13379715 13380821 -72608113 - L2 LINE L2 -464 2850 1570 765 208 0 18 chr18 13381989 13382157 -72606777 + MIR SINE MIR 92 256 -6 1952 159 3 0 chr18 13382578 13382873 -72606061 + AluJo SINE Alu 1 296 -16 29 0 0 0 chr18 13382873 13382902 -72606032 + AT_rich Low_complexity Low_complexity 1 29 0 258 229 0 105 chr18 13382910 13383015 -72605919 + AluSc SINE Alu 198 291 -8 278 231 59 6 chr18 13384971 13385140 -72603794 + (TA)n Simple_repeat Simple_repeat 2 179 0 249 270 27 14 chr18 13385188 13385262 -72603672 - MIR SINE MIR -107 155 81 2136 98 7 17 chr18 13387082 13387378 -72601556 - AluSx SINE Alu -11 301 9 5313 153 143 10 chr18 13387893 13388086 -72600848 - Tigger3b DNA MER2_type -1797 1231 1065 1462 127 13 13 chr18 13388086 13388314 -72600620 - MER30 DNA MER1_type -2 228 1 5313 153 143 10 chr18 13388314 13389207 -72599727 - Tigger3b DNA MER2_type -1963 1065 1 205 190 17 35 chr18 13389615 13389673 -72599261 + (TA)n Simple_repeat Simple_repeat 1 57 0 1479 194 34 14 chr18 13390297 13390590 -72598344 - AluJo SINE Alu -13 299 1 1066 199 90 4 chr18 13392602 13392879 -72596055 + MER33 DNA MER1_type 2 302 -22 598 67 22 11 chr18 13394008 13394098 -72594836 + AluS SINE Alu 2 92 -221 368 269 141 70 chr18 13444532 13444759 -72544175 + MER112 DNA MER1_type 18 260 0 271 261 0 14 chr18 13445726 13445795 -72543139 + L2 LINE L2 3203 3270 -2 346 302 14 29 chr18 13445892 13446031 -72542903 - MIR SINE MIR -107 155 19 365 295 50 22 chr18 13446871 13447010 -72541924 - MER5A DNA MER1_type -1 188 46 259 366 38 16 chr18 13447538 13447721 -72541213 + MIR SINE MIR 20 206 -56 452 252 116 36 chr18 13448799 13449020 -72539914 + MIR SINE MIR 12 256 -6 200 292 26 84 chr18 13449375 13449529 -72539405 - MIR SINE MIR -50 212 68 283 287 28 28 chr18 13449944 13450052 -72538882 - MIR3 SINE MIR -34 174 67 1799 160 17 20 chr18 13451271 13451571 -72537363 + AluJo SINE Alu 1 299 -13 180 225 0 0 chr18 13451722 13451762 -72537172 + MER5B DNA MER1_type 1 40 -138 3793 236 48 15 chr18 13451885 13452828 -72536106 - MER57-int LTR ERV1 -740 6797 5824 1134 191 0 59 chr18 13453130 13453386 -72535548 - MER57-int LTR ERV1 -1709 5828 5588 312 288 127 45 chr18 13453493 13454163 -72534771 - L1M4 LINE L1 -2937 3209 2485 2330 108 0 0 chr18 13454268 13454573 -72534361 - AluSx SINE Alu -7 305 1 1362 273 104 48 chr18 13454585 13455207 -72533727 + MER21B LTR ERV1 98 754 -109 22 0 0 0 chr18 13455224 13455246 -72533688 + AT_rich Low_complexity Low_complexity 1 22 0 1317 189 33 56 chr18 13455333 13455639 -72533295 - MLT1A1 LTR MaLR 0 365 67 424 234 44 51 chr18 13456777 13456935 -72531999 - MLT1J2 LTR MaLR -3 447 291 361 227 38 91 chr18 13458268 13458400 -72530534 - LTR67 LTR ERVL -1 556 432 223 333 98 20 chr18 13458666 13458768 -72530166 - MIR SINE MIR -61 147 38 952 136 0 32 chr18 13460447 13460602 -72528332 + FRAM SINE Alu 3 152 -14 1994 154 0 3 chr18 13461784 13462082 -72526852 + AluJb SINE Alu 5 301 -11 2293 101 0 7 chr18 13462972 13463268 -72525666 - AluSx SINE Alu -18 294 1 375 274 26 0 chr18 13465201 13465314 -72523620 - MIR SINE MIR -86 176 61 2589 60 0 0 chr18 13465798 13466098 -72522836 + AluY SINE Alu 1 300 -11 680 218 168 0 chr18 13466200 13466379 -72522555 + MER3 DNA MER1_type 1 209 0 22 35 0 0 chr18 13466461 13466490 -72522444 + AT_rich Low_complexity Low_complexity 1 29 0 268 289 79 44 chr18 13466533 13466647 -72522287 - L2 LINE L2 0 3272 3155 2316 119 8 3 chr18 13466818 13467172 -72521762 + L1MA5A LINE L1 5938 6293 -4 728 181 27 32 chr18 13467207 13467436 -72521498 - MLT1L LTR MaLR -340 275 16 243 294 71 56 chr18 13467596 13467722 -72521212 + L2 LINE L2 3141 3268 -4 217 137 59 0 chr18 13468769 13468820 -72520114 + (CCTA)n Simple_repeat Simple_repeat 1 54 0 346 309 32 1 chr18 13468946 13469077 -72519857 + MIR SINE MIR 34 166 -63 340 260 11 11 chr18 13470026 13470131 -72518803 - MIR SINE MIR -64 144 52 1477 234 55 25 chr18 13470153 13470550 -72518384 + LTR40c LTR ERVL 56 464 -1 228 67 0 0 chr18 13470659 13470689 -72518245 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 1654 120 16 4 chr18 13471570 13471828 -72517106 + L1MB2 LINE L1 5911 6171 0 195 42 0 0 chr18 13472002 13472026 -72516908 + (TA)n Simple_repeat Simple_repeat 2 25 0 2198 131 0 3 chr18 13472046 13472352 -72516582 - AluSx SINE Alu -7 305 1 2624 161 25 43 chr18 13472480 13473034 -72515900 + L1MB3 LINE L1 5635 6178 -5 260 309 80 14 chr18 13474215 13474334 -72514600 - MIR SINE MIR -16 192 59 321 305 19 0 chr18 13477079 13477184 -72511750 + MIR SINE MIR 8 114 -148 353 233 14 0 chr18 13477187 13477260 -72511674 - MER45 DNA AcHobo 0 1581 1508 221 287 59 20 chr18 13477428 13477529 -72511405 + MIR SINE MIR 18 122 -86 221 306 82 61 chr18 13477677 13477824 -72511110 - MIR SINE MIR -11 251 102 192 238 107 60 chr18 13477915 13477926 -72511008 - MIR SINE MIR -92 116 102 625 196 190 0 chr18 13477926 13478084 -72510850 - MER5A DNA MER1_type -1 188 1 253 291 35 64 chr18 13478131 13478272 -72510662 - MER5B DNA MER1_type -33 145 9 490 191 20 95 chr18 13478877 13478980 -72509954 - MER53 DNA DNA -25 164 74 2302 82 3 7 chr18 13478980 13479272 -72509662 + AluSq SINE Alu 3 293 -20 490 191 20 95 chr18 13479272 13479315 -72509619 - MER53 DNA DNA -115 74 29 23 54 0 0 chr18 13481373 13481410 -72507524 + AT_rich Low_complexity Low_complexity 1 37 0 2162 123 6 19 chr18 13481417 13481733 -72507201 + AluSx SINE Alu 1 312 0 429 303 43 40 chr18 13481852 13482129 -72506805 - L1ME4a LINE L1 -18 6103 5826 1928 147 20 3 chr18 13483887 13484180 -72504754 - AluJo SINE Alu -13 299 2 328 250 48 36 chr18 13484925 13485009 -72503925 + L2 LINE L2 3188 3272 0 310 284 62 99 chr18 13485695 13485906 -72503028 - L2 LINE L2 -51 3221 3019 2427 97 0 3 chr18 13486578 13486878 -72502056 + AluSq SINE Alu 1 299 -14 233 250 48 36 chr18 13487095 13487179 -72501755 + MIR SINE MIR 119 203 -59 330 164 0 0 chr18 13487223 13487236 -72501698 + MER3 DNA MER1_type 36 48 -161 479 51 0 76 chr18 13487236 13487315 -72501619 - MER3 DNA MER1_type -1 208 136 4236 210 32 55 chr18 13487321 13488379 -72500555 + L1M4 LINE L1 2 1035 -5507 1767 234 51 7 chr18 13488385 13488799 -72500135 + MER70B LTR ERVL 4 435 -143 2999 234 43 42 chr18 13488809 13489453 -72499481 + L1M4 LINE L1 1023 1670 -4976 1777 167 0 0 chr18 13489453 13489728 -72499206 + AluJb SINE Alu 1 275 -37 2999 234 43 42 chr18 13489728 13490226 -72498708 + L1M4 LINE L1 1670 2166 -4480 847 101 57 13 chr18 13490341 13490500 -72498434 - L1MA8 LINE L1 -2 6289 6124 598 304 61 23 chr18 13490500 13490928 -72498006 - L1ME4a LINE L1 -513 5651 5293 409 255 166 25 chr18 13491105 13491340 -72497594 - MLT1E2 LTR MaLR -334 292 25 204 156 22 0 chr18 13491719 13491764 -72497170 + T-rich Low_complexity Low_complexity 2 47 0 21 0 0 0 chr18 13491821 13491842 -72497092 + AT_rich Low_complexity Low_complexity 1 21 0 1219 162 74 53 chr18 13491842 13491898 -72497036 - L1PB4 LINE L1 -2 6154 6101 2392 104 3 0 chr18 13491898 13492206 -72496728 + AluSx SINE Alu 1 309 -3 1219 162 74 53 chr18 13492206 13492433 -72496501 - L1PB4 LINE L1 -55 6101 5865 233 263 25 0 chr18 13492711 13492791 -72496143 - LTR67 LTR ERVL -68 489 408 330 269 141 70 chr18 13493223 13493450 -72495484 + MER112 DNA MER1_type 18 260 0 297 261 0 14 chr18 13494417 13494486 -72494448 + L2 LINE L2 3203 3270 -2 409 302 14 29 chr18 13494583 13494722 -72494212 - MIR SINE MIR -107 155 19 418 273 58 29 chr18 13495562 13495701 -72493233 - MER5A DNA MER1_type -1 188 46 311 369 37 16 chr18 13496215 13496412 -72492522 + MIR SINE MIR 8 206 -56 534 244 125 36 chr18 13497487 13497711 -72491223 + MIR SINE MIR 8 256 -6 256 322 23 76 chr18 13498066 13498237 -72490697 - MIR SINE MIR -50 212 51 332 287 28 28 chr18 13498635 13498743 -72490191 - MIR3 SINE MIR -34 174 67 1832 160 17 20 chr18 13499963 13500263 -72488671 + AluJo SINE Alu 1 299 -13 447 224 100 59 chr18 13500414 13500584 -72488350 - MER5B DNA MER1_type 0 178 2 395 73 0 0 chr18 13500689 13500744 -72488190 - MLT2A2 LTR ERVL 0 453 399 300 222 0 0 chr18 13500747 13500819 -72488115 + (CA)n Simple_repeat Simple_repeat 2 73 0 2677 100 31 0 chr18 13500821 13501212 -72487722 - MLT2A2 LTR ERVL -50 403 1 359 259 119 71 chr18 13501217 13501712 -72487222 - L2 LINE L2 -350 2964 2446 2060 130 38 0 chr18 13502981 13503297 -72485637 + L1PB3 LINE L1 5813 6140 -14 229 319 115 0 chr18 13504299 13504412 -72484522 + MIR SINE MIR 129 254 -8 260 206 82 0 chr18 13504684 13504757 -72484177 - LTR48 LTR ERV1 -167 620 542 362 236 30 89 chr18 13504795 13505037 -72483897 - MER34 LTR ERV1 -370 274 1 226 213 0 0 chr18 13505941 13505988 -72482946 + L1P LINE L1 5080 5126 -1020 390 114 13 51 chr18 13505989 13506068 -72482866 - L1M3 LINE L1 -662 5509 5434 191 290 83 48 chr18 13506120 13506265 -72482669 + L2 LINE L2 2755 2904 -410 317 253 42 53 chr18 13506381 13506476 -72482458 + L2 LINE L2 3219 3312 -1 250 273 91 8 chr18 13506523 13506644 -72482290 - L1M4 LINE L1 -1825 4321 4191 237 273 15 15 chr18 13508558 13508624 -72480310 + C-rich Low_complexity Low_complexity 1 66 0 234 0 0 0 chr18 13510109 13510135 -72478799 + (CCTG)n Simple_repeat Simple_repeat 1 26 0 681 180 17 0 chr18 13510135 13510307 -72478627 + CT-rich Low_complexity Low_complexity 4 178 0 997 210 0 11 chr18 13510511 13510752 -72478182 - L1M2 LINE L1 -4241 1975 1576 1285 46 0 0 chr18 13511139 13511292 -72477642 - L1PA8 LINE L1 -5 6167 6015 2040 154 99 5 chr18 13512206 13512601 -72476333 + MSTB1 LTR MaLR 1 432 0 279 79 0 0 chr18 13512760 13512798 -72476136 + (CA)n Simple_repeat Simple_repeat 2 39 0 22 0 0 0 chr18 13513395 13513417 -72475517 + AT_rich Low_complexity Low_complexity 1 22 0 286 293 164 29 chr18 13514749 13514889 -72474045 + MIR3 SINE MIR 30 188 -20 196 333 0 36 chr18 13515943 13516027 -72472907 + MIR SINE MIR 107 187 -75 468 318 53 6 chr18 13516608 13516778 -72472156 - MIR3 SINE MIR -9 199 22 413 312 129 6 chr18 13516884 13517054 -72471880 + MIR3 SINE MIR 3 193 -15 2079 90 0 8 chr18 13517060 13517327 -72471607 + AluSx SINE Alu 27 291 -21 224 245 19 0 chr18 13517950 13518003 -72470931 + L2 LINE L2 3219 3272 0 2221 237 31 20 chr18 13518326 13518930 -72470004 + MLT1E2 LTR MaLR 1 611 -15 337 294 17 17 chr18 13518941 13519060 -72469874 + MIR3 SINE MIR 85 203 -5 413 281 216 0 chr18 13519086 13519271 -72469663 + MIR SINE MIR 27 251 -11 714 224 152 63 chr18 13520381 13520597 -72468337 + MIR SINE MIR 5 245 -17 535 111 0 12 chr18 13520597 13520678 -72468256 + MADE1 DNA Mariner 1 80 0 714 224 152 63 chr18 13520678 13520698 -72468236 + MIR SINE MIR 245 262 0 2390 104 0 19 chr18 13520781 13521097 -72467837 + AluSx SINE Alu 1 310 -2 184 325 94 47 chr18 13522195 13522407 -72466527 + L2 LINE L2 1686 1907 -1407 231 232 14 14 chr18 13522458 13522527 -72466407 + Charlie5 DNA MER1_type 37 105 -2507 1589 191 42 8 chr18 13522532 13522909 -72466025 + Charlie5 DNA MER1_type 2235 2624 0 479 187 24 108 chr18 13524360 13524526 -72464408 + MER97b DNA MER1_type? 28 179 -874 1381 201 24 2 chr18 13526006 13526334 -72462600 - Tigger3b DNA MER2_type 0 1232 829 2241 131 24 0 chr18 13526335 13526663 -72462271 + MER1B DNA MER1_type 1 336 -3 3473 127 89 35 chr18 13526671 13527448 -72461486 - Tigger3b DNA MER2_type -398 833 3 189 74 0 0 chr18 13527448 13527475 -72461459 + (TG)n Simple_repeat Simple_repeat 2 28 0 2053 160 78 15 chr18 13527873 13528273 -72460661 + MSTB LTR MaLR 1 425 -1 319 345 30 5 chr18 13528291 13528494 -72460440 + MLT2F LTR ERVL 456 663 0 3418 120 10 2 chr18 13529977 13530470 -72458464 - LOR1a LTR ERV1 0 497 1 1688 124 7 33 chr18 13530831 13531106 -72457828 - MER101 LTR ERV1 -202 272 5 4352 116 20 6 chr18 13531149 13531804 -72457130 - L1MC1 LINE L1 -346 5987 5324 210 210 16 16 chr18 13531847 13531909 -72457025 + A-rich Low_complexity Low_complexity 1 62 0 227 265 137 20 chr18 13532233 13532335 -72456599 - MIR SINE MIR -11 251 138 513 229 43 7 chr18 13534036 13534176 -72454758 - MER5B DNA MER1_type -5 173 29 190 274 0 0 chr18 13534355 13534406 -72454528 - L2 LINE L2 0 3313 3263 708 218 12 24 chr18 13534876 13535041 -72453893 + MER5A DNA MER1_type 27 189 0 424 287 105 22 chr18 13535096 13535277 -72453657 + MLT1H LTR MaLR 29 224 -325 285 179 281 41 chr18 13535316 13535513 -72453421 + MLT1H LTR MaLR 224 545 -4 431 243 73 62 chr18 13536032 13536209 -72452725 - MLT1J2 LTR MaLR -6 444 266 229 284 182 34 chr18 13536788 13536964 -72451970 - MIR3 SINE MIR -2 206 5 3797 99 0 33 chr18 13538504 13538748 -72450186 + MER1A DNA MER1_type 3 254 -2446 2076 130 7 23 chr18 13538748 13539055 -72449879 - AluSx SINE Alu -10 302 1 3797 99 0 33 chr18 13539055 13539353 -72449581 + MER1A DNA MER1_type 254 527 0 1643 132 56 0 chr18 13539418 13539705 -72449229 - L1MA8 LINE L1 -2 6289 5987 358 254 8 74 chr18 13539902 13540024 -72448910 + MER5B DNA MER1_type 29 142 -36 1108 228 104 19 chr18 13540068 13540481 -72448453 + MLT1C LTR MaLR 16 463 -4 3679 183 62 108 chr18 13540799 13542083 -72446851 + Tigger3b DNA MER2_type 7 1231 0 6137 251 52 26 chr18 13542085 13543867 -72445067 + ERVL-E LTR ERVL 1842 3743 -2021 471 320 13 0 chr18 13543857 13544010 -72444924 + ERVL-E LTR ERVL 5581 5735 -29 * 781 284 149 38 chr18 13544013 13544517 -72444417 + MLT2E LTR ERVL 10 569 -59 1639 184 4 7 chr18 13545415 13545693 -72443241 - AluJb SINE Alu -35 277 1 195 313 0 0 chr18 13545697 13545745 -72443189 + MIR3 SINE MIR 110 157 -51 2968 6 0 0 chr18 13546027 13546340 -72442594 + AluYb8 SINE Alu 1 313 -5 1886 140 68 22 chr18 13546782 13547104 -72441830 - MER1B DNA MER1_type 0 337 1 606 266 32 15 chr18 13549508 13549720 -72439214 - MER106B DNA MER1_type 0 236 15 1695 169 23 29 chr18 13550027 13550334 -72438600 + AluJo SINE Alu 1 305 -7 447 260 51 61 chr18 13550334 13550530 -72438404 + MIR SINE MIR 50 243 -19 423 245 0 0 chr18 13550797 13550895 -72438039 + MIR SINE MIR 53 150 -112 2133 117 30 7 chr18 13551360 13551660 -72437274 - AluSx SINE Alu -5 307 1 27 0 0 0 chr18 13551713 13551740 -72437194 + AT_rich Low_complexity Low_complexity 1 27 0 8971 162 22 30 chr18 13551740 13553110 -72435824 - L1PA16 LINE L1 -5 6161 4781 2263 134 91 10 chr18 13553110 13553506 -72435428 + MSTA LTR MaLR 1 428 0 8971 162 22 30 chr18 13553506 13554991 -72433943 - L1PA16 LINE L1 -1385 4781 3313 253 323 11 11 chr18 13554992 13555085 -72433849 + MLT1L LTR MaLR 449 541 -74 2507 51 0 0 chr18 13556100 13556394 -72432540 - AluY SINE Alu -17 294 1 197 309 155 36 chr18 13557043 13557211 -72431723 + L2 LINE L2 2082 2269 -1045 1827 175 0 26 chr18 13557882 13558191 -72430743 - AluJo SINE Alu -11 301 1 2732 185 33 11 chr18 13558217 13558768 -72430166 + L1MB4 LINE L1 5618 6180 0 399 73 0 0 chr18 13559936 13559991 -72428943 + (CCAA)n Simple_repeat Simple_repeat 1 55 0 455 292 182 24 chr18 13562904 13563322 -72425612 + L3 LINE CR1 1069 1552 -25 1011 182 48 105 chr18 13563441 13563611 -72425323 - LTR37A LTR ERV1 0 426 285 1676 104 0 0 chr18 13563611 13563831 -72425103 + AluSg/x SINE Alu 90 309 -3 1011 182 48 105 chr18 13563831 13564011 -72424923 - LTR37A LTR ERV1 -141 285 96 1586 176 25 0 chr18 13565507 13565786 -72423148 - L1 LINE L1 -2155 3991 3706 * 7302 159 76 31 chr18 13565771 13566179 -72422755 + L1MA7 LINE L1 3920 4309 -1982 2481 71 7 0 chr18 13566179 13566475 -72422459 + AluY SINE Alu 1 298 -13 7302 159 76 31 chr18 13566475 13567843 -72421091 + L1MA7 LINE L1 4309 5813 -478 2351 156 33 14 chr18 13567843 13568267 -72420667 + MSTB1 LTR MaLR 1 432 0 7302 159 76 31 chr18 13568267 13568769 -72420165 + L1MA7 LINE L1 5813 6291 0 2144 108 30 3 chr18 13571162 13571459 -72417475 - AluSq SINE Alu -8 305 1 2463 238 61 55 chr18 13572558 13573514 -72415420 - L1ME3A LINE L1 -13 6226 5269 712 259 125 25 chr18 13573546 13574168 -72414766 - L1MEc LINE L1 -3701 2518 1884 307 313 12 0 chr18 13574730 13574813 -72414121 - MIR SINE MIR -106 102 19 456 211 102 22 chr18 13575655 13575835 -72413099 + MIR SINE MIR 23 221 -41 232 286 132 23 chr18 13576382 13576571 -72412363 + MIR SINE MIR 8 258 -4 321 96 0 19 chr18 13578511 13578563 -72410371 + MADE1 DNA Mariner 29 79 -1 22 35 0 0 chr18 13579311 13579340 -72409594 + GC_rich Low_complexity Low_complexity 1 29 0 23 78 0 0 chr18 13579821 13579872 -72409062 + AT_rich Low_complexity Low_complexity 1 51 0 297 0 0 0 chr18 13580555 13580588 -72408346 + (TG)n Simple_repeat Simple_repeat 2 34 0 1076 218 143 85 chr18 13580588 13581023 -72407911 - MER21B LTR ERV1 -399 464 5 3497 149 46 67 chr18 13581142 13581854 -72407080 - LTR1 LTR ERV1 -12 773 77 1608 141 23 64 chr18 13583516 13584009 -72404925 + MER51A LTR ERV1 1 634 0 474 308 47 12 chr18 13584011 13584183 -72404751 + MIR SINE MIR 85 262 0 2042 116 10 0 chr18 13584216 13584519 -72404415 - AluSx SINE Alu -6 306 1 29 0 0 0 chr18 13584928 13584957 -72403977 + AT_rich Low_complexity Low_complexity 1 29 0 428 303 19 19 chr18 13585238 13585393 -72403541 + MLT1J2 LTR MaLR 291 445 -5 280 350 83 0 chr18 13585468 13585588 -72403346 + MIR3 SINE MIR 52 181 -27 1848 131 0 42 chr18 13586267 13586573 -72402361 - AluSq SINE Alu -20 293 1 207 0 0 0 chr18 13586694 13586717 -72402217 + (T)n Simple_repeat Simple_repeat 1 23 0 391 232 17 30 chr18 13586730 13586921 -72402013 - L1MEc LINE L1 -4837 1643 1370 184 222 0 0 chr18 13586941 13586977 -72401957 - L2 LINE L2 0 3313 3278 303 335 26 48 chr18 13587072 13587299 -72401635 - L2 LINE L2 -222 3050 2829 236 325 61 31 chr18 13587322 13587485 -72401449 + L2 LINE L2 2244 2411 -903 286 324 34 17 chr18 13587540 13587716 -72401218 - L2 LINE L2 -586 2728 2550 183 80 0 0 chr18 13589620 13589645 -72399289 + (TTAA)n Simple_repeat Simple_repeat 2 26 0 245 319 99 0 chr18 13589721 13589812 -72399122 + MIR3 SINE MIR 108 207 -1 2034 97 19 50 chr18 13590470 13590791 -72398143 + AluSq SINE Alu 1 311 -2 1836 137 29 0 chr18 13591634 13591912 -72397022 - AluSx SINE Alu -18 294 9 240 299 28 28 chr18 13593377 13593484 -72395450 + MER112 DNA MER1_type 65 171 -89 347 186 0 0 chr18 13593597 13593656 -72395278 - MER112 DNA MER1_type -182 78 20 742 291 9 5 chr18 13593843 13594063 -72394871 + MER58A DNA MER1_type 2 222 -2 447 309 221 4 chr18 13594320 13594592 -72394342 - LTR16A LTR ERVL 0 450 120 356 211 56 0 chr18 13594762 13594852 -72394082 - HERV16 LTR ERVL -73 4923 4829 378 347 17 11 chr18 13595160 13595336 -72393598 - ERVL LTR ERVL -767 4997 4821 342 178 82 0 chr18 13595337 13595410 -72393524 - MER20 DNA MER1_type -107 112 34 818 238 67 67 chr18 13596850 13597149 -72391785 + MLT1J2 LTR MaLR 151 449 -1 274 291 94 31 chr18 13598400 13598527 -72390407 - L2 LINE L2 -1 3271 3137 307 224 66 13 chr18 13600048 13600124 -72388810 + MLT1J LTR MaLR 52 131 -380 885 216 82 5 chr18 13600173 13600381 -72388553 - MER58A DNA MER1_type 0 224 1 374 266 124 0 chr18 13600405 13600518 -72388416 + MLT1J LTR MaLR 332 458 -53 1731 164 0 26 chr18 13600520 13600830 -72388104 - AluJo SINE Alu -8 304 3 1598 258 140 4 chr18 13600862 13601320 -72387614 + MLT1H1 LTR MaLR 1 520 -35 1004 178 64 74 chr18 13601875 13602009 -72386925 + MER33 DNA MER1_type 27 161 -2424 2112 104 0 0 chr18 13602009 13602296 -72386638 + AluSg SINE Alu 1 287 -23 244 64 43 0 chr18 13602296 13602343 -72386591 + (TA)n Simple_repeat Simple_repeat 2 50 0 1004 178 64 74 chr18 13602343 13602505 -72386429 + MER33 DNA MER1_type 159 321 -3 431 244 79 63 chr18 13602677 13602976 -72385958 + MLT1J2 LTR MaLR 96 447 -3 1320 189 33 56 chr18 13604114 13604420 -72384514 + MLT1A1 LTR MaLR 67 365 0 22 0 0 0 chr18 13604507 13604529 -72384405 + AT_rich Low_complexity Low_complexity 1 22 0 1408 285 100 43 chr18 13604546 13605168 -72383766 - MER21B LTR ERV1 -109 754 98 1953 101 0 98 chr18 13605180 13605527 -72383407 + AluSq SINE Alu 1 313 0 282 308 55 0 chr18 13605564 13605655 -72383279 - MER21B LTR ERV1 -767 96 1 21 0 0 0 chr18 13606267 13606288 -72382646 + AT_rich Low_complexity Low_complexity 1 21 0 5443 136 17 22 chr18 13606655 13607192 -72381742 - MER49 LTR ERV1 0 923 390 2261 95 0 0 chr18 13607192 13607496 -72381438 - AluSx SINE Alu -8 304 1 5443 136 17 22 chr18 13607496 13607885 -72381049 - MER49 LTR ERV1 -533 390 1 1370 213 0 17 chr18 13609495 13609791 -72379143 + AluJo SINE Alu 1 291 -21 237 253 80 0 chr18 13610060 13610135 -72378799 - L1M4 LINE L1 -2376 3770 3690 566 277 113 61 chr18 13610150 13611153 -72377781 - L1M4 LINE L1 -2607 3539 2485 2152 110 0 0 chr18 13611255 13611554 -72377380 - AluSx SINE Alu -4 308 10 619 277 41 41 chr18 13612490 13612732 -72376202 - LTR16C LTR ERVL 0 491 250 708 135 128 8 chr18 13614059 13614227 -72374707 - FRAM SINE Alu 0 184 1 803 210 90 10 chr18 13614479 13614679 -72374255 + AluJb SINE Alu 86 301 -11 349 245 137 0 chr18 13615347 13615449 -72373485 - MER46C DNA MER2_type -217 121 6 308 43 22 0 chr18 13616155 13616201 -72372733 + MADE1 DNA Mariner 1 47 -33 186 208 0 21 chr18 13616879 13616927 -72372007 - MER5B DNA MER1_type -48 130 84 271 293 0 75 chr18 13616959 13617065 -72371869 - MER5B DNA MER1_type -80 98 1 385 238 0 0 chr18 13617210 13617290 -72371644 + MER81 DNA DNA 2 81 -33 190 317 0 73 chr18 13617419 13617501 -72371433 - MIR SINE MIR -62 200 125 1815 195 9 66 chr18 13617540 13617965 -72370969 - MER57A LTR ERV1 -2 401 1 1022 226 14 10 chr18 13617965 13618173 -72370761 - MER57A-int LTR ERV1 0 7537 7329 421 209 85 73 chr18 13618173 13618350 -72370584 - LTR54B LTR ERV1 -319 179 1 4832 235 41 35 chr18 13618355 13618722 -72370212 - MER57A-int LTR ERV1 -401 7136 6773 1875 129 0 55 chr18 13618722 13619048 -72369886 + AluSx SINE Alu 1 308 -4 4832 235 41 35 chr18 13619048 13619985 -72368949 - MER57A-int LTR ERV1 -764 6773 5824 1716 216 65 44 chr18 13620287 13620529 -72368405 - MER57A-int LTR ERV1 -1709 5828 5570 273 29 0 0 chr18 13620529 13620563 -72368371 + (TA)n Simple_repeat Simple_repeat 2 35 0 1716 216 65 44 chr18 13620563 13620779 -72368155 - MER57A-int LTR ERV1 -1967 5570 5360 27992 74 3 2 chr18 13620784 13625279 -72363655 - L1PA6 LINE L1 -2 6152 1659 9737 194 46 4 chr18 13625271 13625487 -72363447 - L1PBa LINE L1 -1955 4907 4702 * 2723 96 0 0 chr18 13625487 13625842 -72363092 - THE1A LTR MaLR 0 355 1 9737 194 46 4 chr18 13625842 13630185 -72358749 - L1PBa LINE L1 -2160 4702 6 401 185 44 88 chr18 13630191 13630396 -72358538 - MER57A-int LTR ERV1 -2637 3694 3499 283 83 0 0 chr18 13630396 13630432 -72358502 - U2 snRNA snRNA -152 36 1 597 183 38 39 chr18 13630432 13630762 -72358172 - MER57A-int LTR ERV1 -2819 3512 1707 565 198 34 186 chr18 13630867 13631104 -72357830 - MER57A-int LTR ERV1 -2867 3464 3264 503 187 35 141 chr18 13631158 13631356 -72357578 - MER57A-int LTR ERV1 -3068 3263 3087 240 35 0 0 chr18 13631381 13631410 -72357524 + (CA)n Simple_repeat Simple_repeat 1 29 0 2225 126 3 0 chr18 13631506 13631815 -72357119 - AluSg SINE Alu 0 310 1 359 231 54 34 chr18 13631821 13631934 -72357000 - MER57A-int LTR ERV1 -4616 1982 1864 2223 171 7 62 chr18 13631934 13632385 -72356549 + MSTB LTR MaLR 1 426 0 359 231 54 34 chr18 13632385 13632418 -72356516 - MER57A-int LTR ERV1 -4734 1864 1833 316 216 0 49 chr18 13632445 13632547 -72356387 - MER57A-int LTR ERV1 -3934 1189 1093 326 269 58 0 chr18 13632561 13632665 -72356269 - MER34C LTR ERV1 -321 264 155 292 279 9 36 chr18 13632702 13632813 -72356121 - MER57A-int LTR ERV1 -3673 2658 2551 3237 234 34 48 chr18 13632918 13633771 -72355163 - MER57A-int LTR ERV1 -6695 842 2 1808 154 9 129 chr18 13633774 13634214 -72354720 - MER57A LTR ERV1 -16 387 1 190 282 94 24 chr18 13634585 13634670 -72354264 + L2 LINE L2 3169 3259 -54 2136 180 7 27 chr18 13635303 13635440 -72353494 + L1 LINE L1 3269 3407 -2739 2392 69 0 26 chr18 13635440 13635746 -72353188 + AluY SINE Alu 1 298 -13 2136 180 7 27 chr18 13635746 13636046 -72352888 + L1 LINE L1 3407 3697 -2449 239 296 99 28 chr18 13637673 13637815 -72351119 + MIR SINE MIR 36 187 -75 1668 169 83 19 chr18 13638312 13638674 -72350260 + MLT1B LTR MaLR 1 385 -5 628 150 71 0 chr18 13638709 13638822 -72350112 - LTR12 LTR ERV1 -228 486 366 266 265 0 0 chr18 13638827 13638895 -72350039 - LTR30 LTR ERV1 -102 620 553 788 179 52 42 chr18 13638896 13639171 -72349763 - LTR12 LTR ERV1 -406 2032 100 255 151 19 38 chr18 13639171 13639224 -72349710 - LTR30 LTR ERV1 -670 52 1 1168 223 109 40 chr18 13639372 13639802 -72349132 + MLT1C LTR MaLR 1 460 -7 2062 107 4 0 chr18 13640276 13640546 -72348388 + AluSx SINE Alu 1 271 -41 473 266 81 29 chr18 13641315 13641488 -72347446 + MIR SINE MIR 80 261 -1 1417 35 6 0 chr18 13641526 13641695 -72347239 + L1PA5 LINE L1 5984 6153 -1 556 200 7 69 chr18 13643347 13643464 -72345470 - MLT1A1 LTR MaLR -116 249 142 578 122 0 0 chr18 13643464 13643546 -72345388 - Tigger7 DNA MER2_type 0 2487 2406 228 293 12 0 chr18 13643692 13643774 -72345160 - L1MC4 LINE L1 -1346 6696 6614 180 0 0 0 chr18 13643774 13643794 -72345140 + (TA)n Simple_repeat Simple_repeat 2 21 0 1461 180 0 0 chr18 13645187 13645420 -72343514 - MLT1A1 LTR MaLR 0 365 133 2211 126 44 30 chr18 13645421 13645786 -72343148 - Tigger7 DNA MER2_type 0 2587 2218 4167 166 29 3 chr18 13645786 13646501 -72342433 - Tigger7 DNA MER2_type -1717 770 37 784 167 8 0 chr18 13646517 13646649 -72342285 - MLT1A1 LTR MaLR -232 133 1 213 175 35 0 chr18 13649490 13649547 -72339387 + (CA)n Simple_repeat Simple_repeat 2 60 0 3765 157 40 23 chr18 13650804 13651509 -72337425 + LTR62 LTR ERVK 1 717 -2 2339 117 0 0 chr18 13651706 13652014 -72336920 - AluSx SINE Alu -4 308 1 332 294 66 20 chr18 13652236 13652433 -72336501 - MIR SINE MIR -7 255 50 356 304 89 66 chr18 13653143 13653400 -72335534 - L2 LINE L2 -108 3164 2902 200 271 0 43 chr18 13653511 13653581 -72335353 + MIR SINE MIR 7 73 -189 194 0 39 0 chr18 13653582 13653608 -72335326 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 202 244 26 39 chr18 13653904 13653982 -72334952 - L2 LINE L2 -405 2908 2832 410 285 51 25 chr18 13654028 13654186 -72334748 - MER5B DNA MER1_type -16 162 1 1991 97 41 72 chr18 13654446 13654765 -72334169 + AluSq SINE Alu 1 309 -4 268 200 0 0 chr18 13654865 13654920 -72334014 - MER53 DNA DNA -1 188 134 237 290 110 0 chr18 13655072 13655172 -72333762 - L2 LINE L2 -957 2357 2247 287 241 161 0 chr18 13655259 13655346 -72333588 + MIR SINE MIR 46 146 -116 1499 193 132 38 chr18 13655369 13655762 -72333172 - MSTB2 LTR MaLR 0 457 28 1943 199 3 0 chr18 13655772 13656118 -72332816 - MER7A DNA MER2_type 0 346 2 201 237 0 0 chr18 13656678 13656737 -72332197 + (CACG)n Simple_repeat Simple_repeat 1 59 0 195 139 0 0 chr18 13659676 13659712 -72329222 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 1669 176 57 0 chr18 13659869 13660148 -72328786 + AluJb SINE Alu 1 295 -17 253 241 17 0 chr18 13660178 13660236 -72328698 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 208 315 28 19 chr18 13711024 13711132 -72277802 - MIR SINE MIR -59 203 95 2151 96 6 3 chr18 13711681 13711993 -72276941 + AluSq SINE Alu 1 313 0 403 297 69 24 chr18 13712357 13712479 -72276455 + MLT1J2 LTR MaLR 75 190 -260 893 158 175 0 chr18 13712479 13712656 -72276278 + MER3 DNA MER1_type 1 208 -1 403 297 69 24 chr18 13712656 13712779 -72276155 + MLT1J2 LTR MaLR 190 331 -119 245 180 20 20 chr18 13712821 13712871 -72276063 + MLT1I LTR MaLR 354 403 -6 208 299 58 11 chr18 13714864 13714951 -72273983 + MIR3 SINE MIR 66 156 -52 401 317 72 88 chr18 13715045 13715376 -72273558 - L2 LINE L2 -13 3259 2934 598 278 61 19 chr18 13716692 13716904 -72272030 - MIR SINE MIR -8 254 34 1760 171 0 0 chr18 13716916 13717209 -72271725 - AluJo SINE Alu -13 299 7 715 352 73 18 chr18 13717245 13717850 -72271084 - L2 LINE L2 -797 2517 1880 311 305 28 43 chr18 13717864 13718005 -72270929 - L2 LINE L2 -202 3070 2932 564 252 56 66 chr18 13718295 13718632 -72270302 - MLT1J2 LTR MaLR -10 440 71 26 30 0 0 chr18 13718688 13718721 -72270213 + AT_rich Low_complexity Low_complexity 1 33 0 584 289 74 50 chr18 13719339 13719716 -72269218 + L2 LINE L2 2821 3206 -107 336 316 40 20 chr18 13719777 13719929 -72269005 - L1ME LINE L1 -462 5659 5505 12105 124 36 7 chr18 13720412 13722296 -72266638 - Tigger1 DNA MER2_type 0 2418 480 614 179 23 6 chr18 13722296 13722469 -72266465 + CT-rich Low_complexity Low_complexity 4 179 0 486 227 0 0 chr18 13722487 13722584 -72266350 - AluJo SINE Alu -94 218 122 2779 154 30 7 chr18 13722590 13723052 -72265882 - Tigger1 DNA MER2_type -1945 473 1 180 304 33 22 chr18 13723625 13723717 -72265217 + MIR3 SINE MIR 64 156 -52 2164 116 0 0 chr18 13724522 13724833 -72264101 - AluY SINE Alu 0 311 1 28 0 0 0 chr18 13725410 13725438 -72263496 + AT_rich Low_complexity Low_complexity 1 28 0 777 177 0 0 chr18 13725440 13725564 -72263370 - FLAM_A SINE Alu -5 128 5 1552 190 21 0 chr18 13725576 13725866 -72263068 - AluJo SINE Alu -16 296 1 198 204 130 0 chr18 13726697 13726751 -72262183 + MIR SINE MIR 124 184 -78 285 203 43 0 chr18 13727563 13727632 -72261302 + LTR67 LTR ERVL 481 552 -5 1677 156 17 22 chr18 13729982 13730330 -72258604 - MER4A LTR ERV1 0 664 261 633 103 21 10 chr18 13730330 13730427 -72258507 - MER4A LTR ERV1 -566 98 1 185 133 467 0 chr18 13730607 13730682 -72258252 - MER5A DNA MER1_type -29 160 51 1308 294 67 52 chr18 13732345 13733165 -72255769 - HAL1 LINE L1 -247 2260 1429 248 302 0 0 chr18 13734210 13734273 -72254661 + L2 LINE L2 3206 3268 -4 465 202 20 20 chr18 13736054 13736153 -72252781 + MIR SINE MIR 65 163 -99 201 182 0 23 chr18 13736932 13736976 -72251958 + CT-rich Low_complexity Low_complexity 3 45 0 3224 112 27 24 chr18 13737015 13737526 -72251408 - LTR10D LTR ERV1 0 513 1 810 238 54 46 chr18 13738501 13738741 -72250193 - L1MB7 LINE L1 0 6184 5943 208 250 145 0 chr18 13738787 13738863 -72250071 + L2 LINE L2 3183 3269 -44 321 272 75 64 chr18 13740113 13740286 -72248648 + MLT1J LTR MaLR 36 210 -301 186 43 0 0 chr18 13740490 13740513 -72248421 + (CGGGGG)n Simple_repeat Simple_repeat 2 24 0 2192 92 0 16 chr18 13740601 13740905 -72248029 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr18 13741406 13741427 -72247507 + AT_rich Low_complexity Low_complexity 1 21 0 326 270 61 17 chr18 13742393 13742508 -72246426 + MIR SINE MIR 40 159 -103 326 269 0 7 chr18 13743015 13743156 -72245778 + (CA)n Simple_repeat Simple_repeat 2 141 0 392 242 91 19 chr18 13744015 13744152 -72244782 + MIR3 SINE MIR 21 169 -39 1443 151 24 28 chr18 13744254 13744505 -72244429 + AluJb SINE Alu 17 266 -46 2135 186 13 8 chr18 13744548 13744945 -72243989 - MER57A LTR ERV1 -4 399 1 253 309 36 54 chr18 13745139 13745307 -72243627 - MIR SINE MIR -75 187 23 249 342 108 8 chr18 13746092 13746212 -72242722 - MIR3 SINE MIR -64 144 13 270 0 0 0 chr18 13746645 13746675 -72242259 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 624 311 231 20 chr18 13746733 13747653 -72241281 + L2 LINE L2 1774 2888 -426 525 330 49 36 chr18 13747738 13747962 -72240972 - MIR SINE MIR -13 249 23 251 272 161 25 chr18 13748075 13748237 -72240697 - L3 LINE CR1 -173 1404 1221 215 348 33 11 chr18 13748363 13748455 -72240479 - MIR SINE MIR -92 116 23 274 291 127 9 chr18 13749231 13749341 -72239593 - L2 LINE L2 -7 3306 3184 344 227 103 0 chr18 13749652 13749749 -72239185 - L1ME3A LINE L1 -5 6165 6059 2649 181 27 56 chr18 13749826 13750521 -72238413 - L1M4 LINE L1 -1066 5080 4406 1493 184 84 51 chr18 13751079 13751493 -72237441 + MSTC LTR MaLR 1 428 0 353 375 39 62 chr18 13751508 13751924 -72237010 - L2 LINE L2 -5 3267 2862 1134 291 58 13 chr18 13752188 13752570 -72236364 + MLT1J LTR MaLR 111 509 -2 329 208 77 62 chr18 13754142 13754272 -72234662 - MIR SINE MIR -25 237 106 324 0 0 0 chr18 13755340 13755376 -72233558 + (CA)n Simple_repeat Simple_repeat 2 37 0 293 340 0 0 chr18 13755415 13755515 -72233419 - MIR SINE MIR -11 251 152 231 313 12 12 chr18 13756588 13756668 -72232266 - L2 LINE L2 0 3272 3193 692 292 76 44 chr18 13756981 13757296 -72231638 + MLT1I LTR MaLR 65 389 -20 1897 146 3 7 chr18 13757609 13757956 -72230978 + AluSq SINE Alu 1 313 0 1933 101 39 11 chr18 13759893 13760179 -72228755 + AluSg SINE Alu 1 294 -16 2362 54 7 0 chr18 13760418 13760714 -72228220 - AluY SINE Alu -13 298 1 413 284 212 4 chr18 13760746 13761024 -72227910 + L1MC4a LINE L1 7486 7994 -1 2560 136 3 13 chr18 13761949 13762339 -72226595 + MER4B LTR ERV1 1 386 -224 201 195 37 98 chr18 13762401 13762483 -72226451 + MIR3 SINE MIR 132 208 0 541 260 100 30 chr18 13763268 13763468 -72225466 + MLT1I LTR MaLR 196 409 0 689 294 116 35 chr18 13763751 13764446 -72224488 - L2 LINE L2 -122 3191 2433 342 300 39 50 chr18 13765294 13765474 -72223460 + MER5A DNA MER1_type 7 184 -5 846 275 22 9 chr18 13766363 13766592 -72222342 - MIR SINE MIR -6 256 25 1981 125 0 4 chr18 13768760 13769041 -72219893 - AluSx SINE Alu -14 298 19 568 118 11 0 chr18 13769876 13769969 -72218965 - AluSq SINE Alu -4 309 216 925 91 56 14 chr18 13769970 13770113 -72218821 - AluSq SINE Alu -158 155 7 336 271 164 0 chr18 13770142 13770264 -72218670 + MIR SINE MIR 118 259 -3 1491 206 91 19 chr18 13770277 13770641 -72218293 - MLT1B LTR MaLR 0 390 1 223 273 27 82 chr18 13770708 13770818 -72218116 - MIR SINE MIR -63 145 42 354 267 12 0 chr18 13771109 13771195 -72217739 + MIR SINE MIR 64 150 -58 822 136 0 16 chr18 13772092 13772249 -72216685 + FLAM_C SINE Alu 2 133 0 2198 101 0 19 chr18 13772371 13772689 -72216245 + AluSx SINE Alu 1 312 0 203 275 58 14 chr18 13773598 13773667 -72215267 + MIR SINE MIR 145 216 -46 2386 65 0 0 chr18 13773679 13773973 -72214961 + AluSc SINE Alu 1 294 -15 334 340 61 14 chr18 13773974 13774121 -72214813 + L2 LINE L2 3110 3263 -9 238 374 46 66 chr18 13775106 13775408 -72213526 + L2 LINE L2 2977 3272 0 333 319 113 42 chr18 13775697 13775910 -72213024 + L3 LINE CR1 1200 1427 -150 2317 85 0 7 chr18 13777730 13778025 -72210909 + AluSq SINE Alu 5 297 -16 784 169 23 0 chr18 13779980 13780110 -72208824 + AluJo/FLAM SINE Alu 1 133 -169 1510 148 0 70 chr18 13780112 13780396 -72208538 + AluJb SINE Alu 49 312 0 1898 136 10 33 chr18 13782401 13782702 -72206232 - AluJb SINE Alu -18 294 1 2126 123 19 48 chr18 13785186 13785561 -72203373 + THE1B LTR MaLR 1 364 0 326 363 50 0 chr18 13786294 13786534 -72202400 + L2 LINE L2 2232 2483 -831 2132 125 0 3 chr18 13786957 13787254 -72201680 + AluSx SINE Alu 1 296 -16 203 327 27 9 chr18 13788831 13788941 -72199993 + MIR SINE MIR 117 228 -34 250 244 24 24 chr18 13789284 13789366 -72199568 - HsTC2 DNA Tc2 -7 1891 1810 248 314 8 17 chr18 13790053 13790171 -72198763 + (CA)n Simple_repeat Simple_repeat 2 118 0 285 75 0 0 chr18 13790458 13790498 -72198436 + (CA)n Simple_repeat Simple_repeat 1 40 0 234 330 66 0 chr18 13791279 13791370 -72197564 - MER5A DNA MER1_type -4 185 89 1100 212 76 36 chr18 13792055 13792385 -72196549 + MER2 DNA MER2_type 2 344 0 1058 147 25 108 chr18 13792478 13792757 -72196177 + L1MB8 LINE L1 5920 6175 -3 252 0 0 0 chr18 13793018 13793046 -72195888 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 894 248 161 28 chr18 13795249 13795721 -72193213 + MLT1H LTR MaLR 9 548 -1 394 244 171 40 chr18 13795968 13796144 -72192790 + MIR SINE MIR 37 235 -27 240 286 99 87 chr18 13796320 13796891 -72192043 - L2 LINE L2 -2 3270 2717 182 217 0 0 chr18 13797013 13797059 -72191875 + L2 LINE L2 3268 3313 0 339 252 72 27 chr18 13799373 13799484 -72189450 - L2 LINE L2 -4 3309 3194 339 242 40 20 chr18 13799533 13799632 -72189302 + L1ME3A LINE L1 6042 6142 -28 472 238 32 8 chr18 13800435 13800561 -72188373 + L1MEc LINE L1 49 177 -6219 380 262 52 43 chr18 13800563 13800773 -72188161 + MER89 LTR ERV1 1 212 -347 240 303 26 33 chr18 13800864 13801016 -72187918 + MER89 LTR ERV1 69 219 -340 * 266 246 68 71 chr18 13800991 13801205 -72187729 + MER89 LTR ERV1 59 239 -320 2367 125 97 15 chr18 13801240 13801631 -72187303 + MSTA LTR MaLR 1 423 -5 938 219 24 5 chr18 13801619 13801824 -72187110 + MER89 LTR ERV1 186 394 -165 * 552 294 20 20 chr18 13801865 13802069 -72186865 + L1MEc LINE L1 180 383 -6013 263 157 39 0 chr18 13802092 13802143 -72186791 - LTR16C LTR ERVL -152 339 287 523 254 29 74 chr18 13802303 13802745 -72186189 - L1 LINE L1 -2159 3987 3579 2437 223 76 24 chr18 13802942 13803745 -72185189 - Zaphod DNA AcHobo -186 3845 3001 1706 108 0 0 chr18 13804032 13804255 -72184679 - AluSg/x SINE Alu -21 289 67 3234 231 114 56 chr18 13804341 13804847 -72184087 - Zaphod DNA AcHobo -2360 1671 1196 2286 104 0 3 chr18 13804847 13805146 -72183788 - AluSg SINE Alu -12 298 1 3234 231 114 56 chr18 13805146 13805800 -72183134 - Zaphod DNA AcHobo -2835 1196 410 1978 163 0 16 chr18 13805800 13806113 -72182821 + AluSx SINE Alu 1 308 -4 3234 231 114 56 chr18 13806113 13806373 -72182561 - Zaphod DNA AcHobo -3621 410 167 348 267 46 46 chr18 13806406 13806586 -72182348 + L1M4 LINE L1 3176 3358 -2788 2205 134 129 5 chr18 13806586 13806967 -72181967 + MSTA LTR MaLR 1 428 0 348 267 46 46 chr18 13806967 13807026 -72181908 + L1M4 LINE L1 3357 3415 -2731 27 0 0 0 chr18 13807262 13807289 -72181645 + AT_rich Low_complexity Low_complexity 1 27 0 1847 144 60 41 chr18 13807635 13808003 -72180931 - THE1C LTR MaLR 0 375 1 480 18 0 0 chr18 13808057 13808114 -72180820 + (TC)n Simple_repeat Simple_repeat 2 58 0 315 0 0 0 chr18 13808113 13808148 -72180786 + (TA)n Simple_repeat Simple_repeat 2 36 0 * 742 304 90 56 chr18 13808301 13808876 -72180058 - L1ME LINE L1 -5282 788 183 2571 238 72 0 chr18 13808876 13809486 -72179448 + MLT1E1 LTR MaLR 1 654 0 742 304 90 56 chr18 13809486 13809608 -72179326 - L1ME LINE L1 -5887 183 67 355 181 0 32 chr18 13811749 13811843 -72177091 + GA-rich Low_complexity Low_complexity 3 93 0 201 154 0 0 chr18 13812357 13812396 -72176538 + GA-rich Low_complexity Low_complexity 1 39 0 800 198 20 6 chr18 13812420 13812773 -72176161 + GA-rich Low_complexity Low_complexity 1 358 0 249 354 137 27 chr18 13816098 13816874 -72172060 + L2 LINE L2 1868 2728 -586 2236 121 0 0 chr18 13817309 13817615 -72171319 - AluSx SINE Alu -6 306 1 310 270 51 58 chr18 13818836 13818973 -72169961 + MIR SINE MIR 33 168 -94 1041 243 78 14 chr18 13819309 13819605 -72169329 + MER58B DNA MER1_type 27 341 0 257 189 0 0 chr18 13819617 13819667 -72169267 + MIR SINE MIR 97 141 -67 396 300 103 21 chr18 13820150 13820440 -72168494 - MLT1H LTR MaLR -184 365 52 210 71 0 0 chr18 13822453 13822481 -72166453 + (T)n Simple_repeat Simple_repeat 1 28 0 482 334 96 17 chr18 13823079 13823435 -72165499 + L3 LINE CR1 1164 1547 -30 279 272 117 19 chr18 13825149 13825311 -72163623 + MIR SINE MIR 20 197 -65 448 282 29 18 chr18 13825384 13825554 -72163380 - MIR SINE MIR -13 249 78 466 304 95 21 chr18 13825667 13825950 -72162984 + MARNA DNA Mariner 183 486 -100 4932 192 40 11 chr18 13826162 13826478 -72162456 - L1MA9 LINE L1 -41 6271 5966 226 0 59 0 chr18 13826478 13826512 -72162422 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 4932 192 40 11 chr18 13826512 13827897 -72161037 - L1MA9 LINE L1 -346 5966 4515 455 198 24 79 chr18 13827897 13828023 -72160911 + MER69A DNA AcHobo 13 131 -46 195 246 0 16 chr18 13828190 13828251 -72160683 - MIR SINE MIR -46 216 157 197 196 59 20 chr18 13828453 13828504 -72160430 - MIR SINE MIR -143 119 67 190 282 13 13 chr18 13828554 13828632 -72160302 - MIR3 SINE MIR -53 155 78 385 330 24 15 chr18 13828697 13828903 -72160031 + MIR SINE MIR 31 238 -24 283 280 16 40 chr18 13832747 13832872 -72156062 - L3 LINE CR1 -193 1384 1263 458 296 98 37 chr18 13833288 13833616 -72155318 - L1ME LINE L1 -527 5635 5288 314 240 117 39 chr18 13833635 13833789 -72155145 - L1 LINE L1 -885 5261 5096 393 276 0 0 chr18 13833809 13833907 -72155027 - U13 snRNA snRNA -6 98 1 382 232 12 0 chr18 13834088 13834170 -72154764 - MER63 DNA MER1_type 0 1061 979 320 289 84 62 chr18 13834294 13835017 -72153917 - L1 LINE L1 -1251 4895 4157 1520 270 83 34 chr18 13835069 13835952 -72152982 + L1M4 LINE L1 1115 2200 -4625 1805 148 39 0 chr18 13835952 13836235 -72152699 + AluSx SINE Alu 1 294 -18 1520 270 83 34 chr18 13836235 13836418 -72152516 + L1M4 LINE L1 2200 2373 -4452 276 111 0 0 chr18 13836437 13836482 -72152452 + (TG)n Simple_repeat Simple_repeat 2 46 0 5653 202 62 31 chr18 13836487 13838253 -72150681 + L1MDa LINE L1 1052 2761 -3779 4574 122 34 71 chr18 13838253 13839068 -72149866 - LTR1 LTR ERV1 0 785 1 5653 202 62 31 chr18 13839068 13839281 -72149653 + L1MDa LINE L1 2761 2966 -3574 1845 176 59 39 chr18 13839281 13839668 -72149266 + MSTD LTR MaLR 2 396 0 5653 202 62 31 chr18 13839668 13839993 -72148941 + L1MDa LINE L1 2966 3427 -3113 2323 92 3 0 chr18 13840619 13840924 -72148010 + AluY SINE Alu 1 306 -5 234 0 0 0 chr18 13842885 13842911 -72146023 + (CA)n Simple_repeat Simple_repeat 2 27 0 24 0 0 0 chr18 13843319 13843343 -72145591 + AT_rich Low_complexity Low_complexity 1 24 0 2041 154 39 6 chr18 13843373 13843710 -72145224 + MER7A DNA MER2_type 1 346 0 1051 306 32 16 chr18 13844732 13845170 -72143764 + L1MC/D LINE L1 5353 5797 -2011 285 254 103 8 chr18 13845504 13845630 -72143304 + MER117 DNA MER1_type 20 157 -40 262 255 0 0 chr18 13845636 13845687 -72143247 + G-rich Low_complexity Low_complexity 5 55 0 457 77 0 0 chr18 13846534 13846599 -72142335 - L1PA13 LINE L1 -5 6158 6094 22 0 0 0 chr18 13851146 13851168 -72137766 + AT_rich Low_complexity Low_complexity 1 22 0 627 293 45 12 chr18 13851618 13851860 -72137074 + MIR SINE MIR 3 252 -10 215 350 17 17 chr18 13852677 13852797 -72136137 - MIR SINE MIR -123 139 20 689 210 0 22 chr18 13853257 13853395 -72135539 + AluJo SINE Alu 2 136 -176 1008 269 18 14 chr18 13853575 13853850 -72135084 - MLT1E3 LTR MaLR -23 601 326 233 291 0 0 chr18 13855147 13855202 -72133732 - MIR SINE MIR -21 241 187 269 322 27 2 chr18 13855663 13855795 -72133139 - MIR SINE MIR -67 141 6 266 335 74 6 chr18 13855769 13855945 -72132989 - L3 LINE CR1 -160 1417 1230 * 2323 110 0 0 chr18 13856020 13856320 -72132614 - AluSx SINE Alu -7 305 6 1766 186 3 0 chr18 13856356 13856651 -72132283 + AluJb SINE Alu 5 300 -12 221 193 0 18 chr18 13857334 13857391 -72131543 + (CTTAT)n Simple_repeat Simple_repeat 4 59 0 2233 136 0 0 chr18 13858905 13859213 -72129721 + AluSx SINE Alu 1 308 -4 1578 84 35 22 chr18 13860490 13860716 -72128218 + MER30 DNA MER1_type 1 229 -1 225 273 0 0 chr18 13861623 13861678 -72127256 - MER112 DNA MER1_type -189 71 17 2547 67 0 0 chr18 13862161 13862460 -72126474 + AluY SINE Alu 1 299 -12 1056 199 266 42 chr18 13862918 13863324 -72125610 + MLT2B2 LTR ERVL 15 511 -4 4067 164 14 17 chr18 13863398 13864122 -72124812 - MER72 LTR ERV1 0 722 1 236 347 20 88 chr18 13864127 13864378 -72124556 - L2 LINE L2 -44 3228 2995 2982 178 47 84 chr18 13864417 13865170 -72123764 - LTR8A LTR ERV1 -2 725 1 1840 168 22 92 chr18 13865357 13865845 -72123089 - MLT1D LTR MaLR -33 472 19 220 295 116 11 chr18 13866071 13866166 -72122768 - MIR SINE MIR -63 145 41 2265 80 6 55 chr18 13867396 13867707 -72121227 + AluSg SINE Alu 1 296 -14 198 0 0 0 chr18 13869239 13869261 -72119673 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 297 290 43 0 chr18 13870401 13870494 -72118440 - L3 LINE CR1 -3 1574 1478 549 303 40 15 chr18 13870612 13870810 -72118124 - MIR SINE MIR -29 233 31 1699 146 29 13 chr18 13871696 13872005 -72116929 + L1MC2 LINE L1 6005 6318 -26 2181 104 0 57 chr18 13872016 13872334 -72116600 - AluSx SINE Alu -12 300 1 218 176 20 0 chr18 13872417 13872468 -72116466 + A-rich Low_complexity Low_complexity 2 53 0 403 248 65 78 chr18 13873029 13873182 -72115752 - MER91A DNA MER1_type -30 166 16 2204 73 43 26 chr18 13873501 13873803 -72115131 + AluSx SINE Alu 1 307 -5 2118 109 11 0 chr18 13874065 13874341 -72114593 + AluSx SINE Alu 1 279 -33 216 0 0 0 chr18 13874341 13874365 -72114569 + (CA)n Simple_repeat Simple_repeat 1 24 0 1088 259 75 17 chr18 13874536 13874938 -72113996 + HAL1b LINE L1 217 641 -707 400 168 84 32 chr18 13874960 13875055 -72113879 + HAL1b LINE L1 432 531 -817 473 253 98 6 chr18 13875058 13875232 -72113702 + HAL1b LINE L1 614 803 -545 387 264 39 32 chr18 13875241 13875396 -72113538 + HAL1b LINE L1 831 986 -362 525 135 0 0 chr18 13875402 13875476 -72113458 + AluS SINE Alu 2 75 -238 237 205 51 13 chr18 13877416 13877494 -72111440 + MIR SINE MIR 63 143 -65 2046 117 4 4 chr18 13877769 13878050 -72110884 + AluSx SINE Alu 2 282 -30 376 198 125 0 chr18 13878231 13878327 -72110607 - MER81 DNA DNA -3 111 4 611 199 143 6 chr18 13878474 13878635 -72110299 + MER5A DNA MER1_type 1 183 -6 1735 148 29 0 chr18 13880821 13881099 -72107835 + L1PA15 LINE L1 5865 6150 -15 1523 218 131 104 chr18 13881735 13882702 -72106232 - Charlie7 DNA MER1_type -131 2481 1489 1975 144 47 0 chr18 13882723 13883021 -72105913 + AluSx SINE Alu 1 312 0 396 262 105 12 chr18 13883189 13883361 -72105573 - Charlie7 DNA MER1_type -2420 192 5 307 244 73 85 chr18 13884578 13884814 -72104120 - MIR SINE MIR -17 245 3 427 267 108 82 chr18 13885081 13885471 -72103463 + LTR67 LTR ERVL 2 401 -156 187 341 12 0 chr18 13885676 13885758 -72103176 - MIR SINE MIR -55 207 125 1919 139 24 14 chr18 13885786 13886081 -72102853 + AluSx SINE Alu 2 299 -13 185 233 0 17 chr18 13888350 13888410 -72100524 + G-rich Low_complexity Low_complexity 5 63 0 209 261 0 46 chr18 13889230 13889295 -72099639 + L2 LINE L2 3252 3313 0 219 345 0 11 chr18 13889536 13889623 -72099311 - MIR SINE MIR -163 99 14 1464 146 39 35 chr18 13892324 13892578 -72096356 - AluJo SINE Alu -11 301 47 256 260 110 27 chr18 13893372 13893492 -72095442 + MIR SINE MIR 32 166 -46 981 194 47 30 chr18 13893686 13893918 -72095016 - MER106A DNA MER1_type 0 236 1 500 171 122 24 chr18 13893981 13894104 -72094830 - MIR SINE MIR -93 169 35 269 257 37 46 chr18 13897386 13897495 -72091439 + MIR SINE MIR 117 224 -38 261 253 0 71 chr18 13897554 13897653 -72091281 - MER3 DNA MER1_type -6 203 112 1830 217 3 0 chr18 13897912 13898258 -72090676 + MER7A DNA MER2_type 2 346 0 8624 93 10 13 chr18 13898698 13899885 -72089049 + HERV9 LTR ERV1 815 1998 -6401 843 173 132 25 chr18 13900814 13901011 -72087923 + MER20 DNA MER1_type 1 218 -1 3256 210 39 16 chr18 13901630 13902400 -72086534 - L1M4 LINE L1 -795 5351 4564 300 252 12 2 chr18 13902423 13902518 -72086416 + MIR SINE MIR 73 168 -40 26 0 0 0 chr18 13902712 13902738 -72086196 + AT_rich Low_complexity Low_complexity 1 26 0 252 0 0 0 chr18 13953129 13953157 -72035777 + (T)n Simple_repeat Simple_repeat 1 28 0 231 235 0 0 chr18 13954084 13954135 -72034799 + MER113 DNA MER1_type? 7 57 -464 1737 120 0 8 chr18 13956879 13957145 -72031789 + AluSx SINE Alu 45 308 0 28 0 0 0 chr18 13957799 13957827 -72031107 + AT_rich Low_complexity Low_complexity 1 28 0 257 272 98 0 chr18 13958312 13958404 -72030530 + L1ME4a LINE L1 5599 5699 -422 2325 112 0 0 chr18 13958451 13958763 -72030171 + AluSx SINE Alu 1 312 0 279 287 147 31 chr18 13958803 13958932 -72030002 - L2 LINE L2 -4 3268 3125 2079 135 3 0 chr18 13960020 13960316 -72028618 + AluSx SINE Alu 1 297 -15 257 278 31 41 chr18 13960574 13960671 -72028263 - L2 LINE L2 -1344 1970 1875 455 263 51 57 chr18 13961207 13961382 -72027552 + MIR SINE MIR 56 229 -33 1996 130 14 3 chr18 13961954 13962246 -72026688 + AluSc SINE Alu 1 295 -14 23 33 0 0 chr18 13962246 13962276 -72026658 + AT_rich Low_complexity Low_complexity 1 30 0 2165 122 3 3 chr18 13962547 13962843 -72026091 - AluSg SINE Alu -14 296 1 1552 215 133 39 chr18 13963074 13963272 -72025662 - L2 LINE L2 -1101 2213 2035 2483 91 3 0 chr18 13963272 13963581 -72025353 - AluSp SINE Alu -3 310 1 1552 215 133 39 chr18 13963581 13963969 -72024965 - L2 LINE L2 -1279 2035 1572 216 295 49 0 chr18 13964409 13964470 -72024464 - L2 LINE L2 -51 3221 3158 968 189 0 0 chr18 13964527 13964696 -72024238 + FRAM SINE Alu 1 169 -7 201 74 0 0 chr18 13967945 13967972 -72020962 + (CA)n Simple_repeat Simple_repeat 2 28 0 201 74 0 0 chr18 13968275 13968302 -72020632 + (A)n Simple_repeat Simple_repeat 1 27 0 455 255 64 34 chr18 13968745 13968949 -72019985 + L1ME4a LINE L1 5673 5882 -239 2514 69 3 0 chr18 13968994 13969300 -72019634 + AluY SINE Alu 1 307 -4 2338 84 7 0 chr18 13969894 13970191 -72018743 + AluY SINE Alu 1 299 -12 245 236 36 0 chr18 13971796 13971851 -72017083 - MLT1L LTR MaLR -79 536 480 1945 287 113 46 chr18 13972011 13973629 -72015305 - L1MEc LINE L1 -4602 1794 69 327 265 68 8 chr18 13974377 13974494 -72014440 - MER5C DNA MER1_type -200 124 1 22 80 0 0 chr18 13975454 13975504 -72013430 + AT_rich Low_complexity Low_complexity 1 50 0 341 269 13 0 chr18 13976738 13976816 -72012118 - MER5A DNA MER1_type -71 118 40 2616 143 23 46 chr18 13977225 13977394 -72011540 - L1MA7 LINE L1 0 6291 6120 183 100 0 0 chr18 13977394 13977424 -72011510 + (TTTTA)n Simple_repeat Simple_repeat 3 32 0 2128 123 0 0 chr18 13977429 13977721 -72011213 - AluSx SINE Alu -20 292 1 2616 143 23 46 chr18 13977721 13978026 -72010908 - L1MA7 LINE L1 -175 6116 5822 333 286 131 40 chr18 13979209 13979607 -72009327 + L2 LINE L2 2164 2597 -717 575 274 186 53 chr18 13979685 13980141 -72008793 - L2 LINE L2 -1437 1877 1361 541 294 47 62 chr18 13980199 13980474 -72008460 + L2 LINE L2 2919 3189 -124 2435 83 0 10 chr18 13981105 13981417 -72007517 - AluSc SINE Alu 0 309 1 255 125 0 0 chr18 13981436 13981476 -72007458 + (A)n Simple_repeat Simple_repeat 1 40 0 754 160 8 0 chr18 13983259 13983378 -72005556 + AluJb SINE Alu 2 121 -191 336 48 0 0 chr18 13983378 13983420 -72005514 + (TAAAA)n Simple_repeat Simple_repeat 2 43 0 28 71 0 0 chr18 13983725 13983781 -72005153 + AT_rich Low_complexity Low_complexity 1 56 0 1261 164 32 0 chr18 13984534 13984753 -72004181 + AluJb SINE Alu 85 310 -2 325 254 107 28 chr18 13984834 13985011 -72003923 + L1MC5 LINE L1 7000 7190 -771 479 263 81 87 chr18 13985092 13985830 -72003104 + L1MC5 LINE L1 7295 8013 -29 3961 159 20 31 chr18 13985928 13986658 -72002276 - MER50 LTR ERV1 -12 722 1 222 105 0 0 chr18 13987084 13987122 -72001812 + (CA)n Simple_repeat Simple_repeat 1 38 0 927 290 83 0 chr18 13987582 13987882 -72001052 - MER58B DNA MER1_type -8 333 9 330 205 0 0 chr18 13988284 13988367 -72000567 + A-rich Low_complexity Low_complexity 1 83 0 360 311 143 0 chr18 13988575 13988868 -72000066 - L1ME4a LINE L1 -22 6099 5765 1866 132 14 30 chr18 13990145 13990440 -71998494 + AluSx SINE Alu 1 290 -22 430 306 18 35 chr18 13992347 13992517 -71996417 + MIR SINE MIR 12 178 -84 1900 123 141 25 chr18 13993082 13993408 -71995526 + THE1B LTR MaLR 1 364 0 23 0 0 0 chr18 13993998 13994021 -71994913 + AT_rich Low_complexity Low_complexity 1 23 0 2277 108 0 0 chr18 13994776 13995081 -71993853 - AluSx SINE Alu -6 306 2 211 322 87 26 chr18 13996363 13996478 -71992456 - L2 LINE L2 -5 3267 3146 4872 153 21 12 chr18 13997689 13998584 -71990350 - L1 LINE L1 -1293 4853 3951 219 103 0 0 chr18 13999688 13999727 -71989207 + (A)n Simple_repeat Simple_repeat 1 39 0 6190 182 159 56 chr18 14000832 14001919 -71987015 + L1MC3 LINE L1 5849 6822 -963 273 236 28 14 chr18 14001919 14001991 -71986943 + MLT1F1 LTR MaLR 61 133 -434 2299 123 0 0 chr18 14001993 14002301 -71986633 + AluSx SINE Alu 1 308 -4 6190 182 159 56 chr18 14002301 14002680 -71986254 + L1MC3 LINE L1 6822 7160 -625 2270 110 0 0 chr18 14002680 14002980 -71985954 + AluSx SINE Alu 1 300 -12 6190 182 159 56 chr18 14002980 14003180 -71985754 + L1MC3 LINE L1 7160 7770 -15 430 281 109 59 chr18 14003762 14003852 -71985082 - MIR SINE MIR -12 250 166 2431 67 0 3 chr18 14003852 14004151 -71984783 - AluY SINE Alu -13 298 1 430 281 109 59 chr18 14004151 14004209 -71984725 - MIR SINE MIR -96 166 112 1944 138 7 3 chr18 14004209 14004521 -71984413 - AluSx SINE Alu 0 313 1 430 281 109 59 chr18 14004521 14004591 -71984343 - MIR SINE MIR -150 112 19 181 317 89 40 chr18 14004915 14005016 -71983918 + L2 LINE L2 3167 3272 0 615 171 16 8 chr18 14005816 14005939 -71982995 - L1MA10 LINE L1 0 6334 6211 2988 136 0 20 chr18 14005939 14006380 -71982554 - MSTB1 LTR MaLR 0 432 1 377 93 0 0 chr18 14006402 14006456 -71982478 - MADE1 DNA Mariner 0 80 27 1962 116 46 3 chr18 14006490 14006775 -71982159 - AluSc SINE Alu -11 298 2 2224 171 40 12 chr18 14006803 14007230 -71981704 - L1MEc LINE L1 -4480 1904 1466 616 241 37 148 chr18 14007220 14007572 -71981362 - L1MEc LINE L1 -6049 514 202 * 6722 121 35 8 chr18 14008260 14009583 -71979351 + L1MA3 LINE L1 4946 6305 0 187 254 25 123 chr18 14009612 14009734 -71979200 - MER5B DNA MER1_type -68 110 1 1277 111 12 0 chr18 14009792 14009963 -71978971 + AluSq SINE Alu 1 173 -140 565 104 0 0 chr18 14009963 14010040 -71978894 + Alu SINE Alu 228 304 -7 342 237 11 32 chr18 14010219 14010312 -71978622 - MIR SINE MIR -108 154 64 259 314 36 51 chr18 14010550 14010687 -71978247 + MER5A DNA MER1_type 55 189 0 1208 161 69 0 chr18 14011797 14012014 -71976920 - L1MA3 LINE L1 0 6305 6074 611 246 156 15 chr18 14012014 14012213 -71976721 + MIR SINE MIR 34 260 -2 1890 192 18 0 chr18 14012674 14013013 -71975921 + MLT1A1 LTR MaLR 15 359 -6 2008 110 60 0 chr18 14013321 14013603 -71975331 - AluSx SINE Alu -13 299 1 243 326 110 76 chr18 14014930 14015365 -71973569 - L2 LINE L2 0 3272 2823 400 281 71 42 chr18 14015577 14015815 -71973119 - L2 LINE L2 -743 2571 2327 535 75 4 36 chr18 14016109 14016377 -71972557 + AluSg1 SINE Alu 1 311 0 188 226 29 108 chr18 14016921 14017023 -71971911 - L2 LINE L2 -241 3031 2938 225 314 14 0 chr18 14017759 14017829 -71971105 - MIR SINE MIR -91 171 101 456 158 48 20 chr18 14017951 14018097 -71970837 + GA-rich Low_complexity Low_complexity 4 153 0 213 284 78 52 chr18 14018109 14018225 -71970709 + MER5A DNA MER1_type 68 186 -3 215 289 123 70 chr18 14018524 14018638 -71970296 + L2 LINE L2 3146 3265 -7 396 169 0 0 chr18 14018713 14018790 -71970144 + C-rich Low_complexity Low_complexity 1 77 0 189 0 0 0 chr18 14022322 14022343 -71966591 + (TTCC)n Simple_repeat Simple_repeat 1 21 0 350 224 0 0 chr18 14022361 14022428 -71966506 - AluJ/FRAM SINE Alu -3 299 233 272 185 0 15 chr18 14022440 14022505 -71966429 + CT-rich Low_complexity Low_complexity 1 64 0 1781 155 44 0 chr18 14022505 14022776 -71966158 - AluSx SINE Alu -25 287 5 3039 163 19 23 chr18 14023384 14023911 -71965023 + Tigger7 DNA MER2_type 1 525 -208 512 198 11 0 chr18 14023905 14023996 -71964938 + Tigger7 DNA MER2_type 2396 2487 0 * 241 226 0 0 chr18 14025169 14025222 -71963712 + CT-rich Low_complexity Low_complexity 2 54 0 251 330 131 23 chr18 14027930 14028106 -71960828 + MIR SINE MIR 47 241 -21 2444 64 7 0 chr18 14030085 14030381 -71958553 - AluY SINE Alu -13 298 1 1983 143 17 0 chr18 14032419 14032712 -71956222 - AluSx SINE Alu -14 298 1 32 26 0 0 chr18 14032721 14032760 -71956174 + AT_rich Low_complexity Low_complexity 1 39 0 2293 101 0 3 chr18 14032938 14033234 -71955700 + AluSg SINE Alu 1 295 -15 22 0 0 0 chr18 14033274 14033296 -71955638 + AT_rich Low_complexity Low_complexity 1 22 0 32 57 0 0 chr18 14033814 14033867 -71955067 + AT_rich Low_complexity Low_complexity 1 53 0 306 149 48 19 chr18 14033907 14034119 -71954815 + (TA)n Simple_repeat Simple_repeat 1 218 0 442 99 41 41 chr18 14034119 14034290 -71954644 + (TTATA)n Simple_repeat Simple_repeat 1 171 0 715 281 167 57 chr18 14036827 14038134 -71950800 + L2 LINE L2 1828 3305 -8 203 352 34 0 chr18 14039173 14039261 -71949673 + MIR SINE MIR 154 244 -18 23 54 0 0 chr18 14039831 14039868 -71949066 + AT_rich Low_complexity Low_complexity 1 37 0 1965 137 0 23 chr18 14039870 14040170 -71948764 + AluSx SINE Alu 1 293 -19 495 48 0 0 chr18 14040170 14040232 -71948702 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 1560 176 13 33 chr18 14040326 14040627 -71948307 - AluJo SINE Alu -9 303 9 3136 206 48 43 chr18 14040727 14041140 -71947794 + Charlie1 DNA MER1_type 1924 2334 -427 2088 130 0 7 chr18 14041140 14041440 -71947494 - AluSx SINE Alu -13 299 2 3136 206 48 43 chr18 14041440 14041859 -71947075 + Charlie1 DNA MER1_type 2334 2760 -1 2561 68 0 0 chr18 14042013 14042324 -71946610 - AluY SINE Alu 0 311 1 279 320 110 36 chr18 14043265 14043484 -71945450 - L2 LINE L2 -423 2891 2657 2067 120 3 3 chr18 14044138 14044438 -71944496 - AluSx SINE Alu -12 300 1 500 319 48 10 chr18 14044561 14044768 -71944166 + Charlie8 DNA MER1_type 2 216 -2201 1068 270 138 34 chr18 14045866 14046337 -71942597 - MLT1E LTR MaLR -39 554 35 217 245 0 0 chr18 14046604 14046653 -71942281 + GA-rich Low_complexity Low_complexity 3 51 0 236 73 91 0 chr18 14046752 14046807 -71942127 + (ATATG)n Simple_repeat Simple_repeat 4 63 0 300 105 128 0 chr18 14046853 14046986 -71941948 + (ATATG)n Simple_repeat Simple_repeat 4 153 0 186 117 104 0 chr18 14047032 14047109 -71941825 + (ATATG)n Simple_repeat Simple_repeat 4 88 0 283 105 99 37 chr18 14047162 14047324 -71941610 + (ATATG)n Simple_repeat Simple_repeat 4 175 0 2450 60 0 20 chr18 14047744 14048046 -71940888 - AluY SINE Alu -15 296 1 818 0 21 0 chr18 14048717 14048814 -71940120 + (TAAAA)n Simple_repeat Simple_repeat 4 102 0 2381 67 0 14 chr18 14050858 14051155 -71937779 - AluY SINE Alu -18 293 1 3720 175 24 18 chr18 14051155 14051868 -71937066 + L1MB8 LINE L1 5461 6177 -1 2174 119 0 7 chr18 14051880 14052174 -71936760 + AluSq SINE Alu 1 292 -21 2286 84 3 0 chr18 14053125 14053423 -71935511 + AluY SINE Alu 1 299 -12 228 299 78 13 chr18 14053464 14053541 -71935393 - MIR SINE MIR -81 127 46 184 215 0 38 chr18 14054802 14054881 -71934053 + GA-rich Low_complexity Low_complexity 2 77 0 2233 91 0 7 chr18 14056730 14057015 -71931919 + AluSq SINE Alu 8 290 -23 234 297 0 0 chr18 14057015 14057089 -71931845 + (TATATG)n Simple_repeat Simple_repeat 1 74 0 228 343 78 18 chr18 14057420 14057586 -71931348 + L2 LINE L2 3136 3311 -2 361 267 87 35 chr18 14058146 14058318 -71930616 + MIR SINE MIR 22 202 -60 213 255 43 21 chr18 14058908 14059002 -71929932 + (TATATG)n Simple_repeat Simple_repeat 3 98 0 1722 196 0 10 chr18 14059577 14059883 -71929051 - AluJo SINE Alu -9 303 1 210 163 0 0 chr18 14060736 14060752 -71928182 + CT-rich Low_complexity Low_complexity 2 17 -27 2465 88 3 0 chr18 14060752 14061058 -71927876 - AluSc SINE Alu -1 308 2 210 163 0 0 chr18 14061058 14061084 -71927850 + CT-rich Low_complexity Low_complexity 16 44 0 193 337 47 12 chr18 14061094 14061180 -71927754 + L3 LINE CR1 1487 1575 -2 2628 43 0 0 chr18 14063321 14063624 -71925310 - AluY SINE Alu -8 303 1 1587 119 33 12 chr18 14063787 14064030 -71924904 + L1PA15 LINE L1 5912 6159 -6 3682 146 38 51 chr18 14064429 14064476 -71924458 - L1MB2 LINE L1 -4 6167 6121 2174 82 14 3 chr18 14064476 14064768 -71924166 - AluSg SINE Alu -13 297 3 3682 146 38 51 chr18 14064768 14065451 -71923483 - L1MB2 LINE L1 -50 6121 5446 2320 82 0 7 chr18 14065463 14065756 -71923178 - AluY SINE Alu -16 295 5 472 264 69 29 chr18 14066778 14066952 -71921982 + MIR SINE MIR 11 191 -71 250 279 52 78 chr18 14068440 14068594 -71920340 + MIR SINE MIR 110 259 -3 2124 127 0 3 chr18 14069615 14069915 -71919019 + AluSx SINE Alu 3 301 -11 318 26 0 0 chr18 14070976 14071015 -71917919 + (CA)n Simple_repeat Simple_repeat 2 40 0 1275 83 0 0 chr18 14071600 14071756 -71917178 + AluY SINE Alu 127 282 -29 317 292 4 47 chr18 14072596 14072952 -71915982 + CT-rich Low_complexity Low_complexity 1 340 0 184 158 35 0 chr18 14072972 14073029 -71915905 + CT-rich Low_complexity Low_complexity 2 60 0 357 242 8 63 chr18 14073091 14073453 -71915481 + CT-rich Low_complexity Low_complexity 1 341 0 218 139 0 82 chr18 14073503 14073625 -71915309 + (TCC)n Simple_repeat Simple_repeat 2 113 0 201 167 7 67 chr18 14073675 14073825 -71915109 + CT-rich Low_complexity Low_complexity 2 142 0 389 229 21 39 chr18 14073873 14074407 -71914527 + CT-rich Low_complexity Low_complexity 1 524 0 378 279 204 0 chr18 14075216 14075388 -71913546 - MIR SINE MIR -29 233 27 206 217 0 33 chr18 14077275 14077335 -71911599 + T-rich Low_complexity Low_complexity 3 60 0 207 0 0 0 chr18 14078921 14078944 -71909990 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 353 362 51 75 chr18 14078947 14079281 -71909653 - L2 LINE L2 -15 3257 2932 185 32 0 65 chr18 14080714 14080745 -71908189 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 26 23 0 23 chr18 14080745 14080756 -71908178 + AT_rich Low_complexity Low_complexity 1 11 -32 1534 147 60 56 chr18 14080756 14081041 -71907893 - AluJo SINE Alu -26 286 1 26 23 0 23 chr18 14081041 14081073 -71907861 + AT_rich Low_complexity Low_complexity 11 43 0 203 359 78 7 chr18 14082860 14083002 -71905932 + L2 LINE L2 1979 2130 -1184 1620 234 22 8 chr18 14083299 14083658 -71905276 - MLT1A1 LTR MaLR -1 364 1 649 313 190 38 chr18 14083838 14085165 -71903769 - L2 LINE L2 -421 2893 1365 378 338 49 20 chr18 14086311 14086515 -71902419 + MIR SINE MIR 40 249 -13 181 331 66 25 chr18 14086583 14086704 -71902230 - MIR3 SINE MIR -78 130 5 279 0 0 0 chr18 14087389 14087420 -71901514 + (CA)n Simple_repeat Simple_repeat 2 32 0 2428 35 0 7 chr18 14088028 14088347 -71900587 - AluY SINE Alu 0 317 1 241 125 36 0 chr18 14092812 14092868 -71896066 + (TTG)n Simple_repeat Simple_repeat 2 59 0 227 284 30 0 chr18 14095803 14095870 -71893064 - MER5A DNA MER1_type -80 109 41 185 173 67 133 chr18 14096388 14096463 -71892471 - L2 LINE L2 -2114 1200 1131 2498 53 3 0 chr18 14096471 14096770 -71892164 + AluY SINE Alu 1 300 -11 369 0 0 0 chr18 14099000 14099041 -71889893 + (TA)n Simple_repeat Simple_repeat 1 41 0 2412 65 0 0 chr18 14099193 14099487 -71889447 + AluY SINE Alu 1 294 -17 882 317 58 38 chr18 14099741 14100361 -71888573 + L1MC4a LINE L1 5257 5809 -353 2400 91 7 0 chr18 14100568 14100877 -71888057 - AluSx SINE Alu -1 311 1 24 0 0 0 chr18 14100996 14101020 -71887914 + GC_rich Low_complexity Low_complexity 1 24 0 249 240 0 0 chr18 14101034 14101084 -71887850 + A-rich Low_complexity Low_complexity 1 50 0 373 196 10 10 chr18 14101085 14101182 -71887752 + GA-rich Low_complexity Low_complexity 4 100 0 214 255 0 0 chr18 14101531 14101582 -71887352 + (TATG)n Simple_repeat Simple_repeat 2 52 0 25 0 0 0 chr18 14104347 14104372 -71884562 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr18 14105789 14105810 -71883124 + AT_rich Low_complexity Low_complexity 1 21 0 2055 124 7 16 chr18 14105991 14106298 -71882636 + AluSx SINE Alu 1 304 -8 201 39 0 0 chr18 14106925 14106951 -71881983 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2101 149 0 0 chr18 14107709 14108018 -71880916 + AluSx SINE Alu 1 309 -3 2775 103 3 19 chr18 14109171 14109541 -71879393 - THE1B LTR MaLR 0 364 1 187 224 155 0 chr18 14110595 14110653 -71878281 - L2 LINE L2 0 3272 3206 1525 134 42 0 chr18 14111201 14111418 -71877516 - MER30 DNA MER1_type 0 230 5 201 316 41 61 chr18 14111680 14111778 -71877156 + L2 LINE L2 2949 3044 -228 184 239 51 137 chr18 14115644 14115761 -71873173 + MIR SINE MIR 30 136 -72 28 0 0 0 chr18 14117659 14117687 -71871247 + AT_rich Low_complexity Low_complexity 1 28 0 1150 72 0 0 chr18 14117687 14117825 -71871109 - AluY SINE Alu -25 286 149 1810 71 0 4 chr18 14117825 14118050 -71870884 - AluY SINE Alu -87 224 1 253 340 43 7 chr18 14120348 14120489 -71868445 - MIR SINE MIR -6 256 111 196 312 191 0 chr18 14122949 14123090 -71865844 + L2 LINE L2 2306 2473 -841 264 276 0 35 chr18 14124650 14124737 -71864197 + GA-rich Low_complexity Low_complexity 4 87 0 863 298 40 60 chr18 14125851 14126251 -71862683 + MLT1I LTR MaLR 15 406 -3 1235 194 61 67 chr18 14126424 14126448 -71862486 - MLT1A2 LTR MaLR 0 374 351 2843 167 33 77 chr18 14126448 14127088 -71861846 + LTR9 LTR ERV1 1 612 0 1235 194 61 67 chr18 14127088 14127439 -71861495 - MLT1A2 LTR MaLR -23 351 1 2205 112 3 13 chr18 14127473 14127787 -71861147 + AluSx SINE Alu 1 311 -1 440 261 140 63 chr18 14127800 14128406 -71860528 + L1M4 LINE L1 3749 4401 -1745 366 267 19 50 chr18 14128614 14128854 -71860080 + L1MDb LINE L1 1130 1397 -4988 1389 132 0 5 chr18 14128872 14129085 -71859849 - L1P4 LINE L1 -566 5602 5391 180 77 0 0 chr18 14129094 14129120 -71859814 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 36083 60 12 4 chr18 14129120 14135209 -71853725 - L1PA5 LINE L1 -12 6142 4 9272 199 42 13 chr18 14135222 14136943 -71851991 - L1PA13 LINE L1 -3756 3041 1215 267 31 0 0 chr18 14136943 14136975 -71851959 + (CAG)n Simple_repeat Simple_repeat 1 32 0 9272 199 42 13 chr18 14136975 14137652 -71851282 - L1PA13 LINE L1 -5582 1215 559 2275 115 0 0 chr18 14137886 14138182 -71850752 + AluSx SINE Alu 1 296 -16 193 275 43 0 chr18 14139656 14139725 -71849209 - L2 LINE L2 -1 3312 3241 251 320 27 34 chr18 14139914 14140061 -71848873 - L2 LINE L2 -212 3060 2915 267 296 74 6 chr18 14141901 14142063 -71846871 + MIR SINE MIR 51 223 -39 2024 29 37 0 chr18 14142576 14142819 -71846115 - L1PA4 LINE L1 0 6155 5904 251 244 49 24 chr18 14143045 14143168 -71845766 + L1M4 LINE L1 3823 3948 -2198 1522 256 69 26 chr18 14143298 14143747 -71845187 - L1ME1 LINE L1 -7 6159 5674 5836 187 39 9 chr18 14143747 14144943 -71843991 + Tigger3b DNA MER2_type 1 1231 0 1522 256 69 26 chr18 14144943 14145114 -71843820 - L1ME1 LINE L1 -492 5674 5512 24 32 0 0 chr18 14145229 14145260 -71843674 + AT_rich Low_complexity Low_complexity 1 31 0 590 225 68 36 chr18 14146020 14146242 -71842692 - L1MB4 LINE L1 0 6180 5952 2561 254 45 40 chr18 14148594 14149111 -71839823 - L1MB4 LINE L1 -192 5988 5475 2406 80 0 10 chr18 14149111 14149412 -71839522 + AluY SINE Alu 1 298 -13 2135 117 10 0 chr18 14149421 14149712 -71839222 + AluSg SINE Alu 1 294 -16 2561 254 45 40 chr18 14149712 14150941 -71837993 - L1MB4 LINE L1 -712 5468 4223 247 270 22 11 chr18 14152033 14152122 -71836812 + MIR SINE MIR 23 112 -150 307 306 64 29 chr18 14152151 14152324 -71836610 - MIR SINE MIR -53 209 31 2124 111 27 0 chr18 14157037 14157335 -71831599 + AluSx SINE Alu 1 306 -6 196 352 0 45 chr18 14159078 14159166 -71829768 - MIR3 SINE MIR -6 202 119 2100 92 10 24 chr18 14159222 14159557 -71829377 - AluSc SINE Alu 0 331 1 946 291 144 17 chr18 14159960 14160545 -71828389 - L1ME3A LINE L1 -13 6157 5499 927 161 0 0 chr18 14160772 14160909 -71828025 + AluSx SINE Alu 1 137 -175 28 0 0 0 chr18 14161360 14161388 -71827546 + AT_rich Low_complexity Low_complexity 1 28 0 1126 145 6 12 chr18 14161617 14161789 -71827145 + AluSx SINE Alu 119 289 -21 253 245 136 65 chr18 14162024 14162179 -71826755 + L1MC/D LINE L1 5560 5725 -2083 225 268 18 0 chr18 14163586 14163642 -71825292 + (TCCA)n Simple_repeat Simple_repeat 4 60 0 189 0 0 0 chr18 14165284 14165305 -71823629 + (GA)n Simple_repeat Simple_repeat 2 22 0 423 250 24 49 chr18 14165964 14166128 -71822806 - L1ME3A LINE L1 -15 6155 5996 329 305 9 9 chr18 14167430 14167535 -71821399 + MIR SINE MIR 6 110 -152 21 0 0 0 chr18 14167928 14167949 -71820985 + AT_rich Low_complexity Low_complexity 1 21 0 199 286 0 0 chr18 14168482 14168538 -71820396 - MIR3 SINE MIR 0 208 153 390 263 125 71 chr18 14168838 14168901 -71820033 + L1ME LINE L1 5410 5468 -653 1311 162 8 17 chr18 14168901 14169136 -71819798 + MER46A DNA MER2_type 1 233 -3 390 263 125 71 chr18 14169136 14169464 -71819470 + L1ME LINE L1 5468 5822 -299 2512 59 0 10 chr18 14169954 14170260 -71818674 - AluY SINE Alu -8 303 1 303 301 35 27 chr18 14170796 14171052 -71817882 - L1M4 LINE L1 -2636 3510 3253 1765 141 0 28 chr18 14171215 14171499 -71817435 - AluSx SINE Alu -2 310 35 793 271 142 12 chr18 14171671 14172073 -71816861 - L1ME3A LINE L1 -2100 5708 5255 251 0 59 0 chr18 14172096 14172130 -71816804 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 31 44 0 0 chr18 14172178 14172223 -71816711 + AT_rich Low_complexity Low_complexity 1 45 0 21 36 0 0 chr18 14173062 14173090 -71815844 + AT_rich Low_complexity Low_complexity 1 28 0 431 172 41 33 chr18 14173125 14173247 -71815687 - L1MB8 LINE L1 0 6178 6056 2339 105 0 3 chr18 14173459 14173764 -71815170 + AluSp SINE Alu 1 304 -9 557 316 71 35 chr18 14173957 14174505 -71814429 - L1MC4a LINE L1 -1927 5881 5314 27 0 0 0 chr18 14175033 14175060 -71813874 + AT_rich Low_complexity Low_complexity 1 27 0 336 48 0 0 chr18 14175242 14175284 -71813650 + (TG)n Simple_repeat Simple_repeat 2 43 0 1261 120 0 42 chr18 14176005 14176197 -71812737 - AluSx SINE Alu -94 218 35 729 271 153 13 chr18 14176369 14176767 -71812167 - L1MB8 LINE L1 -2100 5708 5255 223 174 0 83 chr18 14177541 14177662 -71811272 + (CCCCG)n Simple_repeat Simple_repeat 4 114 0 449 246 116 53 chr18 14178051 14178356 -71810578 + L1ME2 LINE L1 5336 5661 -501 2077 175 82 35 chr18 14178417 14178879 -71810055 - LTR2B LTR ERV1 0 490 7 504 275 127 4 chr18 14179055 14179284 -71809650 + L1ME2 LINE L1 5887 6143 -21 236 279 88 27 chr18 14179364 14179511 -71809423 + L1M4 LINE L1 3551 3706 -2440 236 200 129 0 chr18 14179873 14179943 -71808991 - Charlie5 DNA MER1_type -2497 115 37 322 170 19 0 chr18 14180685 14180738 -71808196 + MLT-int LTR MaLR 448 501 -1234 2036 188 58 31 chr18 14181013 14181460 -71807474 + LTR2B LTR ERV1 32 490 0 7370 73 73 16 chr18 14181460 14182511 -71806423 + Harlequin LTR ERV1 1 1111 -5785 * 24708 62 6 4 chr18 14182497 14184621 -71804313 + Harlequin LTR ERV1 2053 4188 -2708 212 0 36 0 chr18 14184621 14184649 -71804285 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 24708 62 6 4 chr18 14184649 14185591 -71803343 + Harlequin LTR ERV1 4188 5126 -1770 1723 196 23 12 chr18 14185593 14185935 -71802999 - Tigger3(Golem) DNA MER2_type -2683 346 1 3028 193 38 33 chr18 14185987 14186469 -71802465 - MER82 DNA MER2_type 0 653 165 1929 105 0 14 chr18 14186469 14186784 -71802150 + AluSx SINE Alu 1 311 0 3028 193 38 33 chr18 14186784 14186939 -71801995 - MER82 DNA MER2_type -488 165 12 251 231 15 62 chr18 14186948 14187013 -71801921 + L2 LINE L2 3201 3262 -10 1303 97 0 0 chr18 14187095 14187270 -71801664 - AluSg/x SINE Alu -8 302 128 257 272 33 0 chr18 14187517 14187609 -71801325 - Charlie2 DNA MER1_type 0 2862 2768 595 162 110 32 chr18 14187609 14187803 -71801131 - AluJo/FRAM SINE Alu 0 302 137 1228 158 0 32 chr18 14187806 14188027 -71800907 - AluJb SINE Alu -20 292 79 2338 89 0 0 chr18 14188653 14188955 -71799979 + AluSx SINE Alu 1 302 -10 782 196 0 0 chr18 14189288 14189421 -71799513 + FLAM_C SINE Alu 1 133 0 403 298 18 9 chr18 14189933 14190047 -71798887 - MIR SINE MIR 0 262 148 345 140 0 0 chr18 14190288 14190345 -71798589 + (TC)n Simple_repeat Simple_repeat 1 57 0 1011 146 0 36 chr18 14190345 14190557 -71798377 - AluJb SINE Alu -37 275 1 1871 167 10 74 chr18 14190692 14191082 -71797852 - MLT1A1 LTR MaLR 0 365 1 823 158 68 0 chr18 14192123 14192269 -71796665 - AluJb SINE Alu -23 289 134 2261 90 0 7 chr18 14192269 14192579 -71796355 - AluY SINE Alu -3 308 1 1907 136 7 3 chr18 14192581 14192875 -71796059 - AluSx SINE Alu -17 295 1 300 203 0 0 chr18 14192878 14192937 -71795997 + MLT1E1 LTR MaLR 596 654 0 1316 158 95 0 chr18 14193227 14193468 -71795466 + AluJb SINE Alu 11 274 -38 1588 158 28 32 chr18 14193472 14193802 -71795132 - AluSx SINE Alu 0 329 1 1698 155 7 0 chr18 14193805 14194089 -71794845 - AluSx SINE Alu -15 297 12 459 260 0 0 chr18 14194424 14194524 -71794410 + FLAM_A SINE Alu 1 100 -42 1628 148 17 10 chr18 14194550 14194841 -71794093 + AluSx SINE Alu 1 293 -19 22 35 0 0 chr18 14196147 14196176 -71792758 + AT_rich Low_complexity Low_complexity 1 29 0 232 265 0 0 chr18 14196577 14196626 -71792308 + (TATG)n Simple_repeat Simple_repeat 1 49 0 216 188 21 42 chr18 14198725 14198773 -71790161 - L2 LINE L2 -3 3310 3264 216 0 0 0 chr18 14198947 14198971 -71789963 + (CA)n Simple_repeat Simple_repeat 1 24 0 2000 95 0 52 chr18 14199864 14200190 -71788744 + AluSx SINE Alu 1 309 -3 305 123 70 18 chr18 14200279 14200336 -71788598 + L2 LINE L2 3254 3313 0 637 164 7 7 chr18 14202008 14202154 -71786780 + CT-rich Low_complexity Low_complexity 4 149 0 1206 81 0 0 chr18 14202159 14202331 -71786603 + (TTCC)n Simple_repeat Simple_repeat 3 174 0 317 325 60 20 chr18 14202484 14202635 -71786299 + L2 LINE L2 2607 2763 -551 390 21 0 0 chr18 14203942 14203989 -71784945 + (CA)n Simple_repeat Simple_repeat 2 48 0 1857 148 7 0 chr18 14204053 14204351 -71784583 - AluJo SINE Alu -12 300 1 328 303 10 0 chr18 14204650 14204749 -71784185 - MIR SINE MIR -88 174 75 1477 241 50 97 chr18 14204752 14205508 -71783426 + HsTC2 DNA Tc2 4 1894 -4 22 35 0 0 chr18 14206969 14206998 -71781936 + AT_rich Low_complexity Low_complexity 1 29 0 187 338 42 14 chr18 14207008 14207079 -71781855 + L2 LINE L2 3190 3262 -10 319 284 15 44 chr18 14207809 14207922 -71781012 + MIR SINE MIR 45 162 -46 590 307 139 44 chr18 14209119 14209859 -71779075 - L2 LINE L2 -5 3308 2493 949 255 53 3 chr18 14210827 14211075 -71777859 + MIR SINE MIR 2 252 -10 263 293 173 33 chr18 14211876 14212026 -71776908 + MIR3 SINE MIR 38 208 0 2153 80 13 7 chr18 14213555 14213855 -71775079 - AluSq SINE Alu -11 302 1 309 288 68 17 chr18 14214596 14214714 -71774220 + MIR SINE MIR 61 184 -78 343 229 0 83 chr18 14215021 14215117 -71773817 + L1MC4a LINE L1 5858 5945 -1863 1315 208 54 40 chr18 14218015 14218366 -71770568 - MLT1A1 LTR MaLR 0 365 10 203 218 115 26 chr18 14219277 14219355 -71769579 + MIR SINE MIR 58 142 -120 1570 118 0 111 chr18 14220238 14220544 -71768390 + AluJb SINE Alu 29 300 -12 26 0 0 0 chr18 14220562 14220588 -71768346 + AT_rich Low_complexity Low_complexity 1 26 0 3253 177 69 26 chr18 14220593 14221321 -71767613 + L1MB2 LINE L1 5413 6171 0 388 285 62 14 chr18 14222670 14222814 -71766120 - MIR SINE MIR -74 188 38 4115 144 54 8 chr18 14224048 14224597 -71764337 - L1MB3 LINE L1 -3 6180 5589 264 77 0 0 chr18 14224597 14224636 -71764298 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4115 144 54 8 chr18 14224636 14224808 -71764126 - L1MB3 LINE L1 -594 5589 5426 1794 157 0 7 chr18 14225701 14226000 -71762934 + AluJo SINE Alu 1 297 -15 2212 89 3 0 chr18 14229052 14229345 -71759589 + AluY SINE Alu 1 294 -17 261 282 13 0 chr18 14229673 14229751 -71759183 + (TA)n Simple_repeat Simple_repeat 1 79 0 382 278 117 35 chr18 14234106 14234451 -71754483 + LTR33 LTR ERVL 8 456 -65 5022 159 41 2 chr18 14235049 14235983 -71752951 - L1MB1 LINE L1 0 6168 5191 4080 197 22 27 chr18 14235981 14236936 -71751998 + L1 LINE L1 4414 5363 -783 * 363 289 47 16 chr18 14237954 14238082 -71750852 + MIR SINE MIR 13 144 -118 437 273 180 0 chr18 14238199 14238338 -71750596 + MER5A DNA MER1_type 4 167 -22 35 71 0 0 chr18 14238478 14238548 -71750386 + AT_rich Low_complexity Low_complexity 1 70 0 11627 211 57 46 chr18 14239385 14240348 -71748586 - L1MB5 LINE L1 -3 6669 5719 1535 154 13 64 chr18 14240348 14240660 -71748274 - AluJb SINE Alu -16 296 1 11627 211 57 46 chr18 14240660 14244667 -71744267 - L1MB5 LINE L1 -953 5719 1759 2091 116 44 0 chr18 14244667 14244961 -71743973 - AluSq SINE Alu -6 307 1 11627 211 57 46 chr18 14244961 14245058 -71743876 - L1MB5 LINE L1 -4913 1759 1665 7960 87 6 152 chr18 14245058 14246620 -71742314 - SVA Other Other 0 1386 53 11627 211 57 46 chr18 14246620 14248129 -71740805 - L1MB5 LINE L1 -5007 1665 5 1542 141 121 20 chr18 14248831 14249186 -71739748 + MSTB1 LTR MaLR 1 432 0 280 367 51 19 chr18 14249371 14249529 -71739405 - L3 LINE CR1 -27 1550 1388 569 157 5 38 chr18 14252003 14252188 -71736746 + (TG)n Simple_repeat Simple_repeat 2 180 0 1953 163 3 6 chr18 14252857 14253338 -71735596 + AluJo SINE Alu 1 480 0 296 313 26 17 chr18 14253490 14253605 -71735329 + L2 LINE L2 3137 3252 -20 22 56 0 0 chr18 14254330 14254366 -71734568 + AT_rich Low_complexity Low_complexity 1 36 0 190 324 28 41 chr18 14255689 14255834 -71733100 - L2 LINE L2 -607 2707 2565 864 233 235 25 chr18 14256580 14257052 -71731882 - MLT1G LTR MaLR -8 582 12 248 281 0 0 chr18 14257060 14257117 -71731817 - MIR SINE MIR -106 156 100 256 290 122 0 chr18 14258685 14258792 -71730142 + L2 LINE L2 3150 3269 -3 567 253 30 48 chr18 14259872 14260038 -71728896 + MIR SINE MIR 11 173 -89 1797 182 0 22 chr18 14260458 14260777 -71728157 + AluJo SINE Alu 1 312 0 842 248 69 31 chr18 14260969 14261288 -71727646 - L2 LINE L2 -713 2601 2271 3111 191 40 13 chr18 14262598 14263225 -71725709 - LTR9B LTR ERV1 0 644 1 314 361 23 15 chr18 14263288 14263421 -71725513 + L2 LINE L2 3139 3272 0 709 259 109 16 chr18 14263593 14263826 -71725108 + MLT1H LTR MaLR 1 297 -252 1649 268 154 17 chr18 14263867 14264621 -71724313 - L2 LINE L2 -1788 1526 670 360 187 149 19 chr18 14264936 14265043 -71723891 + L2 LINE L2 3193 3313 0 560 167 174 14 chr18 14265690 14265834 -71723100 - MER20 DNA MER1_type -52 167 1 206 269 67 58 chr18 14265919 14266023 -71722911 + L2 LINE L2 3163 3267 -5 2620 42 3 0 chr18 14266127 14266437 -71722497 + AluY SINE Alu 1 311 0 271 327 65 48 chr18 14266448 14266616 -71722318 - MIR SINE MIR -40 222 52 2335 106 0 0 chr18 14267124 14267436 -71721498 + AluSx SINE Alu 1 312 0 279 287 147 31 chr18 14267476 14267605 -71721329 - L2 LINE L2 -4 3268 3125 186 278 153 85 chr18 14267746 14268099 -71720835 - L2 LINE L2 -676 2638 2262 2079 135 3 0 chr18 14268692 14268988 -71719946 + AluSx SINE Alu 1 297 -15 257 278 31 41 chr18 14269246 14269343 -71719591 - L2 LINE L2 -1344 1970 1875 243 0 0 0 chr18 14269409 14269436 -71719498 + (T)n Simple_repeat Simple_repeat 1 27 0 453 243 65 0 chr18 14269665 14269772 -71719162 - MER5A DNA MER1_type -74 115 2 231 235 0 0 chr18 14270330 14270381 -71718553 + MER113 DNA MER1_type? 7 57 -464 1737 120 0 8 chr18 14273126 14273392 -71715542 + AluSx SINE Alu 45 308 0 28 0 0 0 chr18 14274046 14274074 -71714860 + AT_rich Low_complexity Low_complexity 1 28 0 357 259 79 60 chr18 14274559 14274698 -71714236 + L1ME LINE L1 5599 5745 -376 2278 98 0 0 chr18 14274698 14274983 -71713951 + AluSx SINE Alu 1 285 -27 357 259 79 60 chr18 14274983 14275059 -71713875 + L1ME LINE L1 5745 5818 -303 2268 153 26 75 chr18 14276074 14276176 -71712758 - Tigger2a DNA MER2_type -2274 434 329 2016 127 0 7 chr18 14276176 14276467 -71712467 - AluJo SINE Alu -12 300 12 2268 153 26 75 chr18 14276467 14276820 -71712114 - Tigger2a DNA MER2_type -2379 329 1 491 240 149 97 chr18 14277416 14277737 -71711197 - MER102b DNA MER1_type -3 338 1 383 52 123 0 chr18 14278018 14278091 -71710843 - L1P LINE L1 -803 5348 5267 6244 72 17 19 chr18 14278091 14278899 -71710035 + L1PA8 LINE L1 5352 6158 -14 23 0 0 0 chr18 14281545 14281568 -71707366 + AT_rich Low_complexity Low_complexity 1 23 0 1593 112 31 5 chr18 14282120 14282343 -71706591 + AluSx SINE Alu 1 229 -83 203 254 70 70 chr18 14282604 14282718 -71706216 + L3 LINE CR1 603 716 -861 1449 196 115 75 chr18 14283409 14284007 -71704927 - MLT1E3 LTR MaLR 0 624 3 197 33 33 0 chr18 14284183 14284213 -71704721 + (TG)n Simple_repeat Simple_repeat 2 32 0 2449 91 0 0 chr18 14284247 14284554 -71704380 + AluSx SINE Alu 1 307 -5 315 204 67 158 chr18 14285762 14286047 -71702887 + L1ME LINE L1 22 280 -5790 286 303 162 11 chr18 14286137 14286322 -71702612 + L1ME LINE L1 237 449 -5621 620 266 90 55 chr18 14286408 14286953 -71701981 + L1ME LINE L1 453 1010 -5073 305 235 12 12 chr18 14287225 14287306 -71701628 + MER5A DNA MER1_type 10 90 -99 882 198 68 0 chr18 14287942 14288134 -71700800 - MER20 DNA MER1_type -7 212 8 331 318 62 17 chr18 14288707 14288886 -71700048 + MIR SINE MIR 76 262 0 32 43 0 0 chr18 14289046 14289092 -71699842 + AT_rich Low_complexity Low_complexity 1 46 0 391 98 0 0 chr18 14290190 14290285 -71698649 - AluJ/FRAM SINE Alu 0 321 227 767 197 0 0 chr18 14290316 14290453 -71698481 - FLAM_C SINE Alu -5 138 2 502 216 112 0 chr18 14293895 14294011 -71694923 - MLT1I LTR MaLR -7 402 274 193 220 40 0 chr18 14294402 14294452 -71694482 - MIR SINE MIR -113 149 98 252 270 63 24 chr18 14295625 14295751 -71693183 + MIR SINE MIR 105 235 -27 2123 110 10 3 chr18 14295757 14296048 -71692886 + AluSg SINE Alu 1 293 -17 272 322 132 4 chr18 14296065 14296292 -71692642 + L2 LINE L2 3042 3297 -16 351 222 56 4 chr18 14298186 14298341 -71690593 - MER45C DNA AcHobo -3 950 737 242 245 176 0 chr18 14298339 14298441 -71690493 - MER45C DNA AcHobo -537 416 297 * 534 215 163 0 chr18 14298490 14298625 -71690309 - MER45C DNA AcHobo -788 165 9 319 281 43 37 chr18 14300221 14300385 -71688549 - MER20B DNA MER1_type -616 167 3 805 202 64 35 chr18 14300469 14300672 -71688262 - MER3 DNA MER1_type 0 209 1 2518 69 0 3 chr18 14301145 14301449 -71687485 + AluY SINE Alu 1 303 -8 287 243 112 0 chr18 14301864 14301971 -71686963 - MER103 DNA DNA -19 147 29 511 269 74 14 chr18 14302794 14303010 -71685924 + MIR SINE MIR 2 230 -32 486 307 0 7 chr18 14305599 14305739 -71683195 - MIR SINE MIR -10 252 114 1588 172 25 53 chr18 14306173 14306529 -71682405 - AluJb SINE Alu 0 347 1 2102 112 0 11 chr18 14307110 14307436 -71681498 + AluSx SINE Alu 1 323 0 1997 162 3 0 chr18 14307588 14307884 -71681050 + AluSx SINE Alu 1 297 -15 998 248 85 27 chr18 14308530 14308891 -71680043 - MLT1C LTR MaLR -126 379 1 3126 75 16 2 chr18 14309041 14309465 -71679469 - L1PA13 LINE L1 -8 6155 5726 297 180 0 0 chr18 14309465 14309515 -71679419 + L1PA15-16 LINE L1 2473 2522 -4327 2437 213 77 20 chr18 14309515 14309947 -71678987 + MER69 DNA AcHobo 1839 2245 -281 1726 173 7 16 chr18 14309947 14310254 -71678680 + AluJo SINE Alu 1 304 -8 2437 213 77 20 chr18 14310254 14310382 -71678552 + MER69 DNA AcHobo 2245 2364 -162 2486 85 0 0 chr18 14310382 14310689 -71678245 - AluSc SINE Alu -2 307 1 2437 213 77 20 chr18 14310689 14310776 -71678158 + MER69 DNA AcHobo 2364 2524 -2 183 100 0 0 chr18 14311905 14311935 -71676999 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 37859 34 26 1 chr18 14311935 14317339 -71671595 - L1PA2 LINE L1 -24 6131 592 2621 64 0 3 chr18 14317440 14317805 -71671129 - AluY SINE Alu 0 364 1 2006 143 14 3 chr18 14317807 14318101 -71670833 - AluSx SINE Alu -15 297 1 324 281 144 59 chr18 14319870 14320176 -71668758 - L2 LINE L2 -10 3262 2931 1746 85 0 16 chr18 14320453 14320700 -71668234 - L1PA11 LINE L1 0 6174 5932 293 304 27 27 chr18 14320722 14320834 -71668100 + L2 LINE L2 3138 3249 -23 913 247 107 47 chr18 14320857 14321306 -71667628 + MLT1H LTR MaLR 15 490 -59 321 68 0 0 chr18 14321306 14321350 -71667584 + (TTTTA)n Simple_repeat Simple_repeat 1 44 0 2839 81 0 0 chr18 14321350 14321719 -71667215 - L1PA8 LINE L1 -24 6148 5780 288 209 30 0 chr18 14321719 14321786 -71667148 + MLT1H LTR MaLR 482 550 -5 468 323 36 40 chr18 14321874 14322150 -71666784 - L3 LINE CR1 -170 1407 1133 21 0 0 0 chr18 14324963 14324984 -71663950 + AT_rich Low_complexity Low_complexity 1 21 0 243 155 28 14 chr18 14325066 14325137 -71663797 + (TA)n Simple_repeat Simple_repeat 1 72 0 370 204 19 0 chr18 14325778 14325881 -71663053 + CT-rich Low_complexity Low_complexity 2 106 0 2118 218 49 64 chr18 14325916 14326692 -71662242 - L1M4 LINE L1 -1212 4934 4171 288 0 0 0 chr18 14326694 14326726 -71662208 + (TG)n Simple_repeat Simple_repeat 1 32 0 1729 130 29 25 chr18 14326726 14327002 -71661932 - AluSg SINE Alu -33 277 1 285 347 14 20 chr18 14327037 14327184 -71661750 + MIR3 SINE MIR 46 191 -17 51 42 0 0 chr18 14327487 14327559 -71661375 + AT_rich Low_complexity Low_complexity 1 72 0 418 229 86 82 chr18 14327630 14327875 -71661059 + MARNA DNA Mariner 138 383 -203 1864 180 0 13 chr18 14327887 14328198 -71660736 + AluJo SINE Alu 1 307 -5 377 317 45 32 chr18 14330132 14330353 -71658581 + MIR SINE MIR 8 231 -31 194 306 153 0 chr18 14330677 14330775 -71658159 + MIR3 SINE MIR 83 195 -13 2216 101 59 34 chr18 14332627 14332982 -71655952 + THE1B LTR MaLR 1 364 0 30 0 0 0 chr18 14333741 14333771 -71655163 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr18 14333855 14333884 -71655050 + AT_rich Low_complexity Low_complexity 1 29 0 224 233 0 0 chr18 14334376 14334419 -71654515 + (TATG)n Simple_repeat Simple_repeat 2 44 0 21 0 0 0 chr18 14334486 14334507 -71654427 + AT_rich Low_complexity Low_complexity 1 21 0 1577 174 14 7 chr18 14336192 14336467 -71652467 - AluJo SINE Alu -13 299 23 289 336 41 8 chr18 14337381 14337503 -71651431 + MIR SINE MIR 38 163 -99 2253 105 0 20 chr18 14338020 14338326 -71650608 - AluSq SINE Alu -13 300 1 204 40 0 0 chr18 14340292 14340317 -71648617 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 232 321 12 12 chr18 14343325 14343406 -71645528 + MIR SINE MIR 68 148 -60 244 284 15 0 chr18 14347223 14347290 -71641644 + MER117 DNA MER1_type 34 101 -96 731 277 17 35 chr18 14347334 14347565 -71641369 + MIR SINE MIR 1 227 -35 353 164 45 15 chr18 14349426 14349493 -71639441 + Tigger2 DNA MER2_type 1 69 -2649 * 1350 122 61 30 chr18 14349491 14349754 -71639180 + Tigger2 DNA MER2_type 2280 2550 -168 513 217 16 109 chr18 14350363 14350562 -71638372 + MIR SINE MIR 2 225 -33 393 291 60 0 chr18 14351005 14351122 -71637812 + MIR SINE MIR 30 153 -55 587 213 41 2 chr18 14351849 14352071 -71636863 + MER58B DNA MER1_type 42 308 -33 1451 130 142 8 chr18 14352074 14352370 -71636564 + AluJb SINE Alu 2 330 0 326 200 0 0 chr18 14352467 14352532 -71636402 + MER53 DNA DNA 6 70 -119 3270 158 34 19 chr18 14352555 14353139 -71635795 - L1PB4 LINE L1 -13 6143 5551 242 200 90 30 chr18 14353432 14353532 -71635402 - MER53 DNA DNA -58 131 26 288 154 0 0 chr18 14353541 14353593 -71635341 + (TA)n Simple_repeat Simple_repeat 2 53 0 223 177 48 0 chr18 14353617 14353679 -71635255 + (TA)n Simple_repeat Simple_repeat 1 65 0 1408 151 40 36 chr18 14356804 14357056 -71631878 - AluJo SINE Alu -13 299 47 285 260 110 27 chr18 14357850 14357970 -71630964 + MIR SINE MIR 32 166 -46 1047 194 47 30 chr18 14358164 14358396 -71630538 - MER106A DNA MER1_type 0 236 1 540 171 122 24 chr18 14358459 14358582 -71630352 - MIR SINE MIR -93 169 35 21008 34 3 2 chr18 14363791 14366967 -71621967 - L1PA2 LINE L1 0 6155 2978 1737 120 0 8 chr18 14369194 14369460 -71619474 + AluSx SINE Alu 45 308 0 28 0 0 0 chr18 14370114 14370142 -71618792 + AT_rich Low_complexity Low_complexity 1 28 0 357 259 79 60 chr18 14370627 14370766 -71618168 + L1ME LINE L1 5599 5745 -376 2301 95 0 0 chr18 14370766 14371051 -71617883 + AluSx SINE Alu 1 285 -27 357 259 79 60 chr18 14371051 14371127 -71617807 + L1ME LINE L1 5745 5818 -303 2286 151 26 75 chr18 14372142 14372244 -71616690 - Tigger2a DNA MER2_type -2274 434 329 1989 131 0 7 chr18 14372244 14372535 -71616399 - AluJo SINE Alu -12 300 12 2286 151 26 75 chr18 14372535 14372888 -71616046 - Tigger2a DNA MER2_type -2379 329 1 491 240 149 97 chr18 14373483 14373804 -71615130 - MER102b DNA MER1_type -3 338 1 383 52 123 0 chr18 14374085 14374158 -71614776 - L1P LINE L1 -803 5348 5267 6244 72 17 19 chr18 14374158 14374966 -71613968 + L1PA8 LINE L1 5352 6158 -14 23 0 0 0 chr18 14377613 14377636 -71611298 + AT_rich Low_complexity Low_complexity 1 23 0 1593 112 31 5 chr18 14378188 14378411 -71610523 + AluSx SINE Alu 1 229 -83 234 91 0 0 chr18 14378422 14378455 -71610479 + (A)n Simple_repeat Simple_repeat 1 33 0 203 254 70 70 chr18 14378673 14378787 -71610147 + L3 LINE CR1 603 716 -861 1624 201 115 75 chr18 14379478 14380076 -71608858 - MLT1E3 LTR MaLR 0 624 3 197 33 33 0 chr18 14380252 14380282 -71608652 + (TG)n Simple_repeat Simple_repeat 2 32 0 2394 94 0 0 chr18 14380316 14380623 -71608311 + AluSx SINE Alu 1 307 -5 316 204 67 158 chr18 14381831 14382116 -71606818 + L1ME LINE L1 22 280 -5790 281 308 162 11 chr18 14382206 14382391 -71606543 + L1ME LINE L1 237 449 -5621 652 264 95 72 chr18 14382477 14383022 -71605912 + L1ME LINE L1 453 1010 -5073 330 235 12 12 chr18 14383294 14383375 -71605559 + MER5A DNA MER1_type 10 90 -99 882 198 68 0 chr18 14384011 14384203 -71604731 - MER20 DNA MER1_type -7 212 8 343 313 62 17 chr18 14384776 14384955 -71603979 + MIR SINE MIR 76 262 0 32 43 0 0 chr18 14385115 14385161 -71603773 + AT_rich Low_complexity Low_complexity 1 46 0 391 98 0 0 chr18 14386259 14386354 -71602580 - AluJ/FRAM SINE Alu 0 321 227 767 197 0 0 chr18 14386385 14386522 -71602412 - FLAM_C SINE Alu -5 138 2 502 216 112 0 chr18 14389964 14390080 -71598854 - MLT1I LTR MaLR -7 402 274 193 220 40 0 chr18 14390471 14390521 -71598413 - MIR SINE MIR -113 149 98 236 278 63 24 chr18 14391694 14391820 -71597114 + MIR SINE MIR 105 235 -27 2154 113 3 3 chr18 14391826 14392119 -71596815 + AluSg SINE Alu 1 293 -17 272 322 132 4 chr18 14392136 14392363 -71596571 + L2 LINE L2 3042 3297 -16 362 191 355 0 chr18 14394256 14394411 -71594523 - MER45C DNA AcHobo -3 950 737 242 245 176 0 chr18 14394409 14394511 -71594423 - MER45C DNA AcHobo -537 416 297 * 534 215 163 0 chr18 14394560 14394695 -71594239 - MER45C DNA AcHobo -788 165 9 323 281 43 37 chr18 14396291 14396455 -71592479 - MER20B DNA MER1_type -616 167 3 859 178 74 40 chr18 14396539 14396741 -71592193 - MER3 DNA MER1_type 0 209 1 2527 69 0 3 chr18 14397214 14397519 -71591415 + AluY SINE Alu 1 304 -7 287 243 112 0 chr18 14397934 14398041 -71590893 - MER103 DNA DNA -19 147 29 511 269 74 14 chr18 14398864 14399080 -71589854 + MIR SINE MIR 2 230 -32 486 307 0 7 chr18 14401668 14401808 -71587126 - MIR SINE MIR -10 252 114 1513 172 28 53 chr18 14402243 14402586 -71586348 - AluJb SINE Alu 0 335 1 2102 112 0 11 chr18 14403161 14403489 -71585445 + AluSx SINE Alu 1 325 0 2012 159 3 0 chr18 14403635 14403931 -71585003 + AluSx SINE Alu 1 297 -15 998 248 85 27 chr18 14404577 14404938 -71583996 - MLT1C LTR MaLR -126 379 1 3112 78 16 2 chr18 14405088 14405512 -71583422 - L1PA13 LINE L1 -8 6155 5726 297 180 0 0 chr18 14405512 14405562 -71583372 + L1PA15-16 LINE L1 2473 2522 -4327 2450 208 75 28 chr18 14405562 14405994 -71582940 + MER69 DNA AcHobo 1839 2249 -277 1750 169 7 16 chr18 14405994 14406301 -71582633 + AluJo SINE Alu 1 304 -8 2450 208 75 28 chr18 14406301 14406435 -71582499 + MER69 DNA AcHobo 2249 2375 -151 2504 79 0 0 chr18 14406435 14406738 -71582196 - AluSc SINE Alu -6 303 1 2450 208 75 28 chr18 14406738 14406825 -71582109 + MER69 DNA AcHobo 2375 2524 -2 43590 32 23 0 chr18 14407955 14413965 -71574969 - L1PA2 LINE L1 0 6155 3 220 355 57 24 chr18 14414952 14415076 -71573858 - L2 LINE L2 -1 3271 3144 1516 146 52 24 chr18 14415343 14415699 -71573235 + LTR19A LTR ERV1 1 485 -1 1000 257 50 19 chr18 14415700 14416117 -71572817 + MLT1F LTR MaLR 17 542 0 2192 110 7 13 chr18 14416689 14416989 -71571945 + AluSq SINE Alu 1 298 -15 2131 120 40 0 chr18 14417220 14417521 -71571413 + AluSq SINE Alu 1 313 0 519 268 191 0 chr18 14418757 14419056 -71569878 - HAL1b LINE L1 -35 1313 958 825 64 0 3 chr18 14419198 14419416 -71569518 + AluY SINE Alu 17 291 -20 314 210 76 25 chr18 14419416 14419535 -71569399 - HAL1b LINE L1 -541 807 683 5255 138 25 5 chr18 14419542 14420436 -71568498 - L1MA4 LINE L1 0 6300 5389 1037 251 41 25 chr18 14420435 14420798 -71568136 - HAL1b LINE L1 -649 699 331 * 273 57 0 0 chr18 14420838 14420873 -71568061 + (TG)n Simple_repeat Simple_repeat 2 36 0 560 274 184 9 chr18 14420982 14421318 -71567616 - HAL1 LINE L1 -2 2505 2111 241 294 71 60 chr18 14421353 14421537 -71567397 + L2 LINE L2 3128 3313 0 1971 256 115 53 chr18 14421548 14422916 -71566018 - HAL1 LINE L1 -406 2101 650 2851 35 0 0 chr18 14423544 14423862 -71565072 - AluYb8 SINE Alu 0 318 1 21 0 0 0 chr18 14423976 14423997 -71564937 + AT_rich Low_complexity Low_complexity 1 21 0 2263 91 10 0 chr18 14424900 14425227 -71563707 - AluY SINE Alu 0 311 1 2006 143 14 3 chr18 14425229 14425523 -71563411 - AluSx SINE Alu -15 297 1 324 281 144 59 chr18 14427290 14427596 -71561338 - L2 LINE L2 -10 3262 2931 1716 77 8 28 chr18 14427873 14428121 -71560813 - L1PA11 LINE L1 0 6174 5932 355 279 25 25 chr18 14428143 14428265 -71560669 + L2 LINE L2 3138 3259 -13 934 245 107 47 chr18 14428272 14428721 -71560213 + MLT1H LTR MaLR 15 490 -59 321 68 0 0 chr18 14428721 14428765 -71560169 + (TTTTA)n Simple_repeat Simple_repeat 1 44 0 2740 89 0 3 chr18 14428765 14429135 -71559799 - L1PA8 LINE L1 -24 6148 5780 288 209 30 0 chr18 14429135 14429202 -71559732 + MLT1H LTR MaLR 482 550 -5 468 323 36 40 chr18 14429290 14429566 -71559368 - L3 LINE CR1 -170 1407 1133 21 0 0 0 chr18 14432378 14432399 -71556535 + AT_rich Low_complexity Low_complexity 1 21 0 243 155 28 14 chr18 14432481 14432552 -71556382 + (TA)n Simple_repeat Simple_repeat 1 72 0 370 204 19 0 chr18 14433192 14433295 -71555639 + CT-rich Low_complexity Low_complexity 2 106 0 2118 218 49 64 chr18 14433330 14434106 -71554828 - L1M4 LINE L1 -1212 4934 4171 288 0 0 0 chr18 14434108 14434140 -71554794 + (TG)n Simple_repeat Simple_repeat 1 32 0 1756 114 0 39 chr18 14434140 14434395 -71554539 - AluSx SINE Alu -33 279 35 691 279 153 13 chr18 14434567 14434965 -71553969 - L1MC/D LINE L1 -2100 5708 5255 817 119 0 0 chr18 14485746 14485864 -71503070 + AluSg/x SINE Alu 178 295 -17 1716 195 18 0 chr18 14486963 14487302 -71501632 + MLT1A1 LTR MaLR 15 359 -6 2006 110 60 0 chr18 14487610 14487892 -71501042 - AluSx SINE Alu -13 299 1 214 261 15 31 chr18 14488515 14488580 -71500354 - MIR SINE MIR -104 104 41 2272 108 0 0 chr18 14489809 14490114 -71498820 - AluSx SINE Alu -6 306 2 213 322 87 26 chr18 14491396 14491511 -71497423 - L2 LINE L2 -5 3267 3146 517 241 37 148 chr18 14493148 14493500 -71495434 + L1MEc LINE L1 202 514 -6049 * 2032 166 41 12 chr18 14493490 14493901 -71495033 + L1MEc LINE L1 1466 1888 -4496 1969 116 46 3 chr18 14493945 14494230 -71494704 + AluSc SINE Alu 2 298 -11 350 93 0 0 chr18 14494264 14494318 -71494616 + MADE1 DNA Mariner 27 80 0 2806 134 0 20 chr18 14494340 14494781 -71494153 + MSTB1 LTR MaLR 1 432 0 554 171 16 8 chr18 14494781 14494904 -71494030 + L1MA10 LINE L1 6211 6334 0 436 299 95 45 chr18 14496130 14496200 -71492734 + MIR SINE MIR 19 84 -178 1903 148 7 3 chr18 14496200 14496537 -71492397 + AluSx SINE Alu 1 338 0 436 299 95 45 chr18 14496537 14496595 -71492339 + MIR SINE MIR 84 138 -124 2411 70 0 3 chr18 14496595 14496896 -71492038 + AluY SINE Alu 1 300 -11 436 299 95 45 chr18 14496896 14496986 -71491948 + MIR SINE MIR 138 250 -12 219 220 150 50 chr18 14497178 14497278 -71491656 - MIR SINE MIR -14 248 139 484 264 69 29 chr18 14497942 14498116 -71490818 + MIR SINE MIR 11 191 -71 327 293 75 29 chr18 14499096 14499270 -71489664 + L1ME LINE L1 5574 5755 -366 389 231 213 0 chr18 14499676 14499784 -71489150 + MER5A DNA MER1_type 59 189 0 2335 84 7 0 chr18 14500297 14500594 -71488340 + AluY SINE Alu 1 299 -12 1351 298 109 43 chr18 14502414 14504004 -71484930 - L1MEc LINE L1 -4602 1794 100 332 265 68 8 chr18 14504780 14504897 -71484037 - MER5C DNA MER1_type -200 124 1 22 80 0 0 chr18 14505856 14505906 -71483028 + AT_rich Low_complexity Low_complexity 1 50 0 5410 185 159 56 chr18 14507318 14507518 -71481416 - L1MC3 LINE L1 -15 7770 7592 2270 110 0 0 chr18 14507518 14507818 -71481116 - AluSx SINE Alu -12 300 1 5410 185 159 56 chr18 14507818 14508197 -71480737 - L1MC3 LINE L1 -193 7592 7253 2333 120 0 0 chr18 14508197 14508506 -71480428 - AluSx SINE Alu -3 309 1 245 236 28 14 chr18 14508508 14508580 -71480354 - MLT1F1 LTR MaLR -434 133 61 5410 185 159 56 chr18 14508580 14509668 -71479266 - L1MC3 LINE L1 -532 7253 5849 206 258 15 0 chr18 14509684 14509750 -71479184 + (TA)n Simple_repeat Simple_repeat 1 67 0 237 33 0 0 chr18 14510774 14510804 -71478130 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 6374 166 35 10 chr18 14511909 14514203 -71474731 + L1MA3 LINE L1 3951 6305 0 188 254 25 123 chr18 14514232 14514354 -71474580 - MER5B DNA MER1_type -68 110 1 1280 111 12 0 chr18 14514412 14514583 -71474351 + AluSq SINE Alu 1 173 -140 529 104 0 0 chr18 14514583 14514660 -71474274 + Alu SINE Alu 229 305 -7 353 262 10 29 chr18 14514839 14514942 -71473992 - MIR SINE MIR -108 154 54 262 314 36 51 chr18 14515170 14515307 -71473627 + MER5A DNA MER1_type 55 189 0 1091 161 69 0 chr18 14516417 14516634 -71472300 - L1MA3 LINE L1 0 6305 6074 619 246 156 15 chr18 14516634 14516833 -71472101 + MIR SINE MIR 34 260 -2 23 0 0 0 chr18 14517578 14517601 -71471333 + AT_rich Low_complexity Low_complexity 1 23 0 1799 117 141 25 chr18 14518191 14518517 -71470417 - THE1B LTR MaLR 0 364 1 427 306 18 35 chr18 14519082 14519252 -71469682 - MIR SINE MIR -84 178 12 1871 132 14 30 chr18 14521115 14521410 -71467524 - AluSx SINE Alu -22 290 1 250 309 142 0 chr18 14522687 14522962 -71465972 + L1ME4a LINE L1 5765 6078 -43 321 207 0 0 chr18 14523188 14523270 -71465664 + T-rich Low_complexity Low_complexity 1 82 0 811 290 83 0 chr18 14523672 14523972 -71464962 + MER58B DNA MER1_type 9 333 -8 222 105 0 0 chr18 14524432 14524470 -71464464 + (TG)n Simple_repeat Simple_repeat 1 38 0 3649 159 20 31 chr18 14524896 14525626 -71463308 + MER50 LTR ERV1 1 722 -12 297 256 75 73 chr18 14525886 14526312 -71462622 - L1MC5 LINE L1 -217 7744 7318 317 342 59 26 chr18 14526312 14526464 -71462470 - L1MC4a LINE L1 -439 7369 7213 240 271 107 28 chr18 14526543 14526720 -71462214 - L1MC5 LINE L1 -771 7190 7000 1265 164 32 0 chr18 14526801 14527020 -71461914 - AluJb SINE Alu -2 310 85 28 71 0 0 chr18 14527773 14527829 -71461105 + AT_rich Low_complexity Low_complexity 1 56 0 336 48 0 0 chr18 14528134 14528176 -71460758 + (TTTTA)n Simple_repeat Simple_repeat 2 43 0 707 158 8 0 chr18 14528176 14528296 -71460638 - AluJb SINE Alu -191 121 1 255 125 0 0 chr18 14530078 14530118 -71458816 + (T)n Simple_repeat Simple_repeat 1 40 0 2434 83 0 10 chr18 14530137 14530449 -71458485 + AluSc SINE Alu 1 309 0 541 294 47 62 chr18 14531079 14531354 -71457580 - L2 LINE L2 -124 3189 2919 557 279 182 48 chr18 14531412 14531868 -71457066 + L2 LINE L2 1361 1877 -1437 328 286 131 40 chr18 14531946 14532344 -71456590 - L2 LINE L2 -717 2597 2164 2377 143 23 46 chr18 14533527 14533832 -71455102 + L1MA7 LINE L1 5822 6132 -159 2131 123 0 0 chr18 14533832 14534124 -71454810 + AluSx SINE Alu 1 292 -20 183 100 0 0 chr18 14534129 14534159 -71454775 + (TAAAA)n Simple_repeat Simple_repeat 3 32 0 2377 143 23 46 chr18 14534159 14534328 -71454606 + L1MA7 LINE L1 6136 6291 0 415 297 16 16 chr18 14534737 14534865 -71454069 + MER5A DNA MER1_type 40 167 -22 275 216 8 149 chr18 14535665 14535799 -71453135 - MER5B DNA MER1_type -34 144 30 260 174 0 0 chr18 14536673 14536719 -71452215 + L2 LINE L2 3267 3312 -1 916 322 60 37 chr18 14537127 14537724 -71451210 - L2 LINE L2 -338 2976 2366 2196 118 0 0 chr18 14538385 14538681 -71450253 - AluY SINE Alu -15 296 1 198 330 154 0 chr18 14541028 14541119 -71447815 + L3 LINE CR1 1471 1575 -2 243 296 136 8 chr18 14541219 14541351 -71447583 - MIR SINE MIR -37 225 77 962 105 38 0 chr18 14541428 14541584 -71447350 + L1PA8 LINE L1 6020 6180 0 2212 115 0 0 chr18 14541984 14542272 -71446662 - AluSx SINE Alu -24 288 1 25 65 0 0 chr18 14545201 14545247 -71443687 + AT_rich Low_complexity Low_complexity 1 46 0 395 270 123 6 chr18 14545306 14545469 -71443465 - MIR SINE MIR 0 262 81 272 288 106 0 chr18 14545548 14545680 -71443254 - L1ME4a LINE L1 -137 5984 5839 6316 138 22 11 chr18 14545946 14547207 -71441727 + L1MA4 LINE L1 5023 6295 -5 195 42 0 0 chr18 14548291 14548315 -71440619 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 280 267 56 44 chr18 14548352 14548442 -71440492 - MER103 DNA DNA -54 112 22 306 270 108 27 chr18 14548721 14548869 -71440065 - MIR3 SINE MIR -24 184 25 187 282 51 39 chr18 14549486 14549564 -71439370 + L2 LINE L2 2248 2326 -988 306 218 39 13 chr18 14550732 14550810 -71438124 - L2 LINE L2 0 3313 3234 182 304 0 88 chr18 14551074 14551199 -71437735 - L2 LINE L2 -1039 2275 2162 2586 62 0 0 chr18 14551488 14551792 -71437142 - AluY SINE Alu -7 304 1 311 289 10 0 chr18 14551865 14551969 -71436965 + L1ME LINE L1 5721 5825 -337 477 0 0 0 chr18 14552944 14552997 -71435937 + (TA)n Simple_repeat Simple_repeat 1 53 0 230 0 33 0 chr18 14553321 14553351 -71435583 + (TATG)n Simple_repeat Simple_repeat 2 32 0 683 230 40 13 chr18 14553643 14553795 -71435139 - MER63 DNA MER1_type -280 782 1 3023 138 38 28 chr18 14554696 14554925 -71434009 - L1MA4 LINE L1 -280 6020 5795 2313 113 0 0 chr18 14554925 14555234 -71433700 - AluSc SINE Alu 0 309 1 3023 138 38 28 chr18 14555234 14555532 -71433402 - L1MA4 LINE L1 -505 5795 5488 2569 152 47 43 chr18 14555554 14555911 -71433023 - L1MA8 LINE L1 -23 6289 5939 2471 81 0 3 chr18 14555911 14556218 -71432716 - AluY SINE Alu -5 306 1 2569 152 47 43 chr18 14556218 14556460 -71432474 - L1MA8 LINE L1 -373 5939 5700 254 314 12 12 chr18 14557044 14557130 -71431804 - L2 LINE L2 -2 3270 3185 2486 72 0 0 chr18 14557250 14557554 -71431380 + AluY SINE Alu 1 304 -7 188 311 107 10 chr18 14557806 14557909 -71431025 + MIR SINE MIR 69 181 -81 419 192 13 0 chr18 14558344 14558422 -71430512 - MER44D DNA MER2_type 0 705 627 * 414 100 0 0 chr18 14558422 14558482 -71430452 + (TA)n Simple_repeat Simple_repeat 1 60 0 502 113 0 0 chr18 14558482 14558543 -71430391 - MSTA LTR MaLR -358 70 7 317 82 20 0 chr18 14558543 14558592 -71430342 + (TA)n Simple_repeat Simple_repeat 2 51 0 1534 137 12 24 chr18 14558596 14558845 -71430089 - MER44D DNA MER2_type -93 516 1 2561 275 125 35 chr18 14558855 14558883 -71430051 - L1MC4 LINE L1 -221 7821 7797 2463 135 49 51 chr18 14558883 14559135 -71429799 - MSTA LTR MaLR 0 428 176 2251 105 0 7 chr18 14559135 14559440 -71429494 - AluSc SINE Alu -6 303 1 2463 135 49 51 chr18 14559440 14559616 -71429318 - MSTA LTR MaLR -252 176 1 2561 275 125 35 chr18 14559616 14560826 -71428108 - L1MC4 LINE L1 -245 7797 6471 927 273 110 21 chr18 14561628 14562149 -71426785 + MLT2E LTR ERVL 2 624 -4 2881 94 11 5 chr18 14562471 14562844 -71426090 - THE1C LTR MaLR 0 375 1 269 264 26 77 chr18 14562910 14563065 -71425869 - MER112 DNA MER1_type -8 252 106 2053 115 42 0 chr18 14563122 14563410 -71425524 + AluSx SINE Alu 1 300 -12 269 279 0 0 chr18 14563501 14563569 -71425365 - MER46C DNA MER2_type -9 329 262 227 238 238 0 chr18 14563689 14563769 -71425165 - MER46C DNA MER2_type -229 109 11 1918 232 15 40 chr18 14564132 14564298 -71424636 + L1ME1 LINE L1 5650 5819 -347 364 100 0 0 chr18 14564298 14564358 -71424576 + L1MA5 LINE L1 6241 6300 0 1918 232 15 40 chr18 14564358 14564716 -71424218 + L1ME1 LINE L1 5819 6161 -5 207 200 0 22 chr18 14564719 14564764 -71424170 + GA-rich Low_complexity Low_complexity 3 46 0 34 0 0 0 chr18 14565279 14565313 -71423621 + AT_rich Low_complexity Low_complexity 1 34 0 213 211 0 0 chr18 14565902 14565940 -71422994 - L2 LINE L2 -15 3298 3261 4207 176 14 18 chr18 14565978 14566242 -71422692 + MER50 LTR ERV1 1 265 -469 2093 113 3 7 chr18 14566242 14566542 -71422392 + AluSq SINE Alu 1 299 -14 4207 176 14 18 chr18 14566542 14567014 -71421920 + MER50 LTR ERV1 265 734 0 2239 97 0 3 chr18 14567235 14567523 -71421411 + AluSx SINE Alu 1 287 -25 2357 98 0 9 chr18 14567847 14568163 -71420771 + AluSq SINE Alu 1 313 0 1607 136 42 68 chr18 14569167 14569263 -71419671 + THE1B LTR MaLR 65 162 -202 2220 110 0 7 chr18 14569263 14569562 -71419372 - AluSx SINE Alu -15 297 1 1607 136 42 68 chr18 14569562 14569773 -71419161 + THE1B LTR MaLR 162 364 0 182 271 0 86 chr18 14570119 14570189 -71418745 - L2 LINE L2 -11 3302 3239 1877 80 0 0 chr18 14570285 14570523 -71418411 + AluY SINE Alu 73 310 -1 300 127 0 0 chr18 14572252 14572307 -71416627 + (CA)n Simple_repeat Simple_repeat 2 56 0 348 24 0 0 chr18 14573488 14573529 -71415405 + (CA)n Simple_repeat Simple_repeat 1 41 0 192 225 0 0 chr18 14573944 14573984 -71414950 + MIR SINE MIR 101 140 -122 2006 133 68 31 chr18 14574018 14574342 -71414592 + MER1B DNA MER1_type 2 337 0 443 300 155 23 chr18 14574807 14575110 -71413824 - LTR16C LTR ERVL -2 489 147 430 319 84 52 chr18 14575153 14575455 -71413479 + L2 LINE L2 2458 2776 -538 2296 77 0 20 chr18 14575455 14575753 -71413181 + AluY SINE Alu 1 292 -19 430 319 84 52 chr18 14575753 14575832 -71413102 + L2 LINE L2 2776 2851 -463 323 287 42 42 chr18 14576335 14576478 -71412456 + MIR SINE MIR 4 146 -116 723 294 32 39 chr18 14576600 14576910 -71412024 + MLT1I LTR MaLR 96 403 -6 2365 77 10 3 chr18 14577370 14577668 -71411266 + AluSp SINE Alu 1 300 -13 2173 98 3 3 chr18 14578634 14578929 -71410005 - AluSx SINE Alu -17 295 1 2259 115 0 0 chr18 14579231 14579526 -71409408 + AluSq SINE Alu 3 297 -16 309 276 9 38 chr18 14579591 14579696 -71409238 + MLT1J2 LTR MaLR 308 409 -41 411 227 175 0 chr18 14581022 14581119 -71407815 + MER58A DNA MER1_type 3 116 0 330 322 34 7 chr18 14581126 14581272 -71407662 + L1MC4 LINE L1 6844 6993 -1049 * 423 298 126 52 chr18 14581271 14581805 -71407129 + L1MC4 LINE L1 7347 8033 -9 2098 122 0 13 chr18 14582374 14582711 -71406223 + AluSx SINE Alu 4 336 0 255 267 59 74 chr18 14583014 14583149 -71405785 - MIR SINE MIR -52 210 78 2920 3 0 0 chr18 14583210 14583520 -71405414 + AluY SINE Alu 2 311 0 2179 111 3 0 chr18 14583865 14584189 -71404745 + AluSq SINE Alu 1 325 0 571 75 12 0 chr18 14585515 14585595 -71403339 - L1MA5 LINE L1 -2 6298 6218 1152 209 89 34 chr18 14586738 14587064 -71401870 + MER2 DNA MER2_type 1 344 0 400 250 128 14 chr18 14587977 14588125 -71400809 - MIR SINE MIR -12 250 86 694 93 0 0 chr18 14588175 14588272 -71400662 - pTR5 LTR ERV1 0 2438 2342 * 3377 170 85 51 chr18 14588267 14589194 -71399740 - pTR5 LTR ERV1 -741 1697 739 223 247 42 114 chr18 14589562 14589708 -71399226 + MIR SINE MIR 11 151 -57 310 246 67 27 chr18 14591221 14591368 -71397566 - L1ME LINE L1 -393 5728 5568 31 88 0 0 chr18 14591420 14591500 -71397434 + AT_rich Low_complexity Low_complexity 1 80 0 2119 128 3 0 chr18 14593121 14593427 -71395507 + AluSq SINE Alu 1 307 -6 8189 80 8 0 chr18 14593638 14594701 -71394233 + MER11C LTR ERVK 1 1071 0 211 318 135 0 chr18 14596240 14596366 -71392568 + MIR SINE MIR 112 254 -8 2073 89 39 0 chr18 14597937 14598218 -71390716 - AluY SINE Alu -19 292 1 496 236 121 0 chr18 14598575 14598715 -71390219 - MER63A DNA MER1_type -4 206 50 30 0 0 0 chr18 14599577 14599607 -71389327 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr18 14600892 14600915 -71388019 + AT_rich Low_complexity Low_complexity 1 23 0 5587 100 38 8 chr18 14602166 14603013 -71385921 + MER4D LTR ERV1 1 872 0 2305 63 0 14 chr18 14603536 14603850 -71385084 - AluY SINE Alu 0 310 1 265 227 0 13 chr18 14603934 14604009 -71384925 - L1ME4a LINE L1 -84 6037 5964 203 0 37 0 chr18 14604043 14604070 -71384864 + (TG)n Simple_repeat Simple_repeat 1 28 0 210 71 0 0 chr18 14604070 14604098 -71384836 + (GA)n Simple_repeat Simple_repeat 2 29 0 245 279 13 0 chr18 14604158 14604237 -71384697 - L1ME4a LINE L1 -283 5838 5759 1405 147 9 0 chr18 14604547 14604765 -71384169 + AluJb SINE Alu 85 304 -8 203 389 36 22 chr18 14604806 14604945 -71383989 - L2 LINE L2 -15 3257 3117 1964 141 3 7 chr18 14604990 14605295 -71383639 + AluJo SINE Alu 1 304 -8 2182 138 28 6 chr18 14606049 14606405 -71382529 + THE1B LTR MaLR 1 364 0 471 35 0 0 chr18 14606977 14607034 -71381900 + (TG)n Simple_repeat Simple_repeat 2 58 0 953 249 8 25 chr18 14607170 14607407 -71381527 - MIR SINE MIR -25 237 5 303 278 11 11 chr18 14607732 14607822 -71381112 + L3 LINE CR1 1309 1398 -179 189 246 198 40 chr18 14610497 14610623 -71378311 + MIR3 SINE MIR 32 177 -31 1897 115 91 7 chr18 14611156 14611442 -71377492 + AluY SINE Alu 1 310 -1 4920 57 0 3 chr18 14611682 14612302 -71376632 + L1PA8 LINE L1 5555 6172 0 2182 112 0 0 chr18 14612934 14613228 -71375706 + AluSc SINE Alu 1 294 -15 228 237 41 107 chr18 14613444 14613613 -71375321 + L1MEd LINE L1 2 159 -5960 285 376 34 0 chr18 14613812 14613961 -71374973 + L1MEd LINE L1 509 662 -5457 2164 131 19 25 chr18 14614168 14614534 -71374400 + THE1B LTR MaLR 1 364 0 11777 92 5 4 chr18 14614534 14616113 -71372821 + THE1B-int LTR MaLR 1 1580 0 1742 159 38 23 chr18 14616113 14616459 -71372475 + THE1B LTR MaLR 1 364 0 364 299 78 18 chr18 14616465 14616632 -71372302 + L1MEd LINE L1 881 1057 -5062 245 118 20 0 chr18 14616841 14616892 -71372042 + (TA)n Simple_repeat Simple_repeat 2 53 0 3352 251 91 40 chr18 14617046 14617510 -71371424 + L1MEc LINE L1 40 479 -5917 949 183 0 0 chr18 14617510 14617663 -71371271 - FRAM SINE Alu -13 153 1 3352 251 91 40 chr18 14617663 14618718 -71370216 + L1MEc LINE L1 479 1637 -4759 353 303 155 60 chr18 14618723 14619007 -71369927 + L1MDa LINE L1 385 695 -5845 1204 226 40 48 chr18 14619024 14619529 -71369405 + L1MDa LINE L1 982 1482 -5061 753 215 10 29 chr18 14619567 14619772 -71369162 + L1MDa LINE L1 1736 1936 -4604 977 241 122 14 chr18 14619919 14620420 -71368514 + L1MDa LINE L1 2038 2592 -4129 32 26 0 0 chr18 14620498 14620537 -71368397 + AT_rich Low_complexity Low_complexity 1 39 0 249 369 121 0 chr18 14622611 14622752 -71366182 - L2 LINE L2 -25 3247 3090 249 301 115 88 chr18 14622900 14623271 -71365663 + L2 LINE L2 2201 2596 -718 2361 173 26 15 chr18 14623271 14623727 -71365207 + MER65C LTR ERV1 1 461 0 249 301 115 88 chr18 14623727 14623954 -71364980 + L2 LINE L2 2596 2815 -499 262 331 47 61 chr18 14624071 14624219 -71364715 + L2 LINE L2 3127 3272 0 2119 232 73 50 chr18 14624547 14625943 -71362991 - L1ME1 LINE L1 0 6166 4742 1003 211 46 20 chr18 14625953 14626257 -71362677 - LTR53 LTR ERVL -11 508 197 1415 218 81 5 chr18 14626411 14626833 -71362101 - L1ME1 LINE L1 -1406 4740 4287 208 158 0 26 chr18 14626915 14626953 -71361981 + GA-rich Low_complexity Low_complexity 2 38 0 286 282 27 18 chr18 14627293 14627403 -71361531 + GA-rich Low_complexity Low_complexity 3 113 0 444 206 70 85 chr18 14628079 14628278 -71360656 + L2 LINE L2 3118 3313 0 2036 163 32 42 chr18 14628510 14629006 -71359928 + L1MA7 LINE L1 4290 4789 -1502 2275 98 10 3 chr18 14629006 14629311 -71359623 + AluSq SINE Alu 1 307 -6 2036 163 32 42 chr18 14629311 14629437 -71359497 + L1MA7 LINE L1 4789 4915 -1376 2158 120 13 10 chr18 14629437 14629745 -71359189 + AluSg SINE Alu 1 309 -1 2036 163 32 42 chr18 14629745 14631008 -71357926 + L1MA7 LINE L1 4915 6290 -1 23 54 0 0 chr18 14631694 14631731 -71357203 + AT_rich Low_complexity Low_complexity 1 37 0 257 324 28 9 chr18 14633077 14633185 -71355749 + MIR3 SINE MIR 66 175 -33 2390 80 0 10 chr18 14633220 14633521 -71355413 + AluY SINE Alu 1 298 -13 2211 129 13 16 chr18 14633522 14633895 -71355039 + L1PB1 LINE L1 5777 6148 -3 23 54 0 0 chr18 14633895 14633932 -71355002 + AT_rich Low_complexity Low_complexity 1 37 0 2019 154 3 0 chr18 14635331 14635630 -71353304 + AluSg SINE Alu 1 300 -10 2922 179 27 90 chr18 14636908 14637765 -71351169 - L1MB5 LINE L1 -9 6165 5363 235 253 138 11 chr18 14637939 14638026 -71350908 + L1ME LINE L1 5604 5701 -420 189 318 100 27 chr18 14638223 14638333 -71350601 + L2 LINE L2 3195 3312 -1 449 292 45 49 chr18 14638505 14638813 -71350121 + L2 LINE L2 2425 2731 -583 26 0 0 0 chr18 14638925 14638951 -71349983 + AT_rich Low_complexity Low_complexity 1 26 0 5778 138 18 19 chr18 14638951 14639339 -71349595 - L1PB1 LINE L1 -1 6150 5763 2255 118 0 0 chr18 14639339 14639643 -71349291 - AluY SINE Alu -7 304 1 5778 138 18 19 chr18 14639643 14640234 -71348700 - L1PB1 LINE L1 -388 5763 5172 198 0 0 0 chr18 14640234 14640256 -71348678 + (TTA)n Simple_repeat Simple_repeat 1 22 0 5778 138 18 19 chr18 14640256 14640840 -71348094 - L1PB1 LINE L1 -979 5172 4588 349 343 86 73 chr18 14642258 14642640 -71346294 - L2 LINE L2 0 3272 2886 396 0 0 0 chr18 14642987 14643031 -71345903 + (CA)n Simple_repeat Simple_repeat 1 44 0 181 343 60 0 chr18 14643322 14643389 -71345545 + L3 LINE CR1 1000 1070 -507 310 318 132 11 chr18 14643471 14643660 -71345274 + L3 LINE CR1 1191 1402 -175 437 295 43 21 chr18 14644147 14644330 -71344604 + MIR3 SINE MIR 4 191 -64 1049 101 0 0 chr18 14644337 14644466 -71344468 + AluSq/x SINE Alu 1 129 -184 352 40 0 0 chr18 14644467 14644517 -71344417 + AluY SINE Alu 249 298 -2 204 258 67 45 chr18 14645055 14645144 -71343790 + MIR SINE MIR 24 114 -148 468 219 65 0 chr18 14645180 14645303 -71343631 - MIR SINE MIR -18 244 114 438 20 0 0 chr18 14649327 14649378 -71339556 + (TG)n Simple_repeat Simple_repeat 2 52 0 23 54 0 0 chr18 14649639 14649676 -71339258 + AT_rich Low_complexity Low_complexity 1 37 0 263 363 44 0 chr18 14649676 14649789 -71339145 - L3 LINE CR1 -92 1485 1368 1672 190 8 44 chr18 14650051 14650378 -71338556 + L1MB7 LINE L1 5791 6103 -81 2335 80 0 43 chr18 14650378 14650703 -71338231 + AluY SINE Alu 1 311 0 1672 190 8 44 chr18 14650703 14650764 -71338170 + L1MB7 LINE L1 6103 6165 -19 247 322 99 29 chr18 14652349 14652874 -71336060 + L1 LINE L1 3595 4156 -1990 342 238 105 23 chr18 14652928 14653100 -71335834 + L1 LINE L1 4205 4390 -1756 659 231 56 92 chr18 14653122 14653460 -71335474 + MLT2C1 LTR ERVL 17 342 -55 22 0 0 0 chr18 14653492 14653514 -71335420 + AT_rich Low_complexity Low_complexity 1 22 0 319 167 28 14 chr18 14653564 14653636 -71335298 + HsTC2 DNA Tc2 1794 1866 -32 715 270 19 8 chr18 14653656 14653915 -71335019 + L1MB8 LINE L1 3731 3992 -2154 2007 142 18 26 chr18 14653920 14654327 -71334607 + MLT2A2 LTR ERVL 1 308 -145 500 182 0 20 chr18 14654340 14654439 -71334495 - MSTB LTR MaLR -329 97 1 655 78 0 0 chr18 14654557 14654647 -71334287 - MLT2A2 LTR ERVL -11 442 353 319 288 8 17 chr18 14654738 14654856 -71334078 + L1MB8 LINE L1 4496 4612 -1534 2132 140 0 0 chr18 14655058 14655358 -71333576 - AluSx SINE Alu -12 300 1 4256 261 71 41 chr18 14655516 14657645 -71331289 + L1MA10 LINE L1 2 1865 -4345 1395 176 17 7 chr18 14657731 14658021 -71330913 - L1 LINE L1 -1197 4949 4657 889 208 64 21 chr18 14658031 14658451 -71330483 + L1MA10 LINE L1 2006 2448 -3762 * 8201 190 31 15 chr18 14658431 14660337 -71328597 + L1MA10 LINE L1 3561 5526 -872 1247 200 28 97 chr18 14660337 14660727 -71328207 + MLT1A1 LTR MaLR 1 363 -2 8201 190 31 15 chr18 14660727 14661614 -71327320 + L1MA10 LINE L1 5526 6397 -1 359 332 64 38 chr18 14661640 14661875 -71327059 + L1MB8 LINE L1 4924 5164 -982 361 330 142 23 chr18 14661948 14662537 -71326397 + L1MB8 LINE L1 5258 5906 -272 248 286 32 13 chr18 14662919 14663073 -71325861 + (TA)n Simple_repeat Simple_repeat 2 158 0 835 263 48 38 chr18 14663100 14663495 -71325439 - L1M4 LINE L1 -2255 3891 3493 483 130 0 0 chr18 14663495 14663572 -71325362 + (CA)n Simple_repeat Simple_repeat 2 78 0 10788 83 15 1 chr18 14663572 14665847 -71323087 - L1PA7 LINE L1 -4 6150 3853 264 30 0 0 chr18 14665847 14665880 -71323054 + (TTG)n Simple_repeat Simple_repeat 2 34 0 2225 78 0 3 chr18 14665880 14666164 -71322770 - AluY SINE Alu -28 283 1 25 0 0 0 chr18 14666174 14666199 -71322735 + AT_rich Low_complexity Low_complexity 1 25 0 5138 118 24 4 chr18 14666199 14666725 -71322209 - L1PB1 LINE L1 -1 6150 5636 2189 113 0 31 chr18 14666725 14667044 -71321890 - AluSg SINE Alu -1 309 1 5138 118 24 4 chr18 14667044 14667137 -71321797 - L1PB1 LINE L1 -515 5636 5546 2246 81 33 19 chr18 14667137 14667444 -71321490 + AluSx SINE Alu 2 312 0 5138 118 24 4 chr18 14667444 14667824 -71321110 - L1PB1 LINE L1 -605 5546 5152 1975 186 109 6 chr18 14668697 14669176 -71319758 - L1MB5 LINE L1 -7 6167 5640 311 304 32 63 chr18 14669286 14669444 -71319490 + L1ME LINE L1 319 471 -5599 1786 259 45 53 chr18 14669486 14670675 -71318259 + L1ME LINE L1 450 1603 -4477 300 53 0 0 chr18 14670689 14670727 -71318207 + (CA)n Simple_repeat Simple_repeat 2 39 0 1465 214 23 26 chr18 14671694 14672039 -71316895 - MER2 DNA MER2_type 0 344 1 287 182 39 13 chr18 14672280 14672357 -71316577 + MER116 DNA Mariner 2 80 0 658 277 64 44 chr18 14673061 14673404 -71315530 - LTR16A LTR ERVL -6 444 95 1999 145 20 0 chr18 14673942 14674239 -71314695 + AluSx SINE Alu 1 303 -9 365 58 19 0 chr18 14674240 14674292 -71314642 + (GGAA)n Simple_repeat Simple_repeat 1 53 0 1151 199 85 36 chr18 14674344 14674650 -71314284 - MER58B DNA MER1_type -20 321 1 241 23 23 47 chr18 14675574 14675617 -71313317 + (TTTTG)n Simple_repeat Simple_repeat 1 42 0 2951 168 34 22 chr18 14675637 14676234 -71312700 - MER6A DNA MER2_type 0 605 2 276 306 92 23 chr18 14677139 14677312 -71311622 + L2 LINE L2 3119 3303 -10 630 314 101 16 chr18 14678379 14678685 -71310249 + L2 LINE L2 2981 3312 -1 269 200 31 15 chr18 14679008 14679073 -71309861 + CT-rich Low_complexity Low_complexity 3 68 0 1380 142 11 11 chr18 14679217 14679484 -71309450 - L1MA4 LINE L1 -1 6299 6033 563 218 20 20 chr18 14679687 14679834 -71309100 - L1ME2 LINE L1 -34 6130 5984 * 771 283 60 39 chr18 14679827 14680294 -71308640 + L1MEc LINE L1 1342 1818 -4578 391 252 76 15 chr18 14681019 14681150 -71307784 - L2 LINE L2 -2 3270 3132 530 280 11 29 chr18 14681599 14681774 -71307160 - MER5B DNA MER1_type -6 172 1 2036 182 2 18 chr18 14681975 14682370 -71306564 + MLT1B LTR MaLR 1 389 -1 275 299 15 0 chr18 14682482 14682549 -71306385 - L2 LINE L2 -2 3270 3203 227 31 31 0 chr18 14682937 14682969 -71305965 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 244 378 27 0 chr18 14683100 14683211 -71305723 + L2 LINE L2 3198 3311 -2 792 239 0 0 chr18 14684168 14684323 -71304611 + FRAM SINE Alu 1 155 -11 1734 182 3 3 chr18 14685095 14685386 -71303548 + AluJb SINE Alu 1 291 -21 1400 179 181 15 chr18 14685436 14685833 -71303101 + MLT1D LTR MaLR 43 505 0 401 188 0 0 chr18 14687959 14688028 -71300906 - MLT1D LTR MaLR -394 111 43 633 329 91 23 chr18 14689424 14689865 -71299069 + L3 LINE CR1 1099 1569 -8 192 222 0 0 chr18 14690171 14690216 -71298718 + L2 LINE L2 2944 2988 -325 433 121 0 15 chr18 14690295 14690361 -71298573 - MLT1C LTR MaLR 0 467 403 595 172 0 0 chr18 14690367 14690460 -71298474 + FLAM_C SINE Alu 26 118 -25 1299 221 96 11 chr18 14690492 14690688 -71298246 - MLT1C LTR MaLR -51 416 238 288 0 0 0 chr18 14690688 14690720 -71298214 + (TGG)n Simple_repeat Simple_repeat 1 32 0 1299 221 96 11 chr18 14690720 14690876 -71298058 - MLT1C LTR MaLR -229 238 34 486 0 0 0 chr18 14690877 14690931 -71298003 + (TG)n Simple_repeat Simple_repeat 2 55 0 643 305 76 68 chr18 14691340 14692060 -71296874 + L2 LINE L2 2321 3050 -263 263 293 138 11 chr18 14692311 14692485 -71296449 + L2 LINE L2 3118 3313 0 232 246 51 34 chr18 14694222 14694340 -71294594 - L2 LINE L2 -1 3312 3193 1334 204 125 3 chr18 14694876 14695220 -71293714 - MLT1B LTR MaLR -2 388 3 5480 112 269 77 chr18 14695271 14696693 -71292241 - pTR5 LTR ERV1 0 2438 743 2588 58 0 3 chr18 14696760 14697070 -71291864 + AluY SINE Alu 1 309 -2 2183 129 7 0 chr18 14697131 14697433 -71291501 - AluSq SINE Alu -8 305 2 29 0 0 0 chr18 14697438 14697467 -71291467 + AT_rich Low_complexity Low_complexity 1 29 0 347 297 140 22 chr18 14697581 14697803 -71291131 + MIR SINE MIR 15 262 0 209 301 14 14 chr18 14697884 14697957 -71290977 - MIR SINE MIR -104 104 32 194 0 0 37 chr18 14700715 14700742 -71288192 + (TTTTC)n Simple_repeat Simple_repeat 4 29 0 2221 126 7 0 chr18 14700746 14701056 -71287878 - AluSx SINE Alu 0 312 1 277 340 184 35 chr18 14701647 14702244 -71286690 + L2 LINE L2 2292 2977 -337 339 221 63 0 chr18 14702903 14702998 -71285936 - MIR3 SINE MIR -27 181 81 2228 73 0 31 chr18 14703486 14703796 -71285138 - AluY SINE Alu 0 301 1 201 132 0 0 chr18 14704442 14704480 -71284454 + (TC)n Simple_repeat Simple_repeat 1 38 0 342 326 141 5 chr18 14705595 14705779 -71283155 - MIR SINE MIR 0 262 54 2432 52 20 3 chr18 14706783 14707089 -71281845 - AluY SINE Alu 0 311 1 1146 108 42 0 chr18 14707203 14707369 -71281565 + AluSg/x SINE Alu 135 307 -3 1605 164 129 70 chr18 14707638 14708040 -71280894 + MSTB LTR MaLR 1 426 0 223 315 161 0 chr18 14708465 14708614 -71280320 - MER5B DNA MER1_type -4 174 2 49 52 0 0 chr18 14709044 14709121 -71279813 + AT_rich Low_complexity Low_complexity 1 77 0 1349 94 6 11 chr18 14709491 14709671 -71279263 - AluSg/x SINE Alu -44 266 88 203 419 0 0 chr18 14711115 14711239 -71277695 + MIR SINE MIR 20 143 -65 206 224 0 20 chr18 14711569 14711618 -71277316 + GA-rich Low_complexity Low_complexity 1 48 0 234 0 0 0 chr18 14712185 14712211 -71276723 + (CA)n Simple_repeat Simple_repeat 1 26 0 258 81 0 0 chr18 14715674 14715711 -71273223 + (CA)n Simple_repeat Simple_repeat 2 38 0 459 144 124 59 chr18 14715733 14715886 -71273048 + MER53 DNA DNA 1 163 -26 1715 120 95 15 chr18 14716132 14716406 -71272528 - AluSx SINE Alu -16 296 1 236 213 38 12 chr18 14716576 14716656 -71272278 + (TA)n Simple_repeat Simple_repeat 1 82 0 2832 211 30 62 chr18 14717108 14717298 -71271636 + MER82 DNA MER2_type 1 196 -457 800 172 0 0 chr18 14717298 14717420 -71271514 + FLAM_C SINE Alu 1 122 -11 2832 211 30 62 chr18 14717420 14717445 -71271489 + MER82 DNA MER2_type 196 220 -433 2399 70 16 19 chr18 14717445 14717757 -71271177 + AluY SINE Alu 1 311 0 2832 211 30 62 chr18 14717757 14718214 -71270720 + MER82 DNA MER2_type 220 652 -1 454 206 48 24 chr18 14721128 14721254 -71267680 + MIR SINE MIR 105 233 -29 219 308 84 9 chr18 14721702 14721809 -71267125 - MIR SINE MIR -132 130 16 * 353 233 33 11 chr18 14721791 14721881 -71267053 + L2 LINE L2 3181 3272 0 2106 126 50 34 chr18 14721976 14722334 -71266600 + THE1B LTR MaLR 1 364 0 234 0 0 0 chr18 14722960 14722986 -71265948 + (CA)n Simple_repeat Simple_repeat 2 27 0 31 26 0 0 chr18 14723212 14723250 -71265684 + AT_rich Low_complexity Low_complexity 1 38 0 447 35 0 0 chr18 14723773 14723830 -71265104 + (TG)n Simple_repeat Simple_repeat 2 58 0 221 260 0 0 chr18 14724587 14724637 -71264297 + MIR SINE MIR 187 236 -26 228 215 21 75 chr18 14725514 14725607 -71263327 + MIR SINE MIR 119 206 -56 572 209 55 0 chr18 14725902 14726012 -71262922 - FLAM_A SINE Alu -20 122 7 1950 114 44 27 chr18 14726186 14726483 -71262451 + AluSg SINE Alu 1 302 -8 252 91 0 109 chr18 14726903 14726958 -71261976 - L2 LINE L2 0 3272 3224 2675 52 0 0 chr18 14727367 14727675 -71261259 + AluY SINE Alu 1 308 -3 273 276 47 8 chr18 14727866 14727993 -71260941 - L2 LINE L2 -234 3079 2948 422 286 114 37 chr18 14728405 14728702 -71260232 - LTR16A LTR ERVL -6 444 125 289 254 142 0 chr18 14728953 14729087 -71259847 - LTR33A LTR ERVL -7 516 364 306 259 154 19 chr18 14729627 14729789 -71259145 + LTR33A LTR ERVL 330 513 -10 447 373 79 0 chr18 14729966 14730207 -71258727 + L3 LINE CR1 1317 1576 -1 37449 39 9 4 chr18 14730561 14735883 -71253051 + L1PA4 LINE L1 806 6154 -1 1179 107 127 15 chr18 14736375 14736580 -71252354 + MER30 DNA MER1_type 3 230 0 900 211 52 52 chr18 14739014 14739140 -71249794 + L1M1 LINE L1 3148 3273 -4292 2271 111 0 0 chr18 14739140 14739437 -71249497 - AluSx SINE Alu -13 299 3 900 211 52 52 chr18 14739437 14739731 -71249203 + L1M1 LINE L1 3272 3568 -3997 794 79 9 0 chr18 14739731 14739845 -71249089 + L1PB4 LINE L1 6041 6155 -1 9748 187 39 12 chr18 14739938 14740454 -71248480 + L1M1 LINE L1 3558 4059 -3506 2314 98 3 0 chr18 14740454 14740760 -71248174 - AluY SINE Alu -3 308 2 9748 187 39 12 chr18 14740760 14741586 -71247348 + L1M1 LINE L1 4059 4861 -2704 186 43 0 0 chr18 14741586 14741609 -71247325 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 9748 187 39 12 chr18 14741609 14742566 -71246368 + L1M1 LINE L1 4861 5920 -1645 1544 167 28 7 chr18 14742566 14742853 -71246081 - MER7A DNA MER2_type 0 346 56 400 271 93 80 chr18 14743684 14744049 -71244885 - L2 LINE L2 -2 3311 2942 202 238 32 16 chr18 14744110 14744173 -71244761 - L2 LINE L2 -490 2824 2761 345 305 200 0 chr18 14744861 14745061 -71243873 - MIR SINE MIR 0 262 23 537 307 68 18 chr18 14745509 14745802 -71243132 + MLT1E2 LTR MaLR 2 304 -263 24 0 0 0 chr18 14745897 14745921 -71243013 + AT_rich Low_complexity Low_complexity 1 24 0 2289 101 0 0 chr18 14746159 14746456 -71242478 - AluY SINE Alu -14 297 1 1626 240 81 63 chr18 14797751 14798491 -71190443 + L1M4 LINE L1 2677 3438 -2708 2473 77 0 0 chr18 14798491 14798802 -71190132 + AluY SINE Alu 1 311 0 1626 240 81 63 chr18 14798802 14798977 -71189957 + L1M4 LINE L1 3438 3608 -2538 2595 64 0 0 chr18 14798983 14799294 -71189640 + AluY SINE Alu 1 311 0 417 269 108 24 chr18 14799380 14799547 -71189387 + L1MC4a LINE L1 6548 6728 -1080 607 261 43 11 chr18 14799661 14799849 -71189085 + MLT1E2 LTR MaLR 422 615 -11 264 296 28 46 chr18 14800559 14800667 -71188267 + MIR SINE MIR 49 154 -108 335 358 58 12 chr18 14801152 14801409 -71187525 - LTR67 LTR ERVL -253 304 36 2665 134 51 57 chr18 14802316 14802470 -71186464 + L1MC1 LINE L1 5813 5966 -367 2319 92 3 13 chr18 14802470 14802784 -71186150 + AluSq SINE Alu 1 311 -2 2665 134 51 57 chr18 14802784 14803135 -71185799 + L1MC1 LINE L1 5966 6315 -18 21 57 0 0 chr18 14803787 14803822 -71185112 + AT_rich Low_complexity Low_complexity 1 35 0 324 0 0 0 chr18 14804188 14804224 -71184710 + (TA)n Simple_repeat Simple_repeat 2 37 0 1117 122 6 0 chr18 14804685 14804857 -71184077 + AluY SINE Alu 139 311 0 762 286 60 20 chr18 14804943 14805299 -71183635 + L1MC4 LINE L1 6548 7010 -897 437 244 57 71 chr18 14805301 14805351 -71183583 + L1MC4 LINE L1 7551 7600 -442 2053 108 41 7 chr18 14805351 14805646 -71183288 + AluSx SINE Alu 1 305 -7 437 244 57 71 chr18 14805646 14805858 -71183076 + L1MC4 LINE L1 7600 7918 -124 254 266 36 65 chr18 14805890 14805906 -71183028 + L1MC4 LINE L1 7902 7917 -125 195 42 0 0 chr18 14805906 14805930 -71183004 + (CAGAGA)n Simple_repeat Simple_repeat 6 29 0 254 266 36 65 chr18 14805930 14806052 -71182882 + L1MC4 LINE L1 7917 8036 -6 446 269 0 69 chr18 14808102 14808153 -71180781 + L2 LINE L2 3138 3191 -81 2141 67 15 0 chr18 14808153 14808421 -71180513 - AluY SINE Alu 0 311 40 446 269 0 69 chr18 14808421 14808514 -71180420 + L2 LINE L2 3191 3272 0 295 333 69 29 chr18 14808575 14808749 -71180185 - MIR SINE MIR -19 243 63 330 26 0 0 chr18 14809169 14809208 -71179726 + (TC)n Simple_repeat Simple_repeat 1 39 0 2304 54 20 3 chr18 14809208 14809503 -71179431 - AluY SINE Alu -11 300 1 22 0 0 0 chr18 14810643 14810665 -71178269 + AT_rich Low_complexity Low_complexity 1 22 0 1871 173 7 0 chr18 14810669 14810975 -71177959 + AluJo SINE Alu 5 312 0 22 0 0 0 chr18 14810975 14810997 -71177937 + AT_rich Low_complexity Low_complexity 1 22 0 4654 53 4 0 chr18 14812544 14813089 -71175845 - L1PA7 LINE L1 -1 6153 5607 256 167 28 0 chr18 14813332 14813404 -71175530 + (TA)n Simple_repeat Simple_repeat 1 74 0 419 228 93 93 chr18 14814143 14814226 -71174708 + MER112 DNA MER1_type 10 92 -168 2264 97 0 0 chr18 14814226 14814536 -71174398 - AluY SINE Alu 0 310 1 419 228 93 93 chr18 14814536 14814644 -71174290 + MER112 DNA MER1_type 91 202 -58 2254 104 0 0 chr18 14815601 14815890 -71173044 - AluSq SINE Alu -22 291 3 862 173 0 0 chr18 14816295 14816428 -71172506 - FLAM_C SINE Alu 0 133 1 276 107 53 120 chr18 14817050 14817125 -71171809 + L1MA7 LINE L1 6221 6290 -1 1503 242 91 36 chr18 14818567 14819042 -71169892 + MLT1D LTR MaLR 4 504 -1 1614 195 20 0 chr18 14819274 14819566 -71169368 + MLT1A1 LTR MaLR 62 359 -6 196 273 23 0 chr18 14819569 14819613 -71169321 - MIR SINE MIR -1 261 217 547 261 81 5 chr18 14820063 14820274 -71168660 - SST1 Satellite centromeric -150 1413 1187 345 316 71 19 chr18 14820276 14820431 -71168503 - MIR SINE MIR -55 207 45 407 288 14 27 chr18 14820510 14820656 -71168278 - L2 LINE L2 -1 3312 3169 183 273 55 18 chr18 14820646 14820701 -71168233 - L2 LINE L2 -10 3303 3247 * 206 207 17 0 chr18 14821899 14821957 -71166977 + (TA)n Simple_repeat Simple_repeat 1 59 0 392 67 17 0 chr18 14822018 14822078 -71166856 + (CA)n Simple_repeat Simple_repeat 2 62 0 25 65 0 0 chr18 14822960 14823006 -71165928 + AT_rich Low_complexity Low_complexity 1 46 0 462 242 33 26 chr18 14823744 14823897 -71165037 - L1MDb LINE L1 -3376 3164 3011 1592 229 38 17 chr18 14823912 14823935 -71164999 - L1MDb LINE L1 -3843 2697 2676 2602 39 0 23 chr18 14823935 14824245 -71164689 - AluY SINE Alu -8 303 1 1592 229 38 17 chr18 14824245 14824724 -71164210 - L1MDb LINE L1 -3864 2676 2191 207 250 0 0 chr18 14824725 14824765 -71164169 + (TG)n Simple_repeat Simple_repeat 1 40 0 250 100 0 20 chr18 14824765 14824815 -71164119 - LTR66 LTR ERVL -172 438 390 2070 208 66 112 chr18 14824820 14825952 -71162982 - L1MDb LINE L1 -4364 2176 1119 2446 67 0 0 chr18 14825952 14826249 -71162685 - AluSx SINE Alu -15 297 1 2070 208 66 112 chr18 14826249 14826529 -71162405 - L1MDb LINE L1 -5421 1119 828 244 333 67 11 chr18 14826591 14826681 -71162253 - L1MDb LINE L1 -5647 896 802 502 269 51 46 chr18 14826908 14827083 -71161851 - L1MDb LINE L1 -6197 343 168 294 193 14 184 chr18 14827079 14827291 -71161643 - L1MEc LINE L1 -5831 565 390 * 393 253 0 0 chr18 14827434 14827521 -71161413 + L1ME LINE L1 5592 5678 -488 * 2242 238 43 13 chr18 14827518 14828199 -71160735 - L1MEc LINE L1 -1056 5159 4459 1243 261 79 30 chr18 14828208 14828248 -71160686 - L1MEc LINE L1 -2369 3846 3809 2409 65 0 7 chr18 14828248 14828540 -71160394 + AluY SINE Alu 1 290 -21 1243 261 79 30 chr18 14828540 14829031 -71159903 - L1MEc LINE L1 -2406 3809 3289 1012 207 55 8 chr18 14829014 14829270 -71159664 - L1MEc LINE L1 -3183 3032 2765 * 1263 235 44 15 chr18 14829271 14829612 -71159322 - L1MEc LINE L1 -5797 599 249 3187 240 103 31 chr18 14829620 14829825 -71159109 - Charlie1a DNA MER1_type -1597 1164 975 2359 92 3 0 chr18 14829825 14830131 -71158803 - AluY SINE Alu -4 307 1 3187 240 103 31 chr18 14830131 14831002 -71157932 - Charlie1a DNA MER1_type -1786 975 10 411 21 0 0 chr18 14831280 14831328 -71157606 + (TA)n Simple_repeat Simple_repeat 2 49 0 667 230 186 56 chr18 14831608 14832031 -71156903 - MLT1E2 LTR MaLR -175 449 2 232 323 45 65 chr18 14832044 14832190 -71156744 + MIR SINE MIR 66 208 -54 2065 121 0 3 chr18 14832190 14832480 -71156454 + AluSx SINE Alu 1 289 -23 232 323 45 65 chr18 14832480 14832534 -71156400 + MIR SINE MIR 208 262 0 189 206 111 48 chr18 14832542 14832605 -71156329 + MIR SINE MIR 190 256 -6 6237 210 77 115 chr18 14832874 14833565 -71155369 + L1ME1 LINE L1 2410 3126 -3020 1896 206 97 95 chr18 14833565 14834217 -71154717 + MLT1E1 LTR MaLR 2 654 0 6237 210 77 115 chr18 14834217 14834622 -71154312 + L1ME1 LINE L1 3126 3545 -2601 1059 178 0 11 chr18 14834622 14834802 -71154132 + FRAM SINE Alu 1 174 -2 6237 210 77 115 chr18 14834802 14835468 -71153466 + L1ME1 LINE L1 3545 4235 -1911 1817 66 4 0 chr18 14835468 14835695 -71153239 + AluY SINE Alu 78 305 -6 6237 210 77 115 chr18 14835695 14835891 -71153043 + L1ME1 LINE L1 4235 4437 -1709 594 152 0 0 chr18 14835891 14835983 -71152951 + AluY SINE Alu 213 304 -7 6237 210 77 115 chr18 14835983 14836635 -71152299 + L1ME1 LINE L1 4437 5170 -976 2534 73 0 0 chr18 14836635 14836937 -71151997 + AluY SINE Alu 1 302 -9 6237 210 77 115 chr18 14836937 14837124 -71151810 + L1ME1 LINE L1 5170 5363 -783 1743 214 113 7 chr18 14837125 14837532 -71151402 + L1ME1 LINE L1 5438 5887 -279 409 134 15 15 chr18 14837611 14837678 -71151256 + Tigger5 DNA MER2_type 2254 2320 -3 271 169 271 0 chr18 14837681 14837740 -71151194 - Tigger5 DNA MER2_type -2248 75 1 315 260 40 67 chr18 14837740 14837890 -71151044 + L1ME1 LINE L1 5905 6050 -116 1194 339 46 26 chr18 14837891 14838495 -71150439 - HERVL LTR ERVL -2089 3396 2781 2196 100 4 0 chr18 14839085 14839366 -71149568 + AluSg SINE Alu 1 282 -28 277 332 77 44 chr18 14839679 14840043 -71148891 - MLT1K LTR MaLR -19 569 194 414 108 0 0 chr18 14840436 14840501 -71148433 + (TCCA)n Simple_repeat Simple_repeat 3 67 0 411 299 33 8 chr18 14840501 14840656 -71148278 - MER5B DNA MER1_type -28 161 4 2246 108 0 3 chr18 14841120 14841417 -71147517 - AluSq SINE Alu -17 296 1 247 373 103 14 chr18 14842550 14842899 -71146035 - L2 LINE L2 -699 2615 2236 475 315 71 29 chr18 14843682 14844223 -71144711 + L1MC/D LINE L1 5262 5811 -359 2617 17 0 0 chr18 14844303 14844590 -71144344 - AluYa5 SINE Alu -5 306 20 991 209 10 1 chr18 14847778 14848073 -71140861 + MER7A DNA MER2_type 1 337 0 248 195 24 49 chr18 14848138 14848220 -71140714 + L1ME4a LINE L1 3711 3790 -2356 1023 151 0 23 chr18 14848220 14848392 -71140542 + AluSg/x SINE Alu 136 303 -9 2925 270 40 8 chr18 14848395 14849450 -71139484 + L1ME4a LINE L1 3784 4871 -1275 440 249 127 19 chr18 14849607 14849812 -71139122 + L1ME4a LINE L1 5881 6107 -14 305 256 135 78 chr18 14851868 14852108 -71136826 + MIR SINE MIR 12 261 -1 239 269 140 55 chr18 14852123 14852278 -71136656 - MIR SINE MIR -45 163 39 562 190 40 27 chr18 14852830 14853033 -71135901 - LTR37A LTR ERV1 0 426 252 255 196 0 0 chr18 14853207 14853263 -71135671 + L1MA9 LINE L1 6257 6312 0 2270 56 7 0 chr18 14853392 14853680 -71135254 - L1PA5 LINE L1 -1 6153 5864 22 0 0 0 chr18 14853777 14853799 -71135135 + AT_rich Low_complexity Low_complexity 1 22 0 203 155 84 28 chr18 14854598 14854740 -71134194 + (TA)n Simple_repeat Simple_repeat 2 151 0 609 14 0 0 chr18 14854860 14854930 -71134004 + (CA)n Simple_repeat Simple_repeat 1 70 0 686 151 0 0 chr18 14854930 14855036 -71133898 + MER1B DNA MER1_type 69 174 -123 617 252 19 23 chr18 14855284 14855542 -71133392 + L1M4 LINE L1 4232 4488 -1658 1482 218 47 21 chr18 14855552 14855937 -71132997 + L1MC2 LINE L1 5918 6312 -32 1087 209 94 36 chr18 14856879 14857052 -71131882 + MLT2B1 LTR ERVL 1 163 -352 2129 139 0 35 chr18 14857052 14857398 -71131536 + MER1B DNA MER1_type 4 337 0 1087 209 94 36 chr18 14857398 14857595 -71131339 + MLT2B1 LTR ERVL 163 440 -75 222 37 0 0 chr18 14857632 14857659 -71131275 + (TG)n Simple_repeat Simple_repeat 2 28 0 259 275 22 0 chr18 14857693 14857784 -71131150 - L1MC4 LINE L1 -1336 6706 6614 240 184 0 0 chr18 14857784 14857833 -71131101 + (TATATG)n Simple_repeat Simple_repeat 5 53 0 278 135 77 0 chr18 14857842 14857894 -71131040 + MLT2B1 LTR ERVL 465 520 0 203 312 55 73 chr18 14858139 14858248 -71130686 + L2 LINE L2 3139 3245 -27 2320 57 0 30 chr18 14858994 14859292 -71129642 - AluY SINE Alu -22 289 1 2267 171 42 15 chr18 14860015 14860496 -71128438 - L1MA7 LINE L1 -1 6290 5797 240 182 65 13 chr18 14860669 14860823 -71128111 + (TA)n Simple_repeat Simple_repeat 1 162 0 2120 112 3 3 chr18 14862222 14862526 -71126408 - AluSx SINE Alu -8 304 1 21 0 0 0 chr18 14862542 14862563 -71126371 + AT_rich Low_complexity Low_complexity 1 21 0 276 272 58 10 chr18 14863722 14863825 -71125109 - MER103 DNA DNA -19 147 40 1170 241 52 32 chr18 14863875 14864277 -71124657 + LTR53 LTR ERVL 96 505 -14 495 190 121 0 chr18 14864431 14864547 -71124387 - MER7A DNA MER2_type -218 128 1 1809 175 48 0 chr18 14865124 14865455 -71123479 + MER7A DNA MER2_type 1 345 -1 1404 216 58 6 chr18 14865709 14866209 -71122725 + L1M4 LINE L1 2823 3348 -2798 347 218 194 14 chr18 14866209 14866420 -71122514 - L1M4 LINE L1 -1563 4583 4335 668 243 34 0 chr18 14866512 14866718 -71122216 + L1M4 LINE L1 3426 3638 -2508 339 189 23 76 chr18 14866702 14866834 -71122100 - L1M4 LINE L1 -3199 2947 2823 * 3562 242 77 27 chr18 14866982 14869354 -71119580 + L1ME1 LINE L1 3650 6135 -31 1146 286 119 42 chr18 14869640 14869996 -71118938 - L2 LINE L2 -2 3311 2984 2272 102 0 16 chr18 14869996 14870309 -71118625 + AluSq SINE Alu 1 308 -5 1146 286 119 42 chr18 14870309 14870955 -71117979 - L2 LINE L2 -329 2984 2232 1420 193 17 121 chr18 14871720 14872125 -71116809 - MLT1A1 LTR MaLR 0 365 3 357 62 0 0 chr18 14872130 14872178 -71116756 + (CA)n Simple_repeat Simple_repeat 2 49 0 336 273 46 45 chr18 14873067 14873220 -71115714 - MIR3 SINE MIR -22 186 26 201 130 53 47 chr18 14874341 14874510 -71114424 + (CA)n Simple_repeat Simple_repeat 2 171 0 369 92 50 25 chr18 14874556 14874675 -71114259 + (CA)n Simple_repeat Simple_repeat 1 122 0 280 103 39 77 chr18 14874768 14874924 -71114010 + (CACAC)n Simple_repeat Simple_repeat 1 150 0 253 211 0 0 chr18 14875195 14875247 -71113687 + LTR30 LTR ERV1 1 52 -670 2015 143 54 27 chr18 14875247 14875690 -71113244 + LTR12 LTR ERV1 55 468 -246 220 242 117 17 chr18 14879382 14879502 -71109432 - L2 LINE L2 -225 3047 2916 23 0 0 0 chr18 14880400 14880423 -71108511 + AT_rich Low_complexity Low_complexity 1 23 0 186 189 0 0 chr18 14880543 14880580 -71108354 + (TCTA)n Simple_repeat Simple_repeat 2 38 0 2848 16 0 0 chr18 14885955 14886273 -71102661 + AluYb8 SINE Alu 1 318 0 302 294 24 0 chr18 14886366 14886451 -71102483 - L2 LINE L2 -2 3311 3225 659 234 226 11 chr18 14886484 14886749 -71102185 - L2 LINE L2 -338 2976 2655 2016 157 0 6 chr18 14887183 14887495 -71101439 + AluSx SINE Alu 1 310 -2 305 298 28 35 chr18 14889161 14889302 -71099632 + L2 LINE L2 3173 3312 -1 246 348 34 0 chr18 14889438 14889527 -71099407 + MIR SINE MIR 81 172 -90 2189 128 0 0 chr18 14889578 14889875 -71099059 - AluSg SINE Alu -13 297 1 29 21 0 21 chr18 14889875 14889886 -71099048 + AT_rich Low_complexity Low_complexity 1 11 -35 2312 89 3 0 chr18 14889886 14890177 -71098757 - AluY SINE Alu -19 292 1 29 21 0 21 chr18 14890177 14890212 -71098722 + AT_rich Low_complexity Low_complexity 11 46 0 38 22 0 0 chr18 14890249 14890294 -71098640 + AT_rich Low_complexity Low_complexity 1 45 0 1538 142 10 42 chr18 14890414 14890698 -71098236 - PABL_B LTR ERV1 -55 612 338 4247 70 39 28 chr18 14890698 14891735 -71097199 - MER11A LTR ERVK 0 1266 1 1671 113 10 79 chr18 14891763 14891852 -71097082 - PABL_B LTR ERV1 -395 272 178 2286 79 6 44 chr18 14891852 14892167 -71096767 - AluY SINE Alu -8 303 1 1671 113 10 79 chr18 14892167 14892369 -71096565 - PABL_B LTR ERV1 -489 178 1 1373 180 99 31 chr18 14892640 14892962 -71095972 + MER2 DNA MER2_type 1 344 0 323 280 200 11 chr18 14892991 14893166 -71095768 + MIR SINE MIR 8 215 -47 202 367 0 25 chr18 14893302 14893381 -71095553 - MIR SINE MIR -174 88 12 221 253 0 67 chr18 14893884 14893959 -71094975 - L2 LINE L2 -215 3098 3029 191 314 141 70 chr18 14894108 14894910 -71094024 - L2 LINE L2 -413 2901 2043 187 310 35 35 chr18 14896345 14896458 -71092476 - MIR SINE MIR -78 130 18 528 230 34 113 chr18 14896741 14896782 -71092152 - MER58A DNA MER1_type -2196 224 181 2197 94 0 0 chr18 14896782 14897059 -71091875 + AluSx SINE Alu 26 302 -10 528 230 34 113 chr18 14897059 14897077 -71091857 - MER58A DNA MER1_type -2239 181 163 243 0 0 0 chr18 14897077 14897104 -71091830 + (TG)n Simple_repeat Simple_repeat 2 28 0 528 230 34 113 chr18 14897104 14897247 -71091687 - MER58A DNA MER1_type -2257 163 37 293 302 72 29 chr18 14898817 14898956 -71089978 + MIR SINE MIR 20 164 -98 482 297 108 11 chr18 14899011 14899196 -71089738 + MIR SINE MIR 60 262 0 2294 149 30 25 chr18 14899513 14899875 -71089059 + THE1B LTR MaLR 1 364 0 1434 143 49 0 chr18 14900639 14900883 -71088051 + LTR62 LTR ERVK 1 256 -463 392 97 0 16 chr18 14900882 14900944 -71087990 + LTR62 LTR ERVK 369 429 -290 * 1589 244 61 18 chr18 14901096 14901539 -71087395 + LTR40b LTR ERVL 1 462 0 2248 142 0 0 chr18 14901834 14902145 -71086789 - AluSx SINE Alu -1 311 1 1878 156 3 10 chr18 14902248 14902550 -71086384 + AluSq SINE Alu 3 302 -11 1725 31 5 0 chr18 14902561 14902757 -71086177 + L1PA4 LINE L1 5951 6147 -8 405 289 139 34 chr18 14903134 14903268 -71085666 - LTR16A1 LTR ERVL -2 455 336 2394 96 0 0 chr18 14903268 14903569 -71085365 + AluSx SINE Alu 1 301 -11 405 289 139 34 chr18 14903569 14903845 -71085089 - LTR16A1 LTR ERVL -121 336 2 220 333 69 10 chr18 14905850 14905952 -71082982 + L2 LINE L2 3126 3233 -39 2590 162 47 2 chr18 14906739 14907146 -71081788 - MSTA LTR MaLR -3 425 1 246 325 15 86 chr18 14908142 14908339 -71080595 - L2 LINE L2 -56 3216 3034 1345 212 70 28 chr18 14908463 14908822 -71080112 + MLT1A2 LTR MaLR 1 374 0 2144 135 3 0 chr18 14909310 14909622 -71079312 - AluSq SINE Alu 0 313 1 2950 152 22 12 chr18 14909622 14910122 -71078812 - L1PB4 LINE L1 -6 6150 5646 302 275 0 117 chr18 14910123 14910243 -71078691 + L1M4 LINE L1 862 967 -5882 437 250 48 30 chr18 14912535 14912703 -71076231 - MER104 DNA Tc2 -6 174 4 2303 121 0 6 chr18 14912947 14913261 -71075673 + AluSx SINE Alu 1 312 0 23 54 0 0 chr18 14915120 14915157 -71073777 + AT_rich Low_complexity Low_complexity 1 37 0 26 0 0 0 chr18 14915167 14915193 -71073741 + AT_rich Low_complexity Low_complexity 1 26 0 444 292 100 34 chr18 14915490 14916250 -71072684 + L1M4 LINE L1 4392 5211 -1637 282 143 0 0 chr18 14916293 14916335 -71072599 + MLT1I LTR MaLR 368 409 0 180 0 0 0 chr18 14916361 14916381 -71072553 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 1905 134 3 7 chr18 14916383 14916667 -71072267 - AluSx SINE Alu -29 283 1 261 0 0 0 chr18 14916903 14916932 -71072002 + (CAAG)n Simple_repeat Simple_repeat 3 31 0 3874 174 58 15 chr18 14916932 14917650 -71071284 - MER21B LTR ERV1 -114 749 1 328 291 39 16 chr18 14918221 14918348 -71070586 + L2 LINE L2 1341 1470 -1844 389 310 29 57 chr18 14918357 14918638 -71070296 - L1M4 LINE L1 -2452 3694 3422 1136 194 127 37 chr18 14918666 14919067 -71069867 + LTR56 LTR ERV1 9 445 0 333 287 52 43 chr18 14919128 14919476 -71069458 - L1M4 LINE L1 -2739 3407 3057 3372 134 44 11 chr18 14919621 14920172 -71068762 + LTR24B LTR ERV1 1 569 -7 584 342 12 8 chr18 14920172 14920412 -71068522 + LTR24B-int LTR ERV1 1 241 -4882 2201 120 0 0 chr18 14920426 14920727 -71068207 + AluSg SINE Alu 2 302 -8 348 240 0 56 chr18 14920775 14920900 -71068034 + LTR24B-int LTR ERV1 422 539 -4584 285 344 92 40 chr18 14921029 14921279 -71067655 + MER110-int LTR ERV1 417 679 -6079 718 331 76 39 chr18 14923309 14923840 -71065094 + MER110-int LTR ERV1 150 2834 -3967 296 303 65 71 chr18 14924251 14924545 -71064389 + MER110-int LTR ERV1 3226 3517 -3284 1316 58 58 42 chr18 14925392 14925583 -71063351 - L1PB1 LINE L1 -2 6149 5956 467 337 48 44 chr18 14925627 14926040 -71062894 + MER110-int LTR ERV1 2142 2556 -2091 6468 140 37 8 chr18 14926153 14927465 -71061469 - L1MA2 LINE L1 0 7723 6377 1750 160 25 9 chr18 14927473 14927792 -71061142 + THE1C LTR MaLR 52 375 0 9933 158 23 8 chr18 14927831 14929676 -71059258 - L1MA2 LINE L1 -1194 6371 4498 611 256 0 0 chr18 14929676 14929805 -71059129 - FRAM SINE Alu -5 171 43 1266 127 5 0 chr18 14929809 14930269 -71058665 - GSATX Satellite centromeric 0 462 1 651 170 0 0 chr18 14930269 14930363 -71058571 - FLAM_C SINE Alu -15 128 35 4401 181 25 21 chr18 14930365 14931896 -71057038 - L1MA2 LINE L1 -3060 4505 2964 3231 206 25 18 chr18 14931892 14933073 -71055861 - L1MA2 LINE L1 -6770 795 23 * 2216 101 0 7 chr18 14933664 14933961 -71054973 + AluSc SINE Alu 1 295 -14 1687 186 0 17 chr18 14933965 14934261 -71054673 - AluJb SINE Alu -10 302 12 1765 200 53 60 chr18 14934833 14935315 -71053619 + MER66A LTR ERV1 100 478 0 1196 245 60 38 chr18 14935315 14935735 -71053199 - MER65B LTR ERV1 -8 523 95 1060 219 140 54 chr18 14935887 14936407 -71052527 - MER41B LTR ERV1 -8 490 100 3242 173 80 2 chr18 14936773 14937347 -71051587 - LTR31 LTR ERV1 0 619 1 26 0 0 0 chr18 14938967 14938993 -71049941 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr18 14940160 14940182 -71048752 + AT_rich Low_complexity Low_complexity 1 22 0 977 195 0 0 chr18 14940413 14940572 -71048362 - FRAM SINE Alu -3 163 5 2218 122 3 0 chr18 14940961 14941272 -71047662 + AluSx SINE Alu 1 312 0 420 363 32 32 chr18 14941609 14941857 -71047077 + L1MEd LINE L1 1008 1255 -4864 1351 239 63 49 chr18 14942625 14943399 -71045535 - L1M4 LINE L1 -3561 2821 2026 355 268 195 21 chr18 14943529 14943719 -71045215 + MLT1H LTR MaLR 311 533 -16 2558 117 72 2 chr18 14944069 14944487 -71044447 - MER4C LTR ERV1 -18 447 1 1614 235 26 19 chr18 14944771 14945196 -71043738 + L1MC4 LINE L1 7431 7858 -184 21 0 0 0 chr18 14945383 14945404 -71043530 + AT_rich Low_complexity Low_complexity 1 21 0 2307 98 0 0 chr18 14946092 14946388 -71042546 + AluSq SINE Alu 3 298 -15 1109 163 0 0 chr18 14946794 14946972 -71041962 - AluSg/x SINE Alu 0 312 135 804 79 0 0 chr18 14946975 14947076 -71041858 + AluSg SINE Alu 30 130 -180 221 136 0 23 chr18 14947890 14947934 -71041000 + (CA)n Simple_repeat Simple_repeat 2 44 0 590 288 22 78 chr18 14948493 14948812 -71040122 - L2 LINE L2 -819 2495 2195 2440 108 19 11 chr18 14948868 14949229 -71039705 - THE1B LTR MaLR 0 364 1 2453 84 0 0 chr18 14949273 14949581 -71039353 - AluSx SINE Alu -4 308 1 303 309 111 21 chr18 14949658 14949901 -71039033 - LTR33 LTR ERVL -32 489 225 265 115 148 33 chr18 14950721 14950782 -71038152 + MER3 DNA MER1_type 139 206 -3 400 292 119 6 chr18 14951080 14951248 -71037686 + MIR SINE MIR 5 191 -71 2015 113 55 3 chr18 14952749 14953042 -71035892 - AluSc SINE Alu -1 308 1 359 244 33 0 chr18 14953705 14953795 -71035139 + MLT1D-int LTR MaLR 1279 1371 0 2523 166 55 25 chr18 14953795 14954284 -71034650 + MLT1D LTR MaLR 1 504 -1 2404 62 0 33 chr18 14955321 14955628 -71033306 - AluY SINE Alu -14 297 1 1746 151 14 14 chr18 14956345 14956636 -71032298 - AluJb SINE Alu -21 291 1 21 0 0 0 chr18 14957649 14957670 -71031264 + AT_rich Low_complexity Low_complexity 1 21 0 531 176 0 0 chr18 14957783 14957874 -71031060 - L1MC/D LINE L1 -799 5814 5724 1891 118 0 27 chr18 14957875 14958172 -71030762 - Tigger4(Zombi) DNA MER2_type 0 2731 2443 267 184 0 0 chr18 14958195 14958244 -71030690 - Tigger4(Zombi) DNA MER2_type -2125 606 558 8958 230 43 21 chr18 14958244 14960979 -71027955 - L1MC/D LINE L1 -744 5682 2921 394 164 0 0 chr18 14960996 14961069 -71027865 - L1MC/D LINE L1 -3980 2446 2374 1963 80 104 7 chr18 14961070 14961369 -71027565 - L1PA7 LINE L1 -4 6150 5823 3963 152 202 10 chr18 14961573 14962543 -71026391 - L1MC/D LINE L1 -4210 2216 1061 1333 197 180 0 chr18 14962833 14963127 -71025807 + MER7A DNA MER2_type 1 345 -1 680 298 31 0 chr18 14963184 14963412 -71025522 + HERV16 LTR ERVL 1 235 -4761 961 341 51 29 chr18 14963525 14964117 -71024817 + HERV16 LTR ERVL 364 968 -4028 529 297 93 24 chr18 14964127 14964373 -71024561 + HERV16 LTR ERVL 1928 2127 -2869 30 59 0 0 chr18 14965001 14965052 -71023882 + AT_rich Low_complexity Low_complexity 1 51 0 23 54 0 0 chr18 14965384 14965421 -71023513 + AT_rich Low_complexity Low_complexity 1 37 0 521 268 113 0 chr18 14965784 14965952 -71022982 + L1MEc LINE L1 65 251 -6145 2085 233 118 54 chr18 14965964 14966384 -71022550 + L1MEc LINE L1 444 836 -5379 1189 156 9 5 chr18 14966384 14966608 -71022326 + L1MB3 LINE L1 5955 6179 -4 2085 233 118 54 chr18 14966608 14967112 -71021822 + L1MEc LINE L1 836 1398 -4817 183 304 48 48 chr18 14967792 14967917 -71021017 - MIR SINE MIR -50 212 88 277 249 166 65 chr18 14968003 14968232 -71020702 + L2 LINE L2 3004 3255 -58 2156 105 0 10 chr18 14968435 14968730 -71020204 + AluY SINE Alu 1 292 -19 2269 49 11 3 chr18 14968796 14969079 -71019855 - MER4E LTR ERV1 0 766 482 4537 69 10 16 chr18 14969079 14970119 -71018815 - MER11A LTR ERVK 0 1266 1 2621 58 26 24 chr18 14970119 14970449 -71018485 - MER4E LTR ERV1 -280 486 153 2826 96 112 0 chr18 14970449 14970885 -71018049 + LTR19A LTR ERV1 1 485 -1 2621 58 26 24 chr18 14970885 14970933 -71018001 - MER4E LTR ERV1 -613 153 107 10091 71 15 54 chr18 14970933 14972366 -71016568 + SVA Other Other 10 1386 0 771 213 118 28 chr18 14972366 14972653 -71016281 + L1MCa LINE L1 1275 1587 -4839 2548 166 130 30 chr18 14972664 14973164 -71015770 - MER44D DNA MER2_type 0 605 1 2190 235 97 31 chr18 14973166 14973685 -71015249 + L1MCa LINE L1 1691 2174 -4252 186 43 0 0 chr18 14973685 14973708 -71015226 + (GA)n Simple_repeat Simple_repeat 1 23 0 2190 235 97 31 chr18 14973708 14974312 -71014622 + L1MCa LINE L1 2174 2880 -3546 1584 241 46 35 chr18 14974324 14975043 -71013891 + L1MA9 LINE L1 2975 3704 -3861 746 152 0 16 chr18 14975043 14975168 -71013766 + FLAM_C SINE Alu 1 123 -20 26 0 0 0 chr18 14975168 14975194 -71013740 + AT_rich Low_complexity Low_complexity 1 26 0 2555 239 10 6 chr18 14975195 14975868 -71013066 + L1MA9 LINE L1 3690 4365 -3200 1180 152 5 0 chr18 14975890 14976087 -71012847 + L1PB1 LINE L1 3 200 -6663 * 14936 173 57 26 chr18 14976079 14981764 -71007170 + L1PB1 LINE L1 625 6520 -347 273 57 0 0 chr18 14981764 14981799 -71007135 + (TG)n Simple_repeat Simple_repeat 2 36 0 14936 173 57 26 chr18 14981799 14982159 -71006775 + L1PB1 LINE L1 6520 6867 0 10914 179 32 14 chr18 14982136 14984937 -71003997 + L1MA9 LINE L1 4340 7217 -514 * 285 98 0 0 chr18 14984937 14984978 -71003956 + (CA)n Simple_repeat Simple_repeat 2 42 0 10914 179 32 14 chr18 14984978 14985502 -71003432 + L1MA9 LINE L1 7217 7730 -1 1327 252 79 17 chr18 14985504 14987690 -71001244 + L1ME1 LINE L1 3120 5488 -678 3100 174 59 23 chr18 14987696 14988307 -71000627 - MER39 LTR ERV1 0 707 75 1701 237 15 2 chr18 14988335 14988731 -71000203 + L1ME1 LINE L1 5488 5888 -278 2764 231 36 20 chr18 14988736 14988968 -70999966 + L1ME2 LINE L1 5397 5624 -540 2353 82 0 3 chr18 14988968 14989272 -70999662 - AluY SINE Alu -8 303 1 2764 231 36 20 chr18 14989272 14989494 -70999440 + L1ME2 LINE L1 5624 5841 -323 3886 113 68 52 chr18 14989494 14990174 -70998760 - LTR8 LTR ERV1 0 691 1 2764 231 36 20 chr18 14990174 14990458 -70998476 + L1ME2 LINE L1 5841 6148 -16 2271 108 0 3 chr18 14990725 14991030 -70997904 - AluSq SINE Alu -9 304 1 1584 190 52 7 chr18 14991050 14991340 -70997594 - AluJb SINE Alu -9 303 1 1953 97 7 25 chr18 14991702 14991980 -70996954 - AluSx SINE Alu -11 301 29 32 0 0 0 chr18 14992170 14992202 -70996732 + AT_rich Low_complexity Low_complexity 1 32 0 510 266 57 0 chr18 14992250 14992408 -70996526 + LTR68 LTR ERV1 571 737 -3 229 230 71 0 chr18 14992418 14992531 -70996403 - L1M4 LINE L1 -3129 3017 2897 25 31 0 0 chr18 14992542 14992574 -70996360 + AT_rich Low_complexity Low_complexity 1 32 0 428 259 23 27 chr18 14992625 14992815 -70996119 + MER39 LTR ERV1 475 585 0 22 35 0 0 chr18 14992818 14992847 -70996087 + AT_rich Low_complexity Low_complexity 1 29 0 2531 155 65 88 chr18 14994345 14994703 -70994231 - LTR24B LTR ERV1 -9 567 229 1857 107 46 32 chr18 14994703 14995006 -70993928 + AluSx SINE Alu 1 307 0 2531 155 65 88 chr18 14995006 14995230 -70993704 - LTR24B LTR ERV1 -347 229 1 332 150 0 0 chr18 14995397 14995457 -70993477 - L1MB4 LINE L1 -1 6179 6120 2603 184 30 0 chr18 14995457 14995990 -70992944 + MER34C LTR ERV1 37 585 0 1387 146 8 19 chr18 14995990 14996251 -70992683 - L1MB3 LINE L1 -59 6124 5867 467 311 61 0 chr18 14996251 14996431 -70992503 + MER34 LTR ERV1 1 191 -351 1598 144 51 31 chr18 14996436 14996789 -70992145 - THE1C LTR MaLR 0 375 16 679 197 49 7 chr18 14996880 14997060 -70991874 - L1MB3 LINE L1 -315 5868 5683 2454 54 0 3 chr18 14997121 14997418 -70991516 - AluY SINE Alu -15 296 1 29 94 0 0 chr18 14997555 14997640 -70991294 + AT_rich Low_complexity Low_complexity 1 85 0 2343 239 58 42 chr18 14997660 14998623 -70990311 - L1MC4 LINE L1 -63 7979 7001 335 319 52 9 chr18 14998623 14998739 -70990195 - L1M4 LINE L1 -2367 3779 3659 21 0 0 0 chr18 14998958 14998979 -70989955 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 14999065 14999093 -70989841 + AT_rich Low_complexity Low_complexity 1 28 0 410 308 19 42 chr18 14999235 14999495 -70989439 - L1M4 LINE L1 -3139 3007 2754 2405 147 61 16 chr18 15000024 15000466 -70988468 + LTR24 LTR ERV1 6 467 0 1669 168 69 52 chr18 15000544 15000948 -70987986 - MSTC LTR MaLR -17 411 1 211 179 51 0 chr18 15001129 15001168 -70987766 - L2 LINE L2 -16 3256 3216 507 167 10 0 chr18 15001299 15001395 -70987539 + FLAM_A SINE Alu 45 141 -1 404 331 47 17 chr18 15001478 15001650 -70987284 - MER5A DNA MER1_type -6 183 7 2181 137 3 0 chr18 15001897 15002203 -70986731 + AluSx SINE Alu 4 310 -2 23 0 0 0 chr18 15002370 15002393 -70986541 + AT_rich Low_complexity Low_complexity 1 23 0 240 324 141 27 chr18 15002708 15002893 -70986041 + MIR SINE MIR 2 207 -55 1580 151 46 3 chr18 15005444 15005729 -70983205 - AluJo SINE Alu -15 297 1 832 189 0 0 chr18 15008300 15008459 -70980475 - THE1C-int LTR MaLR -848 803 645 454 161 0 11 chr18 15008457 15008544 -70980390 - THE1C-int LTR MaLR -1565 86 1 * 1952 117 57 41 chr18 15008544 15008913 -70980021 - THE1C LTR MaLR 0 375 1 243 313 87 9 chr18 15009292 15009407 -70979527 - L2 LINE L2 -6 3307 3184 181 333 0 0 chr18 15009435 15009486 -70979448 + L2 LINE L2 3145 3195 -77 2447 77 0 7 chr18 15011296 15011606 -70977328 + AluY SINE Alu 1 308 -3 300 48 0 0 chr18 15011618 15011660 -70977274 + AluY SINE Alu 1 42 -261 206 61 0 30 chr18 15011660 15011693 -70977241 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 1392 304 56 16 chr18 15011748 15012445 -70976489 + L1MEc LINE L1 450 1174 -5222 314 344 65 7 chr18 15012447 15012601 -70976333 + L1MEc LINE L1 1173 1335 -4880 1286 236 90 26 chr18 15012616 15013070 -70975864 + L1ME LINE L1 5122 5545 -621 2107 123 7 3 chr18 15013070 15013371 -70975563 + AluSq SINE Alu 1 302 -11 1286 236 90 26 chr18 15013371 15013510 -70975424 + L1ME LINE L1 5545 5674 -492 1274 199 99 22 chr18 15013510 15013872 -70975062 + MLT1B LTR MaLR 1 390 0 1286 236 90 26 chr18 15013872 15013940 -70974994 + L1ME LINE L1 5674 5812 -354 416 302 71 54 chr18 15014020 15014315 -70974619 - L1ME1 LINE L1 -52 6114 5815 394 272 60 33 chr18 15015063 15015247 -70973687 - MIR3 SINE MIR -4 204 16 202 303 0 61 chr18 15015921 15016020 -70972914 - MIR SINE MIR -62 200 108 411 300 36 21 chr18 15017508 15017648 -70971286 + MIR SINE MIR 2 143 -119 610 273 28 94 chr18 15019032 15019466 -70969468 - MLT1J LTR MaLR -18 493 52 1116 256 28 13 chr18 15019544 15019942 -70968992 + L1ME3A LINE L1 4659 5062 -1084 1609 259 123 13 chr18 15020001 15020776 -70968158 + L1PBa LINE L1 13 872 -5991 2057 160 32 3 chr18 15022781 15023157 -70965777 + L1PA16 LINE L1 5780 6166 0 22 35 0 0 chr18 15023330 15023359 -70965575 + AT_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr18 15023439 15023483 -70965451 + AT_rich Low_complexity Low_complexity 1 44 0 378 298 41 40 chr18 15023888 15024070 -70964864 + L1ME3A LINE L1 5763 5939 -227 35 54 0 0 chr18 15024694 15024750 -70964184 + AT_rich Low_complexity Low_complexity 1 56 0 785 188 0 0 chr18 15025021 15025154 -70963780 + FLAM_C SINE Alu 1 133 0 34 0 0 0 chr18 15025154 15025188 -70963746 + AT_rich Low_complexity Low_complexity 1 34 0 1294 191 6 98 chr18 15025192 15025517 -70963417 + AluJo SINE Alu 1 295 -17 1003 162 13 0 chr18 15025909 15026063 -70962871 - AluJb SINE Alu -20 292 137 1847 226 29 7 chr18 15026209 15026617 -70962317 + MER54A LTR ERVL 484 900 -1 23 54 0 0 chr18 15028205 15028242 -70960692 + AT_rich Low_complexity Low_complexity 1 37 0 664 282 48 61 chr18 15028284 15028724 -70960210 + ERVL LTR ERVL 2451 2884 -2880 507 288 24 12 chr18 15028965 15029135 -70959799 + ERVL LTR ERVL 3168 3339 -2146 949 263 86 68 chr18 15029183 15030057 -70958877 + L1ME LINE L1 237 1166 -5049 2165 161 75 0 chr18 15030057 15030455 -70958479 + MSTC LTR MaLR 1 428 0 949 263 86 68 chr18 15030455 15031045 -70957889 + L1ME LINE L1 1166 1744 -4471 431 287 161 8 chr18 15031142 15031403 -70957531 + L1ME LINE L1 1960 2260 -4136 535 312 75 0 chr18 15031433 15031821 -70957113 + L1ME LINE L1 2205 2621 -3594 272 218 0 0 chr18 15031821 15031876 -70957058 - MER58 DNA MER1_type -1 2419 2365 799 271 74 17 chr18 15031956 15032377 -70956557 + L1ME LINE L1 2630 3074 -3141 206 236 36 0 chr18 15032511 15032566 -70956368 + L2 LINE L2 3216 3272 0 26 0 0 0 chr18 15032773 15032799 -70956135 + AT_rich Low_complexity Low_complexity 1 26 0 2402 118 0 0 chr18 15033053 15033366 -70955568 - AluSq SINE Alu 0 313 1 298 309 121 34 chr18 15033718 15033867 -70955067 + L2 LINE L2 2923 3084 -188 2282 98 0 0 chr18 15033910 15034205 -70954729 - AluSc SINE Alu -14 295 1 950 208 194 59 chr18 15036531 15036868 -70952066 - MLT1D LTR MaLR -2 503 90 2121 82 11 0 chr18 15036868 15037137 -70951797 + AluSg1 SINE Alu 21 292 -17 950 208 194 59 chr18 15037137 15037242 -70951692 - MLT1D LTR MaLR -415 90 1 1375 185 54 67 chr18 15037300 15037673 -70951261 - MLT1A2 LTR MaLR -6 368 1 373 246 8 8 chr18 15040613 15040743 -70948191 + CT-rich Low_complexity Low_complexity 2 131 0 245 269 51 39 chr18 15040868 15040946 -70947988 + MIR SINE MIR 154 232 -30 1292 245 68 25 chr18 15041095 15041596 -70947338 - MER73 LTR ERVL -24 620 104 227 296 14 0 chr18 15042959 15043030 -70945904 + L2 LINE L2 3242 3313 0 759 274 79 70 chr18 15043510 15043926 -70945008 - LTR16C LTR ERVL -8 483 64 1903 130 30 0 chr18 15045342 15045611 -70943323 + AluSx SINE Alu 1 277 -35 186 43 0 0 chr18 15045611 15045634 -70943300 + (TAAAA)n Simple_repeat Simple_repeat 5 27 0 24 0 0 0 chr18 15046091 15046115 -70942819 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr18 15046266 15046292 -70942642 + AT_rich Low_complexity Low_complexity 1 26 0 14533 128 31 11 chr18 15046977 15047095 -70941839 - Tigger1 DNA MER2_type 0 2418 2304 1739 38 85 4 chr18 15047095 15047330 -70941604 + L1PA5 LINE L1 5901 6154 0 14533 128 31 11 chr18 15047330 15048294 -70940640 - Tigger1 DNA MER2_type -114 2304 1361 3234 92 20 4 chr18 15048294 15048753 -70940181 - L1PA10 LINE L1 -7 6161 5696 14533 128 31 11 chr18 15048753 15050018 -70938916 - Tigger1 DNA MER2_type -1057 1361 23 307 278 78 0 chr18 15050737 15050827 -70938107 - MIR3 SINE MIR -15 193 97 189 107 0 0 chr18 15051267 15051295 -70937639 + (CA)n Simple_repeat Simple_repeat 2 29 0 3392 249 100 59 chr18 15051894 15053630 -70935304 - L1ME1 LINE L1 -48 6118 4225 2232 84 0 19 chr18 15053630 15053940 -70934994 + AluY SINE Alu 1 304 -7 3392 249 100 59 chr18 15053940 15054926 -70934008 - L1ME1 LINE L1 -1941 4225 3281 529 191 111 30 chr18 15054931 15055130 -70933804 - L1ME1 LINE L1 -3037 3109 2895 980 136 0 0 chr18 15055131 15055271 -70933663 - AluYb8 SINE Alu -178 140 1 1120 256 101 12 chr18 15055272 15055776 -70933158 - L1ME1 LINE L1 -3413 2733 2185 5440 222 40 74 chr18 15056276 15057768 -70931166 + L1 LINE L1 1 1441 -5408 1616 133 8 0 chr18 15057765 15058029 -70930905 - L1P4 LINE L1 -581 5582 5317 * 845 163 84 9 chr18 15058030 15058245 -70930689 + L1 LINE L1 1812 2042 -4807 * 1788 172 15 3 chr18 15058241 15058578 -70930356 + L1PA15-16 LINE L1 2499 2839 -4010 2718 185 55 48 chr18 15058579 15059743 -70929191 - LTR12 LTR ERV1 -133 1523 5 9835 237 24 23 chr18 15059743 15062603 -70926331 + L1 LINE L1 2835 5695 -1153 * 13884 189 29 11 chr18 15062600 15066273 -70922661 + L1MA4A LINE L1 2742 6490 -515 1718 150 17 22 chr18 15066273 15066620 -70922314 - MER4A LTR ERV1 0 664 261 731 70 0 20 chr18 15066620 15066720 -70922214 - MER4A LTR ERV1 -566 98 1 3101 124 16 12 chr18 15066720 15067234 -70921700 + L1MA4A LINE L1 6485 7000 -5 889 200 50 34 chr18 15068015 15068454 -70920480 - MLT1F1 LTR MaLR 0 567 7 266 272 87 33 chr18 15068875 15069059 -70919875 - MER21-int LTR ERV1 -1942 2249 2056 * 276 331 8 0 chr18 15068982 15069103 -70919831 - MERVL LTR ERVL -2078 3407 3286 281 228 0 0 chr18 15069246 15069303 -70919631 - L1MEc LINE L1 -4320 2243 2187 386 89 0 0 chr18 15069535 15069591 -70919343 - AluSc SINE Alu -6 293 238 886 305 60 13 chr18 15069612 15070149 -70918785 - L1MEc LINE L1 -4703 1681 1120 273 300 125 3 chr18 15070464 15070767 -70918167 - L1MEc LINE L1 -4657 1653 1314 26 30 0 0 chr18 15070893 15070926 -70918008 + AT_rich Low_complexity Low_complexity 1 33 0 3686 61 0 2 chr18 15070930 15071402 -70917532 - L1PA5 LINE L1 0 6154 5684 284 307 126 24 chr18 15071410 15071902 -70917032 - L1MEc LINE L1 -5005 1114 573 326 240 19 39 chr18 15071914 15072068 -70916866 - L1ME LINE L1 -2989 3091 2941 1855 119 0 0 chr18 15072069 15072347 -70916587 - L1P LINE L1 -3251 2895 2618 1570 241 67 87 chr18 15072351 15072468 -70916466 - L1ME LINE L1 -3141 2939 2821 2134 104 0 0 chr18 15072468 15072747 -70916187 - AluSc SINE Alu -30 279 1 1570 241 67 87 chr18 15072747 15073457 -70915477 - L1ME LINE L1 -3259 2821 2183 2798 13 0 0 chr18 15073457 15073762 -70915172 - AluYa5 SINE Alu -5 306 2 1570 241 67 87 chr18 15073762 15074257 -70914677 - L1ME LINE L1 -3897 2183 1680 3778 174 30 3 chr18 15074269 15074903 -70914031 + L1PA15-16 LINE L1 6 656 -6193 * 9074 220 36 7 chr18 15074899 15077173 -70911761 + L1 LINE L1 2994 5332 -814 752 136 0 0 chr18 15077173 15077307 -70911627 + AluSc SINE Alu 174 307 0 5414 116 16 1 chr18 15077310 15078128 -70910806 + L1PA16 LINE L1 5327 6156 -10 616 171 24 0 chr18 15078141 15078264 -70910670 - L1MB8 LINE L1 -6 6172 6047 613 257 127 73 chr18 15078282 15079344 -70909590 - L1ME LINE L1 -4443 1637 544 612 315 30 68 chr18 15079630 15080059 -70908875 - L1ME LINE L1 -5645 425 13 765 286 69 43 chr18 15080101 15080405 -70908529 - L1MEd LINE L1 -5571 548 237 586 340 201 7 chr18 15080450 15081017 -70907917 + L2 LINE L2 2234 2910 -404 1320 247 12 12 chr18 15081376 15081700 -70907234 - MER58B DNA MER1_type -3 338 15 242 314 196 24 chr18 15082376 15082631 -70906303 - L2 LINE L2 -17 3296 2998 3168 49 10 0 chr18 15082847 15083252 -70905682 + L1PA4 LINE L1 5743 6151 -4 21 71 0 0 chr18 15083672 15083714 -70905220 + AT_rich Low_complexity Low_complexity 1 42 0 295 310 26 26 chr18 15084367 15084480 -70904454 + MIR SINE MIR 18 130 -78 391 35 12 176 chr18 15084539 15084624 -70904310 - MADE1 DNA Mariner -4 76 6 2016 140 0 26 chr18 15084739 15085046 -70903888 - AluJo SINE Alu -13 299 1 1720 152 26 10 chr18 15085130 15085432 -70903502 + MER44D DNA MER2_type 33 609 0 22 0 0 0 chr18 15085509 15085531 -70903403 + AT_rich Low_complexity Low_complexity 1 22 0 27 49 0 0 chr18 15086881 15086922 -70902012 + AT_rich Low_complexity Low_complexity 1 41 0 3038 247 33 4 chr18 15086925 15088451 -70900483 - L1MD1 LINE L1 0 6636 5013 249 247 27 68 chr18 15088440 15088586 -70900348 + L1M4 LINE L1 2393 2532 -3614 * 301 206 123 0 chr18 15088623 15088696 -70900238 - L1MD1 LINE L1 -1552 4988 4907 * 7410 189 106 102 chr18 15088695 15088964 -70899970 - L1MD1 LINE L1 -3901 2639 2372 522 0 0 0 chr18 15088964 15089022 -70899912 + (TA)n Simple_repeat Simple_repeat 2 59 0 7410 189 106 102 chr18 15089022 15089265 -70899669 - L1MD1 LINE L1 -4168 2372 2131 1713 169 110 13 chr18 15089265 15089655 -70899279 + MSTA LTR MaLR 1 428 0 7410 189 106 102 chr18 15089655 15090087 -70898847 - L1MD1 LINE L1 -4409 2131 1702 1084 173 0 0 chr18 15090087 15090249 -70898685 + FRAM SINE Alu 1 158 -18 7410 189 106 102 chr18 15090249 15090356 -70898578 - L1MD1 LINE L1 -4838 1702 1597 1580 186 0 47 chr18 15090356 15090674 -70898260 + AluJo SINE Alu 1 303 -9 7410 189 106 102 chr18 15090674 15092070 -70896864 - L1MD1 LINE L1 -4943 1597 19 200 146 0 83 chr18 15092522 15092570 -70896364 + (GGAA)n Simple_repeat Simple_repeat 1 44 0 446 250 36 7 chr18 15094972 15095112 -70893822 - L1ME1 LINE L1 -5 6161 6018 1594 215 18 21 chr18 15095113 15095494 -70893440 + L1MD3 LINE L1 7553 7932 -63 755 240 66 99 chr18 15095496 15095921 -70893013 - MLT1E LTR MaLR -62 531 121 1867 146 42 3 chr18 15095976 15096098 -70892836 + AluJo SINE Alu 1 117 -195 222 37 0 0 chr18 15096098 15096125 -70892809 + (TAA)n Simple_repeat Simple_repeat 2 28 0 1867 146 42 3 chr18 15096125 15096290 -70892644 + AluJo SINE Alu 117 299 -13 219 308 26 26 chr18 15096462 15096540 -70892394 - MIR SINE MIR -86 122 45 2007 162 131 13 chr18 15096784 15097167 -70891767 - MSTA LTR MaLR 0 428 1 206 61 0 30 chr18 15097508 15097541 -70891393 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 185 250 0 0 chr18 15098238 15098274 -70890660 - MIR3 SINE MIR -15 193 158 2524 58 0 0 chr18 15098386 15098681 -70890253 - AluY SINE Alu -16 295 1 43 85 0 0 chr18 15099877 15099983 -70888951 + AT_rich Low_complexity Low_complexity 1 106 0 235 180 20 0 chr18 15099986 15100036 -70888898 + Charlie1a DNA MER1_type 79 129 -1326 32351 110 11 55 chr18 15100054 15101996 -70886938 - L1PA7 LINE L1 0 6154 4127 1467 115 19 0 chr18 15101996 15102177 -70886757 - AluY SINE Alu -1 310 123 315 0 0 0 chr18 15102177 15102212 -70886722 + (TG)n Simple_repeat Simple_repeat 2 36 0 1467 115 19 0 chr18 15102212 15102239 -70886695 - AluY SINE Alu -188 123 98 32351 110 11 55 chr18 15102239 15106770 -70882164 - L1PA7 LINE L1 -2027 4127 9 4895 186 71 79 chr18 15106778 15108132 -70880802 + Charlie1a DNA MER1_type 113 1455 0 372 275 50 31 chr18 15111089 15111249 -70877685 + MIR SINE MIR 87 249 -13 346 199 33 73 chr18 15111454 15111505 -70877429 + MER103 DNA DNA 3 54 -112 2522 54 0 6 chr18 15111505 15111818 -70877116 + AluY SINE Alu 1 311 0 346 199 33 73 chr18 15111818 15111917 -70877017 + MER103 DNA DNA 54 147 -19 414 277 0 51 chr18 15112909 15113046 -70875888 - L2 LINE L2 -12 3301 3172 240 35 0 0 chr18 15113237 15113266 -70875668 + (TG)n Simple_repeat Simple_repeat 1 29 0 1911 237 85 106 chr18 15114031 15114634 -70874300 + MLT1G LTR MaLR 6 590 0 737 130 43 0 chr18 15115978 15116093 -70872841 - AluSg/x SINE Alu -18 294 175 461 180 5 3 chr18 15116095 15116177 -70872757 - AluJ/FLAM SINE Alu -233 69 5 714 272 25 16 chr18 15116419 15116662 -70872272 - LTR16A1 LTR ERVL 0 457 213 183 42 0 0 chr18 15116664 15116688 -70872246 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 190 364 148 11 chr18 15117919 15118007 -70870927 - MIR SINE MIR -93 115 16 792 311 86 22 chr18 15118173 15118578 -70870356 - L3 LINE CR1 -3 1574 1144 508 264 42 100 chr18 15119352 15119682 -70869252 + LTR16A LTR ERVL 139 449 -1 297 0 0 0 chr18 15119682 15119715 -70869219 + (TG)n Simple_repeat Simple_repeat 1 33 0 488 30 0 15 chr18 15119715 15119782 -70869152 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 606 208 64 8 chr18 15119830 15119955 -70868979 + MER2 DNA MER2_type 2 133 -212 1290 158 15 0 chr18 15120232 15120434 -70868500 + MER2 DNA MER2_type 139 343 -2 374 328 109 0 chr18 15120825 15121008 -70867926 + MIR3 SINE MIR 4 206 -2 219 316 0 13 chr18 15121169 15121248 -70867686 + L2 LINE L2 3195 3272 0 224 261 228 0 chr18 15121834 15121926 -70867008 + MIR SINE MIR 124 236 -26 335 344 70 0 chr18 15122545 15122702 -70866232 + HERVL LTR ERVL 5159 5326 -328 252 218 11 46 chr18 15123889 15123976 -70864958 - MIR SINE MIR -33 229 146 218 119 24 0 chr18 15124957 15124999 -70863935 + A-rich Low_complexity Low_complexity 3 45 0 2230 118 80 9 chr18 15125031 15125369 -70863565 + THE1B LTR MaLR 1 362 -2 1077 298 116 65 chr18 15125796 15127110 -70861824 + L2 LINE L2 1873 3256 -16 22 35 0 0 chr18 15127732 15127761 -70861173 + AT_rich Low_complexity Low_complexity 1 29 0 237 241 36 109 chr18 15128303 15128440 -70860494 - MIR SINE MIR -113 149 23 * 618 355 31 0 chr18 15128404 15128632 -70860302 + MIR SINE MIR 10 244 -18 431 282 1 32 chr18 15128624 15128769 -70860165 - MER5A DNA MER1_type -5 184 33 * 24 0 0 0 chr18 15130386 15130410 -70858524 + AT_rich Low_complexity Low_complexity 1 24 0 203 161 18 36 chr18 15130457 15130513 -70858421 + (CATATA)n Simple_repeat Simple_repeat 3 57 0 962 141 120 33 chr18 15130970 15131154 -70857780 + L1PB4 LINE L1 5945 6144 -12 1865 160 7 0 chr18 15132203 15132496 -70856438 - AluJo SINE Alu -16 296 2 2541 61 0 0 chr18 15134370 15134666 -70854268 - AluY SINE Alu -15 296 1 5126 225 76 40 chr18 15134672 15136626 -70852308 + L1ME1 LINE L1 3550 5616 -550 1818 147 6 39 chr18 15136626 15136938 -70851996 + AluJb SINE Alu 1 302 -10 5126 225 76 40 chr18 15136938 15137501 -70851433 + L1ME1 LINE L1 5616 6157 -9 568 256 40 68 chr18 15137511 15137761 -70851173 + L2 LINE L2 3027 3269 -44 2487 43 0 0 chr18 15137827 15138144 -70850790 - AluY SINE Alu 0 317 1 312 299 103 0 chr18 15138228 15138325 -70850609 + MIR3 SINE MIR 67 173 -35 271 147 15 15 chr18 15142878 15142919 -70846015 + GA-rich Low_complexity Low_complexity 1 44 -24 2087 128 3 6 chr18 15142919 15143231 -70845703 + AluSx SINE Alu 1 311 -1 271 147 15 15 chr18 15143231 15143257 -70845677 + GA-rich Low_complexity Low_complexity 43 68 0 667 273 71 6 chr18 15144688 15144871 -70844063 + MER58A DNA MER1_type 27 221 -3 24 0 0 0 chr18 15146827 15146851 -70842083 + AT_rich Low_complexity Low_complexity 1 24 0 28 0 0 0 chr18 15146866 15146894 -70842040 + AT_rich Low_complexity Low_complexity 1 28 0 1914 142 7 3 chr18 15146900 15147188 -70841746 - AluSc SINE Alu -20 289 1 313 283 83 8 chr18 15151051 15151171 -70837763 + L2 LINE L2 3140 3268 -4 195 284 37 12 chr18 15151516 15151597 -70837337 - MIR SINE MIR -117 145 63 1622 172 39 18 chr18 15152246 15152531 -70836403 + AluJo SINE Alu 1 291 -21 23 0 0 0 chr18 15153245 15153268 -70835666 + AT_rich Low_complexity Low_complexity 1 23 0 1593 164 98 4 chr18 15153338 15153613 -70835321 - AluJo SINE Alu -11 301 1 1013 161 6 0 chr18 15153979 15154147 -70834787 + FRAM SINE Alu 1 169 -7 320 274 165 59 chr18 15154334 15154673 -70834261 + LTR16A LTR ERVL 76 450 0 443 320 93 27 chr18 15155112 15155412 -70833522 + ERVL LTR ERVL 490 809 -4187 940 271 53 5 chr18 15155442 15155892 -70833042 + MLT1H1 LTR MaLR 4 517 -38 322 313 47 20 chr18 15155924 15156074 -70832860 + ERVL LTR ERVL 873 1026 -3970 348 338 51 25 chr18 15156288 15156525 -70832409 + ERVL LTR ERVL 4311 4553 -1211 274 343 154 13 chr18 15156941 15157041 -70831893 + L2 LINE L2 3048 3132 -181 312 27 0 0 chr18 15157041 15157078 -70831856 + (TC)n Simple_repeat Simple_repeat 2 38 0 274 343 154 13 chr18 15157078 15157210 -70831724 + L2 LINE L2 3132 3313 0 246 215 51 25 chr18 15157495 15157574 -70831360 + MIR SINE MIR 72 152 -110 4094 128 47 10 chr18 15158727 15159408 -70829526 - Tigger3(Golem) DNA MER2_type 0 3029 2324 1015 181 6 6 chr18 15159494 15159671 -70829263 - Tigger3(Golem) DNA MER2_type -2799 230 54 552 138 84 48 chr18 15159671 15159838 -70829096 + L1M1 LINE L1 3366 3538 -4027 525 259 110 47 chr18 15159875 15160576 -70828358 + HSREP522 Satellite telomeric 1 745 -1 1812 122 0 8 chr18 15161872 15162126 -70826808 - AluSx SINE Alu -15 297 46 210 37 0 0 chr18 15162170 15162197 -70826737 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 220 229 36 24 chr18 15162275 15162358 -70826576 + CT-rich Low_complexity Low_complexity 1 84 0 931 70 0 0 chr18 15163234 15163349 -70825585 - MER11C LTR ERVK 0 1071 957 8638 54 24 2 chr18 15163357 15164405 -70824529 - MER11C LTR ERVK 0 1071 1 1508 155 25 22 chr18 15164734 15165012 -70823922 + HUERS-P1 LTR ERV1 2076 2354 -3592 717 166 30 24 chr18 15165011 15165180 -70823754 + HUERS-P1 LTR ERV1 1839 2008 -6112 * 7358 187 94 80 chr18 15165169 15165654 -70823280 + HUERS-P1 LTR ERV1 2715 3192 -3136 306 73 0 0 chr18 15165654 15165695 -70823239 + (CA)n Simple_repeat Simple_repeat 2 42 0 7358 187 94 80 chr18 15165695 15166816 -70822118 + HUERS-P1 LTR ERV1 3192 4296 -2032 1972 155 0 0 chr18 15166816 15167100 -70821834 + AluSx SINE Alu 5 288 -24 7358 187 94 80 chr18 15167100 15167792 -70821142 + HUERS-P1 LTR ERV1 4296 4977 -1351 2236 91 0 17 chr18 15167792 15168090 -70820844 + AluSg SINE Alu 1 293 -17 7358 187 94 80 chr18 15168090 15168445 -70820489 + HUERS-P1 LTR ERV1 4977 5804 -524 751 181 29 7 chr18 15168505 15168643 -70820291 + HUERS-P1 LTR ERV1 6083 6223 -108 292 247 118 0 chr18 15168745 15168830 -70820104 + HUERS-P1 LTR ERV1 5954 6048 -215 383 288 88 6 chr18 15169159 15169329 -70819605 - MIR SINE MIR -31 231 48 2469 77 0 0 chr18 15169407 15169718 -70819216 + AluY SINE Alu 1 311 0 306 264 0 47 chr18 15169821 15169836 -70819098 + HsTC2 DNA Tc2 1798 1812 -86 1627 117 5 5 chr18 15169836 15170058 -70818876 - AluSx SINE Alu -90 222 1 306 264 0 47 chr18 15170058 15170148 -70818786 + HsTC2 DNA Tc2 1812 1898 0 28 0 0 0 chr18 15170720 15170748 -70818186 + AT_rich Low_complexity Low_complexity 1 28 0 715 179 86 130 chr18 15171467 15171836 -70817098 - LTR61 LTR ERV1 -4 591 101 34090 241 26 20 chr18 15171938 15179622 -70809312 - HERV3 LTR ERV1 0 8426 702 729 219 12 19 chr18 15180101 15180261 -70808673 - MER58A DNA MER1_type -26 198 40 258 217 96 12 chr18 15180412 15180495 -70808439 + MER103 DNA DNA 26 115 -51 6241 139 22 57 chr18 15181604 15182739 -70806195 - Tigger7 DNA MER2_type -1 2486 1392 6148 150 69 16 chr18 15182739 15183908 -70805026 - Tigger3b DNA MER2_type 0 1231 1 290 235 41 10 chr18 15183909 15184007 -70804927 + MIR SINE MIR 107 207 -55 342 0 0 0 chr18 15184351 15184389 -70804545 + (CA)n Simple_repeat Simple_repeat 1 38 0 2334 74 10 10 chr18 15184601 15184910 -70804024 - AluY SINE Alu -2 309 1 830 267 87 38 chr18 15184954 15185482 -70803452 - MLT1G1 LTR MaLR 0 555 1 227 237 0 79 chr18 15185561 15185637 -70803297 - L2 LINE L2 0 3272 3203 640 265 63 13 chr18 15185740 15185978 -70802956 + MIR SINE MIR 13 262 0 514 286 13 39 chr18 15186794 15186941 -70801993 - MIR SINE MIR -21 241 102 2378 49 42 0 chr18 15186941 15187225 -70801709 + AluY SINE Alu 1 296 -15 514 286 13 39 chr18 15187225 15187303 -70801631 - MIR SINE MIR -160 102 23 2647 142 34 0 chr18 15187581 15187989 -70800945 - MSTB LTR MaLR -4 422 1 207 0 0 0 chr18 15188349 15188372 -70800562 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 225 341 119 0 chr18 15188525 15188651 -70800283 - MIR3 SINE MIR -3 205 65 213 286 0 14 chr18 15189101 15189171 -70799763 - MIR3 SINE MIR 0 208 140 203 331 134 0 chr18 15189708 15189850 -70799084 + MIR3 SINE MIR 42 202 -6 1303 236 103 21 chr18 15191019 15191486 -70797448 + MLT1D LTR MaLR 1 505 0 195 129 0 0 chr18 15192888 15192919 -70796015 + (CA)n Simple_repeat Simple_repeat 2 32 0 1405 157 172 35 chr18 15193414 15193757 -70795177 + MLT1B LTR MaLR 1 390 0 191 114 29 0 chr18 15194837 15194872 -70794062 + GA-rich Low_complexity Low_complexity 4 39 0 912 127 0 8 chr18 15195018 15195152 -70793782 + AluJb SINE Alu 158 290 -22 794 123 19 7 chr18 15195152 15195306 -70793628 + GA-rich Low_complexity Low_complexity 2 157 0 745 117 0 29 chr18 15195315 15195452 -70793482 + L1MA2 LINE L1 6172 6304 0 405 0 0 0 chr18 15196478 15196523 -70792411 + (TAAAAA)n Simple_repeat Simple_repeat 1 45 0 2398 72 0 0 chr18 15196783 15197087 -70791847 + AluY SINE Alu 1 304 -7 911 168 0 12 chr18 15198330 15198497 -70790437 - FRAM SINE Alu -12 164 1 2138 105 7 3 chr18 15198731 15199037 -70789897 + AluSx SINE Alu 1 307 -5 351 240 50 58 chr18 15199108 15199229 -70789705 + MIR SINE MIR 23 142 -66 701 188 54 16 chr18 15199790 15199976 -70788958 + Charlie5 DNA MER1_type 2393 2585 -27 189 0 0 0 chr18 15200430 15200451 -70788483 + (A)n Simple_repeat Simple_repeat 1 21 0 351 240 50 58 chr18 15200521 15200642 -70788292 + MIR SINE MIR 23 142 -66 701 188 54 16 chr18 15201204 15201390 -70787544 + Charlie5 DNA MER1_type 2432 2624 0 234 0 0 0 chr18 15202713 15202739 -70786195 + (TAA)n Simple_repeat Simple_repeat 2 27 0 524 314 116 24 chr18 15202761 15203356 -70785578 + L1M4 LINE L1 3548 4197 -1949 587 216 0 7 chr18 15203363 15203511 -70785423 + GA-rich Low_complexity Low_complexity 4 150 0 699 317 64 46 chr18 15203529 15204046 -70784888 + L1M4 LINE L1 4143 4668 -1478 349 315 62 11 chr18 15204439 15204657 -70784277 + L1ME LINE L1 3473 3698 -2448 279 314 77 42 chr18 15204665 15204926 -70784008 + L1ME LINE L1 5265 5534 -587 2170 272 89 20 chr18 15205027 15205986 -70782948 + L1M4 LINE L1 3095 4119 -2027 449 295 108 6 chr18 15207304 15207470 -70781464 - MIR SINE MIR -60 202 20 428 260 20 0 chr18 15207870 15207970 -70780964 + MER5A DNA MER1_type 1 102 -87 259 254 14 14 chr18 15209261 15209332 -70779602 + MER110-int LTR ERV1 1225 1295 -5506 2171 152 75 0 chr18 15209995 15210370 -70778564 - MER57A LTR ERV1 0 403 1 854 148 0 28 chr18 15210381 15210523 -70778411 + AluJo SINE Alu 2 139 -173 210 153 34 17 chr18 15210770 15210829 -70778105 + (TA)n Simple_repeat Simple_repeat 1 60 0 396 318 48 47 chr18 15211350 15211659 -70777275 + MER110-int LTR ERV1 825 3271 -3530 357 336 0 10 chr18 15212798 15212902 -70776032 + MER110-int LTR ERV1 2277 2379 -2268 705 137 7 41 chr18 15212933 15213079 -70775855 - AluSg/x SINE Alu -30 279 139 315 71 0 0 chr18 15213232 15213274 -70775660 + (A)n Simple_repeat Simple_repeat 1 42 0 1019 71 0 0 chr18 15213281 15213407 -70775527 + AluSc SINE Alu 9 134 -175 2259 101 0 0 chr18 15213407 15213715 -70775219 + AluY SINE Alu 1 308 -3 608 184 92 96 chr18 15213715 15213947 -70774987 - MER4-int LTR ERV1 -1768 4563 4331 1848 141 14 0 chr18 15213947 15214237 -70774697 - AluSx SINE Alu -18 294 1 608 184 92 96 chr18 15214237 15214265 -70774669 - MER4-int LTR ERV1 -2000 4331 4304 542 188 76 176 chr18 15214258 15214679 -70774255 - MER4-int LTR ERV1 -1993 2943 2679 * 281 134 0 30 chr18 15214747 15214814 -70774120 - MER4-int LTR ERV1 -2807 3791 3727 497 319 70 22 chr18 15215001 15215230 -70773704 + MIR SINE MIR 23 262 0 418 298 26 0 chr18 15215238 15215352 -70773582 + L2 LINE L2 3193 3309 -4 617 297 12 0 chr18 15216189 15216354 -70772580 - MIR SINE MIR -68 194 28 255 323 16 40 chr18 15216356 15216480 -70772454 - L2 LINE L2 0 3313 3193 300 330 69 16 chr18 15216581 15216769 -70772165 - MIR SINE MIR -54 208 11 1948 146 7 0 chr18 15217290 15217585 -70771349 + AluSx SINE Alu 1 297 -15 477 0 0 0 chr18 15217900 15217953 -70770981 + (CA)n Simple_repeat Simple_repeat 2 54 0 615 255 18 58 chr18 15217984 15218262 -70770672 - AluSg1 SINE Alu -40 269 3 609 258 74 37 chr18 15218461 15218678 -70770256 - MIR SINE MIR -17 245 21 755 299 34 19 chr18 15218731 15219052 -70769882 - MLT1I LTR MaLR -10 399 74 2291 83 6 16 chr18 15220606 15220919 -70768015 - AluSg SINE Alu 0 310 1 2144 103 3 6 chr18 15220986 15221297 -70767637 - AluSg SINE Alu 0 310 1 290 284 7 28 chr18 15221299 15221440 -70767494 - MER113 DNA MER1_type? -290 231 94 383 340 93 25 chr18 15221930 15222209 -70766725 - L1 LINE L1 -3182 2964 2667 218 171 0 0 chr18 15222847 15222882 -70766052 + CT-rich Low_complexity Low_complexity 1 35 0 229 156 78 0 chr18 15222897 15222961 -70765973 + CT-rich Low_complexity Low_complexity 5 73 0 1124 119 15 20 chr18 15223087 15223289 -70765645 - AluSc SINE Alu -108 201 1 5487 114 16 37 chr18 15223344 15224178 -70764756 + MER50-int LTR ERV1 6382 7197 -8 3959 138 60 26 chr18 15224178 15224632 -70764302 + MER50 LTR ERV1 1 488 -246 1848 96 20 55 chr18 15224632 15224947 -70763987 + AluSx SINE Alu 1 305 0 3959 138 60 26 chr18 15224947 15225174 -70763760 + MER50 LTR ERV1 488 706 -28 2360 96 77 8 chr18 15225292 15225645 -70763289 + MER51B LTR ERV1 1 377 0 2569 166 68 40 chr18 15226001 15226573 -70762361 - LTR49 LTR ERV1 -7 588 1 3284 117 34 2 chr18 15226657 15227155 -70761779 + MER75 DNA T2_type 1 514 0 562 256 31 44 chr18 15227244 15227404 -70761530 + MER110-int LTR ERV1 3761 3918 -729 1920 105 0 48 chr18 15227533 15227827 -70761107 + AluSq SINE Alu 1 280 -33 4014 116 22 7 chr18 15227827 15228422 -70760512 - MER4D LTR ERV1 -299 604 1 497 215 89 15 chr18 15228422 15228557 -70760377 + MER110-int LTR ERV1 4451 4595 -52 2161 108 3 0 chr18 15228907 15229213 -70759721 - AluSc SINE Alu -2 307 1 1979 124 13 7 chr18 15229591 15229897 -70759037 + AluSx SINE Alu 1 308 -4 1164 183 12 1 chr18 15230384 15230603 -70758331 - L1PA10 LINE L1 -325 5843 5621 4354 110 42 28 chr18 15230741 15231906 -70757028 + SVA Other Other 432 1170 -216 818 236 92 18 chr18 15231918 15232202 -70756732 + L1ME2 LINE L1 5811 6115 -49 427 272 27 14 chr18 15232101 15232248 -70756686 + L1MA10 LINE L1 6176 6324 -10 * 224 157 20 0 chr18 15232627 15232678 -70756256 + T-rich Low_complexity Low_complexity 5 56 0 344 263 86 43 chr18 15232685 15232894 -70756040 + L1ME3A LINE L1 5743 5960 -210 1908 234 78 21 chr18 15233295 15233808 -70755126 + MLT1F LTR MaLR 1 542 0 505 273 25 20 chr18 15233808 15234006 -70754928 + MLT1F-int LTR MaLR 3 201 -1170 240 105 193 0 chr18 15234481 15234538 -70754396 + MLT1F-int LTR MaLR 827 894 -477 683 260 92 74 chr18 15234715 15235053 -70753881 + MLT1F-int LTR MaLR 1028 1371 0 1387 234 18 24 chr18 15235053 15235386 -70753548 + MLT1F LTR MaLR 1 331 -211 258 229 0 16 chr18 15235386 15235447 -70753487 + MLT1F LTR MaLR 481 540 -2 446 234 117 22 chr18 15235583 15235720 -70753214 + MLT1F LTR MaLR 385 534 -8 1791 119 0 25 chr18 15235974 15236260 -70752674 - AluSx SINE Alu 0 312 34 617 320 43 23 chr18 15237691 15237994 -70750940 - L2 LINE L2 -1384 1930 1622 261 180 98 0 chr18 15238407 15238468 -70750466 - MIR3 SINE MIR -18 190 124 840 172 7 20 chr18 15240063 15240214 -70748720 + FRAM SINE Alu 5 153 -13 637 330 118 44 chr18 15240644 15241900 -70747034 + L2 LINE L2 1311 2659 -655 188 257 33 124 chr18 15242288 15242498 -70746436 + L2 LINE L2 3123 3313 0 376 237 22 74 chr18 15242611 15242746 -70746188 - MER94 DNA DNA -1 133 6 389 342 81 47 chr18 15243094 15243328 -70745606 + L3 LINE CR1 1290 1531 -46 24 32 0 0 chr18 15243703 15243734 -70745200 + AT_rich Low_complexity Low_complexity 1 31 0 3771 152 17 2 chr18 15244706 15245300 -70743634 + LTR26 LTR ERV1 1 603 0 330 281 18 132 chr18 15245744 15245911 -70743023 - MIR3 SINE MIR -14 194 47 321 293 93 38 chr18 15246339 15246665 -70742269 - L2 LINE L2 -217 3096 2711 582 241 109 68 chr18 15250059 15250370 -70738564 - MER102a DNA MER1_type 0 330 7 225 0 0 0 chr18 15251995 15252020 -70736914 + (GA)n Simple_repeat Simple_repeat 1 25 0 506 222 76 67 chr18 15252141 15252366 -70736568 - LTR34 LTR ERV1 0 699 473 480 177 44 26 chr18 15252433 15252546 -70736388 - MER4C LTR ERV1 -346 119 5 180 290 177 24 chr18 15252918 15253042 -70735892 - L2 LINE L2 -622 2692 2550 2304 160 133 22 chr18 15255037 15255573 -70733361 - LTR49 LTR ERV1 0 595 1 383 273 135 59 chr18 15256349 15256638 -70732296 + LTR16A1 LTR ERVL 146 456 -1 571 249 17 62 chr18 15256834 15257011 -70731923 + MER63A DNA MER1_type 40 208 -2 1027 319 99 25 chr18 15257574 15258280 -70730654 - L2 LINE L2 -340 2974 2217 3859 152 29 37 chr18 15258373 15258852 -70730082 + L1MC1 LINE L1 5613 6085 -248 2022 109 3 0 chr18 15258852 15259135 -70729799 + AluSx SINE Alu 12 295 -17 3859 152 29 37 chr18 15259135 15259377 -70729557 + L1MC1 LINE L1 6085 6328 -5 781 255 81 91 chr18 15259578 15260281 -70728653 + HAL1 LINE L1 1812 2507 0 330 246 0 0 chr18 15260368 15260429 -70728505 - L2 LINE L2 -18 3295 3235 812 132 31 19 chr18 15261133 15261292 -70727642 - L1MA7 LINE L1 -4 6287 6127 928 281 73 35 chr18 15261294 15261693 -70727241 + REP3 LTR ERV 56 469 -93 1511 133 21 0 chr18 15261726 15261960 -70726974 + L1M2 LINE L1 5567 5805 -486 848 211 0 0 chr18 15262805 15262971 -70725963 + FRAM SINE Alu 1 165 -11 2081 93 3 10 chr18 15262972 15263261 -70725673 + AluSp SINE Alu 1 287 -26 22 0 0 0 chr18 15263261 15263283 -70725651 + AT_rich Low_complexity Low_complexity 1 22 0 235 235 69 20 chr18 15263412 15263514 -70725420 - L1MC5 LINE L1 -65 7896 7790 832 210 89 71 chr18 15263538 15263876 -70725058 - L1ME2 LINE L1 -10 6088 5745 * 7809 255 90 16 chr18 15263874 15265117 -70723817 - L1ME2 LINE L1 -733 5363 4213 1618 154 6 55 chr18 15265117 15265428 -70723506 + AluJo SINE Alu 1 296 -16 7809 255 90 16 chr18 15265428 15267101 -70721833 - L1ME2 LINE L1 -1883 4213 2231 1252 232 119 26 chr18 15267101 15267528 -70721406 + MLT1C LTR MaLR 1 467 0 1489 203 62 17 chr18 15267536 15267891 -70721043 - MLT1A2 LTR MaLR -3 371 1 775 245 67 32 chr18 15267892 15268235 -70720699 - L1ME2 LINE L1 -3985 2276 1922 779 197 14 53 chr18 15268235 15268443 -70720491 - MER3 DNA MER1_type 0 209 10 1564 280 68 42 chr18 15268443 15268648 -70720286 - L1ME2 LINE L1 -4357 1904 1706 2436 58 3 3 chr18 15268648 15268958 -70719976 + AluY SINE Alu 1 310 -1 1564 280 68 42 chr18 15268958 15270291 -70718643 - L1ME2 LINE L1 -4555 1706 271 448 202 229 0 chr18 15270295 15270404 -70718530 + MER45A DNA AcHobo 5 138 -40 1800 157 0 23 chr18 15270437 15270737 -70718197 + AluJo SINE Alu 1 293 -19 328 251 147 58 chr18 15270949 15271140 -70717794 + L2 LINE L2 3106 3313 0 1751 93 16 74 chr18 15271394 15271706 -70717228 + AluSx SINE Alu 1 294 -18 21 71 0 0 chr18 15273045 15273087 -70715847 + GC_rich Low_complexity Low_complexity 1 42 0 32 75 0 0 chr18 15273369 15273436 -70715498 + GC_rich Low_complexity Low_complexity 1 67 0 7893 17 0 0 chr18 15273852 15275147 -70713787 - L1PA3 LINE L1 0 6155 4857 337 311 47 17 chr18 15275816 15276023 -70712911 + HAL1b LINE L1 416 1693 -722 933 114 14 7 chr18 15276032 15276172 -70712762 + AluJb SINE Alu 9 149 -163 657 200 9 0 chr18 15276217 15276332 -70712602 - AluSq/x SINE Alu -192 120 5 512 194 0 11 chr18 15277150 15277243 -70711691 + AluJo/FLAM SINE Alu 27 118 -194 1765 172 10 0 chr18 15277243 15277540 -70711394 - AluJb SINE Alu -12 300 1 1576 168 61 71 chr18 15278109 15278503 -70710431 - MLT1B LTR MaLR 0 390 1 502 245 0 0 chr18 15278514 15278616 -70710318 - Charlie8 DNA MER1_type -2161 256 155 285 183 0 0 chr18 15279283 15279343 -70709591 + (CA)n Simple_repeat Simple_repeat 1 60 0 2315 67 0 10 chr18 15279611 15279909 -70709025 + AluY SINE Alu 1 295 -16 322 267 174 19 chr18 15280295 15280456 -70708478 + MIR SINE MIR 12 197 -65 188 213 33 16 chr18 15280514 15280575 -70708359 - MIR SINE MIR -166 96 35 1865 108 3 67 chr18 15280646 15280960 -70707974 + AluSx SINE Alu 1 294 -18 2232 103 0 3 chr18 15281601 15281903 -70707031 + AluSc SINE Alu 1 301 -8 1737 123 7 67 chr18 15282560 15282905 -70706029 - AluSx SINE Alu 0 327 1 1444 172 47 41 chr18 15283090 15283409 -70705525 + L1MC1 LINE L1 5998 6318 -15 255 296 40 72 chr18 15284354 15284479 -70704455 - L2 LINE L2 -14 3258 3138 1786 110 107 0 chr18 15284699 15284971 -70703963 + AluSx SINE Alu 1 301 -11 183 320 84 112 chr18 15285928 15286178 -70702756 - L2 LINE L2 0 3272 3030 2069 120 0 0 chr18 15286225 15286533 -70702401 + AluSx SINE Alu 1 308 -4 360 0 0 0 chr18 15287185 15287225 -70701709 + (CA)n Simple_repeat Simple_repeat 1 40 0 5070 156 46 57 chr18 15288173 15289140 -70699794 - L1MA10 LINE L1 0 6334 5379 1913 124 3 0 chr18 15289140 15289422 -70699512 - AluSx SINE Alu -7 305 23 5070 156 46 57 chr18 15289422 15289547 -70699387 - L1MA10 LINE L1 -955 5379 5254 5185 136 48 0 chr18 15289562 15290394 -70698540 - Tigger1 DNA MER2_type -1 2417 1546 1084 150 0 0 chr18 15290405 15290565 -70698369 - AluJb SINE Alu -20 292 133 10021 129 21 13 chr18 15290565 15292101 -70696833 - Tigger1 DNA MER2_type -869 1549 2 8011 187 24 11 chr18 15292102 15293710 -70695224 - L1MA10 LINE L1 -905 5241 3614 2791 233 30 28 chr18 15293825 15294258 -70694676 - L1M4c LINE L1 -4516 1625 1194 226 0 0 0 chr18 15294258 15294283 -70694651 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 2230 75 0 0 chr18 15294283 15294564 -70694370 - AluY SINE Alu -1 305 1 2791 233 30 28 chr18 15294564 15295321 -70693613 - L1M4c LINE L1 -4946 1195 605 810 344 55 34 chr18 15295525 15295941 -70692993 - L1M4c LINE L1 -5716 425 1 2288 166 26 19 chr18 15296539 15297037 -70691897 - MER89 LTR ERV1 -3 556 1 202 364 171 0 chr18 15297098 15297238 -70691696 + MIR SINE MIR 21 184 -78 1287 161 62 127 chr18 15297580 15298244 -70690690 - MER4A LTR ERV1 -2 463 1 1780 143 33 13 chr18 15298259 15298559 -70690375 + AluJb SINE Alu 2 307 -5 2587 42 0 6 chr18 15298567 15298879 -70690055 + AluY SINE Alu 1 310 -1 466 307 38 33 chr18 15298879 15299082 -70689852 - L2 LINE L2 -211 3102 2896 204 271 51 17 chr18 15299149 15299208 -70689726 - L2 LINE L2 -689 2625 2565 2139 102 6 28 chr18 15299212 15299575 -70689359 + L1PA13 LINE L1 5316 5676 -487 4021 103 220 137 chr18 15299575 15300859 -70688075 - pTR5 LTR ERV1 0 2438 743 3386 99 23 4 chr18 15300859 15301344 -70687590 + L1PA13 LINE L1 5670 6163 0 233 210 37 12 chr18 15301526 15301607 -70687327 - L1ME4a LINE L1 0 6121 6039 263 207 17 0 chr18 15302400 15302458 -70686476 - L2 LINE L2 -800 2514 2456 425 310 161 0 chr18 15303373 15303528 -70685406 - MER5A DNA MER1_type 0 189 10 6723 186 31 6 chr18 15303548 15304862 -70684072 - Cheshire DNA MER1_type 0 2420 1074 1396 111 0 10 chr18 15304862 15305061 -70683873 + AluSq SINE Alu 1 197 -116 534 164 0 82 chr18 15305072 15305194 -70683740 - AluSq SINE Alu -158 155 44 * 617 136 0 0 chr18 15305192 15305326 -70683608 + AluSq SINE Alu 199 332 0 2845 203 94 14 chr18 15305327 15305979 -70682955 - Cheshire DNA MER1_type -1333 1087 384 2012 109 0 32 chr18 15305979 15306120 -70682814 + AluSx SINE Alu 1 145 -167 2422 72 3 0 chr18 15306120 15306425 -70682509 + AluSp SINE Alu 1 306 -7 2012 109 0 32 chr18 15306425 15306596 -70682338 + AluSx SINE Alu 145 303 -9 1079 177 84 18 chr18 15306611 15306837 -70682097 - Cheshire DNA MER1_type -2179 241 1 454 160 11 32 chr18 15307406 15307498 -70681436 - MLT1D LTR MaLR -8 497 408 1141 110 0 7 chr18 15307498 15307653 -70681281 - MSTA LTR MaLR 0 428 275 252 163 0 0 chr18 15307657 15307700 -70681234 - L1ME4a LINE L1 -1882 5903 5861 474 232 0 0 chr18 15307709 15307804 -70681130 - MLT1B LTR MaLR 0 390 296 4060 177 40 1 chr18 15307804 15308521 -70680413 - ERVL LTR ERVL -1973 3791 3047 2396 135 34 3 chr18 15308521 15308899 -70680035 + MLT1B LTR MaLR 1 390 0 2967 124 66 0 chr18 15308905 15309358 -70679576 - L1MC2 LINE L1 -397 5947 5465 969 185 99 22 chr18 15309377 15309609 -70679325 - L1MC2 LINE L1 -1223 4923 4674 303 160 0 0 chr18 15309616 15309666 -70679268 + LTR67 LTR ERVL 479 528 -29 595 137 78 0 chr18 15310781 15310883 -70678051 + AluJo SINE Alu 66 175 -137 1247 121 29 0 chr18 15311131 15311337 -70677597 - LTR56 LTR ERV1 -121 324 113 1418 186 49 0 chr18 15311341 15311605 -70677329 + AluJo SINE Alu 6 282 -30 586 120 51 171 chr18 15311611 15311769 -70677165 - LTR56 LTR ERV1 -298 147 9 216 326 134 52 chr18 15312789 15313096 -70675838 + L2 LINE L2 2948 3279 -34 1264 214 10 53 chr18 15313108 15313412 -70675522 - MER4D LTR ERV1 -11 892 602 782 93 0 0 chr18 15313413 15313550 -70675384 - AluY SINE Alu 0 311 175 2087 110 3 3 chr18 15313552 15313851 -70675083 - AluSx SINE Alu -13 299 1 2153 123 0 0 chr18 15313874 15314184 -70674750 + AluSx SINE Alu 2 311 -1 355 152 0 0 chr18 15314220 15314297 -70674637 - MER4D LTR ERV1 -588 284 100 1450 164 28 45 chr18 15314342 15314534 -70674400 - MER49 LTR ERV1 -640 283 96 2172 95 0 3 chr18 15314534 15314839 -70674095 - AluSx SINE Alu -8 304 1 1450 164 28 45 chr18 15314839 15314933 -70674001 - MER49 LTR ERV1 -827 96 2 4118 164 34 44 chr18 15315046 15315927 -70673007 - L1MB7 LINE L1 -23 6161 5290 1586 155 177 14 chr18 15316914 15317276 -70671658 + L1PB4 LINE L1 5734 6156 0 2289 76 10 0 chr18 15317527 15317829 -70671105 - AluSc SINE Alu -2 307 3 2034 130 0 16 chr18 15318426 15318741 -70670193 - AluSq SINE Alu -3 310 1 1780 156 0 13 chr18 15318873 15319174 -70669760 + AluJb SINE Alu 15 311 -1 323 94 0 19 chr18 15319174 15319227 -70669707 + (GGAA)n Simple_repeat Simple_repeat 1 52 0 1717 171 7 0 chr18 15319505 15319785 -70669149 + AluJo SINE Alu 1 282 -30 246 221 138 69 chr18 15320093 15320478 -70668456 + L1MC5 LINE L1 7623 7998 -43 649 139 0 0 chr18 15320478 15320586 -70668348 - L1MA3 LINE L1 0 6305 6198 246 221 138 69 chr18 15320586 15320626 -70668308 + L1MC5 LINE L1 7998 8034 -7 409 286 43 14 chr18 15321025 15321165 -70667769 + MER91A DNA MER1_type 1 144 -52 1693 110 0 4 chr18 15321902 15322139 -70666795 - AluSq SINE Alu -77 236 1 641 262 13 86 chr18 15322565 15322878 -70666056 - L1MC4 LINE L1 0 8042 7753 1798 313 68 28 chr18 15322987 15323459 -70665475 - L1MC4 LINE L1 -460 7582 7130 282 29 0 0 chr18 15323459 15323494 -70665440 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 1798 313 68 28 chr18 15323494 15324112 -70664822 - L1MC4 LINE L1 -912 7130 6449 279 398 32 8 chr18 15324905 15325028 -70663906 + L2 LINE L2 3132 3257 -15 189 0 0 0 chr18 15325032 15325053 -70663881 + (TGAA)n Simple_repeat Simple_repeat 4 24 0 1431 133 0 4 chr18 15325238 15325471 -70663463 - L1MB3 LINE L1 0 6183 5952 185 244 23 93 chr18 15325525 15325611 -70663323 + L2 LINE L2 3183 3262 -10 275 281 18 35 chr18 15325759 15325873 -70663061 - MIR SINE MIR -41 221 110 1713 156 0 4 chr18 15328120 15328396 -70660538 - AluJb SINE Alu -30 282 8 25 83 0 0 chr18 15328813 15328873 -70660061 + AT_rich Low_complexity Low_complexity 1 60 0 1857 159 3 0 chr18 15329720 15330022 -70658912 + AluJo SINE Alu 2 304 -8 289 282 128 26 chr18 15331726 15331843 -70657091 + MIR SINE MIR 119 247 -15 21 0 0 0 chr18 15331874 15331895 -70657039 + AT_rich Low_complexity Low_complexity 1 21 0 2183 107 0 3 chr18 15332234 15332543 -70656391 + AluSx SINE Alu 1 308 -4 427 323 72 66 chr18 15332896 15333230 -70655704 - L2 LINE L2 0 3272 2937 218 364 68 21 chr18 15333982 15334320 -70654614 - L2 LINE L2 -1362 1952 1599 21 36 0 0 chr18 15336604 15336632 -70652302 + AT_rich Low_complexity Low_complexity 1 28 0 2128 97 0 10 chr18 15337524 15337824 -70651110 + AluSx SINE Alu 1 297 -15 357 62 0 0 chr18 15338379 15338427 -70650507 + (TG)n Simple_repeat Simple_repeat 2 49 0 2186 47 22 7 chr18 15338657 15338966 -70649968 - AluY SINE Alu 0 313 1 35 24 0 0 chr18 15339901 15339943 -70648991 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr18 15340390 15340418 -70648516 + AT_rich Low_complexity Low_complexity 1 28 0 1079 295 125 16 chr18 15340599 15341161 -70647773 - L2 LINE L2 -414 2900 2278 357 319 217 15 chr18 15341181 15341652 -70647282 - L2 LINE L2 -1318 1996 1431 2266 99 0 0 chr18 15342282 15342594 -70646340 + AluSx SINE Alu 1 312 0 539 317 81 5 chr18 15344194 15344380 -70644554 + MIR SINE MIR 34 233 -29 1533 231 141 70 chr18 15346509 15346802 -70642132 - L1MC4 LINE L1 0 8042 7771 1595 108 173 11 chr18 15346802 15347062 -70641872 - AluSx SINE Alu 0 302 1 1533 231 141 70 chr18 15347062 15347491 -70641443 - L1MC4 LINE L1 -271 7771 7261 2099 127 0 7 chr18 15347491 15347798 -70641136 - AluSx SINE Alu -7 305 1 1533 231 141 70 chr18 15347798 15347841 -70641093 - L1MC4 LINE L1 -781 7261 7222 1154 149 127 19 chr18 15347926 15348194 -70640740 + AluSg1 SINE Alu 11 307 -2 2736 160 31 8 chr18 15348671 15349189 -70639745 - L1MA4 LINE L1 -4 6296 5767 2209 82 3 3 chr18 15351710 15352004 -70636930 + AluSp SINE Alu 1 294 -19 2277 53 0 4 chr18 15352004 15352311 -70636623 + AluY SINE Alu 1 306 0 279 145 43 0 chr18 15352599 15352668 -70636266 + C-rich Low_complexity Low_complexity 3 74 0 1288 170 0 17 chr18 15352917 15353158 -70635776 + AluJb SINE Alu 15 251 -61 1769 106 6 81 chr18 15353230 15353552 -70635382 - AluSc SINE Alu -11 298 1 454 222 138 83 chr18 15353553 15353638 -70635296 - L1ME2 LINE L1 -34 6130 6051 2074 108 10 3 chr18 15353638 15353943 -70634991 - AluSp SINE Alu -6 307 1 454 222 138 83 chr18 15353943 15354160 -70634774 - L1ME2 LINE L1 -113 6051 5811 2193 95 3 0 chr18 15354429 15354725 -70634209 - AluY SINE Alu -14 297 1 2122 110 3 0 chr18 15354959 15355258 -70633676 + AluSg SINE Alu 1 300 -10 1118 164 49 36 chr18 15355281 15355381 -70633553 - MER30 DNA MER1_type -2 228 131 1950 145 3 0 chr18 15355381 15355692 -70633242 + AluSx SINE Alu 1 312 0 2025 108 10 14 chr18 15355701 15355997 -70632937 + AluSq SINE Alu 1 295 -18 1118 164 49 36 chr18 15355997 15356111 -70632823 - MER30 DNA MER1_type -106 124 1 1740 171 97 28 chr18 15356809 15357241 -70631693 - LTR48 LTR ERV1 -1 786 325 1901 122 10 23 chr18 15357686 15357990 -70630944 - AluSx SINE Alu -5 307 8 1917 135 10 0 chr18 15358409 15358698 -70630236 + AluSq SINE Alu 1 292 -21 353 177 13 0 chr18 15359064 15359143 -70629791 - L1MB2 LINE L1 -10 6161 6082 1813 98 3 110 chr18 15359148 15359474 -70629460 - AluSg1 SINE Alu -18 291 1 2134 105 3 0 chr18 15359476 15359772 -70629162 - AluSp SINE Alu -11 302 6 450 0 0 0 chr18 15359788 15359838 -70629096 + (TG)n Simple_repeat Simple_repeat 1 50 0 1939 123 0 0 chr18 15359838 15360114 -70628820 - AluSg1 SINE Alu -33 276 1 2015 117 31 0 chr18 15360801 15361092 -70627842 - AluSq SINE Alu -13 300 1 1800 125 68 14 chr18 15361092 15361267 -70627667 - AluSx SINE Alu -1 311 112 2142 112 0 3 chr18 15361267 15361571 -70627363 - AluSg SINE Alu -7 303 1 1800 125 68 14 chr18 15361571 15361690 -70627244 - AluSx SINE Alu -200 112 1 194 282 70 14 chr18 15362453 15362524 -70626410 + L2 LINE L2 3148 3222 -50 2097 119 0 0 chr18 15364183 15364494 -70624440 - AluY SINE Alu 0 311 1 310 297 109 29 chr18 15365568 15365743 -70623191 + MIR SINE MIR 28 216 -46 272 179 30 45 chr18 15366542 15366609 -70622325 + AluSp/q SINE Alu 164 229 -74 560 199 22 15 chr18 15366640 15366776 -70622158 + AluSp/q SINE Alu 176 312 -1 32 0 0 0 chr18 15366809 15366841 -70622093 + AT_rich Low_complexity Low_complexity 1 32 0 1068 104 146 57 chr18 15366955 15367201 -70621733 - AluJo SINE Alu 0 319 55 1858 155 0 10 chr18 15367359 15367663 -70621271 + AluSx SINE Alu 1 301 -11 1157 128 0 0 chr18 15368036 15368208 -70620726 - AluJo/FRAM SINE Alu -5 307 136 1308 185 51 10 chr18 15368210 15368502 -70620432 - AluJo SINE Alu -8 304 1 1331 153 7 90 chr18 15368877 15369032 -70619902 + AluJo SINE Alu 1 121 -191 1999 135 3 0 chr18 15369032 15369335 -70619599 + AluSg SINE Alu 1 304 -6 1331 153 7 90 chr18 15369335 15369480 -70619454 + AluJo SINE Alu 121 276 -36 1015 121 40 0 chr18 15369479 15369628 -70619306 - AluSc SINE Alu -52 257 103 * 1141 144 0 92 chr18 15369637 15369866 -70619068 + AluSg/x SINE Alu 98 305 -7 284 296 48 58 chr18 15369929 15370118 -70618816 + MIR SINE MIR 55 241 -21 497 205 33 126 chr18 15370139 15370239 -70618695 + MIR SINE MIR 8 91 -171 2324 95 0 0 chr18 15370239 15370544 -70618390 - AluSg SINE Alu -3 307 3 497 205 33 126 chr18 15370544 15370594 -70618340 + MIR SINE MIR 91 144 -118 309 51 0 0 chr18 15370655 15370694 -70618240 + (TG)n Simple_repeat Simple_repeat 2 40 0 709 174 26 0 chr18 15370698 15370813 -70618121 - FLAM_C SINE Alu -23 120 3 1166 153 0 0 chr18 15370826 15371016 -70617918 - AluSg/x SINE Alu -18 292 103 408 176 0 88 chr18 15371016 15371118 -70617816 - AluSq SINE Alu -113 200 108 1263 82 11 11 chr18 15371118 15371302 -70617632 - AluSp SINE Alu -14 299 116 4248 126 46 22 chr18 15371329 15372994 -70615940 - SVA Other Other -518 1170 432 1959 164 18 0 chr18 15373134 15373476 -70615458 + L1MB7 LINE L1 5621 5968 -216 718 261 133 41 chr18 15373476 15373866 -70615068 - L1M4 LINE L1 -959 5187 4762 312 278 17 15 chr18 15373888 15374066 -70614868 - L1MEc LINE L1 -4887 1366 1135 2329 78 0 10 chr18 15374070 15374379 -70614555 - AluY SINE Alu -5 306 1 366 237 43 0 chr18 15374380 15374473 -70614461 - L1MD1 LINE L1 -34 6208 6112 1407 173 4 5 chr18 15374477 15374784 -70614150 + MER2 DNA MER2_type 5 345 0 1591 216 17 47 chr18 15374785 15375193 -70613741 - L1MD2 LINE L1 -132 6227 5832 556 237 75 26 chr18 15375177 15375443 -70613491 - L1MEc LINE L1 -5308 1088 810 * 5541 59 14 7 chr18 15376701 15377426 -70611508 - SVA Other Other -1 1385 656 385 248 0 34 chr18 15377426 15377543 -70611391 - L1MEc LINE L1 -5581 815 703 2106 100 7 10 chr18 15377543 15377852 -70611082 + L1PB1 LINE L1 5844 6151 0 628 230 13 20 chr18 15378224 15378376 -70610558 + MIR SINE MIR 58 208 -54 228 259 241 18 chr18 15378463 15378575 -70610359 - L1MEc LINE L1 -5754 642 506 279 327 60 7 chr18 15378766 15378916 -70610018 - L1MCa LINE L1 -1533 5031 4874 802 288 71 9 chr18 15378969 15379292 -70609642 - HAL1 LINE L1 -690 1817 1475 3946 239 32 53 chr18 15379910 15380438 -70608496 - L1MCa LINE L1 -2393 4171 3634 1678 175 0 26 chr18 15380438 15380741 -70608193 - AluJo SINE Alu -11 301 7 3946 239 32 53 chr18 15380741 15381615 -70607319 - L1MCa LINE L1 -2930 3634 2798 2194 145 94 8 chr18 15381615 15382009 -70606925 - MSTA LTR MaLR 0 428 1 400 119 0 0 chr18 15382033 15382092 -70606842 - Tigger4(Zombi) DNA MER2_type -2671 60 2 399 197 16 57 chr18 15382094 15382216 -70606718 + ERVL LTR ERVL 5348 5464 -300 360 236 104 9 chr18 15382237 15382343 -70606591 - L1MCa LINE L1 -3938 2807 2692 1773 176 181 19 chr18 15382452 15382976 -70605958 - L1MCa LINE L1 -3947 2617 2058 5968 122 11 30 chr18 15383098 15384850 -70604084 - L1PA14 LINE L1 -12 6149 4417 2328 78 0 7 chr18 15384850 15385158 -70603776 - AluY SINE Alu -4 307 2 5968 122 11 30 chr18 15385158 15385301 -70603633 - L1PA14 LINE L1 -1744 4417 4273 1842 176 177 8 chr18 15386148 15386910 -70602024 - L1MCa LINE L1 -4460 2104 1115 3481 128 21 26 chr18 15386943 15387520 -70601414 - MER4B LTR ERV1 -36 574 1 1379 201 39 15 chr18 15387520 15387853 -70601081 - L1MCa LINE L1 -4928 1117 777 1315 263 38 23 chr18 15387850 15388242 -70600692 - L1MCa LINE L1 -6028 536 139 * 574 289 142 42 chr18 15388317 15388937 -70599997 - HAL1 LINE L1 -1663 844 163 2278 67 0 26 chr18 15388949 15389262 -70599672 - AluY SINE Alu -6 305 1 728 87 0 0 chr18 15389262 15389354 -70599580 - AluSg SINE Alu -217 93 2 1937 57 0 8 chr18 15389361 15389659 -70599275 - AluY SINE Alu 0 336 41 674 296 117 0 chr18 15389938 15390144 -70598790 - MIR SINE MIR -5 257 28 1674 162 7 3 chr18 15391838 15392128 -70596806 + AluJb SINE Alu 1 291 -21 1900 126 0 30 chr18 15392475 15392776 -70596158 - AluSg1 SINE Alu -17 292 1 1992 126 13 7 chr18 15393447 15393757 -70595177 - AluSx SINE Alu 0 312 1 2157 110 3 0 chr18 15394135 15394443 -70594491 + AluSc SINE Alu 1 309 0 497 215 89 15 chr18 15394790 15394925 -70594009 - MER110-int LTR ERV1 -52 4595 4451 3583 147 22 7 chr18 15394925 15395510 -70593424 + MER4D LTR ERV1 1 594 -309 2190 80 0 17 chr18 15395520 15395807 -70593127 - AluY SINE Alu -29 282 1 5478 114 16 37 chr18 15395862 15396696 -70592238 + MER50-int LTR ERV1 6382 7197 -8 3936 138 60 26 chr18 15396696 15397150 -70591784 + MER50 LTR ERV1 1 488 -246 1969 96 20 55 chr18 15397150 15397465 -70591469 + AluSx SINE Alu 1 305 0 3936 138 60 26 chr18 15397465 15397692 -70591242 + MER50 LTR ERV1 488 706 -28 2361 96 77 8 chr18 15397810 15398163 -70590771 + MER51B LTR ERV1 1 377 0 2567 166 68 40 chr18 15398519 15399091 -70589843 - LTR49 LTR ERV1 -7 588 1 3313 117 34 2 chr18 15399175 15399673 -70589261 + MER75 DNA T2_type 1 514 0 1116 277 64 84 chr18 15399762 15400051 -70588883 + MER110-int LTR ERV1 3761 4054 -593 2445 81 3 0 chr18 15400051 15400359 -70588575 + AluY SINE Alu 1 309 -2 1116 277 64 84 chr18 15400359 15400774 -70588160 + MER110-int LTR ERV1 4054 4451 -196 1140 158 8 142 chr18 15400778 15400814 -70588120 - MER4D LTR ERV1 0 886 847 2398 67 0 14 chr18 15400814 15401111 -70587823 - AluY SINE Alu -18 293 1 1140 158 8 142 chr18 15401111 15401435 -70587499 - MER4D LTR ERV1 -39 847 548 1070 114 0 78 chr18 15401435 15401602 -70587332 + AluSq SINE Alu 1 154 -159 321 57 133 0 chr18 15401722 15401880 -70587054 + (TA)n Simple_repeat Simple_repeat 1 179 0 36 53 0 0 chr18 15401881 15401938 -70586996 + AT_rich Low_complexity Low_complexity 1 57 0 26 30 0 0 chr18 15402792 15402825 -70586109 + AT_rich Low_complexity Low_complexity 1 33 0 33 25 0 0 chr18 15402954 15402994 -70585940 + AT_rich Low_complexity Low_complexity 1 40 0 2291 94 10 10 chr18 15403630 15403937 -70584997 + AluSq SINE Alu 1 307 -6 191 275 0 0 chr18 15404135 15404175 -70584759 - L2 LINE L2 -31 3241 3202 1950 127 0 20 chr18 15404407 15404699 -70584235 - AluSx SINE Alu -7 305 20 287 253 79 73 chr18 15405244 15405422 -70583512 - MIR3 SINE MIR -9 199 21 350 197 13 0 chr18 15405485 15405561 -70583373 + MER116 DNA Mariner 1 77 -3 1548 175 3 58 chr18 15406179 15406488 -70582446 + AluJo SINE Alu 1 292 -20 802 241 73 17 chr18 15406567 15406799 -70582135 + MIR SINE MIR 7 251 -11 397 318 138 0 chr18 15407226 15407415 -70581519 - MIR SINE MIR -28 234 20 1994 163 0 3 chr18 15409121 15409428 -70579506 + AluJo SINE Alu 2 307 -5 421 287 101 16 chr18 15410483 15410671 -70578263 - MIR SINE MIR -46 216 13 219 210 40 50 chr18 15411238 15411338 -70577596 + MIR3 SINE MIR 89 187 -21 204 292 97 18 chr18 15412367 15412480 -70576454 - L2 LINE L2 0 3272 3151 23 33 0 0 chr18 15413064 15413094 -70575840 + AT_rich Low_complexity Low_complexity 1 30 0 249 269 124 21 chr18 15413344 15413489 -70575445 + MIR SINE MIR 103 262 0 914 241 49 40 chr18 15414582 15414730 -70574204 + L1ME3A LINE L1 5667 5812 -358 2254 123 0 0 chr18 15414730 15415039 -70573895 + AluSx SINE Alu 1 309 -3 914 241 49 40 chr18 15415039 15415292 -70573642 + L1ME3A LINE L1 5812 5962 -208 449 255 144 0 chr18 15415918 15416071 -70572863 + MIR SINE MIR 31 205 -57 985 196 84 33 chr18 15416304 15416579 -70572355 - MER33 DNA MER1_type -22 302 14 2398 87 0 10 chr18 15419133 15419445 -70569489 - AluY SINE Alu -1 310 2 712 106 0 29 chr18 15419673 15419777 -70569157 + FLAM_C SINE Alu 21 121 -22 2478 70 0 7 chr18 15420286 15420588 -70568346 + AluY SINE Alu 1 300 -11 409 269 62 28 chr18 15420839 15420984 -70567950 - MER5B DNA MER1_type -2 176 27 2199 77 3 80 chr18 15421285 15421610 -70567324 + AluSx SINE Alu 1 300 -12 264 59 0 0 chr18 15421610 15421644 -70567290 + (TA)n Simple_repeat Simple_repeat 2 35 0 2478 74 7 3 chr18 15423342 15423652 -70565282 - AluY SINE Alu 0 311 1 252 143 0 0 chr18 15424863 15424905 -70564029 + (TCCC)n Simple_repeat Simple_repeat 1 42 0 2076 116 0 7 chr18 15424905 15425181 -70563753 - AluSx SINE Alu -38 274 1 471 268 16 0 chr18 15425295 15425418 -70563516 + L2 LINE L2 3187 3311 -2 1739 150 47 61 chr18 15425692 15425993 -70562941 + L1M3 LINE L1 4964 5268 -912 1723 164 3 24 chr18 15425993 15426291 -70562643 + AluJo SINE Alu 5 296 -16 1739 150 47 61 chr18 15426291 15426339 -70562595 + L1M3 LINE L1 5268 5315 -865 2005 101 56 7 chr18 15426339 15426625 -70562309 + AluSc SINE Alu 1 300 -9 1739 150 47 61 chr18 15426625 15426823 -70562111 + L1M3 LINE L1 5315 5520 -660 198 103 0 0 chr18 15427245 15427274 -70561660 + (A)n Simple_repeat Simple_repeat 1 29 0 180 231 0 0 chr18 15427659 15427711 -70561223 + CT-rich Low_complexity Low_complexity 4 55 0 451 222 36 11 chr18 15428580 15428737 -70560197 - MLT1J2 LTR MaLR -189 220 48 227 235 0 0 chr18 15431105 15431156 -70557778 - Tigger4(Zombi) DNA MER2_type -2680 51 1 2113 99 27 17 chr18 15431558 15431850 -70557084 - AluSg SINE Alu -15 295 1 2435 70 0 0 chr18 15433205 15433518 -70555416 - AluSq SINE Alu 0 313 1 1041 195 102 5 chr18 15434135 15434350 -70554584 + MER46A DNA MER2_type 1 236 0 271 204 34 23 chr18 15434494 15434582 -70554352 + CT-rich Low_complexity Low_complexity 6 94 0 196 214 41 10 chr18 15434775 15434873 -70554061 + (TAGA)n Simple_repeat Simple_repeat 3 103 0 413 280 13 13 chr18 15435712 15435862 -70553072 - L2 LINE L2 -6 3307 3158 1550 132 0 9 chr18 15435879 15436106 -70552828 + AluSx SINE Alu 1 225 -87 961 287 139 5 chr18 15436118 15436529 -70552405 - L2 LINE L2 -544 2770 2305 2345 157 45 0 chr18 15437670 15438097 -70550837 - L1MB3 LINE L1 -1 6182 5737 288 176 0 40 chr18 15438150 15438224 -70550710 - L1PB4 LINE L1 -2 6154 6084 225 143 0 61 chr18 15438319 15438368 -70550566 - L1PB4 LINE L1 -27 6129 6084 * 230 170 0 57 chr18 15438363 15438416 -70550518 - L1PB4 LINE L1 -23 6133 6084 230 170 0 57 chr18 15438411 15438464 -70550470 - L1PB4 LINE L1 -23 6133 6084 230 170 0 57 chr18 15438555 15438608 -70550326 - L1PB4 LINE L1 -23 6133 6084 230 170 0 57 chr18 15438743 15438796 -70550138 - L1PB4 LINE L1 -23 6133 6084 230 170 0 57 chr18 15439367 15439420 -70549514 - L1PB4 LINE L1 -23 6133 6084 230 170 0 57 chr18 15439415 15439468 -70549466 - L1PB4 LINE L1 -23 6133 6084 227 140 0 60 chr18 15439514 15439564 -70549370 - L1PB4 LINE L1 -26 6130 6084 * 240 151 0 57 chr18 15439559 15439612 -70549322 - L1PB4 LINE L1 -23 6133 6084 230 170 0 57 chr18 15439607 15439660 -70549274 - L1PB4 LINE L1 -23 6133 6084 * 238 151 0 57 chr18 15439700 15439753 -70549181 - L1PB4 LINE L1 -23 6133 6084 230 170 0 57 chr18 15439748 15439801 -70549133 - L1PB4 LINE L1 -23 6133 6084 * 248 132 0 57 chr18 15439844 15439897 -70549037 - L1PB4 LINE L1 -23 6133 6084 5120 153 21 5 chr18 15439991 15441146 -70547788 - L1PB4 LINE L1 -26 6130 4961 262 85 185 0 chr18 15441345 15441400 -70547534 - L1PA13 LINE L1 0 6163 6100 589 118 32 0 chr18 15441401 15441494 -70547440 - L1PA13 LINE L1 -211 5952 5857 547 93 0 0 chr18 15441494 15441569 -70547365 - AluS SINE Alu -229 83 9 1742 106 0 0 chr18 15441570 15441797 -70547137 + AluSg/x SINE Alu 82 308 -2 350 113 81 0 chr18 15441800 15441862 -70547072 - L1PA13 LINE L1 -300 5863 5797 1638 263 179 3 chr18 15441862 15442592 -70546342 - L2 LINE L2 -566 2748 1890 2702 182 22 23 chr18 15443241 15443585 -70545349 + L1MB8 LINE L1 5625 5969 -209 2098 133 3 7 chr18 15443585 15443887 -70545047 + AluSx SINE Alu 1 301 -11 2702 182 22 23 chr18 15443887 15444097 -70544837 + L1MB8 LINE L1 5969 6178 0 1596 186 0 0 chr18 15444103 15444372 -70544562 + AluSx SINE Alu 43 311 -1 1748 164 0 14 chr18 15444719 15445012 -70543922 + AluJo SINE Alu 1 289 -23 204 244 0 0 chr18 15446141 15446186 -70542748 - MIR SINE MIR -196 66 22 1148 224 5 89 chr18 15447036 15447172 -70541762 + L1M3 LINE L1 4266 4412 -1734 2468 72 3 0 chr18 15447172 15447464 -70541470 + AluSx SINE Alu 1 293 -19 1148 224 5 89 chr18 15447464 15447584 -70541350 + L1M3 LINE L1 4412 4541 -1605 2209 118 0 3 chr18 15447584 15447881 -70541053 + AluSg SINE Alu 1 296 -14 1148 224 5 89 chr18 15447881 15448070 -70540864 + L1M3 LINE L1 4541 4674 -1472 1693 176 18 146 chr18 15448148 15448342 -70540592 + L1M3 LINE L1 4672 4889 -1257 998 146 0 29 chr18 15448342 15448513 -70540421 + FRAM SINE Alu 1 166 0 1693 176 18 146 chr18 15448513 15448853 -70540081 + L1M3 LINE L1 4889 5271 -875 2186 129 0 10 chr18 15448853 15449164 -70539770 + AluSx SINE Alu 1 308 -4 2038 168 12 35 chr18 15449165 15449221 -70539713 + L1MA6 LINE L1 5895 5951 -349 2052 131 3 20 chr18 15449221 15449526 -70539408 + AluSq SINE Alu 1 300 -13 2038 168 12 35 chr18 15449526 15449875 -70539059 + L1MA6 LINE L1 5951 6291 -9 2131 106 126 50 chr18 15449875 15450273 -70538661 - MSTA LTR MaLR 0 428 1 1693 176 18 146 chr18 15450273 15450461 -70538473 + L1M3 LINE L1 5269 5305 -841 420 156 13 0 chr18 15450468 15450545 -70538389 + L1M3 LINE L1 5371 5448 -735 2677 220 59 22 chr18 15450753 15451166 -70537768 + L1ME1 LINE L1 5383 5779 -387 2199 107 10 10 chr18 15451166 15451476 -70537458 - AluY SINE Alu -1 310 1 2677 220 59 22 chr18 15451476 15451495 -70537439 + L1ME1 LINE L1 5779 5796 -370 1597 127 0 0 chr18 15451495 15451723 -70537211 + AluSg/x SINE Alu 80 307 -3 2677 220 59 22 chr18 15451723 15451972 -70536962 + L1ME1 LINE L1 5796 6090 -76 222 273 120 46 chr18 15452139 15452355 -70536579 + MIR SINE MIR 21 252 -10 1936 118 44 3 chr18 15452474 15452771 -70536163 - AluSx SINE Alu -3 309 1 1238 130 65 51 chr18 15452836 15453052 -70535882 + AluSx SINE Alu 1 219 -93 1109 245 96 43 chr18 15454732 15455201 -70533733 - MER34 LTR ERV1 -48 494 1 773 196 74 81 chr18 15455257 15455553 -70533381 + L1MC5 LINE L1 7622 7915 -46 284 302 265 0 chr18 15456207 15456396 -70532538 + MIR SINE MIR 3 241 -21 372 113 19 0 chr18 15457096 15457149 -70531785 + AluJb SINE Alu 58 111 -191 186 43 0 0 chr18 15457181 15457204 -70531730 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1660 136 3 35 chr18 15457217 15457503 -70531431 + AluJb SINE Alu 12 288 -24 291 54 0 0 chr18 15457691 15457728 -70531206 + (T)n Simple_repeat Simple_repeat 1 37 0 538 260 40 17 chr18 15458335 15458508 -70530426 + MER69A DNA AcHobo 1 177 0 2365 97 0 0 chr18 15459294 15459593 -70529341 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr18 15460245 15460266 -70528668 + AT_rich Low_complexity Low_complexity 1 21 0 2468 88 3 0 chr18 15460337 15460644 -70528290 + AluSx SINE Alu 1 308 -4 703 86 0 53 chr18 15461126 15461278 -70527656 + (GGA)n Simple_repeat Simple_repeat 2 145 0 326 317 91 0 chr18 15461592 15461835 -70527099 - L2 LINE L2 -896 2418 2154 2138 107 7 16 chr18 15462219 15462528 -70526406 + AluSx SINE Alu 1 306 -6 2660 46 0 0 chr18 15462578 15462881 -70526053 + AluY SINE Alu 1 303 -8 1133 115 6 0 chr18 15463145 15463302 -70525632 + FRAM SINE Alu 1 157 -19 422 243 237 17 chr18 15463669 15463846 -70525088 + MIR SINE MIR 37 252 -10 180 326 102 10 chr18 15464521 15464619 -70524315 + L2 LINE L2 3146 3252 -20 2178 102 18 0 chr18 15464619 15464903 -70524031 + AluSx SINE Alu 4 292 -20 1114 39 0 0 chr18 15465171 15465298 -70523636 - AluSp/q SINE Alu -9 304 178 3116 179 22 8 chr18 15465440 15466032 -70522902 + L1MB7 LINE L1 5559 6158 -26 2263 100 0 25 chr18 15467464 15467785 -70521149 + AluSq SINE Alu 1 313 0 1909 110 40 0 chr18 15467933 15468206 -70520728 - AluSx SINE Alu -17 295 12 360 153 17 0 chr18 15468308 15468367 -70520567 - AluJ/FLAM SINE Alu -242 60 1 22 0 0 0 chr18 15469109 15469131 -70519803 + AT_rich Low_complexity Low_complexity 1 22 0 1763 148 37 30 chr18 15469474 15469772 -70519162 + AluJo SINE Alu 1 300 -12 276 296 31 0 chr18 15470105 15470203 -70518731 + L1ME2 LINE L1 6049 6149 -15 813 197 0 0 chr18 15470382 15470514 -70518420 + FLAM_A SINE Alu 1 132 -1 26 64 0 0 chr18 15470578 15470625 -70518309 + AT_rich Low_complexity Low_complexity 1 47 0 1794 171 3 7 chr18 15470901 15471188 -70517746 + AluJo SINE Alu 3 288 -24 2164 104 3 10 chr18 15471199 15471515 -70517419 + AluSp SINE Alu 1 314 0 371 286 95 5 chr18 15471561 15471750 -70517184 - MIR SINE MIR -4 258 53 1770 93 38 118 chr18 15472000 15472313 -70516621 - AluSg SINE Alu -22 288 1 4450 175 25 17 chr18 15472352 15472895 -70516039 + L1MB8 LINE L1 5186 5738 -440 1859 139 39 4 chr18 15472895 15473175 -70515759 + AluJb SINE Alu 1 290 -22 4450 175 25 17 chr18 15473175 15473567 -70515367 + L1MB8 LINE L1 5738 6126 -52 248 159 0 0 chr18 15474028 15474072 -70514862 - L1M4 LINE L1 -330 5848 5805 313 250 26 13 chr18 15474143 15474219 -70514715 + L2 LINE L2 3237 3313 0 1838 153 3 32 chr18 15474298 15474606 -70514328 + AluJo SINE Alu 1 299 -13 877 159 7 8 chr18 15474630 15474799 -70514135 + L1MB7 LINE L1 5678 5847 -337 2053 146 7 3 chr18 15475901 15476210 -70512724 - AluJb SINE Alu -2 310 1 2042 107 24 24 chr18 15476406 15476704 -70512230 + AluSx SINE Alu 1 298 -14 234 164 246 0 chr18 15477266 15477327 -70511607 - L1MC1 LINE L1 -13 6320 6245 282 56 0 0 chr18 15477338 15477374 -70511560 + (T)n Simple_repeat Simple_repeat 1 36 0 2322 88 0 26 chr18 15477611 15477916 -70511018 - AluSp SINE Alu -16 297 1 3348 130 37 2 chr18 15477950 15478458 -70510476 - MER1A DNA MER1_type -1 526 1 840 232 6 0 chr18 15478686 15478850 -70510084 + FRAM SINE Alu 1 165 -1 2001 111 0 90 chr18 15478852 15479195 -70509739 + AluSx SINE Alu 1 312 0 2379 91 3 0 chr18 15479329 15479625 -70509309 + AluSp SINE Alu 3 299 -14 2431 87 0 0 chr18 15479787 15480086 -70508848 + AluSq SINE Alu 1 299 -14 2210 103 7 0 chr18 15480468 15480799 -70508135 - AluSq SINE Alu 0 333 1 448 158 21 0 chr18 15481368 15481463 -70507471 + GA-rich Low_complexity Low_complexity 2 98 0 188 200 22 22 chr18 15481688 15481733 -70507201 - MIR SINE MIR -110 152 108 321 117 0 0 chr18 15482040 15482100 -70506834 + (TA)n Simple_repeat Simple_repeat 1 60 0 261 0 0 0 chr18 15482099 15482128 -70506806 + (CA)n Simple_repeat Simple_repeat 2 30 0 * 1176 157 5 26 chr18 15482130 15482321 -70506613 - AluJo SINE Alu -40 272 86 715 211 90 0 chr18 15482354 15482510 -70506424 - FRAM SINE Alu -6 170 1 232 163 58 0 chr18 15482605 15482691 -70506243 + (TA)n Simple_repeat Simple_repeat 1 91 0 236 298 215 37 chr18 15483602 15483928 -70505006 - L2 LINE L2 -846 2468 2085 2172 136 0 0 chr18 15484084 15484394 -70504540 - AluSx SINE Alu -2 310 1 764 254 30 0 chr18 15484574 15484775 -70504159 + MIR SINE MIR 56 262 0 2157 139 0 0 chr18 15484857 15485167 -70503767 + AluSx SINE Alu 1 310 -2 2396 84 0 7 chr18 15489453 15489752 -70499182 - AluSx SINE Alu -15 297 1 2306 106 3 0 chr18 15490128 15490429 -70498505 + AluSp SINE Alu 2 303 -10 1867 120 38 3 chr18 15490551 15490718 -70498216 - AluSx SINE Alu -11 301 118 201 39 0 0 chr18 15490718 15490744 -70498190 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1867 120 38 3 chr18 15490744 15490867 -70498067 - AluSx SINE Alu -194 118 1 224 196 0 18 chr18 15491033 15491089 -70497845 + CT-rich Low_complexity Low_complexity 5 59 0 989 200 0 0 chr18 15491099 15491274 -70497660 - FAM SINE Alu 0 175 1 1167 109 19 0 chr18 15491867 15492023 -70496911 - AluSc SINE Alu -20 289 131 285 29 0 0 chr18 15492828 15492862 -70496072 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1626 176 11 0 chr18 15492864 15493142 -70495792 - AluJo SINE Alu -31 281 1 469 251 0 22 chr18 15493993 15494176 -70494758 + (TG)n Simple_repeat Simple_repeat 2 180 0 206 241 35 0 chr18 15494313 15494371 -70494563 - MER5A DNA MER1_type -95 94 35 192 366 38 0 chr18 15494595 15494726 -70494208 + L2 LINE L2 2645 2780 -534 211 328 57 8 chr18 15495009 15495131 -70493803 + L2 LINE L2 3161 3288 -25 401 271 138 34 chr18 15495510 15495885 -70493049 + MLT1J LTR MaLR 1 354 -92 1869 161 3 7 chr18 15496640 15496939 -70491995 - AluJb SINE Alu -14 298 1 265 270 101 0 chr18 15497826 15497915 -70491019 + MIR SINE MIR 117 214 -48 661 251 77 17 chr18 15498817 15498890 -70490044 + MLT2B2 LTR ERVL 1 68 -346 2209 112 7 0 chr18 15498890 15499185 -70489749 + AluSx SINE Alu 1 297 -15 661 251 77 17 chr18 15499185 15499459 -70489475 + MLT2B2 LTR ERVL 68 326 -88 575 253 84 25 chr18 15500036 15500238 -70488696 - MIR SINE MIR -15 247 34 239 262 20 74 chr18 15501749 15501898 -70487036 + HAL1 LINE L1 636 776 -1731 1137 149 50 30 chr18 15502000 15502201 -70486733 + AluJb SINE Alu 97 301 -11 1022 245 127 26 chr18 15502201 15502626 -70486308 + L2 LINE L2 2319 2786 -528 2589 77 0 0 chr18 15502726 15503036 -70485898 + AluSq SINE Alu 1 310 -3 2469 53 0 0 chr18 15504165 15504490 -70484444 - AluSg SINE Alu 0 325 1 1238 144 34 24 chr18 15504494 15504702 -70484232 - AluSc SINE Alu -16 293 84 744 211 90 0 chr18 15504735 15504891 -70484043 - FRAM SINE Alu -6 170 1 232 163 58 0 chr18 15504986 15505072 -70483862 + (TA)n Simple_repeat Simple_repeat 2 92 0 579 106 0 75 chr18 15505515 15505609 -70483325 - AluJ/FLAM SINE Alu -224 88 2 2514 62 7 13 chr18 15505625 15505932 -70483002 - AluSp SINE Alu -8 305 1 1991 122 14 7 chr18 15506155 15506483 -70482451 - AluJo SINE Alu 0 330 1 1855 122 33 63 chr18 15507007 15507174 -70481760 - AluSx SINE Alu -18 294 138 2307 100 0 3 chr18 15507174 15507475 -70481459 - AluSx SINE Alu -12 300 1 1855 122 33 63 chr18 15507475 15507610 -70481324 - AluSx SINE Alu -174 138 1 2161 118 3 34 chr18 15507618 15507940 -70480994 - AluSx SINE Alu 0 312 1 1450 156 80 0 chr18 15507941 15508179 -70480755 + AluJb SINE Alu 44 300 -12 212 140 0 40 chr18 15508190 15508240 -70480694 + (CAAAA)n Simple_repeat Simple_repeat 3 50 0 2192 119 3 3 chr18 15508503 15508806 -70480128 - AluSx SINE Alu -9 303 1 2155 139 0 3 chr18 15509388 15509697 -70479237 + AluSx SINE Alu 1 308 -4 2586 51 0 0 chr18 15509756 15510049 -70478885 + AluY SINE Alu 1 293 -18 2169 97 3 36 chr18 15510125 15510433 -70478501 + AluSc SINE Alu 1 298 -11 277 204 0 0 chr18 15510766 15510815 -70478119 + L2 LINE L2 3265 3313 0 602 266 97 52 chr18 15510907 15511155 -70477779 - MIR SINE MIR -2 260 2 380 247 73 33 chr18 15512524 15512674 -70476260 - MIR SINE MIR -1 261 106 228 172 75 0 chr18 15513852 15513945 -70474989 + (TA)n Simple_repeat Simple_repeat 1 100 0 2268 96 20 10 chr18 15516009 15516310 -70472624 + AluSx SINE Alu 1 304 -8 2469 88 0 0 chr18 15517438 15517746 -70471188 - AluSg1 SINE Alu -1 308 1 1318 181 113 4 chr18 15517751 15518017 -70470917 - AluJo SINE Alu -17 295 1 2112 123 0 49 chr18 15518088 15518396 -70470538 + AluSx SINE Alu 1 293 -19 21 57 0 19 chr18 15518434 15518472 -70470462 + AT_rich Low_complexity Low_complexity 1 39 -13 710 190 41 0 chr18 15518472 15518593 -70470341 + FLAM_C SINE Alu 1 126 -7 21 57 0 19 chr18 15518593 15518607 -70470327 + AT_rich Low_complexity Low_complexity 39 52 0 21 0 0 0 chr18 15518652 15518673 -70470261 + AT_rich Low_complexity Low_complexity 1 21 0 2309 106 0 0 chr18 15518751 15519052 -70469882 + AluSq SINE Alu 1 301 -12 2375 95 0 19 chr18 15519061 15519376 -70469558 + AluSq SINE Alu 1 309 -4 2518 71 0 0 chr18 15519385 15519696 -70469238 + AluY SINE Alu 1 311 0 326 283 75 0 chr18 15520111 15520217 -70468717 - L3b LINE CR1 -202 1381 1268 744 138 0 113 chr18 15520261 15520420 -70468514 - AluJb SINE Alu -170 142 2 2081 120 7 0 chr18 15520910 15521202 -70467732 + AluSg SINE Alu 1 294 -16 1435 131 39 192 chr18 15521341 15521641 -70467293 + MLT1B LTR MaLR 3 347 -43 2411 130 24 0 chr18 15521641 15522019 -70466915 - L1PA16 LINE L1 -4 6162 5776 1658 173 39 29 chr18 15522019 15522325 -70466609 - AluJb SINE Alu 0 312 4 1435 131 39 192 chr18 15522325 15522481 -70466453 + MLT1B LTR MaLR 345 390 0 2457 60 3 35 chr18 15523210 15523526 -70465408 - AluY SINE Alu -5 306 1 457 262 81 7 chr18 15523840 15523989 -70464945 - L3 LINE CR1 -77 1500 1341 1125 104 13 0 chr18 15523989 15524143 -70464791 - AluY SINE Alu -21 290 135 454 230 33 33 chr18 15524222 15524374 -70464560 - MER69A DNA AcHobo -3 174 23 1199 129 0 11 chr18 15524545 15524723 -70464211 + AluSp SINE Alu 136 311 -2 761 106 97 2 chr18 15524724 15524934 -70464000 - MER51B LTR ERV1 -112 265 1 359 298 149 21 chr18 15524983 15525218 -70463716 - L3 LINE CR1 -696 881 617 280 223 53 21 chr18 15525281 15525375 -70463559 - MER76 LTR ERV -275 413 317 735 126 27 0 chr18 15525383 15525494 -70463440 + AluSg SINE Alu 5 118 -192 2248 125 0 0 chr18 15525520 15525816 -70463118 + AluSx SINE Alu 1 296 -16 206 75 25 25 chr18 15525816 15525856 -70463078 + (TA)n Simple_repeat Simple_repeat 1 40 0 610 199 20 109 chr18 15525895 15526094 -70462840 - MER76 LTR ERV -447 241 61 2882 154 35 15 chr18 15526094 15526638 -70462296 + LTR10A LTR ERV1 1 555 -54 373 159 16 0 chr18 15526650 15526713 -70462221 - MER76 LTR ERV -624 64 1 532 239 28 7 chr18 15526732 15526874 -70462060 - MER20 DNA MER1_type 0 219 75 1690 138 12 0 chr18 15527009 15527256 -70461678 + AluSx SINE Alu 54 303 -9 2165 99 32 0 chr18 15527261 15527545 -70461389 + AluSc SINE Alu 2 294 -15 2457 57 0 0 chr18 15527549 15527874 -70461060 + AluSg SINE Alu 1 325 0 2525 74 0 3 chr18 15529003 15529314 -70459620 - AluSq SINE Alu -3 310 1 234 91 0 0 chr18 15529349 15529382 -70459552 + (TG)n Simple_repeat Simple_repeat 1 33 0 289 231 22 15 chr18 15529410 15529544 -70459390 + CT-rich Low_complexity Low_complexity 2 136 0 1022 200 0 0 chr18 15529544 15529719 -70459215 - FAM SINE Alu 0 175 1 1296 100 18 0 chr18 15530312 15530482 -70458452 - AluSc SINE Alu -6 303 131 2448 84 0 3 chr18 15530706 15531016 -70457918 - AluSc SINE Alu 0 309 1 26 50 0 0 chr18 15531271 15531311 -70457623 + AT_rich Low_complexity Low_complexity 1 40 0 2231 105 3 10 chr18 15531374 15531406 -70457528 - AluY SINE Alu 0 311 280 341 22 22 0 chr18 15531406 15531452 -70457482 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2231 105 3 10 chr18 15531452 15531724 -70457210 - AluY SINE Alu -31 280 9 643 93 9 9 chr18 15531732 15531834 -70457100 + (TTCC)n Simple_repeat Simple_repeat 2 104 0 2257 82 3 3 chr18 15531834 15532116 -70456818 - AluSq SINE Alu -31 282 1 2538 63 0 0 chr18 15532357 15532660 -70456274 + AluY SINE Alu 1 303 -8 1593 168 33 15 chr18 15532662 15532936 -70455998 + AluJb SINE Alu 1 279 -33 378 0 0 0 chr18 15532936 15532978 -70455956 + (CA)n Simple_repeat Simple_repeat 1 42 0 2322 115 0 6 chr18 15533041 15533353 -70455581 + AluSx SINE Alu 1 310 -2 308 254 0 14 chr18 15533423 15533494 -70455440 + MIR SINE MIR 55 124 -138 1699 189 0 7 chr18 15533529 15533844 -70455090 + AluJo SINE Alu 1 313 0 808 204 72 136 chr18 15533881 15534396 -70454538 + MLT1F LTR MaLR 1 482 -60 2381 99 0 3 chr18 15534468 15534772 -70454162 - AluSg SINE Alu -7 303 1 315 194 14 0 chr18 15534852 15534924 -70454010 + HsTC2 DNA Tc2 1823 1895 -3 3442 173 67 85 chr18 15535134 15535217 -70453717 + MER21A LTR ERV1 13 96 -835 2196 123 0 0 chr18 15535217 15535524 -70453410 - AluSx SINE Alu 0 307 1 3442 173 67 85 chr18 15535524 15536349 -70452585 + MER21A LTR ERV1 96 906 -25 1159 149 6 0 chr18 15536680 15536855 -70452079 + AluJb SINE Alu 134 309 -3 2167 104 7 7 chr18 15537022 15537302 -70451632 - AluSx SINE Alu -32 280 1 2349 94 3 3 chr18 15537460 15537757 -70451177 + AluSx SINE Alu 1 297 -15 2452 77 3 0 chr18 15537969 15538267 -70450667 + AluSx SINE Alu 2 300 -12 2286 92 3 7 chr18 15538444 15538749 -70450185 - AluSp SINE Alu -9 304 1 366 224 26 49 chr18 15538839 15538953 -70449981 + MLT1D LTR MaLR 1 99 -406 1818 234 108 64 chr18 15538971 15539676 -70449258 + MER21B LTR ERV1 19 754 -109 2418 92 0 3 chr18 15539722 15540025 -70448909 - AluSq SINE Alu -11 302 1 1106 232 79 30 chr18 15540045 15540385 -70448549 + MLT1D LTR MaLR 136 470 -35 730 191 0 0 chr18 15540403 15540539 -70448395 - FRAM SINE Alu -4 172 37 3380 101 21 0 chr18 15540656 15541131 -70447803 + LTR19A LTR ERV1 1 485 -1 2320 71 0 7 chr18 15541131 15541414 -70447520 - AluSx SINE Alu -31 281 1 2530 68 3 0 chr18 15541865 15542159 -70446775 + AluSp SINE Alu 1 295 -18 2213 90 7 20 chr18 15542822 15543121 -70445813 + AluSx SINE Alu 5 299 -13 359 94 0 0 chr18 15543986 15544039 -70444895 - FRAM/FAM SINE Alu -86 80 28 2372 93 0 7 chr18 15545923 15546224 -70442710 - AluSx SINE Alu -13 299 1 1360 251 48 43 chr18 15546618 15547156 -70441778 - MER34 LTR ERV1 0 542 2 377 203 169 8 chr18 15547607 15547725 -70441209 - L2 LINE L2 -5 3308 3172 303 290 15 0 chr18 15547989 15548176 -70440758 + (CA)n Simple_repeat Simple_repeat 1 189 0 2295 114 0 0 chr18 15549067 15549364 -70439570 - AluSx SINE Alu -15 297 1 2266 100 7 23 chr18 15550268 15550577 -70438357 - AluSx SINE Alu -8 304 1 1840 168 0 19 chr18 15551651 15551961 -70436973 + AluJo SINE Alu 1 304 -8 216 180 0 82 chr18 15553148 15553209 -70435725 - MIR SINE MIR -76 132 77 2070 126 0 23 chr18 15553582 15553718 -70435216 + AluSq SINE Alu 1 139 -174 2389 84 19 0 chr18 15553718 15554026 -70434908 + AluYb8 SINE Alu 1 314 -4 2379 110 0 0 chr18 15554028 15554336 -70434598 + AluSq SINE Alu 1 308 -5 2070 126 0 23 chr18 15554336 15554498 -70434436 + AluSq SINE Alu 140 295 -18 1822 157 21 0 chr18 15554916 15555196 -70433738 + AluJb SINE Alu 1 286 -26 195 146 0 0 chr18 15555196 15555237 -70433697 + (CA)n Simple_repeat Simple_repeat 1 41 0 2533 74 0 0 chr18 15555319 15555628 -70433306 - AluY SINE Alu -2 309 1 1368 205 30 21 chr18 15555711 15555825 -70433109 - MER2 DNA MER2_type -3 341 230 1909 131 13 48 chr18 15555825 15556139 -70432795 + AluJb SINE Alu 10 312 0 1368 205 30 21 chr18 15556139 15556361 -70432573 - MER2 DNA MER2_type -114 230 2 2399 90 0 0 chr18 15556424 15556724 -70432210 + AluSx SINE Alu 1 300 -12 237 65 0 0 chr18 15556776 15556807 -70432127 + MIR3 SINE MIR 154 184 -24 2370 102 0 0 chr18 15557429 15557734 -70431200 - AluSg SINE Alu -5 305 1 1403 165 0 4 chr18 15558035 15558272 -70430662 - MER46A DNA MER2_type 0 236 1 261 284 136 39 chr18 15558928 15559083 -70429851 - MIR SINE MIR -70 192 23 424 233 78 0 chr18 15559151 15559254 -70429680 + MER81 DNA DNA 2 112 -2 232 351 30 0 chr18 15560491 15560625 -70428309 + L1MB8 LINE L1 5802 5939 -239 1430 71 0 0 chr18 15560628 15560797 -70428137 + AluSg/x SINE Alu 129 297 -13 346 130 0 0 chr18 15560797 15560851 -70428083 + Alu SINE Alu 246 299 -3 1663 209 17 17 chr18 15561525 15561560 -70427374 - MLT1A1 LTR MaLR -10 355 321 2749 150 7 2 chr18 15561560 15561986 -70426948 + MSTA LTR MaLR 1 428 0 1663 209 17 17 chr18 15561986 15562305 -70426629 - MLT1A1 LTR MaLR -43 322 1 1910 122 58 0 chr18 15562382 15562660 -70426274 + AluSx SINE Alu 1 294 -18 437 263 26 40 chr18 15562953 15563105 -70425829 - MIR SINE MIR -65 197 48 324 212 15 109 chr18 15563292 15563357 -70425577 - L1MC4 LINE L1 -6 8036 7989 2376 90 0 3 chr18 15563357 15563657 -70425277 + AluSx SINE Alu 1 299 -13 324 212 15 109 chr18 15563657 15563728 -70425206 - L1MC4 LINE L1 -53 7989 7913 1815 181 3 3 chr18 15564354 15564657 -70424277 + AluJo SINE Alu 1 303 -9 1940 145 7 13 chr18 15564750 15565053 -70423881 - AluJo SINE Alu -11 301 1 181 258 113 16 chr18 15565065 15565127 -70423807 - L2 LINE L2 -1 3271 3204 1259 46 0 0 chr18 15565144 15565295 -70423639 + L1PA5 LINE L1 5995 6145 -9 30 0 0 0 chr18 15565295 15565325 -70423609 + AT_rich Low_complexity Low_complexity 1 30 0 900 166 26 18 chr18 15565568 15565884 -70423050 - MLT1B LTR MaLR 0 390 1 2519 63 0 0 chr18 15566162 15566464 -70422470 + AluSg SINE Alu 1 302 -8 2274 108 0 19 chr18 15566476 15566790 -70422144 + AluSx SINE Alu 5 312 0 281 242 16 0 chr18 15566832 15566894 -70422040 - MER3 DNA MER1_type -135 74 12 2285 100 3 0 chr18 15568591 15568890 -70420044 + AluSg SINE Alu 1 300 -10 2268 96 20 10 chr18 15569875 15570176 -70418758 - AluSx SINE Alu -8 304 1 228 172 75 0 chr18 15572239 15572332 -70416602 + (TA)n Simple_repeat Simple_repeat 1 100 0 380 247 73 33 chr18 15573508 15573658 -70415276 + MIR SINE MIR 106 261 -1 602 266 97 52 chr18 15575027 15575275 -70413659 + MIR SINE MIR 2 260 -2 277 204 0 0 chr18 15575367 15575416 -70413518 - L2 LINE L2 0 3313 3265 2169 97 3 36 chr18 15575749 15576057 -70412877 - AluSc SINE Alu -11 298 1 2596 51 0 0 chr18 15576133 15576427 -70412507 - AluY SINE Alu -17 294 1 2155 139 0 3 chr18 15576486 15576795 -70412139 - AluSx SINE Alu -4 308 1 2192 119 3 3 chr18 15577377 15577680 -70411254 + AluSx SINE Alu 1 303 -9 212 140 0 40 chr18 15577943 15577993 -70410941 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 1450 156 80 0 chr18 15578004 15578242 -70410692 - AluJb SINE Alu -12 300 44 2116 124 3 37 chr18 15578243 15578566 -70410368 + AluSx SINE Alu 1 312 0 2221 90 13 17 chr18 15578573 15578873 -70410061 + AluSp SINE Alu 1 299 -14 262 163 0 0 chr18 15578873 15578916 -70410018 - AluJb SINE Alu -242 60 18 233 227 0 0 chr18 15580599 15580643 -70408291 - tRNA-Ala-GCG tRNA tRNA -29 46 3 23 54 0 0 chr18 15581048 15581085 -70407849 + AT_rich Low_complexity Low_complexity 1 37 0 31 26 0 0 chr18 15581211 15581249 -70407685 + AT_rich Low_complexity Low_complexity 1 38 0 194 137 41 27 chr18 15581256 15581329 -70407605 + (TATAA)n Simple_repeat Simple_repeat 1 74 0 354 287 127 7 chr18 15581830 15581980 -70406954 - MLT1A1 LTR MaLR -2 363 196 210 291 0 0 chr18 15583002 15583057 -70405877 - MIR SINE MIR -108 154 100 382 353 106 0 chr18 15583415 15583622 -70405312 + MIR SINE MIR 34 262 0 27 0 0 0 chr18 15583922 15583949 -70404985 + AT_rich Low_complexity Low_complexity 1 27 0 288 0 0 0 chr18 15583956 15583988 -70404946 + (TG)n Simple_repeat Simple_repeat 1 32 0 * 297 0 0 0 chr18 15583987 15584020 -70404914 + (GA)n Simple_repeat Simple_repeat 1 33 0 230 193 8 160 chr18 15584835 15584954 -70403980 + AluJ/FLAM SINE Alu 1 101 -201 180 0 0 0 chr18 15585285 15585305 -70403629 + (A)n Simple_repeat Simple_repeat 1 20 0 422 259 80 92 chr18 15585305 15585430 -70403504 + MIR SINE MIR 20 142 -120 2301 109 3 3 chr18 15585430 15585742 -70403192 - AluSp SINE Alu -1 312 1 422 259 80 92 chr18 15585742 15585855 -70403079 + MIR SINE MIR 142 255 -7 1359 184 159 0 chr18 15586014 15586259 -70402675 + AluJo SINE Alu 1 284 -18 1539 159 6 86 chr18 15586376 15586715 -70402219 - AluJo SINE Alu 0 312 1 2453 100 0 0 chr18 15586944 15587254 -70401680 - AluSx SINE Alu -2 310 1 218 260 39 39 chr18 15587565 15587642 -70401292 - MIR SINE MIR -69 139 63 2244 185 38 119 chr18 15588779 15588902 -70400032 + LTR8A LTR ERV1 34 165 -562 1997 126 3 11 chr18 15588902 15589224 -70399710 - AluSx SINE Alu 0 320 1 2244 185 38 119 chr18 15589224 15589763 -70399171 + LTR8A LTR ERV1 165 631 -96 2221 118 0 23 chr18 15589763 15590067 -70398867 - AluSx SINE Alu -15 297 1 2244 185 38 119 chr18 15590067 15590157 -70398777 + LTR8A LTR ERV1 631 727 0 2247 111 0 13 chr18 15590782 15590918 -70398016 + AluSq SINE Alu 1 137 -176 2166 107 7 3 chr18 15590918 15591209 -70397725 + AluSx SINE Alu 1 292 -20 2247 111 0 13 chr18 15591209 15591379 -70397555 + AluSq SINE Alu 137 303 -10 2153 84 3 34 chr18 15591478 15591799 -70397135 + AluY SINE Alu 1 311 0 1998 158 0 3 chr18 15592075 15592386 -70396548 - AluSx SINE Alu 0 312 3 2223 115 7 0 chr18 15592416 15592712 -70396222 + AluSx SINE Alu 1 298 -14 406 263 26 0 chr18 15592948 15593062 -70395872 + MER94 DNA DNA 17 133 -1 2377 230 60 37 chr18 15593917 15594382 -70394552 + MER50 LTR ERV1 14 502 -232 2640 61 0 0 chr18 15594382 15594693 -70394241 + AluY SINE Alu 1 311 0 2377 230 60 37 chr18 15594693 15594932 -70394002 + MER50 LTR ERV1 502 734 0 213 316 16 0 chr18 15594995 15595078 -70393856 + GA-rich Low_complexity Low_complexity 1 84 0 1966 166 0 13 chr18 15595162 15595476 -70393458 - AluJb SINE Alu -2 310 1 2166 127 0 22 chr18 15595512 15595827 -70393107 + AluSx SINE Alu 2 309 -3 1928 128 4 4 chr18 15595884 15596157 -70392777 + AluSx SINE Alu 3 275 -37 279 71 0 0 chr18 15596161 15596203 -70392731 + (CAAAA)n Simple_repeat Simple_repeat 1 42 0 24 0 0 0 chr18 15597341 15597365 -70391569 + AT_rich Low_complexity Low_complexity 1 24 0 2517 57 10 0 chr18 15597432 15597730 -70391204 + AluSp SINE Alu 1 301 -12 189 0 0 0 chr18 15597754 15597775 -70391159 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2258 130 90 72 chr18 15597805 15598402 -70390532 + MER4B LTR ERV1 1 778 -1 1060 183 0 86 chr18 15598413 15598670 -70390264 - AluJo SINE Alu -77 235 1 25 0 0 0 chr18 15599683 15599708 -70389226 + GC_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr18 15599742 15599763 -70389171 + GC_rich Low_complexity Low_complexity 1 21 0 184 348 0 0 chr18 15600344 15600390 -70388544 + L2 LINE L2 3215 3260 -12 433 293 10 29 chr18 15600505 15600710 -70388224 + L1MC5 LINE L1 7269 7469 -492 810 109 16 31 chr18 15600715 15600843 -70388091 + FAM SINE Alu 42 167 -18 541 238 47 104 chr18 15600857 15600961 -70387973 + L1MC5 LINE L1 7515 7623 -338 2395 68 0 36 chr18 15600961 15601270 -70387664 + AluY SINE Alu 1 298 -13 541 238 47 104 chr18 15601270 15601539 -70387395 + L1MC5 LINE L1 7623 7864 -97 1698 198 59 67 chr18 15601539 15602048 -70386886 + MLT1D LTR MaLR 1 505 0 541 238 47 104 chr18 15602048 15602097 -70386837 + L1MC5 LINE L1 7864 7914 -47 2130 107 21 10 chr18 15602099 15602388 -70386546 + AluSg SINE Alu 2 293 -17 2225 119 3 0 chr18 15602648 15602950 -70385984 - AluSx SINE Alu -9 303 1 2149 104 0 27 chr18 15603270 15603569 -70385365 + AluSq SINE Alu 3 293 -20 1728 173 7 7 chr18 15603647 15603942 -70384992 - AluSx SINE Alu -17 295 1 561 272 8 0 chr18 15603958 15604083 -70384851 - FLAM_A SINE Alu -16 126 1 355 167 0 0 chr18 15604331 15604385 -70384549 + AluS SINE Alu 29 82 -221 739 228 40 0 chr18 15604533 15604682 -70384252 - FRAM SINE Alu -16 160 6 1205 136 118 77 chr18 15605099 15605191 -70383743 - AluJo SINE Alu 0 302 215 1885 144 0 0 chr18 15605191 15605455 -70383479 + AluJb SINE Alu 31 294 -18 1205 136 118 77 chr18 15605455 15605531 -70383403 - AluJo SINE Alu -87 215 144 279 0 0 0 chr18 15605531 15605562 -70383372 + (CA)n Simple_repeat Simple_repeat 1 31 0 1205 136 118 77 chr18 15605562 15605679 -70383255 - AluJo SINE Alu -158 144 4 2280 70 35 0 chr18 15605689 15605975 -70382959 - AluY SINE Alu -15 296 1 287 167 76 0 chr18 15605979 15606045 -70382889 + LTR50 LTR ERVL 717 787 -8 2485 191 21 8 chr18 15606131 15606653 -70382281 - LTR27 LTR ERV1 0 501 2 1099 270 49 18 chr18 15606655 15607044 -70381890 - L1ME3A LINE L1 -334 5836 5436 572 147 186 0 chr18 15607045 15607174 -70381760 - MLT1F LTR MaLR -2 540 388 3575 184 134 16 chr18 15607178 15607915 -70381019 + LTR1B LTR ERV1 1 824 -2 618 197 24 2 chr18 15608089 15608225 -70380709 - MLT1F1 LTR MaLR -419 136 1 961 109 7 15 chr18 15608246 15608383 -70380551 - AluJo SINE Alu -176 136 1 2014 135 14 3 chr18 15608399 15608695 -70380239 - AluSq SINE Alu -14 299 1 561 272 8 0 chr18 15608711 15608836 -70380098 - FLAM_A SINE Alu -16 126 1 1455 181 30 23 chr18 15609084 15609350 -70379584 + AluSx SINE Alu 29 296 -16 1230 243 71 38 chr18 15609701 15610150 -70378784 - MLT1E1 LTR MaLR -51 603 140 251 266 0 0 chr18 15610128 15610192 -70378742 + Alu SINE Alu 230 293 -7 * 2124 123 0 7 chr18 15610253 15610553 -70378381 - AluSx SINE Alu -14 298 1 2150 95 21 3 chr18 15610583 15610868 -70378066 + AluSx SINE Alu 1 290 -22 2325 103 0 7 chr18 15610970 15611271 -70377663 + AluSg SINE Alu 1 299 -11 1870 139 3 42 chr18 15611341 15611650 -70377284 + AluJb SINE Alu 1 297 -15 1896 172 8 72 chr18 15612688 15613078 -70375856 + MLT1A1 LTR MaLR 1 365 0 1102 150 30 33 chr18 15613213 15613447 -70375487 + AluJb SINE Alu 1 304 -8 273 222 0 0 chr18 15613447 15613510 -70375424 + GA-rich Low_complexity Low_complexity 3 65 0 2509 77 0 0 chr18 15613713 15614024 -70374910 + AluY SINE Alu 1 311 0 426 298 9 0 chr18 15614055 15614169 -70374765 + MIR SINE MIR 148 262 0 799 169 0 22 chr18 15614673 15614809 -70374125 - FLAM_C SINE Alu 0 133 1 2287 116 0 0 chr18 15615139 15615441 -70373493 - AluSx SINE Alu -10 302 1 1311 146 12 61 chr18 15616061 15616307 -70372627 + AluJo SINE Alu 79 312 0 251 263 38 0 chr18 15616317 15616397 -70372537 + Charlie2 DNA MER1_type 2780 2862 0 2484 73 7 0 chr18 15616478 15616781 -70372153 - AluY SINE Alu -6 305 1 1399 98 0 5 chr18 15616957 15617141 -70371793 + AluSg/x SINE Alu 130 312 0 232 246 15 62 chr18 15617211 15617276 -70371658 - L2 LINE L2 -10 3262 3201 2806 201 35 24 chr18 15617284 15617435 -70371499 + MER82 DNA MER2_type 11 159 -494 2402 94 0 0 chr18 15617435 15617732 -70371202 - AluSx SINE Alu -15 297 1 2806 201 35 24 chr18 15617732 15617771 -70371163 + MER82 DNA MER2_type 159 196 -457 2539 65 0 0 chr18 15617771 15618078 -70370856 - AluY SINE Alu -4 307 1 2806 201 35 24 chr18 15618078 15618522 -70370412 + MER82 DNA MER2_type 196 653 0 2970 176 32 23 chr18 15618574 15619189 -70369745 + Tigger3b DNA MER2_type 1 621 -610 180 97 0 0 chr18 15619191 15619222 -70369712 + (TA)n Simple_repeat Simple_repeat 2 32 0 2104 112 24 0 chr18 15619242 15619404 -70369530 - AluY SINE Alu -17 294 120 183 42 0 0 chr18 15619404 15619428 -70369506 + (TTTTG)n Simple_repeat Simple_repeat 5 28 0 2104 112 24 0 chr18 15619428 15619552 -70369382 - AluY SINE Alu -191 120 1 1041 197 11 0 chr18 15619571 15619775 -70369159 + FRAM SINE Alu 1 202 0 3009 118 83 19 chr18 15619776 15620099 -70368835 + Tigger3b DNA MER2_type 617 918 -2111 2370 67 7 0 chr18 15620099 15620405 -70368529 - AluSp SINE Alu 0 308 1 3009 118 83 19 chr18 15620405 15620658 -70368276 + Tigger3b DNA MER2_type 918 1231 -1 1394 121 40 0 chr18 15620695 15620918 -70368016 + AluSx SINE Alu 1 232 -80 342 0 0 0 chr18 15621018 15621056 -70367878 + (GAAA)n Simple_repeat Simple_repeat 4 41 0 2358 175 106 58 chr18 15621056 15621162 -70367772 - LTR8A LTR ERV1 -43 684 584 1887 88 69 110 chr18 15621162 15621481 -70367453 - AluSg SINE Alu 0 310 5 2358 175 106 58 chr18 15621481 15622027 -70366907 - LTR8A LTR ERV1 -143 584 1 234 0 0 0 chr18 15622068 15622094 -70366840 + (TTA)n Simple_repeat Simple_repeat 3 28 0 1623 153 7 43 chr18 15622097 15622379 -70366555 - AluJb SINE Alu -23 289 18 4233 87 0 19 chr18 15622388 15622829 -70366105 + MER41A LTR ERV1 1 430 -124 2708 48 0 0 chr18 15622829 15623139 -70365795 - AluY SINE Alu -1 310 1 4233 87 0 19 chr18 15623139 15623262 -70365672 + MER41A LTR ERV1 430 554 0 450 225 56 21 chr18 15623280 15623422 -70365512 + L1ME3A LINE L1 5230 5376 -770 1202 125 6 6 chr18 15623445 15623621 -70365313 - AluSq SINE Alu -13 300 125 2149 115 14 3 chr18 15623679 15623975 -70364959 + AluSq SINE Alu 1 299 -14 961 109 7 15 chr18 15623991 15624128 -70364806 + AluJo SINE Alu 1 136 -176 618 205 23 2 chr18 15624149 15624293 -70364641 + MLT1F1 LTR MaLR 1 144 -411 644 188 192 20 chr18 15624306 15624413 -70364521 + MLT1F1 LTR MaLR 248 335 -232 3784 186 135 6 chr18 15624413 15625144 -70363790 - LTR1B LTR ERV1 0 826 1 644 188 192 20 chr18 15625144 15625277 -70363657 + MLT1F1 LTR MaLR 335 565 -2 1099 270 49 18 chr18 15625278 15625667 -70363267 + L1ME3A LINE L1 5436 5836 -334 2485 191 21 8 chr18 15625669 15626191 -70362743 + LTR27 LTR ERV1 2 501 0 287 167 76 0 chr18 15626277 15626343 -70362591 - LTR50 LTR ERVL -8 787 717 2280 70 35 0 chr18 15626347 15626633 -70362301 + AluY SINE Alu 1 296 -15 1231 132 118 77 chr18 15626643 15626760 -70362174 + AluJo SINE Alu 4 115 -187 279 0 0 0 chr18 15626760 15626791 -70362143 + (TG)n Simple_repeat Simple_repeat 1 31 0 1231 132 118 77 chr18 15626791 15626867 -70362067 + AluJo SINE Alu 115 186 -116 1885 144 0 0 chr18 15626867 15627131 -70361803 - AluJb SINE Alu -18 294 31 1231 132 118 77 chr18 15627131 15627223 -70361711 + AluJo SINE Alu 186 302 0 739 228 40 0 chr18 15627639 15627788 -70361146 + FRAM SINE Alu 6 160 -16 25 23 0 23 chr18 15629058 15629079 -70359855 + AT_rich Low_complexity Low_complexity 1 21 -21 2053 143 0 3 chr18 15629079 15629380 -70359554 + AluSx SINE Alu 1 300 -12 25 23 0 23 chr18 15629380 15629401 -70359533 + AT_rich Low_complexity Low_complexity 21 42 0 366 295 18 0 chr18 15629402 15629514 -70359420 + L1ME3A LINE L1 6052 6165 -5 2192 96 18 0 chr18 15630339 15630620 -70358314 + AluSg SINE Alu 1 286 -24 1723 138 10 24 chr18 15630978 15631267 -70357667 + AluJb SINE Alu 11 295 -17 1661 161 49 35 chr18 15631403 15631689 -70357245 - AluJo SINE Alu -22 290 1 2214 115 3 6 chr18 15631954 15632266 -70356668 - AluY SINE Alu 0 311 1 596 188 79 59 chr18 15632270 15632472 -70356462 + LTR50 LTR ERVL 1 206 -589 674 232 115 47 chr18 15632528 15632707 -70356227 + LTR50 LTR ERVL 430 595 -200 2586 139 66 2 chr18 15632707 15633132 -70355802 - LTR47A LTR ERVL 0 452 1 674 232 115 47 chr18 15633132 15633200 -70355734 + LTR50 LTR ERVL 595 657 -138 2175 99 51 3 chr18 15633200 15633492 -70355442 - AluSq SINE Alu -7 306 1 674 232 115 47 chr18 15633492 15633507 -70355427 + LTR50 LTR ERVL 657 670 -125 2419 103 3 0 chr18 15633507 15633819 -70355115 - AluSp SINE Alu 0 313 1 674 232 115 47 chr18 15633819 15633894 -70355040 + LTR50 LTR ERVL 670 792 -3 1835 136 29 58 chr18 15634173 15634482 -70354452 - AluJb SINE Alu -12 300 1 2514 51 0 35 chr18 15634487 15634798 -70354136 - AluY SINE Alu -11 300 1 457 262 81 7 chr18 15635112 15635261 -70353673 - L3 LINE CR1 -77 1500 1341 1125 104 13 0 chr18 15635261 15635415 -70353519 - AluY SINE Alu -21 290 135 454 230 33 33 chr18 15635494 15635646 -70353288 - MER69A DNA AcHobo -3 174 23 1269 131 0 0 chr18 15635817 15635993 -70352941 + AluSp SINE Alu 136 311 -2 761 106 97 2 chr18 15635994 15636204 -70352730 - MER51B LTR ERV1 -112 265 1 359 298 149 21 chr18 15636253 15636488 -70352446 - L3 LINE CR1 -696 881 617 280 223 53 21 chr18 15636551 15636645 -70352289 - MER76 LTR ERV -275 413 317 735 126 27 0 chr18 15636653 15636764 -70352170 + AluSg SINE Alu 5 118 -192 25 0 0 0 chr18 15636764 15636789 -70352145 + AT_rich Low_complexity Low_complexity 1 25 0 2248 125 0 0 chr18 15636789 15637085 -70351849 + AluSx SINE Alu 1 296 -16 206 75 25 25 chr18 15637085 15637125 -70351809 + (TA)n Simple_repeat Simple_repeat 1 40 0 614 200 25 110 chr18 15637164 15637362 -70351572 - MER76 LTR ERV -447 241 61 2882 154 35 15 chr18 15637362 15637906 -70351028 + LTR10A LTR ERV1 1 555 -54 373 159 16 0 chr18 15637918 15637981 -70350953 - MER76 LTR ERV -624 64 1 949 210 23 14 chr18 15638000 15638214 -70350720 - MER20 DNA MER1_type 0 219 4 231 237 9 140 chr18 15638503 15638617 -70350317 + L2 LINE L2 3141 3239 -33 234 322 63 40 chr18 15638641 15638800 -70350134 - L2 LINE L2 -1208 2106 1941 2255 121 0 0 chr18 15638800 15639097 -70349837 + AluSg SINE Alu 1 297 -13 234 322 63 40 chr18 15639097 15639111 -70349823 - L2 LINE L2 -1373 1941 1929 1260 163 93 0 chr18 15639151 15639408 -70349526 - LTR35 LTR ERV1 -169 449 169 1941 128 53 0 chr18 15639416 15639697 -70349237 + AluSq SINE Alu 1 296 -17 216 175 0 25 chr18 15639700 15639740 -70349194 + C-rich Low_complexity Low_complexity 5 43 0 10122 29 15 172 chr18 15639740 15641420 -70347514 + SVA Other Other 1 1422 0 185 23 70 23 chr18 15641498 15641541 -70347393 + A-rich Low_complexity Low_complexity 1 45 0 197 288 34 0 chr18 15641797 15641856 -70347078 - L2 LINE L2 -2941 373 313 279 54 0 0 chr18 15641856 15641893 -70347041 + (TG)n Simple_repeat Simple_repeat 1 37 0 2137 113 10 0 chr18 15642174 15642297 -70346637 + AluSx SINE Alu 1 121 -191 183 80 0 0 chr18 15642297 15642322 -70346612 + (TA)n Simple_repeat Simple_repeat 1 25 0 2137 113 10 0 chr18 15642322 15642489 -70346445 + AluSx SINE Alu 121 294 -18 21 82 0 0 chr18 15642497 15642546 -70346388 + AT_rich Low_complexity Low_complexity 1 49 0 310 243 133 49 chr18 15642546 15642772 -70346162 + L1MC5 LINE L1 7499 7743 -218 2284 113 0 0 chr18 15642778 15643070 -70345864 - AluSx SINE Alu -20 292 1 22 35 0 0 chr18 15643212 15643241 -70345693 + AT_rich Low_complexity Low_complexity 1 29 0 703 167 75 0 chr18 15644114 15644234 -70344700 - FLAM_C SINE Alu -2 131 3 2263 95 0 77 chr18 15644262 15644599 -70344335 - AluY SINE Alu 0 311 1 1778 155 36 11 chr18 15645549 15645827 -70343107 + AluJo SINE Alu 1 285 -27 2430 76 3 0 chr18 15645827 15646129 -70342805 - AluY SINE Alu -8 303 1 2368 98 0 19 chr18 15646138 15646454 -70342480 - AluSq SINE Alu -3 310 1 181 185 108 31 chr18 15647034 15647099 -70341835 - L2 LINE L2 -497 2817 2748 1593 165 110 32 chr18 15648182 15648256 -70340678 - MER69 DNA AcHobo -2 2524 2457 1860 137 29 29 chr18 15648256 15648383 -70340551 + AluSp SINE Alu 2 128 -185 2687 46 0 3 chr18 15648383 15648690 -70340244 + AluY SINE Alu 1 306 -5 1860 137 29 29 chr18 15648690 15648869 -70340065 + AluSp SINE Alu 127 308 -5 1593 165 110 32 chr18 15648869 15649268 -70339666 - MER69 DNA AcHobo -69 2457 2014 1248 265 152 20 chr18 15649276 15649770 -70339164 - MER69 DNA AcHobo -1967 559 1 254 267 84 46 chr18 15650580 15650711 -70338223 - HAL1 LINE L1 -370 2137 2002 598 217 70 0 chr18 15650790 15650947 -70337987 - MER5A DNA MER1_type 0 189 22 1811 131 0 26 chr18 15651013 15651318 -70337616 - AluSx SINE Alu -2 310 14 2003 122 14 7 chr18 15651596 15651924 -70337010 - AluJo SINE Alu 0 330 1 1851 123 33 63 chr18 15652448 15652615 -70336319 - AluSx SINE Alu -18 294 138 2332 96 0 3 chr18 15652615 15652916 -70336018 - AluSx SINE Alu -12 300 1 1851 123 33 63 chr18 15652916 15653049 -70335885 - AluSx SINE Alu -174 138 3 577 231 0 0 chr18 15653084 15653243 -70335691 + FLAM_A SINE Alu 1 159 0 2942 10 0 0 chr18 15653447 15653758 -70335176 + AluYa5 SINE Alu 1 311 0 278 145 226 0 chr18 15653770 15653832 -70335102 + L1MC1 LINE L1 6245 6320 -13 1787 117 38 45 chr18 15654395 15654558 -70334376 - AluSx SINE Alu -14 298 136 2247 109 7 3 chr18 15654558 15654860 -70334074 - AluSq SINE Alu -10 303 1 1787 117 38 45 chr18 15654860 15654986 -70333948 - AluSx SINE Alu -176 136 11 2327 100 3 3 chr18 15655260 15655560 -70333374 + AluSc SINE Alu 1 300 -9 2313 66 40 23 chr18 15655560 15655861 -70333073 + AluY SINE Alu 1 306 -5 1458 133 39 192 chr18 15656589 15656745 -70332189 - MLT1B LTR MaLR 0 390 212 1658 173 39 29 chr18 15656745 15657051 -70331883 + AluJb SINE Alu 4 312 0 2335 127 21 0 chr18 15657051 15657430 -70331504 + L1PA16 LINE L1 5776 6162 -4 1458 133 39 192 chr18 15657430 15657730 -70331204 - MLT1B LTR MaLR -176 214 3 1916 140 7 3 chr18 15657869 15658162 -70330772 - AluSg SINE Alu -16 294 1 687 138 0 113 chr18 15658652 15658811 -70330123 + AluJb SINE Alu 2 142 -170 305 283 75 0 chr18 15658855 15658961 -70329973 + L3b LINE CR1 1268 1381 -202 2516 67 0 3 chr18 15659376 15659688 -70329246 - AluY SINE Alu 0 311 1 2486 61 7 3 chr18 15659719 15660029 -70328905 - AluY SINE Alu 0 311 1 1023 106 0 0 chr18 15660031 15660163 -70328771 - AluY SINE Alu -179 132 1 2234 102 3 3 chr18 15660165 15660459 -70328475 - AluSx SINE Alu -18 294 1 232 300 0 17 chr18 15660460 15660520 -70328414 - L2 LINE L2 -12 3301 3243 335 303 21 41 chr18 15660614 15660759 -70328175 - MIR SINE MIR -119 143 2 2517 70 0 0 chr18 15661075 15661377 -70327557 - AluSc SINE Alu -7 302 1 411 209 0 87 chr18 15662740 15662983 -70325951 + (CGGGG)n Simple_repeat Simple_repeat 1 221 0 2470 74 7 0 chr18 15664022 15664320 -70324614 + AluSq SINE Alu 1 300 -13 1553 167 110 32 chr18 15665994 15666068 -70322866 - MER69 DNA AcHobo -2 2524 2457 1960 132 29 26 chr18 15666068 15666195 -70322739 + AluSp SINE Alu 2 127 -186 2704 45 0 3 chr18 15666195 15666504 -70322430 + AluY SINE Alu 1 308 -3 1960 132 29 26 chr18 15666504 15666686 -70322248 + AluSp SINE Alu 127 312 -1 1553 167 110 32 chr18 15666686 15667085 -70321849 - MER69 DNA AcHobo -69 2457 2014 1248 265 152 20 chr18 15667093 15667587 -70321347 - MER69 DNA AcHobo -1967 559 1 254 267 84 46 chr18 15668397 15668528 -70320406 - HAL1 LINE L1 -370 2137 2002 598 217 70 0 chr18 15668607 15668764 -70320170 - MER5A DNA MER1_type 0 189 22 1340 255 73 23 chr18 15668783 15668830 -70320104 - L1ME LINE L1 -360 5810 5767 2252 129 0 0 chr18 15668830 15669140 -70319794 - AluSx SINE Alu -2 310 1 1340 255 73 23 chr18 15669140 15669511 -70319423 - L1ME LINE L1 -403 5767 5367 2586 75 0 0 chr18 15669511 15669816 -70319118 - AluSx SINE Alu -7 305 1 1340 255 73 23 chr18 15669816 15669835 -70319099 - L1ME LINE L1 -803 5367 5350 945 261 122 21 chr18 15669916 15670341 -70318593 - L2 LINE L2 -528 2786 2319 1133 149 50 30 chr18 15670341 15670542 -70318392 - AluJb SINE Alu -11 301 97 268 262 20 74 chr18 15670644 15670793 -70318141 - HAL1 LINE L1 -1731 776 636 228 259 93 19 chr18 15671799 15671907 -70317027 - L2 LINE L2 -192 3080 2965 534 256 72 6 chr18 15672326 15672506 -70316428 + MIR SINE MIR 56 247 -15 731 204 58 121 chr18 15673083 15673357 -70315577 - MLT2D LTR ERVL -88 326 77 2223 112 7 0 chr18 15673357 15673652 -70315282 - AluSx SINE Alu -15 297 1 731 204 58 121 chr18 15673652 15673725 -70315209 - MLT2D LTR ERVL -337 77 1 251 270 101 0 chr18 15674627 15674716 -70314218 - MIR SINE MIR -48 214 117 1881 161 3 7 chr18 15675603 15675902 -70313032 + AluJb SINE Alu 1 298 -14 449 275 136 34 chr18 15676652 15677032 -70311902 - MLT1J LTR MaLR -87 395 1 263 291 44 76 chr18 15677375 15677533 -70311401 - L2 LINE L2 0 3313 3161 239 366 38 0 chr18 15677816 15677947 -70310987 - L2 LINE L2 -534 2780 2645 217 241 35 0 chr18 15678171 15678229 -70310705 + MER5A DNA MER1_type 35 94 -95 393 245 20 7 chr18 15678335 15678486 -70310448 + (CA)n Simple_repeat Simple_repeat 1 153 0 207 125 0 0 chr18 15678510 15678550 -70310384 + (CA)n Simple_repeat Simple_repeat 2 41 0 1669 176 11 0 chr18 15679396 15679710 -70309224 + AluJo SINE Alu 1 317 0 24 0 0 0 chr18 15680429 15680453 -70308481 + GC_rich Low_complexity Low_complexity 1 24 0 1041 150 21 21 chr18 15681658 15681851 -70307083 - AluJo SINE Alu 0 312 120 2594 60 0 0 chr18 15682117 15682416 -70306518 - AluY SINE Alu -12 299 1 2232 98 3 0 chr18 15682461 15682748 -70306186 + AluSg SINE Alu 11 298 -12 1782 160 42 7 chr18 15683997 15684284 -70304650 + AluJb SINE Alu 5 301 -11 338 161 0 0 chr18 15684284 15684340 -70304594 + L1M2 LINE L1 5509 5564 -748 372 113 5 5 chr18 15684341 15684411 -70304523 + Alu SINE Alu 241 298 -4 2478 84 0 6 chr18 15684413 15684724 -70304210 + AluSq SINE Alu 1 309 -4 246 284 49 0 chr18 15684749 15684830 -70304104 + MIR3 SINE MIR 91 175 -33 2161 142 0 16 chr18 15684866 15685183 -70303751 + AluSx SINE Alu 1 312 0 2277 97 21 0 chr18 15686037 15686327 -70302607 - AluSx SINE Alu -16 296 1 1188 144 0 0 chr18 15686838 15687005 -70301929 + FRAM SINE Alu 1 164 -12 2281 87 3 3 chr18 15688352 15688641 -70300293 + AluSg SINE Alu 1 289 -21 509 252 115 0 chr18 15688738 15688877 -70300057 + MER3 DNA MER1_type 42 196 -13 979 56 28 33 chr18 15689057 15689237 -70299697 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 202 94 0 31 chr18 15689237 15689269 -70299665 + (TTCC)n Simple_repeat Simple_repeat 1 31 0 1268 144 0 0 chr18 15689269 15689456 -70299478 - AluSp SINE Alu -2 311 125 2178 80 15 101 chr18 15689456 15689793 -70299141 - AluSq SINE Alu 0 313 6 230 208 62 52 chr18 15690311 15690407 -70298527 - LTR33 LTR ERVL 0 521 425 1155 198 14 0 chr18 15690587 15690799 -70298135 + AluJo SINE Alu 90 304 -8 182 273 106 0 chr18 15690879 15690945 -70297989 - L2 LINE L2 -1036 2278 2206 2324 96 24 0 chr18 15697928 15698221 -70290713 - AluSx SINE Alu -12 300 1 533 254 67 18 chr18 15698221 15698386 -70290548 + MIR SINE MIR 63 235 -27 198 103 0 0 chr18 15698513 15698542 -70290392 + (TC)n Simple_repeat Simple_repeat 2 30 0 338 210 78 60 chr18 15698802 15698969 -70289965 - L1MC5 LINE L1 -189 7772 7603 2098 144 0 10 chr18 15699082 15699394 -70289540 - AluSx SINE Alu -3 309 1 2430 97 3 0 chr18 15699434 15699743 -70289191 - AluSq SINE Alu -3 310 1 2675 183 45 36 chr18 15700075 15700323 -70288611 - Charlie1 DNA MER1_type -112 2649 2405 1715 168 16 10 chr18 15700323 15700627 -70288307 - AluJo SINE Alu -6 306 1 2675 183 45 36 chr18 15700627 15700761 -70288173 - Charlie1 DNA MER1_type -356 2405 2274 2009 129 3 45 chr18 15700761 15701070 -70287864 - AluSx SINE Alu -16 296 1 2675 183 45 36 chr18 15701070 15701375 -70287559 - Charlie1 DNA MER1_type -487 2274 1955 2043 135 18 0 chr18 15701393 15701675 -70287259 - AluSx SINE Alu -25 287 1 300 27 0 0 chr18 15701678 15701715 -70287219 + (ATTG)n Simple_repeat Simple_repeat 4 40 0 2149 115 4 0 chr18 15701716 15701995 -70286939 - AluSp SINE Alu -33 280 1 342 314 66 87 chr18 15701999 15702426 -70286508 - HAL1 LINE L1 -1187 1320 903 1600 175 28 11 chr18 15702612 15702897 -70286037 + AluJo SINE Alu 1 290 -22 1744 162 40 3 chr18 15703021 15703317 -70285617 - AluSx SINE Alu -5 307 1 353 262 43 59 chr18 15703521 15703708 -70285226 - L1MB5 LINE L1 0 6174 5991 2222 73 42 14 chr18 15703749 15704037 -70284897 + AluSx SINE Alu 1 296 -16 1663 209 17 17 chr18 15704656 15704691 -70284243 - MLT1A1 LTR MaLR -10 355 321 2713 155 7 2 chr18 15704691 15705117 -70283817 + MSTA LTR MaLR 1 428 0 1663 209 17 17 chr18 15705117 15705436 -70283498 - MLT1A1 LTR MaLR -43 322 1 1933 119 58 0 chr18 15705513 15705791 -70283143 + AluSx SINE Alu 1 294 -18 437 263 26 40 chr18 15706084 15706236 -70282698 - MIR SINE MIR -65 197 48 2361 93 0 3 chr18 15706488 15706788 -70282146 + AluSx SINE Alu 1 299 -13 233 190 139 0 chr18 15706789 15706868 -70282066 - L1MC4 LINE L1 -58 7984 7895 433 148 0 0 chr18 15707484 15707545 -70281389 + AluS SINE Alu 2 62 -256 1804 136 7 15 chr18 15707972 15708245 -70280689 - AluJo SINE Alu -41 271 1 181 258 113 16 chr18 15708257 15708319 -70280615 - L2 LINE L2 -1 3271 3204 1289 27 0 0 chr18 15708336 15708484 -70280450 + L1PA5 LINE L1 5995 6142 -12 28 0 0 0 chr18 15708484 15708512 -70280422 + AT_rich Low_complexity Low_complexity 1 28 0 900 169 26 18 chr18 15708755 15709071 -70279863 - MLT1B LTR MaLR 0 390 1 339 234 200 69 chr18 15709292 15709349 -70279585 - MER3 DNA MER1_type 0 209 161 2504 66 0 0 chr18 15709349 15709651 -70279283 + AluSg SINE Alu 1 302 -8 339 234 200 69 chr18 15709651 15709663 -70279271 - MER3 DNA MER1_type -48 161 152 2290 105 0 19 chr18 15709663 15709977 -70278957 + AluSx SINE Alu 5 312 0 339 234 200 69 chr18 15709977 15710081 -70278853 - MER3 DNA MER1_type -57 152 12 2272 101 3 0 chr18 15711779 15712077 -70276857 + AluSg SINE Alu 1 299 -11 2241 100 20 13 chr18 15713065 15713366 -70275568 - AluSx SINE Alu -9 303 1 228 172 75 0 chr18 15715429 15715522 -70273412 + (TA)n Simple_repeat Simple_repeat 1 100 0 380 247 73 33 chr18 15716699 15716849 -70272085 + MIR SINE MIR 106 261 -1 602 266 97 52 chr18 15718218 15718466 -70270468 + MIR SINE MIR 2 260 -2 277 204 0 0 chr18 15718558 15718607 -70270327 - L2 LINE L2 0 3313 3265 2169 97 3 36 chr18 15718940 15719248 -70269686 - AluSc SINE Alu -11 298 1 2363 75 3 0 chr18 15719324 15719618 -70269316 - AluY SINE Alu -16 295 1 2393 86 0 22 chr18 15719627 15719940 -70268994 - AluSq SINE Alu -7 306 1 2338 103 0 0 chr18 15719949 15720251 -70268683 - AluSq SINE Alu -11 302 1 21 0 0 0 chr18 15720329 15720350 -70268584 + AT_rich Low_complexity Low_complexity 1 21 0 710 190 41 0 chr18 15720409 15720530 -70268404 - FLAM_C SINE Alu -7 126 1 2112 123 0 49 chr18 15720606 15720914 -70268020 - AluSx SINE Alu -19 293 1 1321 181 113 4 chr18 15720985 15721251 -70267683 + AluJo SINE Alu 1 295 -17 2457 91 0 0 chr18 15721256 15721564 -70267370 + AluSg1 SINE Alu 1 308 -1 408 261 23 0 chr18 15721598 15721686 -70267248 + L1MC4 LINE L1 6614 6703 -1339 2536 64 0 0 chr18 15721689 15721985 -70266949 - AluY SINE Alu -15 296 1 381 43 0 0 chr18 15722609 15722656 -70266278 + (TG)n Simple_repeat Simple_repeat 2 48 0 263 167 0 0 chr18 15722768 15722810 -70266124 + Alu SINE Alu 1 42 -260 230 250 0 15 chr18 15722812 15722880 -70266054 + (TGAA)n Simple_repeat Simple_repeat 1 67 0 1528 156 13 70 chr18 15723108 15723301 -70265633 - AluJb SINE Alu -3 309 139 2218 115 0 7 chr18 15723301 15723605 -70265329 + AluSq SINE Alu 1 302 -11 1528 156 13 70 chr18 15723605 15723726 -70265208 - AluJb SINE Alu -173 139 13 2186 120 0 19 chr18 15723831 15724140 -70264794 - AluSg SINE Alu -7 303 1 262 163 0 0 chr18 15725556 15725599 -70263335 + AluJb SINE Alu 18 60 -242 1845 123 13 26 chr18 15725599 15725901 -70263033 - AluSp SINE Alu -15 298 1 2161 118 3 34 chr18 15725909 15726231 -70262703 - AluSx SINE Alu 0 312 1 1531 156 58 0 chr18 15726232 15726475 -70262459 + AluJb SINE Alu 44 300 -12 212 140 0 40 chr18 15726486 15726536 -70262398 + (CAAAA)n Simple_repeat Simple_repeat 3 50 0 2192 119 3 3 chr18 15726799 15727102 -70261832 - AluSx SINE Alu -9 303 1 2155 139 0 3 chr18 15727685 15727994 -70260940 + AluSx SINE Alu 1 308 -4 2545 72 0 0 chr18 15728053 15728360 -70260574 + AluY SINE Alu 1 307 -4 647 181 17 0 chr18 15729103 15729219 -70259715 - MLT1B LTR MaLR 0 390 273 1001 148 68 12 chr18 15729259 15729421 -70259513 + AluJo SINE Alu 4 174 -138 396 0 0 0 chr18 15729532 15729576 -70259358 + (TA)n Simple_repeat Simple_repeat 2 45 0 1906 133 13 70 chr18 15729799 15730115 -70258819 - AluSx SINE Alu -14 298 1 212 352 29 9 chr18 15730269 15730374 -70258560 + MIR SINE MIR 39 145 -117 469 286 85 8 chr18 15730917 15731176 -70257758 + L1ME LINE L1 5544 5822 -299 1792 141 0 0 chr18 15731270 15731518 -70257416 + AluSx SINE Alu 49 296 -16 190 79 26 26 chr18 15731733 15731771 -70257163 + (TCCC)n Simple_repeat Simple_repeat 3 40 0 1084 128 66 43 chr18 15731779 15731990 -70256944 - L1MC1 LINE L1 -11 6322 6107 4129 131 39 6 chr18 15731992 15732605 -70256329 - L1MC1 LINE L1 -261 6072 5421 2061 116 32 0 chr18 15732605 15732889 -70256045 - AluSg SINE Alu -17 293 1 4129 131 39 6 chr18 15732889 15733002 -70255932 - L1MC1 LINE L1 -912 5421 5313 2316 98 7 0 chr18 15733055 15733352 -70255582 - AluSp SINE Alu -14 299 1 203 216 0 0 chr18 15733562 15733599 -70255335 - L2 LINE L2 0 3313 3277 1786 168 0 32 chr18 15734587 15734903 -70254031 - AluJo SINE Alu -6 306 1 2102 132 7 3 chr18 15736124 15736434 -70252500 - AluY SINE Alu 0 311 1 2305 101 10 0 chr18 15736444 15736741 -70252193 - AluSq SINE Alu -13 300 1 236 275 246 0 chr18 15736891 15737033 -70251901 + MER5A DNA MER1_type 7 183 -6 1749 159 42 10 chr18 15738173 15738462 -70250472 - AluJb SINE Alu -14 298 1 2242 121 10 0 chr18 15738605 15738902 -70250032 + AluSx SINE Alu 1 300 -12 1093 169 109 5 chr18 15739387 15739588 -70249346 + AluJo SINE Alu 29 250 -62 1401 162 0 4 chr18 15739589 15739817 -70249117 + AluJo SINE Alu 85 311 -1 209 282 128 0 chr18 15740376 15740454 -70248480 + MIR SINE MIR 29 116 -92 1102 219 60 98 chr18 15740546 15741026 -70247908 - MER4C LTR ERV1 -3 462 1 302 271 153 0 chr18 15741455 15741573 -70247361 + MIR SINE MIR 69 204 -58 1909 160 0 0 chr18 15741954 15742236 -70246698 + AluSx SINE Alu 20 301 -11 198 286 18 0 chr18 15743134 15743190 -70245744 - MIR3 SINE MIR -8 200 144 1854 130 98 0 chr18 15743893 15744169 -70244765 - AluSx SINE Alu -9 303 1 408 235 50 8 chr18 15744382 15744501 -70244433 - MER65A LTR ERV1 -321 124 1 2319 86 0 7 chr18 15744683 15744974 -70243960 + AluSq SINE Alu 1 289 -24 25 0 0 0 chr18 15745650 15745675 -70243259 + GC_rich Low_complexity Low_complexity 1 25 0 2038 141 7 0 chr18 15746627 15746932 -70242002 + AluSq SINE Alu 1 307 -6 204 40 0 0 chr18 15747285 15747310 -70241624 + (T)n Simple_repeat Simple_repeat 1 25 0 487 248 54 16 chr18 15747645 15747774 -70241160 + MIR SINE MIR 59 192 -70 686 264 78 78 chr18 15747786 15748308 -70240626 - MER34 LTR ERV1 -4 538 17 849 220 34 70 chr18 15748389 15748876 -70240058 - MER34-int LTR ERV1 -164 6167 4415 289 245 104 19 chr18 15748909 15749015 -70239919 - LTR37A LTR ERV1 -309 117 3 1359 158 19 9 chr18 15749049 15749264 -70239670 + AluJo SINE Alu 4 220 -92 367 195 39 0 chr18 15749274 15749351 -70239583 - AluJ/FRAM SINE Alu -4 298 219 280 350 51 26 chr18 15749452 15749569 -70239365 + L2 LINE L2 3123 3242 -30 235 219 16 31 chr18 15749574 15749638 -70239296 - MIR SINE MIR 0 262 200 697 263 103 39 chr18 15749641 15750048 -70238886 + MER34 LTR ERV1 13 445 -97 880 142 15 0 chr18 15750051 15750185 -70238749 - AluJo SINE Alu -176 136 1 2321 100 3 7 chr18 15750191 15750491 -70238443 - AluSx SINE Alu -11 301 3 291 204 39 48 chr18 15750498 15750601 -70238333 + MER34 LTR ERV1 432 533 -9 366 245 106 45 chr18 15750675 15750920 -70238014 + MER34-int LTR ERV1 72 331 -6000 845 276 131 55 chr18 15751044 15751706 -70237228 + MER34-int LTR ERV1 371 1024 -5307 967 210 92 48 chr18 15751731 15752088 -70236846 - MLT1A2 LTR MaLR -1 373 1 1477 141 0 39 chr18 15752091 15752232 -70236702 - MLT1A2-int LTR MaLR 0 1735 1607 1472 148 43 36 chr18 15752232 15752536 -70236398 + AluJb SINE Alu 1 306 -6 1477 141 0 39 chr18 15752536 15752650 -70236284 - MLT1A2-int LTR MaLR -128 1607 1490 485 136 0 0 chr18 15752655 15752724 -70236210 - MER41B LTR ERV1 0 635 567 1933 131 3 0 chr18 15752724 15753006 -70235928 + AluSx SINE Alu 1 283 -29 849 311 76 61 chr18 15754089 15755414 -70233520 - HSREP522 Satellite telomeric 0 1343 1 242 289 53 0 chr18 15755988 15756064 -70232870 - MIR3 SINE MIR -34 174 95 3003 240 102 14 chr18 15757650 15759479 -70229455 - L1MDa LINE L1 -3055 3485 1496 412 312 133 44 chr18 15759480 15760082 -70228852 + L2 LINE L2 2527 3189 -124 48 18 0 0 chr18 15760549 15760604 -70228330 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr18 15760636 15760657 -70228277 + AT_rich Low_complexity Low_complexity 1 21 0 531 250 142 12 chr18 15761433 15761673 -70227261 + L1M4 LINE L1 3887 4157 -1989 512 289 178 20 chr18 15761754 15762204 -70226730 + L1M4 LINE L1 4757 5277 -869 409 305 114 38 chr18 15762354 15762616 -70226318 + L1MEc LINE L1 1519 1800 -4596 361 302 43 82 chr18 15762659 15762891 -70226043 + L1MEc LINE L1 1914 2136 -4260 44277 39 5 3 chr18 15763683 15767622 -70221312 - L1P2 LINE L1 -375 5780 1825 2231 84 0 7 chr18 15767622 15767919 -70221015 + AluY SINE Alu 1 295 -16 44277 39 5 3 chr18 15767919 15769710 -70219224 - L1P2 LINE L1 -4330 1825 39 11221 131 17 25 chr18 15769711 15771159 -70217775 - L1PA12 LINE L1 -4813 2768 1310 1888 137 7 3 chr18 15771159 15771458 -70217476 - AluSg SINE Alu -7 303 4 11221 131 17 25 chr18 15771458 15771519 -70217415 - L1PA12 LINE L1 -6271 1310 1250 465 19 0 0 chr18 15771519 15771573 -70217361 + (CTGTG)n Simple_repeat Simple_repeat 3 56 0 11221 131 17 25 chr18 15771573 15771831 -70217103 - L1PA12 LINE L1 -6331 1250 1014 1952 207 121 16 chr18 15771864 15772294 -70216640 + L1PA12 LINE L1 848 1322 -6259 5197 171 1 4 chr18 15772296 15773121 -70215813 - L1PA12 LINE L1 -5724 1857 1035 1846 133 3 0 chr18 15773121 15773406 -70215528 + AluSx SINE Alu 1 286 -26 44000 31 22 1 chr18 15773544 15779417 -70209517 - L1PA2 LINE L1 -154 6001 1 232 352 0 45 chr18 15780502 15780590 -70208344 - MIR3 SINE MIR -6 202 119 1949 99 10 24 chr18 15780646 15780977 -70207957 - AluSc SINE Alu 0 327 1 936 300 139 10 chr18 15781382 15781966 -70206968 - L1ME3A LINE L1 -13 6157 5499 916 146 0 0 chr18 15782193 15782330 -70206604 + AluSx SINE Alu 1 137 -175 180 0 0 0 chr18 15782783 15782803 -70206131 + (T)n Simple_repeat Simple_repeat 1 20 0 976 158 12 6 chr18 15783032 15783203 -70205731 + AluSx SINE Alu 121 292 -20 311 366 64 12 chr18 15783418 15783590 -70205344 + L1ME LINE L1 5543 5723 -439 236 268 18 0 chr18 15785009 15785065 -70203869 + (TCCA)n Simple_repeat Simple_repeat 4 60 0 180 370 37 0 chr18 15786864 15786945 -70201989 - MIR3 SINE MIR -9 199 116 1265 20 0 0 chr18 15787546 15787692 -70201242 + L1PA2 LINE L1 6007 6152 -3 1385 239 52 42 chr18 15787705 15788033 -70200901 - L1ME1 LINE L1 -137 6029 5693 5810 182 39 9 chr18 15788033 15789229 -70199705 + Tigger3b DNA MER2_type 1 1231 0 1385 239 52 42 chr18 15789229 15789402 -70199532 - L1ME1 LINE L1 -473 5693 5523 22 35 0 0 chr18 15789519 15789548 -70199386 + AT_rich Low_complexity Low_complexity 1 29 0 651 231 59 27 chr18 15790308 15790529 -70198405 - L1MB4 LINE L1 -1 6179 5952 2497 213 44 59 chr18 15792870 15793388 -70195546 - L1MB4 LINE L1 -192 5988 5464 2096 92 0 11 chr18 15793388 15793691 -70195243 + AluY SINE Alu 1 300 0 2093 109 0 0 chr18 15793700 15793993 -70194941 + AluSg SINE Alu 1 293 -17 2497 213 44 59 chr18 15793993 15794491 -70194443 - L1MB4 LINE L1 -724 5456 4981 372 297 17 138 chr18 15795072 15795479 -70193455 - L2 LINE L2 0 3272 2915 241 308 216 46 chr18 15795589 15796683 -70192251 - L2 LINE L2 -543 2771 1492 361 281 77 48 chr18 15797264 15797480 -70191454 + MIR SINE MIR 3 223 -39 2026 37 24 0 chr18 15797992 15798238 -70190696 - L1PA4 LINE L1 0 6155 5904 387 287 77 34 chr18 15798396 15798605 -70190329 + L1M4 LINE L1 3751 3968 -2178 252 230 40 30 chr18 15798727 15798827 -70190107 - L1MB7 LINE L1 -34 6150 6050 34437 35 2 5 chr18 15798835 15804838 -70184096 + L1PA3 LINE L1 1 5978 -177 391 294 9 9 chr18 15806217 15806326 -70182608 + MIR SINE MIR 6 114 -148 21 0 0 0 chr18 15806712 15806733 -70182201 + AT_rich Low_complexity Low_complexity 1 21 0 200 286 0 0 chr18 15807266 15807322 -70181612 - MIR3 SINE MIR 0 208 153 440 287 97 39 chr18 15807620 15807683 -70181251 + L1ME LINE L1 5410 5468 -653 1387 162 8 17 chr18 15807683 15807918 -70181016 + MER46A DNA MER2_type 1 233 -3 440 287 97 39 chr18 15807918 15808244 -70180690 + L1ME LINE L1 5468 5822 -299 2460 62 0 10 chr18 15808735 15809041 -70179893 - AluY SINE Alu -8 303 1 333 308 40 16 chr18 15809585 15809832 -70179102 - L1M4 LINE L1 -2641 3505 3253 1673 158 0 28 chr18 15809995 15810279 -70178655 - AluSx SINE Alu -2 310 35 795 274 142 12 chr18 15810451 15810853 -70178081 - L1MB7 LINE L1 -2100 5708 5255 206 0 69 0 chr18 15810876 15810905 -70178029 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 31 44 0 0 chr18 15810953 15810998 -70177936 + AT_rich Low_complexity Low_complexity 1 45 0 207 0 0 0 chr18 15811778 15811801 -70177133 + (TG)n Simple_repeat Simple_repeat 2 24 0 326 226 91 58 chr18 15812600 15812811 -70176123 + L1ME LINE L1 5568 5794 -327 259 325 65 35 chr18 15814224 15814277 -70174657 - MIR3 SINE MIR -3 205 155 2258 79 0 4 chr18 15814277 15814581 -70174353 + AluSc SINE Alu 1 303 0 259 325 65 35 chr18 15814581 15814695 -70174239 - MIR3 SINE MIR -53 155 32 291 155 47 14 chr18 15816527 15816675 -70172259 + (TA)n Simple_repeat Simple_repeat 1 153 0 282 244 26 13 chr18 15816707 15816785 -70172149 - MER103 DNA DNA -65 101 23 331 284 37 28 chr18 15819058 15819167 -70169767 - HAL1 LINE L1 -1600 907 798 2290 70 6 35 chr18 15819927 15820243 -70168691 - AluY SINE Alu -4 307 1 23 0 0 0 chr18 15820505 15820528 -70168406 + AT_rich Low_complexity Low_complexity 1 23 0 292 268 103 0 chr18 15821006 15821103 -70167831 + MER117 DNA MER1_type 46 152 -45 23 0 0 0 chr18 15822694 15822717 -70166217 + AT_rich Low_complexity Low_complexity 1 23 0 9224 191 69 9 chr18 15822805 15828025 -70160909 - L1MA2 LINE L1 0 7723 2035 * 40261 75 12 4 chr18 15828019 15834116 -70154818 - L1PA6 LINE L1 -2 6152 3 9001 202 41 14 chr18 15834128 15835851 -70153083 - L1PA13 LINE L1 -3756 3041 1216 186 43 0 0 chr18 15835851 15835874 -70153060 + (CAG)n Simple_repeat Simple_repeat 1 23 0 9001 202 41 14 chr18 15835874 15836551 -70152383 - L1PA13 LINE L1 -5581 1216 559 2241 121 0 0 chr18 15836785 15837082 -70151852 + AluSx SINE Alu 1 297 -15 1225 216 96 34 chr18 15838264 15838588 -70150346 - MER2 DNA MER2_type 0 344 1 599 62 12 0 chr18 15839713 15839793 -70149141 + L1MA5 LINE L1 6218 6298 -2 203 0 0 36 chr18 15841123 15841151 -70147783 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2114 107 4 0 chr18 15841155 15841436 -70147498 - AluSq SINE Alu -31 282 1 261 265 69 111 chr18 15841809 15841998 -70146936 + MIR SINE MIR 57 237 -25 287 143 0 18 chr18 15842269 15842325 -70146609 + (TTTTC)n Simple_repeat Simple_repeat 5 59 0 2215 124 0 0 chr18 15842335 15842641 -70146293 - AluSx SINE Alu -6 306 1 5058 203 53 44 chr18 15842874 15844221 -70144713 - L1 LINE L1 -2002 4144 2785 566 249 73 47 chr18 15844352 15844694 -70144240 + HSREP522 Satellite telomeric 2 352 -152 199 150 0 62 chr18 15845560 15845640 -70143294 + (CCCTG)n Simple_repeat Simple_repeat 2 76 0 206 204 0 97 chr18 15845706 15845902 -70143032 + (GCCTG)n Simple_repeat Simple_repeat 2 178 0 * 374 198 6 68 chr18 15845790 15845967 -70142967 + (CCCTG)n Simple_repeat Simple_repeat 1 166 0 317 304 41 0 chr18 15846051 15846222 -70142712 + (CCCTAG)n Simple_repeat Simple_repeat 2 179 0 235 203 25 0 chr18 15846458 15846537 -70142397 + (CCCTAG)n Simple_repeat Simple_repeat 2 82 0 216 157 0 59 chr18 15846576 15846678 -70142256 + (CCCTG)n Simple_repeat Simple_repeat 1 96 0 499 253 47 0 chr18 15846841 15847011 -70141923 + (CCCTAG)n Simple_repeat Simple_repeat 1 178 0 280 293 42 18 chr18 15847024 15847191 -70141743 + (CCCTAG)n Simple_repeat Simple_repeat 2 172 0 292 196 0 81 chr18 15847289 15847437 -70141497 + (CCCTG)n Simple_repeat Simple_repeat 1 136 0 184 138 0 35 chr18 15847461 15847519 -70141415 + (CCCTG)n Simple_repeat Simple_repeat 1 56 0 233 224 0 68 chr18 15847607 15847754 -70141180 + (GCCTG)n Simple_repeat Simple_repeat 3 139 0 198 143 0 71 chr18 15847766 15847864 -70141070 + (CCCTG)n Simple_repeat Simple_repeat 2 92 0 269 170 0 89 chr18 15848042 15848154 -70140780 + (CCCTG)n Simple_repeat Simple_repeat 1 102 0 * 423 243 53 0 chr18 15848071 15848223 -70140711 + (CCCTAG)n Simple_repeat Simple_repeat 1 160 0 391 274 42 0 chr18 15848234 15848402 -70140532 + (CCCTAG)n Simple_repeat Simple_repeat 6 180 0 * 474 165 0 82 chr18 15848300 15848494 -70140440 + (CCCTG)n Simple_repeat Simple_repeat 3 180 0 405 267 43 6 chr18 15848457 15848618 -70140316 + (CCCTAG)n Simple_repeat Simple_repeat 6 172 0 * 27 29 0 0 chr18 15848633 15848667 -70140267 + AT_rich Low_complexity Low_complexity 1 34 0 395 247 23 92 chr18 15848731 15848905 -70140029 - MIR SINE MIR 0 262 101 950 103 0 15 chr18 15848908 15849044 -70139890 + AluSq/x SINE Alu 1 134 -178 1265 293 21 21 chr18 15849050 15849705 -70139229 - L1P LINE L1 -855 5291 4618 564 266 43 77 chr18 15849711 15849844 -70139090 - L1MA6 LINE L1 -12 6288 6152 2436 94 3 0 chr18 15849844 15850152 -70138782 + AluSg SINE Alu 1 309 -1 564 266 43 77 chr18 15850152 15850345 -70138589 - L1MA6 LINE L1 -148 6152 5973 181 146 42 0 chr18 15852123 15852171 -70136763 + (CTAGGG)n Simple_repeat Simple_repeat 2 51 0 250 138 0 46 chr18 15852207 15852272 -70136662 + (CAGGG)n Simple_repeat Simple_repeat 1 62 0 2252 56 0 4 chr18 15852355 15852625 -70136309 - AluY SINE Alu -14 297 29 11546 198 67 39 chr18 15852725 15856044 -70132890 + L1PA12 LINE L1 2144 5688 -1896 433 188 0 0 chr18 15856044 15856113 -70132821 + AluS SINE Alu 227 295 -16 11546 198 67 39 chr18 15856113 15856513 -70132421 + L1PA12 LINE L1 5688 6075 -1509 2177 141 0 3 chr18 15856514 15856827 -70132107 + AluSx SINE Alu 1 312 0 5672 204 50 13 chr18 15858002 15859313 -70129621 + L1 LINE L1 2785 4144 -2002 1599 211 43 28 chr18 15859325 15859707 -70129227 - HSREP522 Satellite telomeric -158 387 1 917 250 79 75 chr18 15860420 15861077 -70127857 + HSREP522 Satellite telomeric 1 659 -99 6364 104 12 27 chr18 15861304 15862548 -70126386 + L1PA14 LINE L1 4924 6160 -1 1302 214 88 76 chr18 15863310 15863731 -70125203 + MSTB LTR MaLR 1 426 0 577 288 72 8 chr18 15863870 15864106 -70124828 - MER112 DNA MER1_type -3 253 3 186 128 0 0 chr18 15864344 15864383 -70124551 + (TC)n Simple_repeat Simple_repeat 1 39 0 537 184 204 0 chr18 15864384 15864487 -70124447 - FLAM_C SINE Alu -18 125 2 558 260 59 33 chr18 15864634 15864826 -70124108 - L1MC3 LINE L1 -20 6146 5962 1942 126 11 4 chr18 15865025 15865302 -70123632 - AluSx SINE Alu -33 279 1 905 218 0 6 chr18 15865302 15865481 -70123453 - MER46B DNA MER2_type -181 55 3 339 65 0 0 chr18 15866033 15866079 -70122855 + (TG)n Simple_repeat Simple_repeat 2 47 0 1842 232 75 87 chr18 15866258 15867134 -70121800 - L1M4 LINE L1 -1440 4706 3841 27 0 0 0 chr18 15867153 15867180 -70121754 + AT_rich Low_complexity Low_complexity 1 27 0 3883 184 75 8 chr18 15867260 15868122 -70120812 - L1MB4 LINE L1 -7 6173 5254 1177 23 8 0 chr18 15868729 15868862 -70120072 - L1PA5 LINE L1 -1 6153 6020 400 175 0 60 chr18 15869718 15869901 -70119033 + (TG)n Simple_repeat Simple_repeat 1 172 0 212 338 149 22 chr18 15871094 15871370 -70117564 + L2 LINE L2 1722 2067 -1247 2117 106 0 3 chr18 15871370 15871680 -70117254 - AluSq SINE Alu 0 309 1 212 338 149 22 chr18 15871680 15871805 -70117129 + L2 LINE L2 2067 2175 -1139 315 264 113 54 chr18 15872011 15872390 -70116544 + HSREP522 Satellite telomeric 1 401 -96 1686 85 69 41 chr18 15872977 15873223 -70115711 - AluSx SINE Alu -13 299 47 360 303 97 6 chr18 15875268 15875443 -70113491 + Charlie8 DNA MER1_type 84 274 -2143 467 252 101 27 chr18 15876397 15876611 -70112323 + MIR SINE MIR 7 231 -31 679 162 9 0 chr18 15877921 15878026 -70110908 + U6 snRNA snRNA 1 106 -1 182 336 80 8 chr18 15878720 15878845 -70110089 - MIR SINE MIR -47 215 82 2059 187 39 42 chr18 15879565 15879999 -70108935 - Tigger2a DNA MER2_type 0 434 2 23 0 0 0 chr18 15880356 15880379 -70108555 + AT_rich Low_complexity Low_complexity 1 23 0 22 80 0 0 chr18 15882821 15882871 -70106063 + AT_rich Low_complexity Low_complexity 1 50 0 721 181 16 0 chr18 15884913 15885040 -70103894 - THE1-int LTR MaLR -424 1156 1028 30 0 0 0 chr18 15886616 15886646 -70102288 + AT_rich Low_complexity Low_complexity 1 30 0 425 287 108 27 chr18 15887062 15887320 -70101614 + L1ME LINE L1 5381 5659 -462 2020 137 63 33 chr18 15887690 15888054 -70100880 - THE1C LTR MaLR 0 375 1 5417 148 22 14 chr18 15888054 15888952 -70099982 - THE1C-int LTR MaLR 0 1580 676 479 228 181 0 chr18 15889235 15889362 -70099572 - MER58B DNA MER1_type 0 341 192 261 0 0 0 chr18 15889444 15889473 -70099461 + (A)n Simple_repeat Simple_repeat 1 29 0 843 326 30 9 chr18 15889638 15890064 -70098870 - L1 LINE L1 -1489 4657 4223 277 270 22 11 chr18 15891156 15891245 -70097689 + MIR SINE MIR 23 112 -150 355 301 64 29 chr18 15891274 15891447 -70097487 - MIR SINE MIR -53 209 31 2111 110 27 0 chr18 15896165 15896464 -70092470 + AluSx SINE Alu 1 307 -5 618 330 35 15 chr18 15897619 15897880 -70091054 + L2 LINE L2 1777 2042 -1272 353 185 49 0 chr18 15897882 15897963 -70090971 - L1P LINE L1 -3049 3097 3013 * 3213 172 35 44 chr18 15897962 15898009 -70090925 + L1PA13 LINE L1 3803 3849 -2297 2220 93 14 7 chr18 15898009 15898300 -70090634 + AluSc SINE Alu 1 293 -16 3213 172 35 44 chr18 15898300 15898937 -70089997 + L1PA13 LINE L1 3849 4481 -1665 1405 123 0 0 chr18 15898939 15899126 -70089808 + AluSq SINE Alu 75 261 -52 5403 121 41 22 chr18 15899253 15900024 -70088910 + L1PA13 LINE L1 4549 5304 -859 1841 145 27 0 chr18 15900024 15900320 -70088614 - AluSx SINE Alu -8 304 1 5403 121 41 22 chr18 15900320 15900471 -70088463 + L1PA13 LINE L1 5304 5451 -712 2176 117 3 0 chr18 15900471 15900770 -70088164 + AluSg SINE Alu 1 300 -10 5403 121 41 22 chr18 15900770 15901420 -70087514 + L1PA13 LINE L1 5451 6148 -15 732 274 36 14 chr18 15901544 15901763 -70087171 + MIR SINE MIR 6 229 -33 332 339 45 28 chr18 15902904 15903081 -70085853 + L2 LINE L2 2563 2742 -572 620 208 34 13 chr18 15903206 15903355 -70085579 - L1MA10 LINE L1 -11 6323 6172 373 225 192 22 chr18 15903352 15903534 -70085400 - L1ME LINE L1 -560 5675 5463 * 1016 131 156 0 chr18 15903540 15903739 -70085195 + Tigger4(Zombi) DNA MER2_type 2502 2731 0 997 225 81 81 chr18 15903739 15904258 -70084676 - L1ME LINE L1 -1365 4850 4332 372 285 55 10 chr18 15904377 15904505 -70084429 - MER58 DNA MER1_type -66 275 10 1339 358 121 7 chr18 15904534 15905476 -70083458 - L1ME LINE L1 -1939 4276 3228 1545 194 78 3 chr18 15905487 15905806 -70083128 - MLT1A1 LTR MaLR -22 343 1 1432 263 54 17 chr18 15905813 15905852 -70083082 - L1MEc LINE L1 -3016 3199 3163 204 67 0 0 chr18 15905852 15905882 -70083052 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1432 263 54 17 chr18 15905882 15907026 -70081908 - L1MEc LINE L1 -3052 3163 1958 1173 286 95 39 chr18 15907319 15907984 -70080950 - L1MEc LINE L1 -5655 741 40 256 363 85 64 chr18 15907986 15908328 -70080606 + L2 LINE L2 2924 3272 0 372 281 146 30 chr18 15908810 15909112 -70079822 - L1ME4a LINE L1 -278 5843 5507 1730 156 6 31 chr18 15909142 15909462 -70079472 - AluSx SINE Alu 0 312 1 22 35 0 0 chr18 15909882 15909911 -70079023 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr18 15910446 15910484 -70078450 + AT_rich Low_complexity Low_complexity 1 38 0 185 180 0 148 chr18 15910974 15911035 -70077899 + MIR SINE MIR 175 226 -36 316 320 52 0 chr18 15913323 15913476 -70075458 - L2 LINE L2 -432 2882 2722 23 33 0 0 chr18 15913791 15913821 -70075113 + AT_rich Low_complexity Low_complexity 1 30 0 27 49 0 0 chr18 15914118 15914159 -70074775 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr18 15914184 15914206 -70074728 + AT_rich Low_complexity Low_complexity 1 22 0 2012 110 0 23 chr18 15914891 15915192 -70073742 + AluSx SINE Alu 1 294 -18 829 216 23 6 chr18 15915403 15915579 -70073355 - MER58A DNA MER1_type -7 217 39 2446 65 0 3 chr18 15915579 15915885 -70073049 + AluY SINE Alu 1 305 -6 21 36 0 0 chr18 15915904 15915932 -70073002 + AT_rich Low_complexity Low_complexity 1 28 0 370 288 93 14 chr18 15916190 15916329 -70072605 + MIR SINE MIR 110 259 -3 2371 46 0 0 chr18 15916396 15916708 -70072226 - AluY SINE Alu 0 312 1 308 191 206 8 chr18 15968237 15968363 -70020571 - L1ME3A LINE L1 -53 6117 5967 1457 161 55 20 chr18 15968375 15968630 -70020304 - AluJo SINE Alu -16 296 33 946 128 39 19 chr18 15968630 15968786 -70020148 - AluSg/x SINE Alu -9 301 143 2331 99 0 0 chr18 15968794 15969087 -70019847 - AluSg SINE Alu -17 293 1 214 367 13 0 chr18 15969341 15969420 -70019514 - L2 LINE L2 0 3272 3193 245 350 110 5 chr18 15970699 15970899 -70018035 + MIR SINE MIR 2 222 -40 257 216 0 0 chr18 15971214 15971265 -70017669 + MER3 DNA MER1_type 40 90 -119 * 792 193 14 90 chr18 15971226 15971288 -70017646 - MER3 DNA MER1_type -4 205 140 2084 84 46 32 chr18 15971288 15971572 -70017362 + AluSq SINE Alu 7 294 -19 792 193 14 90 chr18 15971572 15971721 -70017213 - MER3 DNA MER1_type -69 140 10 2157 85 0 50 chr18 15971769 15972088 -70016846 + AluY SINE Alu 1 303 -8 2115 142 0 0 chr18 15972092 15972387 -70016547 + AluJb SINE Alu 1 295 -17 2160 131 3 16 chr18 15972389 15972702 -70016232 + AluSc SINE Alu 1 309 0 2610 68 0 0 chr18 15972707 15973016 -70015918 + AluY SINE Alu 1 309 -2 2038 54 0 35 chr18 15973431 15973690 -70015244 - AluY SINE Alu -10 301 52 2108 125 0 7 chr18 15973941 15974228 -70014706 + AluSx SINE Alu 23 307 -5 2359 82 10 3 chr18 15975407 15975700 -70013234 - AluSq SINE Alu -18 295 1 285 29 0 0 chr18 15977227 15977261 -70011673 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 2016 143 0 10 chr18 15977261 15977561 -70011373 + AluSx SINE Alu 1 297 -15 21 57 0 0 chr18 15977955 15977990 -70010944 + AT_rich Low_complexity Low_complexity 1 35 0 478 298 0 0 chr18 15978237 15978351 -70010583 - MIR SINE MIR -1 261 148 431 217 62 1 chr18 15978586 15978691 -70010243 - MIR SINE MIR -97 111 2 238 305 21 21 chr18 15978718 15978813 -70010121 - MIR SINE MIR -2 260 166 1564 147 96 7 chr18 15978899 15979171 -70009763 + AluSx SINE Alu 1 296 -16 2246 109 0 3 chr18 15979171 15979474 -70009460 + AluSg1 SINE Alu 1 302 -7 650 224 73 18 chr18 15979774 15979939 -70008995 + MER5A DNA MER1_type 14 187 -2 508 192 15 15 chr18 15980292 15980422 -70008512 - MER20B DNA MER1_type -111 672 543 301 352 66 19 chr18 15980542 15980755 -70008179 - L1ME LINE L1 -378 5743 5521 604 310 81 66 chr18 15981940 15982437 -70006497 - L1ME3A LINE L1 -215 5947 5444 1715 170 27 14 chr18 15982480 15982774 -70006160 - AluJo SINE Alu -14 298 1 1011 184 50 18 chr18 15983250 15983468 -70005466 + L1M4c LINE L1 3 227 -6157 276 299 28 2 chr18 15983555 15983636 -70005298 - MIR SINE MIR -46 162 80 2505 65 0 7 chr18 15983673 15983979 -70004955 - AluY SINE Alu -7 304 1 644 206 29 18 chr18 15983983 15984153 -70004781 + MER104 DNA Tc2 9 180 0 288 284 72 98 chr18 15985346 15985540 -70003394 - MIR SINE MIR -24 238 50 1740 178 19 10 chr18 15985573 15985690 -70003244 + AluJo SINE Alu 1 115 -197 2536 74 6 0 chr18 15985690 15986001 -70002933 + AluSp SINE Alu 1 313 0 1740 178 19 10 chr18 15986001 15986192 -70002742 + AluJo SINE Alu 115 312 0 468 171 0 0 chr18 15986360 15986436 -70002498 - AluSg/x SINE Alu -18 294 219 2090 97 0 4 chr18 15986436 15986703 -70002231 - AluSx SINE Alu -44 268 3 1956 105 72 0 chr18 15987253 15987529 -70001405 + AluSx SINE Alu 1 296 -16 2566 18 0 0 chr18 15987578 15987898 -70001036 + AluY SINE Alu 1 320 0 1927 193 88 47 chr18 15987898 15988407 -70000527 - MER67C LTR ERV1 -107 603 74 279 290 77 34 chr18 15988740 15988877 -70000057 - MIR SINE MIR -60 148 30 204 330 66 0 chr18 15988970 15989061 -69999873 - MIR SINE MIR -163 99 3 * 251 369 30 54 chr18 15989061 15989174 -69999760 + MIR SINE MIR 82 190 -72 922 84 42 12 chr18 15989268 15989434 -69999500 + CT-rich Low_complexity Low_complexity 4 174 0 200 167 0 0 chr18 15989434 15989464 -69999470 + polypyrimidine Low_complexity Low_complexity 4 33 0 1548 188 84 0 chr18 15989468 15989755 -69999179 - AluJb SINE Alu -1 311 1 243 268 57 49 chr18 15989765 15989888 -69999046 - L3b LINE CR1 -115 1468 1345 610 250 108 17 chr18 15989948 15990124 -69998810 - MIR SINE MIR -62 200 9 2288 119 0 3 chr18 15990307 15990618 -69998316 - AluSx SINE Alu -2 310 1 1545 208 10 13 chr18 15990775 15991083 -69997851 - AluJo SINE Alu -5 307 1 189 0 0 0 chr18 15991801 15991822 -69997112 + (T)n Simple_repeat Simple_repeat 1 21 0 982 191 59 80 chr18 15992660 15992768 -69996166 + AluJo SINE Alu 14 123 -189 1374 168 70 37 chr18 15992768 15992944 -69995990 - AluJb SINE Alu -4 308 116 2109 74 52 0 chr18 15992944 15993215 -69995719 + AluY SINE Alu 1 285 -26 1374 168 70 37 chr18 15993215 15993336 -69995598 - AluJb SINE Alu -196 116 1 982 191 59 80 chr18 15993336 15993515 -69995419 + AluJo SINE Alu 123 295 -17 2378 99 0 0 chr18 15993764 15994068 -69994866 - AluSx SINE Alu -8 304 1 22 0 0 0 chr18 15994082 15994104 -69994830 + AT_rich Low_complexity Low_complexity 1 22 0 1076 236 58 17 chr18 15994434 15994781 -69994153 - L1MB8 LINE L1 0 6178 5818 2165 80 70 0 chr18 15995291 15995577 -69993357 - AluY SINE Alu -5 306 1 2239 114 0 0 chr18 15995577 15995875 -69993059 - AluSx SINE Alu -14 298 1 238 240 140 0 chr18 15995959 15996059 -69992875 - L1MB8 LINE L1 -2017 5791 5678 1713 214 119 8 chr18 15996085 15996571 -69992363 - Charlie1a DNA MER1_type 0 1455 916 1162 132 11 26 chr18 15996587 15996776 -69992158 + AluJo SINE Alu 43 228 -84 228 262 16 0 chr18 15996815 15996876 -69992058 - Charlie1a DNA MER1_type -562 893 832 1588 244 31 70 chr18 15996904 15996967 -69991967 - Charlie1a DNA MER1_type -2063 698 634 2326 115 0 0 chr18 15996967 15997271 -69991663 - AluSx SINE Alu -8 304 1 1588 244 31 70 chr18 15997271 15997823 -69991111 - Charlie1a DNA MER1_type -2127 634 107 2053 119 0 18 chr18 15997831 15998116 -69990818 + AluSx SINE Alu 1 280 -32 1728 195 7 3 chr18 15998315 15998617 -69990317 - AluJo SINE Alu -9 303 1 2278 106 10 6 chr18 15998633 15998944 -69989990 - AluSx SINE Alu 0 312 1 396 262 43 24 chr18 15998976 15999140 -69989794 - L1MC5 LINE L1 -51 7910 7744 1595 169 6 42 chr18 15999667 16000003 -69988931 - AluJo SINE Alu 0 312 3 2464 93 0 0 chr18 16000022 16000332 -69988602 - AluY SINE Alu -1 310 1 2275 121 3 0 chr18 16000554 16000861 -69988073 - AluSq SINE Alu -5 308 1 191 286 100 14 chr18 16001374 16001444 -69987490 + MIR SINE MIR 25 100 -108 491 307 64 32 chr18 16001540 16001885 -69987049 + L1ME4a LINE L1 5608 5963 -158 1317 153 6 138 chr18 16002294 16002429 -69986505 + AluJo SINE Alu 1 152 -160 2272 93 0 13 chr18 16002429 16002730 -69986204 + AluSg SINE Alu 1 297 -13 2360 96 0 0 chr18 16002733 16003024 -69985910 + AluSx SINE Alu 1 291 -21 1317 153 6 138 chr18 16003024 16003044 -69985890 + AluJo SINE Alu 154 175 -137 2131 68 43 7 chr18 16003044 16003325 -69985609 + AluY SINE Alu 1 291 -20 1317 153 6 138 chr18 16003325 16003337 -69985597 + AluJo SINE Alu 175 295 -17 857 108 6 102 chr18 16003337 16003504 -69985430 + AluJb SINE Alu 145 295 -17 279 51 0 0 chr18 16003987 16004026 -69984908 - Alu SINE Alu -13 289 251 334 205 39 13 chr18 16004027 16004105 -69984829 + L1MEc LINE L1 137 216 -6180 1274 233 97 38 chr18 16004148 16004262 -69984672 + L1MEc LINE L1 2364 2470 -3745 1786 166 17 3 chr18 16004262 16004551 -69984383 - AluJo SINE Alu -19 293 1 342 0 0 0 chr18 16004557 16004595 -69984339 + (TTA)n Simple_repeat Simple_repeat 3 40 0 1274 233 97 38 chr18 16004595 16004979 -69983955 + L1MEc LINE L1 2474 2899 -3316 428 196 21 0 chr18 16004981 16005078 -69983856 + FLAM_A SINE Alu 43 141 -1 250 189 63 9 chr18 16005080 16005191 -69983743 + L1MEc LINE L1 3176 3292 -2923 645 101 0 30 chr18 16005229 16005328 -69983606 + AluS SINE Alu 2 97 -216 353 206 11 0 chr18 16005332 16005424 -69983510 + GA-rich Low_complexity Low_complexity 2 94 0 925 75 17 0 chr18 16005424 16005544 -69983390 + AluSg SINE Alu 1 122 -188 807 270 4 4 chr18 16005671 16005919 -69983015 + L1MB8 LINE L1 2362 2609 -3537 228 35 0 0 chr18 16005920 16005949 -69982985 + (TG)n Simple_repeat Simple_repeat 2 30 0 2543 78 3 0 chr18 16005954 16006263 -69982671 - AluSp SINE Alu -3 310 1 1013 188 0 0 chr18 16006271 16006425 -69982509 - AluJb SINE Alu -25 287 134 1904 167 0 0 chr18 16006434 16006727 -69982207 + AluSq SINE Alu 13 305 -8 2312 211 22 10 chr18 16006727 16007319 -69981615 + L1MB8 LINE L1 2622 3223 -2923 2181 122 0 0 chr18 16007319 16007607 -69981327 + AluSg SINE Alu 1 288 -22 746 223 0 0 chr18 16007616 16007755 -69981179 - FRAM SINE Alu -38 138 1 296 233 42 25 chr18 16007756 16007871 -69981063 - L1 LINE L1 -2806 3340 3223 2365 94 0 3 chr18 16007871 16008170 -69980764 + AluY SINE Alu 1 298 -13 820 103 0 26 chr18 16008180 16008297 -69980637 - AluSg/x SINE Alu -9 303 190 2087 110 3 14 chr18 16008297 16008579 -69980355 + AluSg SINE Alu 13 291 -19 539 185 19 0 chr18 16008579 16008687 -69980247 + L1MB8 LINE L1 4484 4593 -1553 402 151 0 0 chr18 16008725 16008798 -69980136 + CT-rich Low_complexity Low_complexity 3 75 0 1091 217 99 31 chr18 16008799 16009144 -69979790 + L1MB8 LINE L1 4613 4994 -1152 1662 215 3 3 chr18 16009144 16009446 -69979488 - AluJo SINE Alu -10 302 1 1091 217 99 31 chr18 16009446 16009524 -69979410 + L1MB8 LINE L1 4994 5065 -1081 2069 159 0 0 chr18 16009544 16009834 -69979100 + AluSx SINE Alu 1 290 -22 * 2227 47 65 4 chr18 16009833 16010108 -69978826 + AluY SINE Alu 19 310 -1 1186 196 66 28 chr18 16010116 16010433 -69978501 + L1MB8 LINE L1 5844 6172 -6 2406 157 89 98 chr18 16010438 16011121 -69977813 + L1MB7 LINE L1 5321 5997 -187 679 158 30 15 chr18 16011448 16011581 -69977353 + AluJo SINE Alu 2 136 -176 2285 115 0 3 chr18 16011581 16011886 -69977048 + AluSx SINE Alu 1 304 -8 1746 149 3 55 chr18 16011888 16012031 -69976903 + AluSg1 SINE Alu 2 122 -187 2600 65 0 0 chr18 16012031 16012337 -69976597 + AluY SINE Alu 1 306 -5 1746 149 3 55 chr18 16012337 16012501 -69976433 + AluSg1 SINE Alu 122 293 -16 2348 100 0 10 chr18 16012610 16012921 -69976013 - AluY SINE Alu -1 310 3 2007 101 45 3 chr18 16012923 16013209 -69975725 - AluSx SINE Alu -14 298 1 2028 159 0 3 chr18 16013297 16013605 -69975329 + AluSx SINE Alu 1 307 -5 1819 167 39 0 chr18 16013810 16014091 -69974843 - AluJo SINE Alu -20 292 1 2067 89 64 4 chr18 16014976 16015257 -69973677 - AluSq SINE Alu -15 298 1 1283 190 3 100 chr18 16015329 16015517 -69973417 - AluJo SINE Alu -12 290 144 2252 101 0 14 chr18 16015517 16015814 -69973120 + AluSc SINE Alu 1 293 -16 1283 190 3 100 chr18 16015814 16015946 -69972988 - AluJo SINE Alu -158 144 1 282 350 34 0 chr18 16016618 16016735 -69972199 - L2 LINE L2 -1 3271 3151 331 354 8 8 chr18 16016746 16016873 -69972061 - MER5A DNA MER1_type -6 183 57 356 324 159 6 chr18 16017183 16017365 -69971569 - MIR SINE MIR -41 221 12 234 0 0 0 chr18 16017379 16017405 -69971529 + (T)n Simple_repeat Simple_repeat 1 26 0 288 0 0 0 chr18 16017604 16017636 -69971298 + (A)n Simple_repeat Simple_repeat 1 32 0 322 226 22 4 chr18 16017637 16017692 -69971242 + (TA)n Simple_repeat Simple_repeat 1 54 -481 1793 183 3 0 chr18 16017692 16017982 -69970952 - AluJo SINE Alu -21 291 1 322 226 22 4 chr18 16017982 16018163 -69970771 + (TA)n Simple_repeat Simple_repeat 54 535 0 305 213 66 123 chr18 16018167 16018289 -69970645 - L1MC4 LINE L1 -1339 6703 6589 828 170 9 77 chr18 16018350 16018414 -69970520 + L1M4c LINE L1 2320 2387 -3995 2043 157 0 0 chr18 16018414 16018714 -69970220 + AluJb SINE Alu 1 300 -12 828 170 9 77 chr18 16018714 16018912 -69970022 + L1M4c LINE L1 2387 2562 -3820 2239 89 24 3 chr18 16018912 16019204 -69969730 + AluY SINE Alu 1 298 -13 828 170 9 77 chr18 16019204 16019252 -69969682 + L1M4c LINE L1 2562 2612 -3770 2429 106 0 0 chr18 16019252 16019563 -69969371 + AluSx SINE Alu 1 311 -1 2219 95 7 13 chr18 16019692 16019997 -69968937 - AluSg SINE Alu -2 308 6 2248 120 3 0 chr18 16020001 16020300 -69968634 - AluSx SINE Alu -12 300 1 293 328 116 11 chr18 16020510 16020953 -69967981 - L2 LINE L2 -1005 2309 1752 2662 46 0 0 chr18 16021686 16021990 -69966944 - AluY SINE Alu -7 304 1 25 0 0 0 chr18 16021992 16022017 -69966917 + AT_rich Low_complexity Low_complexity 1 25 0 1767 190 36 22 chr18 16022994 16023297 -69965637 + MLT1A1 LTR MaLR 1 311 -54 883 79 79 0 chr18 16023297 16023424 -69965510 + MER85 DNA T2_type 3 139 0 1767 190 36 22 chr18 16023424 16023478 -69965456 + MLT1A1 LTR MaLR 311 363 -2 422 157 12 0 chr18 16023513 16023596 -69965338 + CT-rich Low_complexity Low_complexity 3 86 0 2085 153 0 3 chr18 16023616 16023929 -69965005 - AluSx SINE Alu 0 312 1 2331 102 3 0 chr18 16024295 16024588 -69964346 + AluSx SINE Alu 1 294 -18 226 297 58 45 chr18 16024617 16024772 -69964162 - L2 LINE L2 -2600 714 558 364 298 29 18 chr18 16024923 16025094 -69963840 + MER5B DNA MER1_type 4 176 -2 320 167 17 0 chr18 16025143 16025203 -69963731 + U7 snRNA snRNA 1 61 -2 1704 125 52 37 chr18 16025277 16025549 -69963385 + AluJo SINE Alu 7 282 -30 2486 81 0 7 chr18 16025549 16025856 -69963078 - AluSx SINE Alu -7 305 1 2270 87 40 0 chr18 16025883 16026181 -69962753 + AluSg SINE Alu 1 310 0 396 274 64 13 chr18 16026845 16027002 -69961932 - MER5A DNA MER1_type -4 185 21 633 169 0 77 chr18 16027187 16027317 -69961617 + AluJo SINE Alu 6 125 -187 339 179 0 0 chr18 16027317 16027384 -69961550 + GA-rich Low_complexity Low_complexity 3 69 0 874 156 0 72 chr18 16027400 16027580 -69961354 + AluJo SINE Alu 129 295 -17 2274 76 40 23 chr18 16027773 16028074 -69960860 + AluSq SINE Alu 1 306 -7 2055 93 4 0 chr18 16028222 16028480 -69960454 - AluSx SINE Alu -53 259 1 22 0 0 0 chr18 16028494 16028516 -69960418 + AT_rich Low_complexity Low_complexity 1 22 0 229 253 71 10 chr18 16028625 16028724 -69960210 - MER105 DNA DNA -80 124 20 1128 247 53 12 chr18 16028853 16029193 -69959741 - L1MB7 LINE L1 -13 6171 5818 2114 125 0 7 chr18 16029703 16029990 -69958944 - AluSx SINE Alu -5 307 23 1872 84 0 38 chr18 16030241 16030502 -69958432 + AluY SINE Alu 52 302 -9 2122 142 0 0 chr18 16030506 16030801 -69958133 + AluJb SINE Alu 1 295 -17 2166 131 3 16 chr18 16030803 16031116 -69957818 + AluSc SINE Alu 1 309 0 2564 58 0 0 chr18 16031121 16031415 -69957519 + AluY SINE Alu 1 294 -17 2052 153 16 0 chr18 16032263 16032570 -69956364 + AluSx SINE Alu 1 312 0 591 120 28 51 chr18 16035114 16035914 -69953020 + (TG)n Simple_repeat Simple_repeat 1 781 0 325 198 206 8 chr18 16037261 16037387 -69951547 - L1ME3A LINE L1 -53 6117 5967 1482 157 55 20 chr18 16037399 16037654 -69951280 - AluJo SINE Alu -16 296 33 988 135 39 0 chr18 16037654 16037810 -69951124 - AluSg/x SINE Alu -6 304 143 2348 102 0 0 chr18 16037817 16038112 -69950822 - AluSg SINE Alu -15 295 1 201 367 13 0 chr18 16038366 16038445 -69950489 - L2 LINE L2 0 3272 3193 216 350 110 5 chr18 16039724 16039924 -69949010 + MIR SINE MIR 2 222 -40 264 216 0 0 chr18 16040239 16040290 -69948644 + MER3 DNA MER1_type 40 90 -119 * 805 193 14 90 chr18 16040251 16040313 -69948621 - MER3 DNA MER1_type -4 205 140 2094 84 46 32 chr18 16040313 16040597 -69948337 + AluSq SINE Alu 7 294 -19 805 193 14 90 chr18 16040597 16040746 -69948188 - MER3 DNA MER1_type -69 140 10 2523 60 0 38 chr18 16040794 16041109 -69947825 + AluY SINE Alu 1 303 -8 2122 142 0 0 chr18 16041113 16041408 -69947526 + AluJb SINE Alu 1 295 -17 2166 131 3 16 chr18 16041410 16041723 -69947211 + AluSc SINE Alu 1 309 0 2564 58 0 0 chr18 16041728 16042022 -69946912 + AluY SINE Alu 1 294 -17 2052 153 16 0 chr18 16042870 16043177 -69945757 + AluSx SINE Alu 1 312 0 591 120 28 51 chr18 16045721 16046521 -69942413 + (TG)n Simple_repeat Simple_repeat 1 781 0 26 0 0 0 chr18 16046913 16046939 -69941995 + GC_rich Low_complexity Low_complexity 1 26 0 186 43 0 0 chr18 16048735 16048758 -69940176 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1162 186 59 21 chr18 16048775 16048878 -69940056 - AluJo SINE Alu -58 254 156 2514 49 3 16 chr18 16048878 16049184 -69939750 - AluY SINE Alu -9 302 1 1162 186 59 21 chr18 16049184 16049317 -69939617 - AluJo SINE Alu -156 156 9 195 320 135 19 chr18 16050440 16050596 -69938338 + MIR SINE MIR 77 250 -12 837 114 32 63 chr18 16050794 16050828 -69938106 - L1PB4 LINE L1 -5 6151 6117 2250 104 0 13 chr18 16050828 16051135 -69937799 - AluSx SINE Alu -9 303 1 837 114 32 63 chr18 16051135 16051258 -69937676 - L1PB4 LINE L1 -39 6117 5999 794 173 81 0 chr18 16051260 16051433 -69937501 - L1PB4 LINE L1 -353 5803 5617 937 192 6 0 chr18 16051613 16051780 -69937154 + FRAM SINE Alu 9 176 0 1542 148 36 68 chr18 16051780 16051974 -69936960 - L1PB4 LINE L1 -571 5585 5386 2190 129 0 0 chr18 16051974 16052277 -69936657 - AluSg SINE Alu -7 303 1 1542 148 36 68 chr18 16052277 16052307 -69936627 - L1PB4 LINE L1 -770 5386 5357 1785 175 3 13 chr18 16052307 16052621 -69936313 + AluJb SINE Alu 1 311 -1 1542 148 36 68 chr18 16052621 16052826 -69936108 - L1PB4 LINE L1 -799 5357 5166 2213 106 0 10 chr18 16052849 16053141 -69935793 - AluY SINE Alu -22 289 1 373 235 30 83 chr18 16053662 16053794 -69935140 - L2 LINE L2 -2 3311 3187 245 273 182 50 chr18 16053883 16054103 -69934831 + L3 LINE CR1 1261 1509 -68 204 225 0 0 chr18 16054921 16054961 -69933973 - L3 LINE CR1 -15 1562 1523 202 225 0 0 chr18 16054927 16054967 -69933967 - MIR3 SINE MIR -25 183 144 * 2353 92 3 0 chr18 16054970 16055276 -69933658 - AluSp SINE Alu -5 308 2 2070 128 0 3 chr18 16055779 16056068 -69932866 + AluSx SINE Alu 1 288 -24 207 0 0 0 chr18 16056071 16056094 -69932840 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1495 141 23 62 chr18 16056110 16056414 -69932520 + AluJo SINE Alu 1 292 -20 2219 56 19 75 chr18 16056424 16056746 -69932188 + AluSp SINE Alu 5 308 -5 2030 107 0 0 chr18 16057484 16057746 -69931188 - AluSx SINE Alu -50 262 1 917 142 0 8 chr18 16057782 16057916 -69931018 - FLAM_C SINE Alu 0 133 1 2006 109 39 3 chr18 16058095 16058379 -69930555 - AluSq SINE Alu -19 294 1 10990 103 67 87 chr18 16058877 16060207 -69928727 - Tigger1 DNA MER2_type -351 2067 628 984 161 0 19 chr18 16060207 16060369 -69928565 - FRAM SINE Alu -7 169 11 10990 103 67 87 chr18 16060369 16060959 -69927975 - Tigger1 DNA MER2_type -1790 628 28 1635 105 5 0 chr18 16061450 16061669 -69927265 - AluSg/x SINE Alu -2 308 89 709 92 0 0 chr18 16061677 16061764 -69927170 + AluSq SINE Alu 121 207 -106 403 241 0 0 chr18 16061758 16061837 -69927097 - FLAM_A SINE Alu -53 79 1 * 27 49 0 0 chr18 16064071 16064112 -69924822 + AT_rich Low_complexity Low_complexity 1 41 0 1859 122 68 14 chr18 16065546 16065841 -69923093 + AluSq SINE Alu 1 311 -2 240 233 0 0 chr18 16066431 16066504 -69922430 + GA-rich Low_complexity Low_complexity 3 75 0 2356 87 0 3 chr18 16068887 16069187 -69919747 - AluY SINE Alu -12 299 1 2248 108 0 0 chr18 16069248 16069536 -69919398 - AluSc SINE Alu -21 288 1 2210 117 0 7 chr18 16070392 16070691 -69918243 - AluJb SINE Alu -15 297 1 1993 134 24 0 chr18 16072294 16072584 -69916350 - AluSx SINE Alu -15 297 1 2570 68 0 0 chr18 16073284 16073595 -69915339 - AluY SINE Alu 0 311 1 2469 68 0 10 chr18 16073781 16074092 -69914842 + AluY SINE Alu 1 308 -3 2360 84 3 0 chr18 16075882 16076178 -69912756 + AluSp SINE Alu 1 297 -16 257 196 0 0 chr18 16076854 16076905 -69912029 + L1MC4 LINE L1 6653 6703 -1339 233 301 0 54 chr18 16076915 16077008 -69911926 - L1MC4 LINE L1 -1339 6703 6616 243 232 0 0 chr18 16077032 16077088 -69911846 - L1MC4 LINE L1 -1339 6703 6648 1502 192 3 21 chr18 16077091 16077382 -69911552 - AluJo SINE Alu -24 288 3 1596 190 3 21 chr18 16078363 16078653 -69910281 - AluJo SINE Alu -27 285 1 513 274 37 32 chr18 16080581 16080637 -69908297 + MIR SINE MIR 46 100 -162 1334 190 88 0 chr18 16080637 16080911 -69908023 - AluJo SINE Alu -14 298 1 513 274 37 32 chr18 16080911 16081044 -69907890 + MIR SINE MIR 100 236 -26 373 274 104 0 chr18 16081099 16081205 -69907729 + L2 LINE L2 3197 3313 0 2275 119 0 0 chr18 16081262 16081572 -69907362 + AluSg SINE Alu 1 310 0 2183 97 0 17 chr18 16081748 16082038 -69906896 - AluSg SINE Alu -25 285 1 24 0 0 0 chr18 16082140 16082164 -69906770 + AT_rich Low_complexity Low_complexity 1 24 0 1039 109 0 0 chr18 16082164 16082302 -69906632 - L1PA10 LINE L1 0 6168 6031 2285 97 7 10 chr18 16082456 16082765 -69906169 + AluSx SINE Alu 1 308 -4 2209 110 10 0 chr18 16083128 16083429 -69905505 + AluSp SINE Alu 1 304 -9 27 100 0 0 chr18 16083833 16083923 -69905011 + AT_rich Low_complexity Low_complexity 1 90 0 565 158 87 8 chr18 16084492 16084619 -69904315 + MER3 DNA MER1_type 65 201 -8 379 261 6 30 chr18 16085499 16085664 -69903270 + (TG)n Simple_repeat Simple_repeat 1 161 0 289 220 0 27 chr18 16085707 16085859 -69903075 + (TG)n Simple_repeat Simple_repeat 1 147 0 209 216 0 0 chr18 16086322 16086359 -69902575 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 2057 155 3 0 chr18 16086361 16086671 -69902263 - AluJo SINE Alu 0 312 2 307 259 6 6 chr18 16087286 16087383 -69901551 - MIR3 SINE MIR -14 194 97 409 193 117 62 chr18 16087667 16087812 -69901122 + MIR SINE MIR 110 262 0 1604 81 0 0 chr18 16088246 16088443 -69900491 + AluSq SINE Alu 1 197 -116 24 77 0 0 chr18 16088634 16088686 -69900248 + AT_rich Low_complexity Low_complexity 1 52 0 203 220 34 0 chr18 16088725 16088784 -69900150 + GA-rich Low_complexity Low_complexity 1 61 0 2215 89 7 7 chr18 16089348 16089641 -69899293 - AluSc SINE Alu -16 293 1 189 0 0 0 chr18 16089664 16089685 -69899249 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2001 119 0 60 chr18 16090138 16090456 -69898478 - AluJb SINE Alu -11 301 3 21 0 0 0 chr18 16090764 16090785 -69898149 + AT_rich Low_complexity Low_complexity 1 21 0 813 136 0 0 chr18 16091974 16092092 -69896842 + AluJb SINE Alu 1 118 -194 207 0 0 0 chr18 16092099 16092122 -69896812 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 21 36 0 0 chr18 16092135 16092163 -69896771 + AT_rich Low_complexity Low_complexity 1 28 0 2276 87 0 7 chr18 16092305 16092605 -69896329 - AluY SINE Alu -13 298 1 1097 186 93 22 chr18 16093729 16093955 -69894979 + MIR SINE MIR 5 246 -16 1263 171 73 43 chr18 16093957 16094055 -69894879 + MER44D DNA MER2_type 3 97 -2394 2115 134 0 0 chr18 16094055 16094353 -69894581 - AluSx SINE Alu -14 298 1 1263 171 73 43 chr18 16094353 16094581 -69894353 + MER44D DNA MER2_type 97 609 0 2078 93 53 30 chr18 16094590 16094892 -69894042 - AluSg SINE Alu -1 309 1 422 152 40 40 chr18 16094941 16095040 -69893894 + L1MB7 LINE L1 6077 6175 -9 2378 71 0 10 chr18 16096104 16096401 -69892533 + AluY SINE Alu 1 294 -17 304 291 101 28 chr18 16096818 16096997 -69891937 + L1ME4a LINE L1 5717 5908 -213 5221 175 168 1 chr18 16097514 16098696 -69890238 + L1 LINE L1 3478 4856 -1290 603 194 28 0 chr18 16098697 16098805 -69890129 - FRAM SINE Alu -9 167 57 255 332 100 36 chr18 16098852 16099072 -69889862 - L2 LINE L2 -25 3247 3014 357 293 8 38 chr18 16099867 16100000 -69888934 - MIR SINE MIR -70 192 64 2158 101 0 0 chr18 16100630 16100907 -69888027 - AluSx SINE Alu -35 277 1 422 262 0 0 chr18 16100910 16100994 -69887940 - FRAM/FAM SINE Alu -93 83 1 1801 159 0 26 chr18 16101095 16101403 -69887531 - AluJo SINE Alu -2 310 11 380 339 62 8 chr18 16101479 16101609 -69887325 - MIR SINE MIR -106 156 20 267 244 13 26 chr18 16101615 16101693 -69887241 + AluJ/FRAM SINE Alu 220 296 -6 2584 40 0 40 chr18 16101748 16102070 -69886864 + AluY SINE Alu 1 309 -2 876 59 25 8 chr18 16102071 16102189 -69886745 + AluY SINE Alu 103 222 -89 272 240 0 10 chr18 16102591 16102687 -69886247 + (TG)n Simple_repeat Simple_repeat 2 96 0 21 36 0 0 chr18 16102828 16102856 -69886078 + AT_rich Low_complexity Low_complexity 1 28 0 509 167 0 33 chr18 16102860 16103093 -69885841 + AluJo SINE Alu 2 286 -26 206 276 118 33 chr18 16103163 16103314 -69885620 - MIR SINE MIR -63 145 20 617 294 161 26 chr18 16104357 16104864 -69884070 + L2 LINE L2 2728 3308 -5 420 264 101 71 chr18 16105032 16105369 -69883565 - L3 LINE CR1 -66 1511 1165 3118 158 54 20 chr18 16105476 16106085 -69882849 + L1MB4 LINE L1 5550 6179 -1 262 102 102 20 chr18 16106258 16106307 -69882627 + MER5A DNA MER1_type 9 61 -128 2095 94 4 7 chr18 16106352 16106627 -69882307 - AluSg SINE Alu -8 302 29 3556 165 63 18 chr18 16106937 16107616 -69881318 + L1MB8 LINE L1 5464 6173 -5 2133 75 7 11 chr18 16108202 16108482 -69880452 - AluY SINE Alu -32 279 1 325 200 44 0 chr18 16108484 16108574 -69880360 + L1ME2 LINE L1 4977 5070 -1076 284 57 0 0 chr18 16108719 16108754 -69880180 + U2 snRNA snRNA 1 35 -153 2971 193 73 46 chr18 16108754 16109663 -69879271 + L1ME2 LINE L1 5153 6164 0 344 167 61 15 chr18 16109752 16109818 -69879116 + MLT1A2 LTR MaLR 321 374 0 402 21 0 0 chr18 16110223 16110270 -69878664 + (CA)n Simple_repeat Simple_repeat 2 48 0 1634 216 60 3 chr18 16110313 16110683 -69878251 + L1MB4 LINE L1 5783 6173 -7 261 272 120 0 chr18 16110957 16111049 -69877885 + L2 LINE L2 1954 2056 -1258 492 181 142 13 chr18 16111174 16111329 -69877605 - L2 LINE L2 -1827 1487 1313 2369 92 0 0 chr18 16111366 16111660 -69877274 - AluSx SINE Alu -18 294 1 436 151 96 0 chr18 16111806 16111879 -69877055 + AluJ/FLAM SINE Alu 3 82 -230 181 250 0 0 chr18 16112065 16112101 -69876833 + L2 LINE L2 3255 3290 -23 2127 120 7 0 chr18 16112618 16112909 -69876025 + AluSx SINE Alu 1 293 -19 497 233 0 19 chr18 16113702 16113805 -69875129 + MER5B DNA MER1_type 60 160 -18 324 252 0 156 chr18 16113823 16113958 -69874976 - L2 LINE L2 -1 3312 3199 376 245 93 22 chr18 16113979 16114118 -69874816 - MER102b DNA MER1_type -51 290 142 644 164 15 52 chr18 16114224 16114358 -69874576 + AluJo/FLAM SINE Alu 1 129 -173 2378 102 0 0 chr18 16114358 16114663 -69874271 + AluSc SINE Alu 1 305 -4 1702 184 6 16 chr18 16114678 16114993 -69873941 + AluJo SINE Alu 1 312 0 489 258 146 60 chr18 16115012 16115184 -69873750 + L1M4 LINE L1 2163 2319 -3827 2311 110 0 0 chr18 16115184 16115485 -69873449 + AluSx SINE Alu 1 301 -11 489 258 146 60 chr18 16115485 16115681 -69873253 + L1M4 LINE L1 2319 2563 -3583 713 200 8 23 chr18 16115685 16115815 -69873119 + FLAM_A SINE Alu 1 128 -5 22 0 0 30 chr18 16115815 16115828 -69873106 + AT_rich Low_complexity Low_complexity 1 13 -19 2081 80 0 83 chr18 16115828 16116140 -69872794 - AluSg SINE Alu -24 286 1 22 0 0 30 chr18 16116140 16116159 -69872775 + AT_rich Low_complexity Low_complexity 13 32 0 670 283 67 9 chr18 16116471 16116694 -69872240 + MIR SINE MIR 27 262 0 237 65 0 0 chr18 16116971 16117002 -69871932 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1915 151 0 11 chr18 16117005 16117290 -69871644 - AluJo SINE Alu -30 282 1 1965 138 11 0 chr18 16118212 16118495 -69870439 - AluSx SINE Alu -24 288 3 569 262 30 18 chr18 16119432 16119644 -69869290 - L1ME4a LINE L1 -232 5889 5673 336 271 84 24 chr18 16119641 16119807 -69869127 - L1ME LINE L1 -385 5736 5561 * 1387 159 85 15 chr18 16119815 16119942 -69868992 + AluJo SINE Alu 1 118 -194 2128 120 0 7 chr18 16119942 16120225 -69868709 + AluSx SINE Alu 1 281 -31 1387 159 85 15 chr18 16120225 16120368 -69868566 + AluJo SINE Alu 118 290 -22 1813 160 7 7 chr18 16120375 16120669 -69868265 + AluJb SINE Alu 8 301 -11 639 164 190 0 chr18 16120749 16120865 -69868069 - FLAM_C SINE Alu -4 139 2 349 316 91 16 chr18 16120875 16120952 -69867982 - MIR SINE MIR -55 207 137 2036 147 7 0 chr18 16120952 16121259 -69867675 + AluSx SINE Alu 1 309 -3 349 316 91 16 chr18 16121259 16121368 -69867566 - MIR SINE MIR -125 137 7 2070 125 6 16 chr18 16121415 16121727 -69867207 + AluSx SINE Alu 1 309 -3 2360 84 3 0 chr18 16123517 16123813 -69865121 + AluSp SINE Alu 1 297 -16 238 163 41 0 chr18 16124489 16124538 -69864396 + L1MC4 LINE L1 6653 6703 -1339 314 271 9 0 chr18 16124550 16124657 -69864277 + (TACG)n Simple_repeat Simple_repeat 4 111 0 243 232 0 0 chr18 16124659 16124715 -69864219 - L1MC4 LINE L1 -1339 6703 6648 1502 192 3 21 chr18 16124718 16125009 -69863925 - AluJo SINE Alu -24 288 3 921 209 60 19 chr18 16125291 16125559 -69863375 - L1MB7 LINE L1 -131 6053 5775 * 1110 222 22 22 chr18 16125555 16125830 -69863104 - L1MC4 LINE L1 -1115 6927 6653 1796 151 47 26 chr18 16126667 16127011 -69861923 - MER47A DNA MER2_type 0 366 16 3854 201 65 46 chr18 16127034 16127285 -69861649 + MER21B LTR ERV1 1 246 -617 2309 104 0 0 chr18 16127285 16127583 -69861351 - AluSg SINE Alu -12 298 1 3854 201 65 46 chr18 16127583 16128178 -69860756 + MER21B LTR ERV1 246 863 0 228 301 54 21 chr18 16128321 16128414 -69860520 - L2 LINE L2 -2 3311 3216 267 265 0 29 chr18 16128435 16128503 -69860431 + L2 LINE L2 2685 2750 -564 2170 171 77 0 chr18 16128504 16128932 -69860002 + L1MB2 LINE L1 5686 6146 -25 2067 100 43 10 chr18 16128947 16129246 -69859688 + AluSc SINE Alu 1 309 0 916 241 94 82 chr18 16129512 16130035 -69858899 + L2 LINE L2 2736 3287 -26 327 271 10 10 chr18 16130044 16130140 -69858794 + GA-rich Low_complexity Low_complexity 2 97 0 2210 121 0 0 chr18 16130243 16130540 -69858394 - AluSx SINE Alu -15 297 1 267 105 0 0 chr18 16131033 16131071 -69857863 - Alu SINE Alu -263 39 2 1164 168 21 116 chr18 16131205 16131315 -69857619 - MER33 DNA MER1_type -2263 322 203 1697 181 0 19 chr18 16131315 16131629 -69857305 - AluJo SINE Alu -4 308 1 1164 168 21 116 chr18 16131629 16131706 -69857228 - MER33 DNA MER1_type -2382 203 120 1927 128 32 3 chr18 16131706 16131988 -69856946 - AluSx SINE Alu -22 290 1 1164 168 21 116 chr18 16131988 16132127 -69856807 - MER33 DNA MER1_type -2465 120 26 1007 297 62 37 chr18 16132445 16132926 -69856008 - L2 LINE L2 -12 3301 2809 499 243 243 0 chr18 16132933 16133077 -69855857 - MER5A DNA MER1_type -1 188 10 1412 193 48 108 chr18 16133114 16133595 -69855339 - L2 LINE L2 -1102 2212 1761 2095 213 105 18 chr18 16133599 16133632 -69855302 - MLT1F LTR MaLR 0 542 513 1925 140 3 35 chr18 16133632 16133946 -69854988 + AluJb SINE Alu 1 304 -8 2095 213 105 18 chr18 16133946 16134406 -69854528 - MLT1F LTR MaLR -29 513 6 2946 242 53 24 chr18 16134411 16135313 -69853621 - L2 LINE L2 -1552 1762 835 21 0 0 0 chr18 16135493 16135514 -69853420 + AT_rich Low_complexity Low_complexity 1 21 0 2423 66 3 3 chr18 16135618 16135920 -69853014 - AluY SINE Alu -9 302 1 2208 75 3 41 chr18 16136423 16136716 -69852218 - AluSp SINE Alu -31 282 1 2348 81 10 10 chr18 16136750 16137058 -69851876 + AluY SINE Alu 1 308 -3 25 0 0 0 chr18 16137058 16137083 -69851851 + AT_rich Low_complexity Low_complexity 1 25 0 2200 127 3 0 chr18 16137087 16137394 -69851540 + AluSg SINE Alu 1 308 -2 584 209 25 13 chr18 16137396 16137554 -69851380 + L1M4 LINE L1 4164 4323 -1823 685 183 33 0 chr18 16137554 16137674 -69851260 + FLAM_C SINE Alu 2 125 -8 470 219 35 0 chr18 16137704 16137818 -69851116 + L1M4 LINE L1 4489 4606 -1540 1562 155 125 11 chr18 16138460 16138724 -69850210 + AluJo SINE Alu 1 294 -8 1077 73 0 0 chr18 16139305 16139441 -69849493 + AluSq/x SINE Alu 1 136 -176 2508 74 0 0 chr18 16139441 16139739 -69849195 + AluY SINE Alu 1 298 -13 270 83 21 0 chr18 16139739 16139787 -69849147 + L1MA1 LINE L1 6250 6298 -4 432 340 34 5 chr18 16140005 16140211 -69848723 - L1ME LINE L1 -369 5752 5541 264 248 97 44 chr18 16140313 16140426 -69848508 - MIR SINE MIR -41 221 103 2001 146 65 19 chr18 16140471 16140793 -69848141 - MER1B DNA MER1_type 0 337 1 307 220 220 62 chr18 16140854 16141031 -69847903 - MER63 DNA MER1_type -2 1059 4 860 265 186 42 chr18 16141184 16141704 -69847230 + L2 LINE L2 4 598 -2716 1691 139 60 4 chr18 16141838 16142105 -69846829 - AluJb SINE Alu -30 282 1 2272 100 0 3 chr18 16142377 16142678 -69846256 + AluSq SINE Alu 1 300 -13 2250 107 0 0 chr18 16143370 16143668 -69845266 + AluSg SINE Alu 1 298 -12 3357 166 67 31 chr18 16143686 16144402 -69844532 + L1MB7 LINE L1 5427 6168 -16 1521 174 78 64 chr18 16144898 16145334 -69843600 - MSTB2 LTR MaLR -1 456 15 2221 102 17 0 chr18 16146125 16146420 -69842514 + AluSx SINE Alu 1 300 -12 1562 155 125 11 chr18 16146959 16147223 -69841711 + AluJo SINE Alu 1 294 -8 1956 98 0 82 chr18 16147804 16147940 -69840994 + AluSx SINE Alu 1 147 -165 2529 81 0 0 chr18 16147940 16148249 -69840685 + AluY SINE Alu 1 309 -2 1956 98 0 82 chr18 16148249 16148459 -69840475 + AluSx SINE Alu 147 312 0 22 56 0 0 chr18 16148642 16148678 -69840256 + AT_rich Low_complexity Low_complexity 1 36 0 640 154 331 0 chr18 16149395 16149564 -69839370 - MER46A DNA MER2_type -11 225 1 998 81 0 22 chr18 16149764 16149900 -69839034 - AluSq/x SINE Alu -179 133 1 1495 194 24 7 chr18 16149985 16150274 -69838660 - AluJb SINE Alu -18 294 1 180 0 0 0 chr18 16150275 16150295 -69838639 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 763 165 8 16 chr18 16150295 16150416 -69838518 - FLAM_C SINE Alu -22 121 2 1121 248 88 20 chr18 16150538 16150889 -69838045 - L1MB5 LINE L1 -1174 4972 4598 3521 200 19 29 chr18 16150890 16151280 -69837654 + L1MB5 LINE L1 4943 5336 -838 2100 151 11 22 chr18 16151280 16151644 -69837290 + L1PB4 LINE L1 5797 6156 0 3521 200 19 29 chr18 16151644 16152142 -69836792 + L1MB5 LINE L1 5336 5816 -358 2332 103 3 0 chr18 16152142 16152453 -69836481 + AluSp SINE Alu 2 313 0 3521 200 19 29 chr18 16152453 16152670 -69836264 + L1MB5 LINE L1 5816 6034 -140 2129 113 3 3 chr18 16152733 16153033 -69835901 - AluSc SINE Alu -9 300 1 1725 177 3 7 chr18 16153033 16153315 -69835619 + AluJb SINE Alu 3 284 -28 205 368 26 13 chr18 16153433 16153509 -69835425 + MER5A DNA MER1_type 40 116 -73 356 315 39 97 chr18 16153861 16154169 -69834765 + L1ME4a LINE L1 5511 5800 -2008 2221 111 0 7 chr18 16154181 16154488 -69834446 + AluY SINE Alu 5 309 -2 219 308 98 31 chr18 16154628 16154852 -69834082 + L2 LINE L2 1923 2161 -1153 212 343 152 0 chr18 16155013 16155112 -69833822 + L2 LINE L2 3154 3267 -5 422 223 58 65 chr18 16155334 16155473 -69833461 + MIR3 SINE MIR 25 162 -46 2345 103 0 0 chr18 16155576 16155878 -69833056 + AluSq SINE Alu 1 302 -11 1468 277 27 27 chr18 16156140 16156614 -69832320 - L2 LINE L2 -262 3051 2576 2014 137 0 26 chr18 16156614 16156927 -69832007 + AluJb SINE Alu 1 305 -7 1468 277 27 27 chr18 16156927 16157013 -69831921 - L2 LINE L2 -737 2576 2491 646 261 116 6 chr18 16157105 16157423 -69831511 + L1ME4a LINE L1 5757 6109 -12 32 0 0 0 chr18 16157423 16157455 -69831479 + AT_rich Low_complexity Low_complexity 1 32 0 2163 120 3 3 chr18 16157508 16157809 -69831125 - AluSx SINE Alu -11 301 1 390 282 128 49 chr18 16158222 16158586 -69830348 + MLT1K LTR MaLR 1 376 -33 337 271 136 0 chr18 16158621 16158739 -69830195 + MIR SINE MIR 69 202 -60 2262 121 0 0 chr18 16158768 16159074 -69829860 + AluSx SINE Alu 1 306 -6 2412 94 0 3 chr18 16159216 16159525 -69829409 + AluSc SINE Alu 1 308 -1 2095 120 3 7 chr18 16160027 16160326 -69828608 - AluSq SINE Alu -15 298 1 1488 199 42 83 chr18 16160986 16161152 -69827782 + L1ME1 LINE L1 5724 5895 -271 2430 81 0 7 chr18 16161152 16161460 -69827474 + AluSx SINE Alu 1 306 -6 1488 199 42 83 chr18 16161460 16161751 -69827183 + L1ME1 LINE L1 5895 6162 -4 2138 95 20 10 chr18 16161896 16162191 -69826743 - AluSx SINE Alu -14 298 1 188 378 71 20 chr18 16162359 16162457 -69826477 + L2 LINE L2 3121 3223 -49 2185 160 21 6 chr18 16162559 16162891 -69826043 + MER1B DNA MER1_type 1 337 0 1774 143 3 88 chr18 16163075 16163404 -69825530 - AluJo SINE Alu -11 301 1 2076 103 3 72 chr18 16163434 16163753 -69825181 + AluSx SINE Alu 1 297 -15 201 74 0 0 chr18 16164117 16164144 -69824790 + (T)n Simple_repeat Simple_repeat 1 27 0 2130 110 3 0 chr18 16164841 16165166 -69823768 - AluSp SINE Alu 0 326 1 1485 206 14 3 chr18 16165186 16165477 -69823457 - AluJb SINE Alu -12 300 7 598 333 56 51 chr18 16165504 16165898 -69823036 + L2 LINE L2 2918 3313 0 1820 163 3 10 chr18 16166576 16166877 -69822057 + AluJo SINE Alu 1 299 -13 1236 273 60 15 chr18 16166938 16167341 -69821593 + LTR16A LTR ERVL 16 436 -14 309 235 61 83 chr18 16167558 16167690 -69821244 + MLT1K LTR MaLR 103 231 -357 593 251 18 35 chr18 16167812 16167983 -69820951 + MLT1K LTR MaLR 405 572 -16 316 333 35 35 chr18 16168360 16168558 -69820376 + MIR SINE MIR 64 261 -1 22 35 0 0 chr18 16169196 16169225 -69819709 + AT_rich Low_complexity Low_complexity 1 29 0 1713 175 11 0 chr18 16169372 16169652 -69819282 - AluJb SINE Alu -28 284 2 541 274 9 0 chr18 16169690 16169803 -69819131 + AluJb SINE Alu 137 250 -62 957 155 0 128 chr18 16169803 16170061 -69818873 + AluJo SINE Alu 85 309 -3 216 182 0 0 chr18 16170677 16170721 -69818213 + (CA)n Simple_repeat Simple_repeat 2 45 0 1263 299 127 3 chr18 16170946 16171515 -69817419 + L1MC4a LINE L1 5257 5895 -1913 14121 116 60 42 chr18 16172630 16172680 -69816254 + Tigger1 DNA MER2_type 1 49 -2369 2057 114 7 13 chr18 16172680 16172979 -69815955 - AluSx SINE Alu -15 297 1 14121 116 60 42 chr18 16172979 16175028 -69813906 + Tigger1 DNA MER2_type 49 2152 -266 811 216 68 0 chr18 16175028 16175190 -69813744 - FAM SINE Alu -1 174 2 14121 116 60 42 chr18 16175190 16175462 -69813472 + Tigger1 DNA MER2_type 2152 2417 -1 1493 189 30 27 chr18 16176035 16176336 -69812598 + AluJo SINE Alu 1 302 -10 2587 50 0 3 chr18 16176338 16176667 -69812267 + AluY SINE Alu 1 328 0 23 0 0 0 chr18 16176671 16176694 -69812240 + AT_rich Low_complexity Low_complexity 1 23 0 369 0 0 0 chr18 16177401 16177442 -69811492 + (CA)n Simple_repeat Simple_repeat 2 42 0 316 323 133 57 chr18 16177614 16177893 -69811041 + L2 LINE L2 2914 3213 -59 294 293 41 32 chr18 16177893 16178016 -69810918 + MIR SINE MIR 137 260 -2 2258 97 3 19 chr18 16178046 16178356 -69810578 - AluSc SINE Alu -4 305 1 210 272 201 30 chr18 16178394 16178563 -69810371 - L3 LINE CR1 -238 1339 1142 28 48 0 0 chr18 16178885 16178927 -69810007 + AT_rich Low_complexity Low_complexity 1 42 0 2397 62 31 0 chr18 16179133 16179421 -69809513 + AluY SINE Alu 1 297 -14 361 286 122 96 chr18 16179588 16179965 -69808969 - L2 LINE L2 -79 3193 2807 425 310 94 27 chr18 16180224 16180436 -69808498 - L2 LINE L2 -1 3312 3073 2498 61 0 3 chr18 16180436 16180732 -69808202 + AluY SINE Alu 1 295 -16 425 310 94 27 chr18 16180732 16180816 -69808118 - L2 LINE L2 -240 3073 2996 1106 163 237 29 chr18 16181720 16181965 -69806969 - AluJo SINE Alu -6 296 1 24 53 0 0 chr18 16182087 16182125 -69806809 + AT_rich Low_complexity Low_complexity 1 38 0 825 173 0 0 chr18 16182416 16182549 -69806385 - FLAM_C SINE Alu 0 133 1 216 239 296 0 chr18 16182933 16183004 -69805930 + MIR SINE MIR 105 196 -66 481 210 30 10 chr18 16184774 16184874 -69804060 - U13 snRNA snRNA -2 102 1 369 0 0 0 chr18 16185281 16185322 -69803612 + (CA)n Simple_repeat Simple_repeat 2 42 0 21 0 0 0 chr18 16185388 16185409 -69803525 + AT_rich Low_complexity Low_complexity 1 21 0 1160 186 57 49 chr18 16185735 16185999 -69802935 + MLT2B3 LTR ERVL 1 266 -288 809 153 0 0 chr18 16185997 16186121 -69802813 + MLT2B3 LTR ERVL 385 508 -46 * 516 173 25 0 chr18 16186127 16186208 -69802726 - FLAM_A SINE Alu -59 83 1 385 109 0 0 chr18 16186223 16186278 -69802656 + MLT2B3 LTR ERVL 461 515 0 244 256 81 0 chr18 16186285 16186371 -69802563 - MIR SINE MIR -5 257 165 23 0 0 0 chr18 16186390 16186413 -69802521 + AT_rich Low_complexity Low_complexity 1 23 0 2166 134 0 0 chr18 16187027 16187332 -69801602 + AluSg SINE Alu 1 305 -5 413 295 80 72 chr18 16187595 16187832 -69801102 - MIR SINE MIR -2 260 22 326 236 5 62 chr18 16188719 16188911 -69800023 + MER112 DNA MER1_type 1 259 -1 1557 239 67 15 chr18 16188930 16189407 -69799527 + L1M4 LINE L1 4194 4695 -1451 469 279 25 0 chr18 16189409 16189531 -69799403 - MIR SINE MIR -133 129 5 303 301 48 0 chr18 16189676 16189759 -69799175 + MIR3 SINE MIR 81 167 -41 453 301 123 8 chr18 16189814 16190050 -69798884 + L2 LINE L2 2115 2377 -937 747 174 0 0 chr18 16190054 16190163 -69798771 - FLAM_A SINE Alu -33 109 1 667 256 117 40 chr18 16190166 16190439 -69798495 + L2 LINE L2 2455 2748 -566 279 326 136 45 chr18 16190438 16190510 -69798424 - L2 LINE L2 -2 3311 3247 * 2379 98 75 26 chr18 16190510 16190857 -69798077 + THE1B LTR MaLR 1 364 0 279 326 136 45 chr18 16190857 16190919 -69798015 - L2 LINE L2 -66 3247 3192 369 62 0 0 chr18 16190919 16190967 -69797967 + (CA)n Simple_repeat Simple_repeat 2 49 0 279 326 136 45 chr18 16190967 16190999 -69797935 - L2 LINE L2 -121 3192 3164 2223 113 13 7 chr18 16190999 16191309 -69797625 + AluSx SINE Alu 1 312 0 279 326 136 45 chr18 16191309 16191471 -69797463 - L2 LINE L2 -149 3164 2951 2277 106 0 0 chr18 16191736 16192028 -69796906 - AluSq SINE Alu -21 292 1 1238 205 5 0 chr18 16192093 16192298 -69796636 + Tigger7 DNA MER2_type 1 206 -2281 507 187 0 0 chr18 16192301 16192376 -69796558 - AluS SINE Alu -236 77 3 1929 242 103 26 chr18 16192377 16193137 -69795797 - L1MEc LINE L1 -3166 3049 2232 1589 172 0 46 chr18 16193153 16193331 -69795603 - MER33 DNA MER1_type -2273 312 156 2231 98 14 7 chr18 16193331 16193627 -69795307 - AluSx SINE Alu -14 298 1 1589 172 0 46 chr18 16193627 16193793 -69795141 - MER33 DNA MER1_type -2429 156 1 236 260 78 42 chr18 16193793 16193985 -69794949 - L1MEc LINE L1 -4138 2258 2060 2239 122 0 3 chr18 16194168 16194480 -69794454 - AluSx SINE Alu -1 311 1 547 175 10 10 chr18 16194660 16194757 -69794177 - AluJb SINE Alu -35 277 181 226 234 138 21 chr18 16194760 16194854 -69794080 - L1MEc LINE L1 -4752 1644 1540 1932 151 3 25 chr18 16195540 16195859 -69793075 - AluSx SINE Alu 0 312 1 991 118 0 22 chr18 16195864 16196000 -69792934 - FLAM_C SINE Alu 0 133 1 434 292 9 0 chr18 16196223 16196336 -69792598 + 7SK RNA RNA 6 119 -74 2370 64 0 0 chr18 16197343 16197644 -69791290 - AluY SINE Alu 0 301 1 1547 147 117 26 chr18 16197710 16197983 -69790951 + AluJo SINE Alu 5 302 -10 231 61 0 0 chr18 16198970 16199003 -69789931 + (TC)n Simple_repeat Simple_repeat 2 34 0 1770 124 94 0 chr18 16199021 16199309 -69789625 + AluSx SINE Alu 7 319 0 329 315 92 38 chr18 16199336 16199520 -69789414 + MIR SINE MIR 54 247 -15 1873 160 7 16 chr18 16199960 16200267 -69788667 - AluJb SINE Alu -2 310 7 2240 99 3 0 chr18 16200761 16201104 -69787830 - AluSc SINE Alu 0 348 5 222 189 54 14 chr18 16201513 16201587 -69787347 + L2 LINE L2 1712 1788 -1526 525 159 0 34 chr18 16201747 16201835 -69787099 - AluJo SINE Alu -7 305 221 1115 171 11 0 chr18 16201835 16202010 -69786924 - AluJo SINE Alu -124 188 12 506 342 144 13 chr18 16202029 16202500 -69786434 + L2 LINE L2 1805 2337 -977 441 273 0 60 chr18 16202505 16202655 -69786279 + L2 LINE L2 3169 3309 -4 22 0 0 0 chr18 16202705 16202727 -69786207 + AT_rich Low_complexity Low_complexity 1 22 0 2238 81 10 17 chr18 16202780 16203078 -69785856 + AluY SINE Alu 1 296 -15 4177 164 45 16 chr18 16203088 16203827 -69785107 + L1MA3 LINE L1 13 772 -6793 1818 180 122 22 chr18 16203848 16204265 -69784669 + LTR2B LTR ERV1 32 490 0 4692 150 16 20 chr18 16204265 16205063 -69783871 + L1MA3 LINE L1 771 1565 -6000 5508 184 24 56 chr18 16205087 16205380 -69783554 + L1MA3 LINE L1 4442 4743 -2822 2390 96 3 0 chr18 16205380 16205681 -69783253 + AluSg1 SINE Alu 1 302 -7 5508 184 24 56 chr18 16205681 16206152 -69782782 + L1MA3 LINE L1 4743 5227 -2338 3117 131 18 2 chr18 16206152 16206641 -69782293 + LOR1a LTR ERV1 1 497 0 5508 184 24 56 chr18 16206641 16207775 -69781159 + L1MA3 LINE L1 5227 6168 -1397 4363 81 78 38 chr18 16207789 16209062 -69779872 - pTR5 LTR ERV1 0 2468 1524 189 74 0 0 chr18 16209067 16209094 -69779840 + (TA)n Simple_repeat Simple_repeat 1 27 0 1664 139 0 20 chr18 16209128 16209431 -69779503 + L1MA3 LINE L1 6158 6454 -1111 5821 144 155 73 chr18 16209437 16211004 -69777930 - pTR5 LTR ERV1 0 2438 744 4729 118 22 0 chr18 16211004 16211928 -69777006 + L1MA3 LINE L1 6453 7398 -326 2000 139 0 7 chr18 16211930 16212259 -69776675 + AluSx SINE Alu 1 327 0 1310 123 33 16 chr18 16212259 16212492 -69776442 + L1MA3 LINE L1 7481 7724 0 2456 67 13 0 chr18 16212631 16212929 -69776005 - AluSp SINE Alu -11 302 1 1182 229 15 34 chr18 16212996 16213324 -69775610 - MER46C DNA MER2_type -4 334 13 328 275 0 0 chr18 16213565 16213645 -69775289 - Charlie4a DNA MER1_type 0 508 429 1046 173 0 16 chr18 16213646 16213831 -69775103 - AluJ SINE Alu -9 303 122 1127 101 24 6 chr18 16213858 16214027 -69774907 - L1PA10 LINE L1 0 6168 5997 889 177 0 14 chr18 16214027 16214174 -69774760 - AluJ SINE Alu -167 145 1 1102 212 120 11 chr18 16214179 16214537 -69774397 - Charlie4a DNA MER1_type -74 434 38 716 186 43 7 chr18 16214686 16214826 -69774108 - FAM SINE Alu -16 169 25 1488 226 20 11 chr18 16215842 16216192 -69772742 + L1MC2 LINE L1 28 380 -6046 3411 177 149 37 chr18 16216202 16216731 -69772203 + L1MC2 LINE L1 1152 1620 -4806 2239 124 3 0 chr18 16216731 16217038 -69771896 - AluSx SINE Alu -4 308 1 3411 177 149 37 chr18 16217038 16217118 -69771816 + L1MC2 LINE L1 1620 1690 -4736 1983 95 4 0 chr18 16217118 16217380 -69771554 + AluSg SINE Alu 1 263 -47 195 69 0 0 chr18 16217382 16217411 -69771523 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 2237 111 0 7 chr18 16217418 16217724 -69771210 + AluSx SINE Alu 1 304 -8 3411 177 149 37 chr18 16217724 16218393 -69770541 + L1MC2 LINE L1 1695 4105 -2321 1681 229 35 0 chr18 16218388 16218873 -69770061 + L1MC2 LINE L1 4467 4968 -1458 * 3759 182 33 12 chr18 16218875 16219628 -69769306 - ERVL LTR ERVL -3707 2057 1289 2342 80 7 10 chr18 16220423 16220722 -69768212 + AluY SINE Alu 1 298 -13 282 284 27 0 chr18 16221937 16222011 -69766923 - MIR SINE MIR -71 191 116 286 390 75 5 chr18 16222097 16222310 -69766624 - L3 LINE CR1 -444 1133 906 1840 100 0 0 chr18 16222445 16222684 -69766250 - AluY SINE Alu -18 293 55 250 354 130 22 chr18 16223002 16223023 -69765911 - L3 LINE CR1 -759 818 801 2208 126 0 0 chr18 16223023 16223317 -69765617 - AluSx SINE Alu -18 294 1 250 354 130 22 chr18 16223317 16223518 -69765416 - L3 LINE CR1 -776 801 572 447 353 82 40 chr18 16223706 16224111 -69764823 - L2 LINE L2 0 3272 2851 594 214 16 8 chr18 16224255 16224381 -69764553 - FLAM_A SINE Alu -6 127 1 1123 164 15 25 chr18 16224381 16224582 -69764352 + AluJo SINE Alu 110 308 -4 2778 166 90 8 chr18 16224598 16225580 -69763354 + L1MC2 LINE L1 5045 6111 -513 874 140 76 137 chr18 16225578 16225679 -69763255 + L1MC2 LINE L1 6330 6436 -188 * 2512 66 0 0 chr18 16225679 16225981 -69762953 - AluY SINE Alu -9 302 1 874 140 76 137 chr18 16225981 16226193 -69762741 + L1MC2 LINE L1 6436 6624 0 1165 294 192 28 chr18 16226219 16227157 -69761777 - L2 LINE L2 -630 2684 1593 31 0 0 0 chr18 16227236 16227267 -69761667 + AT_rich Low_complexity Low_complexity 1 31 0 1265 156 194 4 chr18 16227305 16227564 -69761370 - AluJo SINE Alu 0 304 1 1074 186 60 35 chr18 16227675 16227865 -69761069 + L1M4 LINE L1 4451 4652 -1494 2310 84 7 0 chr18 16227865 16228161 -69760773 + AluSx SINE Alu 1 298 -14 1074 186 60 35 chr18 16228161 16228255 -69760679 + L1M4 LINE L1 4652 4742 -1404 535 168 158 0 chr18 16228261 16228362 -69760572 + FLAM_C SINE Alu 3 119 -14 1276 137 5 5 chr18 16228378 16228575 -69760359 + AluSx SINE Alu 1 197 -115 24 77 0 0 chr18 16228766 16228818 -69760116 + AT_rich Low_complexity Low_complexity 1 52 0 203 220 34 0 chr18 16228857 16228916 -69760018 + GA-rich Low_complexity Low_complexity 1 61 0 2208 89 7 7 chr18 16229480 16229773 -69759161 - AluSc SINE Alu -16 293 1 189 0 0 0 chr18 16229796 16229817 -69759117 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2020 119 0 60 chr18 16230270 16230589 -69758345 - AluJb SINE Alu -10 302 3 21 0 0 0 chr18 16230897 16230918 -69758016 + AT_rich Low_complexity Low_complexity 1 21 0 813 136 0 0 chr18 16232107 16232225 -69756709 + AluJb SINE Alu 1 118 -194 207 0 0 0 chr18 16232232 16232255 -69756679 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 21 36 0 0 chr18 16232268 16232296 -69756638 + AT_rich Low_complexity Low_complexity 1 28 0 2458 75 0 0 chr18 16232427 16232735 -69756199 - AluY SINE Alu -3 308 1 1105 186 93 22 chr18 16233859 16234085 -69754849 + MIR SINE MIR 5 246 -16 1117 174 73 43 chr18 16234087 16234185 -69754749 + MER44D DNA MER2_type 3 97 -2394 2120 134 0 0 chr18 16234185 16234483 -69754451 - AluSx SINE Alu -14 298 1 1117 174 73 43 chr18 16234483 16234711 -69754223 + MER44D DNA MER2_type 97 609 0 2081 93 53 30 chr18 16234720 16235022 -69753912 - AluSg SINE Alu -1 309 1 375 130 43 43 chr18 16235078 16235170 -69753764 + L1MB7 LINE L1 6084 6175 -9 2327 70 0 13 chr18 16236234 16236532 -69752402 + AluY SINE Alu 1 294 -17 308 291 101 28 chr18 16236948 16237127 -69751807 + L1ME4a LINE L1 5717 5908 -213 511 268 22 7 chr18 16237655 16237793 -69751141 - MIR SINE MIR -118 144 5 310 301 48 0 chr18 16237938 16238021 -69750913 + MIR3 SINE MIR 81 167 -41 462 301 123 8 chr18 16238076 16238312 -69750622 + L2 LINE L2 2115 2377 -937 708 174 0 0 chr18 16238316 16238425 -69750509 - FLAM_A SINE Alu -33 109 1 682 256 117 40 chr18 16238428 16238701 -69750233 + L2 LINE L2 2455 2748 -566 273 261 101 50 chr18 16238700 16238772 -69750162 - L2 LINE L2 -2 3270 3188 * 2214 98 75 26 chr18 16238772 16239119 -69749815 + THE1B LTR MaLR 1 364 0 273 261 101 50 chr18 16239119 16239165 -69749769 - L2 LINE L2 -84 3188 3146 369 62 0 0 chr18 16239181 16239229 -69749705 + (CA)n Simple_repeat Simple_repeat 2 49 0 1319 176 13 54 chr18 16239261 16239574 -69749360 + AluSx SINE Alu 1 300 -12 569 225 123 59 chr18 16240361 16240597 -69748337 + MIR SINE MIR 11 261 -1 220 322 100 0 chr18 16240664 16240754 -69748180 - L2 LINE L2 -42 3230 3132 506 240 41 87 chr18 16240941 16241150 -69747784 - MIR SINE MIR -15 247 47 239 370 66 33 chr18 16241209 16241390 -69747544 + MIR3 SINE MIR 1 187 -21 317 335 155 6 chr18 16241499 16241660 -69747274 + MER5A DNA MER1_type 5 189 0 1920 134 86 36 chr18 16241801 16242218 -69746716 - L1MB8 LINE L1 -10 6168 5731 22 0 0 0 chr18 16242225 16242247 -69746687 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr18 16242579 16242601 -69746333 + AT_rich Low_complexity Low_complexity 1 22 0 186 277 85 64 chr18 16242615 16242709 -69746225 + L2 LINE L2 2818 2913 -359 390 225 141 79 chr18 16242830 16243057 -69745877 - L2 LINE L2 -936 2378 2138 431 250 100 62 chr18 16243271 16243431 -69745503 - MIR3 SINE MIR -35 173 8 772 182 0 0 chr18 16243689 16243821 -69745113 - FLAM_A SINE Alu -1 132 1 286 343 89 91 chr18 16244352 16244493 -69744441 - L2 LINE L2 -7 3265 3125 2313 80 13 13 chr18 16244493 16244804 -69744130 + AluSp SINE Alu 1 311 -2 286 343 89 91 chr18 16244804 16245100 -69743834 - L2 LINE L2 -147 3125 2829 325 182 109 153 chr18 16245157 16245497 -69743437 + L1ME4a LINE L1 5758 6082 -39 414 75 30 30 chr18 16245521 16245588 -69743346 + Tigger2 DNA MER2_type 3 69 -2649 * 1670 126 141 40 chr18 16245578 16245823 -69743111 + Tigger2 DNA MER2_type 2273 2492 -226 1628 144 0 92 chr18 16245823 16246129 -69742805 + AluJo SINE Alu 3 280 -32 204 40 0 0 chr18 16246129 16246154 -69742780 + (TAA)n Simple_repeat Simple_repeat 2 26 0 1670 126 141 40 chr18 16246154 16246312 -69742622 + Tigger2 DNA MER2_type 2491 2718 0 409 321 88 0 chr18 16246446 16246583 -69742351 - L2 LINE L2 -3 3269 3121 31 26 0 0 chr18 16247542 16247580 -69741354 + AT_rich Low_complexity Low_complexity 1 38 0 441 0 0 0 chr18 16248091 16248140 -69740794 + (CA)n Simple_repeat Simple_repeat 2 50 0 325 227 55 18 chr18 16249676 16249786 -69739148 + MLT1L LTR MaLR 410 523 -92 1317 202 187 45 chr18 16249831 16250193 -69738741 - L1MC4 LINE L1 0 8042 7733 1546 172 20 53 chr18 16250193 16250495 -69738439 - AluJo SINE Alu -16 296 5 1317 202 187 45 chr18 16250495 16250725 -69738209 - L1MC4 LINE L1 -309 7733 7366 1962 216 49 47 chr18 16250725 16251317 -69737617 + MLT1E LTR MaLR 1 593 0 1255 201 67 56 chr18 16251322 16251660 -69737274 - L1MC4 LINE L1 -681 7361 7015 1635 180 10 7 chr18 16251660 16251955 -69736979 - AluJo SINE Alu -16 296 1 1255 201 67 56 chr18 16251955 16252048 -69736886 - L1MC4 LINE L1 -1027 7015 6925 1837 127 24 31 chr18 16252072 16252364 -69736570 + AluSx SINE Alu 1 290 -22 1264 92 12 0 chr18 16252543 16252707 -69736227 + AluSg/x SINE Alu 95 260 -50 1116 278 49 19 chr18 16252708 16253353 -69735581 + L2 LINE L2 2496 3226 -87 1878 130 7 11 chr18 16253942 16254219 -69734715 + AluSx SINE Alu 1 276 -36 2217 113 0 3 chr18 16255113 16255422 -69733512 - AluSx SINE Alu 0 312 5 2333 52 17 0 chr18 16455953 16456242 -69532692 - AluSg SINE Alu -15 295 2 387 254 114 47 chr18 16456444 16456637 -69532297 - MIR SINE MIR -1 261 56 238 253 33 88 chr18 16459333 16459424 -69529510 - L2 LINE L2 -1 3271 3186 747 202 23 0 chr18 16459492 16459621 -69529313 + AluJo/FLAM SINE Alu 1 132 -170 1213 108 0 12 chr18 16459623 16459789 -69529145 + AluSq SINE Alu 1 164 -149 412 113 0 0 chr18 16459789 16459842 -69529092 + AluS SINE Alu 225 277 -33 213 39 0 0 chr18 16459843 16459869 -69529065 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 45 55 0 0 chr18 16459869 16459942 -69528992 + AT_rich Low_complexity Low_complexity 1 73 0 189 244 89 67 chr18 16461283 16461373 -69527561 - MIR SINE MIR -55 153 62 * 261 393 0 0 chr18 16461354 16461443 -69527491 + L2 LINE L2 3163 3251 -21 2185 90 4 0 chr18 16461565 16461868 -69527066 - AluSc SINE Alu 0 304 1 297 0 0 0 chr18 16462206 16462239 -69526695 + (TG)n Simple_repeat Simple_repeat 1 33 0 813 162 0 52 chr18 16462378 16462514 -69526420 + FLAM_C SINE Alu 2 130 -3 2276 67 3 17 chr18 16463086 16463386 -69525548 + AluY SINE Alu 10 305 -6 1414 200 4 12 chr18 16463986 16464241 -69524693 + AluJo SINE Alu 30 282 -30 2129 83 0 0 chr18 16464291 16464555 -69524379 - AluSc SINE Alu -11 298 35 806 218 24 29 chr18 16464641 16464811 -69524123 - FRAM SINE Alu -4 172 4 1709 155 0 11 chr18 16464990 16465261 -69523673 + AluJo SINE Alu 23 290 -22 559 251 214 71 chr18 16465302 16465762 -69523172 - L2 LINE L2 -37 3276 2883 2244 115 0 0 chr18 16465762 16466058 -69522876 - AluSx SINE Alu -16 296 1 559 251 214 71 chr18 16466058 16466086 -69522848 - L2 LINE L2 -430 2883 2860 2005 108 44 20 chr18 16466086 16466382 -69522552 + AluSg SINE Alu 1 303 -7 559 251 214 71 chr18 16466382 16466554 -69522380 - L2 LINE L2 -453 2860 2526 2449 66 0 0 chr18 16467337 16467639 -69521295 + AluY SINE Alu 1 302 -9 2225 109 3 0 chr18 16468003 16468307 -69520627 + AluSx SINE Alu 1 305 -7 2140 115 14 0 chr18 16468963 16469259 -69519675 - AluY SINE Alu -11 300 1 791 177 109 6 chr18 16469260 16469435 -69519499 + MER3 DNA MER1_type 15 207 -2 2175 79 55 7 chr18 16469839 16470130 -69518804 - AluY SINE Alu -6 305 1 2132 111 13 3 chr18 16470339 16470637 -69518297 + AluSx SINE Alu 1 301 -11 262 270 322 23 chr18 16471369 16471543 -69517391 + MIR SINE MIR 25 250 -12 976 229 114 40 chr18 16471928 16472161 -69516773 - MER2 DNA MER2_type -1 344 83 2125 102 14 3 chr18 16472161 16472454 -69516480 + AluSx SINE Alu 1 296 -16 976 229 114 40 chr18 16472454 16472517 -69516417 - MER2 DNA MER2_type -262 83 26 2187 99 20 0 chr18 16472792 16473086 -69515848 + AluSp SINE Alu 1 300 -13 24 53 0 0 chr18 16473095 16473133 -69515801 + AT_rich Low_complexity Low_complexity 1 38 0 2300 95 0 7 chr18 16473309 16473613 -69515321 + AluSp SINE Alu 1 302 -11 374 100 0 0 chr18 16473617 16473667 -69515267 + Alu SINE Alu 247 296 -4 860 186 7 7 chr18 16473678 16473823 -69515111 + AluJb SINE Alu 2 146 -166 1034 98 0 0 chr18 16473823 16473955 -69514979 + AluY SINE Alu 1 132 -179 801 98 0 0 chr18 16473955 16474057 -69514877 + AluSg/x SINE Alu 187 288 -22 215 21 0 83 chr18 16474057 16474105 -69514829 + (TA)n Simple_repeat Simple_repeat 2 45 0 347 300 24 35 chr18 16474231 16474321 -69514613 - L1ME4a LINE L1 -206 5915 5826 2002 96 0 11 chr18 16474321 16474592 -69514342 - AluSq SINE Alu -14 299 32 347 300 24 35 chr18 16474592 16474671 -69514263 - L1ME4a LINE L1 -295 5826 5748 1816 134 19 39 chr18 16474721 16475028 -69513906 - AluSx SINE Alu -11 301 1 2190 114 23 7 chr18 16475170 16475476 -69513458 + AluSx SINE Alu 1 311 -1 1717 152 3 76 chr18 16475603 16475933 -69513001 + AluJb SINE Alu 1 306 -6 1418 109 0 5 chr18 16476066 16476259 -69512675 - AluSg/x SINE Alu 0 310 119 1519 179 48 11 chr18 16476542 16476815 -69512119 + AluJb SINE Alu 1 283 -29 266 189 94 0 chr18 16476918 16476971 -69511963 - L1MA3 LINE L1 -69 6236 6179 4330 209 58 84 chr18 16476975 16477921 -69511013 - L1M4 LINE L1 -874 5336 4444 2295 93 7 0 chr18 16477921 16478221 -69510713 - AluSc SINE Alu -3 306 5 4330 209 58 84 chr18 16478221 16478841 -69510093 - L1M4 LINE L1 -1766 4444 3810 12893 113 24 22 chr18 16478841 16479466 -69509468 + Tigger1 DNA MER2_type 1 623 -1795 2104 125 0 10 chr18 16479466 16479770 -69509164 + AluSx SINE Alu 1 301 -11 12893 113 24 22 chr18 16479770 16480131 -69508803 + Tigger1 DNA MER2_type 623 982 -1436 2400 53 0 20 chr18 16480131 16480432 -69508502 + AluY SINE Alu 7 301 -10 12893 113 24 22 chr18 16480432 16481410 -69507524 + Tigger1 DNA MER2_type 982 1970 -448 454 237 101 0 chr18 16481410 16481549 -69507385 - L1MEc LINE L1 -4174 2043 1891 875 160 0 0 chr18 16481551 16481676 -69507258 + FLAM_C SINE Alu 1 125 -8 5923 86 35 28 chr18 16481688 16481873 -69507061 - L1PB2 LINE L1 -2 6149 5967 1788 140 19 42 chr18 16481873 16482180 -69506754 - AluSx SINE Alu -12 300 1 5923 86 35 28 chr18 16482180 16482976 -69505958 - L1PB2 LINE L1 -184 5967 5161 587 193 109 0 chr18 16483063 16483182 -69505752 - FLAM_C SINE Alu -1 132 1 2089 132 0 20 chr18 16483302 16483606 -69505328 - AluSx SINE Alu -14 298 1 381 290 20 0 chr18 16483607 16483707 -69505227 - L1MEc LINE L1 -5130 1006 905 258 346 38 15 chr18 16483827 16483960 -69504974 - L1M4 LINE L1 -5218 913 778 475 253 176 28 chr18 16484212 16484446 -69504488 - L1M4 LINE L1 -5621 510 4 759 203 30 24 chr18 16484716 16484980 -69503954 + MLT1D LTR MaLR 114 427 -78 834 154 0 37 chr18 16485010 16485146 -69503788 + FLAM_C SINE Alu 2 132 -11 321 127 45 31 chr18 16485168 16485243 -69503691 + MLT1D LTR MaLR 437 503 -2 203 302 198 0 chr18 16486970 16487066 -69501868 - MIR SINE MIR -19 243 129 733 240 91 5 chr18 16487090 16487298 -69501636 + MIR SINE MIR 37 262 0 1492 96 30 0 chr18 16487330 16487527 -69501407 + AluSx SINE Alu 1 203 -109 899 257 95 3 chr18 16488560 16488864 -69500070 - L1MEc LINE L1 -6030 366 35 1053 242 42 24 chr18 16489051 16489476 -69499458 + L1M4 LINE L1 2903 3335 -2811 738 176 37 59 chr18 16489472 16489659 -69499275 + L1MB4 LINE L1 5998 6180 0 * 2245 80 6 48 chr18 16489826 16490138 -69498796 - AluY SINE Alu -12 299 1 638 120 0 0 chr18 16490192 16490284 -69498650 - AluS SINE Alu 0 312 221 583 156 0 0 chr18 16490893 16490983 -69497951 + AluSg/x SINE Alu 219 308 -4 2122 88 25 50 chr18 16491005 16491322 -69497612 + AluSx SINE Alu 1 309 -3 356 120 0 0 chr18 16491771 16491821 -69497113 - AluSp/q SINE Alu -38 265 216 2228 94 14 0 chr18 16491821 16492109 -69496825 - AluSp SINE Alu -21 292 1 270 233 0 0 chr18 16492113 16492173 -69496761 - FLAM SINE Alu -1 132 73 2332 88 20 0 chr18 16492416 16492721 -69496213 + AluSp SINE Alu 1 311 -2 2064 135 0 3 chr18 16492745 16493048 -69495886 + AluSx SINE Alu 1 302 -10 1622 154 75 34 chr18 16493349 16493641 -69495293 - AluJo SINE Alu -2 310 7 608 182 23 53 chr18 16493810 16493942 -69494992 - FLAM_C SINE Alu -5 128 1 29 0 0 0 chr18 16494286 16494315 -69494619 + AT_rich Low_complexity Low_complexity 1 29 0 1014 144 48 0 chr18 16494337 16494504 -69494430 - FRAM SINE Alu -3 173 1 2096 129 3 0 chr18 16494528 16494815 -69494119 - AluSg SINE Alu -22 288 1 2235 101 0 3 chr18 16494816 16495113 -69493821 - AluSx SINE Alu -16 296 1 2299 100 0 3 chr18 16496295 16496596 -69492338 + AluSx SINE Alu 1 300 -12 279 266 137 24 chr18 16496704 16496828 -69492106 + MER5B DNA MER1_type 18 155 -23 1738 174 0 28 chr18 16496852 16497169 -69491765 + AluJo SINE Alu 1 308 -4 26 0 0 0 chr18 16497566 16497592 -69491342 + AT_rich Low_complexity Low_complexity 1 26 0 2448 87 0 0 chr18 16497812 16498123 -69490811 + AluY SINE Alu 1 311 0 2447 84 0 10 chr18 16498357 16498666 -69490268 - AluSx SINE Alu -6 306 1 189 0 0 0 chr18 16498977 16498998 -69489936 + (T)n Simple_repeat Simple_repeat 1 21 0 225 0 0 0 chr18 16499123 16499148 -69489786 + (A)n Simple_repeat Simple_repeat 1 25 0 12972 60 11 0 chr18 16499148 16500721 -69488213 - HERVL LTR ERVL -2748 2906 1317 1069 158 12 0 chr18 16500744 16500915 -69488019 + AluSg/x SINE Alu 137 309 -1 547 153 0 0 chr18 16500915 16501013 -69487921 + L1MCa LINE L1 1830 1927 -4499 1634 193 0 14 chr18 16501524 16501814 -69487120 + AluJb SINE Alu 1 286 -26 781 62 0 0 chr18 16501860 16501956 -69486978 + HY3 scRNA scRNA 1 96 -5 2702 42 0 0 chr18 16501990 16502299 -69486635 + AluY SINE Alu 1 309 -2 1035 152 49 0 chr18 16502434 16502598 -69486336 - FRAM SINE Alu -4 172 1 324 161 0 74 chr18 16502602 16502683 -69486251 - MLT1B LTR MaLR -217 173 99 3215 63 58 28 chr18 16502684 16503115 -69485819 - MLT2A1 LTR ERVL 0 444 1 16884 102 21 12 chr18 16503115 16504668 -69484266 - ERVL LTR ERVL 0 5654 4117 1858 124 8 4 chr18 16504668 16504927 -69484007 - AluSx SINE Alu -28 284 25 16884 102 21 12 chr18 16504927 16504965 -69483969 - ERVL LTR ERVL -1537 4117 4081 2530 41 0 3 chr18 16504965 16505260 -69483674 + AluY SINE Alu 1 294 -17 16884 102 21 12 chr18 16505260 16506392 -69482542 - ERVL LTR ERVL -1573 4081 2933 2555 66 0 0 chr18 16506393 16506701 -69482233 + AluY SINE Alu 1 305 -6 2049 141 3 0 chr18 16506828 16507127 -69481807 + AluSx SINE Alu 1 300 -12 804 158 0 8 chr18 16507304 16507431 -69481503 + FLAM_C SINE Alu 2 127 -16 2007 116 30 0 chr18 16508212 16508515 -69480419 + AluSq SINE Alu 1 312 -1 545 311 144 30 chr18 16508640 16509113 -69479821 + L1MC4 LINE L1 7453 7979 -63 1339 197 28 3 chr18 16509266 16509550 -69479384 + AluJb SINE Alu 1 291 -21 721 274 36 8 chr18 16509698 16509972 -69478962 + L1ME3A LINE L1 5637 5919 -251 810 218 41 6 chr18 16509978 16510148 -69478786 + L1ME3A LINE L1 5994 6169 -1 2086 118 0 10 chr18 16510152 16510458 -69478476 + AluSq SINE Alu 1 303 -10 311 283 47 9 chr18 16510543 16510649 -69478285 - L2 LINE L2 -10 3303 3194 2226 99 0 0 chr18 16510649 16510941 -69477993 + AluSq SINE Alu 1 292 -21 1744 105 4 35 chr18 16510944 16511202 -69477732 + AluSx SINE Alu 1 250 -62 1577 152 7 18 chr18 16511202 16511479 -69477455 + AluJb SINE Alu 38 311 -1 352 264 150 18 chr18 16511479 16511646 -69477288 - L2 LINE L2 -253 3060 2872 400 173 240 10 chr18 16511715 16511819 -69477115 + MER3 DNA MER1_type 77 204 -5 290 114 91 0 chr18 16511780 16511824 -69477110 - MER3 DNA MER1_type -119 90 43 * 1689 125 59 3 chr18 16511912 16512199 -69476735 + AluSx SINE Alu 1 303 -9 500 195 101 71 chr18 16512494 16512663 -69476271 + LTR45 LTR ERV1 352 525 0 372 223 269 10 chr18 16512663 16512856 -69476078 - L2 LINE L2 -544 2770 2528 21 0 0 0 chr18 16513491 16513512 -69475422 + AT_rich Low_complexity Low_complexity 1 21 0 2151 87 3 23 chr18 16513903 16514213 -69474721 + AluY SINE Alu 1 304 -7 1112 130 0 0 chr18 16514677 16514838 -69474096 - AluSg/x SINE Alu -18 294 134 1877 157 3 3 chr18 16514838 16515143 -69473791 - AluSx SINE Alu -7 305 1 541 228 66 35 chr18 16515243 16515471 -69473463 + L1MC5 LINE L1 7302 7536 -425 1428 108 145 8 chr18 16515480 16515719 -69473215 + HSMAR2 DNA Mariner 2 278 -1024 2223 77 3 3 chr18 16515719 16516016 -69472918 + AluY SINE Alu 1 297 -14 1827 125 3 40 chr18 16516025 16516161 -69472773 + AluSx SINE Alu 1 141 -171 2004 127 0 3 chr18 16516161 16516460 -69472474 + AluSq SINE Alu 1 298 -15 1827 125 3 40 chr18 16516460 16516619 -69472315 + AluSx SINE Alu 141 285 -27 2121 71 11 4 chr18 16516620 16516901 -69472033 + AluSg SINE Alu 4 286 -24 199 0 65 0 chr18 16516906 16516937 -69471997 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 2252 80 0 29 chr18 16516946 16517258 -69471676 + AluSq SINE Alu 1 303 -10 195 42 0 0 chr18 16517374 16517398 -69471536 + (A)n Simple_repeat Simple_repeat 1 24 0 259 238 71 24 chr18 16517399 16517433 -69471501 + MIR SINE MIR 174 205 -57 2044 122 3 0 chr18 16517433 16517729 -69471205 + AluSp SINE Alu 2 298 -15 259 238 71 24 chr18 16517729 16517778 -69471156 + MIR SINE MIR 205 261 -1 1365 185 52 31 chr18 16517809 16518096 -69470838 - AluJb SINE Alu -19 293 1 2268 79 0 10 chr18 16518838 16519143 -69469791 + AluY SINE Alu 1 302 -9 2080 92 0 57 chr18 16519592 16519907 -69469027 - AluSx SINE Alu -15 297 1 1299 219 81 35 chr18 16520033 16520403 -69468531 - L2 LINE L2 -8 3305 2919 220 261 230 50 chr18 16520419 16520489 -69468445 + L2 LINE L2 2066 2122 -1192 252 0 0 0 chr18 16520489 16520517 -69468417 + (CA)n Simple_repeat Simple_repeat 2 29 0 220 261 230 50 chr18 16520517 16520707 -69468227 + L2 LINE L2 2122 2373 -941 2202 109 0 6 chr18 16520731 16521044 -69467890 + AluSx SINE Alu 2 312 0 2877 156 34 22 chr18 16521046 16521156 -69467778 + L1MB2 LINE L1 5322 5429 -742 1720 123 28 0 chr18 16521156 16521432 -69467502 + AluSg SINE Alu 21 303 0 1971 115 24 7 chr18 16521432 16521728 -69467206 + AluSx SINE Alu 1 301 -11 2877 156 34 22 chr18 16521728 16522153 -69466781 + L1MB2 LINE L1 5428 5865 -306 1746 153 32 59 chr18 16522153 16522525 -69466409 - MLT1A1 LTR MaLR 0 365 4 183 260 110 41 chr18 16522849 16522922 -69466012 + L2 LINE L2 3194 3271 -1 351 44 0 0 chr18 16524200 16524245 -69464689 + (CA)n Simple_repeat Simple_repeat 2 46 0 369 130 0 0 chr18 16525032 16525086 -69463848 - AluSq SINE Alu -5 297 244 1347 101 5 0 chr18 16525088 16525276 -69463658 - AluSq SINE Alu -124 189 1 2287 77 3 0 chr18 16525398 16525698 -69463236 + AluSx SINE Alu 1 301 -11 416 162 61 88 chr18 16526205 16526353 -69462581 - L1MB7 LINE L1 -26 6158 6015 2275 91 0 0 chr18 16526366 16526664 -69462270 - AluSx SINE Alu -14 298 1 1840 183 19 3 chr18 16526698 16527058 -69461876 - L1MB7 LINE L1 -182 6002 5637 230 114 0 23 chr18 16527094 16527138 -69461796 + (CA)n Simple_repeat Simple_repeat 2 44 0 974 182 16 11 chr18 16527159 16527346 -69461588 - MLT2B1 LTR ERVL -40 480 293 887 145 63 0 chr18 16527358 16527517 -69461417 - FRAM SINE Alu 0 176 8 824 223 35 10 chr18 16527517 16527714 -69461220 - MLT2B1 LTR ERVL -318 202 1 1741 165 19 33 chr18 16527722 16528035 -69460899 - L1MB7 LINE L1 -542 5642 5332 2288 54 10 7 chr18 16528035 16528333 -69460601 - AluY SINE Alu -12 299 1 1741 165 19 33 chr18 16528333 16528504 -69460430 - L1MB7 LINE L1 -852 5332 5160 180 0 0 0 chr18 16528524 16528544 -69460390 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1954 103 7 0 chr18 16528551 16528824 -69460110 - AluSx SINE Alu -37 275 1 1835 116 7 14 chr18 16529371 16529689 -69459245 - AluSq SINE Alu 0 316 1 1188 172 9 43 chr18 16529884 16530116 -69458818 + AluJo SINE Alu 6 229 -83 244 266 104 45 chr18 16530154 16530376 -69458558 - L1ME4a LINE L1 -23 6098 5864 2236 82 0 7 chr18 16530968 16531262 -69457672 - AluSq SINE Alu -21 292 1 22 99 0 0 chr18 16531351 16531422 -69457512 + AT_rich Low_complexity Low_complexity 1 71 0 225 259 19 0 chr18 16531797 16531851 -69457083 + L2 LINE L2 3218 3272 0 1231 170 0 14 chr18 16532220 16532432 -69456502 + AluJb SINE Alu 1 209 -103 318 270 174 0 chr18 16532437 16532552 -69456382 + L2 LINE L2 2526 2660 -654 2058 91 3 7 chr18 16532867 16533191 -69455743 + AluY SINE Alu 1 323 0 2155 86 7 0 chr18 16533446 16533736 -69455198 + AluSq SINE Alu 1 292 -21 1558 148 41 0 chr18 16533823 16534131 -69454803 + AluJo SINE Alu 1 319 0 409 189 270 18 chr18 16534563 16534674 -69454260 - L2 LINE L2 -6 3307 3169 931 140 33 56 chr18 16534690 16534743 -69454191 + L1MA8 LINE L1 6079 6132 -159 2145 103 0 19 chr18 16534743 16535062 -69453872 + AluSq SINE Alu 1 313 0 931 140 33 56 chr18 16535062 16535222 -69453712 + L1MA8 LINE L1 6132 6287 -4 2034 119 0 22 chr18 16535909 16536228 -69452706 - AluSx SINE Alu 0 312 1 195 100 0 0 chr18 16537681 16537711 -69451223 + (TATAG)n Simple_repeat Simple_repeat 2 31 0 393 244 136 62 chr18 16537711 16537969 -69450965 - MLT1K LTR MaLR -5 583 307 339 219 156 106 chr18 16538291 16538547 -69450387 + MLT1L LTR MaLR 243 615 0 2416 63 7 0 chr18 16538598 16538897 -69450037 - AluY SINE Alu -10 301 1 331 298 65 0 chr18 16539219 16539343 -69449591 + L1MC5 LINE L1 7311 7442 -519 592 274 77 11 chr18 16539351 16539564 -69449370 - MLT1B LTR MaLR -3 379 155 228 67 0 0 chr18 16539565 16539595 -69449339 + (TTTTC)n Simple_repeat Simple_repeat 4 33 0 1547 192 7 0 chr18 16539615 16539902 -69449032 + AluJb SINE Alu 1 289 -23 250 282 184 10 chr18 16540244 16540347 -69448587 + L2 LINE L2 3193 3313 0 26 0 0 0 chr18 16540723 16540749 -69448185 + AT_rich Low_complexity Low_complexity 1 26 0 1826 100 63 0 chr18 16540977 16541246 -69447688 + AluSq SINE Alu 25 310 -3 365 291 122 33 chr18 16541327 16541508 -69447426 - L2 LINE L2 -1128 2186 1972 2124 108 8 101 chr18 16541508 16541886 -69447048 + MER61A LTR ERV1 1 343 0 365 291 122 33 chr18 16541886 16541975 -69446959 - L2 LINE L2 -1342 1972 1892 1533 184 33 10 chr18 16542060 16542364 -69446570 + AluJo SINE Alu 1 311 -1 32 56 0 14 chr18 16542567 16542593 -69446341 + AT_rich Low_complexity Low_complexity 1 26 -44 2303 92 0 3 chr18 16542593 16542897 -69446037 + AluSx SINE Alu 1 303 -9 32 56 0 14 chr18 16542897 16542941 -69445993 + AT_rich Low_complexity Low_complexity 26 70 0 198 0 0 0 chr18 16543072 16543094 -69445840 + (A)n Simple_repeat Simple_repeat 1 22 0 244 222 94 128 chr18 16544039 16544055 -69444879 - L1ME4a LINE L1 -5 6116 6101 2180 171 31 98 chr18 16544055 16544504 -69444430 + MER4A LTR ERV1 1 396 -204 1734 65 9 0 chr18 16544504 16544720 -69444214 - AluSc SINE Alu -53 256 39 2180 171 31 98 chr18 16544720 16544913 -69444021 + MER4A LTR ERV1 396 600 0 244 222 94 128 chr18 16544913 16545076 -69443858 - L1ME4a LINE L1 -20 6101 5943 2043 126 0 0 chr18 16545113 16545407 -69443527 - AluSx SINE Alu -18 294 1 824 240 6 0 chr18 16545458 16545629 -69443305 - FRAM SINE Alu -8 168 1 279 0 0 0 chr18 16545704 16545735 -69443199 + (A)n Simple_repeat Simple_repeat 1 31 0 243 61 0 0 chr18 16547130 16547163 -69441771 + (TATG)n Simple_repeat Simple_repeat 2 34 0 2011 93 0 50 chr18 16547163 16547463 -69441471 - AluSx SINE Alu -27 285 1 264 315 56 0 chr18 16547623 16547712 -69441222 + MLT1J LTR MaLR 109 202 -309 225 231 19 0 chr18 16547740 16547792 -69441142 + MLT1J LTR MaLR 257 309 -202 1842 136 0 41 chr18 16548592 16548909 -69440025 - AluSx SINE Alu -8 304 1 306 0 0 0 chr18 16548917 16548951 -69439983 + (T)n Simple_repeat Simple_repeat 1 34 0 2037 114 3 3 chr18 16549318 16549617 -69439317 - AluSg SINE Alu -11 299 1 1503 184 0 39 chr18 16549657 16549962 -69438972 + AluJo SINE Alu 1 293 -19 1928 126 31 0 chr18 16550184 16550478 -69438456 - AluJb SINE Alu -9 303 1 254 263 99 64 chr18 16550579 16550750 -69438184 + L1MEd LINE L1 2 178 -5941 262 295 67 0 chr18 16550870 16550975 -69437959 - L1M4 LINE L1 -879 5267 5156 1655 119 44 71 chr18 16551074 16551368 -69437566 + AluSg SINE Alu 1 286 -24 1431 168 13 42 chr18 16551468 16551778 -69437156 - AluJb SINE Alu -11 301 1 29 90 0 0 chr18 16552128 16552206 -69436728 + AT_rich Low_complexity Low_complexity 1 78 0 1527 192 21 14 chr18 16552207 16552498 -69436436 + AluJo SINE Alu 1 293 -9 1837 141 0 10 chr18 16552508 16552805 -69436129 + AluSg SINE Alu 1 294 -16 653 204 54 166 chr18 16553066 16553277 -69435657 + L2 LINE L2 1617 1753 -1561 1815 135 3 14 chr18 16553277 16553565 -69435369 - AluJo SINE Alu -24 288 4 653 204 54 166 chr18 16553565 16553798 -69435136 + L2 LINE L2 1753 2011 -1303 460 347 87 53 chr18 16554948 16555318 -69433616 + L2 LINE L2 2157 2513 -801 1840 159 0 6 chr18 16555318 16555632 -69433302 - AluJb SINE Alu 0 312 1 460 347 87 53 chr18 16555632 16556054 -69432880 + L2 LINE L2 2513 2976 -338 1384 162 72 32 chr18 16556268 16556546 -69432388 + AluJo SINE Alu 1 289 -23 180 333 0 0 chr18 16556594 16556642 -69432292 - L2 LINE L2 -9 3263 3216 895 209 19 0 chr18 16557029 16557187 -69431747 + FRAM SINE Alu 1 161 -5 405 0 0 0 chr18 16557478 16557523 -69431411 + (TG)n Simple_repeat Simple_repeat 2 46 0 1608 160 11 14 chr18 16557537 16557818 -69431116 - L1MB1 LINE L1 -44 6124 5845 959 283 128 33 chr18 16558057 16558346 -69430588 + L1M4 LINE L1 2445 2705 -3441 2430 88 0 0 chr18 16558346 16558641 -69430293 + AluSp SINE Alu 1 295 -18 959 283 128 33 chr18 16558641 16558881 -69430053 + L1M4 LINE L1 2705 2921 -3225 2021 139 0 7 chr18 16558881 16559182 -69429752 - AluSx SINE Alu -13 299 1 959 283 128 33 chr18 16559182 16559653 -69429281 + L1M4 LINE L1 2921 3541 -2605 504 242 17 0 chr18 16559675 16559795 -69429139 + L1M4 LINE L1 3716 3837 -2309 2180 113 10 6 chr18 16559805 16560116 -69428818 - AluSx SINE Alu 0 312 1 2796 192 84 74 chr18 16560123 16560358 -69428576 - L1ME1 LINE L1 -18 6148 5917 2417 97 0 0 chr18 16560358 16560668 -69428266 - AluSx SINE Alu -2 310 1 2796 192 84 74 chr18 16560668 16561241 -69427693 - L1ME1 LINE L1 -249 5917 5332 661 204 22 0 chr18 16561255 16561392 -69427542 - L1MB5 LINE L1 -9 6165 6026 1728 196 0 3 chr18 16562062 16562353 -69426581 - AluJb SINE Alu -20 292 3 1011 176 17 29 chr18 16562370 16562608 -69426326 - L1MB7 LINE L1 -5 6179 5945 2260 115 0 0 chr18 16563083 16563379 -69425555 - AluSx SINE Alu -16 296 1 2139 97 0 7 chr18 16564334 16564613 -69424321 + AluSx SINE Alu 1 277 -35 239 333 14 0 chr18 16564930 16564999 -69423935 - L2 LINE L2 -1 3271 3202 1919 116 13 36 chr18 16565007 16565309 -69423625 + AluSx SINE Alu 1 295 -17 1587 179 0 8 chr18 16565436 16565693 -69423241 - AluJb SINE Alu -57 255 1 266 255 75 78 chr18 16566239 16566533 -69422401 + L2 LINE L2 2373 2665 -649 264 284 163 7 chr18 16566705 16566846 -69422088 + L2 LINE L2 2915 3077 -195 2259 78 0 10 chr18 16566970 16567265 -69421669 - AluY SINE Alu -19 292 1 1541 233 60 87 chr18 16568235 16568848 -69420086 + L1ME3A LINE L1 5521 6117 -53 1060 304 108 20 chr18 16568934 16569622 -69419312 + L1MC4a LINE L1 5261 6008 -1800 1809 140 25 32 chr18 16572045 16572330 -69416604 - AluJb SINE Alu -29 283 1 2255 119 0 0 chr18 16572387 16572680 -69416254 + AluSx SINE Alu 1 293 -19 644 156 8 0 chr18 16572680 16572808 -69416126 + GA-rich Low_complexity Low_complexity 1 129 0 317 299 38 25 chr18 16572845 16573002 -69415932 + LTR16C LTR ERVL 330 488 -3 494 349 65 11 chr18 16573955 16574230 -69414704 + HERV16 LTR ERVL 1048 1337 -3659 338 301 0 0 chr18 16574509 16574592 -69414342 + HERV16 LTR ERVL 1719 1801 -3853 1807 316 82 58 chr18 16574721 16575163 -69413771 + HERV16 LTR ERVL 1998 2428 -3336 2370 78 0 0 chr18 16575163 16575471 -69413463 + AluSx SINE Alu 2 309 0 2197 124 0 0 chr18 16575471 16575769 -69413165 + AluSg SINE Alu 1 298 -12 1807 316 82 58 chr18 16575769 16576195 -69412739 + HERV16 LTR ERVL 2428 2903 -2861 2015 147 7 0 chr18 16576195 16576502 -69412432 + AluSx SINE Alu 1 309 -3 1807 316 82 58 chr18 16576502 16576750 -69412184 + HERV16 LTR ERVL 2903 3144 -2620 1302 208 170 43 chr18 16577014 16577413 -69411521 + MLT2B1 LTR ERVL 2 451 -69 248 0 31 0 chr18 16577413 16577445 -69411489 + (TC)n Simple_repeat Simple_repeat 2 34 0 3539 127 28 68 chr18 16577461 16577680 -69411254 + Tigger3b DNA MER2_type 6 232 -2796 1911 156 0 0 chr18 16577680 16577955 -69410979 + AluSx SINE Alu 6 280 -32 276 30 0 0 chr18 16577956 16577989 -69410945 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 3539 127 28 68 chr18 16577989 16578313 -69410621 + Tigger3b DNA MER2_type 232 520 -2508 760 177 23 0 chr18 16578313 16578443 -69410491 - FLAM_A SINE Alu 0 133 1 3539 127 28 68 chr18 16578443 16578582 -69410352 + Tigger3b DNA MER2_type 520 663 -568 275 192 0 0 chr18 16578640 16578692 -69410242 - AluJb SINE Alu -14 288 237 1520 165 35 93 chr18 16578721 16579255 -69409679 + MER41B LTR ERV1 132 469 -9 1340 197 8 0 chr18 16579259 16579493 -69409441 - AluJb SINE Alu -71 241 6 386 127 55 55 chr18 16579496 16579547 -69409387 + Tigger3b DNA MER2_type 649 699 -2330 1757 160 0 21 chr18 16579547 16579835 -69409099 + AluJo SINE Alu 1 282 -30 386 127 55 55 chr18 16579835 16579893 -69409041 + Tigger3b DNA MER2_type 698 758 -474 1566 190 3 34 chr18 16579906 16580201 -69408733 - AluJb SINE Alu -26 286 1 383 190 40 39 chr18 16580214 16580317 -69408617 - L1ME LINE L1 -344 5777 5702 2040 124 21 0 chr18 16580317 16580608 -69408326 + AluSx SINE Alu 1 297 -15 1934 83 76 0 chr18 16582849 16583136 -69405798 + AluSx SINE Alu 1 307 0 471 152 27 9 chr18 16583333 16583445 -69405489 + GA-rich Low_complexity Low_complexity 3 116 0 216 0 0 0 chr18 16584187 16584211 -69404723 + (TA)n Simple_repeat Simple_repeat 2 25 0 2436 80 3 0 chr18 16584211 16584513 -69404421 - AluSx SINE Alu -9 303 1 266 257 40 0 chr18 16584603 16584677 -69404257 - L1M4 LINE L1 -1545 4601 4525 282 227 76 50 chr18 16584753 16584872 -69404062 - MIR SINE MIR 0 262 141 211 254 0 0 chr18 16584950 16585005 -69403929 + G-rich Low_complexity Low_complexity 4 58 0 1888 143 7 7 chr18 16588238 16588538 -69400396 - AluJb SINE Alu -12 300 1 351 0 0 0 chr18 16588709 16588748 -69400186 + (CA)n Simple_repeat Simple_repeat 2 40 0 1163 198 18 4 chr18 16588899 16589126 -69399808 + AluJo SINE Alu 76 305 -7 2215 73 4 0 chr18 16589147 16589421 -69399513 + AluY SINE Alu 22 296 -15 503 214 0 0 chr18 16589524 16589613 -69399321 + Tigger3(Golem) DNA MER2_type 4 92 -2937 204 190 17 17 chr18 16589615 16589673 -69399261 + T-rich Low_complexity Low_complexity 3 60 0 4316 115 50 34 chr18 16589714 16589963 -69398971 + Tigger3(Golem) DNA MER2_type 2277 2520 -508 2016 147 0 3 chr18 16589963 16590269 -69398665 + AluSx SINE Alu 1 305 -7 4316 115 50 34 chr18 16590269 16590759 -69398175 + Tigger3(Golem) DNA MER2_type 2520 3028 0 439 277 34 0 chr18 16590814 16590962 -69397972 - MIR SINE MIR -28 234 82 1789 148 0 68 chr18 16591031 16591355 -69397579 + AluJo SINE Alu 3 304 -8 2148 117 3 32 chr18 16591677 16591993 -69396941 - AluSx SINE Alu -5 307 1 2284 119 3 0 chr18 16592210 16592521 -69396413 - AluSx SINE Alu 0 312 1 6269 77 14 28 chr18 16593134 16593222 -69395712 + L1PB1 LINE L1 4980 5068 -1083 2614 65 0 0 chr18 16593222 16593530 -69395404 + AluY SINE Alu 1 308 -3 6269 77 14 28 chr18 16593530 16594258 -69394676 + L1PB1 LINE L1 5068 5804 -347 365 86 17 0 chr18 16594258 16594316 -69394618 + (TA)n Simple_repeat Simple_repeat 1 59 0 6269 77 14 28 chr18 16594316 16594559 -69394375 + L1PB1 LINE L1 5804 6022 -129 2129 82 57 0 chr18 16594559 16594839 -69394095 + AluSx SINE Alu 1 296 -16 6269 77 14 28 chr18 16594839 16594966 -69393968 + L1PB1 LINE L1 6022 6149 -2 22 0 0 0 chr18 16594966 16594988 -69393946 + AT_rich Low_complexity Low_complexity 1 22 0 2078 123 0 7 chr18 16595747 16596079 -69392855 + AluSx SINE Alu 1 330 0 191 200 89 0 chr18 16596327 16596372 -69392562 + MIR SINE MIR 204 252 -10 * 243 217 0 0 chr18 16596342 16596388 -69392546 + L2 LINE L2 3227 3272 0 745 197 22 0 chr18 16597125 16597262 -69391672 + AluJo SINE Alu 2 141 -171 2156 111 14 0 chr18 16597262 16597596 -69391338 + AluSx SINE Alu 1 312 0 387 41 0 0 chr18 16597925 16597974 -69390960 + (CA)n Simple_repeat Simple_repeat 1 49 0 403 159 0 0 chr18 16597974 16598037 -69390897 - AluSq SINE Alu -114 199 137 2384 70 0 13 chr18 16599355 16599653 -69389281 + AluY SINE Alu 1 294 -17 2221 124 0 7 chr18 16599662 16599969 -69388965 + AluSx SINE Alu 1 305 -7 345 279 188 13 chr18 16600896 16601050 -69387884 + MER5A DNA MER1_type 9 189 0 324 232 239 32 chr18 16601052 16601243 -69387691 + MIR3 SINE MIR 9 211 -28 2542 68 0 0 chr18 16601589 16601900 -69387034 + AluY SINE Alu 1 311 0 345 346 16 16 chr18 16602162 16602289 -69386645 - MIR SINE MIR -109 153 27 319 206 16 0 chr18 16602343 16602406 -69386528 - MER5B DNA MER1_type 0 178 115 1559 216 27 12 chr18 16602407 16602889 -69386045 + L1ME2 LINE L1 5208 5703 -461 300 243 57 36 chr18 16602895 16603035 -69385899 - MLT1G LTR MaLR 0 590 448 332 171 185 122 chr18 16603073 16603278 -69385656 - MLT1G LTR MaLR -209 346 129 1358 168 94 83 chr18 16603283 16603657 -69385277 - MLT1B LTR MaLR -5 385 8 366 255 69 0 chr18 16603667 16603769 -69385165 - MLT1G LTR MaLR -472 118 10 1570 236 40 20 chr18 16603772 16604216 -69384718 + L1ME2 LINE L1 5705 6157 -7 2075 99 0 57 chr18 16604917 16605231 -69383703 - AluSx SINE Alu -16 296 1 488 283 111 60 chr18 16605277 16605828 -69383106 - L1ME4a LINE L1 0 6121 5543 387 321 151 33 chr18 16606142 16606384 -69382550 - L2 LINE L2 0 3313 3101 2187 135 0 0 chr18 16606384 16606680 -69382254 + AluSx SINE Alu 5 300 -12 387 321 151 33 chr18 16606680 16606920 -69382014 - L2 LINE L2 -212 3101 2688 705 141 0 0 chr18 16606920 16607019 -69381915 + AluJb SINE Alu 191 289 -23 201 231 19 0 chr18 16607023 16607075 -69381859 - L2 LINE L2 -621 2693 2641 2282 259 138 28 chr18 16607091 16608274 -69380660 - L2 LINE L2 -1136 2178 866 1125 286 138 17 chr18 16608265 16608744 -69380190 - L2 LINE L2 -2776 538 2 * 511 265 128 0 chr18 16609013 16609217 -69379717 - HAL1 LINE L1 -861 1646 1417 749 176 10 2 chr18 16609519 16609725 -69379209 - MER8 DNA MER2_type 0 239 1 1179 198 22 0 chr18 16610864 16611096 -69377838 - MLT1D LTR MaLR -268 237 1 187 176 29 0 chr18 16611568 16611602 -69377332 - L2 LINE L2 -14 3299 3265 240 263 0 0 chr18 16612260 16612317 -69376617 + MIR3 SINE MIR 151 207 -1 1079 228 58 69 chr18 16613050 16613449 -69375485 + LTR40a LTR ERVL 1 343 -119 983 154 0 6 chr18 16613458 16613620 -69375314 + FRAM SINE Alu 1 159 -17 2023 121 10 0 chr18 16613821 16614127 -69374807 - AluSx SINE Alu -3 309 1 1840 181 28 43 chr18 16614518 16614916 -69374018 - MLT2C1 LTR ERVL 0 397 6 2122 93 4 0 chr18 16614921 16615222 -69373712 + AluSc SINE Alu 1 302 0 10368 177 56 36 chr18 16615234 16616195 -69372739 - ERVL-C1 LTR ERVL -7 5757 4817 1636 168 0 48 chr18 16616195 16616504 -69372430 - AluJo SINE Alu -18 294 1 10368 177 56 36 chr18 16616504 16617685 -69371249 - ERVL-C1 LTR ERVL -947 4817 3572 * 10435 202 116 77 chr18 16617681 16618126 -69370808 - ERVL-C1 LTR ERVL -2652 3112 2685 1628 196 30 67 chr18 16618126 16618462 -69370472 + MLT1B LTR MaLR 1 321 -69 2089 114 10 0 chr18 16618462 16618760 -69370174 + AluSx SINE Alu 1 301 -11 1628 196 30 67 chr18 16618760 16618826 -69370108 + MLT1B LTR MaLR 321 388 -2 10435 202 116 77 chr18 16618826 16619067 -69369867 - ERVL-C1 LTR ERVL -3079 2685 2455 189 301 9 80 chr18 16619067 16619180 -69369754 + L3 LINE CR1 1460 1564 -13 10435 202 116 77 chr18 16619180 16620258 -69368676 - ERVL-C1 LTR ERVL -3309 2455 1420 183 219 0 24 chr18 16620258 16620299 -69368635 - L2 LINE L2 -40 3273 3234 10435 202 116 77 chr18 16620299 16621356 -69367578 - ERVL-C1 LTR ERVL -4344 1420 20 2197 73 0 10 chr18 16621356 16621657 -69367277 + AluY SINE Alu 1 298 -13 1368 187 36 70 chr18 16621703 16622061 -69366873 - MLT2C2 LTR ERVL 0 464 119 2085 113 0 3 chr18 16622079 16622389 -69366545 - AluSx SINE Alu -3 309 1 860 240 92 62 chr18 16622399 16622703 -69366231 + LTR47B LTR ERVL 31 343 -100 691 146 0 49 chr18 16622738 16622861 -69366073 + LTR47B LTR ERVL 327 443 0 836 122 0 0 chr18 16622861 16622984 -69365950 - MLT2C2 LTR ERVL -341 123 1 809 247 14 22 chr18 16622984 16623207 -69365727 + L1ME3A LINE L1 5948 6168 -2 1801 138 17 10 chr18 16623354 16623644 -69365290 - AluJo SINE Alu -19 293 2 2188 110 0 0 chr18 16623932 16624233 -69364701 - AluSx SINE Alu -11 301 1 287 261 108 23 chr18 16624688 16624818 -69364116 + LTR33A LTR ERVL 329 469 -54 * 376 203 2 2 chr18 16624817 16624907 -69364027 - AluS SINE Alu 0 300 225 801 112 15 37 chr18 16624928 16625062 -69363872 - AluSq/x SINE Alu -181 132 2 4495 143 28 8 chr18 16625062 16625109 -69363825 + L1MC1 LINE L1 5555 5600 -733 1660 140 50 20 chr18 16625109 16625409 -69363525 + AluJb SINE Alu 1 309 -3 4495 143 28 8 chr18 16625409 16626125 -69362809 + L1MC1 LINE L1 5600 6333 0 288 210 25 25 chr18 16626125 16626206 -69362728 - L1MC3 LINE L1 -1755 6030 5950 27 81 0 0 chr18 16626206 16626268 -69362666 + AT_rich Low_complexity Low_complexity 1 62 0 209 354 143 0 chr18 16626583 16626730 -69362204 + L2 LINE L2 202 369 -2945 414 228 11 67 chr18 16627354 16627534 -69361400 + (CGGGG)n Simple_repeat Simple_repeat 5 174 0 2185 67 0 58 chr18 16628479 16628806 -69360128 - AluSg SINE Alu -2 308 1 2573 42 0 3 chr18 16629082 16629393 -69359541 - AluY SINE Alu -1 310 1 1283 193 58 18 chr18 16629397 16629662 -69359272 - L1MB4 LINE L1 -43 6137 5849 1810 156 13 19 chr18 16629662 16629976 -69358958 - AluJb SINE Alu 0 312 1 1283 193 58 18 chr18 16629976 16630044 -69358890 - L1MB4 LINE L1 -331 5849 5785 327 330 119 23 chr18 16630194 16630370 -69358564 - L1MB4 LINE L1 -400 5721 5529 978 145 75 6 chr18 16630466 16630625 -69358309 - FAM SINE Alu -4 171 2 882 246 112 14 chr18 16630660 16630945 -69357989 - MER82 DNA MER2_type 0 653 341 239 182 0 171 chr18 16630987 16631043 -69357891 + L2 LINE L2 3241 3278 -35 2089 108 0 0 chr18 16631043 16631331 -69357603 - AluSx SINE Alu -24 288 1 239 182 0 171 chr18 16631331 16631362 -69357572 + L2 LINE L2 3278 3313 0 2061 106 10 7 chr18 16631868 16632170 -69356764 - AluSx SINE Alu -9 303 1 2729 194 86 73 chr18 16632177 16632412 -69356522 - L1ME1 LINE L1 -18 6148 5917 2272 100 0 0 chr18 16632412 16632722 -69356212 - AluSx SINE Alu -2 310 1 2729 194 86 73 chr18 16632722 16633293 -69355641 - L1ME1 LINE L1 -249 5917 5332 646 204 22 0 chr18 16633307 16633444 -69355490 - L1MB5 LINE L1 -9 6165 6026 1476 212 0 7 chr18 16634114 16634406 -69354528 - AluJb SINE Alu -20 292 3 1093 170 13 13 chr18 16634434 16634658 -69354276 - L1MB7 LINE L1 -16 6168 5945 38 22 0 0 chr18 16635158 16635203 -69353731 + AT_rich Low_complexity Low_complexity 1 45 0 2338 64 7 0 chr18 16635208 16635503 -69353431 + AluY SINE Alu 1 297 -14 415 211 125 39 chr18 16635532 16635636 -69353298 + AluJo SINE Alu 120 232 -70 1644 53 5 5 chr18 16636514 16636721 -69352213 + AluY SINE Alu 89 295 -16 2255 95 0 0 chr18 16636786 16637081 -69351853 + AluSp SINE Alu 1 295 -18 309 311 17 34 chr18 16637118 16637237 -69351697 + MIR3 SINE MIR 66 182 -26 1345 141 38 0 chr18 16637421 16637634 -69351300 - AluJb SINE Alu -77 235 15 4312 160 57 29 chr18 16637655 16637711 -69351223 - L1MB4 LINE L1 0 6180 6127 2165 115 0 6 chr18 16637711 16638025 -69350909 - AluSx SINE Alu 0 312 1 4312 160 57 29 chr18 16638025 16638894 -69350040 - L1MB4 LINE L1 -53 6127 5239 617 126 29 10 chr18 16638894 16638997 -69349937 - MER46A DNA MER2_type -1 235 131 683 104 10 0 chr18 16639023 16639119 -69349815 - AluJ/FLAM SINE Alu -214 98 2 870 194 0 0 chr18 16639120 16639264 -69349670 - MER46A DNA MER2_type -92 144 1 464 194 69 69 chr18 16639123 16639283 -69349651 + MER46A DNA MER2_type 4 163 -73 * 765 183 27 21 chr18 16639283 16639469 -69349465 - L1MB4 LINE L1 -924 5222 5036 292 214 55 76 chr18 16639470 16639615 -69349319 - LTR26 LTR ERV1 0 603 462 816 187 43 16 chr18 16639981 16640168 -69348766 - L1MB4 LINE L1 -1212 4934 4743 4273 148 35 4 chr18 16640441 16641130 -69347804 - MER50 LTR ERV1 -24 710 1 1833 143 3 0 chr18 16641315 16641602 -69347332 - AluSx SINE Alu -21 291 4 1454 166 90 11 chr18 16641753 16642030 -69346904 + AluJo SINE Alu 1 299 -13 1690 166 0 16 chr18 16642095 16642408 -69346526 - AluJo SINE Alu 0 312 5 255 283 208 9 chr18 16642650 16642756 -69346178 - MIR SINE MIR -133 129 3 26 30 0 0 chr18 16642765 16642798 -69346136 + AT_rich Low_complexity Low_complexity 1 33 0 180 179 77 0 chr18 16643152 16643191 -69345743 + L2 LINE L2 110 151 -3163 231 36 0 0 chr18 16643344 16643372 -69345562 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 1833 150 0 0 chr18 16643372 16643652 -69345282 - AluSx SINE Alu -32 280 1 310 248 8 40 chr18 16643676 16643801 -69345133 - L1MC4a LINE L1 -1916 5892 5772 21 0 0 0 chr18 16644013 16644034 -69344900 + AT_rich Low_complexity Low_complexity 1 21 0 272 245 32 90 chr18 16644214 16644273 -69344661 - HAL1b LINE L1 -411 937 876 2091 115 0 10 chr18 16644273 16644578 -69344356 - AluSx SINE Alu -10 302 1 272 245 32 90 chr18 16644578 16644646 -69344288 - HAL1b LINE L1 -472 876 822 2336 75 3 0 chr18 16644646 16644951 -69343983 - AluY SINE Alu -5 306 1 272 245 32 90 chr18 16644951 16645010 -69343924 - HAL1b LINE L1 -526 822 761 329 251 147 21 chr18 16645156 16645347 -69343587 - HAL1 LINE L1 -860 1647 1433 238 249 132 71 chr18 16645708 16645719 -69343215 - HAL1 LINE L1 -1126 1381 1372 2181 103 3 6 chr18 16645719 16646031 -69342903 - AluSx SINE Alu -1 311 1 238 249 132 71 chr18 16646031 16646042 -69342892 - HAL1 LINE L1 -1135 1372 1363 1326 177 57 23 chr18 16646042 16646341 -69342593 - AluJb SINE Alu -3 309 1 238 249 132 71 chr18 16646341 16646735 -69342199 - HAL1 LINE L1 -1144 1363 921 2368 200 82 38 chr18 16646735 16647271 -69341663 + MER82 DNA MER2_type 1 569 -84 2197 110 7 0 chr18 16647271 16647580 -69341354 + AluSx SINE Alu 1 311 -1 2368 200 82 38 chr18 16647580 16647668 -69341266 + MER82 DNA MER2_type 569 652 -1 238 249 132 71 chr18 16647668 16647786 -69341148 - HAL1 LINE L1 -1586 921 812 1857 117 22 0 chr18 16648572 16648846 -69340088 + AluSp SINE Alu 1 280 -33 21 0 0 0 chr18 16648847 16648868 -69340066 + GC_rich Low_complexity Low_complexity 1 21 0 715 124 83 33 chr18 16648922 16649043 -69339891 + FLAM_A SINE Alu 1 127 -6 2208 108 0 0 chr18 16649047 16649342 -69339592 + AluSc SINE Alu 1 295 -14 1088 123 12 0 chr18 16649385 16649547 -69339387 + AluSg/x SINE Alu 137 300 -12 31 26 0 0 chr18 16649608 16649646 -69339288 + AT_rich Low_complexity Low_complexity 1 38 0 1649 162 13 26 chr18 16650051 16650359 -69338575 - AluJo SINE Alu -3 309 6 205 348 0 33 chr18 16650979 16651071 -69337863 - L2 LINE L2 -6 3307 3219 1683 70 0 5 chr18 16651071 16651285 -69337649 + AluSq SINE Alu 82 294 -19 305 284 163 7 chr18 16651409 16651550 -69337384 - L2 LINE L2 -195 3077 2915 360 255 75 78 chr18 16651723 16652017 -69336917 - L2 LINE L2 -649 2665 2373 1485 179 0 8 chr18 16652563 16652820 -69336114 + AluJb SINE Alu 1 255 -57 2256 86 14 0 chr18 16652947 16653239 -69335695 - AluSx SINE Alu -16 296 1 449 322 55 40 chr18 16653358 16653557 -69335377 - MLT1L LTR MaLR -75 540 339 2160 114 0 0 chr18 16653909 16654217 -69334717 - AluSc SINE Alu -1 308 1 347 234 181 32 chr18 16654385 16654564 -69334370 - MIR SINE MIR -56 206 6 2252 103 3 0 chr18 16654621 16654931 -69334003 - AluSp SINE Alu -2 311 1 304 272 143 0 chr18 16655531 16655678 -69333256 - L2 LINE L2 -863 2451 2284 898 217 75 37 chr18 16655689 16656103 -69332831 - MLT1E LTR MaLR -3 590 1 181 217 67 50 chr18 16656151 16656211 -69332723 - MIR SINE MIR -196 66 6 2259 52 3 39 chr18 16656323 16656630 -69332304 + AluY SINE Alu 1 296 -15 242 243 0 14 chr18 16656635 16656705 -69332229 - MER5A DNA MER1_type -83 106 38 2013 93 36 0 chr18 16657083 16657362 -69331572 + AluSq SINE Alu 2 290 -23 1744 173 3 0 chr18 16657467 16657767 -69331167 - AluJo SINE Alu -11 301 1 1188 187 25 125 chr18 16657845 16658278 -69330656 - MLT1B LTR MaLR 0 390 1 6894 53 5 21 chr18 16658707 16659625 -69329309 - SVA Other Other 0 1386 483 1200 84 57 58 chr18 16659739 16660332 -69328602 - SVA Other Other -520 866 433 3951 35 0 214 chr18 16660350 16661159 -69327775 - SVA Other Other -520 866 231 2223 114 0 19 chr18 16661490 16661805 -69327129 - AluSx SINE Alu -3 309 1 213 121 0 0 chr18 16662077 16662110 -69326824 + (TATATG)n Simple_repeat Simple_repeat 6 38 0 23 68 0 0 chr18 16665313 16665357 -69323577 + AT_rich Low_complexity Low_complexity 1 44 0 23 86 0 0 chr18 16666192 16666250 -69322684 + AT_rich Low_complexity Low_complexity 1 58 0 300 321 0 0 chr18 16666367 16666498 -69322436 + T-rich Low_complexity Low_complexity 1 131 0 180 0 0 0 chr18 16666567 16666587 -69322347 + (TCC)n Simple_repeat Simple_repeat 2 21 0 198 0 0 0 chr18 16667192 16667214 -69321720 + (T)n Simple_repeat Simple_repeat 1 22 0 24 0 0 0 chr18 16667285 16667309 -69321625 + AT_rich Low_complexity Low_complexity 1 24 0 1818 147 10 16 chr18 16667834 16668141 -69320793 - AluJo SINE Alu -7 305 1 263 242 158 11 chr18 16668435 16668530 -69320404 - L2 LINE L2 -25 3288 3180 870 241 57 24 chr18 16669008 16669259 -69319675 - MIR SINE MIR -1 261 5 397 154 53 12 chr18 16669843 16670012 -69318922 + (TG)n Simple_repeat Simple_repeat 2 177 0 200 318 131 19 chr18 16672426 16672533 -69316401 + L2 LINE L2 3152 3270 -2 640 145 14 80 chr18 16672981 16673119 -69315815 + MER2 DNA MER2_type 3 131 -214 828 186 13 6 chr18 16673119 16673275 -69315659 - FAM SINE Alu -19 166 10 458 255 117 32 chr18 16673305 16673493 -69315441 + MIR SINE MIR 30 233 -29 187 214 24 24 chr18 16673564 16673606 -69315328 - L2 LINE L2 -49 3223 3182 723 313 147 6 chr18 16673685 16673998 -69314936 - L2 LINE L2 0 3313 2957 260 340 165 5 chr18 16674071 16674283 -69314651 - L2 LINE L2 -548 2766 2521 2662 26 3 13 chr18 16674690 16675000 -69313934 - AluY SINE Alu -4 307 1 2763 264 94 30 chr18 16675153 16676840 -69312094 - L2 LINE L2 0 3313 1513 3318 95 26 51 chr18 16676844 16677350 -69311584 - LTR15 LTR ERV1 0 493 1 2024 147 0 13 chr18 16677361 16677661 -69311273 - AluSx SINE Alu -16 296 1 450 213 195 41 chr18 16678007 16678176 -69310758 + MIR SINE MIR 2 196 -66 377 257 44 0 chr18 16678483 16678596 -69310338 + MER113 DNA MER1_type? 3 120 -401 243 0 0 0 chr18 16679728 16679755 -69309179 + (T)n Simple_repeat Simple_repeat 1 27 0 762 200 0 16 chr18 16679771 16679896 -69309038 - FLAM_C SINE Alu -10 123 1 2234 94 7 0 chr18 16680309 16680597 -69308337 + AluSx SINE Alu 1 290 -22 2054 99 0 57 chr18 16681340 16681654 -69307280 - AluSx SINE Alu -16 296 1 248 265 122 71 chr18 16681700 16682251 -69306683 - L1ME4a LINE L1 0 6121 5543 519 297 173 35 chr18 16682565 16682807 -69306127 - L2 LINE L2 0 3313 3106 2226 134 0 0 chr18 16682807 16683112 -69305822 + AluSx SINE Alu 5 309 -3 519 297 173 35 chr18 16683112 16683344 -69305590 - L2 LINE L2 -207 3106 2688 748 141 0 0 chr18 16683344 16683443 -69305491 + AluJb SINE Alu 191 289 -23 210 250 18 0 chr18 16683443 16683499 -69305435 - L2 LINE L2 -617 2697 2641 2614 257 138 28 chr18 16683515 16684698 -69304236 - L2 LINE L2 -1136 2178 866 1067 288 120 18 chr18 16684710 16685168 -69303766 - L2 LINE L2 -2808 506 2 552 265 128 0 chr18 16685437 16685641 -69303293 - HAL1 LINE L1 -861 1646 1417 752 194 9 1 chr18 16685943 16686149 -69302785 - MER8 DNA MER2_type 0 239 1 1823 154 0 20 chr18 16688339 16688645 -69300289 - AluJb SINE Alu -12 300 1 734 180 0 43 chr18 16688654 16688793 -69300141 - FLAM_A SINE Alu 0 133 1 2151 130 0 0 chr18 16689187 16689480 -69299454 + AluSx SINE Alu 1 293 -19 1491 173 101 0 chr18 16689525 16689802 -69299132 + AluJb SINE Alu 1 305 -7 1394 258 28 80 chr18 16690109 16690201 -69298733 + L1MC1 LINE L1 5112 5207 -1126 2386 81 3 0 chr18 16690201 16690499 -69298435 + AluSp SINE Alu 1 299 -14 1394 258 28 80 chr18 16690499 16691797 -69297137 + L1MC1 LINE L1 5207 6004 -329 3964 166 36 54 chr18 16690501 16690581 -69298353 + L1MB7 LINE L1 5361 5441 -743 2382 104 0 0 chr18 16690581 16690890 -69298044 + AluSx SINE Alu 1 309 -3 3964 166 36 54 chr18 16690890 16691149 -69297785 + L1MB7 LINE L1 5441 5703 -481 1626 147 21 39 chr18 16691149 16691464 -69297470 - AluSx SINE Alu 0 310 1 3964 166 36 54 chr18 16691464 16691936 -69296998 + L1MB7 LINE L1 5703 6159 -25 306 244 179 8 chr18 16691944 16692175 -69296759 - L1MC4 LINE L1 -48 7994 7612 276 321 22 0 chr18 16692277 16692411 -69296523 - L1MC5 LINE L1 -524 7437 7301 269 271 114 14 chr18 16692793 16692933 -69296001 - MLT1K LTR MaLR -53 535 382 319 200 23 123 chr18 16692933 16693063 -69295871 + L2 LINE L2 3191 3307 -6 1105 235 23 5 chr18 16693552 16693769 -69295165 + MER58A DNA MER1_type 1 221 -3 25 31 0 0 chr18 16693857 16693889 -69295045 + AT_rich Low_complexity Low_complexity 1 32 0 2297 111 0 0 chr18 16695384 16695682 -69293252 - AluSx SINE Alu -14 298 1 367 325 27 32 chr18 16695893 16696081 -69292853 - L2 LINE L2 -337 2977 2791 264 211 0 0 chr18 16696138 16696190 -69292744 - MER46C DNA MER2_type -286 52 1 233 372 9 0 chr18 16696194 16696307 -69292627 - L1ME LINE L1 -444 5957 5844 194 150 25 0 chr18 16696413 16696453 -69292481 + CT-rich Low_complexity Low_complexity 3 43 0 1684 262 87 62 chr18 16697154 16698062 -69290872 - L1MC4 LINE L1 -23 8019 7089 22 0 0 0 chr18 16698304 16698326 -69290608 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr18 16699395 16699417 -69289517 + AT_rich Low_complexity Low_complexity 1 22 0 4391 198 38 40 chr18 16699417 16699458 -69289476 - L1MB2 LINE L1 -3 6168 6128 2062 118 38 0 chr18 16699458 16699747 -69289187 - AluSx SINE Alu -12 300 1 4391 198 38 40 chr18 16699747 16701631 -69287303 - L1MB2 LINE L1 -43 6128 4257 3535 229 43 43 chr18 16701601 16702004 -69286930 - L1ME LINE L1 -1086 5060 4658 * 2195 137 0 6 chr18 16702004 16702317 -69286617 - AluSx SINE Alu -1 311 1 3535 229 43 43 chr18 16702317 16703568 -69285366 - L1ME LINE L1 -1488 4658 3442 10866 173 71 37 chr18 16703584 16704088 -69284846 - L1MCa LINE L1 -3452 2974 2488 2228 103 0 0 chr18 16704088 16704397 -69284537 - AluSc SINE Alu 0 309 1 2177 120 0 7 chr18 16704399 16704708 -69284226 - AluSx SINE Alu -5 307 1 10866 173 71 37 chr18 16704708 16704846 -69284088 - L1MCa LINE L1 -3938 2488 2356 1783 170 7 0 chr18 16704846 16705153 -69283781 - AluJo SINE Alu 0 309 1 10866 173 71 37 chr18 16705153 16707365 -69281569 - L1MCa LINE L1 -4070 2356 5 1373 216 71 51 chr18 16707575 16708024 -69280910 - MLT1C LTR MaLR 0 467 10 2336 74 0 0 chr18 16708143 16708456 -69280478 - AluSq SINE Alu 0 313 1 194 296 23 0 chr18 16708486 16708530 -69280404 - MIR SINE MIR -169 93 49 2789 13 0 0 chr18 16710880 16711183 -69277751 - AluYa5 SINE Alu -8 303 1 1314 243 55 82 chr18 16712153 16712766 -69276168 + L1ME3A LINE L1 5521 6117 -53 841 304 89 21 chr18 16712912 16713531 -69275403 + L1MC4a LINE L1 5340 6000 -1808 2332 80 0 38 chr18 16714162 16714475 -69274459 + AluY SINE Alu 1 301 -10 2764 81 0 6 chr18 16714906 16715263 -69273671 - THE1A LTR MaLR 0 355 1 1869 166 0 3 chr18 16715499 16715794 -69273140 + AluJb SINE Alu 1 294 -18 1801 156 14 0 chr18 16717196 16717478 -69271456 - AluJo SINE Alu -14 298 13 625 210 0 0 chr18 16717641 16717760 -69271174 - FLAM_A SINE Alu -10 132 14 425 324 86 8 chr18 16718355 16718554 -69270380 + MIR SINE MIR 45 262 0 2225 97 7 7 chr18 16718809 16719107 -69269827 + AluSx SINE Alu 1 298 -14 190 276 67 52 chr18 16719169 16719303 -69269631 - L2 LINE L2 -330 2942 2807 26 50 0 0 chr18 16720949 16720989 -69267945 + AT_rich Low_complexity Low_complexity 1 40 0 1970 118 43 26 chr18 16721197 16721501 -69267433 - AluSx SINE Alu -3 309 1 498 271 129 17 chr18 16722120 16722553 -69266381 - L1ME3A LINE L1 0 6239 5753 543 250 120 3 chr18 16722586 16722990 -69265944 - L1ME3A LINE L1 -548 5691 5245 1659 266 107 51 chr18 16722990 16723497 -69265437 - L1ME3A LINE L1 -1234 4981 4504 1562 56 47 0 chr18 16723497 16723712 -69265222 - L1MA2 LINE L1 0 6304 6080 1659 266 107 51 chr18 16723712 16724928 -69264006 - L1ME3A LINE L1 -1711 4504 3136 372 293 85 18 chr18 16724996 16725160 -69263774 - L1ME3A LINE L1 -3297 2918 2744 247 283 50 0 chr18 16725241 16725340 -69263594 - L1ME3A LINE L1 -3597 2618 2515 584 248 132 9 chr18 16725399 16725629 -69263305 - L1MEc LINE L1 -3714 2501 2301 2264 131 103 3 chr18 16725629 16726018 -69262916 - MSTA LTR MaLR 0 428 1 584 248 132 9 chr18 16726018 16726221 -69262713 - L1MEc LINE L1 -3914 2301 2062 241 253 116 7 chr18 16726476 16726622 -69262312 - L1MEc LINE L1 -4688 1708 1547 237 269 74 29 chr18 16727145 16727320 -69261614 - L1MEc LINE L1 -5934 271 89 3440 193 41 7 chr18 16727729 16728438 -69260496 + MER44D DNA MER2_type 1 605 0 21 0 0 0 chr18 16729541 16729562 -69259372 + AT_rich Low_complexity Low_complexity 1 21 0 2274 112 0 0 chr18 16730210 16730514 -69258420 - AluSx SINE Alu -8 304 1 250 298 101 18 chr18 16730606 16730834 -69258100 - HAL1b LINE L1 -849 499 253 267 79 0 0 chr18 16730986 16731024 -69257910 + (TG)n Simple_repeat Simple_repeat 1 38 0 2372 82 7 0 chr18 16731173 16731477 -69257457 - AluY SINE Alu -5 306 1 301 221 70 42 chr18 16731630 16731805 -69257129 + MLT1H LTR MaLR 1 140 -409 462 245 141 41 chr18 16731907 16732197 -69256737 - L1ME LINE L1 -297 5824 5506 1686 182 7 7 chr18 16733319 16733626 -69255308 - AluJo SINE Alu -5 307 1 852 131 0 0 chr18 16733638 16733760 -69255174 - FLAM_C SINE Alu -9 124 3 331 351 32 19 chr18 16733761 16733915 -69255019 - L2 LINE L2 -599 2715 2560 300 267 250 0 chr18 16734164 16734280 -69254654 + MIR SINE MIR 7 151 -111 2454 80 0 3 chr18 16734630 16734930 -69254004 + AluSq SINE Alu 1 299 -14 24 32 0 0 chr18 16737565 16737596 -69251338 + AT_rich Low_complexity Low_complexity 1 31 0 24 53 0 0 chr18 16739082 16739120 -69249814 + AT_rich Low_complexity Low_complexity 1 38 0 455 274 29 29 chr18 16739394 16739569 -69249365 + MER5B DNA MER1_type 4 178 0 2807 154 93 20 chr18 16739694 16740254 -69248680 - MER7C DNA MER2_type 0 602 2 1914 169 7 3 chr18 16740279 16740575 -69248359 + AluJo SINE Alu 3 299 -13 2101 136 0 0 chr18 16740674 16740968 -69247966 + AluSx SINE Alu 1 294 -18 742 245 10 16 chr18 16741333 16741525 -69247409 - MER20 DNA MER1_type 0 219 29 357 159 29 14 chr18 16741710 16741779 -69247155 - MER5B DNA MER1_type 0 178 109 335 254 174 35 chr18 16742049 16742222 -69246712 - L1ME LINE L1 -557 5609 5410 7041 123 39 10 chr18 16742236 16743455 -69245479 - L1MA1 LINE L1 -6 6296 5114 2401 90 0 0 chr18 16743455 16743754 -69245180 - AluSg SINE Alu -11 299 1 7041 123 39 10 chr18 16743754 16743966 -69244968 - L1MA1 LINE L1 -1188 5114 4910 2492 67 0 3 chr18 16743966 16744266 -69244668 + AluY SINE Alu 1 299 -12 7041 123 39 10 chr18 16744266 16744813 -69244121 - L1MA1 LINE L1 -1392 4910 4255 432 0 0 0 chr18 16746598 16746646 -69242288 + (TG)n Simple_repeat Simple_repeat 1 48 0 1368 173 53 17 chr18 16746657 16746957 -69241977 - MER2 DNA MER2_type 0 345 35 2213 100 14 0 chr18 16749525 16749815 -69239119 + AluSx SINE Alu 1 294 -18 1521 181 72 23 chr18 16753191 16753539 -69235395 - MLT1A1 LTR MaLR 0 365 1 1147 185 75 90 chr18 16754668 16754931 -69234003 + MSTD LTR MaLR 1 257 -139 2372 72 0 3 chr18 16754931 16755223 -69233711 + AluSc SINE Alu 1 291 -18 1147 185 75 90 chr18 16755223 16755359 -69233575 + MSTD LTR MaLR 257 394 -2 385 299 61 49 chr18 16755375 16755539 -69233395 - MIR SINE MIR -74 188 23 840 210 14 23 chr18 16755596 16755810 -69233124 + MER20 DNA MER1_type 1 212 -7 2140 96 38 0 chr18 16755870 16756161 -69232773 - AluSc SINE Alu -7 302 1 2139 123 3 0 chr18 16756428 16756729 -69232205 - AluSx SINE Alu -10 302 1 1292 139 98 0 chr18 16756889 16757104 -69231830 + MER46A DNA MER2_type 1 236 0 279 255 38 9 chr18 16757431 16757537 -69231397 - L1MC4 LINE L1 -1 8041 7933 24 0 0 0 chr18 16757568 16757592 -69231342 + AT_rich Low_complexity Low_complexity 1 24 0 5626 46 4 0 chr18 16757592 16758272 -69230662 - L1PA7 LINE L1 -11 6143 5461 207 0 0 0 chr18 16758273 16758296 -69230638 + (TTG)n Simple_repeat Simple_repeat 2 24 0 18552 52 13 2 chr18 16758296 16762092 -69226842 - L1PA6 LINE L1 -16 6138 2310 515 266 5 27 chr18 16762560 16762744 -69226190 + AluJb SINE Alu 120 299 -13 375 127 55 55 chr18 16762745 16762803 -69226131 - Tigger3b DNA MER2_type -2271 758 698 1599 167 0 21 chr18 16762803 16763091 -69225843 - AluJo SINE Alu -30 282 1 375 127 55 55 chr18 16763091 16763142 -69225792 - Tigger3b DNA MER2_type -2330 699 649 1253 197 8 0 chr18 16763145 16763379 -69225555 + AluJb SINE Alu 6 241 -71 2658 158 49 32 chr18 16763383 16763903 -69225031 - MER41B LTR ERV1 -9 596 101 320 188 0 0 chr18 16763903 16763967 -69224967 + AluJb SINE Alu 237 300 -2 2450 106 35 60 chr18 16764013 16764152 -69224782 - Tigger3b DNA MER2_type -2365 663 522 760 177 23 0 chr18 16764152 16764282 -69224652 + FLAM_A SINE Alu 1 133 0 2450 106 35 60 chr18 16764282 16764606 -69224328 - Tigger3b DNA MER2_type -2506 522 212 276 30 0 0 chr18 16764606 16764639 -69224295 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 1437 179 11 7 chr18 16764640 16764914 -69224020 - AluSx SINE Alu -32 280 6 1302 190 9 0 chr18 16764915 16765136 -69223798 - Tigger3b DNA MER2_type -1003 228 6 248 0 31 0 chr18 16765153 16765185 -69223749 + (GA)n Simple_repeat Simple_repeat 2 34 0 1321 208 170 43 chr18 16765185 16765584 -69223350 - MLT2B1 LTR ERVL -69 451 2 1857 315 82 58 chr18 16765848 16766096 -69222838 - ERVL LTR ERVL -2620 3144 2903 1903 147 7 0 chr18 16766096 16766403 -69222531 - AluSx SINE Alu -3 309 1 1857 315 82 58 chr18 16766403 16766829 -69222105 - ERVL LTR ERVL -2861 2903 2489 2076 124 0 0 chr18 16766829 16767127 -69221807 - AluSg SINE Alu -12 298 1 183 80 0 0 chr18 16767127 16767152 -69221782 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2240 78 0 0 chr18 16767152 16767435 -69221499 - AluSx SINE Alu -28 284 2 1857 315 82 58 chr18 16767435 16767877 -69221057 - ERVL LTR ERVL -3274 2490 1998 334 301 0 0 chr18 16768006 16768089 -69220845 - ERVL LTR ERVL -3853 1801 1719 508 349 65 11 chr18 16768368 16768643 -69220291 - ERVL LTR ERVL -3659 1337 1048 351 293 38 25 chr18 16769596 16769753 -69219181 - LTR16C LTR ERVL -3 488 330 644 156 8 0 chr18 16769790 16769918 -69219016 + CT-rich Low_complexity Low_complexity 1 129 0 2127 119 0 0 chr18 16769918 16770211 -69218723 - AluSx SINE Alu -19 293 1 1649 152 25 32 chr18 16770268 16770587 -69218347 + AluJb SINE Alu 1 317 0 288 0 0 0 chr18 16770647 16770679 -69218255 + (CGG)n Simple_repeat Simple_repeat 3 34 0 369 212 0 1 chr18 16771926 16771995 -69216939 + AluJ/FLAM SINE Alu 1 62 -240 1873 156 3 0 chr18 16772100 16772401 -69216533 + AluJb SINE Alu 1 302 -10 1153 254 35 71 chr18 16772485 16772879 -69216055 + LTR16C LTR ERVL 112 491 0 251 181 68 105 chr18 16772888 16772956 -69215978 + L1M1 LINE L1 5615 5684 -437 1547 114 34 14 chr18 16772956 16773253 -69215681 + AluSp SINE Alu 1 303 -10 251 181 68 105 chr18 16773253 16773331 -69215603 + L1M1 LINE L1 5684 5755 -366 2279 60 0 0 chr18 16773362 16773668 -69215266 - AluY SINE Alu 0 306 1 307 364 31 52 chr18 16773757 16773992 -69214942 - L2 LINE L2 -710 2604 2375 2235 93 3 0 chr18 16773992 16774293 -69214641 - AluSq SINE Alu -11 302 1 307 364 31 52 chr18 16774293 16774343 -69214591 - L2 LINE L2 -939 2375 2325 234 150 0 0 chr18 16774416 16774456 -69214478 + MLT1D LTR MaLR 466 505 0 810 239 69 62 chr18 16774485 16774774 -69214160 + LTR33 LTR ERVL 231 521 0 1652 163 21 7 chr18 16774902 16775191 -69213743 + AluJo SINE Alu 6 298 -14 691 260 69 10 chr18 16776018 16776341 -69212593 - L1ME LINE L1 -702 5468 5122 987 214 131 48 chr18 16776496 16776908 -69212026 - MLT1C LTR MaLR -16 451 6 381 224 28 37 chr18 16776917 16777024 -69211910 - LTR41 LTR ERVL -328 445 340 890 182 13 0 chr18 16777069 16777228 -69211706 - LTR41 LTR ERVL -612 161 1 997 144 6 6 chr18 16777304 16777464 -69211470 - AluSg/x SINE Alu -16 296 137 1479 165 84 0 chr18 16777464 16777725 -69211209 - AluSg SINE Alu -21 289 7 2606 26 0 0 chr18 16777736 16778040 -69210894 - AluY SINE Alu -7 304 1 24 0 0 0 chr18 16778399 16778423 -69210511 + AT_rich Low_complexity Low_complexity 1 24 0 792 188 27 116 chr18 16778451 16778744 -69210190 - L1ME3 LINE L1 -3 6159 5893 312 260 120 108 chr18 16778749 16779001 -69209933 - L1ME LINE L1 -1228 4918 4659 1611 239 75 64 chr18 16779002 16779475 -69209459 - L1M4 LINE L1 -1328 4818 4352 2062 84 42 0 chr18 16779475 16779760 -69209174 + AluY SINE Alu 2 298 -13 1611 239 75 64 chr18 16779760 16779827 -69209107 - L1M4 LINE L1 -1794 4352 4287 873 154 0 0 chr18 16779827 16779957 -69208977 - FLAM_C SINE Alu -3 130 1 1611 239 75 64 chr18 16779957 16780161 -69208773 - L1M4 LINE L1 -1859 4287 4065 1794 251 114 6 chr18 16780165 16780715 -69208219 + L1ME3A LINE L1 5556 6165 -5 1442 201 42 45 chr18 16780885 16781244 -69207690 - MLT1A1 LTR MaLR -5 360 3 617 262 17 12 chr18 16781934 16782106 -69206828 - MER5A DNA MER1_type 0 189 17 679 218 90 0 chr18 16782595 16782751 -69206183 + MER3 DNA MER1_type 1 123 -86 243 200 0 38 chr18 16783366 16783446 -69205488 + (CCCCG)n Simple_repeat Simple_repeat 5 81 0 22 0 0 0 chr18 16783889 16783911 -69205023 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr18 16784051 16784082 -69204852 + GC_rich Low_complexity Low_complexity 1 31 0 23 33 0 0 chr18 16784194 16784224 -69204710 + GC_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr18 16784273 16784294 -69204640 + GC_rich Low_complexity Low_complexity 1 21 0 423 264 176 8 chr18 16784520 16784759 -69204175 - L1ME2 LINE L1 -9 6155 5877 201 372 16 0 chr18 16785666 16785787 -69203147 - L2 LINE L2 0 3313 3191 218 230 264 0 chr18 16785827 16785914 -69203020 - L2 LINE L2 0 3272 3163 1996 112 7 7 chr18 16786334 16786621 -69202313 - AluSx SINE Alu -17 295 9 243 338 91 7 chr18 16786628 16786782 -69202152 - L2 LINE L2 -595 2719 2553 698 302 184 22 chr18 16786827 16787366 -69201568 - L2 LINE L2 -955 2359 1734 349 292 151 53 chr18 16787362 16787695 -69201239 + L2 LINE L2 2701 3068 -204 * 289 258 16 0 chr18 16788245 16788307 -69200627 + L2 LINE L2 3249 3311 -2 220 316 75 30 chr18 16788334 16788467 -69200467 - L2 LINE L2 -1638 1676 1538 868 219 12 0 chr18 16788479 16788648 -69200286 + AluJb SINE Alu 135 305 -7 660 156 15 67 chr18 16788905 16789040 -69199894 - FRAM SINE Alu -7 169 42 2101 100 0 17 chr18 16789097 16789397 -69199537 - AluSx SINE Alu -17 295 1 1525 168 75 7 chr18 16789400 16789727 -69199207 - AluJb SINE Alu 0 347 1 2197 71 6 59 chr18 16789728 16790052 -69198882 - AluY SINE Alu -4 307 1 276 312 88 16 chr18 16790501 16790626 -69198308 + L2 LINE L2 3138 3271 -1 401 280 126 7 chr18 16790639 16790782 -69198152 - MIR3 SINE MIR -14 194 35 1273 167 40 57 chr18 16791303 16791603 -69197331 - AluJo SINE Alu -17 295 1 593 108 0 0 chr18 16791614 16791697 -69197237 - AluJo SINE Alu -9 303 221 * 812 182 81 0 chr18 16791696 16791844 -69197090 - AluJo SINE Alu -151 161 2 7381 24 0 334 chr18 16792455 16794536 -69194398 - SVA Other Other 0 1386 1 2207 107 0 0 chr18 16794544 16794843 -69194091 - AluSx SINE Alu -13 299 1 268 81 27 0 chr18 16795194 16795231 -69193703 + Alu SINE Alu 1 38 -261 1906 137 19 3 chr18 16795703 16796010 -69192924 - AluSx SINE Alu 0 312 1 462 261 150 39 chr18 16796010 16796316 -69192618 + L1MC4a LINE L1 4963 5302 -844 526 261 153 5 chr18 16796319 16796709 -69192225 + L1MC4a LINE L1 5356 5923 -1885 21 57 0 0 chr18 16796930 16796965 -69191969 + AT_rich Low_complexity Low_complexity 1 35 0 2377 63 0 3 chr18 16796974 16797274 -69191660 + AluY SINE Alu 2 300 -11 333 0 0 0 chr18 16797282 16797319 -69191615 + (TC)n Simple_repeat Simple_repeat 2 38 0 * 1107 123 0 0 chr18 16797318 16797523 -69191411 + (TA)n Simple_repeat Simple_repeat 1 205 0 25 51 0 0 chr18 16798217 16798256 -69190678 + AT_rich Low_complexity Low_complexity 1 39 0 1482 183 56 0 chr18 16798325 16798610 -69190324 + AluJo SINE Alu 3 303 -9 1907 140 7 0 chr18 16798616 16798916 -69190018 - AluSx SINE Alu -10 302 1 490 104 0 0 chr18 16798981 16799048 -69189886 + AluS SINE Alu 1 67 -245 * 623 82 0 12 chr18 16799046 16799131 -69189803 - AluY SINE Alu -226 85 2 1964 108 0 38 chr18 16799236 16799551 -69189383 + AluSx SINE Alu 9 311 -1 1475 177 0 18 chr18 16800430 16800748 -69188186 - AluJo SINE Alu 0 317 5 236 284 202 18 chr18 16800987 16801096 -69187838 - MIR SINE MIR -131 131 3 26 30 0 0 chr18 16801105 16801138 -69187796 + AT_rich Low_complexity Low_complexity 1 33 0 180 179 77 0 chr18 16801492 16801531 -69187403 + L2 LINE L2 110 151 -3163 231 36 0 0 chr18 16801683 16801711 -69187223 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 1833 150 0 0 chr18 16801711 16801991 -69186943 - AluSx SINE Alu -32 280 1 310 248 8 40 chr18 16802015 16802140 -69186794 - L1MC4a LINE L1 -1916 5892 5772 21 0 0 0 chr18 16802352 16802373 -69186561 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr18 16802533 16802564 -69186370 + AT_rich Low_complexity Low_complexity 1 31 0 1929 108 0 41 chr18 16802781 16803097 -69185837 + AluSx SINE Alu 9 311 -1 1355 132 11 95 chr18 16803976 16804284 -69184650 - AluJb SINE Alu 0 317 33 2071 93 19 16 chr18 16804293 16804603 -69184331 - AluY SINE Alu 0 311 1 2437 171 115 14 chr18 16804603 16804848 -69184086 - L1MB7 LINE L1 -22 6162 5943 396 0 0 0 chr18 16804848 16804892 -69184042 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 2271 53 4 0 chr18 16804892 16805173 -69183761 - AluY SINE Alu -29 282 1 2437 171 115 14 chr18 16805173 16805483 -69183451 - L1MB7 LINE L1 -240 5944 5550 1277 124 52 71 chr18 16805491 16805758 -69183176 - AluSx SINE Alu -5 307 46 792 128 0 0 chr18 16805759 16805868 -69183066 - AluSq/x SINE Alu -203 110 2 1510 183 48 7 chr18 16805875 16806165 -69182769 - AluJb SINE Alu -10 302 1 2160 93 0 13 chr18 16806630 16806930 -69182004 + AluSc SINE Alu 1 296 -13 431 259 52 46 chr18 16807258 16807432 -69181502 - L1ME LINE L1 -302 5819 5645 23 33 0 0 chr18 16807479 16807509 -69181425 + AT_rich Low_complexity Low_complexity 1 30 0 1059 128 10 82 chr18 16807630 16807826 -69181108 + MER20 DNA MER1_type 38 219 0 1435 188 24 24 chr18 16807856 16808148 -69180786 - AluJo SINE Alu -18 294 3 390 296 103 62 chr18 16808402 16808869 -69180065 - MLT1J LTR MaLR 0 511 26 2285 112 0 0 chr18 16808869 16809181 -69179753 + AluSx SINE Alu 1 312 0 381 334 157 30 chr18 16809755 16810060 -69178874 + L1 LINE L1 4627 4970 -1176 710 161 8 0 chr18 16810201 16810325 -69178609 + FLAM_C SINE Alu 13 137 -6 1709 102 0 31 chr18 16810602 16810717 -69178217 - AluSq SINE Alu -65 248 131 1979 115 27 0 chr18 16810717 16811013 -69177921 - AluSg SINE Alu -6 304 1 2028 110 7 16 chr18 16811016 16811324 -69177610 - AluSx SINE Alu -7 305 1 1709 102 0 31 chr18 16811324 16811413 -69177521 - AluSq SINE Alu -183 130 2 323 87 0 0 chr18 16811413 16811459 -69177475 - Alu SINE Alu -255 47 2 643 286 46 21 chr18 16811756 16811994 -69176940 + MIR SINE MIR 2 245 -17 21 36 0 0 chr18 16812047 16812075 -69176859 + AT_rich Low_complexity Low_complexity 1 28 0 319 268 120 35 chr18 16812271 16812413 -69176521 - L1ME4a LINE L1 -4 6117 5964 21 0 0 0 chr18 16812627 16812648 -69176286 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 16812760 16812788 -69176146 + AT_rich Low_complexity Low_complexity 1 28 0 1420 176 72 32 chr18 16813794 16814140 -69174794 - L1MD2 LINE L1 -1 6358 5999 2276 110 0 3 chr18 16814251 16814552 -69174382 - AluSx SINE Alu -12 300 1 1491 122 0 0 chr18 16816265 16816461 -69172473 - AluSx SINE Alu -116 196 1 1971 160 0 3 chr18 16816941 16817253 -69171681 - AluJb SINE Alu -1 311 1 190 410 42 0 chr18 16817531 16817675 -69171259 + L2 LINE L2 2826 2975 -338 1514 158 72 32 chr18 16817889 16818167 -69170767 + AluJo SINE Alu 1 289 -23 185 333 0 0 chr18 16818215 16818263 -69170671 - L2 LINE L2 -9 3263 3216 884 209 19 0 chr18 16818650 16818808 -69170126 + FRAM SINE Alu 1 161 -5 351 0 0 0 chr18 16819099 16819138 -69169796 + (TG)n Simple_repeat Simple_repeat 2 40 0 1489 160 11 14 chr18 16819152 16819433 -69169501 - L1MB1 LINE L1 -44 6124 5845 638 287 121 39 chr18 16819674 16819815 -69169119 + L1M4 LINE L1 2447 2575 -3571 2878 13 0 0 chr18 16819815 16820132 -69168802 - AluYb8 SINE Alu -1 317 1 638 287 121 39 chr18 16820132 16820290 -69168644 + L1M4 LINE L1 2575 2719 -3427 2432 85 0 0 chr18 16820290 16820585 -69168349 + AluSp SINE Alu 1 295 -18 638 287 121 39 chr18 16820585 16820824 -69168110 + L1M4 LINE L1 2719 2937 -3209 2046 131 10 3 chr18 16820824 16821121 -69167813 - AluSx SINE Alu -13 299 1 638 287 121 39 chr18 16821121 16821592 -69167342 + L1M4 LINE L1 2937 3541 -2605 907 258 60 73 chr18 16821614 16821742 -69167192 + L1M4 LINE L1 3716 3844 -2302 2281 116 0 0 chr18 16821742 16822053 -69166881 - AluSq SINE Alu -2 311 1 907 258 60 73 chr18 16822053 16822420 -69166514 + L1M4 LINE L1 3844 4205 -1941 802 229 88 36 chr18 16822500 16822986 -69165948 - MLT1G3 LTR MaLR -8 534 1 27 0 0 0 chr18 16823397 16823424 -69165510 + AT_rich Low_complexity Low_complexity 1 27 0 1886 100 85 21 chr18 16823431 16823712 -69165222 + AluSq SINE Alu 1 299 -14 584 321 93 35 chr18 16823825 16824168 -69164766 + L3 LINE CR1 1190 1552 -25 1569 246 65 13 chr18 16824445 16824981 -69163953 + L1MC4 LINE L1 6544 7144 -898 996 235 50 32 chr18 16824981 16825322 -69163612 + L1MC4a LINE L1 7137 7483 -325 382 250 137 10 chr18 16825341 16825545 -69163389 + L1MC4 LINE L1 7672 7901 -141 21 71 0 0 chr18 16825573 16825615 -69163319 + AT_rich Low_complexity Low_complexity 1 42 0 3278 212 111 31 chr18 16825621 16827561 -69161373 + L1MD2 LINE L1 4120 6223 -136 508 271 106 58 chr18 16828622 16828951 -69159983 + L2 LINE L2 2828 3172 -141 2440 78 3 0 chr18 16829124 16829420 -69159514 + AluSp SINE Alu 2 298 -15 185 296 227 11 chr18 16829761 16829849 -69159085 + L2 LINE L2 2499 2605 -709 260 272 32 13 chr18 16832298 16832456 -69156478 + T-rich Low_complexity Low_complexity 5 165 0 311 262 103 0 chr18 16835403 16835529 -69153405 + L1M LINE L1 5280 5418 -752 2170 96 14 0 chr18 16835653 16835945 -69152989 + AluSq SINE Alu 1 296 -17 1160 208 0 71 chr18 16836189 16836444 -69152490 - MER8 DNA MER2_type -1 238 2 257 224 200 96 chr18 16836724 16836849 -69152085 - L2 LINE L2 0 3313 3176 340 269 28 28 chr18 16836874 16836982 -69151952 - MIR SINE MIR -56 206 99 2274 116 0 0 chr18 16836982 16837283 -69151651 - AluSx SINE Alu -11 301 1 2138 93 0 7 chr18 16838238 16838517 -69150417 + AluSx SINE Alu 1 277 -35 264 333 14 0 chr18 16838834 16838903 -69150031 - L2 LINE L2 -1 3271 3202 2033 131 14 0 chr18 16838911 16839202 -69149732 + AluSx SINE Alu 1 295 -17 253 344 66 8 chr18 16839999 16840121 -69148813 + LTR67 LTR ERVL 429 557 0 1985 104 63 0 chr18 16840895 16841164 -69147770 + AluSx SINE Alu 1 286 -26 413 113 0 0 chr18 16841165 16841227 -69147707 + Alu SINE Alu 241 302 -10 386 238 30 74 chr18 16841361 16841563 -69147371 - L1MC5 LINE L1 -614 7347 7155 799 243 26 80 chr18 16841722 16841804 -69147130 - L1MC5 LINE L1 -1016 6792 6707 2013 110 41 10 chr18 16841804 16842095 -69146839 - AluSx SINE Alu -12 300 1 799 243 26 80 chr18 16842095 16842131 -69146803 - L1MC5 LINE L1 -1101 6707 6671 2181 119 3 0 chr18 16842131 16842424 -69146510 + AluJb SINE Alu 1 294 -18 799 243 26 80 chr18 16842424 16842767 -69146167 - L1MC5 LINE L1 -1137 6671 6476 312 292 59 71 chr18 16843044 16843619 -69145315 - HAL1b LINE L1 -715 633 66 21 0 0 0 chr18 16843621 16843642 -69145292 + AT_rich Low_complexity Low_complexity 1 21 0 1609 163 42 17 chr18 16843644 16843933 -69145001 + AluJb SINE Alu 1 296 -16 2475 68 0 0 chr18 16843971 16844267 -69144667 - AluY SINE Alu -15 296 1 21 0 0 0 chr18 16844375 16844396 -69144538 + AT_rich Low_complexity Low_complexity 1 21 0 2250 115 0 0 chr18 16844460 16844756 -69144178 + AluSx SINE Alu 1 296 -16 279 308 145 0 chr18 16844758 16844875 -69144059 + L1ME1 LINE L1 5945 6078 -88 2179 106 0 0 chr18 16844927 16845209 -69143725 - AluSx SINE Alu -30 282 1 445 299 111 14 chr18 16845769 16845986 -69142948 + MIR SINE MIR 10 247 -15 195 129 0 0 chr18 16846129 16846160 -69142774 + (CATA)n Simple_repeat Simple_repeat 4 34 0 258 95 0 0 chr18 16846198 16846240 -69142694 + (TTGG)n Simple_repeat Simple_repeat 2 43 0 1647 168 21 21 chr18 16846240 16846526 -69142408 - AluJo SINE Alu -26 286 1 188 274 9 94 chr18 16847514 16847620 -69141314 - MIR SINE MIR -100 162 66 2161 125 0 3 chr18 16847649 16847938 -69140996 - AluSx SINE Alu -24 288 1 671 215 34 62 chr18 16848273 16848450 -69140484 + MIR SINE MIR 31 202 -60 247 284 126 38 chr18 16849405 16849588 -69139346 + L2 LINE L2 2665 2863 -451 196 354 61 24 chr18 16849906 16849988 -69138946 - L2 LINE L2 -2973 341 257 508 285 20 7 chr18 16850011 16850162 -69138772 - MIR SINE MIR 0 262 110 731 200 40 38 chr18 16851679 16851988 -69136946 - L1ME1 LINE L1 -23 6143 5842 2331 100 0 0 chr18 16852218 16852518 -69136416 - AluSp SINE Alu -13 300 1 2372 78 0 7 chr18 16853174 16853469 -69135465 - AluSq SINE Alu -19 294 2 759 226 157 0 chr18 16853552 16853769 -69135165 + MIR SINE MIR 12 262 0 507 270 20 7 chr18 16854507 16854655 -69134279 + MIR SINE MIR 113 262 0 1718 172 34 20 chr18 16855010 16855306 -69133628 - AluJb SINE Alu -11 301 2 2173 96 0 0 chr18 16855878 16856189 -69132745 - AluSc SINE Alu 0 319 9 1861 134 33 0 chr18 16856192 16856518 -69132416 - AluSx SINE Alu 0 335 1 308 234 13 13 chr18 16856655 16856732 -69132202 - MLT1L LTR MaLR -390 225 149 402 180 40 40 chr18 16858611 16858711 -69130223 - L1MCa LINE L1 -3948 2478 2379 2193 111 7 0 chr18 16858712 16859010 -69129924 - AluSq SINE Alu -13 300 1 639 249 47 75 chr18 16860111 16860324 -69128610 + MIR SINE MIR 39 245 -17 1025 175 11 11 chr18 16860711 16860888 -69128046 + AluJo SINE Alu 127 303 -9 1489 98 5 0 chr18 16860954 16861147 -69127787 - AluSp SINE Alu -20 293 100 2077 125 4 0 chr18 16861147 16861428 -69127506 - AluSx SINE Alu -29 283 2 180 310 130 0 chr18 16862027 16862127 -69126807 - MIR SINE MIR -30 232 120 2177 83 10 17 chr18 16862545 16862833 -69126101 - AluSc SINE Alu -23 286 1 1109 107 65 0 chr18 16862833 16863002 -69125932 - L1MA6 LINE L1 -1 6299 6120 21 0 0 0 chr18 16863005 16863026 -69125908 + AT_rich Low_complexity Low_complexity 1 21 0 232 59 59 0 chr18 16863074 16863108 -69125826 + L1MA6 LINE L1 6119 6154 -146 1718 176 3 14 chr18 16863134 16863423 -69125511 - AluJb SINE Alu -22 290 5 1379 179 123 3 chr18 16863425 16863733 -69125201 - L1MA6 LINE L1 -173 6127 5783 6384 116 95 90 chr18 16863833 16865138 -69123796 + pTR5 LTR ERV1 1127 2438 0 332 185 143 0 chr18 16865213 16865332 -69123602 + L1MB3 LINE L1 6041 6176 -7 23 0 0 0 chr18 16865502 16865525 -69123409 + AT_rich Low_complexity Low_complexity 1 23 0 1613 212 51 15 chr18 16865628 16866039 -69122895 + L1MC3 LINE L1 7352 7777 -8 246 257 118 15 chr18 16866054 16866190 -69122744 + HAL1b LINE L1 89 238 -1110 284 155 31 93 chr18 16866224 16866321 -69122613 - FRAM SINE Alu -8 158 68 2111 138 0 0 chr18 16866374 16866686 -69122248 - AluSx SINE Alu 0 312 1 481 291 46 52 chr18 16866998 16867393 -69121541 - L1MC5 LINE L1 -384 7577 7235 503 212 53 132 chr18 16867438 16867562 -69121372 - L1MC5 LINE L1 -733 7228 7096 1791 141 7 14 chr18 16867562 16867852 -69121082 + AluJo SINE Alu 1 288 -24 503 212 53 132 chr18 16867852 16867998 -69120936 - L1MC5 LINE L1 -865 7096 6993 2236 89 7 0 chr18 16867998 16868324 -69120610 - AluSx SINE Alu 0 328 1 503 212 53 132 chr18 16868324 16868429 -69120505 - L1MC5 LINE L1 -968 6993 6881 198 0 0 0 chr18 16868832 16868854 -69120080 + (TCCA)n Simple_repeat Simple_repeat 1 22 0 2079 72 65 0 chr18 16869253 16869530 -69119404 + AluSg SINE Alu 1 295 -15 4937 288 73 29 chr18 16870088 16872978 -69115956 - HERVL-F LTR ERVL -2036 3618 443 340 235 8 84 chr18 16872955 16872985 -69115949 - HERVL-F LTR ERVL -5624 140 109 * 1719 169 10 7 chr18 16872985 16873280 -69115654 - AluJb SINE Alu -16 296 1 340 235 8 84 chr18 16873280 16873368 -69115566 - HERVL-F LTR ERVL -5655 109 31 438 191 0 103 chr18 16873402 16873538 -69115396 - MLT2F LTR ERVL -2 661 540 446 248 89 5 chr18 16873632 16873924 -69115010 - MLT2F LTR ERVL -300 363 1 2275 94 0 16 chr18 16874503 16874812 -69114122 + AluSp SINE Alu 1 304 -9 1036 236 26 66 chr18 16875333 16875681 -69113253 - MLT1A2 LTR MaLR -1 373 40 450 272 3 5 chr18 16875894 16876018 -69112916 + L1ME3 LINE L1 6037 6159 -11 2089 111 7 0 chr18 16876028 16876332 -69112602 - AluSp SINE Alu 0 306 1 2009 147 171 8 chr18 16876361 16876729 -69112205 - MSTA LTR MaLR 0 428 1 246 32 0 0 chr18 16877067 16877098 -69111836 + (T)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr18 16877108 16877129 -69111805 + AT_rich Low_complexity Low_complexity 1 21 0 1748 110 4 0 chr18 16877252 16877489 -69111445 - AluSq SINE Alu -75 238 1 704 249 78 87 chr18 16877499 16877856 -69111078 + L1M4 LINE L1 3852 4205 -1941 896 233 80 29 chr18 16877936 16878422 -69110512 - MLT1G3 LTR MaLR -8 534 1 27 0 0 0 chr18 16878833 16878860 -69110074 + AT_rich Low_complexity Low_complexity 1 27 0 1937 99 82 18 chr18 16878867 16879149 -69109785 + AluSq SINE Alu 1 300 -13 560 321 93 35 chr18 16879262 16879605 -69109329 + L3 LINE CR1 1190 1552 -25 1369 247 137 43 chr18 16879884 16881045 -69107889 + L1MD3 LINE L1 6544 7995 0 3698 211 111 31 chr18 16881061 16883001 -69105933 + L1MD2 LINE L1 4120 6223 -136 509 271 106 58 chr18 16884062 16884391 -69104543 + L2 LINE L2 2828 3172 -141 2426 78 3 0 chr18 16884564 16884858 -69104076 + AluSp SINE Alu 2 296 -17 186 296 227 11 chr18 16885199 16885287 -69103647 + L2 LINE L2 2499 2605 -709 260 272 32 13 chr18 16887735 16887893 -69101041 + T-rich Low_complexity Low_complexity 5 165 0 229 208 138 39 chr18 16890836 16890966 -69097968 + L1M LINE L1 5276 5418 -762 2209 110 0 13 chr18 16891090 16891390 -69097544 + AluSx SINE Alu 1 296 -16 2234 94 7 0 chr18 16892133 16892421 -69096513 - AluSx SINE Alu -22 290 1 717 200 0 24 chr18 16892834 16892959 -69095975 + FLAM_C SINE Alu 1 122 -11 198 0 0 0 chr18 16892975 16892997 -69095937 + (A)n Simple_repeat Simple_repeat 1 22 0 44 0 0 0 chr18 16893123 16893167 -69095767 + AT_rich Low_complexity Low_complexity 1 44 0 13745 167 109 20 chr18 16893167 16894808 -69094126 - L1M2 LINE L1 -519 7200 5706 2277 92 31 0 chr18 16894808 16895100 -69093834 + AluSc SINE Alu 1 301 -8 13745 167 109 20 chr18 16895100 16895264 -69093670 - L1M2 LINE L1 -2013 5706 5558 2243 118 0 0 chr18 16895264 16895561 -69093373 - AluSx SINE Alu -15 297 1 13745 167 109 20 chr18 16895561 16896416 -69092518 - L1M2 LINE L1 -2161 5558 4780 1777 140 61 0 chr18 16896416 16896709 -69092225 - AluSx SINE Alu -1 311 1 13745 167 109 20 chr18 16896709 16898238 -69090696 - L1M2 LINE L1 -2939 4780 2638 22 35 0 0 chr18 16898380 16898409 -69090525 + AT_rich Low_complexity Low_complexity 1 29 0 25 65 0 0 chr18 16898501 16898547 -69090387 + AT_rich Low_complexity Low_complexity 1 46 0 26 0 0 0 chr18 16898801 16898827 -69090107 + AT_rich Low_complexity Low_complexity 1 26 0 1794 166 0 3 chr18 16898882 16899171 -69089763 + AluJb SINE Alu 17 304 -8 1852 115 31 4 chr18 16899243 16899504 -69089430 - AluSx SINE Alu -44 268 1 1435 117 41 160 chr18 16900804 16901147 -69087787 + AluYb8 SINE Alu 1 302 -6 2385 101 0 0 chr18 16901292 16901599 -69087335 - AluSg SINE Alu -3 307 1 287 252 138 0 chr18 16901682 16901805 -69087129 - MER112 DNA MER1_type 0 260 121 4643 77 9 40 chr18 16901813 16902488 -69086446 + L1PA13 LINE L1 5490 6143 -20 215 256 26 13 chr18 16902496 16902574 -69086360 + (TATG)n Simple_repeat Simple_repeat 4 82 0 1409 175 36 4 chr18 16902713 16902965 -69085969 + AluJb SINE Alu 4 263 -49 1070 144 24 5 chr18 16904051 16904238 -69084696 - L1ME LINE L1 -469 5700 5515 714 194 21 0 chr18 16904325 16904469 -69084465 - L1MB7 LINE L1 0 6184 6038 568 255 28 28 chr18 16904493 16904705 -69084229 - L1MC4 LINE L1 -369 7673 7462 363 222 0 14 chr18 16904983 16905055 -69083879 - FLAM SINE Alu -10 123 53 2132 107 4 7 chr18 16905141 16905422 -69083512 + AluSx SINE Alu 1 280 -32 2011 141 0 3 chr18 16905813 16906103 -69082831 + AluSx SINE Alu 1 289 -23 2348 102 0 0 chr18 16907845 16908148 -69080786 + AluSx SINE Alu 1 303 -9 2401 91 0 0 chr18 16908155 16908452 -69080482 + AluSc SINE Alu 1 297 -12 373 231 48 19 chr18 16910088 16910192 -69078742 - MIR SINE MIR -6 256 150 1502 137 74 33 chr18 16910512 16910782 -69078152 + AluJo SINE Alu 2 282 -30 216 67 0 0 chr18 16910796 16910826 -69078108 + (TC)n Simple_repeat Simple_repeat 1 30 0 294 143 0 0 chr18 16910829 16910878 -69078056 + (CATA)n Simple_repeat Simple_repeat 2 50 0 40 59 0 0 chr18 16910883 16910951 -69077983 + AT_rich Low_complexity Low_complexity 1 68 0 933 119 7 21 chr18 16912162 16912305 -69076629 + FLAM_C SINE Alu 1 141 -2 557 219 78 1 chr18 16913284 16913435 -69075499 - MIR SINE MIR -56 152 32 1888 89 8 12 chr18 16915359 16915607 -69073327 + AluSq SINE Alu 46 292 -21 2148 105 0 0 chr18 16915855 16916140 -69072794 + AluSc SINE Alu 1 285 -24 303 312 251 10 chr18 16916372 16916981 -69071953 + L2 LINE L2 1770 2525 -789 1289 115 71 53 chr18 16917024 16917250 -69071684 - MER30 DNA MER1_type 0 230 1 275 422 20 7 chr18 16917500 16917647 -69071287 - L2 LINE L2 -2 3270 3122 1196 224 80 42 chr18 16918347 16918772 -69070162 - MLT2B2 LTR ERVL 0 515 75 332 194 0 0 chr18 16918868 16918935 -69069999 - MLT2B2 LTR ERVL -487 67 1 2230 116 0 3 chr18 16919386 16919687 -69069247 + AluSq SINE Alu 1 300 -13 274 206 0 103 chr18 16919793 16919861 -69069073 - MER2 DNA MER2_type 0 345 285 2267 77 0 74 chr18 16919913 16920250 -69068684 + AluSx SINE Alu 1 312 0 180 0 0 0 chr18 16920258 16920278 -69068656 + (G)n Simple_repeat Simple_repeat 1 20 0 953 95 32 0 chr18 16920378 16920504 -69068430 - AluSp SINE Alu -183 130 1 338 254 140 57 chr18 16921289 16921407 -69067527 + HAL1 LINE L1 812 919 -1588 2562 197 83 40 chr18 16921407 16921495 -69067439 - MER82 DNA MER2_type -1 652 569 2156 126 7 0 chr18 16921495 16921804 -69067130 - AluSx SINE Alu -1 311 1 2562 197 83 40 chr18 16921804 16922340 -69066594 - MER82 DNA MER2_type -84 569 1 338 254 140 57 chr18 16922340 16922729 -69066205 + HAL1 LINE L1 919 1361 -1146 1421 174 57 23 chr18 16922734 16923033 -69065901 + AluJb SINE Alu 1 309 -3 2227 110 3 0 chr18 16923044 16923343 -69065591 + AluSx SINE Alu 1 300 -12 31 26 0 0 chr18 16923403 16923441 -69065493 + AT_rich Low_complexity Low_complexity 1 38 0 1754 162 13 26 chr18 16923846 16924154 -69064780 - AluJo SINE Alu -3 309 6 1263 125 0 24 chr18 16924874 16925110 -69063824 + AluSq SINE Alu 83 313 0 1373 216 71 51 chr18 16925229 16925678 -69063256 + MLT1C LTR MaLR 10 467 0 10866 179 68 37 chr18 16925888 16928100 -69060834 + L1MCa LINE L1 5 2145 -4281 1784 170 7 0 chr18 16928100 16928407 -69060527 + AluJo SINE Alu 1 309 0 10866 179 68 37 chr18 16928407 16928545 -69060389 + L1MCa LINE L1 2145 2277 -4149 2177 120 0 7 chr18 16928545 16928854 -69060080 + AluSx SINE Alu 1 307 -5 2229 103 0 0 chr18 16928856 16929165 -69059769 + AluSc SINE Alu 1 309 0 10866 179 68 37 chr18 16929165 16929669 -69059265 + L1MCa LINE L1 2277 2974 -3452 822 261 43 11 chr18 16929685 16929965 -69058969 + L1MCa LINE L1 3722 4010 -2416 15245 111 18 16 chr18 16930130 16932434 -69056500 - L1P LINE L1 -3825 2321 12 8996 86 27 9 chr18 16932439 16932495 -69056439 - L1P3 LINE L1 -671 5798 5744 2105 100 0 45 chr18 16932495 16932804 -69056130 - AluSc SINE Alu -14 295 1 8996 86 27 9 chr18 16932804 16934125 -69054809 - L1P3 LINE L1 -725 5744 4402 1455 122 14 0 chr18 16934113 16934326 -69054608 - L1P3 LINE L1 -6245 216 1 * 1495 151 70 8 chr18 16935852 16936111 -69052823 + AluJo SINE Alu 1 275 -37 189 94 0 0 chr18 16936117 16936149 -69052785 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 21 0 0 0 chr18 16937101 16937122 -69051812 + AT_rich Low_complexity Low_complexity 1 21 0 232 265 200 12 chr18 16937350 16937460 -69051474 + MIR SINE MIR 39 167 -68 24 67 0 0 chr18 16937774 16937819 -69051115 + AT_rich Low_complexity Low_complexity 1 45 0 497 232 191 29 chr18 16937838 16938178 -69050756 + L1ME4a LINE L1 5678 6072 -49 184 221 151 35 chr18 16938648 16938734 -69050200 - L2 LINE L2 -40 3232 3137 260 231 46 108 chr18 16938784 16938914 -69050020 - L2 LINE L2 -216 3056 2935 546 222 144 6 chr18 16939534 16939701 -69049233 + MIR SINE MIR 67 256 -6 529 241 133 6 chr18 16939730 16939896 -69049038 - MIR SINE MIR -74 188 2 1225 236 50 105 chr18 16940340 16940552 -69048382 - L1MC4 LINE L1 -2 8040 7818 2201 104 7 16 chr18 16940552 16940859 -69048075 + AluY SINE Alu 1 304 -7 1225 236 50 105 chr18 16940859 16941142 -69047792 - L1MC4 LINE L1 -224 7818 7572 2408 227 197 11 chr18 16941646 16942590 -69046344 - L1MC4 LINE L1 -283 7576 6442 1349 151 0 35 chr18 16942748 16942980 -69045954 - AluJo SINE Alu -88 224 1 243 0 0 0 chr18 16945293 16945320 -69043614 + (T)n Simple_repeat Simple_repeat 1 27 0 1053 9 0 0 chr18 16945328 16945441 -69043493 - SVA Other Other -6 1380 1268 2135 67 7 7 chr18 16945441 16945710 -69043224 - LTR5 LTR ERVK -639 330 62 5095 61 12 6 chr18 16945811 16946464 -69042470 - SVA Other Other -725 661 5 23 33 0 0 chr18 16946694 16946724 -69042210 + AT_rich Low_complexity Low_complexity 1 30 0 1192 187 7 9 chr18 16946939 16947229 -69041705 - MER2 DNA MER2_type -3 342 2 210 217 120 87 chr18 16948076 16948168 -69040766 + MIR SINE MIR 49 143 -119 1366 175 49 140 chr18 16948228 16948657 -69040277 + MER47B DNA MER2_type 3 392 -26 1808 153 7 14 chr18 16950945 16951239 -69037695 - AluJb SINE Alu -20 292 1 957 119 0 14 chr18 16951746 16951889 -69037045 + FRAM SINE Alu 32 172 -4 939 186 60 64 chr18 16953121 16953422 -69035512 + L1 LINE L1 4487 4761 -1385 309 310 107 65 chr18 16953535 16953751 -69035183 + L1MB5 LINE L1 1018 1242 -5607 253 155 29 19 chr18 16953759 16953862 -69035072 + (CCA)n Simple_repeat Simple_repeat 3 106 0 180 0 0 0 chr18 16953998 16954018 -69034916 + (CCA)n Simple_repeat Simple_repeat 3 22 0 226 316 209 13 chr18 16954295 16954453 -69034481 - MIR SINE MIR -21 241 53 660 231 8 0 chr18 16954465 16954586 -69034348 + FLAM_A SINE Alu 1 122 -20 21 0 0 0 chr18 16954586 16954607 -69034327 + AT_rich Low_complexity Low_complexity 1 21 0 3187 156 10 8 chr18 16955148 16955894 -69033040 + L1PA16 LINE L1 4740 5484 -682 532 106 0 0 chr18 16955895 16955961 -69032973 + AluJb SINE Alu 86 151 -161 1103 166 0 6 chr18 16955962 16956137 -69032797 + AluSc SINE Alu 119 292 -17 4230 136 50 11 chr18 16956138 16956802 -69032132 + L1PA16 LINE L1 5476 6165 -1 264 252 135 14 chr18 16956856 16957078 -69031856 + L1MB5 LINE L1 3723 3971 -2877 1455 217 42 28 chr18 16957439 16957799 -69031135 + L1MB5 LINE L1 5303 5667 -1181 1898 203 40 88 chr18 16957799 16958370 -69030564 - MLT2B3 LTR ERVL 0 554 11 2249 98 0 3 chr18 16958377 16958674 -69030260 - AluY SINE Alu -15 296 1 3726 181 33 15 chr18 16958700 16959709 -69029225 + L1MB5 LINE L1 5660 6687 -189 1737 246 70 22 chr18 16961569 16962125 -69026809 - L1ME2 LINE L1 -58 6106 5524 185 235 132 37 chr18 16962552 16962688 -69026246 - L2 LINE L2 -203 3069 2921 228 259 0 0 chr18 16962974 16963032 -69025902 - L2 LINE L2 -925 2389 2332 2452 61 7 0 chr18 16963865 16964158 -69024776 - AluY SINE Alu -16 295 1 1760 166 3 11 chr18 16964190 16964474 -69024460 + AluJb SINE Alu 1 282 -30 22 35 0 0 chr18 16964550 16964579 -69024355 + AT_rich Low_complexity Low_complexity 1 29 0 288 219 176 42 chr18 16965918 16966037 -69022897 + MIR SINE MIR 105 239 -23 189 0 0 0 chr18 16966048 16966069 -69022865 + (CAT)n Simple_repeat Simple_repeat 1 21 0 2120 110 14 0 chr18 16966710 16967014 -69021920 + AluSq SINE Alu 1 308 0 2119 115 3 14 chr18 16969256 16969391 -69019543 + AluSx SINE Alu 1 136 -176 2352 86 0 0 chr18 16969391 16969681 -69019253 + AluSc SINE Alu 1 290 -19 2119 115 3 14 chr18 16969681 16969841 -69019093 + AluSx SINE Alu 136 293 -19 252 0 0 0 chr18 16970082 16970110 -69018824 + (TG)n Simple_repeat Simple_repeat 2 29 0 2257 123 0 0 chr18 16971127 16971420 -69017514 + AluSq SINE Alu 1 293 -20 2021 136 10 0 chr18 16973389 16973684 -69015250 - AluSx SINE Alu -14 298 1 239 327 69 0 chr18 16973955 16974056 -69014878 + L2 LINE L2 2232 2339 -975 208 346 29 19 chr18 16974913 16975017 -69013917 - MIR SINE MIR 0 262 158 180 0 0 0 chr18 16975123 16975143 -69013791 + (CTGGGG)n Simple_repeat Simple_repeat 3 22 0 338 239 25 4 chr18 16975174 16975269 -69013665 - MIR SINE MIR -76 132 38 1003 262 168 20 chr18 16976408 16976919 -69012015 + MLT1E LTR MaLR 7 593 0 2111 94 30 30 chr18 16977105 16977402 -69011532 - AluSq SINE Alu -16 297 1 2128 106 0 17 chr18 16979430 16979731 -69009203 + AluY SINE Alu 14 309 -2 2064 133 3 3 chr18 16979815 16980115 -69008819 - AluJo SINE Alu -4 308 9 2416 98 299 117 chr18 16981214 16981823 -69007111 - pTR5 LTR ERV1 0 2438 1719 291 28 0 0 chr18 16981960 16981996 -69006938 + (A)n Simple_repeat Simple_repeat 1 36 0 423 0 0 0 chr18 16982061 16982108 -69006826 + (CATA)n Simple_repeat Simple_repeat 2 48 0 223 300 91 18 chr18 16982181 16982401 -69006533 - L2 LINE L2 -167 3146 2911 2236 99 0 0 chr18 16982560 16982883 -69006051 - AluSx SINE Alu 0 323 1 469 230 177 0 chr18 16982901 16983038 -69005896 + FLAM_C SINE Alu 1 157 0 347 194 51 31 chr18 16985263 16985361 -69003573 + MIR SINE MIR 101 200 -62 3488 122 53 32 chr18 16985374 16985995 -69002939 - MER51A LTR ERV1 0 634 1 314 236 93 93 chr18 16986500 16986684 -69002250 + L1MC5 LINE L1 7502 7691 -270 1243 149 178 4 chr18 16986684 16986959 -69001975 + AluJo SINE Alu 1 317 0 314 236 93 93 chr18 16986959 16987093 -69001841 + L1MC5 LINE L1 7690 7823 -138 24 0 0 0 chr18 16987104 16987128 -69001806 + AT_rich Low_complexity Low_complexity 1 24 0 2412 73 0 10 chr18 16988126 16988427 -69000507 - AluY SINE Alu -13 298 1 1732 174 13 13 chr18 16989503 16989802 -68999132 + AluJb SINE Alu 1 299 -13 1194 181 34 38 chr18 16989862 16989895 -68999039 - MLT1E3 LTR MaLR 0 624 592 3242 136 4 2 chr18 16989895 16990389 -68998545 - LOR1a LTR ERV1 -2 495 1 1194 181 34 38 chr18 16990389 16990620 -68998314 - MLT1E3 LTR MaLR -32 592 361 575 256 35 69 chr18 16990676 16990879 -68998055 + MER8 DNA MER2_type 11 206 -33 329 190 64 5 chr18 16990933 16991047 -68997887 - MLT1E3 LTR MaLR -385 269 90 4240 193 47 29 chr18 16991055 16991925 -68997009 + L1MB2 LINE L1 4657 5580 -591 2093 155 36 65 chr18 16991925 16992370 -68996564 - MSTB1 LTR MaLR 0 432 1 4240 193 47 29 chr18 16992370 16992972 -68995962 + L1MB2 LINE L1 5580 6170 -1 339 260 13 0 chr18 16992994 16993071 -68995863 + L2 LINE L2 3236 3313 0 21 36 0 0 chr18 16993141 16993169 -68995765 + AT_rich Low_complexity Low_complexity 1 28 0 33 25 0 0 chr18 16993308 16993348 -68995586 + AT_rich Low_complexity Low_complexity 1 40 0 325 191 0 8 chr18 16993369 16993447 -68995487 - L1MB2 LINE L1 -258 5913 5852 466 132 0 0 chr18 16993448 16993516 -68995418 - L1MB2 LINE L1 -547 5624 5557 1229 181 38 62 chr18 16993516 16993804 -68995130 + MSTB1 LTR MaLR 1 281 -151 1829 229 24 4 chr18 16993823 16994326 -68994608 - L1M4c LINE L1 -3038 2932 2420 * 3080 140 34 34 chr18 16994313 16994898 -68994036 - L1MA4 LINE L1 -400 6082 5498 6000 119 44 0 chr18 16994903 16995859 -68993075 - L1PA13 LINE L1 -11 6152 5189 1893 140 46 3 chr18 16995859 16996208 -68992726 - L1MA4 LINE L1 -1414 4914 4551 1827 121 15 50 chr18 16996212 16996550 -68992384 - THE1C LTR MaLR -49 326 1 21 36 0 0 chr18 16997278 16997306 -68991628 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr18 16997583 16997605 -68991329 + AT_rich Low_complexity Low_complexity 1 22 0 602 175 32 2 chr18 16999133 16999274 -68989660 + L1ME LINE L1 5622 5730 -434 10371 190 36 24 chr18 16999287 16999569 -68989365 - L1MA4 LINE L1 -1766 4562 4285 2035 157 0 0 chr18 16999569 16999862 -68989072 + AluSx SINE Alu 1 293 -19 10371 190 36 24 chr18 16999862 17000458 -68988476 - L1MA4 LINE L1 -2043 4285 3698 2198 78 0 41 chr18 17000458 17000775 -68988159 - AluY SINE Alu 0 305 1 10371 190 36 24 chr18 17000775 17003472 -68985462 - L1MA4 LINE L1 -2630 3698 910 1251 217 91 31 chr18 17003472 17003758 -68985176 + AluJo SINE Alu 1 303 -9 10371 190 36 24 chr18 17003758 17004676 -68984258 - L1MA4 LINE L1 -5418 910 4 2322 234 31 81 chr18 17004672 17005241 -68983693 - L1M4c LINE L1 -4516 1385 858 * 1967 162 0 6 chr18 17005241 17005555 -68983379 - AluJb SINE Alu 0 312 1 2322 234 31 81 chr18 17005555 17006005 -68982929 - L1M4c LINE L1 -5043 858 387 436 333 69 43 chr18 17006160 17006553 -68982381 - L1M4c LINE L1 -5487 404 2 337 108 12 145 chr18 17007038 17007078 -68981856 - L1MB3 LINE L1 -11 6172 6147 2511 63 3 0 chr18 17007078 17007379 -68981555 - AluY SINE Alu -9 302 1 337 108 12 145 chr18 17007379 17007421 -68981513 - L1MB3 LINE L1 -36 6147 6101 271 278 62 0 chr18 17007632 17007729 -68981205 - MIR SINE MIR -62 146 44 382 342 0 0 chr18 17008876 17008993 -68979941 + MIR3 SINE MIR 44 160 -48 742 98 0 0 chr18 17009341 17009443 -68979491 - FRAM SINE Alu -40 136 35 359 264 72 61 chr18 17009889 17010176 -68978758 - MER31-int LTR ERV1 -1139 5493 3542 11450 146 37 13 chr18 17011548 17014917 -68974017 + L1PB1 LINE L1 3 3292 -3575 1982 102 4 8 chr18 17014917 17015183 -68973751 + AluSg1 SINE Alu 14 328 0 270 80 0 20 chr18 17015183 17015233 -68973701 + (CAAA)n Simple_repeat Simple_repeat 1 180 0 11450 146 37 13 chr18 17015233 17017711 -68971223 + L1PB1 LINE L1 3292 6176 -691 1758 150 0 0 chr18 17017711 17017978 -68970956 + AluSx SINE Alu 36 302 -10 11450 146 37 13 chr18 17017978 17018686 -68970248 + L1PB1 LINE L1 6176 6866 -1 25 65 0 0 chr18 17018686 17018732 -68970202 + AT_rich Low_complexity Low_complexity 1 46 0 1944 138 7 3 chr18 17018766 17019073 -68969861 - AluSq SINE Alu 0 308 1 839 167 0 0 chr18 17019464 17019596 -68969338 + FLAM_C SINE Alu 1 132 -1 394 194 32 0 chr18 17020349 17020442 -68968492 - LTR37B LTR ERV1 -11 457 362 1064 232 95 77 chr18 17020647 17021100 -68967834 + MER87 LTR ERV1 80 540 -1 400 265 111 47 chr18 17021759 17022102 -68966832 + L1ME LINE L1 43 407 -5663 1441 206 92 92 chr18 17022253 17022710 -68966224 + MER101 LTR ERV1 11 467 -7 882 232 74 14 chr18 17022806 17023090 -68965844 - L1MA9 LINE L1 -71 6241 5941 1671 156 34 0 chr18 17024112 17024375 -68964559 - AluJb SINE Alu -38 274 3 692 172 0 22 chr18 17025077 17025113 -68963821 - L1MA10 LINE L1 -1 6333 6298 2331 171 20 34 chr18 17025113 17025553 -68963381 + Tigger2a DNA MER2_type 1 434 0 692 172 0 22 chr18 17025553 17025650 -68963284 - L1MA10 LINE L1 -36 6298 6203 3443 188 49 26 chr18 17025716 17026449 -68962485 + L1MB8 LINE L1 5423 6172 -6 397 230 0 96 chr18 17026666 17026708 -68962226 - L1MA10 LINE L1 -11 6323 6279 2336 99 0 0 chr18 17026708 17027002 -68961932 - AluSg SINE Alu -16 294 1 397 230 0 96 chr18 17027002 17027094 -68961840 - L1MA10 LINE L1 -55 6279 6202 2984 106 25 5 chr18 17027101 17027535 -68961399 + MER4C LTR ERV1 23 465 0 1370 225 70 54 chr18 17027538 17027908 -68961026 - L1ME1 LINE L1 -123 6043 5661 3553 183 54 16 chr18 17027908 17028614 -68960320 - MER44D DNA MER2_type 0 605 1 1370 225 70 54 chr18 17028614 17028745 -68960189 - L1ME1 LINE L1 -505 5661 5534 2289 96 0 7 chr18 17029331 17029632 -68959302 + AluSx SINE Alu 1 299 -13 634 232 63 11 chr18 17029819 17030009 -68958925 - L1MD2 LINE L1 -1 6358 6159 253 304 13 0 chr18 17030009 17030088 -68958846 + MER94 DNA DNA 26 105 -29 371 310 52 6 chr18 17030386 17030560 -68958374 + MIR SINE MIR 35 216 -46 205 146 0 73 chr18 17031978 17032033 -68956901 + MIR SINE MIR 97 147 -61 269 280 212 26 chr18 17034512 17034890 -68954044 + L1MC4a LINE L1 5869 6316 -1492 21 57 0 0 chr18 17035580 17035615 -68953319 + AT_rich Low_complexity Low_complexity 1 35 0 2375 110 0 0 chr18 17035867 17036176 -68952758 - AluSc SINE Alu 0 309 1 312 277 62 0 chr18 17036277 17036389 -68952545 + L1MC/D LINE L1 4959 5077 -1069 678 196 7 7 chr18 17036448 17036591 -68952343 - L1MB3 LINE L1 -1 6182 6040 315 235 142 29 chr18 17036677 17036880 -68952054 + L1MC/D LINE L1 5255 5482 -688 1007 173 0 0 chr18 17037089 17037245 -68951689 + AluJb SINE Alu 136 291 -21 272 202 186 24 chr18 17037278 17037336 -68951598 + L1MC/D LINE L1 5614 5661 -2147 381 75 0 0 chr18 17037336 17037389 -68951545 + (TG)n Simple_repeat Simple_repeat 1 53 0 272 202 186 24 chr18 17037389 17037454 -68951480 + L1MC/D LINE L1 5661 5757 -2051 356 202 20 20 chr18 17038254 17038369 -68950565 + MLT1H LTR MaLR 11 127 -422 233 250 36 12 chr18 17038618 17038702 -68950232 + MLT1H1 LTR MaLR 413 498 -57 27 49 0 0 chr18 17038702 17038743 -68950191 + AT_rich Low_complexity Low_complexity 1 41 0 1050 154 0 6 chr18 17038873 17039042 -68949892 - AluSq SINE Alu -7 306 139 1750 117 34 0 chr18 17039042 17039281 -68949653 - AluSq SINE Alu -66 247 1 767 258 85 16 chr18 17040164 17040525 -68948409 + L1ME3A LINE L1 5582 5968 -202 1302 234 112 18 chr18 17040575 17040960 -68947974 + LTR40b LTR ERVL 1 421 -41 1857 153 0 7 chr18 17041132 17041414 -68947520 + AluJb SINE Alu 1 280 -32 2552 27 17 3 chr18 17041958 17042253 -68946681 - AluY SINE Alu -12 299 1 4784 175 26 18 chr18 17042546 17043975 -68944959 - L1MB3 LINE L1 -2 6181 4733 22 0 0 0 chr18 17043995 17044017 -68944917 + AT_rich Low_complexity Low_complexity 1 22 0 390 304 24 0 chr18 17044067 17044192 -68944742 - MER63 DNA MER1_type -307 755 2 472 271 25 38 chr18 17044465 17044699 -68944235 - HAL1b LINE L1 -916 432 261 2270 110 10 0 chr18 17044823 17045115 -68943819 - AluSx SINE Alu -17 295 1 1768 184 31 3 chr18 17045147 17045473 -68943461 - L1MB5 LINE L1 0 6174 5840 2160 209 102 89 chr18 17045474 17045623 -68943311 - L1M4c LINE L1 -4606 2353 2208 180 0 0 0 chr18 17045623 17045643 -68943291 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2160 209 102 89 chr18 17045643 17046365 -68942569 - L1M4c LINE L1 -4751 2208 1498 1400 214 33 10 chr18 17046365 17046664 -68942270 - AluJo SINE Alu -6 306 1 2160 209 102 89 chr18 17046664 17046978 -68941956 - L1M4c LINE L1 -5461 1498 1190 1273 135 16 10 chr18 17047051 17047243 -68941691 - AluSc SINE Alu -8 301 109 2262 172 57 63 chr18 17047355 17047862 -68941072 - MLT1D LTR MaLR -1 504 1 456 316 22 0 chr18 17047868 17048004 -68940930 + L1ME3 LINE L1 5602 5740 -2068 834 282 29 0 chr18 17048009 17048254 -68940680 + MIR SINE MIR 1 252 -10 2254 121 0 0 chr18 17048369 17048667 -68940267 - AluSq SINE Alu -15 298 1 296 231 55 0 chr18 17048667 17048758 -68940176 + L1ME3 LINE L1 5858 5953 -209 554 284 173 22 chr18 17049271 17049858 -68939076 + L2 LINE L2 2615 3304 -9 2146 102 0 53 chr18 17050178 17050500 -68938434 - AluSx SINE Alu -7 305 1 580 258 53 16 chr18 17050982 17051172 -68937762 - L1MC2 LINE L1 -4 6340 6144 1123 178 10 10 chr18 17051191 17051393 -68937541 + AluJo SINE Alu 25 226 -86 2907 141 2 5 chr18 17051393 17051882 -68937052 - L1MC1 LINE L1 -215 6118 5600 347 308 128 14 chr18 17052157 17052368 -68936566 - L1MC4 LINE L1 -1036 7006 6772 21 0 0 0 chr18 17052597 17052618 -68936316 + AT_rich Low_complexity Low_complexity 1 21 0 505 298 60 35 chr18 17053686 17054005 -68934929 + MLT1K LTR MaLR 253 579 -9 263 292 208 0 chr18 17054144 17054312 -68934622 + L3 LINE CR1 1056 1258 -319 397 220 101 0 chr18 17055018 17055127 -68933807 + L2 LINE L2 3192 3311 -2 600 167 20 0 chr18 17055178 17055280 -68933654 + MLT1A1 LTR MaLR 262 365 0 4193 121 10 0 chr18 17055366 17055978 -68932956 - L1PA13 LINE L1 -11 6152 5535 7442 46 1 4 chr18 17056228 17057938 -68930996 + L1PA5 LINE L1 4411 6154 0 896 98 0 0 chr18 17058410 17058532 -68930402 - AluSg SINE Alu -188 122 1 5948 155 29 23 chr18 17058895 17060272 -68928662 - L1MA5A LINE L1 -1 6296 4907 468 49 0 0 chr18 17060272 17060333 -68928601 - L1PA12 LINE L1 -11 6157 6097 5948 155 29 23 chr18 17060333 17060646 -68928288 - L1MA5A LINE L1 -1390 4907 4597 7481 169 31 10 chr18 17060654 17062131 -68926803 + L1MA5A LINE L1 3120 4627 -1519 2286 84 0 14 chr18 17062399 17062709 -68926225 - AluSq SINE Alu 0 306 1 181 163 47 0 chr18 17064617 17064660 -68924274 - L2 LINE L2 -557 2757 2713 1658 187 0 13 chr18 17064963 17065268 -68923666 + AluJb SINE Alu 3 303 -9 182 180 225 18 chr18 17065649 17065760 -68923174 - L2 LINE L2 -313 3000 2867 261 229 16 0 chr18 17066725 17066786 -68922148 + MER5A DNA MER1_type 128 189 0 1106 191 9 5 chr18 17067923 17068138 -68920796 + MER20 DNA MER1_type 1 216 -3 711 182 142 0 chr18 17068204 17068352 -68920582 + FRAM SINE Alu 1 169 -7 216 97 0 0 chr18 17069451 17069482 -68919452 + (TCCCC)n Simple_repeat Simple_repeat 2 32 0 1715 167 19 7 chr18 17069486 17069756 -68919178 - AluJo SINE Alu -39 273 1 210 37 0 0 chr18 17069962 17069989 -68918945 + (TCCC)n Simple_repeat Simple_repeat 2 28 0 200 346 152 15 chr18 17071083 17071346 -68917588 - L3 LINE CR1 -126 1451 1153 563 264 12 42 chr18 17072896 17073063 -68915871 + MIR SINE MIR 32 193 -69 320 338 73 9 chr18 17074342 17074561 -68914373 + L2 LINE L2 2432 2664 -650 389 278 30 38 chr18 17075326 17075459 -68913475 - MER5A DNA MER1_type -3 186 55 537 171 8 57 chr18 17077227 17077350 -68911584 - FLAM_A SINE Alu -3 139 23 1465 205 33 16 chr18 17079427 17079734 -68909200 + AluJo SINE Alu 1 312 0 222 321 18 9 chr18 17080204 17080316 -68908618 + (TATATG)n Simple_repeat Simple_repeat 4 116 0 207 0 0 0 chr18 17081242 17081265 -68907669 + (T)n Simple_repeat Simple_repeat 1 23 0 6892 55 2 0 chr18 17081372 17082410 -68906524 + L1PA5 LINE L1 5115 6154 0 877 237 75 19 chr18 17082754 17083062 -68905872 - L1ME3 LINE L1 -13 6149 5825 2073 62 16 29 chr18 17083079 17083385 -68905549 - L1PA10 LINE L1 -4 6164 5863 780 94 16 0 chr18 17083385 17083513 -68905421 + L1P LINE L1 5285 5414 -760 562 262 29 32 chr18 17083521 17083800 -68905134 - L1ME3 LINE L1 -344 5818 5451 236 333 0 0 chr18 17083829 17083910 -68905024 - L1ME3 LINE L1 -766 5396 5316 427 267 30 8 chr18 17084396 17084527 -68904407 - MLT2E LTR ERVL -492 136 3 183 220 85 17 chr18 17085309 17085368 -68903566 - MIR SINE MIR -82 180 118 228 267 59 59 chr18 17085935 17086036 -68902898 - L2 LINE L2 -3 3310 3210 2503 53 0 0 chr18 17086250 17086568 -68902366 + AluY SINE Alu 1 318 0 581 204 166 6 chr18 17087227 17087384 -68901550 + MIR SINE MIR 81 262 0 341 219 89 41 chr18 17088354 17088500 -68900434 + L1ME4a LINE L1 5965 6117 -4 2263 97 3 23 chr18 17088803 17089111 -68899823 - AluSp SINE Alu -11 302 1 441 297 13 32 chr18 17090245 17090400 -68898534 - MIR SINE MIR -38 224 73 2389 84 7 3 chr18 17091400 17091699 -68897235 + AluSx SINE Alu 1 300 -12 357 252 0 0 chr18 17093050 17093153 -68895781 + (TG)n Simple_repeat Simple_repeat 1 103 0 287 354 69 7 chr18 17093165 17093309 -68895625 + L2 LINE L2 3116 3268 -4 2351 103 10 0 chr18 17093411 17093721 -68895213 - AluSp SINE Alu 0 313 1 21 0 0 0 chr18 17094088 17094109 -68894825 + AT_rich Low_complexity Low_complexity 1 21 0 221 259 0 0 chr18 17094406 17094460 -68894474 + T-rich Low_complexity Low_complexity 5 58 0 258 208 39 26 chr18 17094517 17094594 -68894340 - L2 LINE L2 -7 3306 3229 272 290 0 0 chr18 17096298 17096360 -68892574 + polypyrimidine Low_complexity Low_complexity 3 64 0 186 133 0 0 chr18 17097319 17097349 -68891585 + (T)n Simple_repeat Simple_repeat 1 30 0 231 298 134 12 chr18 17098497 17098668 -68890266 - L1ME LINE L1 -474 5647 5456 468 35 0 0 chr18 17098859 17098917 -68890017 + (TAAAA)n Simple_repeat Simple_repeat 4 61 0 2187 142 19 16 chr18 17099703 17100077 -68888857 - THE1C LTR MaLR 0 375 1 373 127 2 60 chr18 17100784 17100859 -68888075 + AluJo SINE Alu 74 135 -167 369 298 89 18 chr18 17101431 17101599 -68887335 + MIR SINE MIR 69 248 -14 1396 220 28 25 chr18 17102111 17102475 -68886459 + MLT1A1 LTR MaLR 1 365 0 312 267 118 25 chr18 17102584 17102745 -68886189 + Charlie7 DNA MER1_type 2435 2610 -2 2420 89 0 3 chr18 17103004 17103297 -68885637 - AluSp SINE Alu -16 297 6 181 202 246 70 chr18 17103791 17103905 -68885029 - L2 LINE L2 0 3272 3139 460 298 118 60 chr18 17104070 17104503 -68884431 - L2 LINE L2 -611 2703 2246 1725 155 30 30 chr18 17108870 17109167 -68879767 + AluJo SINE Alu 1 297 -15 2486 80 10 0 chr18 17110279 17110578 -68878356 + AluSc SINE Alu 1 302 -7 697 124 0 0 chr18 17111000 17111113 -68877821 + L1PB4 LINE L1 6031 6143 -13 27 0 0 0 chr18 17111113 17111140 -68877794 + AT_rich Low_complexity Low_complexity 1 27 0 429 259 162 41 chr18 17112622 17112819 -68876115 - MIR SINE MIR -21 241 21 249 108 0 0 chr18 17113364 17113401 -68875533 + (T)n Simple_repeat Simple_repeat 1 37 0 802 233 0 0 chr18 17114927 17115099 -68873835 + FAM SINE Alu 1 172 -3 1362 106 23 0 chr18 17115596 17115814 -68873120 + L1MA1 LINE L1 6080 6302 0 237 357 54 0 chr18 17115816 17115928 -68873006 - L2 LINE L2 -12 3260 3143 2006 157 0 3 chr18 17116048 17116353 -68872581 - AluSg SINE Alu -6 304 1 1658 254 92 25 chr18 17116371 17116925 -68872009 - MLT1E LTR MaLR -2 591 1 180 118 59 0 chr18 17118042 17118076 -68870858 - L3 LINE CR1 -290 1287 1252 302 219 32 148 chr18 17118753 17118908 -68870026 + L2 LINE L2 3172 3308 -5 425 228 94 40 chr18 17120276 17120425 -68868509 + MIR SINE MIR 28 184 -78 1759 152 0 8 chr18 17121176 17121440 -68867494 + AluJo SINE Alu 24 285 -27 198 0 0 0 chr18 17121460 17121482 -68867452 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 2703 80 14 3 chr18 17121921 17122272 -68866662 - THE1A LTR MaLR 0 355 1 11934 93 19 0 chr18 17122272 17123823 -68865111 - THE1A-int LTR MaLR 0 1580 1 2500 85 38 0 chr18 17123823 17124165 -68864769 - THE1A LTR MaLR 0 355 1 385 178 14 0 chr18 17125934 17126007 -68862927 + L1M3 LINE L1 5508 5581 -602 1974 142 17 3 chr18 17126007 17126353 -68862581 - L1MB3 LINE L1 -42 6141 5791 1494 158 4 4 chr18 17126419 17126653 -68862281 - AluJo SINE Alu -8 304 71 1047 51 22 14 chr18 17134085 17134223 -68854711 + MER85 DNA T2_type 1 139 0 194 307 107 36 chr18 17134544 17134684 -68854250 - MIR3 SINE MIR -21 187 38 248 280 63 69 chr18 17135948 17136123 -68852811 - MIR3 SINE MIR -7 201 28 1063 269 3 3 chr18 17136349 17136632 -68852302 - MLT1B LTR MaLR 0 390 108 578 139 0 0 chr18 17136650 17136729 -68852205 - AluJo SINE Alu -232 80 2 25 51 0 0 chr18 17136740 17136779 -68852155 + AT_rich Low_complexity Low_complexity 1 39 0 291 273 32 29 chr18 17136931 17137064 -68851870 + MIR SINE MIR 17 151 -57 1875 148 7 20 chr18 17137576 17137874 -68851060 + AluJo SINE Alu 7 300 -12 233 240 47 6 chr18 17138596 17138767 -68850167 + (ATGGTG)n Simple_repeat Simple_repeat 3 180 0 1817 178 7 3 chr18 17139620 17139913 -68849021 + AluJo SINE Alu 1 294 -18 238 333 41 7 chr18 17141183 17141330 -68847604 - MER103 DNA DNA -13 153 2 204 321 12 12 chr18 17142807 17142975 -68845959 + (TTATG)n Simple_repeat Simple_repeat 5 172 0 1043 164 12 0 chr18 17143308 17143473 -68845461 - AluJo SINE Alu -17 295 129 232 175 0 12 chr18 17143477 17143563 -68845371 + CT-rich Low_complexity Low_complexity 1 84 0 769 180 0 0 chr18 17143563 17143685 -68845249 - AluJo SINE Alu -187 125 4 15855 128 38 32 chr18 17145015 17147484 -68841450 + Tigger2 DNA MER2_type 2 2489 -229 1694 172 7 10 chr18 17147484 17147775 -68841159 - AluJb SINE Alu -22 290 1 15855 128 38 32 chr18 17147775 17148006 -68840928 + Tigger2 DNA MER2_type 2489 2717 -1 843 295 64 52 chr18 17148291 17148772 -68840162 - L1MC4a LINE L1 -1982 5826 5340 1633 151 3 46 chr18 17150119 17150423 -68838511 + AluJo SINE Alu 6 296 -16 406 289 63 25 chr18 17150939 17151098 -68837836 + MIR SINE MIR 7 171 -91 1612 140 94 38 chr18 17151829 17151887 -68837047 + MER46B DNA MER2_type 1 54 -2677 2513 57 0 13 chr18 17151887 17152188 -68836746 - AluY SINE Alu -14 297 1 1612 140 94 38 chr18 17152188 17152471 -68836463 + MER46B DNA MER2_type 54 236 0 1774 191 23 0 chr18 17152520 17152819 -68836115 + AluJo SINE Alu 1 306 -6 207 0 0 0 chr18 17153946 17153969 -68834965 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 508 207 147 0 chr18 17154950 17155066 -68833868 - AluJo SINE Alu -178 134 2 1136 323 114 22 chr18 17155359 17155565 -68833369 + L1MEc LINE L1 785 971 -5244 2322 82 34 0 chr18 17155565 17155858 -68833076 + AluSp SINE Alu 1 303 -10 1136 323 114 22 chr18 17155858 17157244 -68831690 + L1MEc LINE L1 971 2483 -3732 684 212 104 5 chr18 17157713 17157935 -68830999 + L1ME4a LINE L1 5877 6120 -1 2143 104 0 0 chr18 17158322 17158590 -68830344 - AluSx SINE Alu -18 294 27 182 308 19 58 chr18 17159295 17159399 -68829535 - MIR SINE MIR -84 178 79 597 270 5 15 chr18 17159648 17159852 -68829082 - MER113 DNA MER1_type? -313 208 7 22 0 0 0 chr18 17159971 17159993 -68828941 + AT_rich Low_complexity Low_complexity 1 22 0 347 261 35 35 chr18 17160575 17160690 -68828244 - L3 LINE CR1 -90 1487 1373 1891 152 23 13 chr18 17161637 17161983 -68826951 + AluSx SINE Alu 1 349 0 21 36 0 0 chr18 17162032 17162060 -68826874 + AT_rich Low_complexity Low_complexity 1 28 0 1009 194 11 57 chr18 17162346 17162629 -68826305 - AluSx SINE Alu -8 304 35 209 254 28 0 chr18 17162658 17162729 -68826205 + T-rich Low_complexity Low_complexity 2 74 0 2192 103 0 20 chr18 17162925 17163226 -68825708 - AluY SINE Alu -16 295 1 657 188 63 92 chr18 17163463 17164051 -68824883 - MER4C LTR ERV1 0 465 1 233 127 26 63 chr18 17164480 17164529 -68824405 + MIR SINE MIR 112 154 -108 2342 70 0 48 chr18 17164534 17164850 -68824084 - AluY SINE Alu -10 301 1 3493 143 28 8 chr18 17164882 17165520 -68823414 - LTR34 LTR ERV1 0 699 49 1055 86 0 0 chr18 17165557 17165685 -68823249 - AluY SINE Alu -17 294 167 3924 156 51 7 chr18 17166671 17167363 -68821571 + MER72 LTR ERV1 1 722 0 23 33 0 0 chr18 17167659 17167689 -68821245 + AT_rich Low_complexity Low_complexity 1 30 0 1591 259 75 19 chr18 17167712 17168287 -68820647 - L1MC4a LINE L1 -1901 5907 5301 2306 67 10 27 chr18 17168746 17169046 -68819888 - AluY SINE Alu -16 295 1 263 270 99 27 chr18 17169084 17169347 -68819587 - L1MC4a LINE L1 -1487 4659 4378 4196 165 84 15 chr18 17169390 17170197 -68818737 + MER21B LTR ERV1 1 863 0 180 176 0 0 chr18 17170209 17170243 -68818691 + A-rich Low_complexity Low_complexity 2 35 0 753 179 0 0 chr18 17170659 17170782 -68818152 - FLAM_A SINE Alu -8 125 3 6302 181 33 16 chr18 17171026 17173018 -68815916 - L1MC1 LINE L1 0 6333 4291 2043 143 10 3 chr18 17173018 17173318 -68815616 - AluY SINE Alu -9 302 1 6302 181 33 16 chr18 17173318 17173706 -68815228 - L1MC1 LINE L1 -2042 4291 3911 759 262 144 59 chr18 17174166 17174658 -68814276 - HAL1b LINE L1 -442 906 373 1889 135 58 4 chr18 17174671 17175036 -68813898 - MSTB1 LTR MaLR -3 429 4 201 195 24 0 chr18 17175558 17175599 -68813335 + CT-rich Low_complexity Low_complexity 1 42 0 239 248 124 54 chr18 17176294 17176398 -68812536 - MIR SINE MIR -119 143 27 1050 166 185 50 chr18 17176398 17176657 -68812277 + AluJo SINE Alu 1 294 -8 239 248 124 54 chr18 17176657 17176681 -68812253 - MIR SINE MIR -235 27 6 2087 108 28 3 chr18 17177997 17178285 -68810649 - AluSc SINE Alu -14 295 1 21 36 0 0 chr18 17178408 17178436 -68810498 + AT_rich Low_complexity Low_complexity 1 28 0 8406 200 36 15 chr18 17178551 17181248 -68807686 - L1MB2 LINE L1 -1 6170 3423 225 0 0 0 chr18 17181265 17181290 -68807644 + (T)n Simple_repeat Simple_repeat 1 25 0 258 160 0 0 chr18 17181312 17181362 -68807572 - L1M4 LINE L1 -1722 4488 4439 * 1298 216 12 37 chr18 17181357 17181857 -68807077 - L1M4 LINE L1 -3741 2469 1983 44006 47 3 1 chr18 17181877 17188002 -68800932 - L1PA4 LINE L1 -7 6148 8 1326 186 50 9 chr18 17188012 17188396 -68800538 - L1M4 LINE L1 -4239 1973 1476 7907 101 13 9 chr18 17188397 17190351 -68798583 - L1PA8 LINE L1 0 6172 4212 5387 102 9 0 chr18 17190354 17191107 -68797827 + L1PA8 LINE L1 3445 4204 -1942 2508 228 41 62 chr18 17191104 17192070 -68796864 - L1M4 LINE L1 -4521 1610 605 * 240 263 40 50 chr18 17192104 17192203 -68796731 - L1M4 LINE L1 -5854 254 157 236 200 0 33 chr18 17192701 17192761 -68796173 - L1M4 LINE L1 -6082 59 2 1019 192 0 0 chr18 17192844 17193016 -68795918 + FAM SINE Alu 4 175 0 1622 162 38 35 chr18 17194419 17194709 -68794225 - AluJo SINE Alu -21 291 1 620 284 65 38 chr18 17194716 17195114 -68793820 - LTR16A1 LTR ERVL -1 456 48 368 263 58 73 chr18 17195325 17195530 -68793404 - L1ME3A LINE L1 -1 6169 5968 2200 115 0 6 chr18 17195631 17195943 -68792991 + AluSx SINE Alu 1 310 -2 585 202 55 0 chr18 17196040 17196149 -68792785 - FLAM_C SINE Alu -14 119 5 1981 239 88 56 chr18 17196209 17197095 -68791839 - L1MC5 LINE L1 -491 7470 6614 354 340 123 60 chr18 17197498 17198247 -68790687 + L3 LINE CR1 626 1421 -156 1303 73 34 34 chr18 17199933 17200110 -68788824 - AluY SINE Alu -87 224 48 2370 80 30 0 chr18 17201834 17202133 -68786801 + AluY SINE Alu 1 308 -3 28 0 0 0 chr18 17202493 17202521 -68786413 + AT_rich Low_complexity Low_complexity 1 28 0 284 252 81 16 chr18 17202951 17203074 -68785860 + L1ME4a LINE L1 5977 6107 -14 1820 154 3 30 chr18 17203117 17203416 -68785518 - AluJo SINE Alu -21 291 1 2227 88 3 3 chr18 17204563 17204846 -68784088 - AluSg SINE Alu -27 283 1 903 171 0 19 chr18 17204850 17205008 -68783926 - FRAM SINE Alu -17 159 5 901 159 0 43 chr18 17206651 17206814 -68782120 + AluJb SINE Alu 138 293 -19 533 107 0 0 chr18 17207702 17207777 -68781157 - AluJ/FLAM SINE Alu -236 76 2 240 274 0 14 chr18 17208376 17208449 -68780485 - L2 LINE L2 -546 2768 2697 246 239 0 0 chr18 17209046 17209092 -68779842 + MER112 DNA MER1_type 209 254 -6 2254 127 0 0 chr18 17209474 17209781 -68779153 - AluSg SINE Alu -3 307 1 2115 117 20 7 chr18 17210259 17210557 -68778377 + AluSx SINE Alu 1 302 -10 358 266 59 35 chr18 17211541 17211710 -68777224 + MER58A DNA MER1_type 45 217 -7 207 0 0 0 chr18 17211928 17211951 -68776983 + (TG)n Simple_repeat Simple_repeat 2 24 0 409 146 61 0 chr18 17213204 17213286 -68775648 + MER5A DNA MER1_type 16 102 -87 269 182 34 45 chr18 17213372 17213460 -68775474 - MER5A DNA MER1_type -20 169 83 397 279 39 0 chr18 17217782 17217911 -68771023 - MIR SINE MIR -47 215 82 524 238 16 32 chr18 17218273 17218399 -68770535 + L2 LINE L2 3189 3312 -1 217 151 75 0 chr18 17218724 17218777 -68770157 + (CCCG)n Simple_repeat Simple_repeat 1 57 0 919 113 8 0 chr18 17219524 17219648 -68769286 - AluSx SINE Alu -128 184 60 293 147 167 140 chr18 17219824 17219974 -68768960 - MER96B DNA MER1_type? -263 154 1 292 151 19 0 chr18 17220191 17220244 -68768690 + AluYb8 SINE Alu 135 188 -120 1959 136 3 23 chr18 17220566 17220868 -68768066 + AluSx SINE Alu 1 296 -16 186 318 95 56 chr18 17221080 17221259 -68767675 + MIR3 SINE MIR 22 207 -1 1795 160 33 16 chr18 17221750 17222057 -68766877 - AluJo SINE Alu 0 312 1 183 259 190 0 chr18 17222128 17222186 -68766748 - MIR3 SINE MIR -28 180 112 22 0 0 0 chr18 17222563 17222585 -68766349 + AT_rich Low_complexity Low_complexity 1 22 0 423 98 0 0 chr18 17223295 17223356 -68765578 + (TG)n Simple_repeat Simple_repeat 2 62 0 1994 183 14 19 chr18 17224976 17225407 -68763527 - L1MA7 LINE L1 -12 6279 5851 3920 136 15 2 chr18 17225407 17226147 -68762787 - L1MA8 LINE L1 -369 5922 5176 25 0 0 0 chr18 17226541 17226566 -68762368 + AT_rich Low_complexity Low_complexity 1 25 0 2244 89 3 7 chr18 17227046 17227338 -68761596 - AluSp SINE Alu -2 311 21 628 154 8 43 chr18 17227459 17227576 -68761358 + FLAM_C SINE Alu 2 114 -29 643 33 0 33 chr18 17227580 17227672 -68761262 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 199 304 54 43 chr18 17229028 17229120 -68759814 + MIR SINE MIR 41 133 -75 518 281 6 6 chr18 17230675 17230846 -68758088 - L1MA6 LINE L1 0 6300 6130 320 267 118 52 chr18 17231114 17231249 -68757685 - MER5B DNA MER1_type -13 165 22 509 296 158 10 chr18 17232419 17232804 -68756130 - L1ME4a LINE L1 -123 5998 5557 227 310 131 7 chr18 17233522 17233667 -68755267 + L3b LINE CR1 1163 1325 -258 361 271 28 0 chr18 17233969 17234076 -68754858 + MER103 DNA DNA 39 148 -18 189 282 165 24 chr18 17234244 17234329 -68754605 - L2 LINE L2 -9 3263 3167 22 0 0 0 chr18 17235190 17235212 -68753722 + AT_rich Low_complexity Low_complexity 1 22 0 347 266 98 40 chr18 17235770 17235943 -68752991 + MIR SINE MIR 70 252 -10 187 145 0 48 chr18 17236130 17236192 -68752742 + (TGGGGG)n Simple_repeat Simple_repeat 6 64 0 274 339 0 0 chr18 17236197 17236345 -68752589 + G-rich Low_complexity Low_complexity 1 148 0 868 232 110 8 chr18 17236875 17237025 -68751909 + MER2 DNA MER2_type 64 197 -148 2122 139 3 0 chr18 17237025 17237327 -68751607 - AluJo SINE Alu -9 303 1 868 232 110 8 chr18 17237327 17237430 -68751504 + MER2 DNA MER2_type 197 343 -2 2064 85 0 28 chr18 17237671 17237953 -68750981 - AluY SINE Alu -3 308 35 645 236 0 0 chr18 17237988 17238111 -68750823 - FLAM_C SINE Alu -20 123 1 276 223 191 11 chr18 17238888 17238982 -68749952 + L1MB3 LINE L1 6068 6178 -5 1598 156 156 0 chr18 17239501 17239770 -68749164 + AluJo SINE Alu 1 311 -1 751 292 9 23 chr18 17239834 17240053 -68748881 + MIR SINE MIR 47 262 0 465 331 136 19 chr18 17241365 17241740 -68747194 - L2 LINE L2 0 3313 2895 239 310 0 0 chr18 17243175 17243246 -68745688 + L2 LINE L2 3201 3271 -1 393 291 200 6 chr18 17243302 17243477 -68745457 + L3 LINE CR1 549 757 -820 301 277 54 24 chr18 17243518 17243684 -68745250 + L1ME4a LINE L1 5764 5934 -187 458 155 134 10 chr18 17244072 17244169 -68744765 + MIR3 SINE MIR 71 179 -29 2322 88 0 3 chr18 17245061 17245358 -68743576 + AluY SINE Alu 1 296 -15 30 27 0 0 chr18 17245660 17245697 -68743237 + AT_rich Low_complexity Low_complexity 1 37 0 445 351 135 5 chr18 17245697 17245919 -68743015 - MIR SINE MIR -2 260 10 1640 165 6 62 chr18 17245965 17246287 -68742647 - AluJo SINE Alu -8 304 1 262 178 0 0 chr18 17248057 17248102 -68740832 + 5S rRNA rRNA 1 45 -76 259 269 35 48 chr18 17248484 17248629 -68740305 + MER104 DNA Tc2 37 179 -1 2133 144 0 0 chr18 17248640 17248939 -68739995 + AluJb SINE Alu 3 301 -11 2094 113 3 10 chr18 17249004 17249296 -68739638 - AluSg SINE Alu 0 310 21 259 260 0 39 chr18 17249346 17249423 -68739511 + CT-rich Low_complexity Low_complexity 3 76 0 185 0 40 0 chr18 17249702 17249727 -68739207 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1381 263 72 95 chr18 17250256 17251044 -68737890 + L1MC4 LINE L1 7042 7801 -10 1950 163 0 13 chr18 17251514 17251827 -68737107 + AluJb SINE Alu 1 309 -3 2834 91 0 0 chr18 17251973 17252337 -68736597 + THE1B LTR MaLR 1 364 0 1829 154 23 23 chr18 17252392 17252691 -68736243 - AluJb SINE Alu -13 299 1 206 371 98 24 chr18 17252769 17252974 -68735960 + L2 LINE L2 2824 3043 -229 390 298 48 8 chr18 17253062 17253186 -68735748 - L2 LINE L2 -2 3311 3183 390 267 133 15 chr18 17253227 17253362 -68735572 + L2 LINE L2 3162 3312 -1 593 185 8 15 chr18 17254332 17254462 -68734472 + FLAM_C SINE Alu 1 129 -4 313 282 63 42 chr18 17254753 17254895 -68734039 + MIR SINE MIR 23 167 -95 258 143 0 20 chr18 17255626 17255675 -68733259 + AluSp SINE Alu 137 184 -119 1039 234 31 16 chr18 17257389 17257646 -68731288 - MIR SINE MIR 0 262 2 2653 43 0 7 chr18 17257975 17258279 -68730655 - AluY SINE Alu -9 302 1 274 23 47 0 chr18 17258374 17258417 -68730517 + (TG)n Simple_repeat Simple_repeat 2 46 0 513 325 42 0 chr18 17259119 17259285 -68729649 + Tigger8 DNA MER2_type 16 188 -478 206 355 91 0 chr18 17259301 17259411 -68729523 - L2 LINE L2 -3 3269 3150 364 160 21 106 chr18 17259945 17260039 -68728895 - AluJ/FRAM SINE Alu 0 302 217 628 302 11 0 chr18 17260050 17260232 -68728702 - MIR SINE MIR -46 216 33 381 276 20 0 chr18 17260252 17260350 -68728584 + MIR3 SINE MIR 106 205 -3 189 340 187 7 chr18 17261016 17261166 -68727768 - MIR SINE MIR -34 228 52 1911 160 0 3 chr18 17262957 17263251 -68725683 + AluJo SINE Alu 1 293 -19 2317 120 0 0 chr18 17263753 17264061 -68724873 + AluSx SINE Alu 1 308 -4 2341 128 0 0 chr18 17264395 17264707 -68724227 + AluSq SINE Alu 1 312 -1 253 310 52 43 chr18 17265245 17265361 -68723573 - L2 LINE L2 -261 3011 2895 462 278 18 30 chr18 17265556 17265725 -68723209 - L2 LINE L2 -1 3312 3146 2251 75 4 11 chr18 17267447 17267762 -68721172 + AluSc SINE Alu 1 313 0 265 59 0 0 chr18 17267728 17267788 -68721146 + (TAAA)n Simple_repeat Simple_repeat 3 62 0 1870 280 185 22 chr18 17268560 17269985 -68718949 - L2 LINE L2 -16 3297 1643 209 264 146 9 chr18 17270405 17270515 -68718419 - MIR3 SINE MIR -51 157 33 316 271 8 57 chr18 17271119 17271241 -68717693 + L1ME3A LINE L1 6046 6161 -9 326 303 90 13 chr18 17271242 17271397 -68717537 + L2 LINE L2 2694 2860 -454 1970 170 0 0 chr18 17273252 17273558 -68715376 - AluJo SINE Alu -6 306 1 342 277 84 26 chr18 17274484 17274639 -68714295 + MIR3 SINE MIR 43 206 -2 376 325 38 12 chr18 17275422 17275582 -68713352 + MER5B DNA MER1_type 1 164 -14 1759 189 3 3 chr18 17275982 17276288 -68712646 - AluJo SINE Alu -6 306 1 206 226 0 94 chr18 17276590 17276643 -68712291 - L2 LINE L2 0 3272 3225 196 262 155 39 chr18 17276742 17276845 -68712089 + L2 LINE L2 3199 3313 0 243 270 175 15 chr18 17277667 17277804 -68711130 - MIR3 SINE MIR -8 200 42 246 256 160 32 chr18 17280412 17280537 -68708397 + MIR SINE MIR 104 244 -18 222 232 0 18 chr18 17280781 17280837 -68708097 + CT-rich Low_complexity Low_complexity 3 57 0 283 310 81 52 chr18 17282691 17282865 -68706069 - L2 LINE L2 -12 3260 3082 315 238 15 107 chr18 17284012 17284218 -68704716 - L1MC5 LINE L1 -302 7659 7473 183 80 0 0 chr18 17284250 17284275 -68704659 + (TCC)n Simple_repeat Simple_repeat 1 25 0 769 253 180 29 chr18 17284309 17284760 -68704174 - L1MC5 LINE L1 -519 7442 6924 1446 136 21 4 chr18 17284898 17285141 -68703793 + Tigger2 DNA MER2_type 2462 2708 -10 187 222 0 123 chr18 17285252 17285333 -68703601 + L2 LINE L2 3202 3272 0 432 291 11 6 chr18 17285762 17285937 -68702997 + (TG)n Simple_repeat Simple_repeat 1 176 0 233 261 9 0 chr18 17286012 17286127 -68702807 + (TG)n Simple_repeat Simple_repeat 1 116 0 529 201 0 12 chr18 17286153 17286322 -68702612 + (TG)n Simple_repeat Simple_repeat 1 167 0 288 233 14 0 chr18 17286336 17286409 -68702525 + (TG)n Simple_repeat Simple_repeat 2 75 0 763 298 11 0 chr18 17286421 17286612 -68702322 + MIR SINE MIR 67 259 -3 225 326 200 7 chr18 17286682 17286817 -68702117 - MIR SINE MIR -56 206 46 283 312 73 0 chr18 17291582 17291691 -68697243 - MIR3 SINE MIR -25 183 67 1694 189 8 47 chr18 17291705 17291750 -68697184 - MLT1A1 LTR MaLR 0 365 320 1940 166 83 8 chr18 17291750 17292148 -68696786 + MSTA LTR MaLR 1 428 0 1694 189 8 47 chr18 17292148 17292482 -68696452 - MLT1A1 LTR MaLR -45 320 1 244 246 0 0 chr18 17293298 17293359 -68695575 - MIR SINE MIR -48 214 154 214 340 50 57 chr18 17297037 17297196 -68691738 + L2 LINE L2 3079 3236 -36 1765 184 74 41 chr18 17297493 17298234 -68690700 - MER21A LTR ERV1 -6 925 2 1885 167 37 112 chr18 17299097 17299567 -68689367 + MLT1D LTR MaLR 1 505 0 1725 160 3 72 chr18 17299567 17299898 -68689036 + AluJo SINE Alu 1 308 -4 2323 116 3 0 chr18 17299907 17300218 -68688716 - AluSx SINE Alu 0 312 1 1885 167 37 112 chr18 17300218 17300283 -68688651 + MLT1D LTR MaLR 437 505 0 1984 150 7 0 chr18 17300726 17301026 -68687908 - AluJo SINE Alu -10 302 1 229 269 84 42 chr18 17301228 17301395 -68687539 - Charlie7 DNA MER1_type -7 2605 2432 4374 92 13 13 chr18 17301966 17302600 -68686334 - MER51A LTR ERV1 0 634 1 198 0 0 0 chr18 17305312 17305334 -68683600 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 371 307 174 5 chr18 17306392 17306610 -68682324 + L2 LINE L2 3059 3313 0 1064 168 0 25 chr18 17306720 17306917 -68682017 + AluJb SINE Alu 1 192 -120 252 324 104 35 chr18 17307441 17307614 -68681320 - MIR SINE MIR -50 212 28 202 215 15 15 chr18 17307614 17307679 -68681255 + CT-rich Low_complexity Low_complexity 4 68 0 2104 157 48 12 chr18 17308376 17308789 -68680145 + MSTA LTR MaLR 1 428 0 1132 177 53 60 chr18 17309753 17310053 -68678881 - AluJo SINE Alu -4 298 1 2075 134 7 0 chr18 17311350 17311641 -68677293 + AluJo SINE Alu 3 295 -17 263 261 33 43 chr18 17312610 17312702 -68676232 - MIR3 SINE MIR -28 180 90 310 259 24 0 chr18 17313175 17313260 -68675674 + MER5A DNA MER1_type 17 103 -86 215 340 39 0 chr18 17313371 17313474 -68675460 + L2 LINE L2 2652 2758 -556 5521 195 34 16 chr18 17313481 17314342 -68674592 + L1MC1 LINE L1 4330 5174 -1159 2241 135 0 0 chr18 17314342 17314654 -68674280 + AluSx SINE Alu 1 312 0 5521 195 34 16 chr18 17314654 17315741 -68673193 + L1MC1 LINE L1 5174 6319 -14 255 239 15 15 chr18 17316664 17316731 -68672203 - L2 LINE L2 0 3272 3206 1905 194 122 21 chr18 17317672 17318157 -68670777 - LTR48 LTR ERV1 -248 539 6 345 256 168 7 chr18 17318631 17318768 -68670166 - MIR SINE MIR -14 248 90 1094 145 100 90 chr18 17319346 17319636 -68669298 + AluJb SINE Alu 1 293 -9 245 333 15 59 chr18 17320051 17320186 -68668748 - L2 LINE L2 -4 3268 3140 987 154 0 0 chr18 17320738 17320887 -68668047 + FRAM SINE Alu 5 153 -23 271 200 62 15 chr18 17321738 17321803 -68667131 + L1MB5 LINE L1 6098 6165 -9 405 256 120 0 chr18 17321946 17322079 -68666855 - L1M3 LINE L1 -667 5513 5365 186 329 286 12 chr18 17322605 17322766 -68666168 - L2 LINE L2 -1 3312 3108 2690 138 27 35 chr18 17323846 17324148 -68664786 - MER41E LTR ERV1 0 512 214 2344 101 7 0 chr18 17324148 17324454 -68664480 - AluSp SINE Alu -5 308 1 2690 138 27 35 chr18 17324454 17324636 -68664298 - MER41E LTR ERV1 -298 214 32 1012 174 12 81 chr18 17325228 17325475 -68663459 + MER46A DNA MER2_type 6 235 -1 1660 151 65 18 chr18 17327849 17328127 -68660807 + AluJo SINE Alu 1 291 -21 460 261 34 17 chr18 17329506 17329625 -68659309 + AluJb SINE Alu 109 229 -83 455 346 67 54 chr18 17331098 17331413 -68657521 + L3b LINE CR1 1262 1580 -3 278 250 181 75 chr18 17331395 17331555 -68657379 - L3b LINE CR1 -114 1469 1293 * 1955 132 17 10 chr18 17332204 17332499 -68656435 - AluJb SINE Alu -14 298 2 207 0 0 0 chr18 17336506 17336529 -68652405 + (TCTG)n Simple_repeat Simple_repeat 1 23 0 30 45 0 0 chr18 17338794 17338838 -68650096 + AT_rich Low_complexity Low_complexity 1 44 0 21 36 0 0 chr18 17338923 17338951 -68649983 + AT_rich Low_complexity Low_complexity 1 28 0 641 353 62 0 chr18 17338958 17339202 -68649732 - MIR SINE MIR 0 262 4 2282 114 0 13 chr18 17339436 17339751 -68649183 - AluSx SINE Alu -1 311 1 2448 240 49 47 chr18 17340326 17340558 -68648376 - Tigger6a DNA MER2_type -523 1074 844 2482 81 3 0 chr18 17340558 17340867 -68648067 + AluY SINE Alu 2 311 0 2448 240 49 47 chr18 17340867 17341243 -68647691 - Tigger6a DNA MER2_type -753 844 461 1333 38 6 0 chr18 17341243 17341403 -68647531 - L1PA5 LINE L1 -2 6152 5992 2448 240 49 47 chr18 17341403 17341607 -68647327 - Tigger6a DNA MER2_type -1136 461 259 1515 91 24 0 chr18 17341599 17341809 -68647125 + Tigger1 DNA MER2_type 909 1123 -1295 * 580 232 0 8 chr18 17341809 17341934 -68647000 - Tigger6a DNA MER2_type -825 258 135 14812 131 14 20 chr18 17341961 17342196 -68646738 + Tigger1 DNA MER2_type 21 256 -2162 3273 97 15 7 chr18 17342196 17342658 -68646276 - L1PB2 LINE L1 -4 6147 5682 14812 131 14 20 chr18 17342658 17344041 -68644893 + Tigger1 DNA MER2_type 256 1620 -798 1551 200 0 35 chr18 17344041 17344351 -68644583 + AluJo SINE Alu 1 299 -13 14812 131 14 20 chr18 17344351 17345145 -68643789 + Tigger1 DNA MER2_type 1620 2418 0 482 236 0 0 chr18 17345150 17345256 -68643678 - Tigger6a DNA MER2_type -976 107 2 374 272 120 25 chr18 17345298 17345456 -68643478 + MIR3 SINE MIR 34 206 -2 1074 137 27 0 chr18 17345516 17345699 -68643235 + L1PB2 LINE L1 5964 6151 0 1997 96 78 0 chr18 17346273 17346544 -68642390 + AluSg SINE Alu 1 292 -18 611 244 103 38 chr18 17349205 17349418 -68639516 + MIR SINE MIR 30 256 -6 1710 155 10 41 chr18 17350819 17351139 -68637795 - AluJo SINE Alu 0 311 1 1982 168 0 3 chr18 17351866 17352175 -68636759 - AluJo SINE Alu -4 308 1 971 285 79 53 chr18 17352693 17352758 -68636176 - L1MEd LINE L1 -4862 1257 1195 2475 63 13 0 chr18 17352758 17353058 -68635876 - AluY SINE Alu -7 304 1 971 285 79 53 chr18 17353058 17353887 -68635047 - L1MEd LINE L1 -4924 1195 441 384 351 106 43 chr18 17353932 17354308 -68634626 - L1MEd LINE L1 -5717 402 3 1995 143 0 17 chr18 17354503 17354804 -68634130 + AluSx SINE Alu 1 296 -16 1883 159 7 0 chr18 17355595 17355885 -68633049 + AluJo SINE Alu 1 292 -20 244 278 122 35 chr18 17356944 17357059 -68631875 + MIR SINE MIR 94 218 -44 227 303 13 0 chr18 17358118 17358194 -68630740 + MLT1E3 LTR MaLR 1 77 -577 499 223 111 31 chr18 17358220 17358558 -68630376 + MLT1E3 LTR MaLR 102 529 -125 345 143 0 121 chr18 17359573 17359664 -68629270 - MLT1H LTR MaLR 0 549 470 318 322 131 16 chr18 17360177 17360360 -68628574 + MIR SINE MIR 35 238 -24 21 0 0 0 chr18 17361068 17361089 -68627845 + AT_rich Low_complexity Low_complexity 1 21 0 262 330 104 35 chr18 17361707 17361880 -68627054 - MIR SINE MIR -50 212 28 202 215 15 15 chr18 17361880 17361945 -68626989 + CT-rich Low_complexity Low_complexity 4 68 0 191 253 120 27 chr18 17363266 17363341 -68625593 - MIR SINE MIR -34 228 147 2138 137 0 0 chr18 17363344 17363636 -68625298 - AluSx SINE Alu -20 292 1 398 232 20 0 chr18 17363879 17363978 -68624956 - MER5A DNA MER1_type -80 109 9 1275 168 102 16 chr18 17366367 17366611 -68622323 + AluJo SINE Alu 17 281 -31 22 0 0 0 chr18 17366611 17366633 -68622301 + AT_rich Low_complexity Low_complexity 1 22 0 287 195 177 44 chr18 17368085 17368198 -68620736 - L2 LINE L2 -1 3312 3185 4942 255 39 29 chr18 17369701 17372268 -68616666 - L1ME1 LINE L1 -5 6161 3620 455 89 0 114 chr18 17372268 17372322 -68616612 - Tigger3(Golem) DNA MER2_type -82 2956 2912 2229 119 3 45 chr18 17372322 17372674 -68616260 - MER1B DNA MER1_type 0 337 1 455 89 0 114 chr18 17372674 17372698 -68616236 - Tigger3(Golem) DNA MER2_type -126 2912 2887 323 237 0 0 chr18 17372699 17372758 -68616176 - Tigger3(Golem) DNA MER2_type -2970 59 1 4942 255 39 29 chr18 17372758 17372801 -68616133 - L1ME1 LINE L1 -2546 3620 3579 213 39 0 0 chr18 17372801 17372827 -68616107 + (TG)n Simple_repeat Simple_repeat 1 26 0 4942 255 39 29 chr18 17372827 17373446 -68615488 - L1ME1 LINE L1 -2587 3579 2888 1787 159 7 3 chr18 17373550 17373846 -68615088 - AluSx SINE Alu -15 297 1 354 256 103 73 chr18 17376154 17376388 -68612546 + L1ME LINE L1 5541 5781 -340 1488 167 0 72 chr18 17376792 17377110 -68611824 + AluJo SINE Alu 2 296 -16 347 283 40 84 chr18 17378746 17378972 -68609962 + MIR SINE MIR 27 242 -20 273 146 12 24 chr18 17379907 17379989 -68608945 + L1ME4a LINE L1 6036 6116 -5 207 318 15 0 chr18 17381013 17381079 -68607855 + MIR SINE MIR 78 144 -118 1391 128 0 0 chr18 17381408 17381604 -68607330 - AluJo SINE Alu -32 280 85 6883 163 146 30 chr18 17382410 17383903 -68605031 - MER52A LTR ERV1 0 1755 1 391 309 61 12 chr18 17384847 17385012 -68603922 + MIR SINE MIR 8 180 -82 2024 172 90 0 chr18 17386785 17387175 -68601759 - MSTB LTR MaLR -1 425 1 203 250 0 0 chr18 17389132 17389172 -68599762 + L2 LINE L2 3264 3303 -10 27 29 0 0 chr18 17389262 17389296 -68599638 + AT_rich Low_complexity Low_complexity 1 34 0 2232 204 82 2 chr18 17389792 17390282 -68598652 + L1MC3 LINE L1 7087 7615 -170 650 166 45 2 chr18 17391771 17391904 -68597030 - L1MC3 LINE L1 -458 7537 7195 1698 172 3 13 chr18 17392035 17392343 -68596591 + AluJo SINE Alu 1 305 -7 2160 103 0 0 chr18 17392434 17392725 -68596209 - AluY SINE Alu -20 291 1 313 237 0 136 chr18 17394502 17394679 -68594255 + L1MC4 LINE L1 6551 6703 -1339 379 261 109 7 chr18 17394740 17394878 -68594056 + MIR3 SINE MIR 33 184 -24 188 283 33 0 chr18 17396020 17396080 -68592854 + MIR SINE MIR 82 143 -65 341 212 44 88 chr18 17397148 17397261 -68591673 + MIR SINE MIR 84 191 -71 317 190 80 57 chr18 17397461 17397587 -68591347 - L1MA7 LINE L1 0 6312 6176 * 823 172 37 6 chr18 17397586 17397749 -68591185 - L1MA9 LINE L1 -231 6081 5914 24 0 0 0 chr18 17398902 17398926 -68590008 + AT_rich Low_complexity Low_complexity 1 24 0 1109 192 107 4 chr18 17398956 17399190 -68589744 - AluJo SINE Alu -39 273 16 225 0 0 0 chr18 17399605 17399630 -68589304 + (A)n Simple_repeat Simple_repeat 1 25 0 2253 89 0 0 chr18 17401393 17401686 -68587248 - AluSc SINE Alu -16 293 1 190 237 132 0 chr18 17401986 17402062 -68586872 - MIR SINE MIR -74 134 49 21 82 0 0 chr18 17402768 17402817 -68586117 + AT_rich Low_complexity Low_complexity 1 49 0 784 239 133 79 chr18 17403001 17403028 -68585906 - MLT1J LTR MaLR -74 541 517 2115 98 3 35 chr18 17403028 17403345 -68585589 + AluSx SINE Alu 1 307 -5 784 239 133 79 chr18 17403345 17403692 -68585242 - MLT1J LTR MaLR -98 517 38 2073 122 0 3 chr18 17404627 17404938 -68583996 + AluSx SINE Alu 1 310 -2 240 236 0 18 chr18 17405778 17405833 -68583101 + T-rich Low_complexity Low_complexity 3 56 0 1954 152 0 3 chr18 17405835 17406144 -68582790 - AluJo SINE Alu -3 309 2 2294 89 0 0 chr18 17406657 17406960 -68581974 - AluY SINE Alu -8 303 1 776 225 99 5 chr18 17407046 17407237 -68581697 - MER6B DNA MER2_type 0 210 2 1885 135 0 0 chr18 17408104 17408425 -68580509 - AluSx SINE Alu 0 325 5 971 94 0 0 chr18 17408427 17408555 -68580379 - AluSq/x SINE Alu -176 137 10 219 292 69 14 chr18 17409456 17409528 -68579406 + L2 LINE L2 3141 3216 -56 6751 78 7 7 chr18 17410105 17411096 -68577838 - L1PB1 LINE L1 -2 6149 5158 2416 68 3 0 chr18 17411166 17411476 -68577458 + AluY SINE Alu 1 311 0 225 0 0 0 chr18 17413852 17413877 -68575057 + (T)n Simple_repeat Simple_repeat 1 25 0 261 0 0 0 chr18 17414006 17414035 -68574899 + (T)n Simple_repeat Simple_repeat 1 29 0 2295 89 0 0 chr18 17414088 17414390 -68574544 + AluY SINE Alu 1 302 -9 2113 147 14 3 chr18 17416142 17416497 -68572437 - MER46B DNA MER2_type 0 236 3 245 376 0 9 chr18 17416987 17417096 -68571838 + (TG)n Simple_repeat Simple_repeat 1 108 0 1611 173 7 16 chr18 17417882 17418189 -68570745 - AluJo SINE Alu -3 309 6 24 77 0 0 chr18 17418383 17418435 -68570499 + AT_rich Low_complexity Low_complexity 1 52 0 378 312 41 94 chr18 17419352 17419746 -68569188 + L2 LINE L2 2882 3254 -18 2120 109 7 0 chr18 17421305 17421609 -68567325 + AluSx SINE Alu 1 306 -6 1351 154 109 8 chr18 17421821 17422068 -68566866 + AluSx SINE Alu 39 310 -2 2084 151 0 16 chr18 17424185 17424502 -68564432 - AluSx SINE Alu 0 312 1 543 228 0 0 chr18 17425243 17425423 -68563511 + (TG)n Simple_repeat Simple_repeat 1 180 0 285 250 21 5 chr18 17425461 17425657 -68563277 + (TG)n Simple_repeat Simple_repeat 1 199 0 411 68 0 0 chr18 17426690 17426749 -68562185 + (TG)n Simple_repeat Simple_repeat 2 60 0 569 243 83 35 chr18 17426832 17427001 -68561933 - MER5B DNA MER1_type -1 177 1 282 291 95 40 chr18 17427126 17427274 -68561660 - MIR SINE MIR -59 203 48 714 224 127 13 chr18 17427489 17427717 -68561217 + MER112 DNA MER1_type 1 254 -6 22 70 0 0 chr18 17428268 17428311 -68560623 + AT_rich Low_complexity Low_complexity 1 43 0 2087 142 16 0 chr18 17428319 17428622 -68560312 + AluSx SINE Alu 1 308 -4 294 179 0 0 chr18 17428834 17428890 -68560044 + (TCCA)n Simple_repeat Simple_repeat 2 57 0 525 200 33 0 chr18 17428925 17429015 -68559919 - FLAM_A SINE Alu -27 115 23 968 200 0 0 chr18 17429077 17429242 -68559692 - FAM SINE Alu -10 165 1 1473 167 97 4 chr18 17429692 17429950 -68558984 + AluSx SINE Alu 1 282 -30 207 0 0 0 chr18 17430740 17430763 -68558171 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2355 78 10 0 chr18 17430770 17431077 -68557857 - AluSg SINE Alu 0 310 1 321 315 132 0 chr18 17432968 17433225 -68555709 - L1ME3A LINE L1 -38 6132 5842 228 35 0 0 chr18 17437310 17437339 -68551595 + (T)n Simple_repeat Simple_repeat 1 29 0 2313 106 0 0 chr18 17437392 17437694 -68551240 + AluY SINE Alu 1 302 -9 2165 146 11 3 chr18 17439443 17439799 -68549135 - MER46B DNA MER2_type 0 236 3 245 376 0 9 chr18 17440289 17440398 -68548536 + (TG)n Simple_repeat Simple_repeat 1 108 0 1766 174 7 16 chr18 17441181 17441491 -68547443 - AluJo SINE Alu 0 312 6 24 77 0 0 chr18 17441685 17441737 -68547197 + AT_rich Low_complexity Low_complexity 1 52 0 399 312 41 94 chr18 17442654 17443048 -68545886 + L2 LINE L2 2882 3254 -18 2258 109 7 0 chr18 17444607 17444910 -68544024 + AluSx SINE Alu 1 305 -7 1393 146 109 8 chr18 17445122 17445369 -68543565 + AluSx SINE Alu 39 310 -2 1004 169 45 0 chr18 17445581 17445758 -68543176 - MER5A DNA MER1_type -4 185 1 259 270 63 0 chr18 17445807 17445870 -68543064 - L2 LINE L2 -2 3311 3245 2104 148 0 16 chr18 17447396 17447713 -68541221 - AluSx SINE Alu 0 312 1 543 228 0 0 chr18 17448453 17448633 -68540301 + (TG)n Simple_repeat Simple_repeat 1 180 0 249 281 10 10 chr18 17448671 17448767 -68540167 + (TG)n Simple_repeat Simple_repeat 1 96 0 289 188 24 0 chr18 17448779 17448864 -68540070 + (TG)n Simple_repeat Simple_repeat 1 87 0 411 68 0 0 chr18 17449886 17449945 -68538989 + (TG)n Simple_repeat Simple_repeat 2 60 0 569 243 83 35 chr18 17450028 17450197 -68538737 - MER5B DNA MER1_type -1 177 1 282 291 95 40 chr18 17450322 17450470 -68538464 - MIR SINE MIR -59 203 48 714 224 127 13 chr18 17450685 17450913 -68538021 + MER112 DNA MER1_type 1 254 -6 22 70 0 0 chr18 17451464 17451507 -68537427 + AT_rich Low_complexity Low_complexity 1 43 0 2087 142 16 0 chr18 17451515 17451818 -68537116 + AluSx SINE Alu 1 308 -4 294 179 0 0 chr18 17452030 17452086 -68536848 + (TCCA)n Simple_repeat Simple_repeat 2 57 0 525 200 33 0 chr18 17452121 17452211 -68536723 - FLAM_A SINE Alu -27 115 23 968 200 0 0 chr18 17452273 17452438 -68536496 - FAM SINE Alu -10 165 1 213 39 0 0 chr18 17453193 17453219 -68535715 + (A)n Simple_repeat Simple_repeat 1 26 0 3326 246 86 54 chr18 17453270 17454043 -68534891 - L1MEc LINE L1 -2508 3707 2961 846 176 0 0 chr18 17454043 17454174 -68534760 - FLAM_C SINE Alu -2 131 1 3326 246 86 54 chr18 17454174 17455335 -68533599 - L1MEc LINE L1 -3254 2961 1733 1925 269 65 20 chr18 17455364 17456032 -68532902 - L1M4c LINE L1 -4451 2687 1834 216 0 0 0 chr18 17456032 17456056 -68532878 + (TC)n Simple_repeat Simple_repeat 1 24 0 1925 269 65 20 chr18 17456056 17456321 -68532613 - L1M4c LINE L1 -5304 1834 1582 7147 191 36 38 chr18 17456333 17457999 -68530935 - L1M4c LINE L1 -5179 1680 18 2490 73 0 3 chr18 17458012 17458315 -68530619 - AluY SINE Alu -9 302 1 659 220 0 25 chr18 17458520 17458638 -68530296 - FLAM_A SINE Alu -25 117 3 22 35 0 0 chr18 17458638 17458667 -68530267 + AT_rich Low_complexity Low_complexity 1 29 0 221 315 54 0 chr18 17458899 17458991 -68529943 - MIR SINE MIR -73 135 39 1586 126 14 0 chr18 17459744 17460033 -68528901 + L1PA16 LINE L1 5237 5529 -637 1422 64 0 0 chr18 17460033 17460206 -68528728 + AluY SINE Alu 137 309 -2 3861 149 12 6 chr18 17460206 17460852 -68528082 + L1PA16 LINE L1 5514 6163 -3 836 87 0 17 chr18 17461018 17461133 -68527801 - AluSx SINE Alu -8 301 189 1018 118 7 0 chr18 17461135 17461271 -68527663 - AluSx SINE Alu -176 137 1 203 156 44 0 chr18 17461285 17461330 -68527604 + A-rich Low_complexity Low_complexity 2 48 0 953 241 24 24 chr18 17461951 17462200 -68526734 + MIR SINE MIR 13 261 -1 1813 183 0 0 chr18 17463752 17464041 -68524893 - AluJo SINE Alu -23 289 1 426 165 35 0 chr18 17464471 17464556 -68524378 - MER5A DNA MER1_type -95 94 7 327 212 45 0 chr18 17464572 17464638 -68524296 - MIR SINE MIR -71 191 123 684 239 74 19 chr18 17465662 17465893 -68523041 + MIR SINE MIR 7 252 -10 5128 61 0 9 chr18 17465945 17466597 -68522337 - L1PA8 LINE L1 0 6172 5527 1243 50 0 33 chr18 17466597 17466779 -68522155 + L1P3 LINE L1 5301 5476 -678 345 47 0 0 chr18 17468039 17468082 -68520852 + (TG)n Simple_repeat Simple_repeat 2 44 0 2027 133 3 29 chr18 17468214 17468529 -68520405 + AluSx SINE Alu 1 307 -5 333 0 0 0 chr18 17468789 17468826 -68520108 + (T)n Simple_repeat Simple_repeat 1 37 0 22 35 0 0 chr18 17468832 17468861 -68520073 + GC_rich Low_complexity Low_complexity 1 29 0 793 201 88 6 chr18 17470489 17470648 -68518286 - FAM SINE Alu -3 172 1 314 291 13 0 chr18 17470649 17470728 -68518206 + MIR SINE MIR 66 145 -117 2139 128 3 0 chr18 17470884 17471188 -68517746 - AluSx SINE Alu -7 305 1 741 142 0 9 chr18 17477723 17477836 -68511098 - FLAM_C SINE Alu -11 132 21 330 321 95 32 chr18 17478250 17478723 -68510211 + L1MC/D LINE L1 5258 5760 -2048 261 0 0 0 chr18 17480157 17480186 -68508748 + (A)n Simple_repeat Simple_repeat 1 29 0 30 0 0 0 chr18 17480196 17480226 -68508708 + AT_rich Low_complexity Low_complexity 1 30 0 467 114 0 0 chr18 17481037 17481107 -68507827 - L1MB1 LINE L1 -1 6167 6098 1525 148 21 81 chr18 17481523 17481855 -68507079 + AluJo SINE Alu 1 312 0 2191 98 3 0 chr18 17481857 17482154 -68506780 + AluSg1 SINE Alu 1 298 -11 361 161 16 0 chr18 17482956 17483018 -68505916 + MER116 DNA Mariner 3 65 -15 617 260 164 49 chr18 17483350 17483410 -68505524 + Charlie8 DNA MER1_type 36 88 -2329 2061 107 33 3 chr18 17483410 17483709 -68505225 + AluSx SINE Alu 1 308 -4 617 260 164 49 chr18 17483709 17484075 -68504859 + Charlie8 DNA MER1_type 88 511 -1906 1757 166 0 7 chr18 17485264 17485553 -68503381 - AluJo SINE Alu -25 287 1 474 275 23 0 chr18 17485657 17485788 -68503146 - MARNA DNA Mariner -239 347 214 24 0 0 0 chr18 17486045 17486069 -68502865 + AT_rich Low_complexity Low_complexity 1 24 0 180 146 24 24 chr18 17487077 17487118 -68501816 + MIR SINE MIR 109 149 -113 530 283 119 13 chr18 17487133 17487359 -68501575 + MER112 DNA MER1_type 5 254 -6 6714 195 26 72 chr18 17487622 17488068 -68500866 + L1 LINE L1 3322 3787 -2359 2010 115 3 0 chr18 17488068 17488354 -68500580 + AluSx SINE Alu 1 287 -25 6714 195 26 72 chr18 17488354 17488575 -68500359 + L1 LINE L1 3787 4017 -2129 7740 147 78 123 chr18 17488575 17490412 -68498522 - MER52A LTR ERV1 0 1755 1 6714 195 26 72 chr18 17490412 17491541 -68497393 + L1 LINE L1 4017 5036 -1110 986 234 98 11 chr18 17491543 17491829 -68497105 - MLT1A1 LTR MaLR -1 364 54 342 0 0 0 chr18 17492354 17492392 -68496542 + (TG)n Simple_repeat Simple_repeat 1 38 0 919 234 62 9 chr18 17492589 17492816 -68496118 + MER8 DNA MER2_type 1 239 0 2115 118 0 13 chr18 17492908 17493221 -68495713 - AluSx SINE Alu -2 310 2 2123 125 0 0 chr18 17493223 17493520 -68495414 - AluSq SINE Alu -16 297 1 200 59 29 0 chr18 17493528 17493562 -68495372 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 2427 72 0 0 chr18 17494006 17494311 -68494623 + AluSx SINE Alu 1 305 -7 312 291 13 0 chr18 17494467 17494546 -68494388 - MIR SINE MIR -117 145 66 768 201 88 6 chr18 17494547 17494706 -68494228 + FAM SINE Alu 1 172 -3 357 317 97 26 chr18 17496174 17496401 -68492533 + L1ME4a LINE L1 5715 5957 -164 2217 75 0 23 chr18 17496427 17496733 -68492201 + AluY SINE Alu 1 299 -12 579 133 33 11 chr18 17497603 17497693 -68491241 + FLAM_C SINE Alu 25 116 -27 283 192 23 41 chr18 17497694 17497866 -68491068 + (TAGA)n Simple_repeat Simple_repeat 4 172 0 185 65 32 0 chr18 17498280 17498311 -68490623 + (TA)n Simple_repeat Simple_repeat 2 33 0 2534 39 7 3 chr18 17501319 17501626 -68487308 + AluY SINE Alu 1 308 -3 216 0 0 0 chr18 17501626 17501650 -68487284 + (T)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr18 17501772 17501794 -68487140 + GC_rich Low_complexity Low_complexity 1 22 0 234 0 0 0 chr18 17501814 17501840 -68487094 + (A)n Simple_repeat Simple_repeat 1 26 0 180 0 0 0 chr18 17501840 17501860 -68487074 + (TA)n Simple_repeat Simple_repeat 2 21 0 1047 119 13 6 chr18 17502301 17502460 -68486474 + FRAM SINE Alu 1 157 -19 313 128 0 0 chr18 17503699 17503746 -68485188 + AluSg/x SINE Alu 85 131 -169 1656 151 62 7 chr18 17503750 17504041 -68484893 + AluSx SINE Alu 1 307 -5 252 0 0 0 chr18 17509431 17509459 -68479475 + (CTG)n Simple_repeat Simple_repeat 2 29 0 345 345 64 25 chr18 17512290 17512493 -68476441 + L3 LINE CR1 1331 1541 -36 279 294 166 0 chr18 17512514 17512677 -68476257 + L1M4 LINE L1 4207 4396 -1750 21 36 0 0 chr18 17514297 17514325 -68474609 + AT_rich Low_complexity Low_complexity 1 28 0 197 342 99 27 chr18 17514647 17514758 -68474176 + MIR SINE MIR 75 193 -69 2188 93 10 3 chr18 17514833 17515134 -68473800 + AluSc SINE Alu 1 303 -6 2113 68 0 11 chr18 17515256 17515535 -68473399 + AluY SINE Alu 26 301 -10 7612 192 37 38 chr18 17515548 17517213 -68471721 + L1M4b LINE L1 18 1680 -5179 2045 269 65 22 chr18 17517223 17517491 -68471443 + L1M4b LINE L1 1580 1835 -5303 234 0 0 0 chr18 17517491 17517517 -68471417 + (GA)n Simple_repeat Simple_repeat 1 26 0 2045 269 65 22 chr18 17517517 17518201 -68470733 + L1M4b LINE L1 1835 2702 -4436 3505 236 89 57 chr18 17518214 17519376 -68469558 + L1MEc LINE L1 1733 2960 -3255 818 177 0 0 chr18 17519376 17519506 -68469428 + FLAM_C SINE Alu 2 131 -2 3505 236 89 57 chr18 17519506 17520279 -68468655 + L1MEc LINE L1 2960 3707 -2508 256 268 73 0 chr18 17520666 17520748 -68468186 - L1MC4 LINE L1 -1340 6702 6615 27 62 0 0 chr18 17520831 17520879 -68468055 + AT_rich Low_complexity Low_complexity 1 48 0 1650 192 3 0 chr18 17521099 17521407 -68467527 + AluJb SINE Alu 1 309 -3 225 0 0 0 chr18 17527057 17527082 -68461852 + (CTG)n Simple_repeat Simple_repeat 2 26 0 324 345 64 25 chr18 17529912 17530115 -68458819 + L3 LINE CR1 1331 1541 -36 295 294 166 0 chr18 17530136 17530299 -68458635 + L1MEc LINE L1 4276 4465 -1750 21 36 0 0 chr18 17531919 17531947 -68456987 + AT_rich Low_complexity Low_complexity 1 28 0 182 358 159 26 chr18 17532229 17532380 -68456554 + MIR SINE MIR 23 193 -69 2364 93 0 0 chr18 17532454 17532756 -68456178 + AluY SINE Alu 1 302 -9 1948 100 8 0 chr18 17532878 17533137 -68455797 + AluSx SINE Alu 26 286 -26 1747 83 0 0 chr18 17533275 17533492 -68455442 + AluSq SINE Alu 72 288 -25 4467 35 6 0 chr18 17533492 17534008 -68454926 + HERV17 LTR ERV1 5501 6019 -2607 294 77 0 0 chr18 17534001 17534040 -68454894 + HERV17 LTR ERV1 7510 7548 -1078 * 2492 48 0 0 chr18 17534030 17534322 -68454612 + HERV17 LTR ERV1 8335 8626 0 2711 40 3 6 chr18 17534322 17534649 -68454285 + LTR17 LTR ERV1 1 326 -454 261 0 0 0 chr18 17534649 17534678 -68454256 + (A)n Simple_repeat Simple_repeat 1 29 0 29 0 0 0 chr18 17534688 17534717 -68454217 + AT_rich Low_complexity Low_complexity 1 29 0 2066 134 0 3 chr18 17535531 17535829 -68453105 - AluSc SINE Alu -12 297 1 598 258 99 39 chr18 17536922 17537155 -68451779 - L1MC4 LINE L1 -402 7640 7394 1521 182 143 53 chr18 17537163 17537299 -68451635 - LTR2B LTR ERV1 0 490 368 2609 49 0 3 chr18 17537299 17537603 -68451331 - AluY SINE Alu -8 303 1 1521 182 143 53 chr18 17537603 17537709 -68451225 - LTR2B LTR ERV1 -122 368 273 276 53 0 0 chr18 17537709 17537747 -68451187 + (CAGAA)n Simple_repeat Simple_repeat 1 38 0 1521 182 143 53 chr18 17537747 17537921 -68451013 - LTR2B LTR ERV1 -217 273 35 22 0 0 0 chr18 17538394 17538416 -68450518 + AT_rich Low_complexity Low_complexity 1 22 0 2143 75 26 62 chr18 17538513 17538818 -68450116 - AluSp SINE Alu -19 294 1 465 278 44 83 chr18 17541442 17541694 -68447240 + MIR SINE MIR 21 262 0 2048 137 0 3 chr18 17542513 17542813 -68446121 + AluSx SINE Alu 1 299 -13 1593 92 0 9 chr18 17542815 17543032 -68445902 + AluY SINE Alu 1 215 -96 225 0 0 0 chr18 17543540 17543565 -68445369 + (A)n Simple_repeat Simple_repeat 1 25 0 2004 128 4 0 chr18 17545594 17545895 -68443039 + AluSq SINE Alu 1 302 0 1689 144 6 98 chr18 17545909 17546236 -68442698 + AluJo SINE Alu 4 300 -2 1190 234 224 8 chr18 17546251 17546725 -68442209 + L2 LINE L2 1766 2341 -973 1881 176 11 26 chr18 17546731 17547078 -68441856 - MER7A DNA MER2_type -6 340 1 1734 280 130 43 chr18 17547078 17547948 -68440986 + L2 LINE L2 2342 3293 -20 2246 93 0 7 chr18 17548869 17549160 -68439774 + AluSp SINE Alu 1 289 -24 724 117 0 25 chr18 17549322 17549442 -68439492 + LTR9B LTR ERV1 445 561 -83 22 35 0 0 chr18 17549529 17549558 -68439376 + AT_rich Low_complexity Low_complexity 1 29 0 1099 79 0 0 chr18 17549727 17549867 -68439067 + AluSp/q SINE Alu 164 303 -10 2066 134 0 3 chr18 17550569 17550867 -68438067 - AluSc SINE Alu -12 297 1 598 258 99 39 chr18 17553444 17553677 -68435257 - L1MC4 LINE L1 -402 7640 7394 1497 178 143 59 chr18 17553685 17553824 -68435110 - LTR2B LTR ERV1 0 490 364 2632 53 0 0 chr18 17553824 17554127 -68434807 - AluY SINE Alu -8 303 1 1497 178 143 59 chr18 17554127 17554233 -68434701 - LTR2B LTR ERV1 -126 364 268 276 53 0 0 chr18 17554233 17554271 -68434663 + (CAGAA)n Simple_repeat Simple_repeat 1 38 0 1497 178 143 59 chr18 17554271 17554445 -68434489 - LTR2B LTR ERV1 -222 268 35 22 0 0 0 chr18 17554918 17554940 -68433994 + AT_rich Low_complexity Low_complexity 1 22 0 2163 72 26 62 chr18 17555037 17555343 -68433591 - AluSp SINE Alu -18 295 1 465 278 44 83 chr18 17557966 17558218 -68430716 + MIR SINE MIR 21 262 0 2076 133 0 3 chr18 17559038 17559338 -68429596 + AluSx SINE Alu 1 299 -13 2250 121 0 0 chr18 17559340 17559646 -68429288 + AluSx SINE Alu 1 306 -6 727 212 88 0 chr18 17560172 17560309 -68428625 + FAM SINE Alu 1 149 -36 21 36 0 0 chr18 17560317 17560345 -68428589 + AT_rich Low_complexity Low_complexity 1 28 0 2196 96 10 13 chr18 17560867 17561168 -68427766 + AluSx SINE Alu 1 300 -12 2507 217 102 34 chr18 17561180 17561811 -68427123 + L1MC2 LINE L1 2337 3057 -3089 4443 154 21 35 chr18 17561811 17562601 -68426333 + MER4E LTR ERV1 1 779 0 2507 217 102 34 chr18 17562601 17562933 -68426001 + L1MC2 LINE L1 3057 3365 -2781 2433 116 57 44 chr18 17562945 17563396 -68425538 + LTR56 LTR ERV1 8 467 0 1318 229 71 47 chr18 17563399 17563866 -68425068 + L1MC2 LINE L1 3371 3848 -2298 554 165 21 0 chr18 17563892 17563989 -68424945 + LTR59 LTR ERV1 4 102 -495 2390 219 70 57 chr18 17564001 17564715 -68424219 + MER50 LTR ERV1 12 734 0 1634 134 39 42 chr18 17564716 17564879 -68424055 + LTR59 LTR ERV1 122 285 -312 2317 196 183 108 chr18 17564879 17565828 -68423106 + LTR28 LTR ERV1 1 1020 0 1634 134 39 42 chr18 17565828 17565971 -68422963 + LTR59 LTR ERV1 285 427 -170 746 199 44 0 chr18 17565959 17566095 -68422839 + LTR34 LTR ERV1 558 699 0 * 1584 177 42 82 chr18 17566095 17566547 -68422387 + L1MC2 LINE L1 3845 4278 -1868 40654 67 16 3 chr18 17566558 17572625 -68416309 + L1PA5 LINE L1 11 6151 -3 1109 225 96 60 chr18 17572616 17573083 -68415851 + L1MC2 LINE L1 4252 4735 -1411 * 595 213 53 18 chr18 17573070 17573239 -68415695 + L1MC2 LINE L1 5089 5263 -883 * 486 189 273 8 chr18 17573242 17573374 -68415560 + Tigger3(Golem) DNA MER2_type 1 167 -2862 * 2816 123 306 8 chr18 17573371 17573962 -68414972 + Tigger3(Golem) DNA MER2_type 2263 3029 0 1937 141 41 3 chr18 17573962 17574302 -68414632 + L1MC2 LINE L1 5267 5619 -725 864 133 192 0 chr18 17574302 17574453 -68414481 + AluSg/x SINE Alu 122 301 -9 1519 151 64 4 chr18 17574454 17574719 -68414215 + L1MC2 LINE L1 5622 5902 -442 2353 93 3 0 chr18 17574821 17575122 -68413812 + AluSx SINE Alu 1 302 -10 3400 120 51 83 chr18 17575222 17576004 -68412930 + L1MA4 LINE L1 5533 6289 -11 2396 70 10 0 chr18 17577927 17578228 -68410706 + AluSg SINE Alu 3 306 -4 557 258 163 34 chr18 17578484 17578693 -68410241 - MIR SINE MIR 0 262 27 1737 204 3 8 chr18 17579229 17579581 -68409353 + MLT2C1 LTR ERVL 1 350 -47 240 188 0 43 chr18 17579608 17579677 -68409257 + MLT2C1 LTR ERVL 455 520 0 626 309 92 9 chr18 17579677 17580014 -68408920 + ERVL-C1 LTR ERVL 1 365 -5399 1130 76 14 0 chr18 17580014 17580159 -68408775 + AluSg/x SINE Alu 161 307 -3 1276 223 35 20 chr18 17580163 17580588 -68408346 + ERVL-C1 LTR ERVL 365 868 -4896 * 6970 190 40 11 chr18 17580586 17581852 -68407082 + ERVL-C1 LTR ERVL 1404 2791 -2973 2451 169 47 0 chr18 17581852 17582296 -68406638 + MLT1C LTR MaLR 1 465 -2 6970 190 40 11 chr18 17582296 17582941 -68405993 + ERVL-C1 LTR ERVL 2791 3415 -2349 324 288 108 27 chr18 17582965 17583076 -68405858 + MIR SINE MIR 13 132 -130 328 306 30 37 chr18 17584481 17584615 -68404319 + MIR3 SINE MIR 70 202 -6 1299 242 62 14 chr18 17584779 17585147 -68403787 - MLT1E LTR MaLR -8 585 200 713 105 0 0 chr18 17585569 17585664 -68403270 + AluJ/FLAM SINE Alu 5 99 -213 1882 143 52 27 chr18 17586102 17586467 -68402467 - THE1C LTR MaLR 0 375 2 868 204 19 24 chr18 17586885 17587091 -68401843 - MER3 DNA MER1_type -4 205 1 1851 142 24 3 chr18 17587658 17587946 -68400988 + 7SLRNA srpRNA srpRNA 21 314 -6 212 229 14 29 chr18 17587950 17588020 -68400914 + (TATATG)n Simple_repeat Simple_repeat 2 70 0 284 267 91 68 chr18 17588042 17588263 -68400671 + L1ME LINE L1 5619 5844 -277 687 179 8 0 chr18 17589157 17589274 -68399660 + FRAM SINE Alu 33 150 -26 414 0 0 0 chr18 17589275 17589321 -68399613 + (TG)n Simple_repeat Simple_repeat 2 47 0 1734 187 33 17 chr18 17590241 17590600 -68398334 - MLT1A1 LTR MaLR 0 365 1 233 278 52 10 chr18 17590674 17590771 -68398163 - HAL1b LINE L1 -845 503 403 2107 124 10 0 chr18 17591651 17591957 -68396977 - AluSx SINE Alu -3 309 1 1800 192 60 143 chr18 17592078 17592563 -68396371 - LTR8A LTR ERV1 0 727 326 2162 145 0 0 chr18 17592563 17592866 -68396068 + AluSx SINE Alu 1 303 -9 1800 192 60 143 chr18 17592866 17593142 -68395792 - LTR8A LTR ERV1 -401 326 29 1246 260 73 48 chr18 17593269 17593865 -68395069 - L2 LINE L2 0 3313 2708 1048 222 149 71 chr18 17594396 17594846 -68394088 + MER21B LTR ERV1 5 489 -374 340 190 51 51 chr18 17594875 17594999 -68393935 - LTR26E LTR ERV1 -1 610 485 3160 83 9 7 chr18 17594999 17595432 -68393502 - MER57B LTR ERV1 0 434 1 1441 77 128 26 chr18 17595433 17595667 -68393267 - MER57B-int LTR ERV1 -1 7536 7279 674 108 17 33 chr18 17595667 17595787 -68393147 - LTR54B LTR ERV1 -367 131 14 15910 99 32 12 chr18 17595787 17597279 -68391655 - MER57B-int LTR ERV1 -385 7152 5590 2256 118 0 0 chr18 17597279 17597576 -68391358 + AluSx SINE Alu 1 297 -15 15910 99 32 12 chr18 17597576 17598540 -68390394 - MER57B-int LTR ERV1 -1947 5590 4647 7572 148 59 19 chr18 17598541 17600044 -68388890 - MER57B-int LTR ERV1 -3194 4343 2781 878 134 13 32 chr18 17600040 17600197 -68388737 - MER57B-int LTR ERV1 -4908 2629 2476 * 5117 145 11 3 chr18 17600202 17601069 -68387865 - MER57B-int LTR ERV1 -4382 2331 709 452 91 0 15 chr18 17601058 17601124 -68387810 - MER57B-int LTR ERV1 -6127 1410 1346 * 1206 97 0 6 chr18 17601118 17601293 -68387641 - MER57B-int LTR ERV1 -6570 967 794 * 4170 130 25 12 chr18 17601287 17601958 -68386976 - MER57B-int LTR ERV1 -6857 680 1 2431 118 52 10 chr18 17601962 17602368 -68386566 - MER57B LTR ERV1 -9 425 3 1285 211 32 40 chr18 17602369 17602788 -68386146 - LTR26E LTR ERV1 -116 505 11 1146 211 81 27 chr18 17602806 17603104 -68385830 + MER21B LTR ERV1 528 841 -22 744 114 38 38 chr18 17603945 17604053 -68384881 + FLAM_C SINE Alu 1 111 -201 2392 104 63 65 chr18 17604053 17604513 -68384421 - LTR46 LTR ERV1 0 460 2 744 114 38 38 chr18 17604513 17604535 -68384399 + FLAM_C SINE Alu 110 131 -181 2316 100 3 0 chr18 17604751 17605062 -68383872 - AluSx SINE Alu 0 312 1 2180 139 80 23 chr18 17605063 17605683 -68383251 - L1M1 LINE L1 -743 5403 4837 1736 167 39 0 chr18 17606234 17606515 -68382419 - AluJb SINE Alu -19 293 2 1497 205 148 7 chr18 17606843 17607247 -68381687 - MER119 DNA MER1_type -7 576 116 2201 97 0 3 chr18 17607551 17607849 -68381085 + AluSq SINE Alu 1 297 -16 616 198 0 0 chr18 17608632 17608738 -68380196 - AluJb SINE Alu -20 292 187 2176 98 0 54 chr18 17609172 17609489 -68379445 - AluSg SINE Alu -10 300 1 2182 94 14 3 chr18 17609819 17610107 -68378827 - AluSx SINE Alu -21 291 1 253 232 24 73 chr18 17610107 17610189 -68378745 - MIR SINE MIR -49 213 136 2072 125 45 31 chr18 17610349 17610708 -68378226 + THE1B LTR MaLR 1 364 0 2121 132 3 3 chr18 17613689 17613984 -68374950 + AluSx SINE Alu 1 295 -17 322 251 231 39 chr18 17614024 17614379 -68374555 + L1MC4 LINE L1 6790 7212 -749 318 280 89 45 chr18 17614405 17614562 -68374372 + L1MC4 LINE L1 7310 7473 -569 1880 174 157 14 chr18 17614564 17615257 -68373677 - Charlie1a DNA MER1_type -1 1454 579 714 131 175 0 chr18 17615258 17615395 -68373539 - MER1B DNA MER1_type -1 338 178 525 169 0 0 chr18 17615382 17615471 -68373463 - MER1B DNA MER1_type -242 95 7 * 1753 208 80 29 chr18 17615472 17615928 -68373006 - Charlie1a DNA MER1_type -2175 586 102 2013 141 0 13 chr18 17615928 17616233 -68372701 + AluSx SINE Alu 1 301 -11 1753 208 80 29 chr18 17616233 17616261 -68372673 - Charlie1a DNA MER1_type -2659 102 77 1876 141 21 7 chr18 17616816 17617100 -68371834 - AluJb SINE Alu -24 288 1 1966 143 14 10 chr18 17618489 17618782 -68370152 + AluJo SINE Alu 5 298 -14 2434 35 3 0 chr18 17619472 17619803 -68369131 + AluY SINE Alu 1 332 0 23 101 0 0 chr18 17620329 17620408 -68368526 + AT_rich Low_complexity Low_complexity 1 79 0 1435 187 29 6 chr18 17621116 17621432 -68367502 - L1 LINE L1 -1068 5078 4756 469 374 75 3 chr18 17621434 17621816 -68367118 + L2 LINE L2 2702 3123 -190 1023 152 6 6 chr18 17621825 17621990 -68366944 - FRAM SINE Alu 0 166 2 1348 70 0 12 chr18 17622019 17622190 -68366744 + AluY SINE Alu 99 267 -44 349 288 248 56 chr18 17622308 17622864 -68366070 - L2 LINE L2 -710 2604 1942 254 234 0 117 chr18 17623396 17623473 -68365461 + L2 LINE L2 3246 3313 0 1157 163 28 28 chr18 17623520 17623735 -68365199 - MER20 DNA MER1_type -1 218 4 231 245 66 112 chr18 17624077 17624159 -68364775 - MIR SINE MIR -47 215 131 1680 183 16 13 chr18 17624159 17624470 -68364464 - AluJo SINE Alu 0 312 1 231 245 66 112 chr18 17624470 17624617 -68364317 - MIR SINE MIR -131 131 7 2161 110 3 3 chr18 17625750 17626041 -68362893 + AluSx SINE Alu 3 293 -19 1258 173 3 116 chr18 17626689 17627007 -68361927 - AluJb SINE Alu -30 282 1 1681 188 7 10 chr18 17627466 17627759 -68361175 + AluJb SINE Alu 1 292 -20 7142 49 8 7 chr18 17627772 17629082 -68359852 + L1PA5 LINE L1 4850 6154 0 1854 132 14 10 chr18 17629082 17629370 -68359564 + L1PA16 LINE L1 5775 6063 -103 525 164 133 8 chr18 17629365 17629493 -68359441 + L1MEc LINE L1 194 337 -6059 * 779 146 14 7 chr18 17629603 17629747 -68359187 - L1M4c LINE L1 -5654 730 586 252 163 0 0 chr18 17629744 17629787 -68359147 - L1M4c LINE L1 -6324 60 18 * 261 0 0 0 chr18 17629951 17629980 -68358954 + (T)n Simple_repeat Simple_repeat 1 29 0 285 345 44 20 chr18 17630705 17630908 -68358026 - L2 LINE L2 -181 3091 2884 925 219 130 41 chr18 17631684 17632053 -68356881 + Charlie4a DNA MER1_type 28 429 -79 2299 82 10 0 chr18 17632148 17632441 -68356493 + AluY SINE Alu 1 296 -15 2361 90 0 3 chr18 17632450 17632750 -68356184 + AluY SINE Alu 1 299 -12 315 0 0 0 chr18 17632778 17632813 -68356121 + (CA)n Simple_repeat Simple_repeat 2 36 0 1680 174 21 7 chr18 17633186 17633473 -68355461 + AluJb SINE Alu 1 291 -21 370 179 208 0 chr18 17634340 17634446 -68354488 - MIR SINE MIR -57 205 78 14153 128 51 13 chr18 17635934 17638237 -68350697 - Tigger1 DNA MER2_type 0 2418 28 262 206 10 29 chr18 17638519 17638621 -68350313 + T-rich Low_complexity Low_complexity 5 104 0 854 253 9 31 chr18 17640567 17640628 -68348306 + MER58A DNA MER1_type 1 62 -2358 2427 137 36 63 chr18 17640628 17641073 -68347861 - Tigger2a DNA MER2_type -1 433 1 854 253 9 31 chr18 17641073 17641240 -68347694 + MER58A DNA MER1_type 62 224 0 7263 221 107 19 chr18 17641240 17641658 -68347276 - L1ME1 LINE L1 -214 5952 5572 2138 117 3 22 chr18 17641658 17641974 -68346960 - AluSg SINE Alu 0 310 1 7263 221 107 19 chr18 17641974 17644500 -68344434 - L1ME1 LINE L1 -594 5572 2744 680 89 40 0 chr18 17644495 17644596 -68344338 - L1M LINE L1 -877 5426 5322 * 2239 97 0 3 chr18 17644596 17644885 -68344049 - AluSc SINE Alu -21 288 1 201 74 0 0 chr18 17645021 17645048 -68343886 + (A)n Simple_repeat Simple_repeat 1 27 0 878 113 0 0 chr18 17645048 17645163 -68343771 - AluJb SINE Alu -195 117 3 886 214 31 5 chr18 17645164 17645388 -68343546 - L1ME1 LINE L1 -3602 2544 2315 662 156 0 58 chr18 17645394 17645548 -68343386 - L1MB8 LINE L1 -5 6173 6029 472 227 0 0 chr18 17645549 17645646 -68343288 - AluJb SINE Alu -82 230 134 1770 243 93 60 chr18 17645806 17646168 -68342766 - L1ME3A LINE L1 -52 6118 5769 1489 161 154 0 chr18 17646168 17646466 -68342468 - MER2 DNA MER2_type 0 344 1 1770 243 93 60 chr18 17646466 17646558 -68342376 - L1ME3A LINE L1 -401 5769 5682 2192 132 0 0 chr18 17646558 17646869 -68342065 - AluSx SINE Alu -1 311 1 1770 243 93 60 chr18 17646869 17647076 -68341858 - L1ME3A LINE L1 -488 5682 5434 889 288 105 9 chr18 17647071 17647519 -68341415 - L1ME3A LINE L1 -1755 4391 3901 * 3179 128 34 28 chr18 17647520 17648130 -68340804 + MER4B LTR ERV1 1 779 0 214 302 93 0 chr18 17648553 17648639 -68340295 + L2 LINE L2 3178 3271 -42 9327 60 3 10 chr18 17648757 17650752 -68338182 - L1PA5 LINE L1 -12 6142 4156 1573 96 27 39 chr18 17652562 17652653 -68336281 + L1MA1 LINE L1 6046 6137 -165 2032 107 44 0 chr18 17652653 17652947 -68335987 + AluSx SINE Alu 1 306 0 1573 96 27 39 chr18 17652947 17653114 -68335820 + L1MA1 LINE L1 6137 6302 0 424 263 87 48 chr18 17653692 17654049 -68334885 + LTR16A1 LTR ERVL 86 456 -1 1582 153 38 83 chr18 17654157 17654228 -68334706 - Charlie5 DNA MER1_type -11 2613 2540 754 147 9 0 chr18 17654228 17654344 -68334590 + FLAM_C SINE Alu 1 117 -16 1582 153 38 83 chr18 17654344 17654671 -68334263 - Charlie5 DNA MER1_type -84 2540 2233 490 246 61 0 chr18 17654673 17654787 -68334147 - Charlie5 DNA MER1_type -2491 121 1 1134 160 0 10 chr18 17654894 17655094 -68333840 - MER96B DNA MER1_type? -219 198 1 2190 104 0 7 chr18 17656343 17656687 -68332247 + AluSq SINE Alu 1 313 0 411 225 31 4 chr18 17656822 17656928 -68332006 + MIR SINE MIR 51 154 -62 201 323 98 24 chr18 17656986 17657150 -68331784 - MER5A DNA MER1_type -6 183 8 1684 88 0 9 chr18 17657473 17657699 -68331235 - AluSq SINE Alu -16 297 74 843 210 12 0 chr18 17658046 17658208 -68330726 - FAM SINE Alu -11 164 1 727 176 23 0 chr18 17658516 17658647 -68330287 - AluJo SINE Alu -178 134 1 679 210 78 30 chr18 17658914 17659133 -68329801 + L1MCa LINE L1 10 217 -5828 1289 179 19 31 chr18 17659133 17659408 -68329526 - LTR26E LTR ERV1 0 622 269 326 193 48 0 chr18 17659408 17659491 -68329443 + L1MCa LINE L1 1089 1175 -4870 * 1929 126 3 0 chr18 17659489 17659774 -68329160 - L1PA16 LINE L1 -308 5858 5573 1040 151 16 0 chr18 17659775 17660034 -68328900 + L1PA16 LINE L1 5869 6166 0 * 2571 176 45 40 chr18 17660006 17660413 -68328521 + L1MCa LINE L1 1157 1561 -5003 5829 60 23 3 chr18 17660413 17661160 -68327774 - MER4E LTR ERV1 0 766 5 245 75 25 0 chr18 17661160 17661200 -68327734 + (TA)n Simple_repeat Simple_repeat 1 41 0 2052 117 20 13 chr18 17661206 17661506 -68327428 - AluSx SINE Alu -10 302 1 2571 176 45 40 chr18 17661506 17661715 -68327219 + L1MCa LINE L1 1565 1784 -4780 2009 147 102 108 chr18 17661712 17662241 -68326693 + L1MC2 LINE L1 5683 6208 -136 * 2236 123 0 0 chr18 17662301 17662603 -68326331 + AluSx SINE Alu 1 302 -10 505 178 85 12 chr18 17662621 17662753 -68326181 + L1MC2 LINE L1 6209 7785 0 2076 80 36 28 chr18 17663002 17663520 -68325414 + MER4A LTR ERV1 1 610 0 4944 156 46 5 chr18 17663781 17664646 -68324288 - MER4D LTR ERV1 -2 901 1 330 231 54 31 chr18 17668258 17668388 -68320546 - L1ME4a LINE L1 -11 6110 5978 2254 114 3 0 chr18 17668823 17669122 -68319812 - AluSx SINE Alu -12 300 1 295 256 134 12 chr18 17669130 17669302 -68319632 - L1ME4a LINE L1 -297 5824 5632 1845 162 0 13 chr18 17669412 17669715 -68319219 - AluJo SINE Alu -13 299 1 2238 115 0 0 chr18 17670173 17670468 -68318466 - AluSx SINE Alu -17 295 1 357 264 32 16 chr18 17672479 17672604 -68316330 - MLT1K LTR MaLR -10 578 452 257 276 155 46 chr18 17672776 17672950 -68315984 - MLT1K LTR MaLR -277 311 119 237 65 0 0 chr18 17673522 17673553 -68315381 + (T)n Simple_repeat Simple_repeat 1 31 0 2774 29 3 0 chr18 17673748 17674058 -68314876 - AluY SINE Alu 0 311 1 352 251 172 60 chr18 17675036 17675251 -68313683 + MIR SINE MIR 14 252 -10 283 282 48 10 chr18 17675417 17675520 -68313414 + MIR SINE MIR 106 212 -50 445 139 0 0 chr18 17677695 17677767 -68311167 + AluJ/FRAM SINE Alu 228 299 -13 2456 223 29 23 chr18 17677767 17678499 -68310435 + L1M4 LINE L1 2536 3271 -2875 5615 223 37 16 chr18 17678501 17680019 -68308915 + L1M4 LINE L1 3059 4607 -1539 1545 140 32 4 chr18 17680032 17680311 -68308623 + L1MB7 LINE L1 5898 6184 0 513 88 0 0 chr18 17680430 17680510 -68308424 + (TAGA)n Simple_repeat Simple_repeat 3 82 0 207 167 0 0 chr18 17680535 17680571 -68308363 - MIR SINE MIR -71 191 156 852 201 30 6 chr18 17680575 17680739 -68308195 - MER74A LTR ERVL -390 168 1 300 241 63 0 chr18 17680740 17680819 -68308115 + MLT1L LTR MaLR 531 614 -1 2208 146 6 3 chr18 17680826 17681168 -68307766 + MER2 DNA MER2_type 1 343 -1 2003 130 8 81 chr18 17681323 17681400 -68307534 + L1PA16 LINE L1 5721 5802 -364 4355 37 4 9 chr18 17681400 17681942 -68306992 + L1PA4 LINE L1 5617 6155 0 2003 130 8 81 chr18 17681942 17682234 -68306700 + L1PA16 LINE L1 5802 6063 -103 525 164 133 8 chr18 17682229 17682357 -68306577 + L1MEc LINE L1 194 337 -6059 * 765 137 7 14 chr18 17682467 17682613 -68306321 - L1M4c LINE L1 -5654 730 586 252 163 0 0 chr18 17682610 17682653 -68306281 - L1M4c LINE L1 -6324 60 18 * 398 274 102 6 chr18 17685297 17685454 -68303480 - MIR SINE MIR -2 260 89 1209 227 105 19 chr18 17686035 17686396 -68302538 - L1ME3A LINE L1 -133 6037 5646 1612 118 47 106 chr18 17686397 17686737 -68302197 + MSTB1 LTR MaLR 1 320 -112 3105 258 13 29 chr18 17686964 17687725 -68301209 + L1PA15 LINE L1 2 750 -6037 2074 129 0 4 chr18 17687849 17688129 -68300805 + AluSg SINE Alu 1 279 -31 248 197 0 15 chr18 17688146 17688212 -68300722 + GA-rich Low_complexity Low_complexity 4 68 0 360 361 69 4 chr18 17688224 17688541 -68300393 - L2 LINE L2 -218 3054 2702 2902 156 68 31 chr18 17688547 17689089 -68299845 + L1 LINE L1 4758 5327 -842 1737 129 0 31 chr18 17689089 17689383 -68299551 + AluSc SINE Alu 1 285 -24 2902 156 68 31 chr18 17689383 17689487 -68299447 + L1 LINE L1 5327 5426 -743 213 94 0 0 chr18 17689639 17689671 -68299263 + (A)n Simple_repeat Simple_repeat 1 32 0 16604 214 33 16 chr18 17689711 17692244 -68296690 + L1PA15 LINE L1 1652 4143 -2673 1982 73 27 100 chr18 17692244 17692573 -68296361 + AluYb8 SINE Alu 9 313 -5 16604 214 33 16 chr18 17692573 17694999 -68293935 + L1PA15 LINE L1 4143 6691 -125 338 153 14 56 chr18 17695016 17695088 -68293846 + LTR9 LTR ERV1 458 526 -86 811 110 37 7 chr18 17695101 17695237 -68293697 + L1PA15 LINE L1 6676 6815 -1 855 132 0 0 chr18 17695239 17695360 -68293574 + MSTB1 LTR MaLR 310 430 -2 783 238 130 68 chr18 17695361 17695840 -68293094 - L1ME LINE L1 -536 5634 5186 2155 107 6 31 chr18 17695840 17696159 -68292775 - AluY SINE Alu 0 311 1 783 238 130 68 chr18 17696159 17696582 -68292352 - L1ME LINE L1 -984 5186 4631 2162 204 7 26 chr18 17696816 17697237 -68291697 - MSTB LTR MaLR -6 420 8 6421 211 84 18 chr18 17697242 17697622 -68291312 - MSTB-int LTR MaLR 0 1580 1227 1754 156 58 33 chr18 17697622 17697987 -68290947 - THE1C LTR MaLR 0 375 2 6421 211 84 18 chr18 17697987 17699086 -68289848 - MSTB-int LTR MaLR -353 1227 3 2512 158 16 12 chr18 17699088 17699512 -68289422 - MSTB LTR MaLR 0 426 1 2179 113 10 3 chr18 17699722 17700014 -68288920 - AluSq SINE Alu -18 295 2 1563 210 0 13 chr18 17700266 17700566 -68288368 - AluJo SINE Alu -16 296 1 2431 68 0 39 chr18 17700671 17700999 -68287935 - AluY SINE Alu 0 316 1 1458 191 0 4 chr18 17701481 17701711 -68287223 - MER8 DNA MER2_type -10 229 1 43 20 0 0 chr18 17701948 17701998 -68286936 + AT_rich Low_complexity Low_complexity 1 50 0 2021 126 3 57 chr18 17702104 17702422 -68286512 + AluSg SINE Alu 1 301 -9 3958 46 0 12 chr18 17702423 17702903 -68286031 + L1PA8A LINE L1 5658 6131 0 6513 162 16 8 chr18 17702904 17704979 -68283955 + L1MA4 LINE L1 4181 6280 -20 333 0 0 0 chr18 17705035 17705072 -68283862 + (TG)n Simple_repeat Simple_repeat 2 38 0 841 115 15 0 chr18 17705977 17706107 -68282827 + FLAM_C SINE Alu 2 133 0 190 300 189 0 chr18 17708209 17708299 -68280635 + MIR SINE MIR 31 137 -71 611 165 0 0 chr18 17708413 17708516 -68280418 + AluSg/x SINE Alu 207 309 0 863 194 161 0 chr18 17710365 17710494 -68278440 + MER3 DNA MER1_type 1 108 -101 2408 82 0 13 chr18 17710494 17710797 -68278137 - AluY SINE Alu -12 299 1 209 56 0 28 chr18 17710804 17710840 -68278094 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 863 194 161 0 chr18 17710840 17710882 -68278052 + MER3 DNA MER1_type 113 209 0 511 229 124 52 chr18 17710882 17711037 -68277897 - MLT1J LTR MaLR -6 505 324 589 169 97 48 chr18 17711037 17711161 -68277773 - FLAM_A SINE Alu -3 130 1 511 229 124 52 chr18 17711161 17711254 -68277680 - MLT1J LTR MaLR -187 324 239 723 290 26 41 chr18 17711281 17711774 -68277160 - HAL1 LINE L1 -1185 1322 837 323 249 44 94 chr18 17712229 17712410 -68276524 - HAL1 LINE L1 -2299 208 37 1388 188 100 4 chr18 17712962 17713233 -68275701 + AluJb SINE Alu 3 299 -13 182 298 8 99 chr18 17713268 17713324 -68275610 - MIR SINE MIR -54 208 169 2264 105 6 10 chr18 17713324 17713638 -68275296 + AluSq SINE Alu 1 313 0 182 298 8 99 chr18 17713638 17713712 -68275222 - MIR SINE MIR -93 169 90 285 167 0 0 chr18 17713890 17713944 -68274990 + (TG)n Simple_repeat Simple_repeat 2 55 0 1017 292 22 18 chr18 17714731 17715089 -68273845 + L1MC/D LINE L1 5395 5751 -766 2861 125 109 27 chr18 17715522 17716009 -68272925 - MER1A DNA MER1_type 0 527 1 4351 18 0 6 chr18 17716429 17716929 -68272005 + L1HS LINE L1 5659 6155 0 2513 43 0 20 chr18 17717532 17717833 -68271101 - AluY SINE Alu -16 295 1 2420 99 0 0 chr18 17718509 17718812 -68270122 - AluSx SINE Alu -9 303 1 754 152 18 0 chr18 17721115 17721227 -68267707 + AluJo SINE Alu 79 192 -120 1775 172 17 0 chr18 17721364 17721660 -68267274 - AluJb SINE Alu -11 301 1 425 246 48 0 chr18 17721680 17721806 -68267128 - L1M4 LINE L1 -2196 3950 3819 30 59 0 0 chr18 17721897 17721948 -68266986 + AT_rich Low_complexity Low_complexity 1 51 0 2351 90 0 22 chr18 17722567 17722879 -68266055 + AluY SINE Alu 1 305 -6 337 219 91 109 chr18 17723380 17723486 -68265448 + MIR SINE MIR 50 152 -110 2394 82 3 0 chr18 17723486 17723780 -68265154 - AluY SINE Alu -16 295 1 337 219 91 109 chr18 17723780 17723883 -68265051 + MIR SINE MIR 152 255 -7 1982 168 6 12 chr18 17723903 17724248 -68264686 - MLT1A1 LTR MaLR -4 361 19 183 277 0 108 chr18 17724350 17724433 -68264501 + MIR SINE MIR 177 250 -12 2313 279 63 33 chr18 17724606 17725233 -68263701 + L1ME LINE L1 492 1098 -5442 1822 123 4 12 chr18 17725233 17725485 -68263449 + AluSx SINE Alu 47 296 -16 2313 279 63 33 chr18 17725485 17726153 -68262781 + L1ME LINE L1 1098 1820 -4720 743 302 60 16 chr18 17726176 17726494 -68262440 + L1ME LINE L1 511 842 -5698 1274 288 41 40 chr18 17726507 17726806 -68262128 + L1ME LINE L1 1872 2169 -4371 2329 95 0 0 chr18 17726806 17727089 -68261845 + AluY SINE Alu 1 301 -10 316 0 0 0 chr18 17727089 17727124 -68261810 + (TAAA)n Simple_repeat Simple_repeat 2 112 0 2329 95 0 0 chr18 17727124 17727136 -68261798 + AluY SINE Alu 300 311 0 1274 288 41 40 chr18 17727136 17727670 -68261264 + L1ME LINE L1 2169 2677 -3863 1722 148 3 23 chr18 17727670 17727974 -68260960 + AluSc SINE Alu 5 302 -7 1274 288 41 40 chr18 17727974 17728081 -68260853 + L1ME LINE L1 2677 2782 -3758 2294 101 0 10 chr18 17728170 17728478 -68260456 - AluSx SINE Alu 0 312 8 1447 282 60 24 chr18 17728482 17729420 -68259514 + L1MDa LINE L1 48 1102 -5438 2109 138 0 0 chr18 17730036 17730340 -68258594 + AluSx SINE Alu 1 304 -8 207 0 0 0 chr18 17730459 17730482 -68258452 + (TG)n Simple_repeat Simple_repeat 1 23 0 2721 137 70 9 chr18 17731080 17731540 -68257394 + L1PA16 LINE L1 5657 6144 -22 665 198 181 22 chr18 17731612 17731839 -68257095 + L1MD2 LINE L1 15 277 -6146 1510 154 89 4 chr18 17731867 17732147 -68256787 + AluJb SINE Alu 1 302 0 931 128 13 1 chr18 17732150 17732303 -68256631 + L1MA10 LINE L1 6006 6301 -2 408 256 218 0 chr18 17732307 17732463 -68256471 + L1MD2 LINE L1 266 455 -5968 1855 290 76 50 chr18 17732587 17734281 -68254653 + L1MD2 LINE L1 649 2602 -4520 * 2445 244 121 35 chr18 17734269 17735187 -68253747 + L1MD2 LINE L1 6106 7102 -52 192 97 0 0 chr18 17735187 17735218 -68253716 + (T)n Simple_repeat Simple_repeat 1 31 0 960 177 0 28 chr18 17736130 17736311 -68252623 - FRAM SINE Alu 0 40 1 367 310 106 32 chr18 17736578 17737039 -68251895 - L2 LINE L2 -667 2647 2153 353 250 57 0 chr18 17737049 17737137 -68251797 - MLT1G LTR MaLR -433 157 65 2310 54 18 7 chr18 17737506 17737784 -68251150 - AluY SINE Alu -14 297 17 202 222 19 19 chr18 17738752 17738806 -68250128 + (TG)n Simple_repeat Simple_repeat 1 54 0 7185 61 7 1 chr18 17739234 17740676 -68248258 - L1PA7 LINE L1 0 6154 4713 26 30 0 0 chr18 17740701 17740734 -68248200 + AT_rich Low_complexity Low_complexity 1 33 0 274 151 19 0 chr18 17740888 17740941 -68247993 + L1M4 LINE L1 2500 2553 -3593 1242 197 53 43 chr18 17740953 17741253 -68247681 - MLT1B LTR MaLR -9 381 79 186 43 0 0 chr18 17741361 17741384 -68247550 + (A)n Simple_repeat Simple_repeat 1 23 0 32022 107 18 54 chr18 17743327 17749711 -68239223 + L1PA7 LINE L1 12 6154 0 231 191 59 29 chr18 17750363 17750431 -68238503 - L1MEc LINE L1 -3571 2644 2575 4273 119 73 8 chr18 17750454 17751166 -68237768 - L1MA4 LINE L1 -9 6291 5534 723 193 7 0 chr18 17751166 17751316 -68237618 - L1MEc LINE L1 -3613 2602 2452 711 230 116 26 chr18 17751318 17751822 -68237112 - L1MEc LINE L1 -3709 2523 1987 24 0 0 0 chr18 17751920 17751944 -68236990 + AT_rich Low_complexity Low_complexity 1 24 0 1797 117 13 49 chr18 17752030 17752338 -68236596 + AluY SINE Alu 1 297 -14 353 250 57 0 chr18 17752707 17752795 -68236139 + MLT1G LTR MaLR 65 157 -433 367 310 106 32 chr18 17752805 17753266 -68235668 + L2 LINE L2 2153 2647 -667 996 193 0 0 chr18 17753533 17753709 -68235225 + FRAM SINE Alu 1 40 0 180 0 0 0 chr18 17756947 17756967 -68231967 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 206 152 0 22 chr18 17758131 17758177 -68230757 + GA-rich Low_complexity Low_complexity 2 46 0 273 235 68 30 chr18 17758971 17759103 -68229831 - L1ME4a LINE L1 -11 6110 5974 478 284 50 25 chr18 17759106 17759497 -68229437 - MLT1J2 LTR MaLR -2 448 6 987 231 154 19 chr18 17759813 17760138 -68228796 - MER93b LTR ERV1 0 373 5 838 167 0 0 chr18 17760339 17760465 -68228469 + FLAM_C SINE Alu 1 126 -17 754 252 56 0 chr18 17760486 17760700 -68228234 + MIR SINE MIR 20 245 -17 722 254 77 27 chr18 17760855 17761115 -68227819 + L1MC4a LINE L1 5763 6035 -1773 21 0 0 0 chr18 17761193 17761214 -68227720 + AT_rich Low_complexity Low_complexity 1 21 0 273 273 0 0 chr18 17761516 17761593 -68227341 - MIR SINE MIR -75 187 111 2014 182 35 16 chr18 17762821 17763256 -68225678 - L1MB7 LINE L1 0 6995 6553 1695 204 73 54 chr18 17763256 17763777 -68225157 + MER51C LTR ERV1 1 640 0 1723 218 77 0 chr18 17763777 17764195 -68224739 - L1MB7 LINE L1 -439 6556 6107 2433 219 88 108 chr18 17764232 17764641 -68224293 - L1MB7 LINE L1 -5189 1670 1254 1837 161 7 20 chr18 17764641 17764939 -68223995 - AluJo SINE Alu -12 300 7 2433 219 88 108 chr18 17764939 17765679 -68223255 - L1MB7 LINE L1 -5605 1254 544 827 206 105 5 chr18 17765842 17766132 -68222802 - MLT1E1 LTR MaLR -2 652 289 1996 206 168 42 chr18 17766380 17767196 -68221738 + LTR28 LTR ERV1 1 822 -4 247 319 50 34 chr18 17767311 17767430 -68221504 - MLT1E LTR MaLR -292 301 181 954 181 0 19 chr18 17767476 17767636 -68221298 - AluJo SINE Alu -155 157 1 546 191 259 7 chr18 17767636 17767783 -68221151 - MLT1E LTR MaLR -409 184 1 451 206 110 39 chr18 17767784 17767939 -68220995 + MIR SINE MIR 97 262 0 468 0 0 0 chr18 17769710 17769762 -68219172 + (CA)n Simple_repeat Simple_repeat 2 53 0 360 59 0 0 chr18 17769762 17769813 -68219121 + (TC)n Simple_repeat Simple_repeat 2 52 0 532 113 0 12 chr18 17770431 17770511 -68218423 - MADE1 DNA Mariner -1 79 1 2895 139 29 4 chr18 17771878 17772359 -68216575 + L1PB4 LINE L1 5658 6150 -6 284 333 36 18 chr18 17773127 17773238 -68215696 - MER81 DNA DNA 0 114 2 1015 255 101 25 chr18 17773625 17774108 -68214826 + MLT2B1 LTR ERVL 1 520 0 414 235 0 12 chr18 17775230 17775315 -68213619 - AluJ/FLAM SINE Alu -227 85 2 27 29 0 0 chr18 17775822 17775856 -68213078 + AT_rich Low_complexity Low_complexity 1 34 0 252 265 51 31 chr18 17776019 17776117 -68212817 - MIR SINE MIR -131 131 32 455 252 63 0 chr18 17777050 17777193 -68211741 - LTR16B LTR ERVL -112 352 201 1002 306 48 8 chr18 17777393 17777749 -68211185 - L1MC4a LINE L1 -1979 5829 5460 321 235 37 0 chr18 17778779 17778860 -68210074 - MLT2B2 LTR ERVL -431 84 1 446 0 19 0 chr18 17778939 17778993 -68209941 + (CA)n Simple_repeat Simple_repeat 2 56 0 764 165 8 8 chr18 17778993 17779120 -68209814 - AluJb SINE Alu -45 267 141 336 83 0 0 chr18 17780262 17780310 -68208624 + (TG)n Simple_repeat Simple_repeat 1 48 0 182 304 17 52 chr18 17780594 17780709 -68208225 + MIR SINE MIR 138 248 -14 25 31 0 0 chr18 17782698 17782730 -68206204 + AT_rich Low_complexity Low_complexity 1 32 0 316 348 6 0 chr18 17782890 17783051 -68205883 + L1ME4a LINE L1 5657 5818 -303 22383 181 99 10 chr18 17783077 17789962 -68198972 + L1MA1 LINE L1 11 7557 -164 2190 98 0 26 chr18 17790227 17790534 -68198400 + AluY SINE Alu 1 299 -12 7487 162 22 8 chr18 17790536 17790704 -68198230 + L1MA4 LINE L1 3993 4157 -2143 7053 42 6 29 chr18 17790704 17791421 -68197513 + L1PA8A LINE L1 4697 5429 -702 1663 95 0 0 chr18 17791421 17791631 -68197303 + AluSc SINE Alu 82 291 -18 7053 42 6 29 chr18 17791631 17791910 -68197024 + L1PA8A LINE L1 5429 5713 -418 2177 110 0 57 chr18 17791910 17792228 -68196706 + AluSc SINE Alu 1 300 -9 7053 42 6 29 chr18 17792228 17792709 -68196225 + L1PA8A LINE L1 5713 6131 0 7487 162 22 8 chr18 17792709 17794785 -68194149 + L1MA4 LINE L1 4157 6280 -20 333 0 0 0 chr18 17794841 17794878 -68194056 + (TG)n Simple_repeat Simple_repeat 2 38 0 242 222 19 0 chr18 17794908 17794962 -68193972 + L1ME4a LINE L1 5986 6040 -81 * 5833 176 20 14 chr18 17794957 17796054 -68192880 - L1MC3 LINE L1 -1 7784 6681 1866 234 25 42 chr18 17796052 17796664 -68192270 - L1M4 LINE L1 -985 5161 4561 * 335 212 0 0 chr18 17798428 17798494 -68190440 - MIR SINE MIR -118 144 79 257 205 0 26 chr18 17800733 17800811 -68188123 + (TATG)n Simple_repeat Simple_repeat 3 78 0 261 248 0 64 chr18 17803667 17803776 -68185158 + GA-rich Low_complexity Low_complexity 4 105 0 247 246 68 51 chr18 17803904 17804022 -68184912 - MIR SINE MIR -24 238 119 246 289 10 10 chr18 17804167 17804264 -68184670 - L2 LINE L2 -1445 1869 1773 1391 186 46 49 chr18 17804277 17804434 -68184500 - L1MA9 LINE L1 -30 6282 6126 1997 132 3 10 chr18 17804434 17804763 -68184171 - AluSx SINE Alu 0 312 1 1391 186 46 49 chr18 17804763 17804975 -68183959 - L1MA9 LINE L1 -186 6126 5914 1772 183 3 0 chr18 17806114 17806409 -68182525 - AluJb SINE Alu -16 296 1 322 328 55 0 chr18 17806525 17806653 -68182281 - L2 LINE L2 -2 3270 3136 373 235 110 59 chr18 17806945 17807081 -68181853 + MIR SINE MIR 12 154 -108 619 234 104 94 chr18 17807090 17807146 -68181788 + MLT1I LTR MaLR 1 55 -354 2455 74 0 0 chr18 17807146 17807445 -68181489 - AluY SINE Alu -10 301 3 619 234 104 94 chr18 17807445 17807799 -68181135 + MLT1I LTR MaLR 55 409 0 312 161 36 0 chr18 17807816 17807872 -68181062 + MIR SINE MIR 184 241 -21 200 250 54 65 chr18 17808416 17808508 -68180426 - MIR3 SINE MIR -23 185 95 355 265 59 10 chr18 17808742 17808844 -68180090 - LTR33 LTR ERVL -5 516 410 490 235 85 0 chr18 17808957 17809110 -68179824 - LTR33 LTR ERVL -354 167 2 1346 195 227 5 chr18 17809110 17809516 -68179418 + LTR54B LTR ERV1 1 496 -2 262 333 9 9 chr18 17810182 17810296 -68178638 - MIR3 SINE MIR -9 199 86 195 240 0 0 chr18 17810983 17811033 -68177901 + MER5A DNA MER1_type 1 50 -139 962 221 90 27 chr18 17811249 17811548 -68177386 + Charlie2 DNA MER1_type 2545 2862 0 2148 130 0 3 chr18 17813291 17813591 -68175343 + AluSc SINE Alu 1 299 -10 2190 103 10 13 chr18 17813777 17814087 -68174847 + AluSg1 SINE Alu 1 309 0 1455 124 26 45 chr18 17814121 17814424 -68174510 + L1PA11 LINE L1 5911 6174 0 705 125 10 0 chr18 17814928 17815032 -68173902 + THE1C LTR MaLR 271 375 0 958 266 102 30 chr18 17816001 17816455 -68172479 + MLT1G1 LTR MaLR 55 587 -6 233 296 0 70 chr18 17819174 17819234 -68169700 + MER5B DNA MER1_type 1 51 -127 2386 92 10 0 chr18 17819234 17819529 -68169405 + AluSg SINE Alu 1 298 -12 233 296 0 70 chr18 17819529 17819583 -68169351 + MER5B DNA MER1_type 51 107 -71 1145 277 75 39 chr18 17820642 17821179 -68167755 + MLT1F1 LTR MaLR 3 567 0 225 340 0 21 chr18 17821297 17821394 -68167540 + MIR SINE MIR 71 165 -97 295 156 0 0 chr18 17821575 17821620 -68167314 - MER116 DNA Mariner 0 80 36 277 341 24 59 chr18 17821751 17821921 -68167013 + L2 LINE L2 2986 3149 -123 408 141 0 0 chr18 17822063 17822134 -68166800 - Alu SINE Alu -3 309 239 384 307 127 18 chr18 17823852 17824184 -68164750 - HAL1 LINE L1 -110 2397 2030 949 290 175 21 chr18 17824277 17824887 -68164047 - HAL1 LINE L1 -620 1887 1184 232 148 115 0 chr18 17824928 17824989 -68163945 - MSTB1 LTR MaLR -85 347 280 203 0 37 0 chr18 17825635 17825662 -68163272 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2312 97 0 0 chr18 17825737 17826026 -68162908 - AluY SINE Alu -22 289 1 1982 121 14 0 chr18 17826155 17826469 -68162465 - AluSx SINE Alu 0 318 1 2571 62 0 3 chr18 17827066 17827375 -68161559 - AluY SINE Alu -3 308 1 1678 107 63 80 chr18 17828249 17828549 -68160385 - AluSq SINE Alu -18 295 1 873 251 9 0 chr18 17829255 17829474 -68159460 + L1M4 LINE L1 2346 2566 -3580 2097 143 28 15 chr18 17829474 17829867 -68159067 + L1MB3 LINE L1 5779 6176 -7 22 0 0 0 chr18 17829917 17829939 -68158995 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr18 17830081 17830105 -68158829 + AT_rich Low_complexity Low_complexity 1 24 0 728 280 16 12 chr18 17830186 17830443 -68158491 + L1MC/D LINE L1 5347 5604 -2204 246 286 14 0 chr18 17830774 17830844 -68158090 + L3 LINE CR1 881 951 -626 509 302 48 0 chr18 17830951 17831140 -68157794 + L1MC/D LINE L1 5598 5795 -2013 1805 204 16 22 chr18 17831324 17831404 -68157530 + MLT1A1 LTR MaLR 1 80 -285 2333 77 0 32 chr18 17831404 17831717 -68157217 + AluY SINE Alu 1 303 -8 1805 204 16 22 chr18 17831717 17832003 -68156931 + MLT1A1 LTR MaLR 80 365 0 253 154 13 39 chr18 17832103 17832181 -68156753 + (TTA)n Simple_repeat Simple_repeat 2 77 0 260 318 31 70 chr18 17832256 17832385 -68156549 - MIR SINE MIR -68 140 17 221 290 32 32 chr18 17832544 17832637 -68156297 + L2 LINE L2 2766 2858 -456 923 61 24 24 chr18 17832647 17832811 -68156123 + (TTTC)n Simple_repeat Simple_repeat 4 167 0 234 91 0 0 chr18 17832811 17832844 -68156090 + (TCCC)n Simple_repeat Simple_repeat 3 35 0 442 302 66 40 chr18 17832851 17832886 -68156048 + L2 LINE L2 2828 2861 -452 2022 132 17 3 chr18 17832886 17833175 -68155759 - AluSc SINE Alu -16 293 1 442 302 66 40 chr18 17833175 17833440 -68155494 + L2 LINE L2 2861 3136 -177 2264 117 0 0 chr18 17834034 17834333 -68154601 - AluSx SINE Alu -13 299 1 21 57 0 0 chr18 17834339 17834374 -68154560 + AT_rich Low_complexity Low_complexity 1 35 0 4607 241 102 32 chr18 17834767 17836580 -68152354 - L1ME1 LINE L1 -115 6120 4436 249 108 0 0 chr18 17836580 17836617 -68152317 + (TATG)n Simple_repeat Simple_repeat 4 40 0 4607 241 102 32 chr18 17836617 17836924 -68152010 - L1ME1 LINE L1 -1799 4436 4152 1995 100 43 4 chr18 17836924 17837205 -68151729 - AluSg SINE Alu -18 292 1 4607 241 102 32 chr18 17837205 17837909 -68151025 - L1ME1 LINE L1 -2083 4152 3094 2016 177 47 0 chr18 17837910 17838294 -68150640 + Tigger1 DNA MER2_type 1 402 -2016 946 283 11 30 chr18 17838301 17838764 -68150170 - L1ME1 LINE L1 -4680 1716 1263 749 281 22 0 chr18 17838796 17839020 -68149914 - LTR40c LTR ERVL -230 235 7 3397 281 60 30 chr18 17839072 17840340 -68148594 - HERVL40 LTR ERVL -492 5038 3733 213 154 0 0 chr18 17840445 17840484 -68148450 + CT-rich Low_complexity Low_complexity 2 40 0 770 205 12 12 chr18 17841028 17841194 -68147740 + L1PA13 LINE L1 1292 1457 -5330 11958 209 35 23 chr18 17841199 17843057 -68145877 + L1PA13 LINE L1 2434 4347 -2450 399 21 0 0 chr18 17843057 17843105 -68145829 + (CAAAA)n Simple_repeat Simple_repeat 5 52 0 11958 209 35 23 chr18 17843105 17844355 -68144579 + L1PA13 LINE L1 4347 5580 -1217 1140 294 66 33 chr18 17844380 17845334 -68143600 + L1MB8 LINE L1 1017 1978 -4668 317 232 22 101 chr18 17845412 17845550 -68143384 + L1MB8 LINE L1 1795 1921 -4723 611 196 81 51 chr18 17845559 17845775 -68143159 - LTR41 LTR ERVL 0 795 553 311 171 0 13 chr18 17845889 17845965 -68142969 + L1MB8 LINE L1 1839 1913 -4733 935 195 5 0 chr18 17845965 17846155 -68142779 - L1MB5 LINE L1 -348 5826 5636 1349 198 258 12 chr18 17846155 17846651 -68142283 - L1MCa LINE L1 -4764 1662 1035 2063 67 19 7 chr18 17846651 17846944 -68141990 - AluY SINE Alu 0 311 17 1349 198 258 12 chr18 17846944 17846958 -68141976 - L1MCa LINE L1 -5391 1035 1026 202 222 19 19 chr18 17847912 17847966 -68140968 + (TG)n Simple_repeat Simple_repeat 1 54 0 7025 61 7 1 chr18 17848394 17849836 -68139098 - L1PA7 LINE L1 0 6154 4713 26 30 0 0 chr18 17849861 17849894 -68139040 + AT_rich Low_complexity Low_complexity 1 33 0 253 151 19 0 chr18 17850048 17850101 -68138833 + L1MB8 LINE L1 2998 3051 -3593 1467 197 71 33 chr18 17850115 17850480 -68138454 - MLT1B LTR MaLR -11 379 1 346 227 118 0 chr18 17850486 17850596 -68138338 + L1MB8 LINE L1 3056 3178 -3466 610 264 57 3 chr18 17850597 17850896 -68138038 + L1MB8 LINE L1 3492 3806 -2838 5487 153 23 32 chr18 17850902 17851377 -68137557 + L1MA9 LINE L1 5164 5642 -670 2224 130 13 24 chr18 17851377 17851754 -68137180 - THE1C LTR MaLR -2 373 1 5487 153 23 32 chr18 17851754 17852433 -68136501 + L1MA9 LINE L1 5642 6312 0 5902 194 40 26 chr18 17852437 17853083 -68135851 + L1MB8 LINE L1 4237 4872 -1804 2185 125 0 3 chr18 17853083 17853394 -68135540 + AluSg SINE Alu 1 310 0 5902 194 40 26 chr18 17853394 17853405 -68135529 + L1MB8 LINE L1 4872 4881 -1795 1966 96 13 32 chr18 17853405 17853719 -68135215 + AluY SINE Alu 1 308 -3 5902 194 40 26 chr18 17853719 17854924 -68134010 + L1MB8 LINE L1 4881 6117 -559 1856 159 12 6 chr18 17854926 17855260 -68133674 - MLT1A1 LTR MaLR -3 362 27 1942 172 78 23 chr18 17855309 17855786 -68133148 + L1MB8 LINE L1 6146 6648 -28 2497 65 0 0 chr18 17856564 17856873 -68132061 + AluY SINE Alu 1 309 -2 223 283 61 20 chr18 17858602 17858701 -68130233 + L3 LINE CR1 1177 1279 -298 219 308 83 41 chr18 17858852 17859021 -68129913 + MIR SINE MIR 14 189 -73 524 211 165 61 chr18 17859098 17859444 -68129490 + MLT1D LTR MaLR 1 382 -123 725 228 104 0 chr18 17860214 17860425 -68128509 - MLT1F1 LTR MaLR 0 567 335 233 146 21 0 chr18 17860499 17860547 -68128387 + GA-rich Low_complexity Low_complexity 1 49 0 1725 173 57 22 chr18 17860951 17861322 -68127612 + MLT1B LTR MaLR 7 390 0 204 40 0 0 chr18 17861797 17861822 -68127112 + (TCC)n Simple_repeat Simple_repeat 3 27 0 210 128 0 0 chr18 17861949 17861988 -68126946 + (T)n Simple_repeat Simple_repeat 1 39 0 41054 31 21 2 chr18 17861992 17868025 -68120909 - L1HS LINE L1 -2 6153 1 189 107 0 0 chr18 17868025 17868053 -68120881 + (T)n Simple_repeat Simple_repeat 1 28 0 190 263 163 12 chr18 17868881 17868961 -68119973 - L2 LINE L2 0 3313 3222 248 218 18 0 chr18 17869613 17869668 -68119266 - MER94 DNA DNA -78 56 1 320 294 91 50 chr18 17870681 17870902 -68118032 + L2 LINE L2 2082 2311 -1003 797 244 45 45 chr18 17870928 17871071 -68117863 - MIR SINE MIR -40 222 77 5935 105 4 34 chr18 17871071 17873109 -68115825 + L1PA15 LINE L1 4150 6160 -5 797 244 45 45 chr18 17873109 17873186 -68115748 - MIR SINE MIR -184 78 2 548 352 107 10 chr18 17873327 17873617 -68115317 + MER115 DNA AcHobo 98 415 -278 974 202 270 8 chr18 17873629 17874177 -68114757 + LTR50 LTR ERVL 11 793 -2 21 36 0 0 chr18 17875083 17875111 -68113823 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr18 17875132 17875168 -68113766 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr18 17875376 17875401 -68113533 + AT_rich Low_complexity Low_complexity 1 25 0 354 202 75 0 chr18 17875583 17875677 -68113257 - L1 LINE L1 -2491 3655 3555 4647 150 56 42 chr18 17875677 17876671 -68112263 + L1MA8 LINE L1 4327 5306 -985 2922 110 24 2 chr18 17876671 17877090 -68111844 + MSTA LTR MaLR 1 428 0 4647 150 56 42 chr18 17877090 17878030 -68110904 + L1MA8 LINE L1 5306 6290 -1 27 49 0 0 chr18 17878054 17878095 -68110839 + AT_rich Low_complexity Low_complexity 1 41 0 536 335 24 14 chr18 17878440 17878649 -68110285 + MIR SINE MIR 38 248 -14 1508 159 115 16 chr18 17879247 17879561 -68109373 - MER2 DNA MER2_type 0 345 1 226 281 0 31 chr18 17880094 17880158 -68108776 + L1M3c LINE L1 1 62 -6079 310 203 40 0 chr18 17880319 17880393 -68108541 + L1M4 LINE L1 48 124 -6418 2159 105 0 11 chr18 17883037 17883356 -68105578 - AluSx SINE Alu 0 316 1 23 0 0 0 chr18 17883370 17883393 -68105541 + AT_rich Low_complexity Low_complexity 1 23 0 1003 320 61 11 chr18 17883554 17884075 -68104859 - L2 LINE L2 -32 3281 2741 598 328 30 4 chr18 17884071 17884306 -68104628 + L2 LINE L2 3041 3281 -32 * 1950 64 29 6 chr18 17884366 17884632 -68104302 + THE1A LTR MaLR 105 355 0 259 264 112 24 chr18 17886780 17886905 -68102029 + MLT1K LTR MaLR 156 291 -297 833 226 8 75 chr18 17887426 17887691 -68101243 - L1MC4 LINE L1 -1071 6971 6725 48 60 0 0 chr18 17888408 17888491 -68100443 + AT_rich Low_complexity Low_complexity 1 83 0 451 113 0 0 chr18 17888527 17888589 -68100345 - Alu SINE Alu -13 296 235 35841 57 4 3 chr18 17888589 17893080 -68095854 - L1P LINE L1 -1639 4507 11 812 171 8 0 chr18 17893121 17893244 -68095690 + FLAM_C SINE Alu 2 125 -18 333 334 87 42 chr18 17893903 17894238 -68094696 - L1ME3A LINE L1 -27 6143 5794 6131 112 13 30 chr18 17894262 17895098 -68093836 - L1PA16 LINE L1 -11 6155 5341 1576 172 28 21 chr18 17895098 17895388 -68093546 - AluJo SINE Alu -20 292 1 6131 112 13 30 chr18 17895388 17896089 -68092845 - L1PA16 LINE L1 -825 5341 4629 6560 77 13 41 chr18 17896090 17897071 -68091863 - SVA Other Other 0 1386 433 5886 65 20 61 chr18 17897138 17898041 -68090893 - SVA Other Other -520 866 1 859 181 18 0 chr18 17898076 17898247 -68090687 - L1 LINE L1 -1510 4636 4463 231 288 55 0 chr18 17898257 17898330 -68090604 - L1ME3A LINE L1 -373 5789 5713 594 273 116 34 chr18 17898423 17899152 -68089782 - L1ME3A LINE L1 -606 5556 4752 2397 156 15 7 chr18 17899720 17900123 -68088811 - L1MC1 LINE L1 -1 6332 5927 2616 124 23 5 chr18 17900128 17900524 -68088410 - Tigger1 DNA MER2_type 0 2418 2016 1123 195 144 57 chr18 17902661 17902994 -68085940 - MLT1A1 LTR MaLR -3 362 1 1647 128 78 43 chr18 17903357 17903639 -68085295 + AluJo SINE Alu 13 304 -8 347 233 94 56 chr18 17903804 17903984 -68084950 - L1ME4a LINE L1 0 6121 5935 2547 58 0 0 chr18 17904019 17904314 -68084620 + AluY SINE Alu 1 295 -16 238 224 69 0 chr18 17906534 17906592 -68082342 - L2 LINE L2 -15 3257 3196 26 30 0 0 chr18 17907161 17907194 -68081740 + AT_rich Low_complexity Low_complexity 1 33 0 225 189 0 0 chr18 17907943 17907980 -68080954 - MIR SINE MIR -7 255 219 283 314 12 0 chr18 17909501 17909587 -68079347 - MLT1L LTR MaLR -92 523 437 361 293 8 32 chr18 17909999 17910101 -68078833 - MER5B DNA MER1_type -27 151 51 216 0 0 0 chr18 17910101 17910125 -68078809 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 361 293 8 32 chr18 17910125 17910145 -68078789 - MER5B DNA MER1_type -127 51 32 1197 268 88 40 chr18 17913507 17913928 -68075006 + MLT1J LTR MaLR 28 468 -43 9220 154 30 22 chr18 17914521 17916182 -68072752 + L1M4c LINE L1 7 1681 -4703 541 206 105 67 chr18 17916184 17916393 -68072541 + MER21B LTR ERV1 632 848 -15 397 260 29 10 chr18 17916882 17916986 -68071948 - L2 LINE L2 -2 3311 3206 1262 179 55 119 chr18 17917038 17917508 -68071426 - LTR8A LTR ERV1 0 727 288 1586 221 19 33 chr18 17918230 17918751 -68070183 - LTR24-int LTR ERV1 -4471 652 1 995 141 27 137 chr18 17918751 17919013 -68069921 - LTR24 LTR ERV1 0 467 235 2352 140 17 33 chr18 17919013 17919434 -68069500 - LTR45 LTR ERV1 -1 524 111 4215 210 28 8 chr18 17920415 17921252 -68067682 + L1PA13 LINE L1 1 853 -5934 21 0 0 0 chr18 17921484 17921505 -68067429 + AT_rich Low_complexity Low_complexity 1 21 0 199 343 87 39 chr18 17922069 17922276 -68066658 + L2 LINE L2 3097 3313 0 1582 258 82 2 chr18 17922724 17923173 -68065761 - MER110 LTR ERV1 -6 485 1 41581 67 8 2 chr18 17923729 17929852 -68059082 - L1PA5 LINE L1 -1 6153 5 616 307 74 31 chr18 17929852 17930178 -68058756 - MER110-int LTR ERV1 -468 4179 3840 1186 268 55 65 chr18 17930227 17930735 -68058199 - MER110-int LTR ERV1 -889 3758 3256 2364 69 31 0 chr18 17930735 17931024 -68057910 - AluY SINE Alu -13 298 1 1186 268 55 65 chr18 17931024 17931150 -68057784 - MER110-int LTR ERV1 -1391 3256 3130 436 190 13 0 chr18 17931216 17931295 -68057639 + MLT1D LTR MaLR 1 80 -425 1811 254 45 29 chr18 17931359 17932200 -68056734 - L1MEc LINE L1 -2329 4628 3774 5147 149 14 9 chr18 17932205 17933529 -68055405 - L1PA16 LINE L1 -5 6161 4829 1224 122 75 23 chr18 17933529 17933743 -68055191 - THE1B LTR MaLR -139 225 1 1274 187 44 3 chr18 17933743 17934037 -68054897 - L1 LINE L1 -1369 4777 4472 1157 256 7 10 chr18 17934044 17934462 -68054472 - L1MEc LINE L1 -3182 3775 3359 2277 98 38 0 chr18 17934524 17934870 -68054064 - L1PA14 LINE L1 -86 6075 5717 1061 276 78 18 chr18 17934875 17935599 -68053335 - L1MEc LINE L1 -3603 3354 2627 1955 168 0 23 chr18 17935638 17935983 -68052951 - MER1B DNA MER1_type 0 337 1 4268 270 24 50 chr18 17936302 17937839 -68051095 - L1MEc LINE L1 -5352 1507 11 22 70 0 0 chr18 17938549 17938592 -68050342 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr18 17939071 17939100 -68049834 + AT_rich Low_complexity Low_complexity 1 29 0 885 283 72 12 chr18 17939182 17939613 -68049321 - L1M3c LINE L1 -4770 1371 915 945 257 64 20 chr18 17941079 17941536 -68047398 - L1MC/D LINE L1 -650 5592 5114 292 259 61 57 chr18 17942209 17942471 -68046463 + L1ME2 LINE L1 5875 6137 -27 23 54 0 0 chr18 17943989 17944026 -68044908 + AT_rich Low_complexity Low_complexity 1 37 0 31 44 0 0 chr18 17944056 17944101 -68044833 + AT_rich Low_complexity Low_complexity 1 45 0 8269 185 26 12 chr18 17944101 17946808 -68042126 - L1PA16 LINE L1 -89 6077 3327 672 282 8 0 chr18 17946801 17947042 -68041892 - L1MC/D LINE L1 -3319 2827 2585 * 1742 210 38 13 chr18 17947140 17947380 -68041554 - L1P LINE L1 -3505 2641 2408 2435 87 3 6 chr18 17947380 17947692 -68041242 - AluY SINE Alu 0 311 1 1742 210 38 13 chr18 17947692 17947987 -68040947 - L1P LINE L1 -3738 2408 2087 1985 211 15 47 chr18 17947997 17948533 -68040401 + MER67B LTR ERV1 131 649 -12 185 266 0 13 chr18 17948545 17948624 -68040310 + (CATATA)n Simple_repeat Simple_repeat 4 81 0 321 306 16 8 chr18 17948659 17948780 -68040154 - HAL1 LINE L1 -1616 891 770 192 269 15 60 chr18 17949271 17949338 -68039596 - MIR SINE MIR -31 231 168 186 43 0 0 chr18 17950436 17950459 -68038475 + (CA)n Simple_repeat Simple_repeat 2 24 0 39830 58 6 1 chr18 17951120 17957234 -68031700 + L1PA5 LINE L1 3 6148 -6 22 0 0 0 chr18 17957234 17957256 -68031678 + AT_rich Low_complexity Low_complexity 1 22 0 2193 117 0 0 chr18 17959366 17959704 -68029230 - AluSx SINE Alu 0 338 1 3109 66 21 0 chr18 17960599 17961023 -68027911 - THE1B-int LTR MaLR -1147 433 1 1968 137 71 31 chr18 17961023 17961373 -68027561 - THE1B LTR MaLR 0 364 1 274 291 0 47 chr18 17962114 17962200 -68026734 - MIR SINE MIR -82 180 99 23 0 0 0 chr18 17962690 17962713 -68026221 + AT_rich Low_complexity Low_complexity 1 23 0 2165 122 0 45 chr18 17964055 17964408 -68024526 - MER1B DNA MER1_type 0 337 1 234 294 11 0 chr18 17964835 17964927 -68024007 + L1MC1 LINE L1 3786 3878 -2268 4705 216 42 11 chr18 17965395 17966449 -68022485 + L1MC1 LINE L1 4488 5508 -825 2550 72 0 0 chr18 17966449 17966753 -68022181 - AluSc SINE Alu -5 304 1 4705 216 42 11 chr18 17966753 17967392 -68021542 + L1MC1 LINE L1 5508 6247 -86 2345 140 39 25 chr18 17967392 17967829 -68021105 - MER65A LTR ERV1 0 445 3 4705 216 42 11 chr18 17967829 17967918 -68021016 + L1MC1 LINE L1 6247 6332 -1 21 0 0 0 chr18 17967941 17967962 -68020972 + AT_rich Low_complexity Low_complexity 1 21 0 28 71 0 0 chr18 17968086 17968142 -68020792 + AT_rich Low_complexity Low_complexity 1 56 0 22 0 0 0 chr18 17968174 17968196 -68020738 + AT_rich Low_complexity Low_complexity 1 22 0 30 0 0 0 chr18 17968756 17968786 -68020148 + AT_rich Low_complexity Low_complexity 1 30 0 1200 161 92 82 chr18 17968814 17969106 -68019828 - AluJo SINE Alu -17 295 1 2020 139 0 0 chr18 17969201 17969520 -68019414 + AluSx SINE Alu 1 319 0 467 198 12 0 chr18 17969761 17969847 -68019087 + AluS SINE Alu 1 87 -225 1125 284 65 43 chr18 17971577 17972597 -68016337 + L1M1 LINE L1 12 1041 -6524 243 313 113 0 chr18 17972601 17972751 -68016183 + L1 LINE L1 652 818 -6671 242 255 0 0 chr18 17972889 17972940 -68015994 + L1 LINE L1 1884 1934 -4631 308 174 42 55 chr18 17972942 17973057 -68015877 + L1 LINE L1 2314 2434 -4131 * 1136 189 28 2 chr18 17973040 17973503 -68015431 + L1 LINE L1 5076 5590 -1975 26 30 0 0 chr18 17973525 17973558 -68015376 + AT_rich Low_complexity Low_complexity 1 33 0 288 266 68 47 chr18 17975626 17975818 -68013116 + L1ME2 LINE L1 5873 6068 -96 30 27 0 0 chr18 17975868 17975905 -68013029 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr18 17977324 17977356 -68011578 + AT_rich Low_complexity Low_complexity 1 32 0 324 301 172 45 chr18 17977700 17978610 -68010324 - L2 LINE L2 -51 3262 2224 495 167 0 0 chr18 17978867 17978951 -68009983 + MER67A LTR ERV1 1 84 -459 2039 205 86 31 chr18 17978991 17979576 -68009358 + MER67B LTR ERV1 45 661 0 234 143 14 43 chr18 17979580 17979650 -68009284 + (CATATA)n Simple_repeat Simple_repeat 4 71 0 1739 177 22 64 chr18 17979681 17980088 -68008846 - MER57A LTR ERV1 0 403 14 298 289 58 36 chr18 17980100 17980325 -68008609 - HAL1 LINE L1 -1509 998 769 1894 216 35 6 chr18 17980416 17980901 -68008033 - L1 LINE L1 -1990 5575 5077 1001 212 65 10 chr18 17980898 17981285 -68007649 - L1 LINE L1 -4139 2426 2021 * 354 302 43 0 chr18 17981414 17981553 -68007381 - L1 LINE L1 -6683 806 662 1442 270 65 38 chr18 17981720 17982575 -68006359 - L1 LINE L1 -6590 899 13 985 193 0 0 chr18 17982649 17982815 -68006119 - FRAM SINE Alu -12 164 1 2110 124 3 3 chr18 17984295 17984593 -68004341 - AluSx SINE Alu -14 298 1 2690 218 128 32 chr18 17986027 17987014 -68001920 + L1MD2 LINE L1 5193 6255 -104 364 269 57 36 chr18 17987048 17987241 -68001693 - MIR SINE MIR -3 259 63 198 103 0 0 chr18 17988244 17988273 -68000661 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 229 94 31 0 chr18 17988273 17988305 -68000629 - Alu SINE Alu -16 117 85 1997 143 0 3 chr18 17988315 17988602 -68000332 - AluSx SINE Alu -26 286 1 24 0 0 0 chr18 17988779 17988803 -68000131 + AT_rich Low_complexity Low_complexity 1 24 0 1005 233 98 51 chr18 17989210 17989738 -67999196 + L1M4 LINE L1 2513 3065 -3081 7512 224 42 19 chr18 17992664 17994309 -67994625 + L1M1 LINE L1 14 1695 -5870 683 238 27 7 chr18 17994310 17994457 -67994477 + LTR28 LTR ERV1 1 150 -870 376 200 97 18 chr18 17994508 17994635 -67994299 + MER52A LTR ERV1 545 658 -136 3167 212 51 11 chr18 17994635 17994942 -67993992 + L1M1 LINE L1 3502 3795 -3770 2234 89 0 80 chr18 17994942 17995269 -67993665 + AluSp SINE Alu 1 301 -12 3167 212 51 11 chr18 17995269 17995897 -67993037 + L1M1 LINE L1 3795 4478 -3087 3032 201 21 16 chr18 17995901 17996856 -67992078 + L1PB2 LINE L1 4577 5529 -622 2112 107 23 3 chr18 17996865 17997174 -67991760 + L1PB2 LINE L1 5829 6143 -8 5522 179 68 64 chr18 17997192 17997356 -67991578 + L1M1 LINE L1 4511 4673 -2892 2123 128 0 6 chr18 17997356 17997668 -67991266 + AluSx SINE Alu 1 310 -2 5522 179 68 64 chr18 17997668 17999109 -67989825 + L1M1 LINE L1 4673 6122 -1443 1150 121 35 15 chr18 17999108 17999307 -67989627 - L1MA3 LINE L1 -398 5907 5705 * 656 121 0 10 chr18 17999307 17999406 -67989528 + MER4A LTR ERV1 1 98 -566 1544 128 93 24 chr18 17999406 17999727 -67989207 + MER4A LTR ERV1 263 664 0 2556 196 39 7 chr18 17999727 18000697 -67988237 - L1MA3 LINE L1 -597 5708 4706 1849 167 50 10 chr18 18000700 18001083 -67987851 + L1MA2 LINE L1 5907 6304 0 30 27 0 0 chr18 18001083 18001120 -67987814 + AT_rich Low_complexity Low_complexity 1 37 0 311 250 92 58 chr18 18001322 18001442 -67987492 + L1MB2 LINE L1 206 329 -5562 464 272 60 9 chr18 18001506 18001738 -67987196 + L1MB2 LINE L1 4436 4679 -1291 * 944 250 86 9 chr18 18001736 18002060 -67986874 + L1MB2 LINE L1 5499 5847 -148 348 201 92 3 chr18 18002056 18002090 -67986844 + L1MB2 LINE L1 2543 2573 -3397 * 763 107 41 0 chr18 18002090 18002211 -67986723 - L1PA13 LINE L1 -3 6160 6035 348 201 92 3 chr18 18002211 18002328 -67986606 + L1MB2 LINE L1 2573 2708 -3262 * 1939 263 68 24 chr18 18002322 18002858 -67986076 + L1MB2 LINE L1 4332 4843 -1164 2062 134 0 14 chr18 18002858 18003149 -67985785 + AluSq SINE Alu 1 287 -26 1939 263 68 24 chr18 18003149 18003612 -67985322 + L1MB2 LINE L1 4843 5371 -636 973 222 52 71 chr18 18003618 18003700 -67985234 + L1MB2 LINE L1 5458 5540 -455 2146 166 49 7 chr18 18003700 18004111 -67984823 - MSTA LTR MaLR 0 428 1 973 222 52 71 chr18 18004111 18004199 -67984735 + L1MB2 LINE L1 5540 5628 -367 2376 86 0 0 chr18 18004199 18004491 -67984443 - AluY SINE Alu -19 292 1 973 222 52 71 chr18 18004491 18004684 -67984250 + L1MB2 LINE L1 5628 5815 -180 * 988 296 32 97 chr18 18004676 18005457 -67983477 + L1MA9 LINE L1 118 847 -5108 699 208 54 32 chr18 18005535 18005756 -67983178 + L1MA9 LINE L1 3981 4206 -1828 593 221 25 0 chr18 18005767 18005889 -67983045 - AluJb SINE Alu -187 125 1 2995 216 87 31 chr18 18005889 18007619 -67981315 + L1MA9 LINE L1 4196 6173 -27 342 233 111 74 chr18 18007652 18007841 -67981093 + MER6B DNA MER2_type 2 197 -13 210 271 0 14 chr18 18007848 18007918 -67981016 + (TA)n Simple_repeat Simple_repeat 2 70 0 1226 97 15 46 chr18 18008087 18008282 -67980652 - MER30B DNA MER1_type 0 190 2 2124 36 0 0 chr18 18008916 18009163 -67979771 - L1PA5 LINE L1 -3 6151 5905 180 0 0 0 chr18 18009352 18009372 -67979562 + (A)n Simple_repeat Simple_repeat 1 20 0 1854 151 14 7 chr18 18009570 18009854 -67979080 + AluSx SINE Alu 1 286 -26 2509 72 0 10 chr18 18010023 18010327 -67978607 + AluSq SINE Alu 1 301 -12 263 294 73 29 chr18 18010923 18011059 -67977875 + MER5B DNA MER1_type 13 154 -24 198 348 185 7 chr18 18011089 18011224 -67977710 - MER5A DNA MER1_type 0 189 31 198 265 15 98 chr18 18011458 18011590 -67977344 - MIR SINE MIR -9 253 133 2338 94 0 3 chr18 18011822 18012119 -67976815 - AluSq SINE Alu -17 296 1 1525 222 79 22 chr18 18014089 18014141 -67974793 - MER67C LTR ERV1 -5 705 657 2381 49 0 14 chr18 18014141 18014447 -67974487 + AluY SINE Alu 1 302 0 1525 222 79 22 chr18 18014447 18014824 -67974110 - MER67C LTR ERV1 -53 657 156 315 0 0 0 chr18 18014824 18014859 -67974075 + (CA)n Simple_repeat Simple_repeat 2 36 0 1525 222 79 22 chr18 18014859 18015025 -67973909 - MER67C LTR ERV1 -554 156 1 990 237 82 9 chr18 18015772 18016089 -67972845 - MER21B LTR ERV1 -107 756 417 536 242 52 58 chr18 18016144 18016570 -67972364 + MER92B LTR ERV1 54 516 -120 1396 253 34 23 chr18 18017675 18018062 -67970872 + MER93a LTR ERV1 2 392 -10 554 236 133 18 chr18 18018991 18019063 -67969871 - MER33 DNA MER1_type -2275 310 248 1943 125 59 0 chr18 18019063 18019351 -67969583 + AluSg SINE Alu 3 307 -3 554 236 133 18 chr18 18019351 18019503 -67969431 - MER33 DNA MER1_type -2337 248 60 456 274 45 25 chr18 18019822 18019979 -67968955 + MER5B DNA MER1_type 1 160 -18 230 307 129 10 chr18 18020462 18020664 -67968270 - L1ME3A LINE L1 -9 6161 5936 29 70 0 0 chr18 18022989 18023046 -67965888 + AT_rich Low_complexity Low_complexity 1 57 0 2094 94 77 0 chr18 18023457 18023744 -67965190 + AluSg SINE Alu 1 309 -1 1404 190 25 65 chr18 18025636 18025957 -67962977 + AluJo SINE Alu 1 308 -4 219 306 16 0 chr18 18026236 18026298 -67962636 - L2 LINE L2 0 3313 3251 1966 135 6 45 chr18 18026504 18026815 -67962119 + AluSx SINE Alu 1 299 -13 1029 104 0 0 chr18 18026817 18026951 -67961983 + AluSq/x SINE Alu 1 134 -178 1928 132 3 10 chr18 18027573 18027862 -67961072 - AluSx SINE Alu -25 287 1 2175 123 3 0 chr18 18027873 18028166 -67960768 - AluSg SINE Alu -16 294 1 246 136 0 0 chr18 18033638 18033682 -67955252 + (GGGA)n Simple_repeat Simple_repeat 1 44 0 207 324 73 15 chr18 18036459 18036595 -67952339 - MIR SINE MIR -97 165 22 1780 115 0 0 chr18 18037313 18037547 -67951387 - AluSq SINE Alu -79 234 1 598 258 48 22 chr18 18037554 18037783 -67951151 - L1M4 LINE L1 -3069 3077 2843 1160 210 13 18 chr18 18037957 18038181 -67950753 + MER58A DNA MER1_type 1 223 -1 1457 160 64 29 chr18 18038190 18038503 -67950431 + MER33 DNA MER1_type 1 324 0 24 67 0 0 chr18 18039075 18039120 -67949814 + AT_rich Low_complexity Low_complexity 1 45 0 2328 74 0 0 chr18 18040412 18040726 -67948208 - AluY SINE Alu 0 315 2 2017 122 7 20 chr18 18040739 18041043 -67947891 - AluSg1 SINE Alu -9 300 1 2119 105 17 7 chr18 18041381 18041676 -67947258 - AluSg SINE Alu -12 298 1 23 78 0 0 chr18 18041870 18041921 -67947013 + AT_rich Low_complexity Low_complexity 1 51 0 1998 140 0 0 chr18 18043747 18044039 -67944895 - AluSx SINE Alu -14 298 7 8889 220 53 24 chr18 18044372 18045004 -67943930 + L1MC4a LINE L1 2658 3270 -2876 1913 153 10 3 chr18 18045004 18045299 -67943635 + AluSx SINE Alu 1 297 -15 8889 220 53 24 chr18 18045299 18047232 -67941702 + L1MC4a LINE L1 3270 5299 -847 2215 123 0 0 chr18 18047368 18047668 -67941266 + AluSg SINE Alu 1 300 -10 22 0 0 0 chr18 18047812 18047834 -67941100 + AT_rich Low_complexity Low_complexity 1 22 0 2797 129 45 98 chr18 18047905 18048525 -67940409 + L1MB2 LINE L1 5584 6170 -1 41943 67 9 3 chr18 18048802 18054214 -67934720 + L1P2 LINE L1 13 5443 -712 1746 234 77 11 chr18 18054233 18054698 -67934236 - L1ME1 LINE L1 -9 6157 5662 953 135 26 47 chr18 18054933 18055126 -67933808 - L1MA9 LINE L1 0 6312 6124 394 365 48 23 chr18 18055127 18055565 -67933369 + L1MC4a LINE L1 5452 5900 -1908 1298 125 21 0 chr18 18055732 18055924 -67933010 - AluSg/x SINE Alu 0 312 117 2206 114 7 0 chr18 18055951 18056248 -67932686 + AluSp SINE Alu 1 299 -14 1016 149 47 56 chr18 18056339 18056554 -67932380 + L1MB7 LINE L1 5885 6097 -87 335 131 0 57 chr18 18056585 18056707 -67932227 + (CAGGG)n Simple_repeat Simple_repeat 2 116 0 383 153 0 95 chr18 18056731 18056920 -67932014 + (CAGGG)n Simple_repeat Simple_repeat 1 171 0 * 394 270 49 0 chr18 18056814 18056977 -67931957 + (CTAGGG)n Simple_repeat Simple_repeat 1 171 0 341 161 0 91 chr18 18056935 18057339 -67931595 + (CAGGG)n Simple_repeat Simple_repeat 1 367 0 * 201 119 0 94 chr18 18057421 18057580 -67931354 + (CAGGG)n Simple_repeat Simple_repeat 1 144 0 376 229 72 6 chr18 18057639 18057805 -67931129 + (CTAGGG)n Simple_repeat Simple_repeat 2 178 0 203 174 0 47 chr18 18057879 18057965 -67930969 + (CAGGG)n Simple_repeat Simple_repeat 5 86 0 43158 53 5 1 chr18 18058110 18063991 -67924943 - L1PA6 LINE L1 -246 5908 11 812 171 8 0 chr18 18064032 18064155 -67924779 + FLAM_C SINE Alu 2 125 -18 336 332 90 42 chr18 18064814 18065148 -67923786 - L1ME3A LINE L1 -27 6143 5794 5595 119 12 2 chr18 18065172 18066004 -67922930 - L1PA16 LINE L1 -11 6155 5316 518 167 0 56 chr18 18066104 18066248 -67922686 + L1P3 LINE L1 1463 1598 -4863 29445 55 3 11 chr18 18066479 18070297 -67918637 + L1P3 LINE L1 1753 5541 -920 28 29 0 0 chr18 18071574 18071609 -67917325 + AT_rich Low_complexity Low_complexity 1 35 0 2058 142 3 0 chr18 18071651 18071960 -67916974 - AluSx SINE Alu -2 310 1 274 189 47 31 chr18 18071972 18072099 -67916835 + (TA)n Simple_repeat Simple_repeat 2 130 0 225 326 43 7 chr18 18072301 18072442 -67916492 + L1ME LINE L1 5531 5676 -445 24 77 0 0 chr18 18073016 18073068 -67915866 + AT_rich Low_complexity Low_complexity 1 52 0 239 229 0 0 chr18 18073145 18073193 -67915741 - L2 LINE L2 -1 3271 3224 382 214 100 50 chr18 18073656 18073796 -67915138 - MER104 DNA Tc2 0 180 34 1684 186 0 7 chr18 18073896 18074192 -67914742 + AluJo SINE Alu 1 294 -18 457 249 181 49 chr18 18074196 18074401 -67914533 - MIR SINE MIR -11 251 20 231 274 129 48 chr18 18076079 18076203 -67912731 - MER5A DNA MER1_type 0 189 56 319 206 290 47 chr18 18076215 18076322 -67912612 + FLAM_A SINE Alu 1 133 0 21 57 0 0 chr18 18076979 18077014 -67911920 + AT_rich Low_complexity Low_complexity 1 35 0 415 267 82 21 chr18 18077235 18077473 -67911461 + Charlie8 DNA MER1_type 78 1416 -1001 21 0 0 0 chr18 18077854 18077875 -67911059 + AT_rich Low_complexity Low_complexity 1 21 0 187 275 184 18 chr18 18078537 18078646 -67910288 - L2 LINE L2 0 3272 3146 2084 123 11 0 chr18 18079346 18079630 -67909304 - AluSc SINE Alu -22 287 1 237 132 0 0 chr18 18079679 18079717 -67909217 + (TTG)n Simple_repeat Simple_repeat 2 39 0 647 169 127 0 chr18 18080551 18080693 -67908241 - FLAM_C SINE Alu 0 157 1 21 0 0 0 chr18 18081508 18081529 -67907405 + AT_rich Low_complexity Low_complexity 1 21 0 622 208 0 0 chr18 18081645 18081751 -67907183 + U6 snRNA snRNA 1 106 -1 22 0 0 0 chr18 18083018 18083040 -67905894 + AT_rich Low_complexity Low_complexity 1 22 0 21 71 0 0 chr18 18083268 18083310 -67905624 + AT_rich Low_complexity Low_complexity 1 42 0 2081 195 35 14 chr18 18083310 18083735 -67905199 - Tigger2a DNA MER2_type 0 434 1 263 300 0 0 chr18 18083990 18084050 -67904884 + (CA)n Simple_repeat Simple_repeat 2 61 0 863 187 0 0 chr18 18084345 18084484 -67904450 - FAM SINE Alu -25 160 22 1390 152 0 103 chr18 18084565 18084867 -67904067 - AluJb SINE Alu -41 271 1 2535 198 46 7 chr18 18085231 18085772 -67903162 - MER68 LTR ERV1 0 562 1 23 54 0 0 chr18 18085805 18085842 -67903092 + AT_rich Low_complexity Low_complexity 1 37 0 24 96 0 0 chr18 18086001 18086074 -67902860 + AT_rich Low_complexity Low_complexity 1 73 0 27 0 0 0 chr18 18086178 18086205 -67902729 + AT_rich Low_complexity Low_complexity 1 27 0 2187 110 7 10 chr18 18086328 18086637 -67902297 - AluSx SINE Alu -4 308 1 31 0 0 0 chr18 18086637 18086668 -67902266 + AT_rich Low_complexity Low_complexity 1 31 0 1918 156 17 0 chr18 18086705 18087000 -67901934 - AluSq SINE Alu -13 300 1 2377 153 4 40 chr18 18087010 18087466 -67901468 - L1MC1 LINE L1 0 6333 5894 833 125 44 0 chr18 18088470 18088606 -67900328 - Tigger7 DNA MER2_type 0 2487 2346 605 166 45 25 chr18 18088606 18088763 -67900171 + MER21A LTR ERV1 748 907 -24 630 224 0 24 chr18 18089207 18089332 -67899602 - FLAM_A SINE Alu -15 127 6 284 350 80 31 chr18 18089488 18089714 -67899220 - MIR SINE MIR -6 256 20 183 352 57 0 chr18 18090339 18090427 -67898507 - MIR SINE MIR -121 141 49 25 0 0 0 chr18 18091402 18091427 -67897507 + AT_rich Low_complexity Low_complexity 1 25 0 670 196 0 0 chr18 18092733 18092840 -67896094 + FLAM_A SINE Alu 1 107 -35 1929 137 0 67 chr18 18093093 18093407 -67895527 + AluSx SINE Alu 1 293 -19 805 202 42 75 chr18 18093703 18093916 -67895018 - AluJb SINE Alu -94 218 13 28 71 0 0 chr18 18094012 18094068 -67894866 + AT_rich Low_complexity Low_complexity 1 56 0 5979 41 14 0 chr18 18094299 18095059 -67893875 - L1PA5 LINE L1 -8 6146 5376 1611 199 0 7 chr18 18095445 18095727 -67893207 - AluJb SINE Alu -30 282 3 1370 240 0 24 chr18 18095761 18096057 -67892877 + AluJo SINE Alu 1 289 -23 2237 108 0 3 chr18 18096253 18096550 -67892384 + AluY SINE Alu 1 296 -15 256 195 195 12 chr18 18097420 18097502 -67891432 - MER5A DNA MER1_type -83 106 10 294 148 0 0 chr18 18099680 18099734 -67889200 + (TG)n Simple_repeat Simple_repeat 1 54 0 1868 172 0 0 chr18 18100727 18101030 -67887904 - AluSx SINE Alu -4 308 6 22 56 0 0 chr18 18101142 18101178 -67887756 + AT_rich Low_complexity Low_complexity 1 36 0 2028 140 7 0 chr18 18102799 18103119 -67885815 + AluSp SINE Alu 1 322 0 1937 162 7 0 chr18 18103550 18103852 -67885082 + AluSx SINE Alu 1 304 -8 194 225 0 0 chr18 18104134 18104174 -67884760 + L2 LINE L2 3262 3301 -12 1446 236 30 0 chr18 18104397 18104693 -67884241 - AluJo SINE Alu -7 305 1 26 30 0 0 chr18 18105382 18105415 -67883519 + AT_rich Low_complexity Low_complexity 1 33 0 622 58 23 0 chr18 18107415 18107501 -67881433 + L1PA5 LINE L1 6066 6153 -1 183 129 0 0 chr18 18108802 18108833 -67880101 + (A)n Simple_repeat Simple_repeat 1 31 0 21 57 0 0 chr18 18109076 18109111 -67879823 + AT_rich Low_complexity Low_complexity 1 35 0 24 53 0 0 chr18 18109177 18109215 -67879719 + AT_rich Low_complexity Low_complexity 1 38 0 24 67 0 0 chr18 18109291 18109336 -67879598 + AT_rich Low_complexity Low_complexity 1 45 0 198 0 0 0 chr18 18109524 18109546 -67879388 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2026 139 0 3 chr18 18109552 18109847 -67879087 - AluSq SINE Alu -19 294 1 480 278 77 12 chr18 18109966 18110211 -67878723 + L1MB7 LINE L1 5401 5659 -478 28 0 0 0 chr18 18110282 18110310 -67878624 + AT_rich Low_complexity Low_complexity 1 28 0 2601 143 82 28 chr18 18113315 18115432 -67873502 + SVA Other Other 343 868 -535 2371 145 44 77 chr18 18116208 18116752 -67872182 + SVA Other Other 343 868 -518 1834 168 65 17 chr18 18116796 18117213 -67871721 + SVA Other Other 432 868 -518 5333 123 60 30 chr18 18117259 18118185 -67870749 + SVA Other Other 433 1386 0 862 244 40 15 chr18 18118710 18118984 -67869950 + L1MB7 LINE L1 5904 6184 0 441 320 51 6 chr18 18119706 18119862 -67869072 - L2 LINE L2 -430 2884 2722 1693 219 81 26 chr18 18120925 18121418 -67867516 - L1MB8 LINE L1 -6 6172 5653 181 250 50 0 chr18 18122440 18122500 -67866434 - MIR SINE MIR -2 260 198 1475 186 10 24 chr18 18122520 18122816 -67866118 + AluJo SINE Alu 1 292 -20 2200 139 0 3 chr18 18123245 18123555 -67865379 + AluSx SINE Alu 1 309 -3 2227 118 0 3 chr18 18123903 18124207 -67864727 + AluSg SINE Alu 1 303 -7 204 111 0 0 chr18 18125460 18125496 -67863438 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 1665 128 87 4 chr18 18125500 18125766 -67863168 - AluSg SINE Alu -22 288 1 316 186 0 14 chr18 18126028 18126098 -67862836 + MER34C LTR ERV1 423 491 -94 21 36 0 0 chr18 18126104 18126132 -67862802 + AT_rich Low_complexity Low_complexity 1 28 0 1979 148 3 58 chr18 18126647 18126977 -67861957 + AluSq SINE Alu 1 312 -1 3140 115 44 0 chr18 18127363 18127843 -67861091 - L1PA10 LINE L1 -13 6155 5655 1099 228 91 25 chr18 18127939 18128303 -67860631 - MER4E LTR ERV1 -391 388 1 1093 209 70 13 chr18 18128532 18128848 -67860086 - L1MB8 LINE L1 -12 6166 5833 1925 157 75 5 chr18 18128848 18129259 -67859675 - MER61C LTR ERV1 0 434 11 2247 199 41 44 chr18 18129268 18130332 -67858602 - L1MB8 LINE L1 -342 5836 4771 616 315 94 10 chr18 18131677 18131985 -67856949 - MLT1G1 LTR MaLR -34 561 228 239 275 0 29 chr18 18131987 18132056 -67856878 - MLT1G1 LTR MaLR -419 111 45 1167 163 89 0 chr18 18132093 18132363 -67856571 - L1MA5 LINE L1 -6 6294 6001 1013 243 31 12 chr18 18132430 18132689 -67856245 - AluJo SINE Alu -48 264 1 2699 213 31 32 chr18 18132689 18133813 -67855121 - L1MA5 LINE L1 -354 5946 4824 1481 211 17 27 chr18 18133967 18134261 -67854673 - AluJo SINE Alu -16 296 6 385 257 0 0 chr18 18136685 18136786 -67852148 - L1MA9 LINE L1 -49 6263 6163 1893 144 3 3 chr18 18137736 18138034 -67850900 - AluSg SINE Alu -12 298 1 221 221 0 103 chr18 18138143 18138338 -67850596 + (CAGGA)n Simple_repeat Simple_repeat 3 177 0 * 346 230 79 6 chr18 18138215 18138380 -67850554 + (CTAGGG)n Simple_repeat Simple_repeat 2 178 0 295 240 0 73 chr18 18138341 18138520 -67850414 + (CAGGC)n Simple_repeat Simple_repeat 4 169 0 * 459 152 0 94 chr18 18138443 18138634 -67850300 + (CAGGG)n Simple_repeat Simple_repeat 2 174 0 466 291 30 0 chr18 18138642 18138807 -67850127 + (CTAGGG)n Simple_repeat Simple_repeat 3 172 0 326 303 29 11 chr18 18138839 18139014 -67849920 + (CTAGGG)n Simple_repeat Simple_repeat 1 178 0 465 245 50 0 chr18 18139090 18139329 -67849605 + (CTAGGG)n Simple_repeat Simple_repeat 1 251 0 398 263 53 12 chr18 18139421 18139592 -67849342 + (CTAGGG)n Simple_repeat Simple_repeat 1 178 0 371 294 47 0 chr18 18139610 18139780 -67849154 + (CTAGGG)n Simple_repeat Simple_repeat 1 178 0 210 168 0 59 chr18 18139924 18140025 -67848909 + (CAGGG)n Simple_repeat Simple_repeat 1 95 0 231 202 36 0 chr18 18140053 18140137 -67848797 + (CTAGGG)n Simple_repeat Simple_repeat 2 88 0 377 163 0 113 chr18 18140173 18140376 -67848558 + (CAGGG)n Simple_repeat Simple_repeat 1 180 0 281 143 0 113 chr18 18140421 18140589 -67848345 + (CAGGG)n Simple_repeat Simple_repeat 1 149 0 202 167 8 56 chr18 18140629 18140755 -67848179 + (CAGGG)n Simple_repeat Simple_repeat 1 120 0 320 161 0 51 chr18 18140957 18141094 -67847840 + (CAGGG)n Simple_repeat Simple_repeat 2 131 0 723 239 88 53 chr18 18141931 18142270 -67846664 - HSREP522 Satellite telomeric -152 352 2 5256 219 58 8 chr18 18142401 18143701 -67845233 + L1 LINE L1 2785 4148 -1998 911 177 0 52 chr18 18143701 18143949 -67844985 - HSREP522 Satellite telomeric 0 504 270 4714 120 57 18 chr18 18144093 18145105 -67843829 + SVA Other Other 433 1300 -86 34 0 0 0 chr18 18145208 18145242 -67843692 + AT_rich Low_complexity Low_complexity 1 34 0 253 302 39 23 chr18 18146810 18146939 -67841995 + MLT1L LTR MaLR 126 256 -359 706 299 76 22 chr18 18148127 18148387 -67840547 - L1M4 LINE L1 -2459 3687 3442 2184 106 0 10 chr18 18148387 18148699 -67840235 - AluSc SINE Alu 0 309 1 706 299 76 22 chr18 18148699 18148977 -67839957 - L1M4 LINE L1 -2704 3442 3120 344 168 11 42 chr18 18149449 18149544 -67839390 - L1M4 LINE L1 -2988 3158 3067 * 3822 215 38 16 chr18 18149523 18149932 -67839002 - L1 LINE L1 -2228 3918 3520 194 62 31 0 chr18 18149932 18149964 -67838970 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 3822 215 38 16 chr18 18149964 18150641 -67838293 - L1 LINE L1 -2626 3520 2808 231 125 0 0 chr18 18150661 18150701 -67838233 + Alu SINE Alu 262 301 -1 1106 135 16 2 chr18 18150719 18150968 -67837966 - MER57B LTR ERV1 -4 430 126 875 206 101 38 chr18 18151068 18151335 -67837599 - MSTA LTR MaLR -69 359 76 416 255 11 0 chr18 18151340 18151434 -67837500 + MST-int LTR MaLR 976 1070 -581 * 593 187 53 33 chr18 18151431 18151581 -67837353 + THE1-int LTR MaLR 1039 1191 -389 320 179 18 0 chr18 18151569 18151625 -67837309 - THE1-int LTR MaLR -613 967 911 * 3794 102 29 6 chr18 18151696 18152246 -67836688 + LTR6A LTR ERV1 1 563 -1 493 168 21 0 chr18 18152277 18152372 -67836562 - MSTA LTR MaLR -331 97 1 1305 171 57 51 chr18 18152372 18152705 -67836229 - MSTA-int LTR MaLR 0 1651 1317 247 312 75 0 chr18 18152711 18152804 -67836130 - MSTA LTR MaLR -269 159 60 442 225 21 6 chr18 18152840 18152951 -67835983 - MSTA LTR MaLR -248 116 1 529 188 9 0 chr18 18152951 18153063 -67835871 - MSTA-int LTR MaLR 0 1651 1539 4844 234 67 30 chr18 18153063 18154371 -67834563 - MSTA-int LTR MaLR -262 1389 34 478 195 180 8 chr18 18154378 18154506 -67834428 + MST-int LTR MaLR 510 659 -992 962 235 70 14 chr18 18154542 18154827 -67834107 - MSTA LTR MaLR -52 376 76 768 231 193 21 chr18 18154831 18155074 -67833860 + THE1-int LTR MaLR 907 1191 -389 270 214 18 0 chr18 18155062 18155118 -67833816 - THE1-int LTR MaLR -613 967 911 * 284 213 33 0 chr18 18155235 18155296 -67833638 - MSTA LTR MaLR -363 65 3 1124 229 43 43 chr18 18155298 18155625 -67833309 - MSTA-int LTR MaLR 0 1651 1325 298 255 113 9 chr18 18155625 18155731 -67833203 - MSTA LTR MaLR -252 176 60 433 237 21 0 chr18 18155780 18155877 -67833057 - MSTA LTR MaLR -329 99 1 5973 232 69 21 chr18 18155877 18157426 -67831508 - MSTA-int LTR MaLR 0 1651 28 515 193 148 30 chr18 18157416 18157575 -67831359 + MST-int LTR MaLR 461 661 -963 * 867 253 55 49 chr18 18157583 18157891 -67831043 - MSTA LTR MaLR -43 385 76 721 228 191 21 chr18 18157895 18158136 -67830798 + THE1-int LTR MaLR 907 1188 -392 225 193 35 35 chr18 18158127 18158184 -67830750 - THE1-int LTR MaLR -613 967 911 * 493 179 20 1 chr18 18158273 18158376 -67830558 - MSTA LTR MaLR -323 103 1 1052 237 16 38 chr18 18158377 18158694 -67830240 - MSTA-int LTR MaLR -1 1650 1341 325 240 53 13 chr18 18158700 18158775 -67830159 - MSTA LTR MaLR -257 171 94 443 219 10 0 chr18 18158847 18158943 -67829991 - MSTA LTR MaLR -331 97 1 625 143 18 0 chr18 18158943 18159055 -67829879 - MSTA-int LTR MaLR 0 1651 1538 286 233 8 45 chr18 18159071 18159204 -67829730 + (CACCC)n Simple_repeat Simple_repeat 3 130 0 421 202 42 34 chr18 18159208 18159327 -67829607 - MSTA LTR MaLR -308 120 1 1647 174 21 53 chr18 18159327 18159706 -67829228 - MSTA-int LTR MaLR 0 1651 1285 893 181 6 11 chr18 18159810 18159987 -67828947 + MST-int LTR MaLR 1476 1651 0 386 242 50 0 chr18 18159987 18160086 -67828848 + MSTA LTR MaLR 1 104 -324 309 226 32 0 chr18 18160162 18160224 -67828710 + MSTA LTR MaLR 96 159 -269 1427 210 3 40 chr18 18160231 18160578 -67828356 + MSTA-int LTR MaLR 1318 1651 0 505 168 21 0 chr18 18160578 18160673 -67828261 + MSTA LTR MaLR 1 97 -331 249 214 18 0 chr18 18160767 18160823 -67828111 + THE1-int LTR MaLR 911 967 -613 * 1005 176 189 20 chr18 18160811 18161055 -67827879 - THE1-int LTR MaLR -389 1191 907 866 234 82 12 chr18 18161070 18161326 -67827608 + MSTA LTR MaLR 95 368 -60 352 259 27 48 chr18 18161362 18161509 -67827425 - THE1-int LTR MaLR -972 608 465 * 6004 227 48 42 chr18 18161506 18163120 -67825814 + MSTA-int LTR MaLR 28 1651 0 349 242 11 0 chr18 18163120 18163215 -67825719 + MSTA LTR MaLR 1 96 -332 211 173 13 67 chr18 18163235 18163310 -67825624 + G-rich Low_complexity Low_complexity 4 74 0 354 222 0 0 chr18 18163323 18163386 -67825548 + MSTA LTR MaLR 97 159 -269 1369 220 9 46 chr18 18163393 18163738 -67825196 + MSTA-int LTR MaLR 1318 1649 -2 526 144 31 21 chr18 18163740 18163837 -67825097 + MSTA LTR MaLR 1 98 -330 246 232 18 0 chr18 18163932 18163988 -67824946 + THE1-int LTR MaLR 911 967 -613 * 638 248 190 28 chr18 18163941 18164220 -67824714 - THE1-int LTR MaLR -368 1283 907 634 185 106 7 chr18 18164221 18164372 -67824562 + MSTA LTR MaLR 64 229 -199 471 208 50 0 chr18 18164413 18164533 -67824401 - THE1-int LTR MaLR -992 588 463 * 5550 230 52 36 chr18 18164528 18166056 -67822878 + MST-int LTR MaLR 28 1579 -72 243 154 0 0 chr18 18166060 18166099 -67822835 + MST-int LTR MaLR 623 661 -990 313 173 0 0 chr18 18166133 18166185 -67822749 - MSTB LTR MaLR -52 374 323 389 158 26 0 chr18 18166198 18166274 -67822660 + MST-int LTR MaLR 1574 1651 0 406 232 10 0 chr18 18166274 18166373 -67822561 + MSTA LTR MaLR 1 100 -328 323 205 45 89 chr18 18166409 18166521 -67822413 + MSTA LTR MaLR 65 171 -257 1362 219 3 46 chr18 18166521 18166868 -67822066 + MSTA-int LTR MaLR 1320 1651 0 556 135 21 10 chr18 18166868 18166964 -67821970 + MSTA LTR MaLR 1 97 -331 239 232 18 0 chr18 18167049 18167105 -67821829 + MST-int LTR MaLR 979 1035 -616 * 607 253 188 22 chr18 18167103 18167332 -67821602 - THE1-int LTR MaLR -402 1178 912 1082 225 87 30 chr18 18167332 18167630 -67821304 + MSTA LTR MaLR 60 374 -54 374 253 52 39 chr18 18167648 18167802 -67821132 - THE1-int LTR MaLR -963 617 462 * 6070 228 55 24 chr18 18167796 18169372 -67819562 + MSTA-int LTR MaLR 28 1651 0 402 232 10 0 chr18 18169372 18169471 -67819463 + MSTA LTR MaLR 1 100 -328 589 154 36 0 chr18 18169593 18169703 -67819231 + MST-int LTR MaLR 1538 1651 0 449 200 21 0 chr18 18169703 18169798 -67819136 + MSTA LTR MaLR 1 97 -331 271 280 53 13 chr18 18169870 18169945 -67818989 + MSTA LTR MaLR 94 171 -257 1172 227 16 35 chr18 18169951 18170268 -67818666 + MST-int LTR MaLR 1341 1651 0 368 175 48 58 chr18 18170270 18170373 -67818561 + MSTA LTR MaLR 3 104 -324 317 175 18 0 chr18 18170448 18170505 -67818429 + MSTA-int LTR MaLR 910 967 -613 * 470 197 51 43 chr18 18170496 18170613 -67818321 - THE1-int LTR MaLR -392 1188 1071 1839 154 7 0 chr18 18170724 18171016 -67817918 - AluSg SINE Alu -16 294 1 565 180 27 0 chr18 18171509 18171620 -67817314 + MST-int LTR MaLR 1538 1651 0 445 208 10 0 chr18 18171620 18171716 -67817218 + MSTA LTR MaLR 1 97 -331 297 213 41 107 chr18 18171741 18171863 -67817071 + MSTA LTR MaLR 58 171 -257 1138 226 16 38 chr18 18171869 18172187 -67816747 + MSTA-int LTR MaLR 1341 1651 0 460 198 19 5 chr18 18172187 18172291 -67816643 + MSTA LTR MaLR 1 119 -334 777 224 191 21 chr18 18172430 18172671 -67816263 - THE1-int LTR MaLR -392 1188 907 912 239 51 47 chr18 18172694 18172970 -67815964 + MSTA LTR MaLR 96 372 -56 555 183 148 30 chr18 18172990 18173149 -67815785 - MST-int LTR MaLR -963 661 461 * 4657 258 80 7 chr18 18173139 18174409 -67814525 + MSTA-int LTR MaLR 28 1389 -262 501 207 9 0 chr18 18174405 18174521 -67814413 + MSTA-int LTR MaLR 1535 1651 0 * 431 209 9 36 chr18 18174521 18174631 -67814303 + MSTA LTR MaLR 1 107 -321 331 262 103 9 chr18 18174668 18174775 -67814159 + MSTA LTR MaLR 60 176 -252 548 242 12 51 chr18 18174777 18175021 -67813913 + MSTA-int LTR MaLR 1029 1651 0 483 179 21 0 chr18 18175021 18175116 -67813818 + MSTA LTR MaLR 1 97 -331 3588 122 27 5 chr18 18175147 18175698 -67813236 - LTR6A LTR ERV1 -1 563 1 330 145 0 43 chr18 18175869 18175938 -67812996 - MST-int LTR MaLR -268 1383 1318 334 210 32 0 chr18 18175945 18176007 -67812927 - MSTA LTR MaLR -269 159 96 400 232 50 0 chr18 18176082 18176181 -67812753 - MSTA LTR MaLR -324 104 1 5685 233 56 38 chr18 18176181 18177771 -67811163 - MSTA-int LTR MaLR 0 1651 34 331 266 37 9 chr18 18177775 18177884 -67811050 + THE1-int LTR MaLR 466 577 -1003 1001 209 99 32 chr18 18177926 18178208 -67810726 - MSTA LTR MaLR -52 376 76 772 191 191 56 chr18 18178212 18178463 -67810471 + THE1-int LTR MaLR 907 1191 -389 295 200 36 0 chr18 18178451 18178506 -67810428 - THE1-int LTR MaLR -613 967 911 * 3749 108 29 4 chr18 18178577 18179126 -67809808 + LTR6A LTR ERV1 1 563 -1 482 179 21 0 chr18 18179157 18179252 -67809682 - MSTA LTR MaLR -331 97 1 1244 201 50 43 chr18 18179252 18179575 -67809359 - MSTA-int LTR MaLR 0 1651 1327 272 280 103 9 chr18 18179577 18179684 -67809250 - MSTA LTR MaLR -252 176 60 456 204 20 10 chr18 18179733 18179831 -67809103 - MSTA LTR MaLR -329 99 1 517 207 9 0 chr18 18179831 18179947 -67808987 - MSTA-int LTR MaLR 0 1651 1535 * 4722 238 68 25 chr18 18179943 18181249 -67807685 - MSTA-int LTR MaLR -262 1389 28 494 212 167 8 chr18 18181247 18181379 -67807555 + MST-int LTR MaLR 507 659 -992 * 957 249 63 7 chr18 18181415 18181700 -67807234 - MSTA LTR MaLR -52 376 76 690 238 195 22 chr18 18181705 18181936 -67806998 + THE1-int LTR MaLR 908 1178 -402 259 208 21 0 chr18 18181934 18181982 -67806952 - MST-int LTR MaLR -616 1035 987 * 307 197 33 0 chr18 18182113 18182174 -67806760 - MSTA LTR MaLR -363 65 3 1236 220 36 42 chr18 18182176 18182513 -67806421 - MSTA-int LTR MaLR 0 1651 1317 289 275 99 0 chr18 18182519 18182610 -67806324 - MSTA LTR MaLR -269 159 60 469 175 31 10 chr18 18182659 18182756 -67806178 - MSTA LTR MaLR -329 99 1 4493 229 76 26 chr18 18182756 18183922 -67805012 - MSTA-int LTR MaLR 0 1651 427 835 209 11 7 chr18 18183920 18184124 -67804810 - MSTA-int LTR MaLR -1269 102 28 * 534 201 156 10 chr18 18184120 18184271 -67804663 + MST-int LTR MaLR 466 661 -963 * 814 245 85 41 chr18 18184291 18184585 -67804349 - MSTA LTR MaLR -56 372 66 762 228 191 21 chr18 18184589 18184830 -67804104 + THE1-int LTR MaLR 907 1188 -392 315 190 17 0 chr18 18184820 18184878 -67804056 - THE1-int LTR MaLR -612 968 910 * 462 179 23 5 chr18 18184965 18185069 -67803865 - MSTA LTR MaLR -262 113 3 1204 189 31 53 chr18 18185071 18185389 -67803545 - MSTA-int LTR MaLR 0 1651 1341 246 259 54 62 chr18 18185395 18185507 -67803427 - MSTA LTR MaLR -257 171 61 427 226 11 0 chr18 18185542 18185635 -67803299 - MSTA LTR MaLR -331 97 4 502 207 27 0 chr18 18185638 18185749 -67803185 - MSTA-int LTR MaLR 0 1651 1538 426 221 11 0 chr18 18185876 18185971 -67802963 - MSTA LTR MaLR -332 96 1 5958 239 52 22 chr18 18185971 18187542 -67801392 - MSTA-int LTR MaLR 0 1651 34 368 235 160 10 chr18 18187542 18187696 -67801238 + MST-int LTR MaLR 462 661 -963 890 264 63 7 chr18 18187714 18187998 -67800936 - MSTA LTR MaLR -54 374 75 521 259 184 25 chr18 18188006 18188245 -67800689 + MST-int LTR MaLR 976 1252 -399 518 138 43 11 chr18 18188378 18188472 -67800462 - MSTA LTR MaLR -331 97 1 1366 211 3 41 chr18 18188472 18188813 -67800121 - MSTA-int LTR MaLR 0 1651 1324 350 234 149 0 chr18 18188813 18188920 -67800014 - MSTA LTR MaLR -248 180 58 428 232 10 0 chr18 18188965 18189064 -67799870 - MSTA LTR MaLR -328 100 1 387 158 26 0 chr18 18189064 18189140 -67799794 - MSTA-int LTR MaLR 0 1651 1574 290 167 0 37 chr18 18189142 18189196 -67799738 + MSTA LTR MaLR 317 368 -60 243 154 0 0 chr18 18189238 18189277 -67799657 - MSTA-int LTR MaLR -990 661 623 5600 227 54 37 chr18 18189277 18190806 -67798128 - MSTA-int LTR MaLR -68 1583 28 525 222 39 26 chr18 18190801 18190954 -67797980 + MSTA-int LTR MaLR 463 617 -963 * 1112 232 56 4 chr18 18190971 18191238 -67797696 - MSTA LTR MaLR -52 376 96 335 310 10 0 chr18 18191262 18191362 -67797572 + MSTA-int LTR MaLR 907 1007 -573 242 284 14 0 chr18 18191556 18191630 -67797304 - LTR6B LTR ERV1 -342 216 142 320 179 18 0 chr18 18191802 18191858 -67797076 + MSTA-int LTR MaLR 911 967 -613 * 830 203 198 21 chr18 18191846 18192088 -67796846 - THE1-int LTR MaLR -389 1191 907 993 201 95 35 chr18 18192092 18192376 -67796558 + MSTA LTR MaLR 76 376 -52 303 284 37 9 chr18 18192418 18192527 -67796407 - THE1-int LTR MaLR -1003 577 466 5575 233 56 40 chr18 18192531 18194124 -67794810 + MSTA-int LTR MaLR 34 1651 0 380 242 50 0 chr18 18194124 18194223 -67794711 + MSTA LTR MaLR 1 104 -324 305 242 32 0 chr18 18194298 18194360 -67794574 + MSTA LTR MaLR 96 159 -269 1341 220 6 40 chr18 18194367 18194713 -67794221 + MSTA-int LTR MaLR 1318 1651 0 539 158 21 0 chr18 18194713 18194808 -67794126 + MSTA LTR MaLR 1 97 -331 230 234 21 0 chr18 18194907 18194954 -67793980 + THE1-int LTR MaLR 917 964 -616 530 221 25 22 chr18 18194958 18195187 -67793747 - THE1-int LTR MaLR -405 1175 907 937 223 82 12 chr18 18195202 18195458 -67793476 + MSTA LTR MaLR 95 368 -60 417 259 21 14 chr18 18195494 18195637 -67793297 - THE1-int LTR MaLR -972 608 465 * 6061 222 50 43 chr18 18195634 18197247 -67791687 + MSTA-int LTR MaLR 28 1651 0 376 242 10 0 chr18 18197247 18197346 -67791588 + MSTA LTR MaLR 1 100 -328 297 257 9 55 chr18 18197404 18197513 -67791421 + MSTA LTR MaLR 56 159 -269 1424 198 9 48 chr18 18197520 18197853 -67791081 + MST-int LTR MaLR 1318 1637 -14 502 155 21 10 chr18 18197869 18197966 -67790968 + MSTA LTR MaLR 1 98 -330 640 241 198 25 chr18 18198108 18198345 -67790589 - THE1-int LTR MaLR -392 1188 911 1145 180 98 27 chr18 18198345 18198640 -67790294 + MSTA LTR MaLR 61 376 -52 507 240 32 26 chr18 18198657 18198811 -67790123 - THE1-int LTR MaLR -963 617 463 * 5326 242 52 36 chr18 18198806 18200337 -67788597 + MSTA-int LTR MaLR 28 1583 -68 237 154 0 0 chr18 18200337 18200376 -67788558 + MST-int LTR MaLR 623 661 -990 346 161 0 32 chr18 18200410 18200472 -67788462 - MSTA LTR MaLR -52 376 317 377 171 26 0 chr18 18200474 18200550 -67788384 + MST-int LTR MaLR 1574 1651 0 373 263 10 0 chr18 18200550 18200649 -67788285 + MSTA LTR MaLR 1 100 -328 326 204 83 46 chr18 18200695 18200803 -67788131 + MSTA LTR MaLR 65 176 -252 1416 197 12 50 chr18 18200803 18201143 -67787791 + MSTA-int LTR MaLR 1325 1651 0 526 152 30 17 chr18 18201143 18201252 -67787682 + MSTA LTR MaLR 1 113 -251 742 181 242 44 chr18 18201378 18201605 -67787329 - THE1-int LTR MaLR -402 1178 907 931 240 66 28 chr18 18201609 18201897 -67787037 + MSTA LTR MaLR 76 374 -54 368 255 145 9 chr18 18201915 18202070 -67786864 - MST-int LTR MaLR -963 661 463 * 6475 221 57 24 chr18 18202065 18203636 -67785298 + MSTA-int LTR MaLR 28 1651 0 408 202 42 34 chr18 18203636 18203755 -67785179 + MSTA LTR MaLR 1 120 -308 213 195 49 24 chr18 18203759 18203841 -67785093 + (GGGTG)n Simple_repeat Simple_repeat 2 85 0 205 217 22 0 chr18 18203899 18203945 -67784989 + T-rich Low_complexity Low_complexity 5 51 0 207 326 30 15 chr18 18204009 18204144 -67784790 + CT-rich Low_complexity Low_complexity 6 142 0 1030 137 6 16 chr18 18204428 18204610 -67784324 + AluSg/x SINE Alu 119 298 -11 1896 143 17 0 chr18 18204788 18205089 -67783845 + AluSx SINE Alu 1 306 -6 4437 178 29 26 chr18 18205125 18206266 -67782668 + L1PA16 LINE L1 5026 6166 0 2084 125 0 0 chr18 18206419 18206722 -67782212 - AluSc SINE Alu -6 303 1 21 0 0 0 chr18 18207084 18207105 -67781829 + AT_rich Low_complexity Low_complexity 1 21 0 244 258 225 45 chr18 18207633 18207811 -67781123 + L2 LINE L2 2836 3045 -227 1210 216 229 15 chr18 18208668 18209126 -67779808 - L1MC4 LINE L1 -668 7374 6819 324 209 56 44 chr18 18209680 18209866 -67779068 - HSAT5 Satellite Satellite 0 188 1 227 258 0 45 chr18 18209947 18210036 -67778898 - HSAT5 Satellite Satellite -1 85 1 284 215 12 47 chr18 18210055 18210248 -67778686 - HSAT5 Satellite Satellite -1 186 1 237 222 0 0 chr18 18210644 18210707 -67778227 + (CA)n Simple_repeat Simple_repeat 2 64 0 2057 99 90 44 chr18 18210951 18211386 -67777548 - SN5 Other centromeric 0 455 1 1335 237 98 6 chr18 18213465 18213802 -67775132 + MSTA LTR MaLR 1 368 -60 1271 198 8 0 chr18 18213819 18214067 -67774867 + MSTA-int LTR MaLR 1 250 -1401 * 1378 175 8 12 chr18 18214064 18214316 -67774618 + MSTA-int LTR MaLR 1401 1651 0 1313 242 26 47 chr18 18214316 18214700 -67774234 + MSTA LTR MaLR 1 376 -52 470 218 157 7 chr18 18214725 18214872 -67774062 - MST-int LTR MaLR -981 670 502 256 297 30 0 chr18 18214863 18214964 -67773970 + MSTA-int LTR MaLR 28 131 -1449 * 283 164 36 0 chr18 18215081 18215136 -67773798 + MSTA-int LTR MaLR 979 1035 -616 * 875 211 198 21 chr18 18215124 18215366 -67773568 - MSTA-int LTR MaLR -389 1191 907 1261 204 63 7 chr18 18215371 18215655 -67773279 + MSTA LTR MaLR 77 376 -52 500 224 149 2 chr18 18215671 18215822 -67773112 - MST-int LTR MaLR -963 661 466 * 5435 247 61 22 chr18 18215820 18217383 -67771551 + MSTA-int LTR MaLR 28 1651 0 376 242 10 0 chr18 18217383 18217482 -67771452 + MSTA LTR MaLR 1 100 -328 4032 227 48 13 chr18 18217645 18218619 -67770315 - MSTA-int LTR MaLR -616 1035 28 364 241 145 9 chr18 18218614 18218769 -67770165 + MST-int LTR MaLR 463 661 -963 * 1058 246 52 17 chr18 18218787 18219076 -67769858 - MSTA LTR MaLR -54 374 76 770 215 224 21 chr18 18219080 18219317 -67769617 + THE1-int LTR MaLR 907 1191 -389 526 152 30 17 chr18 18219432 18219541 -67769393 - MSTA LTR MaLR -251 113 1 1138 234 4 8 chr18 18219541 18219805 -67769129 - MSTA-int LTR MaLR 0 1651 1069 310 278 101 18 chr18 18219819 18219988 -67768946 - MSTA LTR MaLR -188 240 58 374 263 10 0 chr18 18220033 18220132 -67768802 - MSTA LTR MaLR -328 100 1 375 100 33 0 chr18 18220132 18220192 -67768742 - MSTA-int LTR MaLR 0 1651 1590 346 161 0 32 chr18 18220209 18220271 -67768663 + MSTA LTR MaLR 317 376 -52 237 154 0 0 chr18 18220305 18220344 -67768590 - MSTA-int LTR MaLR -990 661 623 5338 233 52 37 chr18 18220344 18221877 -67767057 - MSTA-int LTR MaLR -68 1583 28 495 229 39 26 chr18 18221872 18222025 -67766909 + THE1-int LTR MaLR 463 617 -963 * 1002 234 80 20 chr18 18222042 18222341 -67766593 - MSTA LTR MaLR -52 376 60 614 235 205 26 chr18 18222342 18222576 -67766358 + THE1-int LTR MaLR 913 1188 -392 273 133 33 50 chr18 18222566 18222626 -67766308 - THE1-int LTR MaLR -612 968 910 * 507 156 21 10 chr18 18222719 18222815 -67766119 - MSTA LTR MaLR -331 97 1 1335 222 3 42 chr18 18222830 18223163 -67765771 - MSTA-int LTR MaLR -14 1637 1318 355 231 0 0 chr18 18223170 18223235 -67765699 - MSTA LTR MaLR -269 159 95 264 239 52 30 chr18 18223246 18223380 -67765554 + C-rich Low_complexity Low_complexity 4 140 0 372 253 10 0 chr18 18223396 18223495 -67765439 - MSTA LTR MaLR -328 100 1 5920 226 50 42 chr18 18223495 18225107 -67763827 - MSTA-int LTR MaLR 0 1651 28 403 194 146 62 chr18 18225104 18225248 -67763686 + THE1-int LTR MaLR 465 661 -990 * 847 234 82 12 chr18 18225290 18225546 -67763388 - MSTA LTR MaLR -60 368 95 788 217 189 20 chr18 18225561 18225805 -67763129 + THE1-int LTR MaLR 907 1191 -389 242 232 18 0 chr18 18225793 18225849 -67763085 - MST-int LTR MaLR -616 1035 979 * 516 168 21 0 chr18 18225932 18226027 -67762907 - MSTA LTR MaLR -331 97 1 1305 225 3 40 chr18 18226027 18226374 -67762560 - MSTA-int LTR MaLR 0 1651 1318 297 266 85 0 chr18 18226381 18226475 -67762459 - MSTA LTR MaLR -269 159 58 447 208 19 38 chr18 18226512 18226618 -67762316 - MSTA LTR MaLR -324 104 1 5611 236 54 38 chr18 18226618 18228210 -67760724 - MSTA-int LTR MaLR 0 1651 34 296 284 37 9 chr18 18228214 18228323 -67760611 + THE1-int LTR MaLR 466 577 -1003 985 196 76 54 chr18 18228365 18228641 -67760293 - MSTA LTR MaLR -52 376 95 576 244 180 56 chr18 18228654 18228904 -67760030 + MST-int LTR MaLR 976 1256 -395 3844 96 27 5 chr18 18229019 18229570 -67759364 + LTR6A LTR ERV1 1 563 -1 440 189 21 0 chr18 18229601 18229696 -67759238 - MSTA LTR MaLR -331 97 1 1268 211 40 46 chr18 18229696 18230023 -67758911 - MSTA-int LTR MaLR 0 1651 1327 318 255 85 11 chr18 18230025 18230119 -67758815 - MSTA LTR MaLR -252 176 76 511 194 10 0 chr18 18230176 18230274 -67758660 - MSTA LTR MaLR -329 99 1 532 198 9 0 chr18 18230274 18230390 -67758544 - MSTA-int LTR MaLR 0 1651 1535 * 4790 243 69 25 chr18 18230386 18231690 -67757244 - MSTA-int LTR MaLR -262 1389 28 496 212 167 8 chr18 18231688 18231820 -67757114 + MST-int LTR MaLR 507 659 -992 * 1035 234 52 7 chr18 18231856 18232125 -67756809 - MSTA LTR MaLR -52 376 96 597 258 189 21 chr18 18232145 18232378 -67756556 + THE1-int LTR MaLR 907 1178 -402 253 245 19 0 chr18 18232376 18232429 -67756505 - THE1-int LTR MaLR -613 967 914 * 320 194 29 2 chr18 18232535 18232609 -67756325 - MSTA LTR MaLR -356 76 3 1213 231 36 33 chr18 18232612 18232945 -67755989 - MSTA-int LTR MaLR -1 1650 1317 293 256 105 0 chr18 18232951 18233037 -67755897 - MSTA LTR MaLR -269 159 65 525 186 21 0 chr18 18233090 18233187 -67755747 - MSTA LTR MaLR -329 99 1 4489 233 76 22 chr18 18233187 18234350 -67754584 - MSTA-int LTR MaLR 0 1651 427 838 205 11 7 chr18 18234348 18234552 -67754382 - MSTA-int LTR MaLR -1269 102 28 * 572 188 156 10 chr18 18234548 18234699 -67754235 + MSTA-int LTR MaLR 466 661 -963 * 274 259 86 9 chr18 18234707 18234823 -67754111 - MSTA LTR MaLR -43 385 261 549 226 226 43 chr18 18234935 18235165 -67753769 - THE1-int LTR MaLR -402 1178 907 931 214 72 51 chr18 18235178 18235454 -67753480 + MSTA LTR MaLR 95 376 -52 293 284 37 9 chr18 18235496 18235605 -67753329 - THE1-int LTR MaLR -1003 577 466 5516 226 56 38 chr18 18235609 18237199 -67751735 + MSTA-int LTR MaLR 34 1651 0 387 242 50 0 chr18 18237199 18237298 -67751636 + MSTA LTR MaLR 1 104 -324 308 226 32 0 chr18 18237374 18237436 -67751498 + MSTA LTR MaLR 96 159 -269 1432 208 3 40 chr18 18237443 18237790 -67751144 + MSTA-int LTR MaLR 1318 1651 0 506 168 21 0 chr18 18237790 18237885 -67751049 + MSTA LTR MaLR 1 97 -331 271 196 18 0 chr18 18237979 18238035 -67750899 + THE1-int LTR MaLR 911 967 -613 * 967 180 189 20 chr18 18238023 18238267 -67750667 - THE1-int LTR MaLR -389 1191 907 876 216 74 16 chr18 18238271 18238538 -67750396 + MSTA LTR MaLR 75 368 -60 392 200 150 36 chr18 18238580 18238720 -67750214 - MST-int LTR MaLR -990 661 506 * 6057 222 51 45 chr18 18238717 18240332 -67748602 + MSTA-int LTR MaLR 28 1651 0 382 222 22 11 chr18 18240337 18240427 -67748507 + MSTA LTR MaLR 9 99 -329 310 230 130 10 chr18 18240476 18240576 -67748358 + MSTA LTR MaLR 60 171 -257 1083 221 92 20 chr18 18240584 18240887 -67748047 + MSTA-int LTR MaLR 1327 1651 0 344 193 102 0 chr18 18240887 18240975 -67747959 + MSTA LTR MaLR 1 97 -331 259 167 155 24 chr18 18241024 18241108 -67747826 + THE1-int LTR MaLR 921 967 -613 * 741 238 189 20 chr18 18241096 18241340 -67747594 - THE1-int LTR MaLR -389 1191 907 481 256 51 26 chr18 18241362 18241542 -67747392 + MSTA LTR MaLR 98 285 -141 313 230 12 6 chr18 18241526 18241632 -67747302 - HSAT5 Satellite Satellite -1 106 1 * 240 263 38 12 chr18 18241706 18241786 -67747148 - HSAT5 Satellite Satellite -2 84 3 323 181 36 48 chr18 18241868 18241951 -67746983 - HSAT5 Satellite Satellite -4 82 1 630 183 0 3 chr18 18242176 18242339 -67746595 - HSAT5 Satellite Satellite 0 162 1 208 260 104 21 chr18 18246447 18246543 -67742391 + MIR SINE MIR 45 148 -60 1127 263 19 3 chr18 18246942 18247254 -67741680 + LTR16C LTR ERVL 146 462 -29 342 322 0 0 chr18 18247377 18247495 -67741439 - MIR SINE MIR -122 140 23 352 339 133 0 chr18 18247639 18247857 -67741077 - MIR SINE MIR -1 261 15 451 235 143 14 chr18 18248146 18248363 -67740571 - LTR33 LTR ERVL 0 521 277 368 315 112 8 chr18 18249243 18249510 -67739424 + L2 LINE L2 2995 3289 -24 1529 183 193 10 chr18 18249552 18249941 -67738993 + LTR46 LTR ERV1 1 460 0 252 293 151 9 chr18 18249952 18250058 -67738876 - MIR SINE MIR -116 146 26 757 287 84 35 chr18 18250524 18250893 -67738041 + MLT1K LTR MaLR 200 586 -2 497 153 276 0 chr18 18251137 18251235 -67737699 - FLAM_C SINE Alu -17 126 2 261 151 0 0 chr18 18251287 18251340 -67737594 + (TG)n Simple_repeat Simple_repeat 1 53 0 216 309 0 24 chr18 18251353 18251437 -67737497 + MIR SINE MIR 161 242 -20 234 91 0 0 chr18 18251623 18251656 -67737278 + (TA)n Simple_repeat Simple_repeat 1 33 0 1289 203 24 40 chr18 18252293 18252589 -67736345 + AluJo SINE Alu 1 291 -21 24 53 0 0 chr18 18252589 18252627 -67736307 + AT_rich Low_complexity Low_complexity 1 38 0 3346 128 18 2 chr18 18254317 18254826 -67734108 - L1PB1 LINE L1 -4 6147 5631 1443 292 37 5 chr18 18255579 18255986 -67732948 - MER70A LTR ERVL -49 423 4 831 130 16 0 chr18 18256632 18256754 -67732180 + MSTB LTR MaLR 1 124 -302 995 152 162 0 chr18 18256754 18256849 -67732085 + MER30 DNA MER1_type 1 79 -151 396 0 0 0 chr18 18256849 18256893 -67732041 + (CA)n Simple_repeat Simple_repeat 2 45 0 995 152 162 0 chr18 18256893 18256995 -67731939 + MER30 DNA MER1_type 79 230 0 * 1440 163 59 42 chr18 18256995 18257300 -67731634 + MSTB LTR MaLR 117 426 0 1323 203 14 28 chr18 18258046 18258332 -67730602 + AluJo SINE Alu 1 282 -30 23 78 0 0 chr18 18259914 18259965 -67728969 + AT_rich Low_complexity Low_complexity 1 51 0 41 36 0 0 chr18 18260532 18260587 -67728347 + AT_rich Low_complexity Low_complexity 1 55 0 181 309 73 31 chr18 18260996 18261187 -67727747 - L2 LINE L2 -667 2647 2449 319 208 15 0 chr18 18262802 18262932 -67726002 + (TG)n Simple_repeat Simple_repeat 2 133 0 627 261 53 0 chr18 18263950 18264137 -67724797 - MER67D LTR ERV1 -114 400 225 26 0 0 0 chr18 18264137 18264163 -67724771 + AT_rich Low_complexity Low_complexity 1 26 0 1910 142 13 13 chr18 18264390 18264701 -67724233 + AluSx SINE Alu 1 311 -1 1926 198 11 6 chr18 18266475 18266838 -67722096 + MLT1A1 LTR MaLR 1 365 0 5099 51 106 125 chr18 18268142 18269051 -67719883 - SVA Other Other -439 947 57 222 37 0 0 chr18 18269051 18269078 -67719856 + (GGGAGA)n Simple_repeat Simple_repeat 1 27 0 821 221 39 0 chr18 18271559 18271740 -67717194 - MER5A DNA MER1_type 0 189 2 1937 139 26 23 chr18 18273453 18273763 -67715171 - AluSx SINE Alu -1 311 1 864 165 125 76 chr18 18273803 18274027 -67714907 - MER46A DNA MER2_type 0 236 2 195 42 0 0 chr18 18275906 18275930 -67713004 + (A)n Simple_repeat Simple_repeat 1 24 0 563 229 33 39 chr18 18279320 18279363 -67709571 - MIR SINE MIR -97 165 123 4328 120 32 32 chr18 18279363 18280054 -67708880 + LTR8 LTR ERV1 1 691 0 563 229 33 39 chr18 18280054 18280163 -67708771 - MIR SINE MIR -139 123 14 1577 79 0 9 chr18 18280600 18280816 -67708118 + L1PA6 LINE L1 5940 6153 -1 365 312 74 16 chr18 18281062 18281290 -67707644 + MIR SINE MIR 22 261 -1 804 216 51 31 chr18 18281378 18281633 -67707301 + LTR37B LTR ERV1 209 468 0 280 248 40 50 chr18 18282000 18282101 -67706833 - MLT2E LTR ERVL -497 131 32 380 282 11 50 chr18 18282360 18282552 -67706382 + MIR SINE MIR 1 146 -62 2259 103 7 0 chr18 18282707 18282997 -67705937 + AluSq SINE Alu 1 292 -21 2298 71 11 0 chr18 18283235 18283543 -67705391 + AluSp SINE Alu 1 311 0 1315 187 45 84 chr18 18283780 18284139 -67704795 + MLT1A1 LTR MaLR 21 365 0 1733 195 0 3 chr18 18284452 18284906 -67704028 - AluJo SINE Alu 0 453 1 2602 147 44 16 chr18 18285076 18285574 -67703360 + L1MB2 LINE L1 5658 6169 -2 29 28 0 0 chr18 18286357 18286393 -67702541 + AT_rich Low_complexity Low_complexity 1 36 0 1162 224 74 59 chr18 18286682 18287096 -67701838 - MLT1C LTR MaLR 0 467 42 1765 185 3 62 chr18 18287096 18287140 -67701794 + MLT1A1 LTR MaLR 5 50 -315 2099 106 42 0 chr18 18287140 18287423 -67701511 - AluSx SINE Alu -17 295 1 1765 185 3 62 chr18 18287423 18287762 -67701172 + MLT1A1 LTR MaLR 50 365 0 1162 224 74 59 chr18 18287762 18287800 -67701134 - MLT1C LTR MaLR -425 42 6 24 53 0 0 chr18 18288075 18288113 -67700821 + AT_rich Low_complexity Low_complexity 1 38 0 311 292 73 10 chr18 18288293 18288389 -67700545 - L2 LINE L2 -20 3252 3151 2189 92 0 0 chr18 18288667 18288981 -67699953 + L1PA7 LINE L1 5846 6159 0 213 408 48 7 chr18 18290228 18290375 -67698559 + MIR SINE MIR 18 170 -92 827 318 68 21 chr18 18290380 18290864 -67698070 - LTR33 LTR ERVL -12 509 3 364 357 4 50 chr18 18291057 18291298 -67697636 + MLT1K LTR MaLR 277 506 -82 450 278 123 62 chr18 18291316 18291722 -67697212 - LTR33A LTR ERVL -92 431 1 2769 6 0 6 chr18 18292000 18292312 -67696622 - AluYa5 SINE Alu -1 310 1 217 329 140 18 chr18 18292683 18292847 -67696087 + MIR3 SINE MIR 16 199 -9 23 0 0 0 chr18 18293292 18293315 -67695619 + AT_rich Low_complexity Low_complexity 1 23 0 959 173 60 5 chr18 18293867 18294052 -67694882 - L1PA16 LINE L1 -9 6157 5963 2190 136 0 0 chr18 18294261 18294555 -67694379 + AluSg SINE Alu 1 294 -16 2153 289 58 40 chr18 18296913 18297581 -67691353 + L2 LINE L2 1745 2430 -884 537 276 74 0 chr18 18297581 18297744 -67691190 - MER96 DNA MER1_type 0 175 1 2153 289 58 40 chr18 18297744 18297847 -67691087 + L2 LINE L2 2430 2530 -784 1468 210 6 3 chr18 18298020 18298339 -67690595 - L1MC2 LINE L1 -1 6343 6024 231 348 45 11 chr18 18298695 18298784 -67690150 + L2 LINE L2 3125 3216 -56 206 32 32 0 chr18 18299530 18299561 -67689373 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 3539 5 0 0 chr18 18299563 18299930 -67689004 - SVA Other Other -20 1366 1000 287 270 17 70 chr18 18300775 18300890 -67688044 - MIR SINE MIR -42 220 112 255 302 88 33 chr18 18301298 18301480 -67687454 - L3 LINE CR1 -170 1407 1216 435 310 5 85 chr18 18302832 18303032 -67685902 + MIR3 SINE MIR 20 203 -5 479 104 0 13 chr18 18303525 18303602 -67685332 + MADE1 DNA Mariner 1 76 -4 405 312 38 38 chr18 18303904 18304090 -67684844 - MER5A DNA MER1_type 0 189 4 244 309 48 68 chr18 18304127 18304334 -67684600 + L2 LINE L2 1255 1457 -1857 593 248 81 6 chr18 18304884 18305045 -67683889 + L1MC4 LINE L1 6689 6861 -1181 392 308 17 6 chr18 18305688 18305860 -67683074 + L1MC4 LINE L1 7724 7897 -145 626 263 135 56 chr18 18306473 18306783 -67682151 + L1ME3A LINE L1 5657 6018 -152 1974 151 7 10 chr18 18306783 18307075 -67681859 + AluSx SINE Alu 1 291 -21 626 263 135 56 chr18 18307075 18307232 -67681702 + L1ME3A LINE L1 6018 6161 -9 209 182 0 0 chr18 18307261 18307294 -67681640 + (CA)n Simple_repeat Simple_repeat 1 33 0 306 297 55 24 chr18 18307399 18307564 -67681370 - HAL1 LINE L1 -1202 1305 1136 2287 100 3 3 chr18 18307698 18307999 -67680935 - AluSc SINE Alu -8 301 1 21 0 0 0 chr18 18308000 18308021 -67680913 + AT_rich Low_complexity Low_complexity 1 21 0 315 327 79 29 chr18 18308126 18308404 -67680530 - MLT1L LTR MaLR -2 613 322 1879 155 3 3 chr18 18309007 18309298 -67679636 - AluSx SINE Alu -21 291 1 21 36 0 0 chr18 18309592 18309620 -67679314 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr18 18310792 18310821 -67678113 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr18 18311200 18311221 -67677713 + AT_rich Low_complexity Low_complexity 1 21 0 212 333 0 0 chr18 18311729 18311777 -67677157 - L2 LINE L2 -15 3257 3210 433 133 0 13 chr18 18311815 18311890 -67677044 + MADE1 DNA Mariner 2 75 -5 456 217 0 0 chr18 18312495 18312578 -67676356 - MER5B DNA MER1_type -4 174 92 816 221 99 6 chr18 18313371 18313543 -67675391 - MER5A DNA MER1_type -1 188 1 1645 225 124 38 chr18 18314723 18315552 -67673382 + LTR1B LTR ERV1 1 826 0 404 248 9 0 chr18 18315808 18315921 -67673013 - LTR43 LTR ERV1 -306 296 183 30 0 0 0 chr18 18316193 18316223 -67672711 + AT_rich Low_complexity Low_complexity 1 30 0 1890 112 8 4 chr18 18316512 18316772 -67672162 - AluSq SINE Alu -7 306 46 1593 184 59 6 chr18 18317151 18317488 -67671446 - MLT1A1 LTR MaLR 0 365 11 2217 119 0 0 chr18 18317606 18317899 -67671035 - AluSg SINE Alu -17 293 1 425 331 6 0 chr18 18318033 18318208 -67670726 + LTR16A1 LTR ERVL 282 457 0 24 0 0 0 chr18 18318230 18318254 -67670680 + AT_rich Low_complexity Low_complexity 1 24 0 885 164 0 0 chr18 18318254 18318382 -67670552 - FLAM_C SINE Alu -15 128 1 258 365 0 7 chr18 18318965 18319102 -67669832 - HERV16 LTR ERVL -4335 661 526 2129 89 7 0 chr18 18319159 18319470 -67669464 - AluSp SINE Alu 0 323 11 1469 194 153 22 chr18 18319738 18320151 -67668783 - MLT1C LTR MaLR 0 467 1 499 253 161 8 chr18 18320335 18320584 -67668350 - LTR16A1 LTR ERVL -3 454 168 240 235 20 0 chr18 18321574 18321625 -67667309 - MIR SINE MIR -76 132 81 21 0 0 0 chr18 18321625 18321646 -67667288 + AT_rich Low_complexity Low_complexity 1 21 0 623 76 0 0 chr18 18373942 18374021 -67614913 + AluSg/x SINE Alu 218 296 -13 1437 224 13 7 chr18 18374057 18374361 -67614573 - AluJo SINE Alu -6 306 1 783 201 0 7 chr18 18374363 18374502 -67614432 - AluJo SINE Alu -174 138 1 731 214 31 6 chr18 18374634 18374793 -67614141 - FRAM SINE Alu -13 163 1 26 0 0 0 chr18 18374998 18375024 -67613910 + AT_rich Low_complexity Low_complexity 1 26 0 4104 232 37 28 chr18 18376012 18376236 -67612698 - L1P LINE L1 -1033 5113 4893 2083 128 10 0 chr18 18376236 18376534 -67612400 - AluSq SINE Alu -9 304 4 4104 232 37 28 chr18 18376534 18376607 -67612327 - L1P LINE L1 -1253 4893 4822 7471 26 8 14 chr18 18376607 18377746 -67611188 - L1PA3 LINE L1 0 6155 5043 4104 232 37 28 chr18 18377746 18378602 -67610332 - L1P LINE L1 -1324 4822 3948 468 113 0 14 chr18 18378604 18378675 -67610259 - L1P LINE L1 -2325 3821 3752 209 184 0 26 chr18 18378680 18378756 -67610178 + (TATATG)n Simple_repeat Simple_repeat 5 78 0 506 111 0 74 chr18 18378767 18378957 -67609977 + (TATATG)n Simple_repeat Simple_repeat 5 180 0 242 220 0 0 chr18 18378958 18379017 -67609917 + (TA)n Simple_repeat Simple_repeat 2 60 0 1755 225 72 51 chr18 18379248 18379419 -67609515 + L1MB7 LINE L1 5222 5388 -790 1616 164 3 35 chr18 18379419 18379706 -67609228 + AluJb SINE Alu 22 299 -13 1755 225 72 51 chr18 18379706 18380226 -67608708 + L1MB7 LINE L1 5388 5926 -252 431 219 0 93 chr18 18380241 18380392 -67608542 + L1MB7 LINE L1 6039 6175 -9 1460 223 24 14 chr18 18382261 18382552 -67606382 + AluJo SINE Alu 1 294 -8 957 209 138 18 chr18 18382672 18382954 -67605980 + MER33 DNA MER1_type 8 323 -1 417 250 56 9 chr18 18383596 18383704 -67605230 - Tigger1 DNA MER2_type 0 2418 2306 391 213 25 0 chr18 18383701 18383781 -67605153 - Tigger1 DNA MER2_type -370 2048 1967 * 10938 139 26 30 chr18 18383881 18384105 -67604829 - Tigger1 DNA MER2_type -449 1969 1746 2240 109 13 0 chr18 18384105 18384408 -67604526 - AluSp SINE Alu -6 307 1 10938 139 26 30 chr18 18384408 18384691 -67604243 - Tigger1 DNA MER2_type -672 1746 1463 2104 117 3 0 chr18 18384691 18384981 -67603953 - AluSg SINE Alu -19 291 1 10938 139 26 30 chr18 18384981 18385015 -67603919 - Tigger1 DNA MER2_type -955 1463 1430 1261 209 13 40 chr18 18385015 18385316 -67603618 + AluJb SINE Alu 1 293 -19 10938 139 26 30 chr18 18385316 18386724 -67602210 - Tigger1 DNA MER2_type -988 1430 26 1794 152 24 17 chr18 18387303 18387592 -67601342 + AluSx SINE Alu 1 291 -21 1818 142 7 40 chr18 18387936 18388062 -67600872 + AluSg SINE Alu 3 132 -178 186 43 0 0 chr18 18388062 18388085 -67600849 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1818 142 7 40 chr18 18388085 18388260 -67600674 + AluSg SINE Alu 132 294 -16 270 279 76 38 chr18 18388771 18388929 -67600005 - L1ME LINE L1 -313 5808 5645 4561 152 24 57 chr18 18389259 18389601 -67599333 - L1MA5A LINE L1 -5 6292 5940 2220 99 10 10 chr18 18389601 18389913 -67599021 - AluSx SINE Alu 0 312 1 4561 152 24 57 chr18 18389913 18390367 -67598567 - L1MA5A LINE L1 -357 5940 5529 2308 77 0 0 chr18 18390367 18390653 -67598281 + AluY SINE Alu 13 298 -13 4561 152 24 57 chr18 18390653 18390790 -67598144 - L1MA5A LINE L1 -768 5529 5389 390 162 63 54 chr18 18390790 18390901 -67598033 + Charlie4 DNA MER1_type 1825 1936 -25 255 31 0 0 chr18 18390916 18390948 -67597986 + (CA)n Simple_repeat Simple_repeat 1 32 0 333 310 35 17 chr18 18390971 18391087 -67597847 + MIR SINE MIR 16 133 -129 229 301 25 84 chr18 18391097 18391300 -67597634 + Charlie8 DNA MER1_type 1 191 -2226 332 360 138 25 chr18 18391892 18392248 -67596686 - L2 LINE L2 -8 3264 2869 287 333 39 114 chr18 18393155 18393612 -67595322 + L2 LINE L2 2844 3266 -6 189 388 27 14 chr18 18393762 18393909 -67595025 - L2 LINE L2 -336 2977 2829 344 333 92 11 chr18 18393958 18394231 -67594703 + L1MC4a LINE L1 5596 5890 -1918 27 0 0 0 chr18 18394331 18394358 -67594576 + AT_rich Low_complexity Low_complexity 1 27 0 795 114 0 0 chr18 18394887 18395001 -67593933 + L1PA16 LINE L1 6044 6157 -9 2220 119 44 3 chr18 18395005 18395365 -67593569 - L1MA4 LINE L1 -26 6274 5900 3618 164 11 18 chr18 18395437 18396094 -67592840 + L1MA4 LINE L1 5490 6141 -159 192 182 0 0 chr18 18396127 18396171 -67592763 + (TA)n Simple_repeat Simple_repeat 1 44 0 614 209 18 18 chr18 18396211 18396374 -67592560 + L1ME3A LINE L1 4539 4701 -1445 2490 160 0 14 chr18 18396496 18396940 -67591994 + L1PA15 LINE L1 5723 6160 -5 1515 266 76 46 chr18 18397142 18398130 -67590804 + L1ME3A LINE L1 4967 5987 -183 1500 259 55 28 chr18 18398253 18398725 -67590209 + MLT1D LTR MaLR 21 505 0 244 200 29 57 chr18 18398738 18398808 -67590126 + L1ME3A LINE L1 6098 6165 -5 232 390 10 0 chr18 18398858 18398958 -67589976 - L2 LINE L2 -9 3304 3204 2083 300 18 30 chr18 18399507 18400214 -67588720 + L1M2 LINE L1 402 1100 -6466 7909 208 83 24 chr18 18400408 18403186 -67585748 + L1M2 LINE L1 2804 5752 -1813 740 72 0 27 chr18 18403186 18403297 -67585637 - L1PA13 LINE L1 -2 6161 6054 1156 163 41 0 chr18 18403303 18403524 -67585410 + L1MA6 LINE L1 6071 6300 0 298 272 68 25 chr18 18403542 18403704 -67585230 + MLT1J2 LTR MaLR 280 448 -2 227 270 67 22 chr18 18404150 18404239 -67584695 - L2 LINE L2 -940 2374 2282 568 294 136 27 chr18 18404524 18404854 -67584080 - LTR33 LTR ERVL -123 398 33 246 277 0 12 chr18 18405718 18405801 -67583133 - MLT1H LTR MaLR 0 549 468 254 270 40 0 chr18 18405993 18406067 -67582867 - MER63 DNA MER1_type -9 1052 976 598 194 8 47 chr18 18406067 18406196 -67582738 - MER63 DNA MER1_type -312 750 1 544 196 45 8 chr18 18406350 18406483 -67582451 + L1MD2 LINE L1 5797 5934 -425 371 306 61 68 chr18 18406561 18406839 -67582095 - L2 LINE L2 0 3313 3038 469 198 12 0 chr18 18407112 18407193 -67581741 + MER2 DNA MER2_type 6 87 -258 235 235 141 0 chr18 18407363 18407448 -67581486 + L1ME LINE L1 5556 5652 -469 372 43 0 0 chr18 18407489 18407535 -67581399 + (TA)n Simple_repeat Simple_repeat 2 47 0 26 0 0 0 chr18 18407668 18407694 -67581240 + AT_rich Low_complexity Low_complexity 1 26 0 354 290 41 76 chr18 18407732 18408046 -67580888 + L1M4 LINE L1 3613 3915 -2231 2567 159 20 56 chr18 18408381 18408933 -67580001 - L1PA16 LINE L1 0 6166 5635 555 241 25 12 chr18 18408969 18409131 -67579803 + L1MB7 LINE L1 2 165 -6377 416 213 89 35 chr18 18409145 18409314 -67579620 + L1MB7 LINE L1 1984 2161 -4485 536 237 5 39 chr18 18409343 18409550 -67579384 + L1MB7 LINE L1 2281 2480 -4166 2586 225 40 28 chr18 18409566 18409900 -67579034 + L1MB7 LINE L1 2534 2863 -3781 348 83 0 0 chr18 18409900 18409948 -67578986 + (TA)n Simple_repeat Simple_repeat 1 48 0 1990 25 14 79 chr18 18409948 18410228 -67578706 - L1PA4 LINE L1 -16 6139 5878 2586 225 40 28 chr18 18410228 18410816 -67578118 + L1MB7 LINE L1 2862 3465 -3179 * 3620 202 43 24 chr18 18410811 18411906 -67577028 + L1MB7 LINE L1 5543 6656 -26 279 0 0 0 chr18 18412271 18412302 -67576632 + (CAA)n Simple_repeat Simple_repeat 3 33 0 2249 97 3 10 chr18 18412503 18412791 -67576143 + AluSp SINE Alu 4 291 -58 608 13 26 0 chr18 18412791 18412867 -67576067 + (CATAA)n Simple_repeat Simple_repeat 2 79 0 2249 97 3 10 chr18 18412867 18412926 -67576008 + AluSp SINE Alu 291 349 0 22 0 0 0 chr18 18413027 18413049 -67575885 + AT_rich Low_complexity Low_complexity 1 22 0 421 284 200 13 chr18 18413271 18413722 -67575212 + L1MEc LINE L1 944 1369 -4846 551 286 12 24 chr18 18413892 18414144 -67574790 + L1MEc LINE L1 2312 2560 -3655 1498 211 31 29 chr18 18414167 18414580 -67574354 + L1MC3 LINE L1 5650 6063 -1722 202 91 45 23 chr18 18415323 18415367 -67573567 + (CAGAGA)n Simple_repeat Simple_repeat 1 45 0 23 33 0 0 chr18 18415518 18415548 -67573386 + AT_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr18 18415746 18415771 -67573163 + AT_rich Low_complexity Low_complexity 1 25 0 621 155 0 70 chr18 18415771 18415900 -67573034 - L1PB3 LINE L1 0 6154 6035 23 0 0 0 chr18 18416105 18416128 -67572806 + AT_rich Low_complexity Low_complexity 1 23 0 238 261 46 0 chr18 18417616 18417681 -67571253 + L2 LINE L2 3204 3271 -1 1576 169 52 43 chr18 18418298 18418624 -67570310 + MER44D DNA MER2_type 5 603 -6 923 242 85 7 chr18 18419465 18419758 -67569176 - L1ME3A LINE L1 -1 6169 5854 450 291 58 4 chr18 18421516 18421777 -67567157 + L1MEc LINE L1 2959 3233 -2982 267 297 88 28 chr18 18421900 18422220 -67566714 - L1M4 LINE L1 -3267 2879 2541 * 5298 170 30 16 chr18 18422219 18422540 -67566394 - L1PB2 LINE L1 -4 6147 5832 267 31 0 0 chr18 18422540 18422572 -67566362 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 2057 134 0 0 chr18 18422575 18422858 -67566076 - AluSq SINE Alu -30 283 1 5298 170 30 16 chr18 18422858 18424225 -67564709 - L1PB2 LINE L1 -320 5831 4430 638 151 32 21 chr18 18424244 18424570 -67564364 + (TA)n Simple_repeat Simple_repeat 1 329 0 586 110 33 44 chr18 18424578 18424760 -67564174 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 * 590 153 34 23 chr18 18424723 18424900 -67564034 + (TA)n Simple_repeat Simple_repeat 2 180 0 463 167 9 44 chr18 18424915 18425029 -67563905 + (CATATA)n Simple_repeat Simple_repeat 5 114 0 659 144 35 12 chr18 18425029 18425202 -67563732 + (TATATG)n Simple_repeat Simple_repeat 3 179 0 2413 204 61 5 chr18 18425202 18425775 -67563159 - L1PB2 LINE L1 -1747 4399 3795 382 293 45 0 chr18 18425771 18425928 -67563006 - L1M4 LINE L1 -3597 2549 2386 * 5963 111 16 2 chr18 18425931 18426962 -67561972 + L1PA12 LINE L1 5132 6166 -2 258 314 0 23 chr18 18427052 18427138 -67561796 - L2 LINE L2 -1 3271 3188 207 0 0 0 chr18 18427159 18427182 -67561752 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 441 36 0 0 chr18 18427181 18427236 -67561698 + (TA)n Simple_repeat Simple_repeat 1 55 0 765 210 43 86 chr18 18427291 18427663 -67561271 + L1M1 LINE L1 3142 3497 -4068 3443 206 70 37 chr18 18427698 18428891 -67560043 + L1M1 LINE L1 3460 4700 -2865 1548 164 14 11 chr18 18428902 18429177 -67559757 + AluSx SINE Alu 1 276 -36 662 194 58 26 chr18 18429177 18429358 -67559576 - LOR1-int LTR ERV1 -6092 2028 1839 * 1442 184 22 4 chr18 18429357 18429628 -67559306 - LOR1-int LTR ERV1 -3592 2354 2079 398 250 0 24 chr18 18430863 18430987 -67557947 + GA-rich Low_complexity Low_complexity 3 123 0 436 242 75 82 chr18 18432131 18432596 -67556338 - HSREP522 Satellite telomeric -103 461 1 350 296 30 12 chr18 18433964 18434133 -67554801 + GA-rich Low_complexity Low_complexity 2 173 0 4636 200 37 62 chr18 18434709 18435432 -67553502 - L1 LINE L1 -814 6751 6078 2071 125 0 0 chr18 18435432 18435727 -67553207 - AluSg SINE Alu -15 295 1 4636 200 37 62 chr18 18435727 18436385 -67552549 - L1 LINE L1 -1487 6078 5405 1029 246 41 41 chr18 18436368 18436596 -67552338 - L1 LINE L1 -5176 2389 2159 * 1736 189 0 10 chr18 18436596 18436909 -67552025 - AluSx SINE Alu 0 312 3 1029 246 41 41 chr18 18436909 18437074 -67551860 - L1 LINE L1 -5405 2160 1996 414 0 0 0 chr18 18437409 18437455 -67551479 + (TG)n Simple_repeat Simple_repeat 2 47 0 1876 73 0 11 chr18 18437732 18437993 -67550941 - AluY SINE Alu 0 311 54 2357 92 3 0 chr18 18438531 18438835 -67550099 - AluY SINE Alu -6 305 1 846 212 23 9 chr18 18438845 18439062 -67549872 - L1MC3 LINE L1 0 7785 7566 607 261 59 25 chr18 18439187 18439390 -67549544 + MIR SINE MIR 53 262 0 359 108 231 0 chr18 18440795 18440860 -67548074 - MADE1 DNA Mariner 0 80 1 2255 114 0 16 chr18 18442967 18443284 -67545650 - AluSx SINE Alu 0 312 1 219 36 0 0 chr18 18443462 18443490 -67545444 + (TG)n Simple_repeat Simple_repeat 1 28 0 924 98 5 152 chr18 18444654 18444838 -67544096 + AluY SINE Alu 1 157 -154 769 277 93 30 chr18 18444838 18445235 -67543699 + L1M4 LINE L1 3903 4324 -1822 2267 67 6 61 chr18 18445411 18445740 -67543194 - AluY SINE Alu 0 311 1 1029 99 0 25 chr18 18445740 18445902 -67543032 - L1P4 LINE L1 -671 5490 5333 3083 126 11 6 chr18 18446416 18446886 -67542048 - MER84 LTR ERVI 0 507 36 233 374 0 18 chr18 18446907 18447078 -67541856 + CT-rich Low_complexity Low_complexity 3 170 0 36 77 0 0 chr18 18447214 18447292 -67541642 + AT_rich Low_complexity Low_complexity 1 78 0 887 216 38 14 chr18 18447532 18447745 -67541189 - MER96B DNA MER1_type? -23 394 177 274 175 23 5 chr18 18447740 18447751 -67541183 - MLT1D LTR MaLR -398 107 98 * 12830 88 8 5 chr18 18447751 18450355 -67538579 - L1PA7 LINE L1 -3 6151 3542 274 175 23 5 chr18 18450355 18450426 -67538508 - MLT1D LTR MaLR -407 98 57 2511 172 31 8 chr18 18450562 18451438 -67537496 + L1MA4A LINE L1 4853 5747 -556 1375 173 75 19 chr18 18451794 18452219 -67536715 + L1MA4A LINE L1 5771 6280 -23 231 206 41 0 chr18 18452576 18452649 -67536285 + (TTATA)n Simple_repeat Simple_repeat 4 79 0 207 262 47 13 chr18 18452581 18452730 -67536204 + (TTTAA)n Simple_repeat Simple_repeat 2 155 0 * 313 226 32 21 chr18 18452880 18452973 -67535961 - L1ME1 LINE L1 -59 6107 6014 1502 173 121 0 chr18 18453153 18453459 -67535475 - MER2 DNA MER2_type 0 344 2 2217 119 0 0 chr18 18454858 18455152 -67533782 - AluSg SINE Alu -16 294 1 2041 107 3 52 chr18 18455287 18455595 -67533339 - AluSx SINE Alu -19 293 1 23 33 0 0 chr18 18455724 18455754 -67533180 + AT_rich Low_complexity Low_complexity 1 30 0 1517 164 4 39 chr18 18456272 18456552 -67532382 - AluSx SINE Alu -12 300 31 410 263 0 0 chr18 18456739 18456815 -67532119 + MER2 DNA MER2_type 270 345 0 241 336 109 8 chr18 18457022 18457150 -67531784 - L2 LINE L2 -817 2497 2357 23 0 0 0 chr18 18457964 18457987 -67530947 + AT_rich Low_complexity Low_complexity 1 23 0 611 182 0 0 chr18 18458340 18458439 -67530495 + AluJb SINE Alu 184 282 -30 31 26 0 0 chr18 18458439 18458477 -67530457 + AT_rich Low_complexity Low_complexity 1 38 0 186 214 89 0 chr18 18458637 18458693 -67530241 + MIR SINE MIR 137 197 -65 1243 239 21 3 chr18 18459384 18459673 -67529261 - AluJo SINE Alu -14 298 5 429 147 31 124 chr18 18459679 18459808 -67529126 - MLT1D LTR MaLR -297 208 92 1455 166 3 83 chr18 18460016 18460342 -67528592 - AluJb SINE Alu -10 302 3 1657 92 110 26 chr18 18460359 18460632 -67528302 - L1PA13 LINE L1 -7 6156 5861 728 256 0 0 chr18 18461029 18461185 -67527749 + MER6B DNA MER2_type 1 156 -54 314 348 127 25 chr18 18461953 18462111 -67526823 + L2 LINE L2 224 397 -2917 356 300 148 29 chr18 18462493 18462939 -67525995 + L1M4 LINE L1 4177 4675 -1471 22 80 0 0 chr18 18463502 18463552 -67525382 + AT_rich Low_complexity Low_complexity 1 50 0 23 0 0 0 chr18 18464159 18464182 -67524752 + AT_rich Low_complexity Low_complexity 1 23 0 188 306 118 12 chr18 18466775 18466860 -67522074 + MIR SINE MIR 48 141 -67 17509 37 5 1 chr18 18467489 18469648 -67519286 - L1P LINE L1 -1048 5098 2932 6883 22 16 0 chr18 18469649 18470564 -67518370 + L1PA3 LINE L1 5141 6071 -84 227 333 13 0 chr18 18470783 18470858 -67518076 - L2 LINE L2 -9 3304 3229 388 340 61 20 chr18 18470923 18471120 -67517814 + MIR SINE MIR 57 261 -1 212 325 57 24 chr18 18472167 18472290 -67516644 + L2 LINE L2 2464 2590 -724 6134 168 3 0 chr18 18472312 18473382 -67515552 - L1P LINE L1 -1209 4937 3865 282 195 103 23 chr18 18473386 18473473 -67515461 + Charlie4a DNA MER1_type 246 339 -169 235 331 123 6 chr18 18474769 18474932 -67514002 - MIR SINE MIR -37 225 44 2316 60 6 0 chr18 18475201 18475516 -67513418 + Harlequin LTR ERV1 2261 2577 -4319 * 12739 207 36 59 chr18 18475492 18478514 -67510420 + Harlequin LTR ERV1 3695 6648 -1 2739 149 50 28 chr18 18478561 18479096 -67509838 + LTR10A LTR ERV1 1 547 -62 923 230 14 19 chr18 18479187 18479400 -67509534 - MER58C DNA MER1_type 0 215 4 364 252 54 23 chr18 18479511 18479708 -67509226 - L1ME2 LINE L1 -126 6040 5843 3816 105 20 2 chr18 18479712 18480254 -67508680 - MER41A LTR ERV1 -2 552 1 3601 113 6 2 chr18 18480254 18480757 -67508177 - MER41A-int LTR ERV1 -3 5943 5439 483 262 67 20 chr18 18480757 18480906 -67508028 - MER31B LTR ERV1 -226 240 85 2148 234 54 6 chr18 18480923 18481604 -67507330 + L1M4 LINE L1 2314 3027 -3119 5309 228 19 13 chr18 18482941 18484400 -67504534 + L1PBb LINE L1 777 2333 -3870 455 136 0 0 chr18 18484401 18484467 -67504467 - AluS SINE Alu -246 66 1 231 88 0 0 chr18 18484785 18484819 -67504115 + (TATG)n Simple_repeat Simple_repeat 2 35 0 1989 138 0 0 chr18 18484819 18485101 -67503833 - AluSx SINE Alu -28 284 3 748 176 24 6 chr18 18485205 18485375 -67503559 - L1MB2 LINE L1 -1 6170 5998 30 45 0 0 chr18 18485565 18485609 -67503325 + AT_rich Low_complexity Low_complexity 1 44 0 29 60 0 0 chr18 18487081 18487131 -67501803 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr18 18492814 18492835 -67496099 + AT_rich Low_complexity Low_complexity 1 21 0 1569 211 3 10 chr18 18493072 18493375 -67495559 - AluSx SINE Alu -11 301 1 2008 142 3 0 chr18 18494552 18494855 -67494079 + AluSx SINE Alu 1 304 -8 2398 280 60 12 chr18 18494902 18496179 -67492755 + L1M4 LINE L1 3174 4511 -1635 1591 283 70 75 chr18 18496177 18497618 -67491316 + L1 LINE L1 17 2166 -5399 * 2139 143 0 0 chr18 18497618 18497918 -67491016 + AluSx SINE Alu 3 302 -10 1591 283 70 75 chr18 18497918 18498141 -67490793 + L1 LINE L1 2166 2389 -5176 * 4282 198 38 62 chr18 18498124 18498781 -67490153 + L1 LINE L1 5405 6076 -1489 2144 124 0 0 chr18 18498781 18499079 -67489855 + AluSg SINE Alu 1 298 -12 4282 198 38 62 chr18 18499079 18499800 -67489134 + L1 LINE L1 6076 6751 -814 398 238 66 27 chr18 18501863 18502145 -67486789 + HSREP522 Satellite telomeric 1 292 -339 387 250 0 24 chr18 18503324 18503448 -67485486 + CT-rich Low_complexity Low_complexity 3 123 0 300 283 43 29 chr18 18503935 18504073 -67484861 - L1MEc LINE L1 -2806 4759 4620 1330 186 22 4 chr18 18504686 18504955 -67483979 + LOR1-int LTR ERV1 2081 2354 -3592 689 185 36 21 chr18 18504954 18505139 -67483795 + LOR1-int LTR ERV1 1839 2020 -3566 * 1634 157 15 7 chr18 18505139 18505413 -67483521 - AluSx SINE Alu -36 276 1 3282 193 59 90 chr18 18505424 18507027 -67481907 - L1MEc LINE L1 -2865 4700 3142 276 77 0 0 chr18 18507082 18507121 -67481813 + (TA)n Simple_repeat Simple_repeat 1 39 0 247 326 0 23 chr18 18507152 18507238 -67481696 + L2 LINE L2 3188 3271 -1 5850 113 16 24 chr18 18507326 18508464 -67480470 - L1PA12 LINE L1 0 6168 5026 2739 179 5 4 chr18 18508466 18509018 -67479916 + L1PA12 LINE L1 4463 5015 -1131 414 291 17 23 chr18 18509154 18509326 -67479608 - L1MEc LINE L1 -6170 1576 1406 455 290 39 0 chr18 18509370 18509577 -67479357 + L1M4 LINE L1 2335 2549 -3597 * 2241 208 56 5 chr18 18509573 18510149 -67478785 + L1PB2 LINE L1 3795 4399 -1747 594 173 29 6 chr18 18510149 18510322 -67478612 + (CATATA)n Simple_repeat Simple_repeat 3 179 0 182 220 17 0 chr18 18510335 18510394 -67478540 + (TA)n Simple_repeat Simple_repeat 2 61 0 738 150 52 0 chr18 18510417 18510671 -67478263 + (TA)n Simple_repeat Simple_repeat 1 267 0 604 138 63 6 chr18 18510671 18511007 -67477927 + (CATATA)n Simple_repeat Simple_repeat 1 355 0 586 173 40 6 chr18 18510987 18511160 -67477774 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 5115 165 34 19 chr18 18511183 18512549 -67476385 + L1PB2 LINE L1 4430 5774 -377 2067 138 0 0 chr18 18512549 18512832 -67476102 + AluSq SINE Alu 1 283 -30 267 31 0 0 chr18 18512835 18512867 -67476067 + (GAAAA)n Simple_repeat Simple_repeat 2 33 0 5115 165 34 19 chr18 18512867 18513188 -67475746 + L1PB2 LINE L1 5775 6147 -4 229 291 67 25 chr18 18513225 18513507 -67475427 + L1M4 LINE L1 2586 2879 -3267 392 294 53 4 chr18 18513634 18513896 -67475038 - L1M4 LINE L1 -2982 3164 2890 332 217 75 0 chr18 18513948 18514068 -67474866 + L1MC4 LINE L1 7914 8042 0 2338 110 0 0 chr18 18514537 18514846 -67474088 + AluSg1 SINE Alu 1 309 0 2073 131 7 3 chr18 18515139 18515444 -67473490 - AluSx SINE Alu -6 306 1 2211 91 30 0 chr18 18515752 18516049 -67472885 - AluY SINE Alu -5 306 1 22 0 0 0 chr18 18516768 18516790 -67472144 + AT_rich Low_complexity Low_complexity 1 22 0 3681 112 14 12 chr18 18517932 18518495 -67470439 - LTR6A LTR ERV1 0 564 1 543 256 222 0 chr18 18518832 18519012 -67469922 + MER58A DNA MER1_type 1 220 -4 197 321 161 0 chr18 18519504 18519585 -67469349 - MIR SINE MIR -51 211 118 25 65 0 0 chr18 18521109 18521155 -67467779 + AT_rich Low_complexity Low_complexity 1 46 0 24 67 0 0 chr18 18521343 18521388 -67467546 + AT_rich Low_complexity Low_complexity 1 45 0 23 54 0 0 chr18 18522747 18522784 -67466150 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr18 18523142 18523170 -67465764 + AT_rich Low_complexity Low_complexity 1 28 0 501 371 25 0 chr18 18523369 18523606 -67465328 + LTR16A LTR ERVL 196 438 -12 220 284 99 62 chr18 18524143 18524226 -67464708 - MIR SINE MIR -66 196 118 2391 172 24 0 chr18 18524226 18524644 -67464290 + MSTA LTR MaLR 1 428 0 220 284 99 62 chr18 18524644 18524722 -67464212 - MIR SINE MIR -144 118 29 242 143 20 0 chr18 18524835 18524884 -67464050 + GA-rich Low_complexity Low_complexity 2 51 0 324 64 0 0 chr18 18525045 18525092 -67463842 + (TG)n Simple_repeat Simple_repeat 2 48 0 182 203 0 47 chr18 18525151 18525215 -67463719 + CT-rich Low_complexity Low_complexity 2 62 0 2102 143 0 0 chr18 18526183 18526483 -67462451 - AluSc SINE Alu -9 300 1 2341 87 0 3 chr18 18526518 18526817 -67462117 - AluY SINE Alu -13 298 1 587 140 53 0 chr18 18526818 18526932 -67462002 - L1MB4 LINE L1 -241 5939 5820 522 0 0 0 chr18 18526944 18527002 -67461932 + (TA)n Simple_repeat Simple_repeat 2 59 0 698 215 0 0 chr18 18527002 18527123 -67461811 - FLAM_C SINE Alu -22 121 1 1479 207 35 3 chr18 18527125 18527463 -67461471 - L1MB4 LINE L1 -355 5828 5480 2088 130 0 10 chr18 18528039 18528340 -67460594 - AluSg SINE Alu -12 298 1 854 242 80 36 chr18 18528631 18528905 -67460029 - MER21B LTR ERV1 -83 848 490 1638 187 3 23 chr18 18528905 18529205 -67459729 - AluJo SINE Alu -13 299 6 854 242 80 36 chr18 18529205 18529273 -67459661 - MER21B LTR ERV1 -441 490 426 1084 191 0 22 chr18 18529276 18529454 -67459480 + AluJb SINE Alu 2 175 -137 1676 176 0 23 chr18 18529709 18530011 -67458923 - AluJo SINE Alu -7 305 11 2216 126 3 3 chr18 18530026 18530335 -67458599 - AluSx SINE Alu -3 309 1 2041 213 38 58 chr18 18530337 18530402 -67458532 - L1MB8 LINE L1 -3 6175 6110 1531 222 0 0 chr18 18530402 18530708 -67458226 + AluJb SINE Alu 1 306 -6 2041 213 38 58 chr18 18530708 18531276 -67457658 - L1MB8 LINE L1 -68 6110 5555 614 208 0 54 chr18 18531276 18531425 -67457509 + FLAM_A SINE Alu 1 141 -1 395 206 0 0 chr18 18531428 18531501 -67457433 - L1MB8 LINE L1 -613 5571 5499 1648 197 3 10 chr18 18531502 18531801 -67457133 - AluJb SINE Alu -15 297 1 182 91 30 0 chr18 18532021 18532054 -67456880 + T-rich Low_complexity Low_complexity 3 36 0 476 138 11 0 chr18 18532072 18532166 -67456768 - L1PB1 LINE L1 -1 6150 6056 32 26 0 0 chr18 18532172 18532211 -67456723 + AT_rich Low_complexity Low_complexity 1 39 0 1984 155 14 0 chr18 18532470 18532785 -67456149 - AluSx SINE Alu 0 312 1 2285 104 0 7 chr18 18533056 18533354 -67455580 + AluSc SINE Alu 1 296 -13 957 133 128 24 chr18 18533899 18534110 -67454824 - MER6 DNA MER2_type 0 865 633 1444 148 124 16 chr18 18534110 18534401 -67454533 + AluSx SINE Alu 1 319 0 1803 119 4 32 chr18 18534611 18534888 -67454046 - AluSx SINE Alu -7 305 37 1158 287 79 13 chr18 18534950 18535695 -67453239 - L1M4 LINE L1 -1856 4290 3497 30 0 0 0 chr18 18535730 18535760 -67453174 + AT_rich Low_complexity Low_complexity 1 30 0 357 43 0 0 chr18 18536226 18536273 -67452661 + (CA)n Simple_repeat Simple_repeat 2 48 0 2576 224 43 73 chr18 18536661 18536824 -67452110 + L1MA9 LINE L1 4255 4421 -1725 250 128 0 0 chr18 18536824 18536863 -67452071 - MADE1 DNA Mariner -41 39 1 2576 224 43 73 chr18 18536863 18537007 -67451927 + L1MA9 LINE L1 4421 4568 -1578 2262 121 0 0 chr18 18537007 18537314 -67451620 + AluSc SINE Alu 1 307 -2 2576 224 43 73 chr18 18537314 18538056 -67450878 + L1MA9 LINE L1 4568 5310 -836 1390 208 12 6 chr18 18538116 18538443 -67450491 + L1MA9 LINE L1 5399 5727 -585 1917 127 7 0 chr18 18538444 18538719 -67450215 + AluSg SINE Alu 1 277 -33 714 261 68 0 chr18 18538719 18538880 -67450054 + AluJo SINE Alu 87 258 -54 1870 190 72 16 chr18 18538902 18538929 -67450005 + L1MA9 LINE L1 5766 5790 -522 303 28 0 0 chr18 18538929 18538965 -67449969 + (TG)n Simple_repeat Simple_repeat 1 36 0 1870 190 72 16 chr18 18538965 18539436 -67449498 + L1MA9 LINE L1 5790 6292 -20 1985 114 52 0 chr18 18539709 18539998 -67448936 + AluSg SINE Alu 1 304 -6 183 80 0 0 chr18 18540795 18540820 -67448114 + (A)n Simple_repeat Simple_repeat 1 25 0 2271 100 0 0 chr18 18541183 18541483 -67447451 - AluY SINE Alu -11 300 1 427 236 16 16 chr18 18542223 18542346 -67446588 - L1MCa LINE L1 -5731 695 573 1482 259 34 11 chr18 18542418 18542862 -67446072 - L1MCa LINE L1 -5834 592 139 1898 138 0 64 chr18 18542862 18542979 -67445955 - AluSx SINE Alu -6 306 183 7623 26 0 18 chr18 18542979 18544681 -67444253 - L1PA3 LINE L1 0 6155 4471 1898 138 0 64 chr18 18544681 18544890 -67444044 - AluSx SINE Alu -129 183 1 2326 167 47 2 chr18 18544895 18545385 -67443549 - L1MA6 LINE L1 0 6300 5789 290 211 27 19 chr18 18545483 18545584 -67443350 - L1MA6 LINE L1 -498 5802 5705 9788 247 43 55 chr18 18545628 18546443 -67442491 - L1P4 LINE L1 -444 7159 6336 2170 105 10 0 chr18 18546443 18546738 -67442196 - AluSq SINE Alu -12 301 4 9788 247 43 55 chr18 18546738 18546811 -67442123 - L1P4 LINE L1 -1267 6336 6264 7566 26 0 8 chr18 18546811 18547950 -67440984 - L1PA3 LINE L1 0 6155 5043 9788 247 43 55 chr18 18547950 18549197 -67439737 - L1P4 LINE L1 -1339 6264 5004 2097 135 0 3 chr18 18549197 18549494 -67439440 - AluSq SINE Alu -17 296 1 9788 247 43 55 chr18 18549494 18550105 -67438829 - L1P4 LINE L1 -2599 5004 4388 1964 149 24 0 chr18 18550105 18550401 -67438533 + AluSx SINE Alu 3 305 -7 9788 247 43 55 chr18 18550401 18553906 -67435028 - L1P4 LINE L1 -3215 4388 116 274 178 0 6 chr18 18553921 18553987 -67434947 - L1PB4 LINE L1 -13 6143 6091 752 171 0 0 chr18 18554030 18554147 -67434787 - FLAM_C SINE Alu -16 117 1 1653 207 6 6 chr18 18554147 18554499 -67434435 - L1MB3 LINE L1 -352 5831 5480 1780 174 24 0 chr18 18555643 18555941 -67432993 - AluSx SINE Alu -7 305 1 2451 70 0 7 chr18 18556111 18556410 -67432524 + AluY SINE Alu 1 297 -14 1113 219 17 9 chr18 18556459 18556692 -67432242 - AluJo SINE Alu -77 235 1 758 200 0 0 chr18 18556708 18556833 -67432101 - FLAM_C SINE Alu -8 125 1 703 211 45 6 chr18 18556965 18557121 -67431813 - AluJb SINE Alu -14 298 137 26 0 0 0 chr18 18557326 18557352 -67431582 + AT_rich Low_complexity Low_complexity 1 26 0 27 29 0 0 chr18 18558201 18558235 -67430699 + AT_rich Low_complexity Low_complexity 1 34 0 238 235 104 26 chr18 18558542 18558716 -67430218 + L1MC/D LINE L1 5645 5836 -285 1833 131 13 34 chr18 18559205 18559376 -67429558 - AluSg SINE Alu -16 294 130 264 59 0 0 chr18 18559376 18559410 -67429524 + (TTA)n Simple_repeat Simple_repeat 3 36 0 1833 131 13 34 chr18 18559410 18559536 -67429398 - AluSg SINE Alu -180 130 3 1921 155 3 17 chr18 18559880 18560176 -67428758 - AluSx SINE Alu -20 292 1 10611 147 27 24 chr18 18560756 18562153 -67426781 + Tigger1 DNA MER2_type 26 1417 -1001 1281 207 24 30 chr18 18562153 18562448 -67426486 - AluJb SINE Alu -19 293 1 10611 147 27 24 chr18 18562448 18562482 -67426452 + Tigger1 DNA MER2_type 1417 1449 -969 2164 116 3 0 chr18 18562482 18562775 -67426159 + AluSg SINE Alu 1 294 -16 10611 147 27 24 chr18 18562775 18563054 -67425880 + Tigger1 DNA MER2_type 1449 1726 -692 2226 110 13 0 chr18 18563054 18563353 -67425581 + AluSp SINE Alu 1 303 -10 10611 147 27 24 chr18 18563353 18563652 -67425282 + Tigger1 DNA MER2_type 1726 2044 -374 468 214 54 9 chr18 18563650 18563762 -67425172 + Tigger1 DNA MER2_type 2302 2418 0 * 844 205 141 25 chr18 18564427 18564710 -67424224 - MER33 DNA MER1_type -1 323 8 1515 211 24 14 chr18 18564830 18565119 -67423815 - AluJo SINE Alu -20 292 1 412 207 27 120 chr18 18566980 18567130 -67421804 - L1MB7 LINE L1 -9 6175 6040 1645 216 66 53 chr18 18567147 18567672 -67421262 - L1MB7 LINE L1 -258 5926 5385 1628 164 3 50 chr18 18567672 18567970 -67420964 - AluJb SINE Alu -7 305 22 1645 216 66 53 chr18 18567970 18568138 -67420796 - L1MB7 LINE L1 -799 5385 5221 439 216 62 68 chr18 18568240 18568340 -67420594 - L1MB7 LINE L1 -941 5205 5105 2202 117 7 0 chr18 18568340 18568639 -67420295 - AluY SINE Alu -10 301 1 439 216 62 68 chr18 18568639 18568700 -67420234 - L1MB7 LINE L1 -1041 5105 5045 1458 249 47 4 chr18 18568710 18569195 -67419739 - L1M4 LINE L1 -786 5360 4855 447 221 0 0 chr18 18569196 18569273 -67419661 - AluJ/FLAM SINE Alu -233 79 3 1652 211 3 0 chr18 18569540 18569834 -67419100 + AluJo SINE Alu 1 295 -17 594 231 8 0 chr18 18570474 18570591 -67418343 + FLAM_C SINE Alu 1 118 -25 282 343 30 6 chr18 18570697 18570866 -67418068 + L1MC/D LINE L1 5450 5622 -2186 445 273 16 0 chr18 18571130 18571258 -67417676 - L1MC4 LINE L1 -143 7899 7770 279 104 0 0 chr18 18571372 18571420 -67417514 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 1573 152 53 0 chr18 18571847 18572091 -67416843 - AluSx SINE Alu -14 298 42 805 167 108 25 chr18 18572969 18573173 -67415761 - L1MA4A LINE L1 -24 6279 6059 1992 139 7 7 chr18 18573203 18573513 -67415421 - AluSx SINE Alu -2 310 1 22 0 0 0 chr18 18574219 18574241 -67414693 + AT_rich Low_complexity Low_complexity 1 22 0 1806 229 77 57 chr18 18574518 18575261 -67413673 - L1ME1 LINE L1 -1 6165 5408 239 261 0 15 chr18 18575466 18575531 -67413403 - L1ME1 LINE L1 -2591 3555 3492 554 200 0 0 chr18 18575569 18575664 -67413270 + FLAM_A SINE Alu 21 115 -27 1647 117 46 0 chr18 18575664 18575754 -67413180 + AluSq SINE Alu 39 123 -190 250 24 71 0 chr18 18575754 18575796 -67413138 + A-rich Low_complexity Low_complexity 2 46 0 1647 117 46 0 chr18 18575796 18575945 -67412989 + AluSq SINE Alu 123 289 -24 1373 183 183 3 chr18 18576407 18576756 -67412178 + LOR1b LTR ERV1 50 461 0 2590 52 26 0 chr18 18576949 18577294 -67411640 + L1PA7 LINE L1 5771 6124 -30 250 204 0 0 chr18 18577310 18577359 -67411575 + MIR SINE MIR 158 206 -56 199 227 0 0 chr18 18578057 18578101 -67410833 + MIR SINE MIR 67 110 -152 1906 203 23 72 chr18 18578227 18579075 -67409859 - L1MB4 LINE L1 -57 6123 5332 2177 105 7 0 chr18 18579075 18579369 -67409565 - AluSc SINE Alu -13 296 1 236 215 0 0 chr18 18579399 18579465 -67409469 - L1MB4 LINE L1 -881 5265 5200 872 230 0 31 chr18 18579466 18579662 -67409272 - AluJo SINE Alu -15 297 108 240 260 117 26 chr18 18579739 18579816 -67409118 - L3 LINE CR1 -308 1269 1186 814 178 94 0 chr18 18579831 18580022 -67408912 - MER58 DNA MER1_type -23 2397 2189 289 261 14 0 chr18 18580116 18580185 -67408749 - MER21B LTR ERV1 -773 90 21 1596 209 10 7 chr18 18580190 18580497 -67408437 - AluJo SINE Alu -4 308 1 722 185 0 0 chr18 18580521 18580640 -67408294 - AluJo SINE Alu -192 120 2 1380 187 19 61 chr18 18580640 18580999 -67407935 + MLT1D LTR MaLR 162 505 0 1720 189 44 0 chr18 18581000 18581296 -67407638 + AluJo SINE Alu 1 309 -3 1380 257 82 18 chr18 18581300 18581906 -67407028 - L2 LINE L2 -216 3097 2458 652 210 0 8 chr18 18582006 18582130 -67406804 + FLAM_C SINE Alu 1 123 -20 1367 210 3 21 chr18 18582161 18582452 -67406482 + AluJo SINE Alu 1 286 -26 253 255 11 11 chr18 18582617 18582711 -67406223 + LTR37A LTR ERV1 240 333 -93 1498 133 0 5 chr18 18582734 18582952 -67405982 - AluSg/x SINE Alu -17 293 77 1207 122 0 6 chr18 18582965 18583129 -67405805 - AluSq SINE Alu -150 163 1 1586 172 3 35 chr18 18583147 18583437 -67405497 - AluJo SINE Alu -31 281 1 2490 214 22 26 chr18 18583458 18584079 -67404855 - L1MB8 LINE L1 -5 6173 5555 687 202 0 31 chr18 18584079 18584208 -67404726 + FLAM_A SINE Alu 1 125 -8 295 223 9 125 chr18 18584234 18584314 -67404620 - L1MB8 LINE L1 -588 5574 5509 1504 194 7 14 chr18 18584314 18584608 -67404326 - AluJb SINE Alu -20 292 1 295 223 9 125 chr18 18584608 18584639 -67404295 - L1MB8 LINE L1 -653 5509 5476 690 229 7 0 chr18 18584701 18584841 -67404093 + AluJo SINE Alu 24 164 -148 243 0 0 0 chr18 18584842 18584869 -67404065 + (TC)n Simple_repeat Simple_repeat 2 28 0 1148 192 131 27 chr18 18584872 18585132 -67403802 - AluJo SINE Alu -15 287 1 1286 242 21 3 chr18 18585382 18585671 -67403263 - AluJo SINE Alu -14 298 5 370 140 29 89 chr18 18585677 18585806 -67403128 - MLT1D LTR MaLR -297 208 89 1484 164 3 85 chr18 18586014 18586343 -67402591 - AluJb SINE Alu -10 302 1 1635 95 110 26 chr18 18586358 18586631 -67402303 - L1PA13 LINE L1 -7 6156 5861 703 250 0 0 chr18 18587028 18587184 -67401750 + MER6B DNA MER2_type 1 156 -54 289 354 127 25 chr18 18587947 18588105 -67400829 + L2 LINE L2 224 397 -2917 1634 187 0 7 chr18 18588733 18589027 -67399907 - AluSg SINE Alu -16 294 3 6544 74 33 3 chr18 18590151 18591019 -67397915 - MER11D LTR ERVK -3 894 1 369 0 0 0 chr18 18591829 18591870 -67397064 + (TG)n Simple_repeat Simple_repeat 1 41 0 1615 188 17 3 chr18 18592055 18592347 -67396587 + AluSx SINE Alu 1 296 -16 1996 110 0 0 chr18 18592461 18592734 -67396200 - AluY SINE Alu -38 273 1 361 205 331 0 chr18 18596543 18596670 -67392264 - MER5A DNA MER1_type -5 184 16 1899 130 14 3 chr18 18597576 18597869 -67391065 + AluY SINE Alu 1 296 -15 3499 57 15 4 chr18 18597871 18598326 -67390608 + L1PA4 LINE L1 5696 6155 0 248 253 118 109 chr18 18598495 18598716 -67390218 - Charlie1 DNA MER1_type -2534 227 5 19252 33 0 0 chr18 18599614 18602715 -67386219 - L1PA2 LINE L1 0 6155 3054 1602 195 7 0 chr18 18602715 18603007 -67385927 - AluSx SINE Alu -16 296 3 22 35 0 0 chr18 18603128 18603157 -67385777 + AT_rich Low_complexity Low_complexity 1 29 0 1740 160 21 4 chr18 18604579 18604883 -67384051 + AluSq SINE Alu 1 309 0 600 188 17 0 chr18 18605252 18605369 -67383565 - AluSp/q SINE Alu -24 289 171 257 284 0 0 chr18 18605369 18605436 -67383498 - MLT1L LTR MaLR -405 210 144 817 247 54 0 chr18 18605638 18605824 -67383110 - MER58A DNA MER1_type 0 224 29 1800 122 25 7 chr18 18605832 18606111 -67382823 - HERVK22 LTR ERVK -6542 295 12 1814 212 55 23 chr18 18606119 18606591 -67382343 - LTR22B LTR ERVK -5 487 1 23 0 0 0 chr18 18606648 18606671 -67382263 + AT_rich Low_complexity Low_complexity 1 23 0 405 350 93 19 chr18 18606867 18607190 -67381744 - L2 LINE L2 -942 2372 2026 390 42 0 0 chr18 18607542 18607590 -67381344 + (TC)n Simple_repeat Simple_repeat 1 48 0 324 0 0 0 chr18 18607589 18607625 -67381309 + (CA)n Simple_repeat Simple_repeat 1 36 0 * 3149 194 49 23 chr18 18607629 18608288 -67380646 - MER44D DNA MER2_type 0 705 30 1032 189 53 66 chr18 18608282 18608526 -67380408 + MER21A LTR ERV1 667 907 -24 * 555 209 0 27 chr18 18608989 18609099 -67379835 - FLAM_A SINE Alu -32 110 4 398 378 5 15 chr18 18609262 18609458 -67379476 - MIR SINE MIR -6 256 63 219 198 8 83 chr18 18609922 18610043 -67378891 + T-rich Low_complexity Low_complexity 5 116 0 2355 60 10 3 chr18 18611798 18612097 -67376837 + AluY SINE Alu 1 301 -10 644 202 9 0 chr18 18612974 18613088 -67375846 + FLAM_A SINE Alu 4 118 -15 21 36 0 0 chr18 18613622 18613650 -67375284 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr18 18613780 18613805 -67375129 + AT_rich Low_complexity Low_complexity 1 25 0 1798 151 34 3 chr18 18613818 18614116 -67374818 - AluSc SINE Alu -2 307 1 1739 64 0 5 chr18 18614126 18614345 -67374589 - AluY SINE Alu -10 301 84 27 29 0 0 chr18 18614515 18614549 -67374385 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr18 18615115 18615138 -67373796 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr18 18615386 18615410 -67373524 + AT_rich Low_complexity Low_complexity 1 24 0 685 249 61 0 chr18 18615496 18615693 -67373241 + L1MA4 LINE L1 6088 6296 -4 24 67 0 0 chr18 18615960 18616005 -67372929 + AT_rich Low_complexity Low_complexity 1 45 0 21 57 0 0 chr18 18616840 18616875 -67372059 + AT_rich Low_complexity Low_complexity 1 35 0 231 368 90 38 chr18 18617374 18617741 -67371193 + L2 LINE L2 2590 2975 -339 1920 101 0 4 chr18 18618663 18618921 -67370013 + AluY SINE Alu 50 306 -5 295 305 81 46 chr18 18619548 18619745 -67369189 + MIR SINE MIR 9 212 -50 205 339 110 8 chr18 18620171 18620298 -67368636 - L2 LINE L2 -228 3085 2946 186 300 114 29 chr18 18620290 18620360 -67368574 + L2 LINE L2 3168 3243 -29 * 21 36 0 0 chr18 18620554 18620582 -67368352 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr18 18621107 18621137 -67367797 + AT_rich Low_complexity Low_complexity 1 30 0 1679 164 43 16 chr18 18621139 18621443 -67367491 + AluSx SINE Alu 1 312 0 358 221 307 21 chr18 18622137 18622277 -67366657 - MER5A DNA MER1_type -1 188 9 24 85 0 0 chr18 18622969 18623028 -67365906 + AT_rich Low_complexity Low_complexity 1 59 0 449 154 11 0 chr18 18624434 18624525 -67364409 + (TG)n Simple_repeat Simple_repeat 1 92 0 1049 32 0 0 chr18 18624557 18624701 -67364233 + AluY SINE Alu 161 304 0 190 0 0 0 chr18 18624680 18624723 -67364211 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 261 306 25 19 chr18 18624921 18625078 -67363856 - L1ME3A LINE L1 -243 5927 5770 4100 82 7 10 chr18 18625313 18626284 -67362650 - L1P2 LINE L1 -338 5816 4851 297 302 68 16 chr18 18626285 18626537 -67362397 - L1MEc LINE L1 -2721 3494 3230 1391 249 19 5 chr18 18626554 18626911 -67362023 - MLT1A1 LTR MaLR 0 396 6 772 295 45 28 chr18 18626924 18627321 -67361613 - L1MEc LINE L1 -3021 3194 2791 1216 224 40 99 chr18 18627338 18627936 -67360998 - L1MEc LINE L1 -3524 2691 2198 303 28 0 0 chr18 18627936 18627972 -67360962 + (TA)n Simple_repeat Simple_repeat 1 36 0 1216 224 40 99 chr18 18627972 18628213 -67360721 - L1MEc LINE L1 -4017 2198 1944 339 239 36 72 chr18 18628366 18628504 -67360430 - L1MEc LINE L1 -5270 1126 994 937 337 87 33 chr18 18628508 18629178 -67359756 - L1MEc LINE L1 -5651 745 40 360 282 86 0 chr18 18629392 18629509 -67359425 + L2 LINE L2 3187 3313 0 339 305 91 13 chr18 18629986 18630284 -67358650 - L1ME4a LINE L1 -283 5838 5518 22 56 0 0 chr18 18630430 18630466 -67358468 + AT_rich Low_complexity Low_complexity 1 36 0 241 238 71 0 chr18 18633356 18633440 -67355494 - L1MC4 LINE L1 -1339 6703 6614 331 310 63 7 chr18 18634244 18634386 -67354548 - L2 LINE L2 -443 2871 2722 324 0 0 0 chr18 18635768 18635804 -67353130 + (CA)n Simple_repeat Simple_repeat 2 37 0 5516 131 50 55 chr18 18635832 18638604 -67350330 - SVA Other Other -518 1384 391 4369 273 37 26 chr18 18638617 18638742 -67350192 + L1P LINE L1 1738 1860 -4286 2029 142 0 0 chr18 18638742 18639037 -67349897 - AluSx SINE Alu -17 295 1 4369 273 37 26 chr18 18639037 18640606 -67348328 + L1P LINE L1 1860 3450 -2696 3168 203 21 3 chr18 18640608 18641224 -67347710 + MSTB-int LTR MaLR 1020 1646 -5 1702 237 16 0 chr18 18641229 18641600 -67347334 + MSTB LTR MaLR 1 377 -49 2188 218 14 10 chr18 18641602 18642097 -67346837 + L1 LINE L1 3447 3943 -2203 1724 142 32 4 chr18 18642097 18642373 -67346561 + AluSx SINE Alu 2 286 -22 219 36 0 0 chr18 18642373 18642401 -67346533 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 287 191 0 16 chr18 18642408 18642471 -67346463 + L1 LINE L1 2769 2830 -3316 215 316 17 35 chr18 18643248 18643422 -67345512 + CT-rich Low_complexity Low_complexity 5 175 0 567 269 60 57 chr18 18644657 18645040 -67343894 + HSREP522 Satellite telomeric 121 504 0 232 261 102 25 chr18 18646711 18646868 -67342066 - L1MDb LINE L1 -5787 622 454 742 322 109 30 chr18 18646875 18647350 -67341584 - L1MDb LINE L1 -5793 616 104 24 0 0 0 chr18 18647477 18647501 -67341433 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr18 18647576 18647598 -67341336 + AT_rich Low_complexity Low_complexity 1 22 0 2100 122 0 3 chr18 18647874 18648168 -67340766 - AluSx SINE Alu -19 293 1 586 241 99 0 chr18 18648170 18648311 -67340623 - FRAM SINE Alu -21 155 1 205 54 54 81 chr18 18649006 18649080 -67339854 + (CCCA)n Simple_repeat Simple_repeat 4 75 0 266 115 0 94 chr18 18649090 18649282 -67339652 + (CCCCCA)n Simple_repeat Simple_repeat 2 175 0 1222 140 34 24 chr18 18649738 18649945 -67338989 + AluJo SINE Alu 6 214 -98 491 314 41 18 chr18 18650067 18650287 -67338647 - MIR SINE MIR -36 226 2 189 274 113 28 chr18 18650589 18650695 -67338239 - L2 LINE L2 0 3272 3158 2355 92 0 3 chr18 18651372 18651675 -67337259 + AluSg SINE Alu 1 302 -8 350 292 30 46 chr18 18651678 18651818 -67337116 + MIR SINE MIR 28 160 -48 506 256 221 5 chr18 18652104 18652303 -67336631 + MIR SINE MIR 14 255 -7 21 0 0 0 chr18 18653838 18653859 -67335075 + AT_rich Low_complexity Low_complexity 1 21 0 463 120 76 22 chr18 18653998 18654090 -67334844 - AluSg SINE Alu -213 97 1 21 36 0 0 chr18 18657438 18657466 -67331468 + AT_rich Low_complexity Low_complexity 1 28 0 259 105 88 88 chr18 18657537 18657594 -67331340 - tRNA-Thr-ACA tRNA tRNA -13 63 7 201 171 73 0 chr18 18659581 18659622 -67329312 + GA-rich Low_complexity Low_complexity 6 49 0 260 185 0 15 chr18 18659952 18660017 -67328917 + GA-rich Low_complexity Low_complexity 3 66 0 298 340 63 13 chr18 18661402 18661561 -67327373 + MIR SINE MIR 2 168 -94 552 30 0 0 chr18 18661805 18661871 -67327063 + (TG)n Simple_repeat Simple_repeat 2 67 0 219 36 0 0 chr18 18662334 18662362 -67326572 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 409 154 88 11 chr18 18662395 18662486 -67326448 - AluS SINE Alu -213 99 2 274 220 77 44 chr18 18663117 18663228 -67325706 + AluSg SINE Alu 2 101 -199 394 194 78 39 chr18 18664113 18664319 -67324615 - FLAM_C SINE Alu -27 106 1 324 0 0 0 chr18 18664507 18664543 -67324391 + (CA)n Simple_repeat Simple_repeat 2 37 0 253 0 54 0 chr18 18664738 18664775 -67324159 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 28 29 0 0 chr18 18665079 18665114 -67323820 + AT_rich Low_complexity Low_complexity 1 35 0 256 260 56 26 chr18 18666780 18666953 -67321981 + FRAM/FAM SINE Alu 1 55 -111 259 121 15 121 chr18 18667103 18667169 -67321765 - MER4E LTR ERV1 -33 746 688 303 230 89 18 chr18 18667848 18667957 -67320977 - FRAM/FAM SINE Alu -79 87 1 432 0 0 0 chr18 18668518 18668566 -67320368 + (CAT)n Simple_repeat Simple_repeat 1 48 0 372 266 91 21 chr18 18668570 18668713 -67320221 - FRAM SINE Alu -14 152 1 243 0 0 0 chr18 18669925 18669952 -67318982 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 558 0 0 0 chr18 18670538 18670600 -67318334 + (TC)n Simple_repeat Simple_repeat 1 62 0 351 0 0 0 chr18 18670599 18670638 -67318296 + (CA)n Simple_repeat Simple_repeat 1 39 0 * 201 74 0 0 chr18 18671518 18671545 -67317389 + (CACCC)n Simple_repeat Simple_repeat 4 30 0 203 279 79 79 chr18 18673759 18673924 -67315010 - L2 LINE L2 -41 3272 3108 186 309 0 18 chr18 18674095 18674150 -67314784 - L2 LINE L2 -491 2823 2770 378 91 0 0 chr18 18674153 18674208 -67314726 + (TG)n Simple_repeat Simple_repeat 1 55 0 573 15 0 0 chr18 18674223 18674289 -67314645 + (GA)n Simple_repeat Simple_repeat 1 66 0 249 33 0 0 chr18 18674776 18674806 -67314128 + (CATCC)n Simple_repeat Simple_repeat 2 31 0 192 40 0 0 chr18 18674989 18675014 -67313920 + (T)n Simple_repeat Simple_repeat 1 25 0 408 71 0 0 chr18 18677263 18677319 -67311615 + (TGGA)n Simple_repeat Simple_repeat 4 59 0 296 228 126 36 chr18 18678279 18678446 -67310488 + AluJo SINE Alu 120 301 -1 484 145 108 72 chr18 18679616 18679782 -67309152 - FRAM SINE Alu -3 173 2 360 0 0 0 chr18 18680039 18680079 -67308855 + (TG)n Simple_repeat Simple_repeat 2 41 0 240 175 35 0 chr18 18681125 18681182 -67307752 - FLAM_A SINE Alu 0 133 75 248 213 0 67 chr18 18681562 18681637 -67307297 + Tigger2 DNA MER2_type 1 70 -2648 872 239 204 30 chr18 18681882 18682313 -67306621 + Tigger2 DNA MER2_type 83 588 -2130 305 269 90 14 chr18 18682302 18682447 -67306487 + Tigger2 DNA MER2_type 2540 2695 -23 * 235 319 52 44 chr18 18683465 18683600 -67305334 - L2 LINE L2 0 3272 3137 422 215 85 57 chr18 18684076 18684253 -67304681 - AluJo SINE Alu -4 298 117 245 138 0 52 chr18 18684633 18684691 -67304243 + (TCCCC)n Simple_repeat Simple_repeat 4 58 0 1729 132 0 0 chr18 18685293 18685528 -67303406 - AluSc SINE Alu -74 235 1 613 158 45 10 chr18 18685535 18685563 -67303371 - L1MB4 LINE L1 -208 5966 5940 2376 87 0 3 chr18 18685563 18685863 -67303071 - AluY SINE Alu -12 299 1 613 158 45 10 chr18 18685863 18685978 -67302956 - L1MB4 LINE L1 -234 5940 5820 504 0 0 0 chr18 18685984 18686040 -67302894 + (TA)n Simple_repeat Simple_repeat 2 57 0 696 217 0 0 chr18 18686040 18686160 -67302774 - AluJo SINE Alu -191 121 2 1613 207 35 3 chr18 18686163 18686501 -67302433 - L1MB4 LINE L1 -355 5828 5480 2102 130 0 10 chr18 18687077 18687378 -67301556 - AluSg SINE Alu -12 298 1 984 242 113 34 chr18 18687659 18687943 -67300991 - MER21B LTR ERV1 -57 806 487 1618 187 3 23 chr18 18687943 18688243 -67300691 - AluJo SINE Alu -13 299 6 984 242 113 34 chr18 18688243 18688313 -67300621 - MER21B LTR ERV1 -376 487 424 1067 191 0 22 chr18 18688314 18688492 -67300442 + AluJb SINE Alu 2 175 -137 1671 176 0 23 chr18 18688747 18689049 -67299885 - AluJo SINE Alu -7 305 11 2217 126 3 3 chr18 18689064 18689373 -67299561 - AluSx SINE Alu -3 309 1 2339 191 38 112 chr18 18689375 18689440 -67299494 - L1MB8 LINE L1 -3 6175 6107 1507 222 0 0 chr18 18689440 18689746 -67299188 + AluJb SINE Alu 1 306 -6 2339 191 38 112 chr18 18689746 18690314 -67298620 - L1MB8 LINE L1 -71 6107 5601 602 202 0 47 chr18 18690314 18690443 -67298491 + FLAM_A SINE Alu 1 123 -10 2339 191 38 112 chr18 18690443 18690540 -67298394 - L1MB8 LINE L1 -577 5601 5498 1631 197 3 10 chr18 18690540 18690839 -67298095 - AluJb SINE Alu -15 297 1 182 91 30 0 chr18 18691059 18691092 -67297842 + T-rich Low_complexity Low_complexity 3 36 0 493 138 11 0 chr18 18691110 18691204 -67297730 - L1PB1 LINE L1 -1 6150 6056 32 26 0 0 chr18 18691210 18691249 -67297685 + AT_rich Low_complexity Low_complexity 1 39 0 1978 149 14 7 chr18 18691508 18691823 -67297111 - AluSx SINE Alu 0 312 1 2296 104 0 7 chr18 18692094 18692392 -67296542 + AluSc SINE Alu 1 296 -13 2200 113 34 13 chr18 18892992 18893372 -67095562 + L1MA1 LINE L1 5915 6302 0 339 244 0 0 chr18 18893387 18893477 -67095457 - L1PB4 LINE L1 -7 6149 6060 9964 147 18 22 chr18 18893513 18895342 -67093592 + L1P LINE L1 1 1821 -4325 841 219 46 62 chr18 18895829 18896053 -67092881 - MER33 DNA MER1_type -2284 301 82 1865 189 38 53 chr18 18896053 18896503 -67092431 - LTR47B LTR ERVL 0 443 1 841 219 46 62 chr18 18896503 18896584 -67092350 - MER33 DNA MER1_type -2503 82 1 360 64 0 0 chr18 18897444 18897491 -67091443 + (TG)n Simple_repeat Simple_repeat 2 48 0 734 176 0 0 chr18 18897498 18897617 -67091317 - FLAM_A SINE Alu -14 119 1 333 366 9 0 chr18 18897775 18897887 -67091047 + MIR SINE MIR 34 146 -116 820 290 75 40 chr18 18898522 18898974 -67089960 - MLT1K LTR MaLR -97 491 24 25 75 0 0 chr18 18899267 18899320 -67089614 + AT_rich Low_complexity Low_complexity 1 53 0 30 0 0 0 chr18 18899650 18899680 -67089254 + AT_rich Low_complexity Low_complexity 1 30 0 1446 198 19 22 chr18 18899855 18899866 -67089068 + L1MC1 LINE L1 6004 6014 -319 2307 107 0 10 chr18 18899866 18900175 -67088759 - AluSx SINE Alu -6 306 1 1446 198 19 22 chr18 18900175 18900482 -67088452 + L1MC1 LINE L1 6014 6321 -12 286 245 39 10 chr18 18900685 18900787 -67088147 + L1M4 LINE L1 4626 4730 -1416 2235 86 13 0 chr18 18900922 18901235 -67087699 - L1P LINE L1 -1861 4285 3969 * 8975 89 30 9 chr18 18901233 18902623 -67086311 + L1P LINE L1 2544 3963 -2183 212 348 102 0 chr18 18902627 18902745 -67086189 - MIR SINE MIR -108 154 25 215 173 19 0 chr18 19003738 19003790 -66985144 + CT-rich Low_complexity Low_complexity 3 55 0 2490 83 3 0 chr18 19004368 19004680 -66984254 + AluSp SINE Alu 1 313 0 2138 103 7 0 chr18 19005181 19005498 -66983436 - AluSx SINE Alu 0 319 1 182 65 65 0 chr18 19005611 19005642 -66983292 + A-rich Low_complexity Low_complexity 2 34 0 233 29 29 0 chr18 19005818 19005852 -66983082 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1020 147 0 29 chr18 19006315 19006485 -66982449 + FRAM SINE Alu 2 166 -10 2081 116 14 0 chr18 19007057 19007349 -66981585 + AluSx SINE Alu 1 296 -16 22 80 0 0 chr18 19009703 19009753 -66979181 + AT_rich Low_complexity Low_complexity 1 50 0 298 236 39 31 chr18 19010030 19010157 -66978777 - L1ME LINE L1 -301 5820 5693 304 258 22 22 chr18 19010522 19010611 -66978323 + MIR SINE MIR 49 137 -71 282 116 0 0 chr18 19010611 19010654 -66978280 + (TTCC)n Simple_repeat Simple_repeat 1 43 0 1820 139 22 38 chr18 19010654 19010971 -66977963 - AluJo SINE Alu 0 312 1 222 37 0 0 chr18 19014495 19014522 -66974412 + (CA)n Simple_repeat Simple_repeat 2 28 0 2176 112 20 3 chr18 19014575 19014879 -66974055 + AluSx SINE Alu 1 309 -3 400 213 189 98 chr18 19014969 19015072 -66973862 - MER5A DNA MER1_type -2 187 62 2262 123 0 7 chr18 19015072 19015381 -66973553 - AluSx SINE Alu -5 307 1 400 213 189 98 chr18 19015381 19015441 -66973493 - MER5A DNA MER1_type -127 62 9 1298 101 0 16 chr18 19015467 19015656 -66973278 + L1MA2 LINE L1 6119 6304 0 250 211 0 99 chr18 19016632 19016703 -66972231 - L1ME4a LINE L1 -69 6052 5989 238 300 11 33 chr18 19016751 19016841 -66972093 - L1ME4a LINE L1 -233 5888 5801 186 326 121 30 chr18 19017009 19017141 -66971793 - MIR3 SINE MIR -6 202 59 2438 78 0 7 chr18 19017143 19017449 -66971485 - AluSp SINE Alu -9 304 1 2405 89 0 9 chr18 19018449 19018765 -66970169 - AluSq SINE Alu 0 313 1 30 27 0 0 chr18 19018825 19018862 -66970072 + AT_rich Low_complexity Low_complexity 1 37 0 183 234 72 72 chr18 19019074 19019241 -66969693 + L2 LINE L2 702 868 -2446 1288 124 0 0 chr18 19019319 19019520 -66969414 - AluSp SINE Alu 0 334 134 1462 107 29 0 chr18 19019520 19019725 -66969209 - AluSq SINE Alu -9 304 94 700 101 0 9 chr18 19019839 19019948 -66968986 + (TCTCC)n Simple_repeat Simple_repeat 5 112 0 4169 213 39 63 chr18 19019949 19019960 -66968974 - L1M4 LINE L1 -2451 3695 3685 1063 201 0 0 chr18 19019960 19020124 -66968810 - FRAM SINE Alu -2 164 1 4169 213 39 63 chr18 19020124 19020452 -66968482 - L1M4 LINE L1 -2461 3685 3351 2147 174 8 37 chr18 19020452 19020854 -66968080 - MLT1B LTR MaLR 0 390 1 4169 213 39 63 chr18 19020854 19021200 -66967734 - L1M4 LINE L1 -2795 3351 2998 2528 64 3 10 chr18 19021200 19021513 -66967421 - AluSp SINE Alu -2 311 1 4169 213 39 63 chr18 19021513 19021603 -66967331 - L1M4 LINE L1 -3148 2998 2907 2051 125 0 11 chr18 19021603 19021934 -66967000 - AluSx SINE Alu 0 328 1 4169 213 39 63 chr18 19021934 19022520 -66966414 - L1M4 LINE L1 -3239 2907 2364 2454 87 0 3 chr18 19022520 19022832 -66966102 - AluY SINE Alu 0 311 1 4169 213 39 63 chr18 19022832 19022913 -66966021 - L1M4 LINE L1 -3782 2364 2283 440 303 71 20 chr18 19022913 19023167 -66965767 - L1M4 LINE L1 -977 5169 4903 27 0 0 0 chr18 19023272 19023299 -66965635 + AT_rich Low_complexity Low_complexity 1 27 0 2488 90 0 0 chr18 19023306 19023616 -66965318 - AluSx SINE Alu -2 310 1 339 236 132 28 chr18 19023621 19023765 -66965169 - L1MC5 LINE L1 -54 7907 7749 21 57 0 0 chr18 19024639 19024674 -66964260 + AT_rich Low_complexity Low_complexity 1 35 0 2074 124 0 3 chr18 19024802 19025092 -66963842 + AluSx SINE Alu 1 289 -23 261 0 0 0 chr18 19025107 19025136 -66963798 + (TG)n Simple_repeat Simple_repeat 2 30 0 303 196 0 0 chr18 19025140 19025196 -66963738 + L1MC4 LINE L1 6648 6703 -1339 326 290 28 19 chr18 19025270 19025377 -66963557 + MIR SINE MIR 150 257 -5 355 348 120 60 chr18 19025918 19026251 -66962683 - L2 LINE L2 -5 3267 2915 909 317 130 14 chr18 19026417 19026934 -66962000 - L2 LINE L2 -579 2735 2159 1713 178 14 0 chr18 19026963 19027244 -66961690 + AluJb SINE Alu 3 287 -25 486 0 0 0 chr18 19027275 19027329 -66961605 + (TG)n Simple_repeat Simple_repeat 2 55 0 1837 178 0 0 chr18 19027329 19027622 -66961312 - AluJb SINE Alu -19 293 1 816 175 0 0 chr18 19027719 19027839 -66961095 - AluJb SINE Alu -191 121 2 1168 223 90 60 chr18 19028047 19028534 -66960400 + L1MC5 LINE L1 7244 7656 -305 256 224 30 0 chr18 19028556 19028623 -66960311 + L1MC5 LINE L1 7810 7878 -83 1697 168 39 11 chr18 19028623 19028908 -66960026 + AluJb SINE Alu 14 306 -6 794 162 40 165 chr18 19028913 19028994 -66959940 + L1MC5 LINE L1 7649 7739 -222 1831 163 7 14 chr18 19028994 19029288 -66959646 + AluJo SINE Alu 1 292 -20 2620 54 0 10 chr18 19029288 19029601 -66959333 + AluY SINE Alu 1 310 -1 794 162 40 165 chr18 19029601 19029821 -66959113 + L1MC5 LINE L1 7737 7913 -48 272 276 98 65 chr18 19030529 19030652 -66958282 + MIR SINE MIR 80 206 -56 305 263 0 20 chr18 19031754 19031853 -66957081 + L1ME4a LINE L1 5960 6056 -65 199 200 263 38 chr18 19032287 19032367 -66956567 - L2 LINE L2 -33 3239 3142 305 265 98 15 chr18 19032490 19032622 -66956312 - L2 LINE L2 -183 3089 2947 209 0 97 0 chr18 19033445 19033476 -66955458 + GA-rich Low_complexity Low_complexity 2 35 0 2015 129 23 7 chr18 19033513 19033815 -66955119 - AluSx SINE Alu -5 307 1 1919 91 40 54 chr18 19033819 19034117 -66954817 - AluSx SINE Alu -18 294 1 998 201 118 53 chr18 19034296 19034619 -66954315 + MER2 DNA MER2_type 1 344 0 358 286 16 16 chr18 19034826 19034952 -66953982 + L1MC4a LINE L1 4226 4351 -1795 * 1780 197 74 50 chr18 19034932 19034975 -66953959 + L1MC4a LINE L1 4814 4854 -1312 2029 133 14 0 chr18 19034975 19035268 -66953666 - AluSx SINE Alu -11 301 5 1780 197 74 50 chr18 19035268 19035617 -66953317 + L1MC4a LINE L1 4854 5249 -917 2325 89 0 10 chr18 19035617 19035921 -66953013 + AluSg SINE Alu 4 304 -6 1780 197 74 50 chr18 19035921 19036105 -66952829 + L1MC4a LINE L1 5249 5427 -739 861 122 0 36 chr18 19036212 19036351 -66952583 - FRAM SINE Alu -5 171 38 446 211 51 13 chr18 19036375 19036531 -66952403 - L1M4 LINE L1 -863 5283 5122 1703 158 8 0 chr18 19036558 19036823 -66952111 - AluSx SINE Alu -45 267 1 612 197 36 0 chr18 19036823 19036960 -66951974 - ORSL DNA AcHobo -133 142 1 4230 196 31 16 chr18 19037576 19038309 -66950625 - L1MB7 LINE L1 -13 6171 5425 2383 96 3 0 chr18 19038309 19038611 -66950323 - AluSp SINE Alu -10 303 1 4230 196 31 16 chr18 19038611 19038862 -66950072 - L1MB7 LINE L1 -759 5425 5179 2917 128 34 13 chr18 19038862 19039332 -66949602 - L1MA4 LINE L1 -6 6294 5815 793 268 55 72 chr18 19039433 19039471 -66949463 + L1ME3A LINE L1 5759 5796 -374 1743 164 0 48 chr18 19039471 19039782 -66949152 + AluJb SINE Alu 1 296 -16 793 268 55 72 chr18 19039782 19040053 -66948881 + L1ME3A LINE L1 5796 6062 -108 207 0 0 0 chr18 19040053 19040076 -66948858 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 793 268 55 72 chr18 19040076 19040183 -66948751 + L1ME3A LINE L1 6062 6169 -1 2213 87 0 39 chr18 19041105 19041414 -66947520 - AluSg SINE Alu 0 310 14 184 327 127 0 chr18 19041712 19041822 -66947112 - L2 LINE L2 0 3313 3190 262 320 21 10 chr18 19041983 19042080 -66946854 + MLT1K LTR MaLR 152 249 -339 540 265 23 23 chr18 19042553 19042685 -66946249 + L2 LINE L2 3141 3272 0 573 283 106 21 chr18 19042920 19043257 -66945677 + L1MC4a LINE L1 5508 5756 -365 1476 254 45 33 chr18 19043771 19044197 -66944737 + L1MEc LINE L1 37 467 -5929 1477 181 59 4 chr18 19044219 19044489 -66944445 + AluJo SINE Alu 1 285 -27 260 206 29 20 chr18 19044490 19044592 -66944342 + GA-rich Low_complexity Low_complexity 1 103 0 3837 247 93 42 chr18 19044593 19045451 -66943483 + L1MEc LINE L1 468 1281 -5115 1987 65 0 8 chr18 19045451 19045696 -66943238 + AluY SINE Alu 56 298 -13 3837 247 93 42 chr18 19045696 19045729 -66943205 + L1MEc LINE L1 1281 1311 -5085 1951 123 25 4 chr18 19045729 19046039 -66942895 + AluSx SINE Alu 1 316 0 3837 247 93 42 chr18 19046039 19046225 -66942709 + L1MEc LINE L1 1311 1486 -4910 1933 129 37 10 chr18 19046225 19046519 -66942415 + AluSx SINE Alu 1 302 -10 3837 247 93 42 chr18 19046519 19046695 -66942239 + L1MEc LINE L1 1486 1652 -4744 2198 85 41 7 chr18 19046695 19046990 -66941944 + AluY SINE Alu 1 305 -6 3837 247 93 42 chr18 19046990 19047226 -66941708 + L1MEc LINE L1 1652 2037 -4359 1244 166 10 0 chr18 19047235 19047440 -66941494 + MER2 DNA MER2_type 1 207 -138 2083 104 6 41 chr18 19047470 19047809 -66941125 - AluSq SINE Alu 0 313 1 1528 108 23 105 chr18 19047882 19048187 -66940747 + MER7A DNA MER2_type 1 278 -68 2606 228 71 29 chr18 19048287 19049007 -66939927 + L1ME1 LINE L1 5412 6161 -5 320 318 39 28 chr18 19049016 19049195 -66939739 + L3 LINE CR1 844 1024 -553 226 283 0 19 chr18 19049344 19049397 -66939537 - L2 LINE L2 -8 3264 3213 214 235 20 0 chr18 19050052 19050103 -66938831 + (TA)n Simple_repeat Simple_repeat 2 53 0 1378 275 149 17 chr18 19050155 19050660 -66938274 - L1MC4a LINE L1 -1785 6023 5415 2215 108 3 0 chr18 19050660 19050948 -66937986 - AluSg SINE Alu -21 289 1 1378 275 149 17 chr18 19050948 19051081 -66937853 - L1MC4a LINE L1 -2393 5415 5301 411 282 163 77 chr18 19051081 19051298 -66937636 - LTR16C LTR ERVL 0 491 229 1844 150 14 7 chr18 19051298 19051591 -66937343 + AluJo SINE Alu 1 295 -17 411 282 163 77 chr18 19051591 19051735 -66937199 - LTR16C LTR ERVL -262 229 99 2183 120 0 3 chr18 19052006 19052297 -66936637 + AluSx SINE Alu 1 290 -22 229 139 0 0 chr18 19052299 19052335 -66936599 + Alu SINE Alu 260 295 -7 2075 147 22 78 chr18 19052340 19052749 -66936185 - L1MB8 LINE L1 -9 6169 5784 655 157 54 48 chr18 19052795 19052961 -66935973 - L1MB8 LINE L1 -809 5337 5171 5188 190 33 43 chr18 19053007 19053776 -66935158 - L1M4 LINE L1 -418 5766 4990 2303 87 0 7 chr18 19053776 19054075 -66934859 - AluSg SINE Alu -13 297 1 5188 190 33 43 chr18 19054075 19054397 -66934537 - L1M4 LINE L1 -1194 4990 4666 2539 65 0 3 chr18 19054397 19054706 -66934228 + AluY SINE Alu 3 310 -1 5188 190 33 43 chr18 19054706 19054940 -66933994 - L1M4 LINE L1 -1518 4666 4431 1924 172 0 3 chr18 19054940 19055243 -66933691 + AluJo SINE Alu 1 302 -10 5188 190 33 43 chr18 19055243 19055625 -66933309 - L1M4 LINE L1 -1753 4431 4083 2811 22 0 0 chr18 19055625 19055937 -66932997 + AluYb8 SINE Alu 1 312 -6 5188 190 33 43 chr18 19055937 19056011 -66932923 - L1M4 LINE L1 -2101 4083 4010 252 100 0 0 chr18 19056026 19056066 -66932868 + (T)n Simple_repeat Simple_repeat 1 40 0 1082 217 0 20 chr18 19056098 19056342 -66932592 - L1M4 LINE L1 -2129 4017 3779 439 137 0 14 chr18 19056343 19056416 -66932518 - AluSp/q SINE Alu -18 295 224 2314 104 0 3 chr18 19056418 19056725 -66932209 - AluSq SINE Alu -7 306 1 295 260 0 0 chr18 19056725 19056798 -66932136 - L1M4 LINE L1 -2360 3786 3714 418 115 39 0 chr18 19056814 19056892 -66932042 + CT-rich Low_complexity Low_complexity 1 81 0 2110 128 0 0 chr18 19057119 19057408 -66931526 - AluSg SINE Alu -2 308 20 2528 89 0 0 chr18 19057431 19057744 -66931190 - AluSq SINE Alu 0 313 1 21 36 0 0 chr18 19057821 19057849 -66931085 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr18 19058211 19058238 -66930696 + AT_rich Low_complexity Low_complexity 1 27 0 2183 53 6 102 chr18 19058612 19058956 -66929978 + AluY SINE Alu 1 313 0 1166 76 38 0 chr18 19058956 19059114 -66929820 + AluY SINE Alu 134 297 -14 313 283 50 42 chr18 19059222 19059342 -66929592 - L2 LINE L2 -5 3308 3188 542 325 43 17 chr18 19059581 19059815 -66929119 + MIR SINE MIR 20 259 -3 459 237 0 11 chr18 19060710 19060803 -66928131 + L2 LINE L2 3190 3281 -32 870 60 0 0 chr18 19060817 19060934 -66928000 + (TGGA)n Simple_repeat Simple_repeat 1 117 0 459 222 0 30 chr18 19061128 19061227 -66927707 + L2 LINE L2 3173 3268 -4 293 280 114 46 chr18 19062323 19062498 -66926436 - L1ME LINE L1 -351 5770 5584 489 158 0 48 chr18 19063779 19063925 -66925009 + CT-rich Low_complexity Low_complexity 1 139 0 1655 174 48 3 chr18 19063931 19064225 -66924709 - AluJb SINE Alu -5 307 1 196 175 32 0 chr18 19064300 19064363 -66924571 + (TA)n Simple_repeat Simple_repeat 1 65 0 2050 153 0 0 chr18 19066921 19067216 -66921718 + AluSx SINE Alu 1 295 -17 958 130 0 27 chr18 19067250 19067396 -66921538 + AluJb SINE Alu 3 144 -168 538 154 0 0 chr18 19067399 19067490 -66921444 + Alu SINE Alu 218 308 -2 1512 162 0 15 chr18 19068270 19068542 -66920392 - AluSx SINE Alu -3 309 42 545 273 138 53 chr18 19069761 19069834 -66919100 + L1MC4a LINE L1 5959 6024 -1784 2248 125 0 0 chr18 19069834 19070145 -66918789 - AluSx SINE Alu -1 311 1 545 273 138 53 chr18 19070145 19070530 -66918404 + L1MC4a LINE L1 6024 6470 -1338 2577 65 0 0 chr18 19070530 19070839 -66918095 - AluY SINE Alu -1 310 2 545 273 138 53 chr18 19070839 19070907 -66918027 + L1MC4a LINE L1 6470 6531 -1277 1244 171 40 0 chr18 19070992 19071191 -66917743 - AluJb SINE Alu -31 281 75 2686 232 65 77 chr18 19071272 19071643 -66917291 + L1MC4 LINE L1 6875 7249 -793 2190 85 0 51 chr18 19071643 19071959 -66916975 + AluSc SINE Alu 1 300 -9 2686 232 65 77 chr18 19071959 19072369 -66916565 + L1MC4 LINE L1 7249 7640 -402 1589 134 50 14 chr18 19072369 19072652 -66916282 - L1MA8 LINE L1 0 6291 5999 2686 232 65 77 chr18 19072652 19073035 -66915899 + L1MC4 LINE L1 7640 8026 -16 491 287 40 44 chr18 19073379 19073651 -66915283 - L1ME3A LINE L1 -198 5972 5702 459 241 46 0 chr18 19073668 19073776 -66915158 - L1ME3A LINE L1 -523 5641 5529 312 125 36 0 chr18 19073819 19073875 -66915059 - L1MC4 LINE L1 0 8042 7985 * 4382 199 37 21 chr18 19073873 19075138 -66913796 + L1MB8 LINE L1 4353 5660 -518 2359 87 0 3 chr18 19075138 19075437 -66913497 + AluY SINE Alu 1 298 -13 4382 199 37 21 chr18 19075437 19075965 -66912969 + L1MB8 LINE L1 5660 6178 0 * 4446 211 107 34 chr18 19075960 19077241 -66911693 - L1MC4a LINE L1 -40 7768 6394 1440 184 4 15 chr18 19077411 19077683 -66911251 + AluJo SINE Alu 14 282 -30 21 0 0 0 chr18 19077683 19077704 -66911230 + AT_rich Low_complexity Low_complexity 1 21 0 470 254 193 14 chr18 19077708 19078066 -66910868 - L1ME3A LINE L1 -1542 4604 4183 352 235 128 13 chr18 19078144 19078293 -66910641 + L1ME4a LINE L1 5956 6121 0 227 133 44 22 chr18 19078737 19078782 -66910152 - MIR SINE MIR -116 146 101 401 222 89 59 chr18 19078861 19078996 -66909938 + L2 LINE L2 3175 3313 0 2034 149 10 0 chr18 19079007 19079316 -66909618 - AluSx SINE Alu 0 312 1 2327 113 3 0 chr18 19080683 19080992 -66907942 + AluSx SINE Alu 1 310 -2 2157 123 25 55 chr18 19081127 19081492 -66907442 - THE1A LTR MaLR 0 355 2 2211 65 4 0 chr18 19081493 19081769 -66907165 - THE1A-int LTR MaLR 0 1580 1304 * 3200 100 34 40 chr18 19081763 19082261 -66906673 - THE1A-int LTR MaLR -564 1016 522 1186 112 39 11 chr18 19082262 19082440 -66906494 - THE1B LTR MaLR -181 183 1 207 341 0 11 chr18 19082571 19082659 -66906275 + CT-rich Low_complexity Low_complexity 1 87 0 2180 102 3 0 chr18 19082768 19083051 -66905883 - AluSg1 SINE Alu -25 284 1 2301 103 0 13 chr18 19083080 19083392 -66905542 + AluSx SINE Alu 1 308 -4 202 216 0 0 chr18 19083957 19083994 -66904940 + GA-rich Low_complexity Low_complexity 2 38 0 1990 116 10 33 chr18 19084154 19084457 -66904477 - AluSx SINE Alu -16 296 1 2449 80 0 0 chr18 19085083 19085385 -66903549 + AluY SINE Alu 1 302 -9 2054 135 0 0 chr18 19086471 19086760 -66902174 - AluSx SINE Alu -23 289 1 2070 148 0 0 chr18 19086975 19087272 -66901662 + AluJb SINE Alu 1 297 -15 1559 190 24 14 chr18 19087323 19087618 -66901316 - AluJo SINE Alu -14 298 1 2156 130 0 0 chr18 19087646 19087939 -66900995 + AluSx SINE Alu 1 293 -19 1969 135 44 0 chr18 19088315 19088612 -66900322 + AluSx SINE Alu 1 310 -2 366 23 0 0 chr18 19089008 19089014 -66899920 + (TG)n Simple_repeat Simple_repeat 1 49 0 366 23 0 0 chr18 19089014 19089057 -66899877 + (TG)n Simple_repeat Simple_repeat 2 44 0 1870 208 128 4 chr18 19089118 19089594 -66899340 - L1ME3A LINE L1 -52 6118 5584 2308 105 0 3 chr18 19089831 19090137 -66898797 - AluSx SINE Alu -7 305 1 207 0 0 0 chr18 19090221 19090244 -66898690 + (T)n Simple_repeat Simple_repeat 1 23 0 2186 125 3 0 chr18 19091273 19091578 -66897356 + AluSq SINE Alu 1 306 -7 2502 64 0 0 chr18 19092804 19093102 -66895832 + AluY SINE Alu 1 298 -13 220 330 0 0 chr18 19094348 19094416 -66894518 + MIR SINE MIR 55 122 -86 2317 82 0 33 chr18 19094450 19094754 -66894180 + AluSx SINE Alu 1 294 -18 2224 100 31 0 chr18 19094754 19095045 -66893889 + AluSx SINE Alu 1 300 -12 2396 109 0 0 chr18 19095376 19095688 -66893246 - AluSx SINE Alu 0 312 1 25 0 0 0 chr18 19095695 19095720 -66893214 + AT_rich Low_complexity Low_complexity 1 25 0 566 169 188 0 chr18 19096338 19096492 -66892442 - MER5A DNA MER1_type 0 189 7 295 194 65 0 chr18 19098052 19098114 -66890820 + MIR3 SINE MIR 105 170 -38 2461 73 0 13 chr18 19098159 19098459 -66890475 + AluY SINE Alu 1 296 -15 2623 68 0 0 chr18 19098796 19099106 -66889828 + AluY SINE Alu 1 310 -1 1118 113 0 12 chr18 19099543 19099703 -66889231 + FRAM SINE Alu 8 165 -11 2376 107 3 0 chr18 19100316 19100625 -66888309 + AluSx SINE Alu 1 310 -2 381 96 21 0 chr18 19101298 19101363 -66887571 + Alu SINE Alu 241 295 -7 569 294 113 17 chr18 19102870 19103101 -66885833 - MIR SINE MIR 0 262 10 189 0 0 0 chr18 19103836 19103857 -66885077 + (TGAA)n Simple_repeat Simple_repeat 2 22 0 230 197 14 14 chr18 19104043 19104097 -66884837 - L1ME4a LINE L1 -2 6119 6063 2308 92 16 19 chr18 19104097 19104411 -66884523 + AluSq SINE Alu 1 313 0 230 197 14 14 chr18 19104411 19104427 -66884507 - L1ME4a LINE L1 -57 6064 6049 2418 87 0 0 chr18 19104722 19105021 -66883913 - AluSx SINE Alu -13 299 1 361 279 33 22 chr18 19106134 19106317 -66882617 - LTR33 LTR ERVL -11 510 326 306 117 50 17 chr18 19106404 19106464 -66882470 - LTR33 LTR ERVL -358 163 102 2221 139 7 0 chr18 19107686 19107996 -66880938 + AluSx SINE Alu 1 312 0 2457 54 90 6 chr18 19108148 19108483 -66880451 - L1PA8 LINE L1 -5 6167 5805 2289 82 34 0 chr18 19108883 19109177 -66879757 + AluSx SINE Alu 6 309 -3 34 19 0 19 chr18 19110091 19110124 -66878810 + AT_rich Low_complexity Low_complexity 1 34 -17 2098 110 18 0 chr18 19110124 19110405 -66878529 - AluSx SINE Alu -26 286 1 34 19 0 19 chr18 19110405 19110423 -66878511 + AT_rich Low_complexity Low_complexity 34 51 0 2169 119 0 3 chr18 19110462 19110777 -66878157 - AluSx SINE Alu 0 314 1 1866 145 62 0 chr18 19110832 19111122 -66877812 - AluSx SINE Alu -3 309 2 1642 197 7 7 chr18 19111152 19111451 -66877483 + AluJo SINE Alu 1 299 -13 1297 184 32 0 chr18 19111452 19111669 -66877265 + AluJo SINE Alu 1 224 -88 208 244 49 12 chr18 19111698 19111765 -66877169 - MIR SINE MIR -153 109 40 552 235 35 29 chr18 19111765 19111935 -66876999 - MER5B DNA MER1_type -3 175 5 2335 85 3 3 chr18 19113013 19113308 -66875626 + AluSx SINE Alu 1 295 -17 4924 188 76 24 chr18 19116780 19116825 -66872109 - L1MB2 LINE L1 -2 6169 6128 2146 105 7 23 chr18 19116825 19117131 -66871803 + AluSq SINE Alu 1 301 -12 4924 188 76 24 chr18 19117131 19117993 -66870941 - L1MB2 LINE L1 -43 6128 5313 2132 105 39 0 chr18 19117993 19118278 -66870656 + AluSp SINE Alu 1 296 -17 4924 188 76 24 chr18 19118278 19118554 -66870380 - L1MB2 LINE L1 -858 5313 5053 1786 165 14 14 chr18 19118554 19118845 -66870089 - AluJo SINE Alu -21 291 1 4924 188 76 24 chr18 19118845 19119726 -66869208 - L1MB2 LINE L1 -1118 5053 3988 740 270 150 0 chr18 19119916 19120142 -66868792 - MIR SINE MIR -1 261 2 2191 128 7 0 chr18 19121135 19121432 -66867502 + AluSx SINE Alu 1 299 -13 197 125 31 0 chr18 19121479 19121511 -66867423 + MIR SINE MIR 38 70 -138 689 100 108 50 chr18 19121512 19121632 -66867302 - FLAM_C SINE Alu -10 133 7 197 299 15 0 chr18 19121646 19121713 -66867221 + MIR SINE MIR 75 142 -66 2172 98 27 14 chr18 19123778 19124074 -66864860 - AluSx SINE Alu -12 300 1 889 113 0 0 chr18 19124259 19124383 -66864551 - AluSg/x SINE Alu -12 300 177 180 159 0 68 chr18 19125407 19125451 -66863483 + L2 LINE L2 3016 3056 -216 225 205 55 118 chr18 19125830 19125957 -66862977 - L1ME4a LINE L1 -123 5998 5880 201 233 0 0 chr18 19126029 19126072 -66862862 - MIR3 SINE MIR -8 200 158 1711 167 24 7 chr18 19126081 19126375 -66862559 + AluJb SINE Alu 1 299 -13 590 268 38 0 chr18 19126545 19126702 -66862232 - MIR SINE MIR -64 198 36 1980 117 0 63 chr18 19126824 19127141 -66861793 - AluSq SINE Alu -16 297 1 2361 77 6 13 chr18 19127814 19128126 -66860808 + AluY SINE Alu 1 310 -1 1272 70 25 0 chr18 19128128 19128286 -66860648 + AluSp SINE Alu 136 297 -16 249 108 0 0 chr18 19128426 19128463 -66860471 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 600 129 124 148 chr18 19128491 19128622 -66860312 + MER20 DNA MER1_type 22 148 -71 2121 122 3 3 chr18 19128622 19128917 -66860017 + AluSx SINE Alu 1 295 -17 600 129 124 148 chr18 19128917 19128987 -66859947 + MER20 DNA MER1_type 148 218 -1 2240 99 3 13 chr18 19129091 19129393 -66859541 + AluSc SINE Alu 1 299 -10 346 259 267 43 chr18 19133941 19134424 -66854510 + L2 LINE L2 1858 2448 -866 327 226 85 19 chr18 19134626 19134732 -66854202 + MIR SINE MIR 148 260 -2 22 0 0 0 chr18 19134996 19135018 -66853916 + AT_rich Low_complexity Low_complexity 1 22 0 2148 114 0 17 chr18 19135103 19135401 -66853533 + AluSx SINE Alu 1 293 -19 216 0 0 0 chr18 19135509 19135533 -66853401 + (A)n Simple_repeat Simple_repeat 1 24 0 2099 116 7 7 chr18 19135630 19135922 -66853012 - AluSq SINE Alu -21 292 1 1832 204 85 34 chr18 19137696 19138178 -66850756 + L1M4 LINE L1 3898 4415 -1731 1574 175 38 17 chr18 19138178 19138469 -66850465 + AluJo SINE Alu 2 298 -14 1832 204 85 34 chr18 19138469 19138550 -66850384 + L1M4 LINE L1 4415 4490 -1656 947 127 8 0 chr18 19138555 19138689 -66850245 + AluJo SINE Alu 1 135 -177 1379 111 250 16 chr18 19138689 19138933 -66850001 + AluSg1 SINE Alu 1 301 -8 294 294 138 25 chr18 19139814 19139974 -66848960 + MIR SINE MIR 35 212 -50 24 0 0 0 chr18 19140248 19140272 -66848662 + AT_rich Low_complexity Low_complexity 1 24 0 1760 100 4 0 chr18 19140312 19140541 -66848393 - AluSg/x SINE Alu -11 301 72 225 100 0 0 chr18 19140541 19140571 -66848363 - Alu SINE Alu -270 30 1 1019 163 23 6 chr18 19140920 19141092 -66847842 - FAM SINE Alu 0 175 1 1066 56 0 28 chr18 19141211 19141354 -66847580 - MER85 DNA T2_type 0 139 1 2059 121 14 3 chr18 19141649 19141938 -66846996 - AluSg SINE Alu -16 294 3 898 207 72 5 chr18 19141949 19142142 -66846792 - MER58A DNA MER1_type -18 206 1 2215 111 0 10 chr18 19142234 19142397 -66846537 - AluSg SINE Alu -15 295 135 2257 100 10 3 chr18 19142397 19142698 -66846236 - AluSg SINE Alu -7 303 1 2215 111 0 10 chr18 19142698 19142832 -66846102 - AluSg SINE Alu -175 135 1 22 35 0 0 chr18 19143220 19143249 -66845685 + AT_rich Low_complexity Low_complexity 1 29 0 2159 130 0 3 chr18 19143324 19143625 -66845309 + AluSx SINE Alu 1 300 -12 264 285 89 62 chr18 19143946 19144125 -66844809 - MIR SINE MIR -30 232 49 1524 170 81 7 chr18 19144295 19144578 -66844356 + AluJo SINE Alu 9 312 0 1313 127 0 28 chr18 19144874 19145087 -66843847 + Tigger2 DNA MER2_type 1 207 -2511 776 182 5 113 chr18 19145059 19145185 -66843749 + Tigger2 DNA MER2_type 2528 2625 -83 * 904 128 0 0 chr18 19145185 19145318 -66843616 + FLAM_C SINE Alu 1 133 0 776 182 5 113 chr18 19145318 19145394 -66843540 + Tigger2 DNA MER2_type 2625 2708 0 2048 118 7 14 chr18 19146584 19146881 -66842053 + AluSg SINE Alu 1 295 -15 195 129 0 0 chr18 19147028 19147059 -66841875 + (TA)n Simple_repeat Simple_repeat 1 31 0 24 0 0 0 chr18 19148123 19148147 -66840787 + AT_rich Low_complexity Low_complexity 1 24 0 1909 93 60 43 chr18 19148333 19148634 -66840300 + AluSc SINE Alu 1 306 -3 1113 118 0 7 chr18 19149215 19149368 -66839566 - FRAM SINE Alu -27 149 1 301 297 50 10 chr18 19149399 19149500 -66839434 + MIR SINE MIR 30 134 -128 2171 79 7 11 chr18 19150168 19150447 -66838487 - AluSp SINE Alu -10 303 26 347 224 51 10 chr18 19150563 19150661 -66838273 + L1ME2 LINE L1 6061 6162 -2 334 182 136 147 chr18 19150747 19151006 -66837928 + L1MC5 LINE L1 7454 7715 -246 2261 94 0 3 chr18 19151006 19151303 -66837631 + AluY SINE Alu 1 296 -15 334 182 136 147 chr18 19151303 19151343 -66837591 + L1MC5 LINE L1 7715 7754 -207 2124 104 0 69 chr18 19151343 19151661 -66837273 + AluSq SINE Alu 5 300 -13 334 182 136 147 chr18 19151661 19151788 -66837146 + L1MC5 LINE L1 7754 7876 -85 391 210 123 74 chr18 19151991 19152113 -66836821 + L1ME3A LINE L1 5996 6129 -41 807 184 0 22 chr18 19152113 19152249 -66836685 - FLAM_C SINE Alu 0 133 1 391 210 123 74 chr18 19152249 19152288 -66836646 + L1ME3A LINE L1 6129 6165 -5 2166 111 3 0 chr18 19152306 19152603 -66836331 + AluSx SINE Alu 1 298 -14 2205 94 3 7 chr18 19152661 19152959 -66835975 + AluSq SINE Alu 1 297 -16 550 288 20 13 chr18 19153130 19153283 -66835651 + MIR SINE MIR 2 155 -107 774 154 15 44 chr18 19153283 19153419 -66835515 + AluJb SINE Alu 2 133 -179 212 258 11 56 chr18 19153441 19153530 -66835404 + MIR SINE MIR 178 262 0 1956 147 0 0 chr18 19153569 19153861 -66835073 - AluJb SINE Alu -20 292 1 275 262 114 34 chr18 19153886 19154088 -66834846 + L2 LINE L2 2783 3008 -264 193 356 113 0 chr18 19154377 19154492 -66834442 - MIR SINE MIR -133 129 2 2379 86 3 0 chr18 19154836 19155139 -66833795 + AluY SINE Alu 1 304 -7 1998 157 0 10 chr18 19155225 19155530 -66833404 + AluJb SINE Alu 1 302 -10 641 161 24 24 chr18 19155530 19155654 -66833280 + FLAM_C SINE Alu 1 124 -9 1837 162 7 7 chr18 19155672 19155968 -66832966 + AluJo SINE Alu 1 296 -16 385 311 83 31 chr18 19156241 19156434 -66832500 + MLT1L LTR MaLR 322 524 -91 1607 116 0 0 chr18 19156436 19156651 -66832283 - AluSg/x SINE Alu -19 291 77 2198 115 14 0 chr18 19156699 19156995 -66831939 + AluSx SINE Alu 1 300 -12 2495 77 0 3 chr18 19157845 19158156 -66830778 + AluY SINE Alu 1 310 -1 1987 65 150 0 chr18 19158204 19158464 -66830470 + AluY SINE Alu 1 299 -2 411 258 12 61 chr18 19158864 19159027 -66829907 + L1MCc LINE L1 1180 1334 -5089 5476 170 48 69 chr18 19159029 19159272 -66829662 + L1MC1 LINE L1 4527 4773 -1560 2807 105 13 8 chr18 19159272 19159645 -66829289 + THE1C LTR MaLR 1 375 0 5476 170 48 69 chr18 19159645 19160023 -66828911 + L1MC1 LINE L1 4773 5157 -1176 1655 204 0 0 chr18 19160023 19160317 -66828617 + AluJb SINE Alu 1 294 -18 5476 170 48 69 chr18 19160317 19160341 -66828593 + L1MC1 LINE L1 5157 5180 -1153 628 209 14 58 chr18 19160341 19160480 -66828454 + FLAM_C SINE Alu 1 133 0 5476 170 48 69 chr18 19160480 19160591 -66828343 + L1MC1 LINE L1 5180 5292 -1041 2061 108 6 37 chr18 19160591 19160914 -66828020 + AluSp SINE Alu 1 313 0 5476 170 48 69 chr18 19160914 19161502 -66827432 + L1MC1 LINE L1 5292 5831 -502 1964 112 0 66 chr18 19161502 19161645 -66827289 + AluSx SINE Alu 1 115 -197 1962 152 7 0 chr18 19161645 19161955 -66826979 + AluSx SINE Alu 1 312 0 1964 112 0 66 chr18 19161955 19162116 -66826818 + AluSx SINE Alu 115 285 -27 5476 170 48 69 chr18 19162116 19162588 -66826346 + L1MC1 LINE L1 5831 6311 -22 1274 173 0 0 chr18 19162622 19162836 -66826098 + AluJo SINE Alu 86 299 -13 944 174 54 0 chr18 19162839 19162988 -66825946 + AluJo/FRAM SINE Alu 137 293 -9 1833 170 3 16 chr18 19162994 19163306 -66825628 + AluJo SINE Alu 5 312 0 2103 118 3 0 chr18 19163719 19164008 -66824926 - AluSx SINE Alu -13 299 10 23 33 0 0 chr18 19164502 19164532 -66824402 + AT_rich Low_complexity Low_complexity 1 30 0 993 150 66 79 chr18 19164984 19165211 -66823723 - AluJb SINE Alu -3 309 86 2154 136 7 0 chr18 19165464 19165765 -66823169 + AluSx SINE Alu 1 303 -9 1070 131 17 62 chr18 19168406 19168443 -66820491 - AluJb SINE Alu -142 170 133 2151 129 3 3 chr18 19168443 19168745 -66820189 - AluSx SINE Alu -10 302 1 1070 131 17 62 chr18 19168745 19168883 -66820051 - AluJb SINE Alu -179 133 3 2161 109 0 10 chr18 19168891 19169193 -66819741 - AluSx SINE Alu -9 303 5 1905 84 103 0 chr18 19169240 19169501 -66819433 + AluSg SINE Alu 11 298 -12 1034 169 0 12 chr18 19169506 19169672 -66819262 + AluJb SINE Alu 132 295 -17 2153 122 3 0 chr18 19169892 19170186 -66818748 - AluSp SINE Alu -16 297 3 2160 121 0 0 chr18 19170376 19170665 -66818269 - AluSx SINE Alu -23 289 1 1394 216 122 55 chr18 19170772 19171175 -66817759 + MSTB1 LTR MaLR 1 430 -2 2370 66 3 20 chr18 19171410 19171711 -66817223 - AluY SINE Alu -14 297 2 1999 114 3 56 chr18 19171792 19172116 -66816818 + AluSx SINE Alu 1 307 -5 1520 180 46 26 chr18 19172672 19172977 -66815957 + AluJo SINE Alu 2 312 0 21 0 0 0 chr18 19173571 19173592 -66815342 + AT_rich Low_complexity Low_complexity 1 21 0 2093 112 7 3 chr18 19173595 19173891 -66815043 + AluSx SINE Alu 2 298 -14 1428 194 19 29 chr18 19174167 19174481 -66814453 - AluSx SINE Alu -1 311 1 26 0 0 0 chr18 19174482 19174508 -66814426 + AT_rich Low_complexity Low_complexity 1 26 0 651 242 0 30 chr18 19175316 19175448 -66813486 + FLAM_A SINE Alu 1 128 -5 390 171 86 19 chr18 19175524 19175629 -66813305 + MER33 DNA MER1_type 7 118 -206 2357 95 0 0 chr18 19175636 19175932 -66813002 + AluSx SINE Alu 1 296 -16 635 153 42 0 chr18 19175936 19176054 -66812880 + MER33 DNA MER1_type 202 324 0 2025 106 0 27 chr18 19176330 19176478 -66812456 + AluSc SINE Alu 1 138 -171 1842 105 8 0 chr18 19176478 19176726 -66812208 + AluSq SINE Alu 1 250 -63 2025 106 0 27 chr18 19176726 19176878 -66812056 + AluSc SINE Alu 138 293 -16 253 314 128 0 chr18 19176920 19177022 -66811912 + L2 LINE L2 3195 3309 -4 1936 162 0 3 chr18 19177117 19177413 -66811521 - AluJo SINE Alu -17 295 1 2323 72 7 0 chr18 19177711 19178004 -66810930 + AluY SINE Alu 1 295 -16 2091 119 0 10 chr18 19178209 19178503 -66810431 - AluSx SINE Alu -20 292 2 265 287 157 9 chr18 19179159 19179267 -66809667 + MIR SINE MIR 19 142 -66 2262 102 3 0 chr18 19179697 19179991 -66808943 + AluSp SINE Alu 1 295 -18 21 82 0 0 chr18 19182115 19182164 -66806770 + AT_rich Low_complexity Low_complexity 1 49 0 1710 238 155 81 chr18 19183143 19183243 -66805691 + HAL1 LINE L1 7 98 -2409 1368 236 24 3 chr18 19183243 19183540 -66805394 + AluJo SINE Alu 3 305 -7 1710 238 155 81 chr18 19183540 19183766 -66805168 + HAL1 LINE L1 98 306 -2201 2398 84 0 3 chr18 19183766 19184064 -66804870 + AluSg SINE Alu 1 297 -13 1710 238 155 81 chr18 19184064 19184086 -66804848 + HAL1 LINE L1 306 325 -2182 2237 115 0 19 chr18 19184086 19184399 -66804535 + AluSq SINE Alu 1 307 -6 2376 66 0 3 chr18 19184404 19184692 -66804242 + AluY SINE Alu 14 300 -11 1710 238 155 81 chr18 19184692 19185582 -66803352 + HAL1 LINE L1 328 1345 -1162 648 214 23 8 chr18 19185588 19185719 -66803215 + FLAM_A SINE Alu 1 133 0 1137 147 0 0 chr18 19185721 19185877 -66803057 - AluSg/x SINE Alu -22 290 135 2033 126 3 7 chr18 19185877 19186171 -66802763 - AluSg SINE Alu -15 295 3 1864 145 0 0 chr18 19186555 19186844 -66802090 - AluSx SINE Alu -23 289 1 220 330 0 0 chr18 19186878 19186946 -66801988 - MIR SINE MIR -86 122 55 2493 64 0 0 chr18 19188192 19188489 -66800445 - AluY SINE Alu -14 297 1 2299 93 0 19 chr18 19189715 19190027 -66798907 - AluSq SINE Alu -7 306 1 277 100 0 0 chr18 19190122 19190162 -66798772 + Alu SINE Alu 1 40 -263 1605 101 9 0 chr18 19190164 19190381 -66798553 + AluSg/x SINE Alu 78 296 -16 2212 114 13 0 chr18 19190567 19190866 -66798068 - AluSx SINE Alu -9 303 1 207 0 0 0 chr18 19191895 19191918 -66797016 + (A)n Simple_repeat Simple_repeat 1 23 0 2308 105 0 3 chr18 19192002 19192308 -66796626 + AluSx SINE Alu 1 305 -7 1870 208 128 4 chr18 19192545 19193021 -66795913 + L1ME3A LINE L1 5584 6118 -52 366 23 0 0 chr18 19193063 19193082 -66795852 + (CA)n Simple_repeat Simple_repeat 1 62 0 366 23 0 0 chr18 19193082 19193125 -66795809 + (CA)n Simple_repeat Simple_repeat 2 44 0 332 314 57 16 chr18 19193792 19193916 -66795018 - L2 LINE L2 -6 3266 3138 1762 132 129 6 chr18 19194115 19194448 -66794486 + L1M4 LINE L1 5449 5822 -362 1937 94 0 0 chr18 19194453 19194697 -66794237 + AluSc SINE Alu 1 244 -65 1111 157 30 0 chr18 19194715 19194913 -66794021 + L1PA14 LINE L1 5954 6157 -4 303 282 39 90 chr18 19195209 19195443 -66793491 - MLT1K LTR MaLR -2 586 365 2083 115 3 23 chr18 19195800 19196105 -66792829 - AluSc SINE Alu -10 299 1 700 179 0 37 chr18 19196117 19196251 -66792683 - FLAM_A SINE Alu 0 142 14 830 189 21 7 chr18 19196359 19196502 -66792432 + FRAM SINE Alu 1 145 -31 195 100 0 0 chr18 19196502 19196532 -66792402 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 263 294 54 0 chr18 19196824 19196916 -66792018 + MER5A DNA MER1_type 9 105 -84 2093 129 0 3 chr18 19196936 19197251 -66791683 + AluSq SINE Alu 1 314 0 2258 81 0 78 chr18 19197353 19197688 -66791246 - AluSc SINE Alu 0 309 1 237 284 105 86 chr18 19197757 19197906 -66791028 - L2 LINE L2 -1105 2209 2051 1707 160 3 26 chr18 19197906 19198213 -66790721 + AluJb SINE Alu 1 300 -12 237 284 105 86 chr18 19198213 19198320 -66790614 - L2 LINE L2 -1263 2051 1948 2331 39 36 4 chr18 19198336 19198610 -66790324 + AluY SINE Alu 2 285 -22 294 29 0 0 chr18 19198610 19198645 -66790289 + (CATA)n Simple_repeat Simple_repeat 2 36 0 1168 127 0 0 chr18 19198655 19198820 -66790114 + AluSg/x SINE Alu 132 296 -16 2486 75 0 0 chr18 19198916 19199221 -66789713 - AluSc SINE Alu -4 305 1 2150 69 0 7 chr18 19199393 19199670 -66789264 - AluSq SINE Alu -5 308 34 786 134 0 22 chr18 19200431 19200565 -66788369 - FLAM_C SINE Alu -2 131 1 213 302 151 0 chr18 19200954 19201060 -66787874 - L2 LINE L2 -15 3257 3136 2468 76 0 0 chr18 19201137 19201440 -66787494 + AluSg SINE Alu 1 303 -7 2101 111 21 0 chr18 19201552 19201840 -66787094 + AluSx SINE Alu 1 294 -18 216 331 22 59 chr18 19202110 19202246 -66786688 + L2 LINE L2 2397 2527 -787 1790 248 81 36 chr18 19202531 19202895 -66786039 - L1ME2 LINE L1 -10 6154 5808 2439 87 0 7 chr18 19202895 19203205 -66785729 + AluSx SINE Alu 1 308 -4 1790 248 81 36 chr18 19203205 19203535 -66785399 - L1ME2 LINE L1 -356 5808 5429 2525 69 0 0 chr18 19203541 19203846 -66785088 - AluY SINE Alu -6 305 1 348 238 129 0 chr18 19203848 19203949 -66784985 - L1ME2 LINE L1 -857 5289 5176 2155 90 8 0 chr18 19203951 19204217 -66784717 - AluSq SINE Alu -45 268 1 2170 105 3 10 chr18 19204251 19204545 -66784389 - AluSc SINE Alu -17 292 1 661 203 51 6 chr18 19204573 19204731 -66784203 - L1ME2 LINE L1 -1141 5005 4841 1250 93 0 55 chr18 19204732 19204914 -66784020 + AluSq SINE Alu 1 172 -141 1727 126 91 23 chr18 19205280 19205543 -66783391 + AluSx SINE Alu 1 281 -31 956 142 0 68 chr18 19205700 19205862 -66783072 + AluJo SINE Alu 1 151 -161 2122 123 7 7 chr18 19206738 19207040 -66781894 - AluSx SINE Alu -9 303 2 2189 96 16 16 chr18 19207062 19207365 -66781569 + AluSx SINE Alu 1 303 -9 1497 167 3 52 chr18 19207365 19207511 -66781423 - AluJo SINE Alu -32 280 153 2229 112 0 7 chr18 19207511 19207814 -66781120 - AluSg1 SINE Alu -8 301 1 1497 167 3 52 chr18 19207814 19207955 -66780979 - AluJo SINE Alu -159 153 7 226 207 168 98 chr18 19208341 19208442 -66780492 + L1MC/D LINE L1 5288 5381 -2427 2362 74 0 17 chr18 19208442 19208738 -66780196 + AluY SINE Alu 1 291 -20 226 207 168 98 chr18 19208738 19208839 -66780095 + L1MC/D LINE L1 5381 5504 -2304 301 228 87 0 chr18 19208853 19208945 -66779989 + L1MC/D LINE L1 5710 5809 -1999 1007 164 0 18 chr18 19208957 19209128 -66779806 - AluSg/x SINE Alu -11 299 132 2213 105 6 19 chr18 19209128 19209441 -66779493 - AluSx SINE Alu -3 309 1 2451 69 3 7 chr18 19209694 19210000 -66778934 - AluY SINE Alu -6 305 1 1101 140 12 0 chr18 19210490 19210654 -66778280 - AluSg/x SINE Alu -13 297 132 1701 109 0 29 chr18 19210655 19210894 -66778040 - AluSg SINE Alu -21 289 58 2348 76 14 0 chr18 19211661 19211949 -66776985 + AluSg SINE Alu 3 294 -16 2159 119 3 0 chr18 19211970 19212263 -66776671 + AluSx SINE Alu 1 294 -18 1492 176 64 17 chr18 19212358 19212654 -66776280 + MER2 DNA MER2_type 36 345 0 2239 117 3 0 chr18 19212877 19213176 -66775758 - AluSq SINE Alu -13 300 1 2284 73 3 0 chr18 19213182 19213469 -66775465 - AluY SINE Alu -23 288 1 2035 148 3 7 chr18 19213671 19213981 -66774953 + AluSx SINE Alu 1 309 -3 2124 119 10 0 chr18 19214069 19214362 -66774572 + AluSg SINE Alu 1 296 -14 594 212 14 34 chr18 19214362 19214508 -66774426 - FRAM SINE Alu -8 168 26 23 78 0 0 chr18 19214508 19214559 -66774375 + AT_rich Low_complexity Low_complexity 1 51 0 1543 76 100 5 chr18 19214567 19214777 -66774157 + AluSq SINE Alu 1 230 -83 329 196 0 0 chr18 19214794 19214845 -66774089 - FRAM/FAM SINE Alu -89 77 27 668 222 25 0 chr18 19214856 19215018 -66773916 - L1MB8 LINE L1 -12 6166 6001 2091 120 3 0 chr18 19215502 19215793 -66773141 + AluSx SINE Alu 3 294 -18 257 246 58 0 chr18 19215831 19215900 -66773034 - MER112 DNA MER1_type -98 162 90 2217 89 0 7 chr18 19215903 19216185 -66772749 + AluSg SINE Alu 1 280 -30 188 33 0 33 chr18 19216251 19216281 -66772653 + (CACCC)n Simple_repeat Simple_repeat 3 31 0 290 314 57 16 chr18 19216496 19216620 -66772314 - L2 LINE L2 -6 3266 3138 2926 156 104 31 chr18 19216819 19217157 -66771777 + L1MB7 LINE L1 5449 5761 -423 2419 77 0 3 chr18 19217157 19217456 -66771478 + AluSc SINE Alu 1 298 -11 2926 156 104 31 chr18 19217456 19217751 -66771183 + L1MB7 LINE L1 5761 6128 -56 891 168 0 48 chr18 19217751 19217918 -66771016 - FAM SINE Alu -19 166 8 343 125 0 0 chr18 19217928 19217984 -66770950 + L1MB8 LINE L1 6112 6167 -11 2249 105 0 13 chr18 19217991 19218296 -66770638 + AluSg SINE Alu 1 301 -9 2586 33 7 3 chr18 19218306 19218607 -66770327 + AluY SINE Alu 1 302 -9 24 53 0 0 chr18 19218796 19218834 -66770100 + AT_rich Low_complexity Low_complexity 1 38 0 716 268 130 43 chr18 19219034 19219404 -66769530 + MLT1J LTR MaLR 110 511 0 931 143 0 0 chr18 19220859 19220992 -66767942 + FLAM_C SINE Alu 1 133 0 479 113 35 43 chr18 19221002 19221143 -66767791 + GA-rich Low_complexity Low_complexity 3 142 0 2287 103 0 0 chr18 19221143 19221433 -66767501 + AluSc SINE Alu 1 290 -19 2260 96 0 0 chr18 19221435 19221728 -66767206 + AluSg SINE Alu 15 307 -3 2030 151 3 6 chr18 19221937 19222249 -66766685 - AluSx SINE Alu -1 311 1 2284 73 3 0 chr18 19222451 19222738 -66766196 + AluY SINE Alu 1 288 -23 2201 121 3 0 chr18 19222744 19223042 -66765892 + AluSq SINE Alu 1 299 -14 1492 176 64 17 chr18 19223266 19223562 -66765372 - MER2 DNA MER2_type 0 345 36 2159 119 3 0 chr18 19223657 19223950 -66764984 - AluSx SINE Alu -18 294 1 1776 151 21 3 chr18 19223971 19224262 -66764672 - AluSx SINE Alu -16 296 1 605 249 98 25 chr18 19224934 19225135 -66763799 + MLT1F LTR MaLR 54 265 -290 754 240 44 10 chr18 19225322 19225526 -66763408 + L1PB1 LINE L1 6 216 -6647 * 9646 106 52 12 chr18 19225503 19226933 -66762001 + L1PB1 LINE L1 1392 2887 -3976 2330 75 0 3 chr18 19226933 19227225 -66761709 + AluY SINE Alu 1 291 -20 9646 106 52 12 chr18 19227225 19227314 -66761620 + L1PB1 LINE L1 2887 2971 -3892 6488 128 13 4 chr18 19227317 19228760 -66760174 + L1PB1 LINE L1 5406 6864 -3 642 224 106 32 chr18 19228808 19229054 -66759880 + MLT1F LTR MaLR 278 541 -1 1287 190 56 21 chr18 19229142 19229282 -66759652 + AluJo SINE Alu 1 135 -177 2200 91 45 0 chr18 19229282 19229568 -66759366 + AluSp SINE Alu 1 299 -14 1287 190 56 21 chr18 19229568 19229711 -66759223 + AluJo SINE Alu 135 294 -18 23 0 0 0 chr18 19229737 19229760 -66759174 + AT_rich Low_complexity Low_complexity 1 23 0 1939 126 0 40 chr18 19229819 19230120 -66758814 - AluSg SINE Alu -21 289 1 1039 232 129 68 chr18 19230385 19231028 -66757906 + L1MC5 LINE L1 6972 7653 -308 1770 152 0 52 chr18 19231030 19231339 -66757595 + AluJo SINE Alu 1 293 -19 253 189 126 45 chr18 19231347 19231458 -66757476 + L1MC5 LINE L1 7791 7910 -51 315 0 0 0 chr18 19231523 19231558 -66757376 + (T)n Simple_repeat Simple_repeat 1 35 0 237 301 7 49 chr18 19231720 19231863 -66757071 + AluSp/q SINE Alu 163 299 -4 674 190 88 74 chr18 19231867 19232083 -66756851 - AluJo SINE Alu -87 225 7 714 189 8 0 chr18 19232259 19232391 -66756543 + AluJo/FLAM SINE Alu 1 133 -169 319 89 67 0 chr18 19232394 19232439 -66756495 - AluSc SINE Alu -33 266 219 1394 112 0 5 chr18 19232439 19232626 -66756308 - AluSg SINE Alu -124 186 1 243 0 0 0 chr18 19232627 19232654 -66756280 + (T)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr18 19232672 19232695 -66756239 + GC_rich Low_complexity Low_complexity 1 23 0 1569 98 13 34 chr18 19232818 19233053 -66755881 - AluSx SINE Alu -82 230 1 401 217 0 0 chr18 19233054 19233123 -66755811 + AluJ/FRAM SINE Alu 218 286 -16 23 0 0 0 chr18 19234040 19234063 -66754871 + AT_rich Low_complexity Low_complexity 1 23 0 1611 127 5 0 chr18 19234186 19234406 -66754528 - AluSg/x SINE Alu -9 301 81 2161 114 33 0 chr18 19234459 19234758 -66754176 + AluSx SINE Alu 1 309 -3 2115 99 4 0 chr18 19234776 19235048 -66753886 + AluSx SINE Alu 1 273 -39 1166 144 0 12 chr18 19235078 19235245 -66753689 - FRAM SINE Alu -16 160 1 220 149 106 0 chr18 19236139 19236186 -66752748 + L2 LINE L2 3254 3305 -8 1910 140 3 36 chr18 19236243 19236551 -66752383 - AluJb SINE Alu -14 298 1 630 47 24 0 chr18 19236691 19236776 -66752158 + L1MA3 LINE L1 6219 6305 0 1923 159 6 16 chr18 19236819 19237133 -66751801 + AluJb SINE Alu 2 312 0 332 241 82 19 chr18 19237577 19237735 -66751199 + Charlie7 DNA MER1_type 2440 2607 -5 2441 67 0 10 chr18 19237740 19238040 -66750894 - AluSc SINE Alu -12 297 1 2018 129 23 3 chr18 19238562 19238864 -66750070 - AluSx SINE Alu -4 308 1 1169 155 24 84 chr18 19238864 19239115 -66749819 - AluJo SINE Alu -7 305 70 277 188 0 31 chr18 19239115 19239179 -66749755 - MER5B DNA MER1_type -41 137 76 458 249 80 34 chr18 19240014 19240251 -66748683 + L1MC5 LINE L1 7474 7721 -240 1967 127 18 0 chr18 19240257 19240533 -66748401 + AluSg SINE Alu 1 281 -29 2306 99 3 0 chr18 19240580 19240873 -66748061 - AluSp SINE Alu -19 294 1 2111 134 0 3 chr18 19240873 19241171 -66747763 - AluSx SINE Alu -15 297 1 984 124 0 15 chr18 19241171 19241308 -66747626 - AluSq/x SINE Alu -178 135 1 282 239 128 43 chr18 19241309 19241426 -66747508 + L1MC5 LINE L1 7708 7834 -127 26 0 0 0 chr18 19242090 19242116 -66746818 + AT_rich Low_complexity Low_complexity 1 26 0 198 0 0 0 chr18 19242551 19242573 -66746361 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 1537 190 16 33 chr18 19243529 19243834 -66745100 - AluJb SINE Alu -12 300 1 2190 118 3 0 chr18 19243859 19244146 -66744788 - AluSq SINE Alu -25 288 1 1543 165 12 4 chr18 19244154 19244403 -66744531 - AluJo SINE Alu -23 289 39 2325 88 14 0 chr18 19244436 19244733 -66744201 + AluY SINE Alu 1 301 -10 1897 132 29 32 chr18 19244924 19245095 -66743839 - AluSx SINE Alu -3 309 138 2330 91 3 0 chr18 19245095 19245393 -66743541 - AluSg SINE Alu -11 299 1 1897 132 29 32 chr18 19245393 19245531 -66743403 - AluSx SINE Alu -174 138 1 1271 70 6 0 chr18 19245979 19246136 -66742798 - AluY SINE Alu -15 296 139 2494 72 13 0 chr18 19246136 19246442 -66742492 - AluSp SINE Alu -3 310 1 298 256 53 38 chr18 19246580 19246713 -66742221 - MIR SINE MIR -59 203 69 2261 112 3 0 chr18 19246820 19247132 -66741802 + AluSq SINE Alu 1 313 0 362 262 131 0 chr18 19247401 19247523 -66741411 - MIR3 SINE MIR -6 202 65 944 190 101 45 chr18 19247845 19248113 -66740821 + AluJo SINE Alu 4 286 -16 1342 291 59 4 chr18 19248762 19249219 -66739715 - LTR16C LTR ERVL -9 482 1 2021 152 3 0 chr18 19249634 19249930 -66739004 + AluSx SINE Alu 1 297 -15 984 126 0 0 chr18 19250711 19250838 -66738096 - FLAM_C SINE Alu -16 127 1 631 204 5 119 chr18 19252074 19252206 -66736728 + MER5B DNA MER1_type 1 146 -32 2322 69 7 7 chr18 19252206 19252495 -66736439 - AluSp SINE Alu -24 289 1 2159 126 10 0 chr18 19252497 19252806 -66736128 - AluSx SINE Alu 0 312 1 631 204 5 119 chr18 19252806 19252871 -66736063 + MER5B DNA MER1_type 147 178 0 2171 118 0 31 chr18 19253128 19253449 -66735485 - AluJb SINE Alu -1 311 1 204 286 34 88 chr18 19254016 19254163 -66734771 + MIR3 SINE MIR 11 149 -59 2326 102 3 0 chr18 19254164 19254468 -66734466 - AluY SINE Alu -6 305 1 23 0 0 0 chr18 19254685 19254708 -66734226 + AT_rich Low_complexity Low_complexity 1 23 0 442 149 0 0 chr18 19254716 19254783 -66734151 + AluJ/FLAM SINE Alu 5 71 -241 636 100 0 0 chr18 19254783 19254873 -66734061 + L1MA8 LINE L1 6029 6118 -173 922 184 34 58 chr18 19254873 19255079 -66733855 - MLT1A2 LTR MaLR -173 201 1 681 92 0 0 chr18 19255188 19255286 -66733648 + L1MA8 LINE L1 6175 6272 -19 2160 121 3 0 chr18 19255303 19255592 -66733342 - AluSx SINE Alu -22 290 1 2541 146 121 37 chr18 19255797 19256104 -66732830 - L1MB8 LINE L1 -1 6177 5897 2225 75 0 46 chr18 19256104 19256409 -66732525 - AluY SINE Alu -20 291 1 2541 146 121 37 chr18 19256409 19256555 -66732379 - L1MB8 LINE L1 -281 5897 5765 2094 84 70 14 chr18 19256555 19256866 -66732068 - AluSc SINE Alu 0 309 1 1893 145 24 7 chr18 19256868 19257158 -66731776 - AluJo SINE Alu -17 295 1 2541 146 121 37 chr18 19257158 19257269 -66731665 - L1MB8 LINE L1 -413 5765 5561 236 135 0 0 chr18 19257399 19257436 -66731498 - L1MB5 LINE L1 -209 5965 5929 46 16 0 16 chr18 19258406 19258443 -66730491 + AT_rich Low_complexity Low_complexity 1 38 -25 2241 102 7 0 chr18 19258443 19258728 -66730206 - AluSg SINE Alu -23 287 1 46 16 0 16 chr18 19258728 19258754 -66730180 + AT_rich Low_complexity Low_complexity 38 63 0 901 130 0 0 chr18 19258754 19258877 -66730057 - AluSq/x SINE Alu -190 123 1 2146 142 0 7 chr18 19258909 19259219 -66729715 - AluSx SINE Alu -4 308 1 249 262 101 54 chr18 19259220 19259388 -66729546 - MIR SINE MIR -60 202 27 261 0 0 0 chr18 19259756 19259785 -66729149 + (TG)n Simple_repeat Simple_repeat 2 30 0 813 138 0 0 chr18 19259815 19259931 -66729003 - AluJb SINE Alu -196 116 1 244 312 91 56 chr18 19259959 19260529 -66728405 + L2 LINE L2 2150 2739 -575 397 276 122 0 chr18 19260626 19260749 -66728185 + MIR SINE MIR 5 142 -120 1664 140 48 48 chr18 19260758 19261050 -66727884 + AluJo SINE Alu 1 292 -20 212 331 29 37 chr18 19261425 19261561 -66727373 + L2 LINE L2 3138 3272 0 42 20 0 0 chr18 19262560 19262609 -66726325 + AT_rich Low_complexity Low_complexity 1 49 0 2478 79 0 16 chr18 19263208 19263526 -66725408 - AluSq SINE Alu 0 313 1 215 250 26 26 chr18 19263811 19263887 -66725047 + MIR SINE MIR 185 260 -2 1856 136 3 52 chr18 19264437 19264600 -66724334 - AluJb SINE Alu -18 294 151 2190 136 0 0 chr18 19264600 19264901 -66724033 - AluSx SINE Alu -11 301 1 1856 136 3 52 chr18 19264901 19265046 -66723888 - AluJb SINE Alu -161 151 1 1847 154 31 3 chr18 19265821 19266113 -66722821 - AluJo SINE Alu -12 300 1 2373 80 0 10 chr18 19266115 19266414 -66722520 - AluY SINE Alu -15 296 1 1204 159 33 9 chr18 19266706 19266920 -66722014 - MER20 DNA MER1_type 0 219 1 547 167 59 0 chr18 19266959 19267061 -66721873 + AluJb SINE Alu 198 305 -7 279 104 26 117 chr18 19267291 19267368 -66721566 - MIR SINE MIR 0 262 193 187 229 184 46 chr18 19267382 19267491 -66721443 - L2 LINE L2 0 3313 3190 2055 242 64 76 chr18 19267898 19268171 -66720763 + L1ME LINE L1 141 416 -5799 2330 111 3 0 chr18 19268171 19268478 -66720456 + AluSq SINE Alu 1 308 -5 2055 242 64 76 chr18 19268478 19269157 -66719777 + L1ME LINE L1 416 1073 -5142 1336 230 115 33 chr18 19269188 19269227 -66719707 + L1ME LINE L1 2192 2226 -3989 2262 99 7 0 chr18 19269227 19269521 -66719413 + AluSx SINE Alu 5 300 -12 1336 230 115 33 chr18 19269521 19269616 -66719318 + L1ME LINE L1 2226 2312 -3903 2345 108 0 3 chr18 19269616 19269922 -66719012 + AluSq SINE Alu 1 305 -8 1336 230 115 33 chr18 19269922 19270352 -66718582 + L1ME LINE L1 2312 2765 -3450 2306 99 7 0 chr18 19270861 19271153 -66717781 - AluSq SINE Alu -19 294 1 226 348 86 37 chr18 19271158 19271345 -66717589 + MIR SINE MIR 53 248 -14 507 311 111 17 chr18 19272113 19272348 -66716586 - MIR SINE MIR -4 258 2 2026 110 43 17 chr18 19272999 19273300 -66715634 - AluSx SINE Alu -3 309 1 1000 217 115 58 chr18 19273832 19273938 -66714996 + MLT1J LTR MaLR 2 100 -411 2275 95 17 7 chr18 19273938 19274233 -66714701 - AluSq SINE Alu -15 298 1 1000 217 115 58 chr18 19274233 19274430 -66714504 + MLT1J LTR MaLR 100 323 -188 374 67 133 0 chr18 19274430 19274490 -66714444 - MADE1 DNA Mariner 0 80 13 435 19 0 0 chr18 19274520 19274572 -66714362 + MADE1 DNA Mariner 29 80 0 * 521 203 120 38 chr18 19274572 19274722 -66714212 + MLT1J LTR MaLR 346 508 -3 29 0 0 0 chr18 19274931 19274960 -66713974 + AT_rich Low_complexity Low_complexity 1 29 0 2387 92 0 19 chr18 19275038 19275352 -66713582 - AluY SINE Alu -3 308 1 810 166 0 29 chr18 19275632 19275771 -66713163 - AluJo SINE Alu -176 136 2 2229 111 3 0 chr18 19275978 19276276 -66712658 - AluSg SINE Alu -11 299 1 2146 116 0 3 chr18 19276300 19276584 -66712350 - AluSx SINE Alu -29 283 1 2288 97 0 3 chr18 19277090 19277390 -66711544 - AluSx SINE Alu -13 299 1 1871 125 0 96 chr18 19277449 19277784 -66711150 - AluSx SINE Alu -9 303 1 1754 157 77 4 chr18 19277843 19278117 -66710817 - AluSx SINE Alu -18 294 1 201 337 92 0 chr18 19278150 19278248 -66710686 - MIR SINE MIR -128 134 28 755 181 114 0 chr18 19278429 19278578 -66710356 + MLT1H LTR MaLR 61 226 -323 1983 114 18 7 chr18 19278600 19278881 -66710053 - AluSq SINE Alu -29 284 1 2238 99 0 7 chr18 19278978 19279293 -66709641 - AluSg SINE Alu 0 313 1 2369 101 0 3 chr18 19279297 19279603 -66709331 - AluSq SINE Alu -8 305 1 198 0 0 0 chr18 19279731 19279753 -66709181 + (A)n Simple_repeat Simple_repeat 1 22 0 526 181 0 0 chr18 19279789 19279883 -66709051 + AluJ/FRAM SINE Alu 216 309 -3 1755 164 40 3 chr18 19280108 19280407 -66708527 - AluJb SINE Alu -2 310 1 1653 61 28 5 chr18 19282877 19283090 -66705844 - AluSq SINE Alu -95 218 1 309 218 139 10 chr18 19283092 19283193 -66705741 - L1M4 LINE L1 -857 5289 5176 2155 90 8 0 chr18 19283195 19283461 -66705473 - AluSq SINE Alu -45 268 1 2187 105 3 10 chr18 19283495 19283791 -66705143 - AluSc SINE Alu -15 294 1 661 203 51 6 chr18 19283819 19283977 -66704957 - L1M4 LINE L1 -1141 5005 4841 1250 93 0 55 chr18 19283978 19284160 -66704774 + AluSq SINE Alu 1 172 -141 1727 126 91 23 chr18 19284526 19284789 -66704145 + AluSx SINE Alu 1 281 -31 967 142 0 68 chr18 19284946 19285108 -66703826 + AluJo SINE Alu 1 151 -161 1470 140 9 9 chr18 19285984 19286213 -66702721 - AluSg/x SINE Alu -9 301 73 434 241 22 29 chr18 19286301 19286438 -66702496 - AluY SINE Alu -33 278 143 458 249 80 34 chr18 19287266 19287503 -66701431 + L1MC5 LINE L1 7474 7721 -240 1955 143 17 0 chr18 19287509 19287809 -66701125 + AluSg SINE Alu 1 305 -5 2278 102 3 0 chr18 19287832 19288125 -66700809 - AluSp SINE Alu -19 294 1 2111 134 0 3 chr18 19288125 19288423 -66700511 - AluSx SINE Alu -15 297 1 984 124 0 15 chr18 19288423 19288560 -66700374 - AluSq/x SINE Alu -177 135 1 282 239 128 43 chr18 19288561 19288678 -66700256 + L1MC5 LINE L1 7708 7834 -127 26 0 0 0 chr18 19289342 19289368 -66699566 + AT_rich Low_complexity Low_complexity 1 26 0 198 0 0 0 chr18 19289803 19289825 -66699109 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 1537 190 16 33 chr18 19290781 19291086 -66697848 - AluJb SINE Alu -12 300 1 2190 118 3 0 chr18 19291111 19291398 -66697536 - AluSq SINE Alu -25 288 1 1543 165 12 4 chr18 19291406 19291655 -66697279 - AluJo SINE Alu -23 289 39 2274 94 14 0 chr18 19291688 19291985 -66696949 + AluY SINE Alu 1 301 -10 1897 132 29 32 chr18 19292176 19292347 -66696587 - AluSx SINE Alu -3 309 138 2330 91 3 0 chr18 19292347 19292645 -66696289 - AluSg SINE Alu -11 299 1 1897 132 29 32 chr18 19292645 19292783 -66696151 - AluSx SINE Alu -174 138 1 2398 76 0 16 chr18 19293231 19293534 -66695400 - AluSq SINE Alu -15 298 1 215 250 26 26 chr18 19293819 19293895 -66695039 + MIR SINE MIR 185 260 -2 1856 136 3 52 chr18 19294445 19294608 -66694326 - AluJb SINE Alu -18 294 151 2190 136 0 0 chr18 19294608 19294909 -66694025 - AluSx SINE Alu -11 301 1 1856 136 3 52 chr18 19294909 19295054 -66693880 - AluJb SINE Alu -161 151 1 1847 154 31 3 chr18 19295829 19296121 -66692813 - AluJo SINE Alu -12 300 1 2373 80 0 10 chr18 19296123 19296422 -66692512 - AluY SINE Alu -15 296 1 1072 147 30 86 chr18 19296714 19296946 -66691988 - MER20 DNA MER1_type 0 219 1 547 167 59 0 chr18 19296985 19297087 -66691847 + AluJb SINE Alu 198 305 -7 279 104 26 117 chr18 19297317 19297394 -66691540 - MIR SINE MIR 0 262 193 187 229 184 46 chr18 19297408 19297517 -66691417 - L2 LINE L2 0 3313 3190 593 259 67 78 chr18 19297924 19298194 -66690740 + L1ME LINE L1 6 272 -5798 2273 113 3 0 chr18 19298197 19298497 -66690437 + AluSq SINE Alu 1 301 -12 1410 232 145 73 chr18 19298537 19299387 -66689547 + HAL1 LINE L1 435 1345 -1162 602 214 23 8 chr18 19299393 19299524 -66689410 + FLAM_A SINE Alu 1 133 0 1145 147 0 0 chr18 19299526 19299682 -66689252 - AluSg/x SINE Alu -22 290 135 2080 137 0 10 chr18 19299682 19299982 -66688952 - AluSx SINE Alu -15 297 1 810 236 84 26 chr18 19300062 19300371 -66688563 + HAL1 LINE L1 1420 1746 -761 2143 103 4 4 chr18 19300491 19300772 -66688162 + AluSp SINE Alu 1 281 -32 2237 78 0 33 chr18 19300813 19301120 -66687814 + AluY SINE Alu 1 297 -14 1171 144 5 0 chr18 19301235 19301423 -66687511 + AluSg/x SINE Alu 121 309 -1 595 202 9 0 chr18 19301535 19301644 -66687290 + FLAM_A SINE Alu 15 124 -18 1102 174 32 50 chr18 19301655 19301874 -66687060 + AluJb SINE Alu 75 289 -23 2076 129 14 3 chr18 19302015 19302310 -66686624 - AluSq SINE Alu -15 298 1 339 170 11 43 chr18 19302487 19302581 -66686353 + L1ME1 LINE L1 5404 5494 -2314 2017 110 35 3 chr18 19302693 19302983 -66685951 + AluSx SINE Alu 2 300 -12 503 157 61 17 chr18 19302985 19303100 -66685834 + L1ME1 LINE L1 5815 5934 -230 2119 133 0 0 chr18 19303145 19303445 -66685489 + AluSx SINE Alu 1 300 -12 799 244 99 23 chr18 19303445 19303666 -66685268 + L1ME1 LINE L1 5924 6161 -5 335 227 32 81 chr18 19303693 19303878 -66685056 + L1MC4a LINE L1 5843 6018 -1790 1533 159 10 57 chr18 19304309 19304623 -66684311 + AluJb SINE Alu 1 299 -13 2069 84 11 7 chr18 19304669 19304942 -66683992 + AluSg1 SINE Alu 23 296 -13 970 205 30 4 chr18 19305172 19305406 -66683528 - L1M4 LINE L1 -1205 4941 4702 262 130 0 0 chr18 19305408 19305454 -66683480 - FLAM_A SINE Alu -1 132 87 1407 166 0 9 chr18 19305455 19305678 -66683256 - AluJo SINE Alu -91 221 1 3314 144 54 13 chr18 19305686 19306296 -66682638 - L1MA4 LINE L1 -4 6296 5662 3811 201 81 46 chr18 19306305 19307388 -66681546 - L1M4 LINE L1 -1767 4379 3259 1361 169 154 0 chr18 19307439 19307699 -66681235 + AluJo SINE Alu 2 301 -1 918 209 12 0 chr18 19307727 19307899 -66681035 + FAM SINE Alu 2 175 0 437 259 130 69 chr18 19307908 19308155 -66680779 + L1M4 LINE L1 4703 4964 -1182 522 55 14 0 chr18 19308155 19308228 -66680706 + MER41B LTR ERV1 481 554 -81 1541 156 102 0 chr18 19308418 19308695 -66680239 + AluJb SINE Alu 1 303 0 2326 92 10 0 chr18 19308743 19309037 -66679897 + AluSx SINE Alu 1 297 -15 2324 69 31 0 chr18 19309612 19309902 -66679032 - AluY SINE Alu -12 299 1 2190 117 3 0 chr18 19309996 19310294 -66678640 - AluSg SINE Alu -11 299 1 199 51 0 51 chr18 19310380 19310419 -66678515 + (TTTAA)n Simple_repeat Simple_repeat 4 40 0 2087 104 27 7 chr18 19310443 19310741 -66678193 + AluSc SINE Alu 1 304 -5 817 229 40 50 chr18 19310783 19311191 -66677743 + MLT1D LTR MaLR 2 499 -6 6279 64 17 60 chr18 19311436 19313370 -66675564 - SVA Other Other -518 1386 38 306 0 0 0 chr18 19313374 19313408 -66675526 + (GGGAGA)n Simple_repeat Simple_repeat 6 39 0 940 171 17 86 chr18 19313719 19313953 -66674981 - MER20 DNA MER1_type 0 219 2 1829 76 4 8 chr18 19314256 19314492 -66674442 + AluY SINE Alu 59 293 -18 2363 56 0 3 chr18 19314494 19314821 -66674113 + AluY SINE Alu 1 326 0 853 145 8 0 chr18 19314919 19315050 -66673884 + AluJb SINE Alu 1 132 -180 476 149 0 0 chr18 19315083 19315157 -66673777 + Charlie1 DNA MER1_type 2688 2761 0 21 57 0 0 chr18 19315292 19315327 -66673607 + AT_rich Low_complexity Low_complexity 1 35 0 2078 97 41 10 chr18 19315363 19315653 -66673281 + AluSx SINE Alu 1 299 -13 1425 145 186 11 chr18 19315819 19316185 -66672749 + Charlie1 DNA MER1_type 2144 2573 -188 706 172 0 0 chr18 19316206 19316322 -66672612 + FLAM_A SINE Alu 16 131 -11 880 119 108 26 chr18 19316322 19316516 -66672418 + Charlie1 DNA MER1_type 2551 2760 -1 2426 77 0 7 chr18 19317230 19317530 -66671404 + AluSx SINE Alu 1 298 -14 1772 134 17 21 chr18 19317874 19318164 -66670770 + AluJb SINE Alu 3 291 -21 2110 99 13 33 chr18 19320035 19320337 -66668597 + AluSx SINE Alu 1 296 -16 1236 147 29 93 chr18 19320566 19320729 -66668205 - AluJb SINE Alu -19 293 158 2400 70 3 7 chr18 19320729 19321027 -66667907 - AluSg SINE Alu -13 297 1 1236 147 29 93 chr18 19321027 19321176 -66667758 - AluJb SINE Alu -154 158 1 300 204 26 20 chr18 19321430 19321506 -66667428 + AluSg/x SINE Alu 120 181 -121 2204 116 10 6 chr18 19322085 19322396 -66666538 - AluSx SINE Alu 0 312 1 2077 101 66 0 chr18 19322777 19323064 -66665870 + AluSq SINE Alu 1 306 -7 1309 68 0 0 chr18 19323076 19323239 -66665695 + L1PA14 LINE L1 5995 6157 -4 473 240 39 90 chr18 19323535 19323768 -66665166 - MLT1K LTR MaLR -2 586 366 2228 105 0 10 chr18 19324611 19324915 -66664019 - AluSg SINE Alu -9 301 1 1715 208 27 27 chr18 19324973 19325322 -66663612 - LTR56 LTR ERV1 0 437 112 1517 134 82 37 chr18 19325322 19325590 -66663344 - AluJb SINE Alu -32 280 1 1715 208 27 27 chr18 19325590 19325695 -66663239 - LTR56 LTR ERV1 -325 112 9 324 274 12 0 chr18 19325744 19325828 -66663106 - L2 LINE L2 -49 3264 3180 2480 53 26 3 chr18 19325839 19326142 -66662792 - AluY SINE Alu -1 310 1 2373 88 3 0 chr18 19326147 19326442 -66662492 - AluSq SINE Alu -17 296 1 417 277 61 7 chr18 19326447 19326595 -66662339 - L2 LINE L2 0 3313 3158 471 196 78 10 chr18 19326626 19326728 -66662206 + MER3 DNA MER1_type 2 110 -99 2336 100 0 0 chr18 19326731 19327031 -66661903 + AluSg1 SINE Alu 1 300 -9 30 59 0 0 chr18 19327073 19327124 -66661810 + AT_rich Low_complexity Low_complexity 1 51 0 30 27 0 0 chr18 19327154 19327191 -66661743 + AT_rich Low_complexity Low_complexity 1 37 0 458 249 80 34 chr18 19327403 19327640 -66661294 + L1MC5 LINE L1 7474 7721 -240 2071 130 17 0 chr18 19327646 19327946 -66660988 + AluSg SINE Alu 1 305 -5 2306 99 3 0 chr18 19327970 19328263 -66660671 - AluSp SINE Alu -19 294 1 2111 134 0 3 chr18 19328263 19328561 -66660373 - AluSx SINE Alu -15 297 1 984 124 0 15 chr18 19328561 19328698 -66660236 - AluSq/x SINE Alu -178 135 1 282 239 128 43 chr18 19328699 19328816 -66660118 + L1MC5 LINE L1 7708 7834 -127 26 0 0 0 chr18 19329480 19329506 -66659428 + AT_rich Low_complexity Low_complexity 1 26 0 198 0 0 0 chr18 19329941 19329963 -66658971 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 1537 190 16 33 chr18 19330919 19331224 -66657710 - AluJb SINE Alu -12 300 1 2190 118 3 0 chr18 19331249 19331536 -66657398 - AluSq SINE Alu -25 288 1 1561 161 12 4 chr18 19331544 19331793 -66657141 - AluJo SINE Alu -23 289 39 2325 88 14 0 chr18 19331826 19332123 -66656811 + AluY SINE Alu 1 301 -10 1897 132 29 32 chr18 19332314 19332485 -66656449 - AluSx SINE Alu -3 309 138 2330 91 3 0 chr18 19332485 19332783 -66656151 - AluSg SINE Alu -11 299 1 1897 132 29 32 chr18 19332783 19332921 -66656013 - AluSx SINE Alu -174 138 1 2224 53 23 0 chr18 19333369 19333634 -66655300 - AluY SINE Alu -15 296 26 963 87 56 0 chr18 19334358 19334484 -66654450 + AluSg1 SINE Alu 1 133 -176 2355 80 17 7 chr18 19334484 19334783 -66654151 + AluY SINE Alu 1 302 -9 2181 121 0 10 chr18 19334913 19335219 -66653715 + AluSq SINE Alu 1 303 -10 2317 68 24 10 chr18 19335220 19335514 -66653420 + AluY SINE Alu 5 302 -9 373 45 0 0 chr18 19335662 19335706 -66653228 + MSTB1 LTR MaLR 1 44 -388 2046 132 7 10 chr18 19335706 19336016 -66652918 - AluSx SINE Alu -3 309 1 1502 212 45 48 chr18 19336062 19336486 -66652448 - MLT2B1 LTR ERVL 0 414 1 2171 129 0 3 chr18 19336560 19336855 -66652079 - AluSg SINE Alu -16 294 1 2241 114 0 3 chr18 19337257 19337563 -66651371 - AluSq SINE Alu -8 305 1 1735 173 25 3 chr18 19338138 19338422 -66650512 - AluJo SINE Alu -22 290 1 288 0 0 0 chr18 19338522 19338554 -66650380 + (T)n Simple_repeat Simple_repeat 1 32 0 225 0 0 0 chr18 19338577 19338602 -66650332 + (G)n Simple_repeat Simple_repeat 1 25 0 24 0 0 0 chr18 19338701 19338725 -66650209 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr18 19338811 19338839 -66650095 + GC_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr18 19338911 19338933 -66650001 + AT_rich Low_complexity Low_complexity 1 22 0 1109 104 0 30 chr18 19339123 19339287 -66649647 - AluSg/x SINE Alu 0 310 152 207 0 0 0 chr18 19339296 19339319 -66649615 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1275 226 65 19 chr18 19339360 19339728 -66649206 - L1MD3 LINE L1 0 7995 7611 289 358 34 25 chr18 19339734 19339798 -66649136 + L3 LINE CR1 1287 1349 -228 1756 174 27 0 chr18 19339798 19340091 -66648843 + AluJo SINE Alu 1 301 -11 289 358 34 25 chr18 19340091 19340230 -66648704 + L3 LINE CR1 1349 1492 -85 265 233 0 0 chr18 19340766 19340826 -66648108 + GA-rich Low_complexity Low_complexity 6 65 0 2360 155 37 0 chr18 19341097 19341478 -66647456 - MER57A LTR ERV1 -1 402 8 2211 108 0 0 chr18 19342182 19342469 -66646465 + AluSg SINE Alu 3 289 -21 275 209 14 14 chr18 19342480 19342628 -66646306 + (TA)n Simple_repeat Simple_repeat 2 149 0 1619 101 0 9 chr18 19342829 19343046 -66645888 - AluSg/x SINE Alu -11 301 87 2276 69 30 13 chr18 19343128 19343433 -66645501 - AluY SINE Alu -1 310 1 422 286 45 0 chr18 19343454 19343566 -66645368 - LTR33 LTR ERVL -315 206 90 608 225 69 19 chr18 19343664 19343824 -66645110 + AluJo SINE Alu 118 285 -27 2160 116 14 0 chr18 19343881 19344173 -66644761 + AluSx SINE Alu 3 298 -14 2569 74 0 0 chr18 19344541 19344850 -66644084 - AluY SINE Alu -2 309 1 2178 132 7 0 chr18 19345221 19345531 -66643403 - AluSx SINE Alu 0 312 1 2500 68 0 0 chr18 19345561 19345854 -66643080 - AluY SINE Alu -18 293 1 1365 160 87 42 chr18 19346090 19346402 -66642532 + MER82 DNA MER2_type 65 390 -263 343 295 23 8 chr18 19346549 19346678 -66642256 - MIR3 SINE MIR -7 201 71 201 74 0 0 chr18 19346943 19346970 -66641964 + (TCCC)n Simple_repeat Simple_repeat 3 29 0 1995 125 26 35 chr18 19346982 19347168 -66641766 - AluSg SINE Alu 0 310 127 2514 74 0 0 chr18 19347168 19347466 -66641468 - AluY SINE Alu -13 298 1 1187 158 37 0 chr18 19347466 19347592 -66641342 - AluSg SINE Alu -177 133 1 1995 125 26 35 chr18 19347466 19347592 -66641342 - AluSg SINE Alu -183 127 1 2279 52 22 0 chr18 19348316 19348587 -66640347 + AluY SINE Alu 26 302 -9 2181 121 0 10 chr18 19348717 19349023 -66639911 + AluSq SINE Alu 1 303 -10 2427 58 24 3 chr18 19349024 19349316 -66639618 + AluY SINE Alu 5 302 -9 373 45 0 0 chr18 19349464 19349508 -66639426 + MSTB1 LTR MaLR 1 44 -388 2046 132 7 10 chr18 19349508 19349818 -66639116 - AluSx SINE Alu -3 309 1 1502 212 45 48 chr18 19349864 19350288 -66638646 - MLT2B1 LTR ERVL 0 414 1 2107 139 0 3 chr18 19350362 19350657 -66638277 - AluSg SINE Alu -16 294 1 2241 114 0 3 chr18 19351059 19351365 -66637569 - AluSq SINE Alu -8 305 1 1735 173 25 3 chr18 19351940 19352224 -66636710 - AluJo SINE Alu -22 290 1 337 185 0 147 chr18 19352268 19352325 -66636609 - L1MC5 LINE L1 -527 7434 7370 2619 61 0 6 chr18 19352325 19352638 -66636296 - AluY SINE Alu 0 311 1 337 185 0 147 chr18 19352638 19352737 -66636197 - L1MC5 LINE L1 -591 7370 7301 2420 79 3 0 chr18 19352910 19353213 -66635721 - AluSp SINE Alu -9 304 1 708 238 113 21 chr18 19353225 19353465 -66635469 + MIR SINE MIR 1 262 0 735 198 15 104 chr18 19353489 19353566 -66635368 - AluJo SINE Alu -15 297 215 1650 158 0 31 chr18 19353566 19353886 -66635048 + AluJb SINE Alu 1 311 0 735 198 15 104 chr18 19353886 19354007 -66634927 - AluJo SINE Alu -97 215 114 439 141 0 14 chr18 19354085 19354156 -66634778 + MLT1A1 LTR MaLR 1 70 -295 947 127 0 8 chr18 19354156 19354290 -66634644 + FLAM_C SINE Alu 1 133 -10 785 202 39 0 chr18 19354350 19354528 -66634406 + L1MB8 LINE L1 5982 6166 -12 568 240 0 0 chr18 19354539 19354643 -66634291 + FAM SINE Alu 27 130 -55 1409 99 28 14 chr18 19354648 19354860 -66634074 + AluSg/x SINE Alu 95 309 -3 411 159 58 0 chr18 19354904 19354973 -66633961 + MLT1A1 LTR MaLR 80 152 -213 407 205 12 0 chr18 19354991 19355074 -66633860 + MLT1A1 LTR MaLR 282 365 0 2348 143 57 2 chr18 19355335 19355741 -66633193 - MSTC LTR MaLR 0 428 1 213 39 0 0 chr18 19355768 19355794 -66633140 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1325 82 0 0 chr18 19355912 19356071 -66632863 - AluSg SINE Alu -151 159 1 495 321 57 5 chr18 19356103 19356296 -66632638 - MIR SINE MIR -45 217 15 2143 117 0 0 chr18 19356718 19356999 -66631935 - AluSx SINE Alu -31 281 1 2071 138 7 0 chr18 19357309 19357607 -66631327 + AluSx SINE Alu 1 300 -12 341 319 7 7 chr18 19357954 19358092 -66630842 - L2 LINE L2 -10 3303 3166 315 98 0 0 chr18 19358158 19358199 -66630735 - MER112 DNA MER1_type -6 254 214 180 0 0 0 chr18 19358225 19358245 -66630689 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1978 110 4 15 chr18 19358245 19358518 -66630416 - AluSx SINE Alu -34 278 9 2105 135 3 0 chr18 19358938 19359234 -66629700 + AluSx SINE Alu 7 303 -9 232 293 71 40 chr18 19359381 19359480 -66629454 + MIR SINE MIR 45 146 -62 222 162 0 0 chr18 19359505 19359542 -66629392 + L2 LINE L2 3220 3256 -16 22 35 0 0 chr18 19359729 19359758 -66629176 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr18 19359913 19359946 -66628988 + AT_rich Low_complexity Low_complexity 1 33 0 2170 93 54 0 chr18 19360081 19360361 -66628573 + AluSg SINE Alu 1 295 -15 352 263 187 5 chr18 19360591 19360749 -66628185 - LTR50 LTR ERVL -183 612 484 3700 185 50 7 chr18 19360749 19361450 -66627484 - MER44D DNA MER2_type -2 603 1 352 263 187 5 chr18 19361450 19361488 -66627446 - LTR50 LTR ERVL -311 484 288 585 154 129 22 chr18 19361520 19361679 -66627255 - LTR50 LTR ERVL -587 208 26 2285 125 0 3 chr18 19361718 19362030 -66626904 + AluSq SINE Alu 1 311 -2 448 205 212 20 chr18 19362030 19362181 -66626753 + Charlie7 DNA MER1_type 2164 2343 -269 2127 130 7 0 chr18 19362209 19362516 -66626418 + AluSq SINE Alu 1 309 -4 40 83 0 0 chr18 19362823 19362871 -66626063 + AT_rich Low_complexity Low_complexity 1 48 0 367 292 73 6 chr18 19362990 19363168 -66625766 - L1ME LINE L1 -566 5600 5411 23 0 0 0 chr18 19363690 19363713 -66625221 + AT_rich Low_complexity Low_complexity 1 23 0 428 184 83 101 chr18 19363826 19363994 -66624940 + HAL1 LINE L1 1496 1660 -847 199 89 0 67 chr18 19363999 19364044 -66624890 + (GAAA)n Simple_repeat Simple_repeat 4 45 0 21 0 0 0 chr18 19364137 19364158 -66624776 + AT_rich Low_complexity Low_complexity 1 21 0 1733 141 74 7 chr18 19364163 19364447 -66624487 + AluSx SINE Alu 1 303 -9 1870 174 0 16 chr18 19364493 19364810 -66624124 - AluJb SINE Alu 0 312 1 2140 92 0 83 chr18 19364961 19365098 -66623836 + AluSx SINE Alu 1 148 -164 2397 94 0 0 chr18 19365098 19365406 -66623528 + AluY SINE Alu 1 308 -3 2140 92 0 83 chr18 19365406 19365595 -66623339 + AluSx SINE Alu 148 300 -12 2215 120 0 3 chr18 19365783 19366083 -66622851 + AluSp SINE Alu 1 299 -14 422 292 73 26 chr18 19366253 19366486 -66622448 + L1MC4a LINE L1 5669 5912 -1896 1799 164 10 29 chr18 19366683 19366994 -66621940 + AluJo SINE Alu 1 305 -7 1650 189 17 7 chr18 19366994 19367291 -66621643 + AluJb SINE Alu 1 300 -12 180 176 0 0 chr18 19367295 19367329 -66621605 + GA-rich Low_complexity Low_complexity 3 36 0 1812 94 45 0 chr18 19368686 19368958 -66619976 - AluSq SINE Alu 0 313 31 4911 132 216 34 chr18 19368958 19370049 -66618885 + pTR5 LTR ERV1 743 2032 -406 262 278 11 0 chr18 19370050 19370140 -66618794 + LTR30 LTR ERV1 552 642 -80 1513 126 0 5 chr18 19370142 19370365 -66618569 + pTR5 LTR ERV1 171 392 -2046 236 125 0 0 chr18 19370367 19370399 -66618535 - AluSq SINE Alu -271 32 1 1157 201 123 48 chr18 19370438 19370771 -66618163 - MLT1A2 LTR MaLR -4 370 13 290 296 11 0 chr18 19370858 19370946 -66617988 + MIR3 SINE MIR 91 179 -29 1963 124 7 20 chr18 19370989 19371287 -66617647 + AluSx SINE Alu 1 294 -18 199 254 16 16 chr18 19371294 19371357 -66617577 - MIR SINE MIR -109 153 91 1105 252 58 89 chr18 19371497 19371652 -66617282 - LTR67 LTR ERVL -9 548 390 2415 63 7 7 chr18 19371652 19371954 -66616980 + AluY SINE Alu 1 302 -9 1105 252 58 89 chr18 19371954 19372362 -66616572 - LTR67 LTR ERVL -167 390 2 204 308 181 15 chr18 19372391 19372524 -66616410 - L2 LINE L2 -198 3074 2920 1786 117 103 4 chr18 19372738 19373011 -66615923 - AluSx SINE Alu -12 300 1 1934 166 0 0 chr18 19373087 19373370 -66615564 + AluJo SINE Alu 3 285 -27 2316 94 17 0 chr18 19373445 19373744 -66615190 - AluSx SINE Alu -8 304 1 2132 141 3 6 chr18 19373887 19374200 -66614734 - AluSx SINE Alu 0 312 1 1949 154 7 0 chr18 19374306 19374611 -66614323 - AluJo SINE Alu -5 307 1 2314 207 74 39 chr18 19374901 19375472 -66613462 + MLT1E LTR MaLR 1 591 -2 24 0 0 0 chr18 19375560 19375584 -66613350 + AT_rich Low_complexity Low_complexity 1 24 0 1593 171 0 47 chr18 19375584 19375882 -66613052 - AluJo SINE Alu -24 288 5 29 0 0 0 chr18 19375910 19375939 -66612995 + AT_rich Low_complexity Low_complexity 1 29 0 2388 88 0 10 chr18 19375947 19376255 -66612679 + AluSg SINE Alu 1 305 -5 1118 170 0 74 chr18 19376287 19376516 -66612418 - AluSx SINE Alu -100 212 1 605 249 98 25 chr18 19377188 19377389 -66611545 + MLT1F LTR MaLR 54 265 -290 754 240 44 10 chr18 19377576 19377780 -66611154 + L1PB1 LINE L1 6 216 -6647 * 9646 106 52 12 chr18 19377757 19379187 -66609747 + L1PB1 LINE L1 1392 2887 -3976 2330 75 0 3 chr18 19379187 19379479 -66609455 + AluY SINE Alu 1 291 -20 9646 106 52 12 chr18 19379479 19379568 -66609366 + L1PB1 LINE L1 2887 2971 -3892 6488 128 13 4 chr18 19379571 19381014 -66607920 + L1PB1 LINE L1 5406 6864 -3 642 224 106 32 chr18 19381062 19381308 -66607626 + MLT1F LTR MaLR 278 541 -1 1287 190 56 21 chr18 19381396 19381536 -66607398 + AluJo SINE Alu 1 135 -177 2200 91 45 0 chr18 19381536 19381822 -66607112 + AluSp SINE Alu 1 299 -14 1287 190 56 21 chr18 19381822 19381965 -66606969 + AluJo SINE Alu 135 294 -18 23 0 0 0 chr18 19381991 19382014 -66606920 + AT_rich Low_complexity Low_complexity 1 23 0 1939 126 0 40 chr18 19382073 19382374 -66606560 - AluSg SINE Alu -21 289 1 1039 232 129 68 chr18 19382639 19383282 -66605652 + L1MC5 LINE L1 6972 7653 -308 1770 152 0 52 chr18 19383284 19383593 -66605341 + AluJo SINE Alu 1 293 -19 253 189 126 45 chr18 19383601 19383712 -66605222 + L1MC5 LINE L1 7791 7910 -51 2396 115 0 0 chr18 19383786 19384098 -66604836 - AluSx SINE Alu 0 312 1 3336 168 116 127 chr18 19384370 19384685 -66604249 - L1MC3 LINE L1 -1 7784 7467 2301 94 0 3 chr18 19384685 19384971 -66603963 - AluSg SINE Alu -25 285 1 3336 168 116 127 chr18 19384971 19384984 -66603950 - L1MC3 LINE L1 -318 7467 7455 2195 110 13 0 chr18 19384984 19385283 -66603651 - AluSq SINE Alu -7 306 4 3336 168 116 127 chr18 19385283 19385554 -66603380 - L1MC3 LINE L1 -330 7455 7183 366 158 12 73 chr18 19385554 19385636 -66603298 - MLT1F1 LTR MaLR -456 111 35 3336 168 116 127 chr18 19385636 19386141 -66602793 - L1MC3 LINE L1 -602 7183 6608 2382 83 0 0 chr18 19386141 19386431 -66602503 - AluSg SINE Alu -20 290 1 3336 168 116 127 chr18 19386431 19386488 -66602446 - L1MC3 LINE L1 -1177 6608 6552 770 137 65 0 chr18 19386497 19386621 -66602313 - FLAM_C SINE Alu -1 132 1 738 64 0 83 chr18 19386736 19386845 -66602089 + HY3 scRNA scRNA 1 100 -1 2183 115 0 26 chr18 19387040 19387345 -66601589 + AluSx SINE Alu 1 297 -15 450 0 0 0 chr18 19387345 19387395 -66601539 + (TA)n Simple_repeat Simple_repeat 2 51 0 2524 65 0 10 chr18 19387432 19387738 -66601196 + AluY SINE Alu 1 303 -8 459 92 0 0 chr18 19388370 19388435 -66600499 + (GGAA)n Simple_repeat Simple_repeat 4 68 0 751 218 6 29 chr18 19388720 19388890 -66600044 + FRAM SINE Alu 1 166 -10 953 108 0 23 chr18 19388892 19389022 -66599912 + FLAM_C SINE Alu 1 127 -16 297 280 30 20 chr18 19389192 19389292 -66599642 + MIR SINE MIR 11 111 -151 1897 120 6 79 chr18 19389737 19390054 -66598880 - AluSx SINE Alu -18 294 1 1453 172 33 69 chr18 19390082 19390385 -66598549 + AluJo SINE Alu 1 292 -20 1247 206 66 8 chr18 19390386 19390703 -66598231 + MLT1E1 LTR MaLR 259 652 -2 2292 104 0 0 chr18 19390832 19391131 -66597803 + AluSq SINE Alu 1 299 -14 1565 125 0 4 chr18 19391283 19391531 -66597403 - L1MA5 LINE L1 -2 6298 6052 293 277 184 41 chr18 19391540 19391883 -66597051 - MLT1J LTR MaLR -78 433 42 1737 141 55 102 chr18 19391884 19392124 -66596810 - MLT1A1 LTR MaLR -1 364 147 2060 132 0 0 chr18 19392124 19392411 -66596523 - AluSx SINE Alu -25 287 1 1737 141 55 102 chr18 19392411 19392552 -66596382 - MLT1A1 LTR MaLR -218 147 1 262 128 0 0 chr18 19392558 19392597 -66596337 + MLT1A2 LTR MaLR 264 302 -72 2199 107 0 3 chr18 19392907 19393197 -66595737 + AluSx SINE Alu 1 289 -23 189 204 56 74 chr18 19393220 19393274 -66595660 + L2 LINE L2 2397 2449 -865 343 374 54 51 chr18 19393275 19393868 -66595066 + L2 LINE L2 2569 3211 -61 1083 205 4 25 chr18 19393871 19394074 -66594860 - L1ME1 LINE L1 -262 5904 5705 2583 55 3 0 chr18 19394074 19394381 -66594553 + AluY SINE Alu 1 308 -3 1083 205 4 25 chr18 19394381 19394421 -66594513 - L1ME1 LINE L1 -461 5705 5666 1409 125 5 5 chr18 19394421 19394645 -66594289 - HSMAR2 DNA Mariner -3 1299 1076 2021 139 0 7 chr18 19394669 19394956 -66593978 + AluSx SINE Alu 4 288 -24 387 0 0 0 chr18 19394974 19395017 -66593917 + (CA)n Simple_repeat Simple_repeat 2 44 0 1485 172 4 26 chr18 19395033 19395301 -66593633 - AluJo SINE Alu -30 282 21 3803 130 42 15 chr18 19395329 19395930 -66593004 - HSMAR2 DNA Mariner -221 1081 465 1043 202 0 52 chr18 19395943 19396191 -66592743 - AluJo SINE Alu -77 235 1 1807 118 15 70 chr18 19396191 19396319 -66592615 - HSMAR2 DNA Mariner -832 470 337 1901 118 15 0 chr18 19396319 19396582 -66592352 - AluSp SINE Alu -3 310 44 1807 118 15 70 chr18 19396582 19396729 -66592205 - HSMAR2 DNA Mariner -965 337 213 2413 77 3 0 chr18 19396729 19397028 -66591906 - AluY SINE Alu -11 300 1 1807 118 15 70 chr18 19397028 19397081 -66591853 - HSMAR2 DNA Mariner -1089 213 159 353 115 0 16 chr18 19397084 19397145 -66591789 + (TC)n Simple_repeat Simple_repeat 1 60 0 2202 130 0 0 chr18 19397145 19397452 -66591482 - AluSx SINE Alu -5 307 1 1108 101 24 6 chr18 19397452 19397620 -66591314 - HSMAR2 DNA Mariner -1131 171 1 356 198 11 55 chr18 19397620 19397711 -66591223 - L1ME1 LINE L1 -500 5666 5580 14957 105 11 40 chr18 19397711 19401147 -66587787 + L1P3 LINE L1 3 3398 -3063 2485 84 0 0 chr18 19401149 19401491 -66587443 + AluY SINE Alu 1 342 0 4830 89 3 15 chr18 19401493 19402249 -66586685 + L1P3 LINE L1 3387 4133 -2328 466 127 0 51 chr18 19402250 19402329 -66586605 + FLAM_C SINE Alu 33 107 -36 1061 152 9 43 chr18 19402363 19402573 -66586361 + AluSc SINE Alu 107 309 0 304 305 103 52 chr18 19403196 19403429 -66585505 + L1M2 LINE L1 768 1012 -5837 324 201 45 42 chr18 19404433 19404547 -66584387 + MIR SINE MIR 19 130 -78 197 264 167 0 chr18 19404653 19404725 -66584209 - L2 LINE L2 -52 3261 3178 517 206 233 0 chr18 19405134 19405280 -66583654 + MER5A DNA MER1_type 10 189 0 2125 120 10 0 chr18 19406603 19406895 -66582039 + AluSx SINE Alu 1 295 -17 315 0 0 0 chr18 19406898 19406933 -66582001 + (TG)n Simple_repeat Simple_repeat 2 36 0 1055 152 66 33 chr18 19407126 19407337 -66581597 + MER20 DNA MER1_type 1 218 -1 295 242 41 13 chr18 19407418 19407543 -66581391 - L1ME LINE L1 -351 5770 5678 623 280 26 16 chr18 19407623 19407812 -66581122 + Charlie1a DNA MER1_type 1 191 -1264 1316 198 111 60 chr18 19407818 19408308 -66580626 + L1MC4a LINE L1 6079 6242 0 198 0 0 0 chr18 19408489 19408511 -66580423 + (A)n Simple_repeat Simple_repeat 1 22 0 578 278 167 14 chr18 19408994 19409347 -66579587 + L1MC4a LINE L1 5515 5921 -1887 682 181 0 8 chr18 19409528 19409655 -66579279 + FLAM_C SINE Alu 2 127 -6 282 56 0 0 chr18 19411044 19411080 -66577854 + (CCG)n Simple_repeat Simple_repeat 1 36 0 1592 246 81 35 chr18 19411595 19411943 -66576991 - L1ME2 LINE L1 -26 6138 5807 2417 87 0 7 chr18 19411943 19412253 -66576681 + AluSx SINE Alu 1 308 -4 1592 246 81 35 chr18 19412253 19412583 -66576351 - L1ME2 LINE L1 -357 5807 5429 2090 120 0 7 chr18 19412589 19412897 -66576037 - AluSx SINE Alu -6 306 1 688 243 77 54 chr18 19413069 19413292 -66575642 + MIR SINE MIR 2 235 -27 2426 82 0 0 chr18 19413651 19413944 -66574990 - AluSg SINE Alu -17 293 1 21 36 0 0 chr18 19414040 19414068 -66574866 + AT_rich Low_complexity Low_complexity 1 28 0 303 140 0 0 chr18 19414315 19414365 -66574569 + (TA)n Simple_repeat Simple_repeat 1 50 0 2193 94 0 0 chr18 19414365 19414652 -66574282 - AluSg SINE Alu -23 287 1 258 210 177 32 chr18 19414676 19414800 -66574134 - L1ME LINE L1 -295 5875 5734 22 35 0 0 chr18 19415289 19415318 -66573616 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr18 19416239 19416271 -66572663 + AT_rich Low_complexity Low_complexity 1 32 0 656 227 72 21 chr18 19416613 19416807 -66572127 + MLT1G1 LTR MaLR 3 206 -389 301 224 125 57 chr18 19417176 19417368 -66571566 + L1ME3A LINE L1 5423 5627 -494 351 273 91 36 chr18 19417388 19417553 -66571381 + L1ME3A LINE L1 5685 5858 -263 373 296 53 47 chr18 19418869 19419038 -66569896 + L2 LINE L2 2531 2700 -614 345 181 56 0 chr18 19419044 19419116 -66569818 - AluJ/FRAM SINE Alu 0 302 227 311 141 16 0 chr18 19419333 19419397 -66569537 + CT-rich Low_complexity Low_complexity 4 68 0 328 206 150 61 chr18 19419694 19419841 -66569093 - L1MC5 LINE L1 -38 7923 7756 228 35 0 0 chr18 19419841 19419870 -66569064 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 328 206 150 61 chr18 19419870 19419902 -66569032 - L1MC5 LINE L1 -205 7756 7728 255 313 92 23 chr18 19421715 19421846 -66567088 + MIR SINE MIR 13 152 -110 713 186 7 21 chr18 19421867 19422012 -66566922 + FLAM_C SINE Alu 1 143 0 2696 85 13 19 chr18 19422249 19422626 -66566308 - THE1C LTR MaLR 0 375 1 2450 77 0 0 chr18 19422659 19422957 -66565977 - AluY SINE Alu -13 298 1 325 345 102 10 chr18 19423336 19423533 -66565401 + MIR SINE MIR 48 262 0 32 91 0 0 chr18 19423644 19423732 -66565202 + AT_rich Low_complexity Low_complexity 1 88 0 536 244 127 42 chr18 19424570 19424878 -66564056 - HAL1 LINE L1 -630 1877 1544 2212 133 0 0 chr18 19425032 19425340 -66563594 + AluSx SINE Alu 1 308 -4 930 84 0 0 chr18 19425611 19425730 -66563204 - FLAM_C SINE Alu -14 119 1 317 207 12 24 chr18 19425853 19425935 -66562999 - L1MC5 LINE L1 -53 7908 7828 531 207 16 26 chr18 19426010 19426202 -66562732 - L1MC5 LINE L1 -551 7491 7260 334 277 39 69 chr18 19426704 19426834 -66562100 + L1ME3A LINE L1 5968 6093 -77 1749 95 8 21 chr18 19426861 19427102 -66561832 + AluSq SINE Alu 37 274 -39 1335 162 31 0 chr18 19427520 19427749 -66561185 + MER46A DNA MER2_type 1 236 0 21 0 0 0 chr18 19427786 19427807 -66561127 + AT_rich Low_complexity Low_complexity 1 21 0 2316 92 7 0 chr18 19428095 19428401 -66560533 + AluSq SINE Alu 2 309 -4 21 0 0 0 chr18 19428426 19428447 -66560487 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr18 19429200 19429245 -66559689 + AT_rich Low_complexity Low_complexity 1 45 0 1925 145 3 27 chr18 19429417 19429713 -66559221 + AluSx SINE Alu 1 289 -23 299 109 0 0 chr18 19429891 19429984 -66558950 - Alu SINE Alu 0 330 238 2152 95 0 0 chr18 19430032 19430355 -66558579 - AluY SINE Alu 0 323 1 1620 211 3 10 chr18 19430358 19430652 -66558282 - AluJo SINE Alu -20 292 1 390 259 48 32 chr18 19430895 19431076 -66557858 - L1MC/D LINE L1 -461 5701 5611 1841 135 19 39 chr18 19431095 19431407 -66557527 + AluJb SINE Alu 1 306 -6 2157 101 24 0 chr18 19431812 19432099 -66556835 + AluSx SINE Alu 1 294 -18 1835 149 38 3 chr18 19432247 19432536 -66556398 + AluSx SINE Alu 1 299 -13 25 0 0 0 chr18 19432599 19432624 -66556310 + AT_rich Low_complexity Low_complexity 1 25 0 2083 125 0 19 chr18 19432656 19432968 -66555966 - AluSx SINE Alu -6 306 1 320 43 22 0 chr18 19434972 19435018 -66553916 + (TG)n Simple_repeat Simple_repeat 1 47 0 4277 145 20 29 chr18 19435214 19435736 -66553198 - L1MA4 LINE L1 0 6482 5969 717 197 0 0 chr18 19435736 19435858 -66553076 - FLAM_C SINE Alu -11 122 1 4277 145 20 29 chr18 19435858 19436151 -66552783 - L1MA4 LINE L1 -513 5969 5675 23 0 0 0 chr18 19436174 19436197 -66552737 + AT_rich Low_complexity Low_complexity 1 23 0 649 187 49 0 chr18 19436198 19436321 -66552613 - FLAM_C SINE Alu -4 129 1 5067 192 43 60 chr18 19436335 19436476 -66552458 - L1MA4 LINE L1 -2552 3776 3634 414 0 0 0 chr18 19436476 19436522 -66552412 + (TA)n Simple_repeat Simple_repeat 1 46 0 5067 192 43 60 chr18 19436522 19436537 -66552397 - L1MA4 LINE L1 -2694 3634 3620 2016 117 25 3 chr18 19436537 19436819 -66552115 - AluSx SINE Alu -24 288 1 5067 192 43 60 chr18 19436819 19437239 -66551695 - L1MA4 LINE L1 -2708 3620 3194 2237 97 3 3 chr18 19437239 19437528 -66551406 - AluSp SINE Alu -23 290 2 5067 192 43 60 chr18 19437528 19438351 -66550583 - L1MA4 LINE L1 -3134 3194 2358 2294 104 0 0 chr18 19438351 19438649 -66550285 - AluSx SINE Alu -14 298 1 5067 192 43 60 chr18 19438649 19438859 -66550075 - L1MA4 LINE L1 -3970 2358 2146 1653 207 14 0 chr18 19438859 19439149 -66549785 - AluJo SINE Alu -18 294 1 2304 84 0 0 chr18 19439157 19439453 -66549481 - AluSc SINE Alu -13 296 1 5067 192 43 60 chr18 19439453 19439532 -66549402 - L1MA4 LINE L1 -4189 2139 2060 6014 111 13 55 chr18 19439532 19440528 -66548406 + LTR13 LTR ERVK 1 954 0 5067 192 43 60 chr18 19440528 19441199 -66547735 - L1MA4 LINE L1 -4268 2060 1379 2444 72 0 3 chr18 19441199 19441503 -66547431 - AluY SINE Alu -8 303 1 5067 192 43 60 chr18 19441503 19442933 -66546001 - L1MA4 LINE L1 -4949 1379 14 3137 211 15 11 chr18 19443477 19444132 -66544802 + L1M4 LINE L1 3892 4552 -1594 2015 184 36 39 chr18 19444132 19444600 -66544334 - MLT1C LTR MaLR 0 467 1 3137 211 15 11 chr18 19444600 19444699 -66544235 + L1M4 LINE L1 4552 4649 -1497 1107 141 0 0 chr18 19444703 19444859 -66544075 + AluSx SINE Alu 63 218 -94 417 369 47 0 chr18 19445276 19445531 -66543403 + L1MC4a LINE L1 5549 5815 -1993 2047 104 80 0 chr18 19446030 19446317 -66542617 + AluSx SINE Alu 2 311 -1 208 208 0 38 chr18 19447509 19447562 -66541372 + (CATCC)n Simple_repeat Simple_repeat 5 55 0 181 279 139 13 chr18 19447621 19447700 -66541234 - L2 LINE L2 -6 3307 3219 2132 147 3 3 chr18 19448606 19448918 -66540016 + AluJb SINE Alu 1 312 0 1553 155 79 26 chr18 19448989 19449293 -66539641 + 7SLRNA srpRNA srpRNA 1 320 0 30 0 0 0 chr18 19449539 19449569 -66539365 + AT_rich Low_complexity Low_complexity 1 30 0 270 0 0 0 chr18 19449577 19449607 -66539327 + (TC)n Simple_repeat Simple_repeat 2 31 0 428 304 111 59 chr18 19449667 19450091 -66538843 + HAL1b LINE L1 195 640 -708 679 95 51 0 chr18 19450401 19450559 -66538375 + (TA)n Simple_repeat Simple_repeat 1 166 0 308 264 136 44 chr18 19450644 19450894 -66538040 + L1MC4a LINE L1 6057 6329 -1479 1141 65 0 0 chr18 19451192 19451345 -66537589 - L1P LINE L1 -779 5367 5215 2702 55 8 16 chr18 19451345 19451709 -66537225 + L1PA8 LINE L1 5807 6169 -3 729 315 74 0 chr18 19451736 19451993 -66536941 + L1MC4 LINE L1 6701 6976 -1066 503 229 106 37 chr18 19451994 19452483 -66536451 + L1MC5 LINE L1 7359 7925 -36 211 250 80 34 chr18 19452484 19452572 -66536362 - L2 LINE L2 -937 2377 2286 21 36 0 0 chr18 19452817 19452845 -66536089 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr18 19453027 19453058 -66535876 + AT_rich Low_complexity Low_complexity 1 31 0 241 255 200 7 chr18 19455116 19455261 -66533673 - L1MC5 LINE L1 -35 7926 7754 234 108 0 0 chr18 19455465 19455502 -66533432 - L1MA3 LINE L1 0 6305 6269 26 0 0 0 chr18 19456125 19456151 -66532783 + AT_rich Low_complexity Low_complexity 1 26 0 600 270 63 90 chr18 19456174 19456619 -66532315 - HAL1 LINE L1 -38 2469 2037 527 234 104 19 chr18 19456620 19456774 -66532160 - L1ME2 LINE L1 -1 6163 5997 1548 265 120 22 chr18 19456800 19457516 -66531418 - HAL1 LINE L1 -475 2032 1247 393 274 32 0 chr18 19457757 19457852 -66531082 - HAL1 LINE L1 -1600 907 810 236 314 118 24 chr18 19457858 19458027 -66530907 - HAL1 LINE L1 -1658 849 665 464 250 56 39 chr18 19458218 19458398 -66530536 - HAL1 LINE L1 -2316 191 9 216 0 0 0 chr18 19460139 19460163 -66528771 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 1945 132 0 0 chr18 19460163 19460443 -66528491 - AluSx SINE Alu -27 285 6 1925 148 6 3 chr18 19461028 19461339 -66527595 - AluSx SINE Alu 0 312 1 1829 176 10 3 chr18 19461342 19461638 -66527296 - AluJo SINE Alu -14 298 1 2300 81 7 10 chr18 19461748 19462057 -66526877 - AluY SINE Alu -3 308 1 1515 216 0 7 chr18 19462285 19462572 -66526362 + AluJb SINE Alu 1 285 -27 934 230 24 19 chr18 19462676 19462889 -66526045 + MER20 DNA MER1_type 1 214 -5 780 199 74 31 chr18 19462972 19463228 -66525706 - L1MC5 LINE L1 -36 7925 7659 922 199 52 19 chr18 19463411 19463622 -66525312 + MER58A DNA MER1_type 4 221 -3 8011 210 45 24 chr18 19464156 19467052 -66521882 + L1MB3 LINE L1 3237 6182 -1 430 323 151 40 chr18 19467076 19467839 -66521095 - L2 LINE L2 -8 3264 2358 22 35 0 0 chr18 19468109 19468138 -66520796 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr18 19468160 19468188 -66520746 + AT_rich Low_complexity Low_complexity 1 28 0 673 232 14 0 chr18 19469576 19469714 -66519220 + FRAM SINE Alu 3 142 -34 2101 108 0 3 chr18 19469715 19470011 -66518923 - AluSx SINE Alu -17 295 1 207 0 0 0 chr18 19470031 19470054 -66518880 + (CAA)n Simple_repeat Simple_repeat 2 24 0 573 96 0 0 chr18 19470149 19470243 -66518691 + (TA)n Simple_repeat Simple_repeat 1 94 0 1453 158 36 82 chr18 19470314 19470618 -66518316 - AluJo SINE Alu -20 292 3 204 40 0 0 chr18 19472289 19472314 -66516620 + (T)n Simple_repeat Simple_repeat 1 25 0 1554 148 137 0 chr18 19472492 19472762 -66516172 - AluJb SINE Alu -4 308 2 733 171 18 0 chr18 19472829 19472961 -66515973 - MER58A DNA MER1_type 0 158 42 1169 172 10 5 chr18 19472961 19473164 -66515770 + U17 snRNA snRNA 1 204 -3 444 202 49 177 chr18 19473480 19473683 -66515251 - MER5B DNA MER1_type -1 177 1 773 152 0 8 chr18 19473861 19473986 -66514948 + FLAM_C SINE Alu 2 125 -18 2248 104 0 0 chr18 19473994 19474291 -66514643 + AluSg SINE Alu 2 298 -12 1857 161 0 3 chr18 19474373 19474677 -66514257 - AluJo SINE Alu -9 303 1 618 310 44 26 chr18 19476020 19476249 -66512685 - MIR SINE MIR -21 241 9 2459 58 0 10 chr18 19476925 19477235 -66511699 - AluY SINE Alu 0 311 5 1659 197 6 16 chr18 19478156 19478290 -66510644 + AluJo SINE Alu 1 135 -177 2050 144 7 0 chr18 19478290 19478589 -66510345 + AluSx SINE Alu 1 301 -11 1659 197 6 16 chr18 19478589 19478769 -66510165 + AluJo SINE Alu 135 312 0 21 0 0 0 chr18 19480147 19480168 -66508766 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 19484805 19484833 -66504101 + AT_rich Low_complexity Low_complexity 1 28 0 245 50 0 25 chr18 19486212 19486252 -66502682 + (CAAAAA)n Simple_repeat Simple_repeat 1 39 0 214 178 0 0 chr18 19486435 19486480 -66502454 + A-rich Low_complexity Low_complexity 1 45 0 180 0 0 0 chr18 19486596 19486616 -66502318 + (T)n Simple_repeat Simple_repeat 1 20 0 1093 219 32 16 chr18 19488261 19488508 -66500426 - MIR SINE MIR -10 252 2 238 263 0 18 chr18 19488836 19488893 -66500041 - L2 LINE L2 -1 3312 3257 246 224 86 0 chr18 19489088 19489146 -66499788 - L2 LINE L2 -1 3271 3209 271 231 0 15 chr18 19489724 19489789 -66499145 + MLT1F1 LTR MaLR 45 108 -459 2651 172 67 0 chr18 19489819 19490342 -66498592 + L1MC3 LINE L1 7211 7768 -17 195 275 100 75 chr18 19490708 19490828 -66498106 - L2 LINE L2 -810 2504 2382 2286 77 0 14 chr18 19490828 19491125 -66497809 + AluSg1 SINE Alu 3 295 -14 390 21 0 0 chr18 19491141 19491188 -66497746 + (CA)n Simple_repeat Simple_repeat 1 47 0 1814 149 0 30 chr18 19491310 19491611 -66497323 + AluJb SINE Alu 5 296 -16 805 90 0 0 chr18 19491613 19491724 -66497210 - AluY SINE Alu -13 298 188 434 232 305 18 chr18 19491737 19492022 -66496912 - HAL1 LINE L1 -5 2502 2136 2381 79 0 0 chr18 19492565 19492870 -66496064 + AluY SINE Alu 1 305 -6 30 0 0 0 chr18 19493043 19493073 -66495861 + AT_rich Low_complexity Low_complexity 1 30 0 272 196 0 20 chr18 19493439 19493490 -66495444 + AluY SINE Alu 117 166 -135 * 339 144 29 10 chr18 19493459 19493542 -66495392 + AluJo SINE Alu 79 128 -174 658 202 24 106 chr18 19494713 19494845 -66494089 - L1M4 LINE L1 -1361 4785 4675 1596 141 27 15 chr18 19494845 19495107 -66493827 - AluJb SINE Alu -14 298 34 658 202 24 106 chr18 19495107 19495182 -66493752 - L1M4 LINE L1 -1471 4675 4595 942 164 7 0 chr18 19495244 19495390 -66493544 + AluJo SINE Alu 134 280 -32 459 208 97 13 chr18 19495406 19495560 -66493374 - L1M4 LINE L1 -1761 4385 4219 533 214 65 79 chr18 19495629 19495844 -66493090 + L1M4 LINE L1 4824 5035 -1111 674 168 0 0 chr18 19495845 19495952 -66492982 + FLAM_C SINE Alu 1 107 -36 198 103 0 0 chr18 19496052 19496081 -66492853 + (A)n Simple_repeat Simple_repeat 1 29 0 366 284 39 0 chr18 19496316 19496418 -66492516 - MIR SINE MIR -32 230 125 1796 97 74 0 chr18 19498422 19498680 -66490254 - AluSx SINE Alu -35 277 1 2233 214 36 13 chr18 19498682 19498953 -66489981 - L1ME LINE L1 -678 5486 5223 2289 94 10 10 chr18 19498953 19499261 -66489673 - AluY SINE Alu -3 308 1 2233 214 36 13 chr18 19499261 19499565 -66489369 - L1ME LINE L1 -941 5223 4892 2158 136 0 3 chr18 19499565 19499874 -66489060 - AluSg SINE Alu -2 308 1 2233 214 36 13 chr18 19499874 19500131 -66488803 - L1ME LINE L1 -1272 4892 4643 259 167 19 0 chr18 19500132 19500186 -66488748 + Charlie1 DNA MER1_type 2707 2761 0 500 258 96 30 chr18 19500193 19500360 -66488574 + MIR SINE MIR 84 261 -1 257 303 103 71 chr18 19500391 19500701 -66488233 - MLT1K LTR MaLR -137 451 132 29 49 0 16 chr18 19501420 19501459 -66487475 + AT_rich Low_complexity Low_complexity 1 40 -20 622 212 34 0 chr18 19501459 19501577 -66487357 - FLAM_A SINE Alu -11 122 1 29 49 0 16 chr18 19501577 19501598 -66487336 + AT_rich Low_complexity Low_complexity 40 60 0 2081 91 46 11 chr18 19502129 19502414 -66486520 + AluSq SINE Alu 1 295 -18 408 245 77 56 chr18 19503792 19503988 -66484946 - L1MC5 LINE L1 -516 7445 7246 220 250 21 0 chr18 19504636 19504684 -66484250 - MIR SINE MIR -21 241 193 29 60 0 0 chr18 19505337 19505387 -66483547 + AT_rich Low_complexity Low_complexity 1 50 0 309 286 211 14 chr18 19505648 19505795 -66483139 + L1ME LINE L1 5492 5667 -454 180 0 0 0 chr18 19507808 19507828 -66481106 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 655 130 19 9 chr18 19507831 19507939 -66480995 - AluSg/x SINE Alu -25 285 177 216 0 0 0 chr18 19507964 19507988 -66480946 + (A)n Simple_repeat Simple_repeat 1 24 0 957 213 8 71 chr18 19508175 19508414 -66480520 - MER58A DNA MER1_type 0 224 1 222 37 0 0 chr18 19508547 19508574 -66480360 + (T)n Simple_repeat Simple_repeat 1 27 0 1945 156 23 0 chr18 19508825 19509126 -66479808 - AluSx SINE Alu -4 308 1 1258 226 0 15 chr18 19509499 19509764 -66479170 + AluJo SINE Alu 22 282 -30 213 156 62 0 chr18 19509965 19510029 -66478905 + (TATAA)n Simple_repeat Simple_repeat 3 70 0 1943 151 17 0 chr18 19510627 19510919 -66478015 - AluJo SINE Alu -15 297 1 323 274 170 0 chr18 19511360 19511495 -66477439 + MIR SINE MIR 1 158 -104 335 98 0 16 chr18 19511699 19511760 -66477174 - Alu SINE Alu 0 302 243 2259 183 189 53 chr18 19511768 19512446 -66476488 - LTR28 LTR ERV1 -10 820 121 2412 86 0 7 chr18 19512446 19512747 -66476187 + AluSc SINE Alu 1 299 -10 2259 183 189 53 chr18 19512747 19512887 -66476047 - LTR28 LTR ERV1 -709 121 1 632 213 0 0 chr18 19512887 19513009 -66475925 - AluSg/x SINE Alu -66 246 125 926 166 17 6 chr18 19516841 19517016 -66471918 - L1MB2 LINE L1 -9 6162 5986 2081 136 0 7 chr18 19519788 19520090 -66468844 + AluJb SINE Alu 1 300 -12 603 151 121 12 chr18 19520616 19520720 -66468214 + L1MCb LINE L1 1011 1102 -4943 1567 170 33 7 chr18 19520720 19520996 -66467938 + AluJo SINE Alu 26 308 -4 603 151 121 12 chr18 19520996 19521057 -66467877 + L1MCb LINE L1 1102 1194 -4851 2259 113 3 0 chr18 19521094 19521395 -66467539 - AluSq SINE Alu -11 302 1 25 0 0 0 chr18 19521397 19521422 -66467512 + AT_rich Low_complexity Low_complexity 1 25 0 1302 213 58 34 chr18 19521422 19521890 -66467044 + L1MCb LINE L1 1421 2088 -4657 24 53 0 0 chr18 19521896 19521934 -66467000 + AT_rich Low_complexity Low_complexity 1 38 0 2306 98 20 0 chr18 19521948 19522253 -66466681 + AluSq SINE Alu 1 311 -2 554 138 31 39 chr18 19522279 19522409 -66466525 + L1MA4 LINE L1 3474 3602 -3963 * 3378 147 49 14 chr18 19522397 19522944 -66465990 + L1MA4 LINE L1 4502 5083 -2482 2067 113 77 14 chr18 19522944 19523297 -66465637 - THE1C LTR MaLR 0 375 1 3378 147 49 14 chr18 19523297 19523478 -66465456 + L1MA4 LINE L1 5083 5256 -2309 1936 193 75 2 chr18 19523480 19523906 -66465028 - LTR32 LTR ERVL 0 471 15 6882 160 66 10 chr18 19523906 19525476 -66463458 + L1MA4 LINE L1 5254 6922 -743 2056 154 16 0 chr18 19525476 19525781 -66463153 + AluSx SINE Alu 1 310 -2 234 0 0 0 chr18 19525939 19525965 -66462969 + (A)n Simple_repeat Simple_repeat 1 26 0 452 177 82 116 chr18 19525975 19526053 -66462881 + L1MA4 LINE L1 7494 7573 -146 2048 150 0 3 chr18 19526053 19526366 -66462568 + AluSx SINE Alu 1 312 0 452 177 82 116 chr18 19526366 19526519 -66462415 + L1MA4 LINE L1 7573 7717 -2 2193 190 11 44 chr18 19526529 19526565 -66462369 + L1MC2 LINE L1 5818 5854 -490 1981 119 28 0 chr18 19526565 19526851 -66462083 + AluSc SINE Alu 1 294 -15 2193 190 11 44 chr18 19526851 19527334 -66461600 + L1MC2 LINE L1 5854 6320 -24 3525 170 27 52 chr18 19527343 19528156 -66460778 - Tigger6a DNA MER2_type -276 807 15 288 205 134 18 chr18 19528179 19528350 -66460584 - L1MEc LINE L1 -4086 2310 2120 42474 35 3 1 chr18 19528454 19534595 -66454339 - L1PA4 LINE L1 -3 6152 2 326 286 125 68 chr18 19534600 19534756 -66454178 - L1MEc LINE L1 -4371 2025 1879 2496 82 0 0 chr18 19534756 19535059 -66453875 - AluY SINE Alu -8 303 1 326 286 125 68 chr18 19535059 19535182 -66453752 - L1MEc LINE L1 -4517 1879 1730 1048 281 68 94 chr18 19535202 19535286 -66453648 - L2 LINE L2 -540 2774 2689 1481 212 3 23 chr18 19535286 19535626 -66453308 + AluJo SINE Alu 1 312 0 1048 281 68 94 chr18 19535626 19535733 -66453201 - L2 LINE L2 -625 2689 2581 2070 111 24 0 chr18 19535733 19536021 -66452913 + AluSq SINE Alu 1 295 -18 1048 281 68 94 chr18 19536021 19536390 -66452544 - L2 LINE L2 -733 2581 2228 372 203 120 8 chr18 19536402 19536535 -66452399 - MER69 DNA AcHobo 0 2526 2379 726 301 26 0 chr18 19536722 19536991 -66451943 + L1ME3A LINE L1 5558 5833 -337 1151 211 70 51 chr18 19536996 19537409 -66451525 + L1M4c LINE L1 1268 1688 -4696 650 130 0 68 chr18 19537411 19537557 -66451377 - L1M4 LINE L1 -386 5798 5663 1607 245 133 76 chr18 19537586 19537716 -66451218 - MER21B LTR ERV1 -52 811 690 1842 114 0 0 chr18 19537716 19537962 -66450972 + AluSg SINE Alu 49 294 -16 1607 245 133 76 chr18 19537962 19538583 -66450351 - MER21B LTR ERV1 -173 690 17 432 184 23 0 chr18 19538599 19538686 -66450248 - L1M4 LINE L1 -518 5666 5578 * 1439 151 3 45 chr18 19538679 19538732 -66450202 + L1MB7 LINE L1 5885 5939 -245 2045 112 35 0 chr18 19538732 19539017 -66449917 + AluSg SINE Alu 1 295 -15 1439 151 3 45 chr18 19539017 19539255 -66449679 + L1MB7 LINE L1 5939 6164 -20 2009 111 38 7 chr18 19539559 19539847 -66449087 - AluSx SINE Alu -15 297 1 861 198 120 80 chr18 19539865 19540239 -66448695 - L1MC5 LINE L1 -950 7011 6623 1617 203 3 26 chr18 19540239 19540549 -66448385 - AluJo SINE Alu -7 305 3 2172 111 7 3 chr18 19540637 19540934 -66448000 - AluSq SINE Alu -15 298 1 22 56 0 0 chr18 19540961 19540997 -66447937 + AT_rich Low_complexity Low_complexity 1 36 0 31 68 0 0 chr18 19541185 19541244 -66447690 + AT_rich Low_complexity Low_complexity 1 59 0 967 111 5 106 chr18 19541609 19541798 -66447136 - AluJ SINE Alu -18 294 125 201 173 58 0 chr18 19541798 19541850 -66447084 + (TA)n Simple_repeat Simple_repeat 1 55 0 748 165 8 8 chr18 19541850 19541977 -66446957 - AluJ SINE Alu -183 129 3 292 358 168 0 chr18 19542879 19543058 -66445876 - MIR SINE MIR -1 261 53 253 274 0 0 chr18 19543062 19543124 -66445810 + CT-rich Low_complexity Low_complexity 3 64 0 816 207 6 24 chr18 19543599 19543768 -66445166 - FRAM SINE Alu 0 166 1 236 274 0 16 chr18 19544013 19544075 -66444859 - MIR SINE MIR -200 62 2 1779 237 56 9 chr18 19544159 19544712 -66444222 - MER69B DNA AcHobo 0 1226 648 225 0 0 0 chr18 19544713 19544738 -66444196 + (T)n Simple_repeat Simple_repeat 1 25 0 226 283 108 33 chr18 19545111 19545231 -66443703 - MIR SINE MIR -78 184 56 308 212 159 0 chr18 19545621 19545734 -66443200 + MER94 DNA DNA 2 132 -2 210 171 0 0 chr18 19545883 19545924 -66443010 - L2 LINE L2 -1 3312 3272 398 231 29 10 chr18 19545996 19546100 -66442834 + MIR SINE MIR 88 193 -69 2154 114 10 0 chr18 19546138 19546437 -66442497 - AluSp SINE Alu -11 302 1 2432 86 0 0 chr18 19546686 19546988 -66441946 + AluSx SINE Alu 1 302 -10 207 114 0 0 chr18 19547814 19547849 -66441085 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 27 0 0 0 chr18 19547856 19547883 -66441051 + AT_rich Low_complexity Low_complexity 1 27 0 1790 152 0 90 chr18 19548020 19548363 -66440571 - AluJb SINE Alu 0 312 1 1789 149 7 40 chr18 19550237 19550538 -66438396 + AluJo SINE Alu 1 291 -21 27 0 0 0 chr18 19550538 19550565 -66438369 + AT_rich Low_complexity Low_complexity 1 27 0 1769 119 0 8 chr18 19550766 19551017 -66437917 - AluSx SINE Alu -22 290 42 815 246 11 0 chr18 19552854 19553037 -66435897 - AluJb SINE Alu -2 310 126 2140 134 0 0 chr18 19553133 19553439 -66435495 + AluJo SINE Alu 6 311 -1 288 211 62 70 chr18 19553453 19553581 -66435353 + MIR SINE MIR 136 262 0 517 270 7 34 chr18 19553666 19553814 -66435120 - L2 LINE L2 -9 3304 3161 1775 152 0 33 chr18 19553815 19554117 -66434817 + AluJo SINE Alu 1 292 -20 238 279 31 44 chr18 19554287 19554472 -66434462 - MIR3 SINE MIR -58 150 3 2356 110 131 8 chr18 19555245 19555626 -66433308 - MSTA LTR MaLR 0 428 1 1747 245 87 9 chr18 19555966 19556076 -66432858 + MER69 DNA AcHobo 8 108 -619 1880 157 0 22 chr18 19556076 19556389 -66432545 - AluJo SINE Alu -6 306 1 1747 245 87 9 chr18 19556389 19556850 -66432084 + MER69 DNA AcHobo 108 625 -102 800 159 0 35 chr18 19556851 19556996 -66431938 + FLAM_C SINE Alu 1 140 -3 2629 65 0 0 chr18 19557035 19557345 -66431589 + AluY SINE Alu 1 310 -1 207 0 0 0 chr18 19557534 19557557 -66431377 + (T)n Simple_repeat Simple_repeat 1 23 0 342 233 78 9 chr18 19558002 19558118 -66430816 - MIR SINE MIR -7 255 132 2876 19 0 0 chr18 19558885 19559202 -66429732 + AluYb8 SINE Alu 1 317 -1 1439 91 0 0 chr18 19559491 19559677 -66429257 + L1PA8 LINE L1 5987 6172 0 24 85 0 0 chr18 19561370 19561429 -66427505 + AT_rich Low_complexity Low_complexity 1 59 0 860 257 34 11 chr18 19561736 19562001 -66426933 + L1ME LINE L1 5335 5605 -557 1655 152 65 4 chr18 19562066 19562343 -66426591 + AluJo SINE Alu 3 296 -16 1888 110 20 0 chr18 19562445 19562699 -66426235 - AluSx SINE Alu -53 259 1 2297 85 14 3 chr18 19562772 19563067 -66425867 - AluSc SINE Alu -9 300 3 1758 203 16 68 chr18 19563116 19563478 -66425456 + L1MC2 LINE L1 4843 5172 -974 633 161 110 0 chr18 19563478 19563596 -66425338 + FLAM_C SINE Alu 3 133 0 1758 203 16 68 chr18 19563596 19563745 -66425189 + L1MC2 LINE L1 5172 5327 -819 2282 121 0 0 chr18 19563745 19564050 -66424884 + AluSx SINE Alu 1 305 -7 189 0 0 0 chr18 19564097 19564118 -66424816 + (T)n Simple_repeat Simple_repeat 1 21 0 2226 172 52 57 chr18 19564252 19564756 -66424178 + L1MC2 LINE L1 5292 5794 -550 855 67 29 0 chr18 19564756 19564860 -66424074 + U6 snRNA snRNA 1 107 0 2226 172 52 57 chr18 19564860 19564935 -66423999 + L1MC2 LINE L1 5794 5868 -476 2477 80 3 3 chr18 19565094 19565407 -66423527 + AluSq SINE Alu 1 313 0 1030 139 37 32 chr18 19565507 19565694 -66423240 - AluJb SINE Alu -91 221 34 363 157 0 14 chr18 19565699 19565769 -66423165 - L1M4 LINE L1 -1483 4663 4595 1143 157 6 0 chr18 19565831 19566009 -66422925 + FRAM SINE Alu 1 176 0 1819 199 86 43 chr18 19566076 19566231 -66422703 + L1ME LINE L1 5122 5269 -897 1948 149 0 13 chr18 19566231 19566539 -66422395 + AluSx SINE Alu 1 304 -8 1819 199 86 43 chr18 19566539 19567035 -66421899 + L1ME LINE L1 5269 5806 -360 1061 80 22 0 chr18 19567132 19567270 -66421664 + FRAM SINE Alu 36 176 0 1110 124 0 18 chr18 19617315 19617484 -66371450 - AluSg/x SINE Alu 0 310 145 4139 198 73 14 chr18 19617499 19617705 -66371229 + L1MD1 LINE L1 4723 4915 -1327 183 42 0 0 chr18 19617705 19617729 -66371205 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4139 198 73 14 chr18 19617729 19618861 -66370073 + L1MD1 LINE L1 4915 6147 -95 305 143 36 36 chr18 19618871 19618955 -66369979 + L1M4 LINE L1 4637 4720 -1426 476 157 67 0 chr18 19618964 19619053 -66369881 + L1MD1 LINE L1 6147 6241 -1 2351 88 3 0 chr18 19619061 19619356 -66369578 + AluSp SINE Alu 1 296 -17 1887 159 3 3 chr18 19619732 19620033 -66368901 + AluJb SINE Alu 1 301 -11 429 275 61 15 chr18 19620720 19620851 -66368083 + L2 LINE L2 3136 3272 0 491 259 66 7 chr18 19620867 19621063 -66367871 - MIR SINE MIR -24 238 28 1319 132 44 0 chr18 19621578 19621783 -66367151 - AluJo SINE Alu -8 304 91 3943 154 24 50 chr18 19621833 19622047 -66366887 + L1MB3 LINE L1 5407 5625 -558 2460 84 0 0 chr18 19622047 19622345 -66366589 + AluSc SINE Alu 1 298 -11 2167 122 0 37 chr18 19622354 19622675 -66366259 + AluSx SINE Alu 1 309 -3 3943 154 24 50 chr18 19622675 19623247 -66365687 + L1MB3 LINE L1 5633 6182 -1 300 191 16 0 chr18 19623264 19623327 -66365607 - MIR SINE MIR -26 236 173 849 154 128 0 chr18 19623712 19623861 -66365073 + FRAM SINE Alu 1 163 -13 375 23 0 0 chr18 19623869 19623913 -66365021 + (TG)n Simple_repeat Simple_repeat 1 44 0 257 393 21 17 chr18 19624025 19624264 -66364670 + L2 LINE L2 2850 3089 -183 233 206 37 0 chr18 19624460 19624567 -66364367 + (TA)n Simple_repeat Simple_repeat 2 112 0 1900 159 3 10 chr18 19624902 19625203 -66363731 - AluJb SINE Alu -13 299 1 810 143 174 0 chr18 19625477 19625638 -66363296 - MER53 DNA DNA 0 189 1 293 286 50 29 chr18 19625674 19625814 -66363120 - MIR SINE MIR 0 262 120 2179 107 7 3 chr18 19626171 19626470 -66362464 - AluSx SINE Alu -12 300 1 1116 176 83 0 chr18 19626473 19626666 -66362268 - AluJo SINE Alu -17 295 87 2322 74 0 3 chr18 19626908 19627218 -66361716 + AluSc SINE Alu 1 309 0 632 257 17 68 chr18 19627348 19627547 -66361387 + MIR SINE MIR 9 196 -66 2214 94 23 3 chr18 19627547 19627846 -66361088 + AluSx SINE Alu 1 305 -7 632 257 17 68 chr18 19627846 19627883 -66361051 + MIR SINE MIR 196 233 -29 307 283 35 9 chr18 19627899 19628012 -66360922 - MLT1K LTR MaLR -25 563 448 285 271 68 58 chr18 19628114 19628376 -66360558 - MLT1L LTR MaLR -289 299 88 967 211 10 34 chr18 19628516 19628724 -66360210 + MLT1A1 LTR MaLR 3 205 -160 459 187 187 0 chr18 19628841 19628948 -66359986 + MLT1A1 LTR MaLR 247 373 -1 1613 108 58 0 chr18 19628965 19629205 -66359729 - AluSx SINE Alu -3 309 56 1298 129 0 0 chr18 19629206 19629377 -66359557 - AluSx SINE Alu -137 175 5 2201 136 0 0 chr18 19629882 19630192 -66358742 - AluSx SINE Alu -2 310 1 2216 167 49 61 chr18 19630612 19631120 -66357814 - MLT1D LTR MaLR -3 502 1 4050 170 45 18 chr18 19631233 19631326 -66357608 + L1MB5 LINE L1 5351 5440 -734 1777 169 82 8 chr18 19631326 19631474 -66357460 + MSTD LTR MaLR 1 137 -259 2118 132 0 3 chr18 19631474 19631769 -66357165 - AluJb SINE Alu -16 296 3 1777 169 82 8 chr18 19631769 19631987 -66356947 + MSTD LTR MaLR 137 394 -2 4050 170 45 18 chr18 19631987 19632695 -66356239 + L1MB5 LINE L1 5440 6174 0 589 149 0 83 chr18 19632783 19632904 -66356030 - FLAM_A SINE Alu -21 121 11 312 270 138 13 chr18 19632918 19633077 -66355857 - L1MC4a LINE L1 -1788 6020 5842 595 199 33 133 chr18 19633128 19633303 -66355631 - L1ME LINE L1 -3113 2967 2776 1830 137 0 4 chr18 19633303 19633565 -66355369 + AluSx SINE Alu 1 261 -51 378 0 0 0 chr18 19633569 19633611 -66355323 + (CAAA)n Simple_repeat Simple_repeat 4 45 0 595 199 33 133 chr18 19633611 19633731 -66355203 - L1ME LINE L1 -3307 2773 2697 971 122 32 6 chr18 19633845 19634001 -66354933 + MLT1B LTR MaLR 3 162 -228 2194 184 27 2 chr18 19634110 19634512 -66354422 - L1MD2 LINE L1 -300 6059 5648 2820 209 68 121 chr18 19634518 19635133 -66353801 - L1ME LINE L1 -4002 2259 1613 1911 158 3 0 chr18 19635133 19635418 -66353516 - AluSx SINE Alu -26 286 1 2820 209 68 121 chr18 19635418 19635808 -66353126 - L1ME LINE L1 -4648 1613 1204 2304 115 3 3 chr18 19635808 19636120 -66352814 - AluSx SINE Alu 0 312 1 2820 209 68 121 chr18 19636120 19636780 -66352154 - L1ME LINE L1 -5057 1204 729 13219 126 67 0 chr18 19636780 19639633 -66349301 + L1PA10 LINE L1 3279 6168 0 2820 209 68 121 chr18 19639633 19639851 -66349083 - L1ME LINE L1 -5532 729 501 495 225 7 43 chr18 19640658 19640796 -66348138 + MER5B DNA MER1_type 1 133 -45 290 323 10 0 chr18 19640831 19640930 -66348004 + L2 LINE L2 2371 2470 -844 1854 164 3 0 chr18 19641018 19641311 -66347623 - AluJb SINE Alu -18 294 1 2248 103 3 0 chr18 19641782 19642074 -66346860 + AluSq SINE Alu 1 293 -20 331 341 72 7 chr18 19642103 19642241 -66346693 + L2 LINE L2 3126 3272 0 629 251 42 11 chr18 19642556 19642747 -66346187 + MIR SINE MIR 38 234 -28 768 190 0 0 chr18 19643235 19643356 -66345578 + FLAM_A SINE Alu 4 124 -18 444 278 134 5 chr18 19643575 19643762 -66345172 - MIR SINE MIR -6 256 46 634 144 64 40 chr18 19644409 19644534 -66344400 - AluJb SINE Alu -182 130 3 1542 137 17 53 chr18 19644808 19645108 -66343826 + AluJb SINE Alu 9 297 -15 2338 107 0 0 chr18 19645143 19645442 -66343492 - AluSx SINE Alu -13 299 1 186 226 235 20 chr18 19645725 19645827 -66343107 + MER5A DNA MER1_type 43 166 -23 * 521 198 0 0 chr18 19645752 19645853 -66343081 - MER5A DNA MER1_type -80 109 9 1648 206 77 14 chr18 19645860 19646225 -66342709 - MLT1B LTR MaLR -2 388 1 258 172 0 31 chr18 19646253 19646317 -66342617 - MER33 DNA MER1_type -26 337 276 1198 185 40 4 chr18 19646346 19646595 -66342339 - MER33 DNA MER1_type -66 258 1 599 269 67 54 chr18 19646856 19647153 -66341781 + L2 LINE L2 2975 3275 -38 1965 146 7 4 chr18 19647424 19647705 -66341229 + AluSx SINE Alu 1 282 -30 1868 169 24 102 chr18 19647821 19648030 -66340904 + MLT2C2 LTR ERVL 12 236 -228 829 139 8 0 chr18 19648030 19648152 -66340782 + FLAM_C SINE Alu 1 123 -10 1868 169 24 102 chr18 19648152 19648188 -66340746 + MLT2C2 LTR ERVL 236 273 -191 1665 181 25 0 chr18 19648188 19648465 -66340469 + AluJo SINE Alu 1 284 -28 1868 169 24 102 chr18 19648465 19648709 -66340225 + MLT2C2 LTR ERVL 273 464 0 457 243 191 0 chr18 19648711 19648863 -66340071 - MER5A DNA MER1_type 0 189 9 1109 151 6 0 chr18 19648991 19649157 -66339777 + AluJb SINE Alu 135 301 -11 593 236 39 0 chr18 19649179 19649306 -66339628 - MER58B DNA MER1_type 0 341 210 2021 91 0 4 chr18 19649408 19649661 -66339273 - AluY SINE Alu -59 252 1 25 0 0 0 chr18 19649661 19649686 -66339248 + AT_rich Low_complexity Low_complexity 1 25 0 550 200 8 40 chr18 19649687 19649812 -66339122 - FLAM_C SINE Alu -21 122 2 998 174 0 18 chr18 19650038 19650205 -66338729 - AluJo SINE Alu -16 296 133 301 163 22 0 chr18 19650205 19650297 -66338637 + (TA)n Simple_repeat Simple_repeat 2 95 0 767 110 0 59 chr18 19650297 19650415 -66338519 - AluJo SINE Alu -187 125 15 294 50 0 0 chr18 19650425 19650465 -66338469 + (CACAA)n Simple_repeat Simple_repeat 4 43 0 216 0 0 0 chr18 19650676 19650700 -66338234 + (CA)n Simple_repeat Simple_repeat 1 24 0 1625 182 16 26 chr18 19650946 19651254 -66337680 - AluJb SINE Alu -7 305 1 301 261 0 29 chr18 19651384 19651453 -66337481 + L2 LINE L2 3206 3272 0 301 340 157 0 chr18 19652420 19652573 -66336361 + MIR SINE MIR 80 256 -6 300 296 58 46 chr18 19652699 19652830 -66336104 - L1MC4a LINE L1 -1884 5924 5787 1888 160 0 0 chr18 19652830 19653130 -66335804 + AluSx SINE Alu 5 304 -8 300 296 58 46 chr18 19653130 19653238 -66335696 - L1MC4a LINE L1 -2021 5787 5682 244 346 131 9 chr18 19653268 19653375 -66335559 + L3 LINE CR1 626 745 -832 2273 78 0 0 chr18 19653614 19653908 -66335026 + AluSx SINE Alu 2 295 -17 2400 68 0 3 chr18 19653980 19654289 -66334645 + AluY SINE Alu 1 308 -3 258 322 0 96 chr18 19654357 19654503 -66334431 - L3 LINE CR1 -619 958 827 225 335 53 33 chr18 19654536 19654688 -66334246 - L3 LINE CR1 -682 895 741 215 375 74 13 chr18 19654733 19654962 -66333972 - L2 LINE L2 -527 2787 2545 460 290 77 12 chr18 19655199 19655368 -66333566 + L3 LINE CR1 1209 1388 -189 1533 248 87 13 chr18 19655679 19656232 -66332702 + L2 LINE L2 2717 3312 -1 2022 113 3 0 chr18 19656484 19656809 -66332125 - AluSx SINE Alu 0 326 1 967 224 70 0 chr18 19657151 19657365 -66331569 + MIR SINE MIR 13 241 -21 245 220 0 0 chr18 19657575 19657625 -66331309 + L2 LINE L2 3221 3270 -2 253 229 16 104 chr18 19658694 19658810 -66330124 + L2 LINE L2 3143 3239 -74 1847 113 63 0 chr18 19658810 19659094 -66329840 - AluJo SINE Alu -10 302 1 253 229 16 104 chr18 19659094 19659160 -66329774 + L2 LINE L2 3239 3309 -4 866 154 0 0 chr18 19659639 19659782 -66329152 + FLAM_C SINE Alu 1 143 0 329 241 70 38 chr18 19659866 19660024 -66328910 - L1ME4a LINE L1 -217 5904 5742 2344 123 18 40 chr18 19660029 19660314 -66328620 - MLT1B LTR MaLR 0 390 115 1893 96 75 3 chr18 19660314 19660596 -66328338 - AluSq SINE Alu -11 302 1 2344 123 18 40 chr18 19660596 19660709 -66328225 - MLT1B LTR MaLR -275 115 1 1130 201 37 8 chr18 19660709 19660953 -66327981 - MIR SINE MIR -4 258 8 1941 128 7 3 chr18 19661041 19661331 -66327603 + AluSx SINE Alu 1 291 -21 271 263 81 20 chr18 19661333 19661432 -66327502 - L1ME4a LINE L1 -495 5626 5522 198 0 0 0 chr18 19661832 19661854 -66327080 + (CAA)n Simple_repeat Simple_repeat 2 23 0 2013 133 0 0 chr18 19661860 19662154 -66326780 + AluSx SINE Alu 1 294 -18 2110 105 0 46 chr18 19662157 19662481 -66326453 + AluSx SINE Alu 1 309 -3 2203 75 10 3 chr18 19662800 19663092 -66325842 - AluSp SINE Alu -19 294 1 836 92 0 0 chr18 19664041 19664150 -66324784 + FLAM_C SINE Alu 12 120 -23 201 39 0 0 chr18 19664150 19664176 -66324758 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1225 102 0 0 chr18 19664492 19664659 -66324275 - AluY SINE Alu -5 306 140 248 331 55 16 chr18 19666041 19666168 -66322766 - MIR SINE MIR -128 134 3 1832 133 17 33 chr18 19666519 19666821 -66322113 - AluJb SINE Alu -15 297 1 1581 147 41 51 chr18 19666884 19667198 -66321736 - AluJo SINE Alu -1 311 1 2086 117 3 0 chr18 19667603 19667902 -66321032 + AluSg SINE Alu 1 300 -10 2121 113 0 0 chr18 19668797 19669097 -66319837 + AluSx SINE Alu 1 300 -12 533 295 124 30 chr18 19669288 19669435 -66319499 + MIR SINE MIR 4 182 -80 2216 90 10 0 chr18 19669435 19669736 -66319198 + AluSx SINE Alu 1 304 -8 533 295 124 30 chr18 19669736 19669822 -66319112 + MIR SINE MIR 182 259 -3 349 291 90 26 chr18 19670042 19670231 -66318703 + MIR SINE MIR 9 209 -53 333 0 0 0 chr18 19671936 19671973 -66316961 + (TG)n Simple_repeat Simple_repeat 2 38 0 494 263 50 31 chr18 19672013 19672173 -66316761 + MIR SINE MIR 34 196 -66 333 248 263 0 chr18 19672175 19672308 -66316626 + MER5A DNA MER1_type 15 182 -7 205 238 16 48 chr18 19672814 19672877 -66316057 - MIR3 SINE MIR -6 202 142 436 216 173 7 chr18 19672913 19673052 -66315882 + MIR SINE MIR 66 227 -35 523 125 0 0 chr18 19673322 19673402 -66315532 - MADE1 DNA Mariner 0 80 1 723 290 42 0 chr18 19673402 19673619 -66315315 - MIR SINE MIR -30 232 7 316 245 238 13 chr18 19673803 19673954 -66314980 - MIR SINE MIR -32 230 46 802 94 0 8 chr18 19674672 19674897 -66314037 - AluY SINE Alu 0 311 2 1988 107 6 41 chr18 19674897 19675215 -66313719 - AluSx SINE Alu -5 307 1 243 0 0 0 chr18 19675218 19675245 -66313689 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1763 84 0 0 chr18 19675267 19675494 -66313440 - AluSx SINE Alu -85 227 1 792 136 0 0 chr18 19676334 19676452 -66312482 - FLAM_C SINE Alu -15 118 1 276 345 14 48 chr18 19676823 19676968 -66311966 - MIR SINE MIR -64 198 59 1917 110 3 11 chr18 19677434 19677740 -66311194 + AluSg SINE Alu 1 304 0 1380 108 5 15 chr18 19677985 19678188 -66310746 + AluSg/x SINE Alu 98 298 -12 394 324 7 0 chr18 19680616 19680752 -66308182 + L1MC/D LINE L1 5684 5820 -1988 2393 62 3 3 chr18 19680760 19681067 -66307867 + AluY SINE Alu 1 307 -4 535 191 0 0 chr18 19681071 19681155 -66307779 + FLAM_C SINE Alu 35 118 -25 228 256 0 49 chr18 19681201 19681283 -66307651 + L1MC/D LINE L1 5834 5911 -1897 324 0 0 0 chr18 19681288 19681324 -66307610 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 1276 168 31 62 chr18 19681326 19681487 -66307447 - AluJo SINE Alu -30 282 132 1962 100 31 0 chr18 19681487 19681777 -66307157 - AluSx SINE Alu -13 299 1 1276 168 31 62 chr18 19681777 19681906 -66307028 - AluJo SINE Alu -180 132 1 2126 214 166 23 chr18 19682089 19682618 -66306316 + MLT2F LTR ERVL 3 621 -42 195 42 0 0 chr18 19682618 19682642 -66306292 + (TG)n Simple_repeat Simple_repeat 2 25 0 2126 214 166 23 chr18 19682642 19682683 -66306251 + MLT2F LTR ERVL 621 655 -8 681 249 99 50 chr18 19682758 19683218 -66305716 - MLT1H LTR MaLR 0 549 27 180 282 35 71 chr18 19683324 19683409 -66305525 + L2 LINE L2 3220 3301 -12 1002 164 0 6 chr18 19683695 19683860 -66305074 - FRAM SINE Alu -11 165 2 471 118 0 0 chr18 19683861 19683946 -66304988 + (TTTC)n Simple_repeat Simple_repeat 4 88 0 347 243 27 99 chr18 19684049 19684160 -66304774 - L1M4 LINE L1 -1142 5004 4902 1753 55 5 0 chr18 19684188 19684406 -66304528 - AluY SINE Alu -10 301 83 211 253 143 44 chr18 19684786 19684877 -66304057 - MIR3 SINE MIR -36 172 73 * 326 318 73 82 chr18 19684869 19685237 -66303697 + L2 LINE L2 2237 2601 -713 704 126 0 0 chr18 19685259 19685354 -66303580 - MER30 DNA MER1_type -1 229 135 1066 110 32 0 chr18 19685354 19685508 -66303426 + AluSg/x SINE Alu 129 287 -23 868 81 65 0 chr18 19685520 19685644 -66303290 - MER30 DNA MER1_type -96 134 3 361 362 17 17 chr18 19685648 19685825 -66303109 + L2 LINE L2 2607 2783 -531 294 337 137 0 chr18 19685955 19686050 -66302884 + L2 LINE L2 3125 3232 -40 1998 135 3 6 chr18 19686280 19686592 -66302342 + AluSx SINE Alu 1 311 -1 207 247 55 27 chr18 19686750 19686823 -66302111 + L2 LINE L2 2344 2418 -896 200 333 0 0 chr18 19687001 19687058 -66301876 + (TG)n Simple_repeat Simple_repeat 2 58 0 192 209 134 15 chr18 19687058 19687125 -66301809 + L2 LINE L2 2969 3043 -229 277 264 25 91 chr18 19687187 19687308 -66301626 + L2 LINE L2 3151 3263 -9 2234 80 0 19 chr18 19687433 19687747 -66301187 - AluY SINE Alu 0 311 4 1907 138 7 3 chr18 19687751 19688047 -66300887 - AluSx SINE Alu -15 297 1 393 65 16 32 chr18 19688492 19688554 -66300380 + U7 snRNA snRNA 2 62 -1 217 246 0 0 chr18 19688559 19688616 -66300318 + A-rich Low_complexity Low_complexity 1 57 0 407 68 17 0 chr18 19690324 19690383 -66298551 + (GA)n Simple_repeat Simple_repeat 1 60 0 604 304 40 0 chr18 19691140 19691288 -66297646 + MIR SINE MIR 38 191 -71 231 295 115 0 chr18 19691774 19691852 -66297082 + L2 LINE L2 3169 3255 -58 569 290 12 6 chr18 19691878 19692040 -66296894 - MIR SINE MIR -19 243 81 226 341 92 12 chr18 19692146 19692310 -66296624 - MIR SINE MIR -12 250 74 1846 123 25 4 chr18 19692323 19692600 -66296334 + AluSx SINE Alu 1 283 -29 242 253 36 24 chr18 19693391 19693474 -66295460 + MIR SINE MIR 82 165 -97 474 191 0 0 chr18 19693857 19693941 -66294993 + AluJ/FLAM SINE Alu 12 95 -217 207 139 0 0 chr18 19693996 19694032 -66294902 + (CATATA)n Simple_repeat Simple_repeat 5 40 0 819 156 7 39 chr18 19694898 19695052 -66293882 + FAM SINE Alu 10 158 -27 207 0 0 0 chr18 19695052 19695075 -66293859 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1698 156 12 40 chr18 19695112 19695246 -66293688 + AluSx SINE Alu 1 137 -175 2109 54 3 48 chr18 19695246 19695565 -66293369 + AluY SINE Alu 1 306 0 1698 156 12 40 chr18 19695565 19695750 -66293184 + AluSx SINE Alu 137 312 0 243 261 206 2 chr18 19696578 19696747 -66292187 + MIR SINE MIR 7 244 -18 239 157 0 129 chr18 19697002 19697072 -66291862 - MLT1H LTR MaLR -2 592 487 2505 28 3 31 chr18 19697072 19697390 -66291544 - AluY SINE Alu -2 309 1 2113 117 0 0 chr18 19697390 19697690 -66291244 - AluSg SINE Alu -10 300 1 736 209 0 14 chr18 19697690 19697838 -66291096 - FRAM SINE Alu -30 146 1 1131 267 105 33 chr18 19697839 19698296 -66290638 - MLT1H LTR MaLR -55 494 5 236 254 167 22 chr18 19698300 19698438 -66290496 - MLT1H-int LTR MaLR 0 1371 1214 1989 143 0 10 chr18 19698532 19698846 -66290088 + AluSx SINE Alu 1 311 -1 1855 116 24 7 chr18 19698975 19699267 -66289667 - AluSp SINE Alu -16 297 1 2226 78 0 14 chr18 19700030 19700354 -66288580 + AluSq SINE Alu 1 313 0 1881 133 0 0 chr18 19700439 19700717 -66288217 + AluSx SINE Alu 14 291 -21 292 242 44 22 chr18 19700729 19700820 -66288114 - MLT1H-int LTR MaLR -1642 93 1 305 261 0 0 chr18 19700820 19700889 -66288045 - MLT1H LTR MaLR 0 549 481 693 164 0 0 chr18 19700889 19700999 -66287935 + FLAM_A SINE Alu 1 110 -32 204 40 0 0 chr18 19701006 19701031 -66287903 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1234 264 60 50 chr18 19701031 19701513 -66287421 - MLT1H LTR MaLR -62 487 1 2332 67 3 30 chr18 19701670 19701968 -66286966 - AluY SINE Alu -15 296 7 2298 116 0 3 chr18 19702476 19702786 -66286148 + AluSc SINE Alu 1 309 0 866 231 5 19 chr18 19703505 19703717 -66285217 + MIR SINE MIR 8 216 -46 743 139 90 0 chr18 19703748 19703906 -66285028 + FLAM_C SINE Alu 1 169 0 1871 143 70 0 chr18 19703915 19704202 -66284732 + AluSg SINE Alu 1 307 -3 30 27 0 0 chr18 19704369 19704406 -66284528 + AT_rich Low_complexity Low_complexity 1 37 0 2003 128 0 7 chr18 19704716 19705004 -66283930 + AluJb SINE Alu 5 290 -22 23 0 0 0 chr18 19705011 19705034 -66283900 + AT_rich Low_complexity Low_complexity 1 23 0 2128 101 10 39 chr18 19706139 19706445 -66282489 - AluSx SINE Alu -15 297 1 1010 158 0 12 chr18 19706818 19706983 -66281951 - FRAM SINE Alu -1 165 3 618 143 4 2 chr18 19707102 19707346 -66281588 + AluJo SINE Alu 1 299 -13 394 304 104 0 chr18 19707579 19707714 -66281220 + L2 LINE L2 3124 3272 0 282 236 56 11 chr18 19707900 19707989 -66280945 - L2 LINE L2 -6 3307 3215 565 202 258 66 chr18 19708897 19709095 -66279839 - MIR SINE MIR 0 262 27 2646 48 0 10 chr18 19709173 19709487 -66279447 + AluY SINE Alu 1 311 0 2417 84 0 3 chr18 19709522 19709819 -66279115 + AluSg SINE Alu 1 296 -14 1804 142 38 7 chr18 19710187 19710475 -66278459 + AluSx SINE Alu 1 297 -15 257 69 35 86 chr18 19710593 19710651 -66278283 + Alu SINE Alu 248 302 0 830 183 99 167 chr18 19711640 19712149 -66276785 + AluJo SINE Alu 2 488 0 442 156 55 16 chr18 19712174 19712302 -66276632 + GA-rich Low_complexity Low_complexity 3 135 0 285 250 250 9 chr18 19713072 19713188 -66275746 - MIR SINE MIR -111 151 8 1574 154 82 21 chr18 19713559 19713838 -66275096 + AluJb SINE Alu 1 296 -16 24 53 0 0 chr18 19713999 19714037 -66274897 + AT_rich Low_complexity Low_complexity 1 38 0 1693 156 48 24 chr18 19714226 19714521 -66274413 - AluSx SINE Alu 0 312 11 2121 102 0 71 chr18 19714599 19714922 -66274012 + AluSq SINE Alu 1 300 -13 1694 150 3 59 chr18 19714994 19715301 -66273633 + AluSx SINE Alu 5 294 -18 1192 205 139 53 chr18 19715325 19715837 -66273097 + L1MC5 LINE L1 6907 7462 -499 400 206 52 22 chr18 19715916 19715988 -66272946 + L1MC5 LINE L1 7605 7673 -288 2342 73 0 35 chr18 19715988 19716301 -66272633 - AluY SINE Alu -9 302 1 400 206 52 22 chr18 19716301 19716364 -66272570 + L1MC5 LINE L1 7673 7744 -217 686 155 39 23 chr18 19716435 19716564 -66272370 - FLAM_A SINE Alu -4 138 8 538 309 117 0 chr18 19716751 19716981 -66271953 + L1ME LINE L1 5512 5768 -353 2357 228 35 59 chr18 19717334 19717492 -66271442 - L1ME3A LINE L1 -83 6087 5930 878 269 31 98 chr18 19717492 19717659 -66271275 - L1MA7 LINE L1 -364 5927 5750 2053 142 0 7 chr18 19717659 19717954 -66270980 - AluSx SINE Alu -19 293 1 878 269 31 98 chr18 19717954 19718293 -66270641 - L1MA7 LINE L1 -541 5750 5390 2307 101 0 3 chr18 19718293 19718599 -66270335 - AluSx SINE Alu -7 305 1 878 269 31 98 chr18 19718599 19718691 -66270243 - L1MA7 LINE L1 -901 5390 5293 879 0 27 0 chr18 19718691 19718802 -66270132 + (TAGA)n Simple_repeat Simple_repeat 4 117 0 2141 120 3 3 chr18 19718802 19719094 -66269840 - AluSx SINE Alu -18 294 3 878 269 31 98 chr18 19719094 19719146 -66269788 - L1MA7 LINE L1 -919 5372 5318 578 250 8 0 chr18 19719177 19719297 -66269637 - FLAM_A SINE Alu -12 121 1 258 203 62 47 chr18 19719299 19719427 -66269507 - L1ME3A LINE L1 -814 5332 5203 352 203 0 0 chr18 19719427 19719491 -66269443 + L1MA4 LINE L1 4039 4102 -2044 577 91 0 216 chr18 19719498 19719545 -66269389 + L1MB1 LINE L1 5692 5747 -442 1303 181 112 35 chr18 19719545 19719832 -66269102 + AluJb SINE Alu 1 309 -3 577 91 0 216 chr18 19719832 19719897 -66269037 + L1MB1 LINE L1 5747 5755 -434 805 186 0 0 chr18 19719897 19720026 -66268908 + FLAM_A SINE Alu 4 132 -1 577 91 0 216 chr18 19720026 19720088 -66268846 + L1MB1 LINE L1 5755 5829 -360 806 181 7 0 chr18 19720109 19720247 -66268687 - FLAM_C SINE Alu -4 139 1 1547 166 61 3 chr18 19720247 19720543 -66268391 + L1MA9 LINE L1 5816 6128 -184 603 151 19 0 chr18 19720545 19720651 -66268283 - LTR54 LTR ERV1 0 510 403 6882 149 23 37 chr18 19720652 19721268 -66267666 + L1MA4 LINE L1 4092 4715 -1585 1971 143 3 10 chr18 19721268 19721576 -66267358 + AluJb SINE Alu 5 310 -2 6882 149 23 37 chr18 19721576 19723015 -66265919 + L1MA4 LINE L1 4715 6129 -171 2025 114 0 33 chr18 19723015 19723322 -66265612 + AluSx SINE Alu 1 297 -15 6882 149 23 37 chr18 19723322 19723490 -66265444 + L1MA4 LINE L1 6129 6298 -2 26 30 0 0 chr18 19723580 19723613 -66265321 + AT_rich Low_complexity Low_complexity 1 33 0 644 216 0 37 chr18 19723619 19723753 -66265181 - FLAM_A SINE Alu -1 132 4 2128 137 0 3 chr18 19723833 19724132 -66264802 - AluSx SINE Alu -14 298 1 2235 115 3 0 chr18 19724695 19725000 -66263934 + AluSx SINE Alu 1 306 -6 26 0 0 0 chr18 19725032 19725058 -66263876 + AT_rich Low_complexity Low_complexity 1 26 0 2428 98 0 3 chr18 19725133 19725439 -66263495 + AluSg SINE Alu 1 305 -5 852 183 0 0 chr18 19726045 19726182 -66262752 - FRAM SINE Alu -11 165 29 1976 150 20 7 chr18 19727148 19727454 -66261480 + AluJo SINE Alu 1 310 -2 503 128 12 0 chr18 19727490 19727576 -66261358 + GA-rich Low_complexity Low_complexity 2 88 0 207 196 137 0 chr18 19727890 19727941 -66260993 - MER5B DNA MER1_type -120 58 1 275 0 0 28 chr18 19728775 19728811 -66260123 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2226 114 0 0 chr18 19729136 19729435 -66259499 + AluSg SINE Alu 1 299 -11 400 283 60 73 chr18 19729848 19729977 -66258957 + MIR SINE MIR 20 146 -116 2193 117 0 7 chr18 19729977 19730284 -66258650 + AluSq SINE Alu 1 305 -8 400 283 60 73 chr18 19730284 19730387 -66258547 + MIR SINE MIR 146 249 -13 384 103 0 0 chr18 19730443 19730501 -66258433 + (TA)n Simple_repeat Simple_repeat 2 59 0 636 209 0 0 chr18 19731080 19731190 -66257744 + FLAM_A SINE Alu 13 122 -20 1627 142 4 0 chr18 19731813 19732073 -66256861 - AluSx SINE Alu 0 311 51 463 271 31 0 chr18 19732079 19732208 -66256726 - MIR SINE MIR -74 188 56 1924 114 8 0 chr18 19732679 19732941 -66255993 + AluSx SINE Alu 26 289 -23 21 43 0 22 chr18 19733710 19733726 -66255208 + AT_rich Low_complexity Low_complexity 1 16 -29 1767 151 34 34 chr18 19733726 19734024 -66254910 + AluJb SINE Alu 1 298 -14 21 43 0 22 chr18 19734024 19734053 -66254881 + AT_rich Low_complexity Low_complexity 16 45 0 2229 117 17 0 chr18 19734639 19734938 -66253996 - AluSx SINE Alu -8 304 1 189 250 141 11 chr18 19735119 19735211 -66253723 + MIR SINE MIR 132 235 -27 324 318 75 23 chr18 19735812 19735854 -66253080 - MIR SINE MIR -67 195 157 769 144 8 8 chr18 19735854 19735979 -66252955 + FLAM_C SINE Alu 1 125 -8 324 318 75 23 chr18 19735979 19736109 -66252825 - MIR SINE MIR -105 157 14 201 94 0 0 chr18 19736233 19736265 -66252669 + (TG)n Simple_repeat Simple_repeat 1 32 0 235 229 0 0 chr18 19736427 19736475 -66252459 - L1MA9 LINE L1 0 6312 6265 1838 181 0 0 chr18 19736476 19736763 -66252171 + AluJo SINE Alu 1 287 -25 1933 137 56 0 chr18 19736789 19737073 -66251861 + AluJb SINE Alu 1 300 -12 2395 168 21 17 chr18 19737114 19737138 -66251796 - L1MA9 LINE L1 -21 6291 6269 1811 153 25 57 chr18 19737138 19737353 -66251581 - MER2 DNA MER2_type -1 343 141 1538 99 0 5 chr18 19737353 19737589 -66251345 + AluSg/x SINE Alu 83 317 0 1811 153 25 57 chr18 19737589 19737726 -66251208 - MER2 DNA MER2_type -203 141 1 2395 168 21 17 chr18 19737726 19738181 -66250753 - L1MA9 LINE L1 -43 6269 5806 247 127 182 0 chr18 19738369 19738424 -66250510 + MIR SINE MIR 111 175 -87 240 299 10 21 chr18 19739456 19739553 -66249381 + MIR SINE MIR 10 105 -157 1003 185 0 0 chr18 19739612 19739774 -66249160 - FRAM SINE Alu -3 163 2 292 243 14 0 chr18 19739776 19739846 -66249088 + MIR SINE MIR 119 189 -73 763 173 0 81 chr18 19740733 19740770 -66248164 - L1MA4 LINE L1 0 6300 6262 1810 155 30 24 chr18 19740770 19741067 -66247867 + AluJb SINE Alu 1 299 -13 763 173 0 81 chr18 19741067 19741226 -66247708 - L1MA4 LINE L1 -38 6262 6120 1472 242 61 38 chr18 19741353 19741609 -66247325 + L2 LINE L2 2446 2695 -618 2184 92 14 0 chr18 19741609 19741923 -66247011 + AluSq SINE Alu 1 318 0 1472 242 61 38 chr18 19741923 19742496 -66246438 + L2 LINE L2 2695 3290 -23 389 263 103 32 chr18 19742583 19742737 -66246197 + MIR SINE MIR 35 210 -52 2120 107 43 0 chr18 19742737 19743018 -66245916 + AluSx SINE Alu 1 293 -19 389 263 103 32 chr18 19743018 19743076 -66245858 + MIR SINE MIR 210 262 0 216 214 0 0 chr18 19743076 19743118 -66245816 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1994 140 0 29 chr18 19743754 19744069 -66244865 + AluJo SINE Alu 1 306 -6 264 59 0 0 chr18 19744987 19745021 -66243913 + (CA)n Simple_repeat Simple_repeat 2 35 0 1859 184 0 0 chr18 19745080 19745386 -66243548 + AluJo SINE Alu 1 306 0 185 263 0 35 chr18 19745387 19745444 -66243490 - L3 LINE CR1 -600 977 923 2206 108 3 0 chr18 19745963 19746250 -66242684 - AluSx SINE Alu -24 288 1 817 171 0 0 chr18 19746292 19746421 -66242513 - FLAM_C SINE Alu -4 129 1 349 305 16 16 chr18 19746486 19746614 -66242320 + MIR3 SINE MIR 74 201 -7 2130 122 0 26 chr18 19746756 19747068 -66241866 + AluSx SINE Alu 1 304 -8 2243 107 0 0 chr18 19748946 19749227 -66239707 + AluSx SINE Alu 1 281 -31 232 170 36 18 chr18 19750623 19750735 -66238199 + (TATAA)n Simple_repeat Simple_repeat 5 118 0 210 125 28 69 chr18 19750981 19751053 -66237881 + (TTATA)n Simple_repeat Simple_repeat 1 69 0 817 180 0 0 chr18 19751072 19751200 -66237734 - FLAM_C SINE Alu -15 128 1 1661 111 0 0 chr18 19751219 19751435 -66237499 + AluSg/x SINE Alu 82 297 -15 644 116 0 0 chr18 19752458 19752544 -66236390 + FLAM_C SINE Alu 31 116 -27 748 283 64 14 chr18 19753489 19753772 -66235162 + LTR33A LTR ERVL 220 516 -7 1905 145 40 0 chr18 19755212 19755509 -66233425 - AluJo SINE Alu -3 309 1 2120 102 28 7 chr18 19755518 19755824 -66233110 - AluSp SINE Alu 0 313 1 25 0 0 0 chr18 19755824 19755849 -66233085 + AT_rich Low_complexity Low_complexity 1 25 0 2083 134 0 3 chr18 19755849 19756139 -66232795 - AluSx SINE Alu -23 289 1 2191 103 0 0 chr18 19756655 19756926 -66232008 + AluSg SINE Alu 1 271 -39 2311 97 20 3 chr18 19758430 19758730 -66230204 + AluSq SINE Alu 1 305 -8 189 0 0 0 chr18 19758736 19758757 -66230177 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 946 129 0 0 chr18 19758858 19758990 -66229944 + AluSq/x SINE Alu 1 132 -180 2304 112 0 0 chr18 19759031 19759334 -66229600 + AluSx SINE Alu 3 305 -7 1743 155 76 48 chr18 19759807 19759948 -66228986 + MLT1A1 LTR MaLR 1 137 -228 1751 134 45 3 chr18 19759948 19760238 -66228696 + AluSx SINE Alu 1 302 -10 1743 155 76 48 chr18 19760238 19760451 -66228483 + MLT1A1 LTR MaLR 137 365 0 1715 73 5 0 chr18 19760616 19760872 -66228062 - AluSp SINE Alu 0 334 78 2398 106 0 0 chr18 19760930 19761242 -66227692 - AluSx SINE Alu 0 312 1 279 257 68 0 chr18 19761357 19761431 -66227503 + MIR3 SINE MIR 97 175 -33 2027 132 3 25 chr18 19762489 19762808 -66226126 + AluSx SINE Alu 1 312 0 2218 108 13 7 chr18 19763274 19763579 -66225355 + AluY SINE Alu 1 307 -4 1243 62 23 0 chr18 19763592 19763768 -66225166 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2285 114 3 0 chr18 19763822 19764128 -66224806 + AluSq SINE Alu 1 307 -6 228 154 19 39 chr18 19764154 19764206 -66224728 + L2 LINE L2 3263 3313 0 2262 116 3 0 chr18 19764398 19764701 -66224233 + AluSx SINE Alu 2 305 -7 3562 152 21 2 chr18 19764880 19765500 -66223434 + L1MA4 LINE L1 5665 6296 -4 1345 148 0 5 chr18 19765972 19766196 -66222738 + AluJo SINE Alu 86 308 0 201 274 97 48 chr18 19766872 19766996 -66221938 - L2 LINE L2 -5 3267 3138 209 299 85 49 chr18 19767601 19767765 -66221169 - L2 LINE L2 -1408 1906 1737 379 326 98 0 chr18 19767918 19768102 -66220832 - MIR SINE MIR -60 202 1 201 286 43 0 chr18 19768469 19768539 -66220395 + MIR SINE MIR 188 260 -2 1738 142 60 33 chr18 19768937 19769239 -66219695 + AluSg SINE Alu 1 310 0 1701 148 48 10 chr18 19769560 19769851 -66219083 + AluJo SINE Alu 11 312 0 2391 90 3 0 chr18 19769892 19770193 -66218741 - AluSq SINE Alu -11 302 1 222 322 102 17 chr18 19770537 19770655 -66218279 - L2 LINE L2 -8 3264 3137 368 365 17 6 chr18 19770769 19770947 -66217987 - L2 LINE L2 -480 2834 2655 932 102 0 23 chr18 19771119 19771247 -66217687 + FLAM_C SINE Alu 6 130 -13 1242 90 0 0 chr18 19773163 19773374 -66215560 + (TTC)n Simple_repeat Simple_repeat 1 211 0 1558 167 0 97 chr18 19773380 19773709 -66215225 - AluJb SINE Alu -3 299 3 24 32 0 0 chr18 19774563 19774594 -66214340 + AT_rich Low_complexity Low_complexity 1 31 0 617 202 17 8 chr18 19774594 19774713 -66214221 - FLAM_A SINE Alu -12 121 2 1867 115 3 115 chr18 19774841 19775365 -66213569 - AluSx SINE Alu 0 486 1 879 177 12 6 chr18 19775835 19775999 -66212935 - AluJb SINE Alu -10 302 138 466 177 0 0 chr18 19776414 19776493 -66212441 + FLAM_A SINE Alu 18 96 -46 223 177 32 16 chr18 19776519 19776581 -66212353 + GA-rich Low_complexity Low_complexity 2 64 0 2284 68 0 0 chr18 19776751 19777016 -66211918 - AluSq SINE Alu -48 265 1 653 203 6 32 chr18 19777671 19777829 -66211105 + L2 LINE L2 2387 2540 -774 496 129 0 0 chr18 19777830 19777900 -66211034 + AluJb SINE Alu 211 280 -32 422 192 150 30 chr18 19777914 19778081 -66210853 + L2 LINE L2 2533 2719 -595 2184 112 13 19 chr18 19778081 19778430 -66210504 + AluJb SINE Alu 1 347 0 232 287 21 0 chr18 19778440 19778534 -66210400 + L2 LINE L2 2709 2804 -510 2350 120 0 0 chr18 19779115 19779424 -66209510 + AluSx SINE Alu 1 309 -3 1787 124 90 0 chr18 19780593 19780860 -66208074 + AluSx SINE Alu 1 291 -21 327 252 37 28 chr18 19780996 19781103 -66207831 + MIR SINE MIR 6 113 -149 209 227 0 0 chr18 19781118 19781162 -66207772 + MIR SINE MIR 219 262 0 609 227 55 142 chr18 19781434 19781513 -66207421 + L2 LINE L2 2467 2551 -762 820 129 0 64 chr18 19781513 19781653 -66207281 + FLAM_C SINE Alu 2 132 -1 609 227 55 142 chr18 19781653 19782348 -66206586 + L2 LINE L2 2551 3223 -90 1956 130 27 17 chr18 19782453 19782746 -66206188 - AluSx SINE Alu -16 296 1 523 83 0 0 chr18 19782757 19782829 -66206105 - AluSc SINE Alu -6 303 232 2127 94 6 72 chr18 19782851 19783182 -66205752 + AluSg SINE Alu 1 309 -1 2259 99 27 0 chr18 19783504 19783798 -66205136 + AluSq SINE Alu 1 302 -11 463 231 113 12 chr18 19783940 19784100 -66204834 + HAL1 LINE L1 1181 1356 -1151 2083 108 17 20 chr18 19784100 19784397 -66204537 + AluSc SINE Alu 1 296 -13 757 153 0 0 chr18 19784418 19784536 -66204398 + AluJo/FLAM SINE Alu 2 119 -193 1065 156 24 14 chr18 19784536 19784747 -66204187 - AluSg/x SINE Alu -8 302 90 22 0 0 0 chr18 19784848 19784870 -66204064 + AT_rich Low_complexity Low_complexity 1 22 0 1811 285 74 31 chr18 19784885 19785516 -66203418 + HAL1 LINE L1 1363 2050 -457 2270 113 3 0 chr18 19785516 19785818 -66203116 - AluSp SINE Alu -10 303 1 1811 285 74 31 chr18 19785818 19786140 -66202794 + HAL1 LINE L1 2050 2357 -150 * 2881 248 74 101 chr18 19786137 19787378 -66201556 + L1MEc LINE L1 35 1307 -5089 1615 205 0 10 chr18 19787378 19787671 -66201263 - AluJo SINE Alu -22 290 1 2881 248 74 101 chr18 19787671 19788277 -66200657 + L1MEc LINE L1 1307 1806 -4590 2203 124 0 3 chr18 19788277 19788576 -66200358 + AluSg SINE Alu 1 298 -12 2881 248 74 101 chr18 19788576 19789132 -66199802 + L1MEc LINE L1 1806 2375 -4021 419 239 107 6 chr18 19789110 19789269 -66199665 + HAL1 LINE L1 2382 2556 -20 * 692 193 0 0 chr18 19789379 19789498 -66199436 + AluJo/FLAM SINE Alu 3 121 -191 1945 142 27 0 chr18 19789499 19789794 -66199140 - AluSq SINE Alu -10 303 1 411 266 49 119 chr18 19789946 19790333 -66198601 - L2 LINE L2 -434 2880 2521 1926 223 17 28 chr18 19790471 19790938 -66197996 - MLT1C LTR MaLR 0 467 6 263 62 0 0 chr18 19791329 19791361 -66197573 - Alu SINE Alu -254 46 15 3407 67 2 2 chr18 19791444 19791877 -66197057 + L1PA6 LINE L1 5714 6146 -8 23 0 0 0 chr18 19791878 19791901 -66197033 + AT_rich Low_complexity Low_complexity 1 23 0 219 308 68 8 chr18 19791932 19792049 -66196885 + MIR SINE MIR 121 244 -18 1355 173 66 95 chr18 19792165 19792512 -66196422 + MLT1A2 LTR MaLR 1 337 -37 308 149 0 15 chr18 19792916 19792983 -66195951 + (CA)n Simple_repeat Simple_repeat 1 66 0 206 355 9 55 chr18 19793539 19793649 -66195285 - MIR3 SINE MIR -25 183 79 856 239 21 29 chr18 19794238 19794476 -66194458 + L1ME1 LINE L1 5922 6157 -9 659 275 91 42 chr18 19794696 19795027 -66193907 + MLT1I LTR MaLR 63 409 0 26 0 0 0 chr18 19795268 19795294 -66193640 + AT_rich Low_complexity Low_complexity 1 26 0 234 334 103 47 chr18 19797488 19797829 -66191105 + MARNA DNA Mariner 31 390 -196 21 0 0 0 chr18 19798019 19798040 -66190894 + AT_rich Low_complexity Low_complexity 1 21 0 299 357 0 0 chr18 19798288 19798372 -66190562 + L2 LINE L2 3160 3243 -29 16954 32 0 1 chr18 19800040 19802051 -66186883 + L1P LINE L1 3029 5038 -1108 23 0 0 0 chr18 19802592 19802615 -66186319 + AT_rich Low_complexity Low_complexity 1 23 0 1899 116 28 0 chr18 19804079 19804363 -66184571 + MER61A-int LTR ERV1 4926 5217 0 1940 179 18 9 chr18 19804363 19804703 -66184231 + MER61A LTR ERV1 1 343 0 1304 120 0 0 chr18 19804704 19804887 -66184047 + MER49 LTR ERV1 112 294 -629 1292 219 26 5 chr18 19804907 19805186 -66183748 + MER4D LTR ERV1 326 525 -85 303 191 44 0 chr18 19805397 19805465 -66183469 + MER4D LTR ERV1 824 894 -9 207 256 116 23 chr18 19805638 19805724 -66183210 + L2 LINE L2 3179 3272 0 560 278 140 53 chr18 19806109 19806465 -66182469 - L2 LINE L2 0 3313 2927 2045 99 0 0 chr18 19809806 19810079 -66178855 + AluSx SINE Alu 1 273 -39 581 100 0 0 chr18 19810380 19810460 -66178474 + MADE1 DNA Mariner 1 80 0 825 267 48 38 chr18 19810632 19811003 -66177931 - L1ME4a LINE L1 -225 5896 5522 1881 161 0 3 chr18 19811383 19811694 -66177240 + AluJb SINE Alu 3 312 0 240 294 111 8 chr18 19811947 19812073 -66176861 + L2 LINE L2 3103 3241 -31 382 229 263 62 chr18 19812344 19812416 -66176518 - MIR SINE MIR -32 230 174 1748 108 50 4 chr18 19812416 19812693 -66176241 - AluSx SINE Alu -22 290 1 382 229 263 62 chr18 19812693 19812799 -66176135 - MIR SINE MIR -88 174 16 328 306 65 0 chr18 19813890 19813998 -66174936 - MIR SINE MIR -100 162 48 1907 114 19 16 chr18 19814049 19814357 -66174577 - AluSg SINE Alu -1 309 1 275 0 0 28 chr18 19814682 19814718 -66174216 + (CAA)n Simple_repeat Simple_repeat 2 36 0 231 196 137 0 chr18 19815552 19815603 -66173331 + MER5B DNA MER1_type 1 58 -120 543 151 8 17 chr18 19815917 19816036 -66172898 + CT-rich Low_complexity Low_complexity 3 120 0 1862 150 20 7 chr18 19816039 19816345 -66172589 - AluJo SINE Alu -2 310 1 258 81 0 0 chr18 19817445 19817482 -66171452 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 2050 118 10 3 chr18 19817913 19818209 -66170725 + AluSq SINE Alu 1 298 -15 839 225 115 12 chr18 19818763 19819016 -66169918 + MLT1C LTR MaLR 187 465 -2 24 32 0 0 chr18 19819421 19819452 -66169482 + AT_rich Low_complexity Low_complexity 1 31 0 803 118 0 92 chr18 19820562 19820715 -66168219 + FLAM_C SINE Alu 2 140 -3 261 183 117 17 chr18 19820841 19820901 -66168033 - MIR3 SINE MIR -54 154 89 209 165 38 51 chr18 19821152 19821280 -66167654 + (TTATA)n Simple_repeat Simple_repeat 1 126 0 186 71 0 0 chr18 19821513 19821541 -66167393 + (GGCTG)n Simple_repeat Simple_repeat 4 31 0 296 247 0 0 chr18 19824812 19824889 -66164045 + (TG)n Simple_repeat Simple_repeat 1 77 0 284 236 225 60 chr18 19825059 19825241 -66163693 + MIR SINE MIR 11 222 -40 242 162 48 152 chr18 19825807 19825912 -66163022 - L2 LINE L2 -1 3312 3219 254 263 90 98 chr18 19826640 19826773 -66162161 + MIR SINE MIR 107 238 -24 271 305 80 98 chr18 19826815 19827537 -66161397 + L2 LINE L2 2287 2995 -277 1582 97 5 0 chr18 19827572 19827788 -66161146 + AluSq SINE Alu 1 217 -96 454 324 114 35 chr18 19829895 19830668 -66158266 + L2 LINE L2 2429 3271 -1 562 270 146 22 chr18 19831100 19831326 -66157608 + MIR SINE MIR 9 262 0 199 250 12 12 chr18 19831385 19831465 -66157469 + (CATATA)n Simple_repeat Simple_repeat 2 81 0 972 182 45 0 chr18 19831474 19831650 -66157284 - MIR SINE MIR -62 200 17 246 207 186 32 chr18 19832459 19832568 -66156366 + MIR SINE MIR 37 161 -64 574 276 43 18 chr18 19832785 19832948 -66155986 - MIR SINE MIR -31 231 65 449 348 89 28 chr18 19833003 19833119 -66155815 - MIR SINE MIR 0 262 154 1806 157 3 0 chr18 19833119 19833419 -66155515 + AluJo SINE Alu 2 302 -10 449 348 89 28 chr18 19833419 19833549 -66155385 - MIR SINE MIR -108 154 1 264 264 47 28 chr18 19833549 19833636 -66155298 + MIR SINE MIR 173 261 -1 1325 165 38 130 chr18 19833664 19834034 -66154900 - MLT1E LTR MaLR -1 592 257 442 210 36 116 chr18 19834152 19834189 -66154745 - MER58A DNA MER1_type -214 127 89 1656 191 7 0 chr18 19834189 19834492 -66154442 + AluJo SINE Alu 1 305 -7 442 210 36 116 chr18 19834492 19834528 -66154406 - MER58A DNA MER1_type -252 89 52 1854 136 3 3 chr18 19834528 19834823 -66154111 - AluSx SINE Alu -16 296 2 442 210 36 116 chr18 19834823 19834886 -66154048 - MER58A DNA MER1_type -289 52 1 1629 113 12 4 chr18 19835077 19835333 -66153601 - AluSx SINE Alu -16 296 39 652 170 10 0 chr18 19835661 19835761 -66153173 + FLAM_A SINE Alu 12 112 -30 321 26 0 0 chr18 19835763 19835801 -66153133 + (CA)n Simple_repeat Simple_repeat 1 38 0 1647 174 14 0 chr18 19835852 19835993 -66152941 + AluJb SINE Alu 1 139 -173 2153 110 0 3 chr18 19835993 19836293 -66152641 + AluSx SINE Alu 1 299 -13 1647 174 14 0 chr18 19836293 19836445 -66152489 + AluJb SINE Alu 139 298 -14 189 0 0 0 chr18 19836655 19836676 -66152258 + (TA)n Simple_repeat Simple_repeat 1 21 0 784 154 33 82 chr18 19837452 19837634 -66151300 + L1MB3 LINE L1 5659 5831 -352 860 145 0 15 chr18 19837644 19837775 -66151159 - FLAM_C SINE Alu -4 129 1 1242 89 0 0 chr18 19837824 19837982 -66150952 + AluSq SINE Alu 4 161 -152 1114 124 51 0 chr18 19838012 19838189 -66150745 + AluSg/x SINE Alu 118 303 -7 839 212 47 18 chr18 19838732 19838902 -66150032 + FAM SINE Alu 1 175 0 716 269 127 60 chr18 19838975 19839473 -66149461 + L1ME3A LINE L1 5328 5858 -312 1558 163 32 7 chr18 19839783 19839906 -66149028 + AluJb SINE Alu 1 119 -193 279 0 0 0 chr18 19839906 19839937 -66148997 + (CAA)n Simple_repeat Simple_repeat 2 32 0 1558 163 32 7 chr18 19839937 19840095 -66148839 + AluJb SINE Alu 119 289 -23 773 152 0 24 chr18 19840487 19840612 -66148322 - FLAM_C SINE Alu -16 127 6 757 253 58 29 chr18 19840612 19840889 -66148045 - L1MC/D LINE L1 -1992 5816 5532 2104 105 3 3 chr18 19841572 19841867 -66147067 - AluSx SINE Alu -17 295 1 44 16 0 16 chr18 19841870 19841917 -66147017 + AT_rich Low_complexity Low_complexity 1 48 -13 1716 144 7 14 chr18 19841917 19842208 -66146726 - AluJb SINE Alu -23 289 1 44 16 0 16 chr18 19842208 19842222 -66146712 + AT_rich Low_complexity Low_complexity 48 61 0 742 158 0 9 chr18 19842234 19842348 -66146586 - FLAM_C SINE Alu -25 118 6 1115 134 0 0 chr18 19842364 19842535 -66146399 - L1PA16 LINE L1 -2 6164 5994 2087 111 0 3 chr18 19842777 19843075 -66145859 + AluSx SINE Alu 1 297 -15 1984 124 0 7 chr18 19843339 19843638 -66145296 + AluSx SINE Alu 1 297 -15 2351 153 9 36 chr18 19843746 19844044 -66144890 + Tigger2a DNA MER2_type 1 285 -2423 1996 124 0 26 chr18 19844044 19844351 -66144583 - AluSx SINE Alu -13 299 1 2351 153 9 36 chr18 19844351 19844498 -66144436 + Tigger2a DNA MER2_type 285 434 0 1880 157 0 0 chr18 19844611 19844905 -66144029 + AluJb SINE Alu 1 294 -18 363 296 74 39 chr18 19844966 19845169 -66143765 - MIR SINE MIR 0 262 53 197 244 0 0 chr18 19845501 19845542 -66143392 - L3b LINE CR1 0 1583 1543 737 51 10 0 chr18 19845802 19845900 -66143034 - L1PA4 LINE L1 0 6155 6057 2281 78 3 0 chr18 19845900 19846193 -66142741 - AluSc SINE Alu -15 294 1 1830 141 6 19 chr18 19846193 19846505 -66142429 - AluJb SINE Alu -4 308 1 1131 138 32 9 chr18 19846506 19846723 -66142211 - MER33 DNA MER1_type -85 239 18 212 306 105 16 chr18 19846973 19847097 -66141837 + L2 LINE L2 3179 3313 0 21 36 0 0 chr18 19848413 19848441 -66140493 + AT_rich Low_complexity Low_complexity 1 28 0 1399 185 35 0 chr18 19848443 19848702 -66140232 + AluJo SINE Alu 1 268 -44 1244 59 0 0 chr18 19848955 19849142 -66139792 + AluSg/x SINE Alu 132 318 0 2271 81 0 3 chr18 19850243 19850539 -66138395 + AluSc SINE Alu 1 295 -14 2143 96 3 0 chr18 19850796 19851089 -66137845 + AluY SINE Alu 1 294 -17 846 164 86 13 chr18 19851155 19851307 -66137627 + FAM SINE Alu 4 166 -9 3099 248 66 44 chr18 19851325 19851580 -66137354 + L1M4 LINE L1 2761 3009 -3137 2123 95 0 3 chr18 19851580 19851874 -66137060 + AluY SINE Alu 1 293 -18 3099 248 66 44 chr18 19851874 19852229 -66136705 + L1M4 LINE L1 3009 3355 -2791 2194 81 0 0 chr18 19852229 19852512 -66136422 + AluSc SINE Alu 1 283 -26 306 0 0 0 chr18 19852514 19852548 -66136386 + (CA)n Simple_repeat Simple_repeat 1 34 0 3099 248 66 44 chr18 19852548 19852609 -66136325 + L1M4 LINE L1 3355 3413 -2733 357 24 0 0 chr18 19852609 19852651 -66136283 + (CA)n Simple_repeat Simple_repeat 1 42 0 3099 248 66 44 chr18 19852651 19852710 -66136224 + L1M4 LINE L1 3413 3469 -2677 1995 159 0 10 chr18 19852710 19853024 -66135910 + AluJb SINE Alu 1 311 -1 3099 248 66 44 chr18 19853024 19853191 -66135743 + L1M4 LINE L1 3469 3631 -2515 2135 141 0 0 chr18 19853191 19853490 -66135444 - AluJb SINE Alu -13 299 1 3099 248 66 44 chr18 19853490 19854172 -66134762 + L1M4 LINE L1 3631 4419 -1727 2348 102 0 3 chr18 19854172 19854477 -66134457 + AluSg SINE Alu 1 304 -6 3099 248 66 44 chr18 19854477 19854636 -66134298 + L1M4 LINE L1 4419 4573 -1573 2051 120 6 25 chr18 19854643 19854960 -66133974 - AluSx SINE Alu -1 311 1 2347 119 0 0 chr18 19855049 19855360 -66133574 + AluSx SINE Alu 1 311 -1 1955 160 7 0 chr18 19856323 19856630 -66132304 + AluSx SINE Alu 1 309 -3 2260 117 0 0 chr18 19856747 19857046 -66131888 + AluSx SINE Alu 6 304 -8 1528 189 13 36 chr18 19857383 19857690 -66131244 - AluJb SINE Alu -12 300 1 261 225 22 79 chr18 19857737 19857826 -66131108 + MER63 DNA MER1_type 677 760 -302 2361 102 3 0 chr18 19857922 19858225 -66130709 + AluSq SINE Alu 1 304 -9 2261 94 0 11 chr18 19858543 19858851 -66130083 - AluSx SINE Alu 0 305 1 1839 155 17 10 chr18 19859896 19860193 -66128741 + AluJb SINE Alu 1 299 -13 21 0 0 0 chr18 19860232 19860253 -66128681 + AT_rich Low_complexity Low_complexity 1 21 0 2006 131 6 41 chr18 19860422 19860736 -66128198 + AluSx SINE Alu 1 303 -9 2095 153 0 0 chr18 19860848 19861149 -66127785 - AluSx SINE Alu -11 301 1 2391 190 17 2 chr18 19861159 19861627 -66127307 - L1PB4 LINE L1 0 6156 5682 2298 105 3 0 chr18 19861827 19862121 -66126813 - AluSp SINE Alu -18 295 1 1503 163 17 103 chr18 19862167 19862584 -66126350 + MLT1B LTR MaLR 4 384 -6 297 293 105 33 chr18 19863020 19863161 -66125773 - L1ME4a LINE L1 -46 6075 5946 1672 137 98 4 chr18 19863161 19863438 -66125496 - AluSx SINE Alu -9 303 1 297 293 105 33 chr18 19863438 19863630 -66125304 - L1ME4a LINE L1 -175 5946 5718 189 194 0 0 chr18 19863639 19863675 -66125259 + L3 LINE CR1 1537 1572 -5 2277 243 79 9 chr18 19863868 19864563 -66124371 - L1MC4a LINE L1 -27 7781 7038 205 309 107 0 chr18 19864800 19864884 -66124050 - MIR SINE MIR -67 141 49 1027 200 0 5 chr18 19864999 19865184 -66123750 - AluJo SINE Alu -11 301 118 2271 103 3 3 chr18 19865271 19865563 -66123371 + AluSp SINE Alu 1 292 -21 2177 124 6 22 chr18 19866257 19866572 -66122362 - AluSx SINE Alu -2 310 1 277 266 25 25 chr18 19866580 19866659 -66122275 + L2 LINE L2 3225 3303 -10 474 285 46 0 chr18 19866874 19867025 -66121909 - L1ME4a LINE L1 -259 5862 5705 2247 110 0 26 chr18 19867553 19867862 -66121072 + AluSq SINE Alu 1 301 -12 1942 148 3 7 chr18 19867864 19868168 -66120766 + AluJb SINE Alu 1 303 -9 2153 124 7 3 chr18 19869008 19869306 -66119628 - AluSp SINE Alu -14 299 1 316 312 125 24 chr18 19869710 19870216 -66118718 + MLT1K LTR MaLR 3 578 -10 614 168 7 19 chr18 19870443 19870598 -66118336 + CT-rich Low_complexity Low_complexity 4 156 0 1378 173 4 4 chr18 19870619 19870850 -66118084 - AluJb SINE Alu -1 311 81 304 244 105 0 chr18 19870917 19871003 -66117931 + MIR3 SINE MIR 110 204 -4 2125 121 0 3 chr18 19872286 19872575 -66116359 + AluSx SINE Alu 3 290 -22 876 157 0 15 chr18 19872797 19872931 -66116003 - FLAM_C SINE Alu -1 132 1 2261 94 3 26 chr18 19873171 19873478 -66115456 - AluSc SINE Alu -9 300 1 180 0 0 0 chr18 19873864 19873884 -66115050 + (TTA)n Simple_repeat Simple_repeat 3 22 0 1739 131 7 65 chr18 19873889 19874195 -66114739 - AluSx SINE Alu -24 288 1 1855 123 12 0 chr18 19874197 19874450 -66114484 - AluSx SINE Alu -17 295 40 1362 173 18 0 chr18 19874453 19874673 -66114261 - AluJo SINE Alu -17 295 72 279 296 159 0 chr18 19875237 19875369 -66113565 - L2 LINE L2 -4 3268 3116 333 335 126 6 chr18 19875528 19875695 -66113239 + MIR SINE MIR 76 262 0 2172 116 13 0 chr18 19875798 19876099 -66112835 - AluSx SINE Alu -7 305 1 2310 91 0 0 chr18 19876196 19876481 -66112453 - AluSg SINE Alu -25 285 1 3458 192 30 2 chr18 19876525 19877154 -66111780 - MER82 DNA MER2_type -6 647 1 186 250 0 0 chr18 19877162 19877218 -66111716 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 641 253 151 22 chr18 19877577 19877802 -66111132 + MIR SINE MIR 9 262 0 29 0 0 0 chr18 19878462 19878491 -66110443 + AT_rich Low_complexity Low_complexity 1 29 0 792 162 0 0 chr18 19878501 19878618 -66110316 - FLAM_C SINE Alu -25 118 2 833 304 75 28 chr18 19878747 19879019 -66109915 - MLT1J LTR MaLR -19 492 234 201 39 0 0 chr18 19879019 19879045 -66109889 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1963 138 4 0 chr18 19879053 19879328 -66109606 - AluSx SINE Alu -36 276 1 833 304 75 28 chr18 19879328 19879474 -66109460 - MLT1J LTR MaLR -283 228 39 2095 125 7 3 chr18 19879474 19879770 -66109164 + AluSg SINE Alu 1 297 -13 833 304 75 28 chr18 19879770 19879811 -66109123 - MLT1J LTR MaLR -472 39 1 2185 122 0 13 chr18 19879919 19880223 -66108711 + AluSx SINE Alu 3 302 -10 2350 100 7 0 chr18 19880633 19880942 -66107992 - AluSx SINE Alu -1 311 1 547 228 9 9 chr18 19881422 19881536 -66107398 - L2 LINE L2 -3 3310 3197 2551 69 0 0 chr18 19881536 19881842 -66107092 - AluY SINE Alu -5 306 1 366 319 88 35 chr18 19882213 19882473 -66106461 + L2 LINE L2 2968 3241 -31 371 229 263 62 chr18 19882744 19882816 -66106118 - MIR SINE MIR -32 230 174 1884 108 50 4 chr18 19882816 19883093 -66105841 - AluSx SINE Alu -22 290 1 371 229 263 62 chr18 19883093 19883199 -66105735 - MIR SINE MIR -88 174 16 329 306 65 0 chr18 19884293 19884401 -66104533 - MIR SINE MIR -100 162 48 183 42 0 0 chr18 19884454 19884478 -66104456 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2007 109 21 25 chr18 19884483 19884768 -66104166 - AluSx SINE Alu -28 284 1 777 137 0 58 chr18 19884768 19884907 -66104027 - FRAM SINE Alu -10 166 36 1148 211 26 0 chr18 19886265 19886492 -66102442 - MIR SINE MIR -2 260 28 26 64 0 0 chr18 19888766 19888813 -66100121 + GC_rich Low_complexity Low_complexity 1 47 0 180 176 0 0 chr18 19889683 19889717 -66099217 + A-rich Low_complexity Low_complexity 2 35 0 198 0 0 0 chr18 19890073 19890095 -66098839 + (CAA)n Simple_repeat Simple_repeat 2 23 0 23 33 0 0 chr18 19892154 19892184 -66096750 + GC_rich Low_complexity Low_complexity 1 30 0 220 135 0 77 chr18 19892455 19892507 -66096427 + (TCCCC)n Simple_repeat Simple_repeat 4 51 0 180 125 0 0 chr18 19894790 19894822 -66094112 + (CGG)n Simple_repeat Simple_repeat 3 34 0 21 36 0 0 chr18 19894918 19894946 -66093988 + GC_rich Low_complexity Low_complexity 1 28 0 27 49 0 0 chr18 19894988 19895029 -66093905 + GC_rich Low_complexity Low_complexity 1 41 0 239 0 0 31 chr18 19895241 19895273 -66093661 + (CCA)n Simple_repeat Simple_repeat 1 31 0 1800 117 70 0 chr18 19896808 19897064 -66091870 - AluSx SINE Alu -37 275 2 23 33 0 0 chr18 19899227 19899257 -66089677 + AT_rich Low_complexity Low_complexity 1 30 0 206 263 38 12 chr18 19900260 19900340 -66088594 + (CCCGG)n Simple_repeat Simple_repeat 1 82 0 2661 44 0 9 chr18 19901079 19901395 -66087539 - AluSp SINE Alu 0 313 1 786 87 0 0 chr18 19903244 19903348 -66085586 - U6 snRNA snRNA -2 105 2 24 32 0 0 chr18 19903799 19903830 -66085104 + AT_rich Low_complexity Low_complexity 1 31 0 611 244 35 0 chr18 19904874 19905046 -66083888 - MER104 DNA Tc2 -2 178 1 2376 103 0 0 chr18 19905481 19905792 -66083142 - AluSq SINE Alu -2 311 1 360 272 44 51 chr18 19907117 19907275 -66081659 - MER5A DNA MER1_type -30 159 3 1982 128 7 20 chr18 19907637 19907933 -66081001 - AluSx SINE Alu -20 292 1 2285 104 3 0 chr18 19910333 19910630 -66078304 + AluSp SINE Alu 1 298 -15 752 114 0 107 chr18 19911089 19911238 -66077696 + FLAM_C SINE Alu 1 133 0 317 254 74 6 chr18 19913738 19913875 -66075059 - MIR SINE MIR -94 168 13 369 0 0 0 chr18 19914170 19914211 -66074723 + (TG)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr18 19914791 19914812 -66074122 + AT_rich Low_complexity Low_complexity 1 21 0 348 111 0 0 chr18 19915006 19915060 -66073874 + (TA)n Simple_repeat Simple_repeat 2 55 0 407 289 60 69 chr18 19915116 19915218 -66073716 - MIR SINE MIR -13 249 148 2193 117 0 7 chr18 19915218 19915525 -66073409 - AluSq SINE Alu -8 305 1 407 289 60 69 chr18 19915525 19915654 -66073280 - MIR SINE MIR -114 148 20 2520 49 0 10 chr18 19916067 19916371 -66072563 - AluSp SINE Alu -12 301 1 783 87 0 0 chr18 19918220 19918324 -66070610 - U6 snRNA snRNA -2 105 2 23 33 0 0 chr18 19918772 19918802 -66070132 + AT_rich Low_complexity Low_complexity 1 30 0 611 244 35 0 chr18 19919845 19920017 -66068917 - MER104 DNA Tc2 -2 178 1 2308 108 0 0 chr18 19920456 19920762 -66068172 - AluSq SINE Alu -7 306 1 360 272 44 51 chr18 19922086 19922244 -66066690 - MER5A DNA MER1_type -30 159 3 304 186 17 0 chr18 19923591 19923650 -66065284 - AluJ/FLAM SINE Alu -242 60 1 723 197 0 15 chr18 19923977 19924109 -66064825 - FLAM_A SINE Alu -3 130 1 1478 152 0 5 chr18 19924199 19924423 -66064511 + AluJb SINE Alu 76 298 -14 222 248 34 114 chr18 19924479 19924548 -66064386 + MIR SINE MIR 31 83 -179 1032 56 63 14 chr18 19924548 19924690 -66064244 - L1PA10 LINE L1 -1 6167 6019 222 248 34 114 chr18 19924690 19924769 -66064165 + MIR SINE MIR 83 167 -95 371 264 9 27 chr18 19924771 19924881 -66064053 - L2 LINE L2 -19 3294 3187 196 263 105 0 chr18 19924879 19924955 -66063979 + MIR SINE MIR 169 252 -10 * 198 250 0 0 chr18 19924923 19924967 -66063967 + L2 LINE L2 3266 3309 -4 723 123 66 8 chr18 19925384 19925506 -66063428 - FLAM_C SINE Alu -4 129 1 36 23 0 0 chr18 19926856 19926899 -66062035 + AT_rich Low_complexity Low_complexity 1 43 0 2396 99 0 0 chr18 19926969 19927273 -66061661 + AluSx SINE Alu 1 304 -8 419 221 10 10 chr18 19927491 19927595 -66061339 + L1MC4a LINE L1 5827 5930 -1878 2124 136 0 3 chr18 19928297 19928599 -66060335 + AluSx SINE Alu 1 301 -11 180 0 0 0 chr18 19929770 19929790 -66059144 + (TG)n Simple_repeat Simple_repeat 2 21 0 290 272 127 0 chr18 19929964 19930112 -66058822 - MIR SINE MIR 0 262 81 2107 112 3 3 chr18 19930686 19930973 -66057961 + AluSx SINE Alu 16 302 -10 544 146 87 10 chr18 19930997 19931100 -66057834 + FRAM SINE Alu 19 129 -47 776 246 203 31 chr18 19931128 19931449 -66057485 + L1MC4 LINE L1 7377 7752 -290 771 130 117 39 chr18 19931453 19931607 -66057327 + FRAM SINE Alu 4 169 -7 572 239 8 0 chr18 19931623 19931757 -66057177 + L1MC4 LINE L1 7775 7909 -133 21 57 0 0 chr18 19931757 19931792 -66057142 + AT_rich Low_complexity Low_complexity 1 35 0 282 185 196 0 chr18 19931831 19931923 -66057011 + L1MC4 LINE L1 7931 8040 -2 1774 166 0 22 chr18 19932089 19932403 -66056531 + AluJb SINE Alu 5 311 -1 316 331 57 6 chr18 19932476 19932651 -66056283 + MIR SINE MIR 2 185 -77 2037 127 17 3 chr18 19936173 19936472 -66052462 + AluSx SINE Alu 1 303 -9 2203 113 7 0 chr18 19936676 19936969 -66051965 + AluSx SINE Alu 1 295 -17 234 267 0 0 chr18 19937863 19937923 -66051011 + L2 LINE L2 3215 3274 -39 382 255 217 0 chr18 19938118 19938275 -66050659 + MIR SINE MIR 15 205 -57 2287 110 7 0 chr18 19938921 19939222 -66049712 - AluSp SINE Alu -10 303 1 571 309 114 55 chr18 19939665 19939860 -66049074 + MLT1L LTR MaLR 113 295 -320 2324 103 3 0 chr18 19939860 19940161 -66048773 + AluSq SINE Alu 1 302 -11 571 309 114 55 chr18 19940161 19940438 -66048496 + MLT1L LTR MaLR 295 613 -2 1877 171 3 0 chr18 19940832 19941141 -66047793 + AluJo SINE Alu 1 310 -2 1272 107 0 0 chr18 19943813 19944113 -66044821 + (TGGA)n Simple_repeat Simple_repeat 1 300 0 1808 144 0 85 chr18 19944244 19944594 -66044340 - AluSx SINE Alu 0 312 1 258 243 100 0 chr18 19944770 19944840 -66044094 + L2 LINE L2 3196 3272 0 495 83 60 0 chr18 19945580 19945664 -66043270 + L1MB3 LINE L1 6094 6182 -1 30 59 0 0 chr18 19945834 19945885 -66043049 + AT_rich Low_complexity Low_complexity 1 51 0 216 211 18 0 chr18 19945938 19945995 -66042939 - MIR SINE MIR -131 131 74 1501 147 16 24 chr18 19946061 19946312 -66042622 - AluJo SINE Alu -20 292 44 312 70 0 0 chr18 19946385 19946428 -66042506 + (TC)n Simple_repeat Simple_repeat 1 43 0 189 259 250 9 chr18 19946897 19947013 -66041921 + MIR SINE MIR 44 187 -75 1884 161 0 3 chr18 19947043 19947329 -66041605 - AluJb SINE Alu -25 287 3 1973 133 3 24 chr18 19947371 19947664 -66041270 + AluJb SINE Alu 14 300 -12 2357 93 10 3 chr18 19948071 19948382 -66040552 + AluSp SINE Alu 1 313 0 865 164 15 0 chr18 19948399 19948533 -66040401 + AluJo SINE Alu 1 136 -176 251 224 168 19 chr18 19949461 19949568 -66039366 + L1ME LINE L1 5649 5771 -350 1526 153 0 69 chr18 19949605 19949925 -66039009 - L1MA9 LINE L1 -365 5947 5650 724 161 0 0 chr18 19949921 19950045 -66038889 + L1MA9 LINE L1 6013 6136 -176 * 1034 150 25 0 chr18 19950046 19950206 -66038728 + AluJo SINE Alu 134 297 -15 1234 215 58 31 chr18 19951050 19951343 -66037591 + AluJo SINE Alu 2 302 0 210 242 15 45 chr18 19951618 19951684 -66037250 + MIR SINE MIR 81 144 -64 261 0 0 0 chr18 19951819 19951848 -66037086 + (CA)n Simple_repeat Simple_repeat 2 30 0 937 162 157 43 chr18 19952434 19952644 -66036290 - L1MC1 LINE L1 -2 6331 6098 354 258 200 7 chr18 19952854 19953009 -66035925 - MER5A DNA MER1_type -1 188 4 2196 116 0 0 chr18 19953212 19953520 -66035414 - AluSx SINE Alu 0 308 1 232 139 0 0 chr18 19953520 19953538 -66035396 + (TTA)n Simple_repeat Simple_repeat 3 180 0 1610 174 4 8 chr18 19953574 19953838 -66035096 - AluJb SINE Alu -49 263 1 25 0 0 0 chr18 19954005 19954030 -66034904 + AT_rich Low_complexity Low_complexity 1 25 0 375 255 49 10 chr18 19954217 19954319 -66034615 - MIR3 SINE MIR -18 190 85 244 347 0 0 chr18 19954779 19954854 -66034080 - Charlie4 DNA MER1_type -5 1956 1882 5009 118 3 0 chr18 19954873 19955590 -66033344 + L1PA14 LINE L1 5440 6158 -3 1015 147 5 90 chr18 19955759 19955970 -66032964 + AluJo SINE Alu 90 282 -30 1779 155 6 40 chr18 19956617 19956940 -66031994 + AluJb SINE Alu 1 312 0 1385 161 0 0 chr18 19957685 19957890 -66031044 - AluJo SINE Alu -22 290 86 22 0 0 0 chr18 19957956 19957978 -66030956 + AT_rich Low_complexity Low_complexity 1 22 0 2155 73 0 7 chr18 19958057 19958329 -66030605 + AluSc SINE Alu 1 270 -39 586 100 0 0 chr18 19958634 19958714 -66030220 + MADE1 DNA Mariner 1 80 0 826 267 48 38 chr18 19958886 19959257 -66029677 - L1ME4a LINE L1 -225 5896 5522 2057 154 0 3 chr18 19959637 19959948 -66028986 + AluJb SINE Alu 3 312 0 419 190 14 113 chr18 19960206 19960260 -66028674 - MIR SINE MIR -26 236 178 1729 124 109 4 chr18 19960260 19960527 -66028407 - AluSq SINE Alu -18 295 1 419 190 14 113 chr18 19960527 19960614 -66028320 - MIR SINE MIR -84 178 109 233 282 48 29 chr18 19960771 19960874 -66028060 - MIR SINE MIR 0 262 158 1854 153 47 7 chr18 19961246 19961546 -66027388 - AluJo SINE Alu 0 312 1 2463 93 7 0 chr18 19962796 19963106 -66025828 + AluSx SINE Alu 1 312 0 225 0 0 0 chr18 19963352 19963377 -66025557 + (TG)n Simple_repeat Simple_repeat 1 25 0 180 0 0 0 chr18 19965851 19965871 -66023063 + (TG)n Simple_repeat Simple_repeat 2 21 0 516 298 125 0 chr18 19965922 19966130 -66022804 + MIR SINE MIR 8 241 -21 303 28 0 0 chr18 19967246 19967282 -66021652 + (TC)n Simple_repeat Simple_repeat 1 36 0 827 200 0 7 chr18 19967383 19967575 -66021359 - FRAM SINE Alu 0 188 1 21 0 0 0 chr18 19968255 19968276 -66020658 + AT_rich Low_complexity Low_complexity 1 21 0 181 319 59 50 chr18 19968391 19968510 -66020424 + MIR3 SINE MIR 85 204 -4 824 254 79 0 chr18 19969070 19969310 -66019624 - MIR SINE MIR -3 259 1 2245 100 0 0 chr18 19969345 19969654 -66019280 + AluSx SINE Alu 5 313 0 247 293 30 10 chr18 19970227 19970326 -66018608 - MER5A DNA MER1_type 0 189 89 342 163 12 23 chr18 19970475 19970561 -66018373 + CT-rich Low_complexity Low_complexity 3 87 0 1959 148 3 0 chr18 19970600 19970891 -66018043 - AluSx SINE Alu -20 292 1 1305 272 69 44 chr18 19970953 19971895 -66017039 - L1MC4a LINE L1 -744 5402 4881 22 0 0 0 chr18 19971965 19971987 -66016947 + AT_rich Low_complexity Low_complexity 1 22 0 562 265 46 62 chr18 19971987 19972079 -66016855 - L1MC4a LINE L1 -1300 4846 4754 2152 146 9 9 chr18 19972079 19972422 -66016512 - MER7A DNA MER2_type -4 342 2 562 265 46 62 chr18 19972422 19972809 -66016125 - L1MC4a LINE L1 -1392 4754 4375 182 192 308 26 chr18 19973013 19973091 -66015843 - MIR3 SINE MIR -1 207 108 2061 116 36 3 chr18 19973904 19974205 -66014729 - AluSx SINE Alu -1 311 1 194 318 0 11 chr18 19974528 19974616 -66014318 + L2 LINE L2 1947 2033 -1281 245 321 62 0 chr18 19974673 19974785 -66014149 + MIR SINE MIR 50 168 -94 363 83 0 0 chr18 19974964 19975012 -66013922 - MLT2B1 LTR ERVL -7 513 466 276 30 0 0 chr18 19975051 19975084 -66013850 + (TA)n Simple_repeat Simple_repeat 2 34 0 336 77 0 0 chr18 19975084 19975136 -66013798 + (GA)n Simple_repeat Simple_repeat 1 52 0 1126 163 44 9 chr18 19975136 19975347 -66013587 - MLT2C2 LTR ERVL -19 535 221 1345 113 67 0 chr18 19975348 19975542 -66013392 - AluSg/x SINE Alu -21 289 83 940 164 48 6 chr18 19975546 19975711 -66013223 - MLT2D LTR ERVL -186 228 57 1207 204 39 18 chr18 19975711 19975873 -66013061 - AluJo SINE Alu -16 296 124 2139 131 0 13 chr18 19975873 19976178 -66012756 - AluSx SINE Alu -11 301 1 1207 204 39 18 chr18 19976178 19976300 -66012634 - AluJo SINE Alu -188 124 6 443 154 0 0 chr18 19976306 19976371 -66012563 - MLT2D LTR ERVL -398 66 2 369 311 15 0 chr18 19976604 19976739 -66012195 + MIR3 SINE MIR 49 185 -23 2142 122 3 6 chr18 19976876 19977187 -66011747 + AluSx SINE Alu 2 311 -1 24 53 0 0 chr18 19977289 19977327 -66011607 + AT_rich Low_complexity Low_complexity 1 38 0 422 299 43 12 chr18 19977411 19977575 -66011359 + MIR SINE MIR 8 176 -86 422 193 11 0 chr18 19978288 19978376 -66010558 + L1MA9 LINE L1 6202 6290 -22 23 0 0 0 chr18 19978376 19978399 -66010535 + AT_rich Low_complexity Low_complexity 1 23 0 2220 118 0 3 chr18 19978402 19978715 -66010219 + AluSx SINE Alu 1 312 0 627 182 64 0 chr18 19978763 19978873 -66010061 + FLAM_C SINE Alu 1 117 -26 307 98 0 0 chr18 19979227 19979268 -66009666 - MER4D LTR ERV1 -72 800 760 1764 199 0 0 chr18 19979271 19979577 -66009357 - AluJb SINE Alu -6 306 1 1838 69 192 8 chr18 19979939 19980200 -66008734 + AluSg1 SINE Alu 1 309 0 318 61 20 0 chr18 19980634 19980683 -66008251 - Alu SINE Alu -2 300 251 978 122 19 0 chr18 19980783 19980939 -66007995 - L1MB3 LINE L1 -231 5952 5794 592 286 32 40 chr18 19982290 19982538 -66006396 + LTR33 LTR ERVL 197 442 -79 184 378 13 26 chr18 19982618 19982769 -66006165 + L2 LINE L2 2843 2991 -281 328 297 95 1 chr18 19983601 19983749 -66005185 + MIR SINE MIR 71 230 -32 300 330 112 0 chr18 19983977 19984165 -66004769 - MIR SINE MIR -25 237 29 1847 127 90 0 chr18 19985022 19985290 -66003644 - AluSx SINE Alu -20 292 1 407 256 22 36 chr18 19985334 19985471 -66003463 - MIR SINE MIR -108 154 20 219 113 57 0 chr18 19985487 19985540 -66003394 + (TA)n Simple_repeat Simple_repeat 2 57 0 225 159 0 0 chr18 19985694 19985738 -66003196 + A-rich Low_complexity Low_complexity 1 44 0 235 135 81 108 chr18 19986175 19986286 -66002648 - MIR SINE MIR -71 137 53 2177 117 0 0 chr18 19986948 19987259 -66001675 - AluSx SINE Alu 0 311 1 526 169 0 0 chr18 19987799 19987882 -66001052 + AluJ/FLAM SINE Alu 3 85 -227 1321 225 31 0 chr18 19987931 19988220 -66000714 + MLT1E2 LTR MaLR 137 434 -192 865 121 8 15 chr18 19988222 19988354 -66000580 + FLAM_C SINE Alu 2 132 -1 528 255 24 4 chr18 19988354 19988598 -66000336 + GA-rich Low_complexity Low_complexity 1 248 0 1203 138 154 28 chr18 19988699 19988952 -65999982 + AluJb SINE Alu 28 312 0 230 146 0 36 chr18 19989692 19989747 -65999187 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 2056 88 7 3 chr18 19990515 19990800 -65998134 - L1P5 LINE L1 -584 5567 5282 607 152 0 9 chr18 19990800 19990901 -65998033 + L1PB1 LINE L1 6048 6151 0 2401 88 3 0 chr18 19990955 19991252 -65997682 - AluSp SINE Alu -13 300 3 435 253 208 10 chr18 19991466 19991668 -65997266 + MIR SINE MIR 11 252 -10 273 231 254 45 chr18 19991880 19992014 -65996920 - L2 LINE L2 0 3272 3111 233 279 17 64 chr18 19992300 19992472 -65996462 - L2 LINE L2 -787 2527 2364 651 176 118 0 chr18 19993735 19993854 -65995080 - FLAM_C SINE Alu 0 133 1 2099 109 10 16 chr18 19994221 19994532 -65994402 + AluSq SINE Alu 1 309 -4 609 257 160 0 chr18 19994591 19994778 -65994156 - MIR SINE MIR -16 246 30 2073 256 105 31 chr18 19994783 19995772 -65993162 - L1M4 LINE L1 -1030 5185 4124 2677 151 25 17 chr18 19995834 19995964 -65992970 - L1MB4 LINE L1 -1 6179 6052 2365 114 0 0 chr18 19995964 19996270 -65992664 - AluSx SINE Alu -6 306 1 2677 151 25 17 chr18 19996270 19996655 -65992279 - L1MB4 LINE L1 -128 6052 5660 910 194 6 0 chr18 19996655 19996815 -65992119 - MSTD LTR MaLR -18 378 218 1173 296 72 61 chr18 19996869 19998459 -65990475 - L1MEc LINE L1 -3339 2876 1314 1393 140 18 13 chr18 19998459 19998688 -65990246 - MER30 DNA MER1_type 0 230 1 1173 296 72 61 chr18 19998688 19998764 -65990170 - L1MEc LINE L1 -4901 1314 1240 208 314 0 47 chr18 19998905 19998991 -65989943 - L3 LINE CR1 -219 1358 1277 344 71 0 0 chr18 19999004 19999046 -65989888 - 5S rRNA rRNA -79 42 1 1758 166 82 3 chr18 19999174 19999493 -65989441 + MER2 DNA MER2_type 1 344 0 358 252 122 8 chr18 19999497 19999620 -65989314 - MIR SINE MIR -120 142 6 278 317 29 19 chr18 19999640 19999744 -65989190 - L3 LINE CR1 -623 954 850 295 264 142 14 chr18 19999817 19999965 -65988969 - L3 LINE CR1 -726 851 685 538 310 61 67 chr18 20000154 20000483 -65988451 - L3 LINE CR1 -1214 363 37 459 264 102 20 chr18 20000493 20000690 -65988244 + MIR SINE MIR 3 215 -47 367 259 80 0 chr18 20000906 20001018 -65987916 + MIR3 SINE MIR 76 196 -12 24 0 0 0 chr18 20001558 20001582 -65987352 + AT_rich Low_complexity Low_complexity 1 24 0 330 26 0 0 chr18 20001777 20001816 -65987118 + (TAAAA)n Simple_repeat Simple_repeat 5 43 0 2279 105 0 19 chr18 20001957 20002271 -65986663 - AluSg SINE Alu -2 308 1 198 0 0 0 chr18 20002898 20002920 -65986014 + (TG)n Simple_repeat Simple_repeat 2 23 0 244 353 72 13 chr18 20003264 20003417 -65985517 - L2 LINE L2 -14 3258 3097 251 203 14 0 chr18 20004051 20004120 -65984814 + CT-rich Low_complexity Low_complexity 3 72 0 770 259 52 60 chr18 20004145 20004512 -65984422 - L1MD2 LINE L1 -14 6345 5982 367 325 46 10 chr18 20005410 20005604 -65983330 - L3 LINE CR1 -258 1319 1119 25 0 0 0 chr18 20005844 20005869 -65983065 + AT_rich Low_complexity Low_complexity 1 25 0 508 200 10 0 chr18 20006229 20006329 -65982605 + U13 snRNA snRNA 4 104 0 2145 108 3 7 chr18 20006422 20006719 -65982215 - AluSc SINE Alu -13 296 1 4633 138 41 11 chr18 20006724 20007505 -65981429 - L1PA16 LINE L1 -3 6163 5360 1864 121 38 60 chr18 20007563 20007877 -65981057 + AluSx SINE Alu 1 307 -5 736 223 39 163 chr18 20007952 20008516 -65980418 - L1MC4 LINE L1 -2 8040 7547 304 295 78 18 chr18 20008522 20008688 -65980246 - L1MEd LINE L1 -5092 1027 852 2001 106 0 60 chr18 20009293 20009424 -65979510 - AluSx SINE Alu 0 308 171 2203 119 0 7 chr18 20009424 20009727 -65979207 - AluSx SINE Alu -11 301 1 2001 106 0 60 chr18 20009727 20009920 -65979014 - AluSx SINE Alu -137 171 2 230 323 79 39 chr18 20010155 20010409 -65978525 + L2 LINE L2 2714 2977 -337 519 327 124 14 chr18 20010718 20011182 -65977752 + L2 LINE L2 2799 3313 0 216 0 0 0 chr18 20011860 20011884 -65977050 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 2292 112 0 0 chr18 20012237 20012533 -65976401 + AluSx SINE Alu 1 296 -16 364 308 80 27 chr18 20012706 20012930 -65976004 - MIR SINE MIR -26 236 1 662 301 5 0 chr18 20013537 20013723 -65975211 + MIR SINE MIR 54 240 -22 285 98 0 0 chr18 20013741 20013782 -65975152 + (CAGA)n Simple_repeat Simple_repeat 4 44 0 308 261 0 34 chr18 20013795 20013883 -65975051 - MIR SINE MIR -126 136 52 191 111 0 28 chr18 20013968 20014004 -65974930 + (ATG)n Simple_repeat Simple_repeat 2 36 0 1559 224 37 81 chr18 20014121 20014604 -65974330 + MLT1C LTR MaLR 6 467 0 505 182 41 41 chr18 20014607 20014728 -65974206 - MIR SINE MIR -65 143 23 782 179 33 20 chr18 20014786 20014937 -65973997 - LTR32 LTR ERVL 0 471 319 1797 185 28 0 chr18 20014946 20015270 -65973664 - LTR32 LTR ERVL -119 352 20 1004 267 95 14 chr18 20015855 20016286 -65972648 + L2 LINE L2 2829 3294 -19 896 168 7 7 chr18 20016800 20016955 -65971979 - LTR32 LTR ERVL 0 471 317 1502 187 93 0 chr18 20017010 20017320 -65971614 - LTR32 LTR ERVL -119 352 14 1884 241 67 26 chr18 20020357 20020922 -65968012 + MLT1E LTR MaLR 3 590 -3 1771 179 3 13 chr18 20021431 20021744 -65967190 - AluJo SINE Alu 0 312 3 200 157 20 20 chr18 20021883 20021934 -65967000 + (TGAA)n Simple_repeat Simple_repeat 2 52 0 3266 166 52 17 chr18 20022502 20023141 -65965793 + L1MA8 LINE L1 5631 6291 0 612 61 31 0 chr18 20024275 20024373 -65964561 + (TCTA)n Simple_repeat Simple_repeat 1 101 0 252 0 0 0 chr18 20024769 20024797 -65964137 + (CA)n Simple_repeat Simple_repeat 2 29 0 324 313 3 67 chr18 20026227 20026362 -65962572 + MIR SINE MIR 21 152 -56 275 289 39 23 chr18 20027969 20028097 -65960837 - LTR16C LTR ERVL -10 481 352 2053 103 50 13 chr18 20028542 20028843 -65960091 + AluSx SINE Alu 1 312 0 188 266 16 0 chr18 20029151 20029215 -65959719 + L2 LINE L2 2790 2854 -460 442 320 45 67 chr18 20029231 20029587 -65959347 - L2 LINE L2 -8 3264 2917 618 173 39 0 chr18 20030206 20030333 -65958601 - FLAM_C SINE Alu 0 133 2 22 35 0 0 chr18 20030584 20030613 -65958321 + AT_rich Low_complexity Low_complexity 1 29 0 281 334 79 9 chr18 20030875 20031040 -65957894 + MIR SINE MIR 17 190 -72 209 95 0 24 chr18 20031759 20031801 -65957133 + (TTTTTG)n Simple_repeat Simple_repeat 3 43 0 698 230 73 36 chr18 20031805 20032053 -65956881 + MER46C DNA MER2_type 80 336 -2 411 295 69 0 chr18 20032085 20032258 -65956676 - MIR SINE MIR -60 202 18 784 207 101 0 chr18 20032340 20032528 -65956406 + MIR SINE MIR 1 207 -55 575 257 84 19 chr18 20033649 20033863 -65955071 + MIR SINE MIR 35 262 0 256 293 75 0 chr18 20033877 20033983 -65954951 + MIR SINE MIR 77 190 -72 322 250 64 4 chr18 20034258 20034398 -65954536 - MIR SINE MIR -33 229 21 276 270 61 0 chr18 20035822 20035937 -65952997 - MIR3 SINE MIR -6 202 81 26 30 0 0 chr18 20036355 20036388 -65952546 + GC_rich Low_complexity Low_complexity 1 33 0 636 276 22 5 chr18 20038247 20038432 -65950502 - MIR SINE MIR -8 254 67 283 345 56 7 chr18 20038605 20038747 -65950187 - MIR SINE MIR -98 164 16 396 59 0 0 chr18 20038792 20038843 -65950091 + (TG)n Simple_repeat Simple_repeat 2 52 0 182 296 0 0 chr18 20038998 20039042 -65949892 + L2 LINE L2 3216 3259 -13 2214 65 11 0 chr18 20039065 20039426 -65949508 - AluY SINE Alu 0 364 1 196 279 44 44 chr18 20039690 20039758 -65949176 + L2 LINE L2 3188 3255 -17 1085 63 0 0 chr18 20039944 20040086 -65948848 - L1MA6 LINE L1 0 6300 6159 5637 133 12 11 chr18 20040187 20041801 -65947133 - L1MA6 LINE L1 -133 6167 4549 4437 120 37 7 chr18 20041814 20042521 -65946413 - L1PB4 LINE L1 -3 6153 5426 713 282 68 0 chr18 20042565 20042771 -65946163 - MIR SINE MIR -30 232 13 371 262 27 59 chr18 20044073 20044253 -65944681 - MIR SINE MIR -64 144 22 474 146 0 0 chr18 20044742 20044824 -65944110 + (TTCC)n Simple_repeat Simple_repeat 3 84 0 437 260 99 69 chr18 20044828 20045220 -65943714 - MLT1J2 LTR MaLR -32 418 15 32 26 0 0 chr18 20045510 20045549 -65943385 + AT_rich Low_complexity Low_complexity 1 39 0 2118 97 38 0 chr18 20045608 20045896 -65943038 - AluSp SINE Alu -14 299 1 30 0 0 0 chr18 20046129 20046159 -65942775 + AT_rich Low_complexity Low_complexity 1 30 0 280 323 108 39 chr18 20046231 20046618 -65942316 + L1MC4a LINE L1 5533 5946 -1862 180 0 0 0 chr18 20046619 20046639 -65942295 + (CAAAAA)n Simple_repeat Simple_repeat 4 23 0 1435 146 36 99 chr18 20046847 20047180 -65941754 + AluJb SINE Alu 1 314 0 507 287 117 5 chr18 20047347 20047570 -65941364 - MIR SINE MIR -1 261 14 181 208 28 0 chr18 20047760 20047832 -65941102 + (TA)n Simple_repeat Simple_repeat 1 74 0 817 75 0 0 chr18 20048637 20048743 -65940191 + AluSg/x SINE Alu 198 303 -6 333 207 110 0 chr18 20049066 20049148 -65939786 + MER117 DNA MER1_type 1 91 -106 232 316 182 0 chr18 20049296 20049521 -65939413 + L1MEd LINE L1 90 355 -5764 850 279 53 61 chr18 20049573 20050230 -65938704 + L1MEd LINE L1 587 1238 -4881 2717 290 63 26 chr18 20050230 20051889 -65937045 + L2 LINE L2 1597 3313 0 514 130 0 0 chr18 20051908 20051977 -65936957 + Tigger2 DNA MER2_type 1 69 -2649 * 2442 100 74 5 chr18 20051961 20052340 -65936594 + Tigger2 DNA MER2_type 2267 2671 -47 5365 135 45 60 chr18 20052575 20052898 -65936036 - L1MA4 LINE L1 -6 6294 5968 1632 178 26 33 chr18 20052898 20053201 -65935733 - AluJo SINE Alu -11 301 1 5365 135 45 60 chr18 20053201 20053958 -65934976 - L1MA4 LINE L1 -332 5968 5223 234 326 91 16 chr18 20053965 20054152 -65934782 + HAL1 LINE L1 1433 1633 -874 244 305 11 0 chr18 20055249 20055344 -65933590 + L1MEd LINE L1 2152 2247 -3882 290 289 141 23 chr18 20055454 20055582 -65933352 + L2 LINE L2 3171 3313 0 473 241 28 0 chr18 20056843 20056951 -65931983 + MER81 DNA DNA 4 114 0 676 207 0 0 chr18 20057068 20057184 -65931750 + FLAM_C SINE Alu 1 116 -17 231 280 20 90 chr18 20057228 20057328 -65931606 + L2 LINE L2 2976 3068 -204 538 255 121 45 chr18 20057351 20057665 -65931269 + MER46C DNA MER2_type 1 338 0 368 307 124 41 chr18 20057851 20058245 -65930689 - MLT1L LTR MaLR -150 465 39 330 323 226 21 chr18 20058288 20058669 -65930265 - L3 LINE CR1 -296 1281 823 1513 222 78 8 chr18 20059396 20059766 -65929168 + MSTD LTR MaLR 1 396 0 307 287 28 21 chr18 20060404 20060547 -65928387 + L1ME1 LINE L1 97 240 -6302 245 313 10 10 chr18 20060908 20061004 -65927930 + L1ME1 LINE L1 780 875 -5667 1991 135 0 0 chr18 20061270 20061552 -65927382 + AluJb SINE Alu 1 282 -30 1054 186 79 31 chr18 20061569 20061924 -65927010 + L1ME1 LINE L1 1046 1417 -5125 474 195 17 8 chr18 20061925 20062043 -65926891 + L1ME1 LINE L1 2695 2813 -3831 6112 234 74 11 chr18 20062048 20064772 -65924162 + L1ME1 LINE L1 3559 6457 -207 782 192 0 0 chr18 20064903 20065033 -65923901 - FLAM_A SINE Alu -2 131 2 28 29 0 0 chr18 20065039 20065074 -65923860 + AT_rich Low_complexity Low_complexity 1 35 0 385 229 111 28 chr18 20065861 20066005 -65922929 + MLT1D LTR MaLR 1 156 -349 273 287 37 43 chr18 20066165 20066329 -65922605 - L1MC5 LINE L1 -76 7885 7723 574 216 90 36 chr18 20067355 20067522 -65921412 + MER20 DNA MER1_type 5 180 -39 475 300 100 32 chr18 20067961 20068271 -65920663 + MLT1I LTR MaLR 16 346 -63 21 0 0 0 chr18 20068271 20068292 -65920642 + AT_rich Low_complexity Low_complexity 1 21 0 470 147 27 0 chr18 20068293 20068368 -65920566 - AluJb SINE Alu -24 288 212 1455 191 8 12 chr18 20068368 20068625 -65920309 - AluJo SINE Alu -56 256 1 306 237 40 0 chr18 20068627 20068703 -65920231 + MLT1I LTR MaLR 331 409 0 991 237 108 44 chr18 20068781 20069236 -65919698 + MLT1L LTR MaLR 132 615 0 2106 120 6 41 chr18 20069521 20069837 -65919097 + AluSx SINE Alu 1 305 -7 25 31 0 0 chr18 20070008 20070040 -65918894 + AT_rich Low_complexity Low_complexity 1 32 0 294 328 16 68 chr18 20070350 20070542 -65918392 + MIR SINE MIR 2 183 -79 2215 103 3 7 chr18 20070575 20070875 -65918059 + AluSq SINE Alu 1 299 -14 2235 102 3 40 chr18 20070980 20071304 -65917630 + AluSx SINE Alu 1 312 0 1443 18 6 0 chr18 20071816 20071987 -65916947 - L1PA2 LINE L1 0 6155 5984 22 0 0 0 chr18 20072242 20072264 -65916670 + AT_rich Low_complexity Low_complexity 1 22 0 2072 116 10 10 chr18 20072266 20072560 -65916374 + AluSx SINE Alu 1 294 -18 192 77 0 0 chr18 20072627 20072653 -65916281 + (T)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr18 20072662 20072683 -65916251 + AT_rich Low_complexity Low_complexity 1 21 0 1133 282 111 7 chr18 20073712 20074116 -65914818 - MLT1J LTR MaLR -51 460 15 1490 148 5 0 chr18 20074258 20074475 -65914459 - AluSx SINE Alu -94 218 1 249 311 180 24 chr18 20075547 20075714 -65913220 + L2 LINE L2 2569 2761 -553 564 281 109 51 chr18 20077054 20077467 -65911467 + MLT1J2 LTR MaLR 1 437 -13 208 68 23 45 chr18 20077608 20077652 -65911282 + (TAA)n Simple_repeat Simple_repeat 2 44 0 2319 118 6 19 chr18 20077736 20078099 -65910835 - THE1B LTR MaLR -6 358 1 368 139 0 56 chr18 20078099 20078171 -65910763 + AluJ/FRAM SINE Alu 219 286 -16 186 43 0 0 chr18 20078171 20078194 -65910740 + (CTA)n Simple_repeat Simple_repeat 1 23 0 638 301 133 11 chr18 20078279 20078902 -65910032 - L2 LINE L2 -135 3178 2468 1105 282 114 15 chr18 20078906 20079370 -65909564 - L2 LINE L2 0 3313 2804 1043 169 0 21 chr18 20079394 20079583 -65909351 - AluSc SINE Alu -13 296 112 187 254 109 0 chr18 20079583 20079638 -65909296 - L2 LINE L2 -662 2652 2592 1558 301 75 12 chr18 20079721 20080376 -65908558 - L2 LINE L2 -899 2415 1720 309 26 0 0 chr18 20080589 20080627 -65908307 + (TG)n Simple_repeat Simple_repeat 2 39 0 271 225 14 0 chr18 20081527 20081598 -65907336 + (CTA)n Simple_repeat Simple_repeat 1 72 0 407 289 84 0 chr18 20081598 20081882 -65907052 + MER113 DNA MER1_type? 96 403 -118 300 165 72 72 chr18 20081883 20081980 -65906954 + L1MB5 LINE L1 6078 6174 0 280 250 121 14 chr18 20082275 20082415 -65906519 + MIR SINE MIR 70 224 -38 192 77 0 0 chr18 20082616 20082642 -65906292 + (GAA)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr18 20083211 20083239 -65905695 + AT_rich Low_complexity Low_complexity 1 28 0 4546 87 11 6 chr18 20083725 20084371 -65904563 + L1PB2 LINE L1 5503 6151 0 210 37 0 0 chr18 20085410 20085437 -65903497 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1595 173 62 0 chr18 20086353 20086625 -65902309 + AluJb SINE Alu 21 309 -3 1457 192 56 12 chr18 20086927 20087265 -65901669 + L1MB8 LINE L1 5826 6178 0 2050 129 16 13 chr18 20087275 20087585 -65901349 + AluSx SINE Alu 1 311 -1 507 134 0 0 chr18 20087585 20087667 -65901267 + (GA)n Simple_repeat Simple_repeat 1 82 0 229 174 0 22 chr18 20087763 20087809 -65901125 + MER21B LTR ERV1 21 65 -798 * 693 223 47 0 chr18 20087806 20087954 -65900980 + MER21B LTR ERV1 660 814 -49 508 321 80 39 chr18 20088290 20088726 -65900208 - L1M4 LINE L1 -1049 5097 4644 195 42 0 0 chr18 20088975 20088999 -65899935 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1587 200 0 7 chr18 20089001 20089271 -65899663 - AluJo SINE Alu -30 282 15 235 0 0 54 chr18 20089283 20089320 -65899614 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 2364 57 0 3 chr18 20089322 20089605 -65899329 - AluY SINE Alu -29 282 1 345 300 100 17 chr18 20089636 20089756 -65899178 + L2 LINE L2 3184 3313 0 184 257 0 0 chr18 20090203 20090238 -65898696 + MIR SINE MIR 222 256 -6 6562 83 3 4 chr18 20091844 20092832 -65896102 + L1PA10 LINE L1 5171 6157 -11 293 226 0 0 chr18 20092958 20093011 -65895923 - MIR SINE MIR -67 141 89 339 287 144 20 chr18 20093378 20093573 -65895361 - L1ME1 LINE L1 -241 5925 5707 1401 172 0 5 chr18 20094687 20094902 -65894032 + AluJb SINE Alu 79 292 -20 848 254 44 0 chr18 20095113 20095318 -65893616 + MIR SINE MIR 49 262 0 521 215 162 21 chr18 20095403 20095594 -65893340 - LTR16C LTR ERVL -3 488 271 1954 156 13 0 chr18 20095674 20095976 -65892958 - AluSx SINE Alu -6 306 1 953 136 6 45 chr18 20096901 20097078 -65891856 + MER44D DNA MER2_type 2 441 -168 48 102 0 0 chr18 20097124 20097291 -65891643 + AT_rich Low_complexity Low_complexity 1 167 0 290 102 0 0 chr18 20097292 20097341 -65891593 + MER44D DNA MER2_type 469 517 -88 1020 81 0 0 chr18 20097385 20097521 -65891413 + MER44D DNA MER2_type 469 604 -1 326 283 0 11 chr18 20097550 20097642 -65891292 + L1MC4 LINE L1 6613 6703 -1339 202 216 0 0 chr18 20097642 20097679 -65891255 + (CATATA)n Simple_repeat Simple_repeat 4 40 0 201 132 0 0 chr18 20097973 20098011 -65890923 + (TC)n Simple_repeat Simple_repeat 1 38 0 444 323 157 0 chr18 20098748 20098971 -65889963 - MIR SINE MIR -2 260 3 2133 102 0 24 chr18 20098992 20099286 -65889648 + AluSg SINE Alu 5 291 -19 1634 182 106 3 chr18 20099544 20099873 -65889061 - MLT1A1 LTR MaLR 0 365 3 1969 106 42 39 chr18 20100226 20100538 -65888396 + AluSq SINE Alu 1 313 0 238 275 119 46 chr18 20100624 20100733 -65888201 - MIR SINE MIR -99 163 47 855 264 93 8 chr18 20101494 20101740 -65887194 - L2 LINE L2 0 3313 3047 299 339 94 11 chr18 20102169 20102349 -65886585 - MIR SINE MIR -14 248 54 524 211 70 31 chr18 20102375 20102503 -65886431 - MIR3 SINE MIR -27 181 49 691 272 86 17 chr18 20102622 20102916 -65886018 + L1ME3A LINE L1 4948 5296 -866 225 0 0 0 chr18 20102916 20102941 -65885993 + (TG)n Simple_repeat Simple_repeat 2 26 0 691 272 86 17 chr18 20102941 20103138 -65885796 + L1ME3A LINE L1 5296 5478 -684 261 184 0 0 chr18 20103146 20103195 -65885739 - MER116 DNA Mariner -5 75 27 279 241 74 19 chr18 20103208 20103316 -65885618 + L1ME3A LINE L1 5487 5600 -570 2228 123 7 0 chr18 20103341 20103643 -65885291 + AluSx SINE Alu 1 304 -8 329 215 155 32 chr18 20103750 20103969 -65884965 - MLT1H LTR MaLR -196 353 108 691 252 58 14 chr18 20104001 20104272 -65884662 + L1ME3A LINE L1 5571 5829 -341 180 0 0 0 chr18 20104272 20104292 -65884642 + (GA)n Simple_repeat Simple_repeat 1 20 0 691 252 58 14 chr18 20104292 20104530 -65884404 + L1ME3A LINE L1 5829 6161 -9 536 340 5 21 chr18 20104801 20104989 -65883945 - MER5A DNA MER1_type -3 186 2 423 262 16 24 chr18 20105156 20105282 -65883652 - L2 LINE L2 -4 3309 3185 4174 170 28 7 chr18 20106134 20106852 -65882082 - L1MB1 LINE L1 -1 6167 5435 22 35 0 0 chr18 20106922 20106951 -65881983 + AT_rich Low_complexity Low_complexity 1 29 0 451 325 0 38 chr18 20106987 20107147 -65881787 + MIR SINE MIR 29 182 -80 287 280 50 10 chr18 20107154 20107254 -65881680 + L1MC5 LINE L1 7009 7112 -849 414 0 0 0 chr18 20107254 20107300 -65881634 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 234 270 43 35 chr18 20107307 20107422 -65881512 + L1MC4 LINE L1 7139 7254 -788 937 234 68 96 chr18 20107573 20108164 -65880770 + L1MC5 LINE L1 7338 7911 -50 3876 98 0 0 chr18 20108476 20108999 -65879935 + L1P3 LINE L1 668 1190 -5271 2467 59 30 0 chr18 20108999 20109477 -65879457 + L1PA7 LINE L1 5834 6320 0 372 228 219 18 chr18 20109541 20109655 -65879279 - MER5A DNA MER1_type -6 183 47 197 281 78 86 chr18 20109643 20109771 -65879163 - L2 LINE L2 -98 3174 3048 * 2857 101 0 8 chr18 20110845 20111212 -65877722 + THE1B LTR MaLR 1 364 0 314 298 102 26 chr18 20111601 20111866 -65877068 + L2 LINE L2 1895 2179 -1135 294 77 0 77 chr18 20112315 20112367 -65876567 + MADE1 DNA Mariner 29 76 -4 1943 145 7 16 chr18 20113116 20113419 -65875515 - AluSx SINE Alu -9 303 4 332 303 114 101 chr18 20115363 20115660 -65873274 - L2 LINE L2 0 3272 2972 278 194 15 0 chr18 20115843 20115910 -65873024 + GA-rich Low_complexity Low_complexity 1 68 0 37 23 0 0 chr18 20117500 20117544 -65871390 + AT_rich Low_complexity Low_complexity 1 44 0 463 180 210 41 chr18 20120613 20120779 -65868155 + MLT1H LTR MaLR 396 592 -1 401 235 32 54 chr18 20121860 20121939 -65866995 + L1P5 LINE L1 5199 5278 -873 2088 146 0 0 chr18 20121939 20122240 -65866694 + AluSx SINE Alu 1 301 -11 401 235 32 54 chr18 20122240 20122428 -65866506 + L1P5 LINE L1 5278 5466 -685 * 2256 204 70 46 chr18 20122409 20122870 -65866064 + L1MDa LINE L1 21 500 -6040 2494 105 68 0 chr18 20122870 20123221 -65865713 + THE1C LTR MaLR 1 375 0 2256 204 70 46 chr18 20123221 20123347 -65865587 + L1MDa LINE L1 500 622 -5918 4183 210 83 25 chr18 20123359 20124393 -65864541 + L1MD2 LINE L1 5254 6347 -12 663 292 81 19 chr18 20124500 20124808 -65864126 + L1ME3A LINE L1 5580 5906 -264 21 36 0 0 chr18 20125017 20125045 -65863889 + AT_rich Low_complexity Low_complexity 1 28 0 222 37 0 0 chr18 20125129 20125156 -65863778 + (TG)n Simple_repeat Simple_repeat 1 27 0 590 234 66 75 chr18 20125224 20125451 -65863483 - MIR SINE MIR -15 247 23 209 184 102 0 chr18 20125970 20126019 -65862915 - MIR SINE MIR -30 232 179 2197 109 3 7 chr18 20126129 20126431 -65862503 - AluSx SINE Alu -11 301 1 796 229 83 21 chr18 20127596 20127836 -65861098 + MIR SINE MIR 8 262 0 755 212 23 0 chr18 20127966 20128098 -65860836 - FLAM_A SINE Alu -2 140 6 572 316 34 19 chr18 20128248 20128454 -65860480 + MLT1L LTR MaLR 5 213 -402 595 285 49 42 chr18 20128523 20128807 -65860127 + MLT1L LTR MaLR 322 607 -8 1252 272 87 47 chr18 20128911 20129114 -65859820 + L2 LINE L2 2468 2661 -652 887 221 15 5 chr18 20129114 20129318 -65859616 - L1MB4 LINE L1 -6 6174 5969 1252 272 87 47 chr18 20129318 20129768 -65859166 + L2 LINE L2 2661 3152 -161 1676 153 68 7 chr18 20129781 20130088 -65858846 - L1MC3 LINE L1 -170 7615 7290 505 242 47 34 chr18 20130089 20130238 -65858696 + L2 LINE L2 3158 3308 -5 349 299 43 58 chr18 20132184 20132391 -65856543 - MIR SINE MIR -3 259 56 251 293 57 32 chr18 20133337 20133460 -65855474 - MIR SINE MIR -64 198 73 1446 200 56 56 chr18 20133470 20133860 -65855074 - MLT1B LTR MaLR 0 390 1 188 276 47 94 chr18 20133940 20134067 -65854867 + L2 LINE L2 2992 3112 -160 983 167 0 19 chr18 20134413 20134575 -65854359 - AluJb SINE Alu -14 298 140 2016 141 7 3 chr18 20134587 20134886 -65854048 - AluSx SINE Alu -12 300 1 199 333 137 12 chr18 20135702 20135870 -65853064 + L3 LINE CR1 1388 1576 -1 260 325 48 0 chr18 20136637 20136720 -65852214 + MIR SINE MIR 38 124 -138 305 315 44 44 chr18 20136750 20136953 -65851981 + L2 LINE L2 931 1133 -2181 4627 181 35 13 chr18 20139120 20140223 -65848711 - L1MB8 LINE L1 0 6178 5048 1290 216 8 41 chr18 20140222 20140584 -65848350 - L1MB8 LINE L1 -3532 2614 2265 * 1437 218 101 86 chr18 20140648 20140764 -65848170 + L1ME3A LINE L1 5625 5738 -432 2675 23 0 0 chr18 20140764 20141063 -65847871 - AluY SINE Alu -12 299 1 1437 218 101 86 chr18 20141063 20141432 -65847502 + L1ME3A LINE L1 5738 6117 -53 531 311 130 17 chr18 20141487 20141899 -65847035 + L1MC1 LINE L1 3609 4065 -2081 195 42 0 0 chr18 20142224 20142248 -65846686 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 2401 177 21 14 chr18 20143023 20143446 -65845488 - MSTB LTR MaLR 0 426 1 398 306 147 34 chr18 20143682 20144305 -65844629 + L2 LINE L2 2617 3310 -3 5939 178 27 40 chr18 20144359 20146364 -65842570 + L1MC1 LINE L1 4353 6328 -5 243 0 0 0 chr18 20146720 20146747 -65842187 + (T)n Simple_repeat Simple_repeat 1 27 0 494 295 145 52 chr18 20146928 20147739 -65841195 + L2 LINE L2 2194 3112 -160 224 317 0 0 chr18 20148234 20148294 -65840640 + T-rich Low_complexity Low_complexity 2 61 0 305 248 103 26 chr18 20148564 20148681 -65840253 + L2 LINE L2 3144 3269 -3 1831 227 82 14 chr18 20148750 20149239 -65839695 - L2 LINE L2 -463 2851 2330 813 224 43 5 chr18 20149239 20149449 -65839485 - L2 LINE L2 -1212 2102 1885 25 51 0 0 chr18 20151989 20152028 -65836906 + AT_rich Low_complexity Low_complexity 1 39 0 583 241 138 20 chr18 20152061 20152256 -65836678 + MIR SINE MIR 45 262 0 239 314 89 0 chr18 20152402 20152526 -65836408 - L1MC4 LINE L1 0 8042 7908 563 299 5 14 chr18 20152632 20152839 -65836095 - L1MC4 LINE L1 -131 7911 7707 276 310 20 0 chr18 20153117 20153217 -65835717 - L1ME LINE L1 -502 5619 5518 285 335 26 0 chr18 20153616 20153771 -65835163 + L1ME4a LINE L1 5726 5884 -237 279 343 134 54 chr18 20155411 20155875 -65833059 - L2 LINE L2 -377 2937 2437 447 231 27 88 chr18 20156295 20156442 -65832492 - MIR SINE MIR -15 247 110 1432 157 68 0 chr18 20156611 20156904 -65832030 + Charlie5 DNA MER1_type 2234 2546 -66 1648 156 27 23 chr18 20157004 20157305 -65831629 - AluJo SINE Alu -10 302 1 217 345 9 9 chr18 20157389 20157499 -65831435 + MIR SINE MIR 77 186 -76 1034 217 84 69 chr18 20157545 20157877 -65831057 + MER46C DNA MER2_type 1 337 -1 390 340 98 10 chr18 20158823 20159026 -65829908 + MIR SINE MIR 16 236 -26 214 250 188 10 chr18 20160137 20160233 -65828701 - MIR SINE MIR -126 136 24 213 211 0 0 chr18 20160392 20160430 -65828504 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 381 22 0 0 chr18 20160447 20160493 -65828441 + (CA)n Simple_repeat Simple_repeat 1 46 0 208 135 27 0 chr18 20160973 20161010 -65827924 + L3 LINE CR1 1230 1267 -310 180 0 0 0 chr18 20161932 20161952 -65826982 + (CAAAC)n Simple_repeat Simple_repeat 2 21 0 299 266 91 28 chr18 20162478 20162621 -65826313 + MIR SINE MIR 29 180 -82 2154 87 48 0 chr18 20163742 20164031 -65824903 + AluY SINE Alu 1 303 -8 180 0 0 0 chr18 20164169 20164189 -65824745 + (A)n Simple_repeat Simple_repeat 1 20 0 523 248 18 0 chr18 20164707 20164816 -65824118 + MER81 DNA DNA 1 111 -3 204 207 172 35 chr18 20164848 20164935 -65823999 + MIR SINE MIR 48 146 -62 2537 104 31 0 chr18 20165061 20165417 -65823517 + L1PA16 LINE L1 5419 5785 -381 7042 93 9 0 chr18 20165417 20167734 -65821200 + L1PA13 LINE L1 3772 6159 -4 2336 107 26 14 chr18 20167734 20168080 -65820854 + L1PA16 LINE L1 5777 6126 -40 899 101 0 0 chr18 20168180 20168299 -65820635 - AluSq/x SINE Alu -193 119 1 26 0 0 0 chr18 20168512 20168538 -65820396 + AT_rich Low_complexity Low_complexity 1 26 0 357 274 8 34 chr18 20168550 20168667 -65820267 + MIR SINE MIR 34 147 -115 27 0 0 0 chr18 20170068 20170095 -65818839 + AT_rich Low_complexity Low_complexity 1 27 0 212 313 150 7 chr18 20170655 20170802 -65818132 + MIR3 SINE MIR 6 173 -35 523 312 136 38 chr18 20170974 20171371 -65817563 + L2 LINE L2 2877 3312 -1 198 0 0 0 chr18 20171452 20171474 -65817460 + (A)n Simple_repeat Simple_repeat 1 22 0 190 297 158 89 chr18 20171891 20172137 -65816797 + L2 LINE L2 3009 3271 -1 1056 191 62 14 chr18 20172889 20173098 -65815836 - MER20 DNA MER1_type 0 219 1 199 300 20 0 chr18 20173230 20173280 -65815654 - L2 LINE L2 -26 3287 3237 307 331 34 54 chr18 20173296 20173444 -65815490 - MIR3 SINE MIR -61 147 3 799 240 16 16 chr18 20173858 20174041 -65814893 + MER58C DNA MER1_type 11 193 -22 1540 189 32 4 chr18 20174107 20174387 -65814547 + AluJb SINE Alu 1 288 -24 1448 241 80 12 chr18 20174581 20174992 -65813942 - MLT1J1 LTR MaLR -6 440 2 4263 188 53 46 chr18 20175114 20175998 -65812936 + L1MA4A LINE L1 2 891 -5958 1843 117 18 4 chr18 20175992 20176273 -65812661 - L1M2 LINE L1 -4338 2511 2227 * 534 194 93 0 chr18 20176270 20176399 -65812535 + L1MA4A LINE L1 2096 2236 -4613 * 16172 165 21 7 chr18 20176397 20180515 -65808419 + L1MA4A LINE L1 2497 6688 -317 3222 145 23 4 chr18 20180515 20180992 -65807942 + MER66B LTR ERV1 1 486 0 16172 165 21 7 chr18 20180992 20181310 -65807624 + L1MA4A LINE L1 6688 7000 -5 410 268 57 19 chr18 20182257 20182414 -65806520 - L1ME4a LINE L1 -4 6117 5955 23 33 0 0 chr18 20182449 20182479 -65806455 + AT_rich Low_complexity Low_complexity 1 30 0 363 233 56 0 chr18 20182521 20182611 -65806323 + L2 LINE L2 2622 2716 -598 300 206 76 11 chr18 20182619 20182711 -65806223 - L1ME4a LINE L1 -60 6061 5964 191 236 0 45 chr18 20183378 20183467 -65805467 + (TATATG)n Simple_repeat Simple_repeat 3 87 0 270 268 12 0 chr18 20183490 20183572 -65805362 + (TA)n Simple_repeat Simple_repeat 2 84 0 349 281 190 24 chr18 20183652 20183947 -65804987 - L2 LINE L2 -670 2644 2301 307 319 118 17 chr18 20184221 20184340 -65804594 - L2 LINE L2 0 3272 3142 183 352 23 11 chr18 20184887 20184975 -65803959 + MIR SINE MIR 59 147 -115 274 368 69 17 chr18 20185295 20185469 -65803465 + MIR3 SINE MIR 10 192 -16 212 333 0 72 chr18 20185621 20185732 -65803202 + MIR SINE MIR 3 105 -157 2114 82 50 0 chr18 20185735 20186014 -65802920 + AluY SINE Alu 12 304 -7 285 246 59 100 chr18 20186280 20186601 -65802333 + L1MC/D LINE L1 2722 3029 -3117 356 280 93 39 chr18 20186695 20186952 -65801982 + L1MC/D LINE L1 4398 4668 -1478 956 259 65 64 chr18 20187473 20188053 -65800881 + L1MEd LINE L1 532 1112 -5007 302 275 44 22 chr18 20188164 20188255 -65800679 + HAL1 LINE L1 1364 1456 -1051 22 0 0 0 chr18 20188681 20188703 -65800231 + AT_rich Low_complexity Low_complexity 1 22 0 183 42 0 0 chr18 20188872 20188896 -65800038 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1109 280 85 6 chr18 20188899 20189263 -65799671 + L1MC/D LINE L1 5370 5762 -2046 750 218 64 60 chr18 20190109 20190343 -65798591 + MER106A DNA MER1_type 1 235 -1 441 295 63 66 chr18 20190343 20190562 -65798372 + L2 LINE L2 2293 2514 -800 2348 125 33 41 chr18 20190562 20190929 -65798005 - THE1B LTR MaLR 0 364 1 441 295 63 66 chr18 20190929 20191126 -65797808 + L2 LINE L2 2514 2710 -604 318 389 67 27 chr18 20191595 20191970 -65796964 - L2 LINE L2 -32 3281 2892 357 255 128 0 chr18 20193154 20193248 -65795686 + L2 LINE L2 3203 3308 -5 360 284 94 8 chr18 20193264 20193391 -65795543 - MIR3 SINE MIR -49 159 22 511 107 27 0 chr18 20194438 20194513 -65794421 - Tigger7 DNA MER2_type -23 2564 2488 * 1480 176 47 0 chr18 20194510 20194765 -65794169 - Tigger7 DNA MER2_type -2220 267 1 1831 164 29 61 chr18 20194792 20195169 -65793765 + MLT1A1 LTR MaLR 1 365 0 1222 149 5 0 chr18 20195212 20195420 -65793514 - L1M1 LINE L1 -7294 271 63 24 0 0 0 chr18 20195635 20195659 -65793275 + AT_rich Low_complexity Low_complexity 1 24 0 252 0 0 0 chr18 20196834 20196862 -65792072 + (CA)n Simple_repeat Simple_repeat 1 28 0 764 287 35 57 chr18 20199456 20199860 -65789074 - LTR16C LTR ERVL -96 395 1 190 297 158 89 chr18 20200001 20200247 -65788687 + L2 LINE L2 3009 3271 -1 1056 191 62 14 chr18 20200999 20201208 -65787726 - MER20 DNA MER1_type 0 219 1 199 300 20 0 chr18 20201340 20201390 -65787544 - L2 LINE L2 -26 3287 3237 307 331 34 54 chr18 20201406 20201554 -65787380 - MIR3 SINE MIR -61 147 3 799 240 16 16 chr18 20201968 20202151 -65786783 + MER58C DNA MER1_type 11 193 -22 1540 189 32 4 chr18 20202217 20202497 -65786437 + AluJb SINE Alu 1 288 -24 1448 241 80 12 chr18 20202691 20203102 -65785832 - MLT1J1 LTR MaLR -6 440 2 4263 188 53 46 chr18 20203224 20204108 -65784826 + L1MA4A LINE L1 2 891 -5958 1843 117 18 4 chr18 20204102 20204383 -65784551 - L1M2 LINE L1 -4338 2511 2227 * 534 194 93 0 chr18 20204380 20204509 -65784425 + L1MA4A LINE L1 2096 2236 -4613 * 10967 166 20 6 chr18 20204507 20208625 -65780309 + L1MA4A LINE L1 2497 6688 -317 3004 143 23 4 chr18 20208625 20209102 -65779832 + MER66B LTR ERV1 1 486 0 10967 166 20 6 chr18 20209102 20209420 -65779514 + L1MA4A LINE L1 6688 7000 -5 339 268 57 19 chr18 20210367 20210524 -65778410 - L1ME4a LINE L1 -4 6117 5955 23 33 0 0 chr18 20210559 20210589 -65778345 + AT_rich Low_complexity Low_complexity 1 30 0 359 233 56 0 chr18 20210631 20210721 -65778213 + L2 LINE L2 2622 2716 -598 257 206 76 11 chr18 20210729 20210821 -65778113 - L1ME4a LINE L1 -60 6061 5964 191 236 0 45 chr18 20211488 20211577 -65777357 + (TATATG)n Simple_repeat Simple_repeat 3 87 0 270 268 12 0 chr18 20211600 20211682 -65777252 + (TA)n Simple_repeat Simple_repeat 2 84 0 366 309 183 17 chr18 20211762 20212057 -65776877 - L2 LINE L2 -670 2644 2301 309 319 118 17 chr18 20212331 20212450 -65776484 - L2 LINE L2 0 3272 3142 184 352 23 11 chr18 20212997 20213085 -65775849 + MIR SINE MIR 59 147 -115 280 368 69 17 chr18 20213405 20213579 -65775355 + MIR3 SINE MIR 10 192 -16 253 333 13 65 chr18 20213731 20213884 -65775050 + MIR SINE MIR 3 147 -115 1649 186 33 26 chr18 20214081 20214415 -65774519 - AluJo SINE Alu 0 338 3 270 234 47 0 chr18 20214458 20214522 -65774412 + MIR3 SINE MIR 110 176 -32 393 231 61 88 chr18 20214528 20214675 -65774259 - MARNA DNA Mariner -374 212 70 23 33 0 0 chr18 20214690 20214720 -65774214 + AT_rich Low_complexity Low_complexity 1 30 0 181 250 0 0 chr18 20216590 20216626 -65772308 + L2 LINE L2 3267 3302 -11 504 323 13 0 chr18 20216736 20216894 -65772040 + MIR3 SINE MIR 41 200 -8 24 0 0 0 chr18 20217485 20217509 -65771425 + AT_rich Low_complexity Low_complexity 1 24 0 1665 209 17 92 chr18 20217511 20218017 -65770917 - L1MA9 LINE L1 -40 6272 5831 396 0 0 0 chr18 20218017 20218061 -65770873 + (TAGA)n Simple_repeat Simple_repeat 3 46 0 1665 209 17 92 chr18 20218061 20218279 -65770655 - L1MA9 LINE L1 -481 5831 5598 1209 198 5 0 chr18 20218282 20218484 -65770450 - AluJb SINE Alu -23 289 87 713 214 13 0 chr18 20218485 20218644 -65770290 - L1MA9 LINE L1 -707 5605 5445 206 279 0 0 chr18 20219265 20219326 -65769608 + (CA)n Simple_repeat Simple_repeat 1 61 0 529 267 56 28 chr18 20219485 20219665 -65769269 - MIR3 SINE MIR -7 201 17 459 52 0 0 chr18 20219814 20219872 -65769062 + (CA)n Simple_repeat Simple_repeat 1 58 0 4673 215 63 27 chr18 20222093 20222240 -65766694 + L1MD1 LINE L1 2205 2345 -3897 3056 59 8 0 chr18 20222240 20222628 -65766306 - L1PA8 LINE L1 0 6172 5782 4673 215 63 27 chr18 20222628 20225167 -65763767 + L1MD1 LINE L1 2345 5107 -1135 1824 150 7 46 chr18 20225167 20225474 -65763460 + AluSx SINE Alu 2 296 -16 4673 215 63 27 chr18 20225474 20226653 -65762281 + L1MD1 LINE L1 5107 6242 0 3097 213 65 41 chr18 20226636 20227021 -65761913 + L1ME1 LINE L1 4358 4732 -1434 * 2226 89 0 42 chr18 20227021 20227334 -65761600 + AluY SINE Alu 1 300 -11 3097 213 65 41 chr18 20227334 20228696 -65760238 + L1ME1 LINE L1 4732 6141 -25 481 218 55 36 chr18 20228711 20228876 -65760058 + L1ME4a LINE L1 4946 5113 -1033 266 284 53 0 chr18 20228936 20229031 -65759903 + MER5B DNA MER1_type 1 100 -78 510 61 0 0 chr18 20230168 20230234 -65758700 + (TAGA)n Simple_repeat Simple_repeat 2 67 0 225 226 0 0 chr18 20231161 20231214 -65757720 + L2 LINE L2 3261 3313 0 265 358 46 4 chr18 20231349 20231550 -65757384 - MIR SINE MIR -48 214 9 364 383 131 22 chr18 20231860 20232134 -65756800 + L2 LINE L2 2969 3272 0 283 365 41 21 chr18 20232380 20232525 -65756409 + L2 LINE L2 3125 3272 0 481 296 123 42 chr18 20232534 20233028 -65755906 + L1ME4a LINE L1 5550 6089 -32 2403 92 0 0 chr18 20233036 20233341 -65755593 - AluY SINE Alu -5 306 2 1491 258 36 18 chr18 20233377 20233826 -65755108 + L1MEc LINE L1 34 490 -5906 3459 232 18 68 chr18 20233852 20234096 -65754838 - L1M4 LINE L1 -2652 3992 3737 192 40 0 0 chr18 20234096 20234121 -65754813 + (CA)n Simple_repeat Simple_repeat 1 25 0 3459 232 18 68 chr18 20234121 20234435 -65754499 - L1M4 LINE L1 -2907 3737 3409 1693 134 0 11 chr18 20234435 20234710 -65754224 + L1PA15 LINE L1 5889 6160 -5 3459 232 18 68 chr18 20234710 20235718 -65753216 - L1M4 LINE L1 -3235 3409 2484 2203 245 85 49 chr18 20235793 20236548 -65752386 - L1M4 LINE L1 -4551 2095 1369 1996 130 24 56 chr18 20236548 20236924 -65752010 - THE1B LTR MaLR 0 364 1 2203 245 85 49 chr18 20236924 20237546 -65751388 - L1M4 LINE L1 -5277 1369 771 186 43 0 0 chr18 20237546 20237569 -65751365 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 2203 245 85 49 chr18 20237569 20238030 -65750904 - L1M4 LINE L1 -5875 771 76 6552 163 6 1 chr18 20238034 20240374 -65748560 - L1PA13 LINE L1 0 7601 5210 1011 133 13 0 chr18 20240374 20240532 -65748402 - L1P4 LINE L1 -381 5785 5626 * 1434 102 4 0 chr18 20240528 20240753 -65748181 - L1P4 LINE L1 -817 5329 5104 9262 154 36 15 chr18 20240764 20242527 -65746407 - L1PA13 LINE L1 -4964 2620 8 385 254 36 59 chr18 20242611 20242831 -65746103 - L1MC4a LINE L1 -1863 5945 5731 375 255 26 157 chr18 20242861 20243128 -65745806 - MIR3 SINE MIR -26 236 2 23 33 0 0 chr18 20243599 20243629 -65745305 + AT_rich Low_complexity Low_complexity 1 30 0 899 178 5 16 chr18 20243765 20243956 -65744978 + MER53 DNA DNA 1 189 0 274 0 0 0 chr18 20244947 20244979 -65743955 - L1PA7 LINE L1 -15 6139 6108 25 65 0 0 chr18 20245471 20245517 -65743417 + AT_rich Low_complexity Low_complexity 1 46 0 259 264 177 0 chr18 20245684 20245798 -65743136 - MIR SINE MIR -63 145 37 1655 107 8 0 chr18 20246782 20247034 -65741900 + L1MA1 LINE L1 6049 6302 0 30 59 0 0 chr18 20249127 20249178 -65739756 + AT_rich Low_complexity Low_complexity 1 51 0 2380 96 3 6 chr18 20249666 20249978 -65738956 + AluSq SINE Alu 1 311 -2 367 337 38 31 chr18 20250419 20250680 -65738254 - L2 LINE L2 -1021 2293 2031 661 161 9 0 chr18 20250860 20250972 -65737962 + FLAM_A SINE Alu 20 132 -10 360 263 38 114 chr18 20252039 20252225 -65736709 + MIR SINE MIR 13 186 -63 222 291 0 0 chr18 20252524 20252579 -65736355 - MIR SINE MIR -157 105 51 2207 114 0 10 chr18 20252981 20253288 -65735646 + AluSx SINE Alu 1 304 -8 1848 134 7 17 chr18 20253810 20254102 -65734832 + AluSx SINE Alu 1 289 -23 1715 185 3 3 chr18 20254271 20254581 -65734353 + AluJo SINE Alu 1 312 0 2125 107 40 0 chr18 20255535 20255833 -65733101 + AluSg SINE Alu 1 310 0 186 133 0 0 chr18 20255995 20256025 -65732909 + (T)n Simple_repeat Simple_repeat 1 30 0 40954 34 21 1 chr18 20256172 20262200 -65726734 + L1PA2 LINE L1 1 6148 -7 207 114 0 0 chr18 20262207 20262242 -65726692 + (A)n Simple_repeat Simple_repeat 1 35 0 1625 136 80 46 chr18 20262534 20262836 -65726098 - AluJb SINE Alu 0 312 1 205 171 0 0 chr18 20263082 20263117 -65725817 + T-rich Low_complexity Low_complexity 1 35 0 321 100 0 0 chr18 20263647 20263697 -65725237 + (TG)n Simple_repeat Simple_repeat 2 51 0 215 213 149 0 chr18 20264544 20264591 -65724343 - MIR SINE MIR -14 248 195 1540 165 92 6 chr18 20265841 20266187 -65722747 + L1MB8 LINE L1 5798 6173 -5 307 218 77 0 chr18 20266316 20266394 -65722540 + L2 LINE L2 3224 3307 -6 187 98 82 0 chr18 20266490 20266551 -65722383 + (TA)n Simple_repeat Simple_repeat 1 66 0 195 213 227 0 chr18 20266589 20266664 -65722270 - MIR SINE MIR -2 260 169 423 97 32 0 chr18 20266855 20266917 -65722017 - AluJ/FRAM SINE Alu -17 295 232 399 221 82 49 chr18 20269076 20269198 -65719736 - MIR SINE MIR -63 145 20 2122 151 35 28 chr18 20269288 20269329 -65719605 - L1MB3 LINE L1 -9 6174 6135 1998 131 0 14 chr18 20269329 20269626 -65719308 - AluSg SINE Alu -17 293 1 2122 151 35 28 chr18 20269626 20269967 -65718967 - L1MB3 LINE L1 -48 6135 5786 339 44 0 0 chr18 20269967 20270012 -65718922 + (TG)n Simple_repeat Simple_repeat 2 46 0 2122 151 35 28 chr18 20270012 20270060 -65718874 - L1MB3 LINE L1 -397 5786 5740 21 0 0 0 chr18 20270081 20270102 -65718832 + AT_rich Low_complexity Low_complexity 1 21 0 227 273 55 0 chr18 20270279 20270334 -65718600 + L2 LINE L2 3248 3305 -8 1375 183 17 52 chr18 20270410 20270755 -65718179 - L1MA9 LINE L1 -83 6229 5897 402 289 75 97 chr18 20270864 20271410 -65717524 - LTR67 LTR ERVL -1 556 23 457 221 29 29 chr18 20272747 20272883 -65716051 - MER117 DNA MER1_type -56 141 6 3163 248 124 38 chr18 20273912 20275889 -65713045 - HAL1 LINE L1 -111 2396 249 2415 169 42 2 chr18 20276150 20276599 -65712335 - MLT1C LTR MaLR 0 467 1 225 0 0 0 chr18 20276949 20276974 -65711960 + (TATG)n Simple_repeat Simple_repeat 4 28 0 28 0 0 0 chr18 20277056 20277084 -65711850 + AT_rich Low_complexity Low_complexity 1 28 0 794 278 15 22 chr18 20277782 20278106 -65710828 - L1ME4a LINE L1 -202 5919 5598 264 299 83 0 chr18 20278191 20278348 -65710586 - L1ME4a LINE L1 -1520 4626 4457 1683 160 17 14 chr18 20278689 20278976 -65709958 + AluJo SINE Alu 1 288 -24 288 226 90 98 chr18 20279198 20279432 -65709502 - Charlie8 DNA MER1_type -2146 271 40 2521 57 0 0 chr18 20279561 20279859 -65709075 + AluY SINE Alu 1 298 -13 331 304 100 77 chr18 20280185 20280697 -65708237 - L1ME4a LINE L1 -2660 3486 2948 2310 111 0 0 chr18 20280697 20281003 -65707931 - AluSg1 SINE Alu -1 308 3 331 304 100 77 chr18 20281003 20281270 -65707664 - L1ME4a LINE L1 -3198 2948 2689 21 0 0 0 chr18 20281483 20281504 -65707430 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr18 20281692 20281715 -65707219 + (TA)n Simple_repeat Simple_repeat 1 23 0 289 351 40 10 chr18 20281729 20281931 -65707003 - HAL1b LINE L1 -699 649 442 2148 256 80 47 chr18 20282296 20282334 -65706600 - L1ME3 LINE L1 -21 6141 6106 3723 49 8 6 chr18 20282334 20282803 -65706131 - L1PA7 LINE L1 -3 6151 5682 2148 256 80 47 chr18 20282803 20283959 -65704975 - L1ME3 LINE L1 -56 6106 4886 594 164 8 8 chr18 20284012 20284146 -65704788 - L1MA4 LINE L1 -4 6296 6163 2138 76 17 7 chr18 20285280 20285568 -65703366 + AluY SINE Alu 1 291 -20 1209 232 12 48 chr18 20285918 20286331 -65702603 - L1ME3 LINE L1 -1292 4854 4457 25 95 0 0 chr18 20286391 20286465 -65702469 + AT_rich Low_complexity Low_complexity 1 74 0 1074 282 75 34 chr18 20286499 20287124 -65701810 - L1ME4a LINE L1 -158 5963 5313 2274 121 0 0 chr18 20287386 20287684 -65701250 + AluSx SINE Alu 1 298 -14 649 234 36 16 chr18 20288101 20288293 -65700641 + HAL1b LINE L1 381 576 -772 632 138 8 0 chr18 20288453 20288583 -65700351 + (TAGA)n Simple_repeat Simple_repeat 2 132 0 333 47 0 0 chr18 20289858 20289901 -65699033 + (CA)n Simple_repeat Simple_repeat 2 44 0 285 286 14 56 chr18 20289906 20290119 -65698815 + HAL1b LINE L1 684 887 -461 312 286 73 47 chr18 20290926 20291118 -65697816 + L1M4 LINE L1 2322 2518 -3628 226 331 62 28 chr18 20292064 20292496 -65696438 + L1M4 LINE L1 2557 3003 -3143 1743 132 21 3 chr18 20292550 20292839 -65696095 + L1PA10 LINE L1 5875 6168 0 1912 170 45 38 chr18 20342857 20343096 -65645838 - MSTB LTR MaLR 0 426 181 3539 118 35 0 chr18 20343096 20343605 -65645329 - MER1A DNA MER1_type 0 527 1 1912 170 45 38 chr18 20343605 20343788 -65645146 - MSTB LTR MaLR -245 181 1 8844 161 26 11 chr18 20343794 20345414 -65643520 - MSTB-int LTR MaLR -6 1645 2 2402 150 33 19 chr18 20345416 20345452 -65643482 - MSTB LTR MaLR -1 425 391 1988 153 3 0 chr18 20345452 20345746 -65643188 + AluSx SINE Alu 1 295 -17 2402 150 33 19 chr18 20345746 20346128 -65642806 - MSTB LTR MaLR -35 391 1 3770 249 43 45 chr18 20346172 20346584 -65642350 + L2 LINE L2 1789 2200 -1113 583 243 16 54 chr18 20346584 20346769 -65642165 - MER5B DNA MER1_type 0 178 1 3770 249 43 45 chr18 20346769 20347886 -65641048 + L2 LINE L2 2200 3312 -1 213 154 0 0 chr18 20348381 20348420 -65640514 + (TG)n Simple_repeat Simple_repeat 2 40 0 1783 99 4 0 chr18 20350020 20350253 -65638681 - AluSc SINE Alu -19 290 57 394 253 58 13 chr18 20350515 20350669 -65638265 + L1MB8 LINE L1 11 171 -6688 237 300 20 67 chr18 20350775 20350925 -65638009 + L1MB8 LINE L1 798 940 -5915 1398 239 21 15 chr18 20350933 20351406 -65637528 + L1MB8 LINE L1 4023 4498 -2459 * 2912 214 60 22 chr18 20351390 20352113 -65636821 + L1MB8 LINE L1 6238 6987 -2 355 200 24 59 chr18 20352143 20352228 -65636706 + L2 LINE L2 3191 3272 0 363 329 68 36 chr18 20352400 20352619 -65636315 + HAL1b LINE L1 392 617 -731 373 188 12 0 chr18 20352619 20352704 -65636230 - MLT1I LTR MaLR -2 407 322 319 284 0 28 chr18 20352836 20352945 -65635989 - MLT1I LTR MaLR -272 137 32 498 222 57 62 chr18 20352945 20353121 -65635813 + L1MDb LINE L1 129 303 -6106 523 270 137 15 chr18 20353233 20353376 -65635558 - MLT1J2 LTR MaLR -143 307 183 303 93 0 0 chr18 20353376 20353419 -65635515 + (CA)n Simple_repeat Simple_repeat 1 43 0 523 270 137 15 chr18 20353419 20353538 -65635396 - MLT1J2 LTR MaLR -267 183 13 468 341 51 53 chr18 20353705 20354274 -65634660 + L1MC4a LINE L1 4150 4717 -1429 1842 226 38 29 chr18 20354312 20354791 -65634143 - MLT1D LTR MaLR 0 505 23 698 270 85 28 chr18 20354896 20355917 -65633017 + L1MC4a LINE L1 4815 5793 -328 366 244 66 118 chr18 20356954 20357377 -65631557 + MLT1K LTR MaLR 188 588 0 859 241 14 14 chr18 20357433 20357649 -65631285 + MIR SINE MIR 47 262 0 30 45 0 0 chr18 20357670 20357714 -65631220 + AT_rich Low_complexity Low_complexity 1 44 0 461 308 133 0 chr18 20357756 20357967 -65630967 - MIR SINE MIR -3 259 21 1216 276 64 10 chr18 20358177 20358586 -65630348 + MLT2F LTR ERVL 4 434 -229 1015 292 23 12 chr18 20358594 20358936 -65629998 - L1ME3A LINE L1 -296 5874 5529 * 1301 289 59 45 chr18 20358930 20359638 -65629296 - L1ME3A LINE L1 -905 5241 4524 2854 193 35 16 chr18 20359709 20360341 -65628593 + L1MC4a LINE L1 7160 7803 -5 1053 286 70 24 chr18 20360363 20361065 -65627869 - L1ME3A LINE L1 -2493 3653 2920 2163 119 0 0 chr18 20361066 20361360 -65627574 + AluSx SINE Alu 1 294 -18 1826 172 0 0 chr18 20361978 20362274 -65626660 + AluJo SINE Alu 16 311 -1 206 118 0 29 chr18 20362274 20362308 -65626626 + (GA)n Simple_repeat Simple_repeat 1 33 0 570 29 0 0 chr18 20362309 20362377 -65626557 + (GGAA)n Simple_repeat Simple_repeat 1 68 0 2240 52 0 75 chr18 20363673 20364018 -65624916 + AluY SINE Alu 1 322 0 1383 109 9 55 chr18 20364850 20364940 -65623994 - MER2 DNA MER2_type -135 210 117 2139 139 0 0 chr18 20364940 20365242 -65623692 + AluSx SINE Alu 1 302 -10 1383 109 9 55 chr18 20365242 20365371 -65623563 - MER2 DNA MER2_type -228 117 1 225 233 0 0 chr18 20367300 20367343 -65621591 + 5S rRNA rRNA 1 43 -78 233 226 81 0 chr18 20367765 20367827 -65621107 - L3 LINE CR1 -8 1569 1503 23 0 0 0 chr18 20367848 20367871 -65621063 + AT_rich Low_complexity Low_complexity 1 23 0 451 327 26 0 chr18 20367876 20368029 -65620905 + MIR3 SINE MIR 49 205 -3 4179 137 42 30 chr18 20368043 20368774 -65620160 + Tigger2 DNA MER2_type 5 744 -1974 2237 78 7 3 chr18 20369004 20369298 -65619636 - AluSc SINE Alu -14 295 1 1532 121 30 0 chr18 20369298 20369529 -65619405 + Tigger2 DNA MER2_type 2480 2717 -1 2394 81 0 0 chr18 20370011 20370307 -65618627 + AluSg SINE Alu 1 296 -14 192 40 0 0 chr18 20371332 20371357 -65617577 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 727 140 0 0 chr18 20371514 20371621 -65617313 + U6 snRNA snRNA 1 107 0 712 51 51 0 chr18 20371623 20371721 -65617213 + L1PA11 LINE L1 6072 6174 0 7560 30 0 1 chr18 20371825 20373352 -65615582 - L1PA3 LINE L1 0 6155 4629 2482 82 0 0 chr18 20373379 20373683 -65615251 + AluSx SINE Alu 3 306 -6 381 307 57 5 chr18 20373686 20373908 -65615026 + L1MC4a LINE L1 5613 5824 -297 4963 189 39 19 chr18 20374113 20376184 -65612750 - L1MB7 LINE L1 -9 6175 4064 419 214 10 0 chr18 20376182 20376280 -65612654 - L1MEc LINE L1 -4071 2325 2227 * 210 259 17 0 chr18 20376280 20376338 -65612596 + (CATATA)n Simple_repeat Simple_repeat 1 59 0 6122 251 45 45 chr18 20376339 20377774 -65611160 - L1MEc LINE L1 -4150 2246 811 2320 99 3 3 chr18 20377774 20378078 -65610856 - AluSp SINE Alu -9 304 1 6122 251 45 45 chr18 20378078 20378851 -65610083 - L1MEc LINE L1 -5585 811 39 1127 267 98 69 chr18 20378894 20379432 -65609502 - MLT1G1 LTR MaLR 0 595 1 1359 276 139 18 chr18 20379436 20380242 -65608692 - HAL1 LINE L1 -1581 926 1 2374 84 0 0 chr18 20380547 20380846 -65608088 + AluY SINE Alu 1 299 -12 534 274 20 0 chr18 20381250 20381396 -65607538 - L1MC5 LINE L1 -69 7892 7744 2422 137 32 24 chr18 20381511 20382007 -65606927 - L1PA15-16 LINE L1 -4582 2267 1768 12105 223 23 41 chr18 20382023 20384212 -65604722 + L1 LINE L1 1610 3836 -2310 12261 27 0 0 chr18 20384212 20386456 -65602478 + L1PA3 LINE L1 3936 6182 0 12105 223 23 41 chr18 20386456 20387119 -65601815 + L1 LINE L1 3836 4398 -1748 324 0 0 0 chr18 20387119 20387155 -65601779 + (CA)n Simple_repeat Simple_repeat 1 36 0 12105 223 23 41 chr18 20387155 20387890 -65601044 + L1 LINE L1 4398 5144 -1002 5608 105 11 13 chr18 20387890 20388752 -65600182 - L1PA13 LINE L1 -1 6162 5273 2032 146 133 16 chr18 20388752 20389135 -65599799 + MSTA LTR MaLR 1 428 0 5608 105 11 13 chr18 20389135 20389702 -65599232 - L1PA13 LINE L1 -890 5273 4707 500 29 112 16 chr18 20389710 20389952 -65598982 + (TA)n Simple_repeat Simple_repeat 1 265 0 2055 171 5 3 chr18 20389952 20390326 -65598608 + L1PB4 LINE L1 5782 6156 0 342 284 12 0 chr18 20390630 20390711 -65598223 + L2 LINE L2 3191 3272 0 321 194 15 0 chr18 20392411 20392478 -65596456 + MIR SINE MIR 66 133 -75 1381 278 65 33 chr18 20392723 20393289 -65595645 - L2 LINE L2 0 3313 2707 2477 72 0 0 chr18 20393289 20393596 -65595338 + AluY SINE Alu 1 307 -4 1381 278 65 33 chr18 20393596 20393864 -65595070 - L2 LINE L2 -606 2707 2449 290 310 47 8 chr18 20393903 20394032 -65594902 - HERVL LTR ERVL -1666 3988 3855 3862 245 56 23 chr18 20394250 20395401 -65593533 - L1MCb LINE L1 -4851 1194 6 311 285 91 32 chr18 20395432 20395685 -65593249 + L1M4 LINE L1 4500 4767 -1379 418 317 40 43 chr18 20395975 20396300 -65592634 - L1M4 LINE L1 -3049 3097 2774 300 356 56 19 chr18 20396307 20396467 -65592467 + HAL1 LINE L1 1546 1711 -796 2263 182 86 33 chr18 20396601 20396646 -65592288 - MLT2B1 LTR ERVL 0 520 479 2700 128 4 46 chr18 20396646 20397099 -65591835 + Tigger2a DNA MER2_type 1 434 0 2263 182 86 33 chr18 20397099 20397542 -65591392 - MLT2B1 LTR ERVL -41 479 6 21 57 0 0 chr18 20397679 20397714 -65591220 + AT_rich Low_complexity Low_complexity 1 35 0 183 42 0 0 chr18 20397783 20397807 -65591127 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 196 183 17 17 chr18 20397807 20397867 -65591067 + GA-rich Low_complexity Low_complexity 3 62 0 1585 225 44 36 chr18 20398788 20398922 -65590012 + MER110A LTR ERV1 1 132 -359 2658 184 26 2 chr18 20398922 20399383 -65589551 + MER70A LTR ERVL 1 472 0 1585 225 44 36 chr18 20399383 20399755 -65589179 + MER110A LTR ERV1 132 491 0 3194 209 35 8 chr18 20399758 20400413 -65588521 + MER110-int LTR ERV1 4 676 -3971 845 248 35 0 chr18 20400435 20400637 -65588297 + MER58A DNA MER1_type 1 209 -15 8253 158 31 49 chr18 20400656 20402275 -65586659 + MER110-int LTR ERV1 719 2307 -2340 1820 248 61 45 chr18 20402282 20402859 -65586075 + MLT1E LTR MaLR 8 593 0 2300 204 2 5 chr18 20402859 20403275 -65585659 + MER110-int LTR ERV1 2303 2717 -1930 * 5146 193 41 30 chr18 20403274 20404383 -65584551 + MER110-int LTR ERV1 3492 4612 -35 236 210 81 0 chr18 20404432 20404494 -65584440 + MER110A LTR ERV1 3 69 -399 1093 115 6 12 chr18 20404501 20404666 -65584268 - Tigger7 DNA MER2_type -1 2486 2323 964 231 4 26 chr18 20404685 20404914 -65584020 + MER110-int LTR ERV1 2084 2307 -2340 241 203 0 34 chr18 20404925 20404984 -65583950 + MLT1E LTR MaLR 13 69 -524 444 184 76 8 chr18 20404998 20405125 -65583809 + MER110A LTR ERV1 364 491 0 441 245 187 0 chr18 20406841 20406996 -65581938 + MIR SINE MIR 53 236 -26 186 221 0 117 chr18 20408405 20408482 -65580452 - MIR SINE MIR -80 182 115 937 130 0 92 chr18 20408577 20408761 -65580173 + AluJb SINE Alu 133 299 -13 22 0 0 0 chr18 20409130 20409152 -65579782 + AT_rich Low_complexity Low_complexity 1 22 0 2158 129 0 13 chr18 20409406 20409715 -65579219 - AluSq SINE Alu -6 307 3 468 264 62 79 chr18 20409909 20410136 -65578798 + L2 LINE L2 1424 1646 -1668 183 156 0 0 chr18 20413035 20413067 -65575867 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 291 283 204 7 chr18 20414086 20414238 -65574696 + MIR SINE MIR 65 246 -16 347 235 94 17 chr18 20414416 20414551 -65574383 - MIR SINE MIR -51 157 11 200 320 39 47 chr18 20415168 20415296 -65573638 - MIR SINE MIR -62 146 20 339 326 51 7 chr18 20415371 20415509 -65573425 - L2 LINE L2 -1 3271 3128 1089 81 0 27 chr18 20416190 20416338 -65572596 - L1PB1 LINE L1 0 6151 6008 878 226 0 5 chr18 20416338 20416546 -65572388 + L1P LINE L1 4974 5180 -966 1329 261 66 16 chr18 20416590 20417031 -65571903 + LTR16B LTR ERVL 1 463 -1 802 187 45 7 chr18 20417380 20417535 -65571399 + L1PB4 LINE L1 5992 6152 -4 328 312 32 9 chr18 20418439 20418563 -65570371 - MIR SINE MIR -62 146 16 2476 180 65 11 chr18 20418619 20419097 -65569837 - MLT1D LTR MaLR -1 504 1 1430 139 62 83 chr18 20419330 20419654 -65569280 - L1MA5A LINE L1 0 6297 5981 213 147 31 39 chr18 20420005 20420134 -65568800 + (TTA)n Simple_repeat Simple_repeat 2 129 0 283 232 162 10 chr18 20422105 20422204 -65566730 - L2 LINE L2 0 3313 3200 509 195 32 41 chr18 20422341 20422464 -65566470 + MER103 DNA DNA 2 123 -43 203 311 40 14 chr18 20422641 20422715 -65566219 - MIR3 SINE MIR -130 78 3 2472 158 27 5 chr18 20423742 20424190 -65564744 - Tigger4(Zombi) DNA MER2_type -10 2721 2264 869 176 72 0 chr18 20424188 20424341 -65564593 - Tigger4(Zombi) DNA MER2_type -2563 168 5 * 482 229 25 34 chr18 20424723 20424841 -65564093 - L2 LINE L2 0 3313 3197 4371 91 5 2 chr18 20424949 20425521 -65563413 + L1PA13 LINE L1 5590 6163 0 2244 128 0 6 chr18 20426045 20426358 -65562576 + AluSx SINE Alu 1 311 -1 2528 49 0 13 chr18 20426951 20427255 -65561679 - AluY SINE Alu -11 300 1 821 204 34 23 chr18 20427356 20427532 -65561402 + MER58A DNA MER1_type 26 203 -21 358 274 0 60 chr18 20427605 20427722 -65561212 + MIR SINE MIR 92 201 -61 2107 108 44 0 chr18 20427856 20428151 -65560783 - AluSq SINE Alu -5 308 1 302 91 23 0 chr18 20429358 20429402 -65559532 + L1PA10 LINE L1 5888 5932 -236 24 0 0 0 chr18 20429809 20429833 -65559101 + AT_rich Low_complexity Low_complexity 1 24 0 443 306 96 44 chr18 20430833 20431080 -65557854 + MIR SINE MIR 3 258 -4 2057 128 0 33 chr18 20431584 20431889 -65557045 + AluSx SINE Alu 1 295 -17 2833 3 9 13 chr18 20433354 20433672 -65555262 - AluYb8 SINE Alu -1 317 1 287 311 114 0 chr18 20433850 20433982 -65554952 - MER63C DNA MER1_type -544 386 240 237 185 77 15 chr18 20433951 20434016 -65554918 + MER63C DNA MER1_type 335 403 -527 * 914 317 139 26 chr18 20434395 20435149 -65553785 + L2 LINE L2 1521 2359 -955 821 283 80 31 chr18 20435208 20435732 -65553202 + L2 LINE L2 2719 3313 0 340 286 10 31 chr18 20435948 20436046 -65552888 + L2 LINE L2 3177 3272 0 2115 123 3 3 chr18 20436493 20436793 -65552141 - AluSg SINE Alu -10 300 1 345 316 50 22 chr18 20436970 20437109 -65551825 - MIR SINE MIR -118 144 2 668 261 33 14 chr18 20437876 20438087 -65550847 - MIR SINE MIR -3 259 45 294 196 0 0 chr18 20438473 20438519 -65550415 - MIR3 SINE MIR -21 187 142 * 923 190 63 11 chr18 20438513 20438687 -65550247 + MER5A DNA MER1_type 7 189 0 202 156 0 0 chr18 20438698 20438730 -65550204 + MER5B DNA MER1_type 4 35 -143 18032 35 0 1 chr18 20438732 20441570 -65547364 + L1PA3 LINE L1 3310 6154 -1 34 0 0 0 chr18 20441570 20441604 -65547330 + AT_rich Low_complexity Low_complexity 1 34 0 325 299 165 0 chr18 20441654 20441781 -65547153 - MER5B DNA MER1_type -30 148 1 522 270 145 6 chr18 20441797 20441956 -65546978 + MER5A DNA MER1_type 9 189 0 226 301 32 32 chr18 20441959 20442052 -65546882 - MIR SINE MIR -112 150 58 939 107 107 0 chr18 20443534 20443683 -65545251 + L1PA16 LINE L1 6000 6164 -2 21463 90 6 10 chr18 20443740 20444864 -65544070 + Charlie3 DNA MER1_type 1 1128 -1578 2249 113 0 3 chr18 20444864 20445165 -65543769 - AluSx SINE Alu -12 300 1 21463 90 6 10 chr18 20445165 20446756 -65542178 + Charlie3 DNA MER1_type 1128 2706 0 1898 35 0 13 chr18 20446771 20446998 -65541936 + L1PA2 LINE L1 5932 6155 0 296 250 92 0 chr18 20447117 20447193 -65541741 - MER81 DNA DNA -16 98 16 259 244 219 25 chr18 20448391 20448510 -65540424 + MLT1J LTR MaLR 1 142 -369 961 150 28 28 chr18 20448618 20448798 -65540136 + MER53 DNA DNA 2 181 -8 457 292 64 64 chr18 20448816 20449066 -65539868 + MLT1J LTR MaLR 260 509 -2 21 36 0 0 chr18 20449491 20449519 -65539415 + AT_rich Low_complexity Low_complexity 1 28 0 565 342 12 25 chr18 20449523 20449766 -65539168 - MIR SINE MIR -7 255 16 180 200 0 0 chr18 20449931 20449971 -65538963 + (CA)n Simple_repeat Simple_repeat 1 40 0 189 306 157 28 chr18 20451089 20451197 -65537737 + MIR SINE MIR 30 151 -57 1537 245 116 130 chr18 20451263 20452800 -65536134 - L2 LINE L2 -102 3211 1687 605 214 109 42 chr18 20452817 20453130 -65535804 + L1MC5 LINE L1 7581 7914 -47 2377 207 90 5 chr18 20453185 20453754 -65535180 + L1MDa LINE L1 639 1255 -5285 319 206 8 114 chr18 20454569 20454700 -65534234 - L1MC/D LINE L1 -1996 5812 5696 4902 142 28 1 chr18 20454817 20455601 -65533333 + L1MA8 LINE L1 5485 6289 -2 2085 242 12 37 chr18 20455693 20456209 -65532725 + L1PA13 LINE L1 211 713 -6074 430 89 0 0 chr18 20456206 20456262 -65532672 + L1P LINE L1 4899 4954 -1192 * 1993 194 33 50 chr18 20456257 20456742 -65532192 + L1MCa LINE L1 219 695 -5731 2291 85 3 10 chr18 20457194 20457499 -65531435 - AluSx SINE Alu -9 303 1 1727 137 61 4 chr18 20457761 20458039 -65530895 + AluSx SINE Alu 1 294 -18 299 200 2 5 chr18 20458384 20458465 -65530469 - AluJ/FRAM SINE Alu -36 266 223 24 53 0 0 chr18 20458618 20458656 -65530278 + AT_rich Low_complexity Low_complexity 1 38 0 2318 139 123 5 chr18 20458690 20459072 -65529862 + MSTA LTR MaLR 2 428 0 275 177 5 101 chr18 20459160 20459358 -65529576 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 * 289 187 33 0 chr18 20459332 20459423 -65529511 + (TA)n Simple_repeat Simple_repeat 1 94 0 318 124 34 0 chr18 20459539 20459628 -65529306 + (TA)n Simple_repeat Simple_repeat 2 93 0 207 195 49 0 chr18 20459632 20459714 -65529220 + (TAA)n Simple_repeat Simple_repeat 3 88 0 6788 174 31 17 chr18 20460975 20462499 -65526435 + L1M3f LINE L1 15 1559 -4065 234 0 0 0 chr18 20462499 20462525 -65526409 + (T)n Simple_repeat Simple_repeat 1 26 0 3283 31 0 1 chr18 20462531 20462566 -65526368 + L1P1 LINE L1 5049 5083 -1072 4496 25 2 0 chr18 20462566 20463090 -65525844 - L1PA3 LINE L1 0 6155 5631 3283 31 0 1 chr18 20463090 20463636 -65525298 + L1PA3 LINE L1 5083 5627 -528 * 10877 185 46 25 chr18 20463634 20465782 -65523152 + L1M3f LINE L1 1547 3648 -2680 1493 214 7 14 chr18 20465782 20466077 -65522857 + AluJo SINE Alu 6 298 -14 10877 185 46 25 chr18 20466077 20466215 -65522719 + L1M3f LINE L1 3648 3782 -2546 198 0 0 0 chr18 20466215 20466237 -65522697 + (CAA)n Simple_repeat Simple_repeat 3 24 0 10877 185 46 25 chr18 20466237 20467129 -65521805 + L1M3f LINE L1 3782 4796 -1532 10824 93 14 13 chr18 20467143 20468665 -65520269 + L1P3 LINE L1 3 1525 -4936 235 111 0 22 chr18 20468665 20468710 -65520224 - L1M4 LINE L1 -2233 3913 3870 2611 137 12 2 chr18 20468718 20469150 -65519784 + L1MC/D LINE L1 5254 5689 -644 454 267 83 0 chr18 20470011 20470131 -65518803 + HERVL40 LTR ERVL 2612 2741 -2789 4930 213 19 37 chr18 20470135 20471229 -65517705 + L1M2 LINE L1 3 1065 -5784 1410 118 12 16 chr18 20471229 20471475 -65517459 + L1MA4A LINE L1 6056 6300 -3 4930 213 19 37 chr18 20471475 20471498 -65517436 + L1M2 LINE L1 1065 1087 -5762 5892 287 55 19 chr18 20471498 20473340 -65515594 + HERVL40 LTR ERVL 2756 4664 -866 12800 151 36 100 chr18 20474260 20474525 -65514409 + L1MA8 LINE L1 2169 2449 -3842 186 103 0 0 chr18 20474525 20474554 -65514380 + (TA)n Simple_repeat Simple_repeat 1 29 0 12800 151 36 100 chr18 20474554 20475615 -65513319 + L1MA8 LINE L1 2449 3576 -2715 594 140 11 0 chr18 20475615 20475708 -65513226 + FLAM_C SINE Alu 12 105 -38 12800 151 36 100 chr18 20475708 20475770 -65513164 + L1MA8 LINE L1 3576 3640 -2651 942 214 0 0 chr18 20475770 20475929 -65513005 + FRAM SINE Alu 1 152 -24 12800 151 36 100 chr18 20475929 20476655 -65512279 + L1MA8 LINE L1 3640 4411 -1880 2054 131 7 7 chr18 20476655 20476952 -65511982 + AluSx SINE Alu 1 297 -15 12800 151 36 100 chr18 20476952 20478605 -65510329 + L1MA8 LINE L1 4411 5919 -372 21374 91 10 3 chr18 20479506 20483373 -65505561 + L1PA7 LINE L1 2271 6154 0 3302 65 2 5 chr18 20483376 20483807 -65505127 + L1PA8 LINE L1 5740 6169 -3 376 338 47 28 chr18 20483855 20484068 -65504866 - L3 LINE CR1 -4 1573 1357 361 227 27 0 chr18 20484149 20484224 -65504710 - MER81 DNA DNA 0 114 38 720 295 41 20 chr18 20484232 20484476 -65504458 + MIR SINE MIR 6 254 -8 1680 296 65 56 chr18 20484507 20485256 -65503678 - L3 LINE CR1 -207 1370 615 292 351 52 0 chr18 20485294 20485428 -65503506 - MIR SINE MIR 0 262 122 4300 109 13 5 chr18 20485428 20486063 -65502871 + L1PA13 LINE L1 5524 6163 0 327 359 38 8 chr18 20486084 20486215 -65502719 - MIR SINE MIR -126 136 2 550 287 53 16 chr18 20486615 20486803 -65502131 - L2 LINE L2 -2 3311 3117 265 200 18 0 chr18 20487089 20487144 -65501790 + MSTB1 LTR MaLR 1 56 -376 6195 154 25 5 chr18 20487144 20488283 -65500651 + L1 LINE L1 3326 4487 -1659 778 159 0 16 chr18 20488618 20488744 -65500190 + FLAM_C SINE Alu 1 124 -9 903 38 0 0 chr18 20488752 20488886 -65500048 + AluY SINE Alu 181 314 0 2145 134 3 0 chr18 20489236 20489535 -65499399 - AluSx SINE Alu -12 300 1 28 29 0 0 chr18 20489767 20489802 -65499132 + AT_rich Low_complexity Low_complexity 1 35 0 1630 115 0 0 chr18 20489802 20490054 -65498880 + L1 LINE L1 4477 4728 -1418 2300 155 67 25 chr18 20491161 20491567 -65497367 - LTR36 LTR ERV1 0 611 189 1680 152 3 30 chr18 20491537 20491834 -65497100 - LTR36 LTR ERV1 -322 289 1 * 358 216 72 18 chr18 20492453 20492564 -65496370 - MIR SINE MIR -57 205 89 298 246 25 107 chr18 20492567 20492689 -65496245 - MIR SINE MIR -131 131 20 441 0 0 0 chr18 20492717 20492766 -65496168 + (CA)n Simple_repeat Simple_repeat 2 50 0 1317 275 132 0 chr18 20492904 20493337 -65495597 + L2 LINE L2 1961 2450 -864 2653 199 53 40 chr18 20493337 20494548 -65494386 - L1M4c LINE L1 -3888 2496 1178 892 221 76 38 chr18 20494520 20494887 -65494047 - L1MEc LINE L1 -4175 2388 2008 * 861 126 0 35 chr18 20494898 20495041 -65493893 + FLAM_C SINE Alu 5 142 -1 1107 282 26 22 chr18 20495042 20495542 -65493392 - L1MEc LINE L1 -4574 1822 1321 20239 37 1 0 chr18 20495660 20498904 -65490030 + L1PA5 LINE L1 2898 6141 -13 1269 207 59 8 chr18 20499035 20499481 -65489453 + MLT1E3 LTR MaLR 1 508 -116 3855 173 64 3 chr18 20499542 20500310 -65488624 + L1MB7 LINE L1 5365 6179 -5 587 229 6 12 chr18 20500314 20500480 -65488454 + L1ME LINE L1 841 1005 -5065 1081 248 69 51 chr18 20500482 20500673 -65488261 + L1ME LINE L1 2191 2377 -3703 1511 194 50 7 chr18 20500673 20500956 -65487978 + AluJo SINE Alu 3 297 -15 1081 248 69 51 chr18 20500956 20501256 -65487678 + L1ME LINE L1 2377 2691 -3389 6849 57 15 0 chr18 20501262 20502794 -65486140 + L1PA7 LINE L1 4637 6154 0 286 190 25 0 chr18 20502924 20503003 -65485931 + L1ME LINE L1 2785 2865 -3215 230 219 16 0 chr18 20503109 20503173 -65485761 - L1MD3 LINE L1 -10 7985 7921 2916 210 70 58 chr18 20503191 20503807 -65485127 - L1MD1 LINE L1 -11 6231 5599 1568 123 17 4 chr18 20503807 20504043 -65484891 - AluSg/x SINE Alu 0 310 72 2916 210 70 58 chr18 20504043 20504296 -65484638 - L1MD1 LINE L1 -643 5599 5351 433 188 24 12 chr18 20504297 20504382 -65484552 - MLT1G1 LTR MaLR -504 91 6 398 291 125 6 chr18 20504835 20505219 -65483715 + Charlie7 DNA MER1_type 193 643 -1969 231 88 0 0 chr18 20505260 20505294 -65483640 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 1242 143 73 77 chr18 20505940 20506240 -65482694 - L1MA8 LINE L1 -5 6286 5988 629 296 104 17 chr18 20506377 20506607 -65482327 - MIR SINE MIR -11 251 2 28 79 0 0 chr18 20507390 20507453 -65481481 + AT_rich Low_complexity Low_complexity 1 63 0 1630 188 13 7 chr18 20507510 20507808 -65481126 + AluJb SINE Alu 13 312 0 1495 133 13 144 chr18 20508860 20508968 -65479966 + MLT1B LTR MaLR 4 124 -266 401 190 20 10 chr18 20508968 20509068 -65479866 - U13 snRNA snRNA -2 102 2 1495 133 13 144 chr18 20509068 20509334 -65479600 + MLT1B LTR MaLR 124 329 -61 250 236 137 47 chr18 20510612 20510735 -65478199 + MIR SINE MIR 2 113 -149 2067 124 65 37 chr18 20510735 20511089 -65477845 - THE1B LTR MaLR 0 364 1 250 236 137 47 chr18 20511089 20511107 -65477827 + MIR SINE MIR 113 128 -134 2000 144 18 0 chr18 20511107 20511392 -65477542 + AluSx SINE Alu 1 290 -22 250 236 137 47 chr18 20511392 20511434 -65477500 + MIR SINE MIR 128 262 0 2161 102 0 30 chr18 20511535 20511839 -65477095 + AluSg SINE Alu 1 295 -15 601 181 9 17 chr18 20512234 20512350 -65476584 - AluJo SINE Alu -177 135 21 200 203 14 29 chr18 20512449 20512518 -65476416 + T-rich Low_complexity Low_complexity 6 73 0 21 36 0 0 chr18 20512820 20512848 -65476086 + AT_rich Low_complexity Low_complexity 1 28 0 2111 125 3 0 chr18 20513263 20513560 -65475374 - AluSq SINE Alu -15 298 1 1062 162 11 0 chr18 20513612 20513791 -65475143 - AluJb SINE Alu -11 301 121 2576 204 91 94 chr18 20513791 20514300 -65474634 - L1M4 LINE L1 -885 5261 4752 759 179 238 0 chr18 20514300 20514468 -65474466 - MER63A DNA MER1_type -1 209 2 2576 204 91 94 chr18 20514468 20514622 -65474312 - L1M4 LINE L1 -1394 4752 4599 720 229 0 0 chr18 20514622 20514762 -65474172 - AluJb SINE Alu -39 273 134 2576 204 91 94 chr18 20514762 20516684 -65472250 - L1M4 LINE L1 -1547 4599 2418 393 290 112 25 chr18 20516785 20517061 -65471873 - L1MC/D LINE L1 -1987 6215 5916 517 300 142 40 chr18 20517220 20517473 -65471461 + L3 LINE CR1 1287 1565 -12 436 281 26 0 chr18 20517668 20517782 -65471152 - L2 LINE L2 0 3313 3197 328 231 77 11 chr18 20519042 20519133 -65469801 + MIR3 SINE MIR 106 202 -6 189 286 0 0 chr18 20519229 20519278 -65469656 - L2 LINE L2 -4 3309 3261 369 284 127 0 chr18 20519657 20519791 -65469143 - L2 LINE L2 -2 3311 3161 233 313 86 43 chr18 20520083 20520246 -65468688 - L2 LINE L2 -493 2821 2652 2424 60 10 7 chr18 20520273 20520575 -65468359 - AluY SINE Alu -8 303 1 2069 199 26 46 chr18 20521628 20521811 -65467123 - L1MC/D LINE L1 -940 5600 5415 2359 85 10 3 chr18 20521811 20522118 -65466816 - AluY SINE Alu -2 309 1 2069 199 26 46 chr18 20522118 20522516 -65466418 - L1MC/D LINE L1 -1125 5415 5031 2947 255 100 19 chr18 20522521 20523065 -65465869 - L1MDa LINE L1 -3611 2929 2431 339 25 0 0 chr18 20523065 20523105 -65465829 + (TG)n Simple_repeat Simple_repeat 1 40 0 2947 255 100 19 chr18 20523105 20524261 -65464673 - L1MDa LINE L1 -4109 2431 1086 2213 91 40 7 chr18 20524539 20524836 -65464098 - AluSx SINE Alu 0 312 6 205 238 25 0 chr18 20525074 20525154 -65463780 + GA-rich Low_complexity Low_complexity 5 86 0 2514 66 0 0 chr18 20525630 20525933 -65463001 + AluY SINE Alu 1 303 -8 22 35 0 0 chr18 20525945 20525974 -65462960 + AT_rich Low_complexity Low_complexity 1 29 0 209 217 121 60 chr18 20527559 20527642 -65461292 + L2 LINE L2 3226 3313 0 531 213 106 31 chr18 20528432 20528592 -65460342 - MIR SINE MIR -1 261 90 207 310 40 40 chr18 20528655 20528755 -65460179 + L2 LINE L2 3163 3262 -10 529 146 0 0 chr18 20528763 20528845 -65460089 + AluJ/FLAM SINE Alu 7 88 -224 23 54 0 0 chr18 20529843 20529880 -65459054 + AT_rich Low_complexity Low_complexity 1 37 0 518 249 89 18 chr18 20529887 20530056 -65458878 + L1MC5 LINE L1 7706 7886 -75 5975 152 24 31 chr18 20530317 20530557 -65458377 + L1MA4A LINE L1 4090 4330 -1973 2239 92 3 0 chr18 20530557 20530840 -65458094 + AluSx SINE Alu 1 284 -28 315 0 0 0 chr18 20530840 20530875 -65458059 + (CA)n Simple_repeat Simple_repeat 2 36 0 5975 152 24 31 chr18 20530875 20532805 -65456129 + L1MA4A LINE L1 4328 6302 -1 5970 179 53 21 chr18 20533284 20535533 -65453401 - L1MC1 LINE L1 -8 6325 4007 909 188 20 5 chr18 20535633 20535830 -65453104 - L1MC1 LINE L1 -2097 4049 3850 3975 184 11 15 chr18 20535834 20536550 -65452384 - MER44D DNA MER2_type 0 605 21 435 247 0 0 chr18 20536581 20536678 -65452256 - L1MC1 LINE L1 -2296 3850 3754 639 248 113 55 chr18 20536723 20536961 -65451973 + MLT1E LTR MaLR 1 252 -341 344 172 0 0 chr18 20536968 20537032 -65451902 + L1 LINE L1 4265 4328 -1818 1344 56 6 0 chr18 20537032 20537193 -65451741 + AluSx SINE Alu 1 162 -150 1609 232 21 3 chr18 20537209 20537536 -65451398 + MLT1E LTR MaLR 259 591 -2 3526 224 122 29 chr18 20537840 20539239 -65449695 - L1MC1 LINE L1 -2346 3800 2271 1416 196 4 22 chr18 20539243 20539513 -65449421 - AluJo SINE Alu -1 311 47 5668 78 50 1 chr18 20540283 20541079 -65447855 + L1PA10 LINE L1 5324 6158 -10 2292 86 0 3 chr18 20541093 20541383 -65447551 + AluSg SINE Alu 1 289 -21 510 230 103 8 chr18 20541911 20542037 -65446897 - MER45A DNA AcHobo -1 177 40 340 239 130 0 chr18 20542526 20542618 -65446316 - MIR SINE MIR -3 259 156 465 256 17 8 chr18 20542697 20542814 -65446120 - LTR33 LTR ERVL -35 486 369 788 266 82 47 chr18 20542860 20543031 -65445903 - LTR33 LTR ERVL -256 265 81 955 203 33 0 chr18 20543031 20543213 -65445721 - MER5A DNA MER1_type -1 188 1 788 266 82 47 chr18 20543213 20543297 -65445637 - LTR33 LTR ERVL -440 81 1 1990 108 150 24 chr18 20543798 20544178 -65444756 - MSTA LTR MaLR 0 428 1 2072 131 0 0 chr18 20544669 20544966 -65443968 - AluSx SINE Alu -3 309 13 1975 154 0 3 chr18 20545252 20545545 -65443389 + AluSx SINE Alu 1 292 -20 21 0 0 0 chr18 20545997 20546018 -65442916 + AT_rich Low_complexity Low_complexity 1 21 0 1772 140 61 17 chr18 20546241 20546534 -65442400 - AluJb SINE Alu -6 306 1 326 251 109 34 chr18 20546537 20546590 -65442344 - L1MC4a LINE L1 -1914 5894 5846 3325 141 60 22 chr18 20546590 20547059 -65441875 + MER6A DNA MER2_type 1 498 -367 2612 53 0 0 chr18 20547059 20547363 -65441571 + AluY SINE Alu 1 304 -7 3325 141 60 22 chr18 20547363 20547476 -65441458 + MER6A DNA MER2_type 498 605 0 326 251 109 34 chr18 20547476 20547597 -65441337 - L1MC4a LINE L1 -1962 5846 5707 530 314 0 12 chr18 20547607 20547776 -65441158 - HERV16 LTR ERVL -3575 1421 1255 426 281 0 72 chr18 20547809 20547948 -65440986 + HERV16 LTR ERVL 987 1115 -3881 794 241 46 0 chr18 20548328 20548544 -65440390 + L1MC5 LINE L1 5723 5948 -1860 1453 230 64 108 chr18 20548691 20549441 -65439493 + L1MC5 LINE L1 6874 7542 -419 2042 181 73 35 chr18 20549441 20549922 -65439012 - MLT1D LTR MaLR -4 501 3 1453 230 64 108 chr18 20549922 20550273 -65438661 + L1MC5 LINE L1 7542 7907 -54 2926 199 25 12 chr18 20550457 20551105 -65437829 + L1MC3 LINE L1 6397 7052 -733 666 283 110 35 chr18 20551942 20552260 -65436674 + L2 LINE L2 2967 3308 -5 1693 217 52 19 chr18 20552264 20552488 -65436446 + L1ME1 LINE L1 5724 5939 -227 1573 155 11 26 chr18 20552488 20552752 -65436182 + AluJo SINE Alu 43 302 -10 1693 217 52 19 chr18 20552752 20552951 -65435983 + L1ME1 LINE L1 5939 6161 -5 257 248 109 50 chr18 20555554 20555692 -65433242 + MIR SINE MIR 37 186 -67 21315 71 5 0 chr18 20556315 20559088 -65429846 + L1P LINE L1 11 2798 -3348 33 43 0 0 chr18 20760458 20760505 -65228429 + AT_rich Low_complexity Low_complexity 1 47 0 1934 150 57 35 chr18 20760854 20761221 -65227713 + THE1C LTR MaLR 1 375 0 26 30 0 0 chr18 20761410 20761443 -65227491 + AT_rich Low_complexity Low_complexity 1 33 0 184 289 56 11 chr18 20761443 20761533 -65227401 - L2 LINE L2 -952 2362 2269 2376 177 50 23 chr18 20761633 20761812 -65227122 + L1MA6 LINE L1 5763 5936 -364 2151 103 3 32 chr18 20761812 20762123 -65226811 + AluSg SINE Alu 1 302 -8 2376 177 50 23 chr18 20762123 20762458 -65226476 + L1MA6 LINE L1 5936 6291 -9 1173 258 158 27 chr18 20762715 20763164 -65225770 - L2 LINE L2 0 3313 2806 476 277 149 0 chr18 20764289 20764484 -65224450 + MER110 LTR ERV1 253 476 -15 935 187 0 11 chr18 20764588 20764770 -65224164 + L1 LINE L1 4111 4290 -1856 28 0 0 0 chr18 20765110 20765138 -65223796 + AT_rich Low_complexity Low_complexity 1 28 0 28 29 0 0 chr18 20765365 20765400 -65223534 + AT_rich Low_complexity Low_complexity 1 35 0 2483 74 0 10 chr18 20766401 20766713 -65222221 - AluSg SINE Alu -1 309 1 190 273 253 0 chr18 20766807 20766906 -65222028 - MIR SINE MIR -10 252 129 1201 189 40 5 chr18 20767320 20767542 -65221392 - AluJo SINE Alu -82 230 1 191 339 0 18 chr18 20768907 20768963 -65219971 + MIR SINE MIR 21 75 -133 887 71 0 0 chr18 20769145 20769258 -65219676 - AluY SINE Alu -198 113 1 1856 175 0 13 chr18 20769370 20769506 -65219428 + AluJb SINE Alu 1 137 -175 2391 89 0 7 chr18 20769506 20769809 -65219125 + AluSx SINE Alu 1 301 -11 1856 175 0 13 chr18 20769809 20769981 -65218953 + AluJb SINE Alu 137 305 -7 194 315 125 58 chr18 20770093 20770388 -65218546 + L2 LINE L2 2553 2867 -447 208 396 67 39 chr18 20770430 20770506 -65218428 + L2 LINE L2 2928 3000 -272 3088 136 119 2 chr18 20770506 20770978 -65217956 + MER1A DNA MER1_type 1 527 0 208 396 67 39 chr18 20770978 20771156 -65217778 + L2 LINE L2 3000 3189 -83 2274 118 0 3 chr18 20771239 20771552 -65217382 - AluSx SINE Alu 0 312 1 2236 119 0 0 chr18 20772306 20772600 -65216334 + AluSg SINE Alu 1 294 -16 225 0 0 0 chr18 20772840 20772865 -65216069 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 1708 101 0 4 chr18 20772968 20773196 -65215738 - AluSg/x SINE Alu -3 309 83 537 269 121 0 chr18 20773461 20773643 -65215291 + MLT1J LTR MaLR 308 511 0 295 355 91 30 chr18 20773851 20774147 -65214787 - L2 LINE L2 -562 2752 2439 289 250 143 0 chr18 20774206 20774290 -65214644 - L2 LINE L2 0 3272 3177 693 250 14 68 chr18 20774331 20774384 -65214550 - MIR SINE MIR -49 213 159 2312 104 3 0 chr18 20774384 20774683 -65214251 - AluSx SINE Alu -12 300 1 693 250 14 68 chr18 20774683 20774849 -65214085 - MIR SINE MIR -103 159 6 365 333 43 31 chr18 20774954 20775212 -65213722 - L2 LINE L2 -879 2435 2175 237 361 68 5 chr18 20775239 20775444 -65213490 - L2 LINE L2 -1944 1370 1153 2165 96 0 0 chr18 20775837 20776154 -65212780 - AluY SINE Alu 0 317 1 1693 142 6 116 chr18 20776199 20776543 -65212391 + AluSp SINE Alu 1 306 -7 296 340 58 19 chr18 20776628 20776784 -65212150 + MIR3 SINE MIR 44 205 -3 1583 138 53 3 chr18 20777137 20777420 -65211514 + AluSx SINE Alu 5 301 -11 543 269 12 18 chr18 20777443 20777603 -65211331 - L1M4 LINE L1 -1795 4351 4191 1926 135 22 86 chr18 20777603 20777974 -65210960 - MER7A DNA MER2_type -1 345 1 2083 104 6 41 chr18 20778047 20778386 -65210548 + AluSq SINE Alu 1 313 0 1147 176 15 0 chr18 20778416 20778620 -65210314 - MER2 DNA MER2_type -138 207 1 3871 249 90 38 chr18 20778672 20778862 -65210072 - L1MEc LINE L1 -4406 1990 1811 2246 84 37 7 chr18 20778862 20779161 -65209773 - AluY SINE Alu -3 308 1 3871 249 90 38 chr18 20779161 20779337 -65209597 - L1MEc LINE L1 -4585 1811 1646 1933 129 37 10 chr18 20779337 20779631 -65209303 - AluSx SINE Alu -10 302 1 3871 249 90 38 chr18 20779631 20779817 -65209117 - L1MEc LINE L1 -4750 1646 1471 1950 123 25 4 chr18 20779817 20780127 -65208807 - AluSx SINE Alu 0 316 1 3871 249 90 38 chr18 20780127 20780160 -65208774 - L1MEc LINE L1 -4925 1471 1441 1987 65 0 8 chr18 20780160 20780405 -65208529 - AluY SINE Alu -13 298 56 3871 249 90 38 chr18 20780405 20781263 -65207671 - L1MEc LINE L1 -4955 1441 468 260 206 29 20 chr18 20781264 20781366 -65207568 + CT-rich Low_complexity Low_complexity 1 103 0 1477 181 59 4 chr18 20781367 20781637 -65207297 - AluJo SINE Alu -27 285 1 1476 254 45 33 chr18 20781659 20782085 -65206849 - L1MEc LINE L1 -5929 467 37 573 283 106 21 chr18 20782599 20782936 -65205998 - L1MC4a LINE L1 -365 5756 5508 539 265 23 23 chr18 20783171 20783303 -65205631 - L2 LINE L2 0 3272 3141 726 290 61 37 chr18 20784043 20784150 -65204784 - L1ME3A LINE L1 -1 6169 6066 207 0 0 0 chr18 20784150 20784173 -65204761 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 726 290 61 37 chr18 20784173 20784444 -65204490 - L1ME3A LINE L1 -104 6066 5782 1039 170 0 0 chr18 20784444 20784609 -65204325 - AluJb SINE Alu -16 296 132 2136 129 0 10 chr18 20784996 20785298 -65203636 - AluSx SINE Alu -13 299 1 699 217 0 0 chr18 20785517 20785646 -65203288 + FLAM_C SINE Alu 3 131 -2 355 316 91 70 chr18 20785648 20786217 -65202717 - L2 LINE L2 -9 3263 2629 1068 211 140 47 chr18 20786217 20786403 -65202531 - MLT1F LTR MaLR -237 305 83 2267 114 0 0 chr18 20786403 20786701 -65202233 - AluSg SINE Alu -12 298 1 1068 211 140 47 chr18 20786701 20786793 -65202141 - MLT1F LTR MaLR -459 83 1 239 226 226 14 chr18 20786821 20786967 -65201967 - L2 LINE L2 -1232 2082 1906 2145 89 43 30 chr18 20787189 20787492 -65201442 - AluSx SINE Alu -5 307 1 6316 129 31 42 chr18 20787492 20788260 -65200674 - L1MA8 LINE L1 -238 6053 5279 2096 104 4 4 chr18 20788260 20788561 -65200373 - AluSc SINE Alu 0 301 1 6316 129 31 42 chr18 20788561 20789492 -65199442 - L1MA8 LINE L1 -1012 5279 4363 1606 116 40 20 chr18 20789492 20789512 -65199422 + L1PB2 LINE L1 5894 5912 -239 2221 93 0 32 chr18 20789512 20789824 -65199110 - AluY SINE Alu -9 302 1 1606 116 40 20 chr18 20789824 20790053 -65198881 + L1PB2 LINE L1 5912 6148 -3 6316 129 31 42 chr18 20790053 20790209 -65198725 - L1MA8 LINE L1 -1928 4363 4207 252 260 130 0 chr18 20790252 20790329 -65198605 - MIR SINE MIR -62 146 60 2259 83 14 0 chr18 20790383 20790681 -65198253 + AluSg SINE Alu 1 302 0 1560 129 4 4 chr18 20790681 20790921 -65198013 + L1M2 LINE L1 5278 5517 -774 2798 172 32 24 chr18 20791022 20791256 -65197678 + L1M4 LINE L1 4762 4993 -1191 2303 87 0 7 chr18 20791256 20791555 -65197379 + AluSg SINE Alu 1 297 -13 2798 172 32 24 chr18 20791555 20792324 -65196610 + L1M4 LINE L1 4993 5766 -418 655 157 54 48 chr18 20792370 20792536 -65196398 + L1MB8 LINE L1 5171 5337 -809 2075 147 22 78 chr18 20792584 20792993 -65195941 + L1MB8 LINE L1 5784 6169 -9 229 139 0 0 chr18 20792998 20793034 -65195900 - Alu SINE Alu -7 293 258 2183 120 0 3 chr18 20793036 20793327 -65195607 - AluSx SINE Alu -22 290 1 411 282 163 77 chr18 20793598 20793742 -65195192 + LTR16C LTR ERVL 99 229 -262 1844 150 14 7 chr18 20793742 20794035 -65194899 - AluJo SINE Alu -17 295 1 411 282 163 77 chr18 20794035 20794252 -65194682 + LTR16C LTR ERVL 229 491 0 1378 275 149 17 chr18 20794252 20794385 -65194549 + L1MC4a LINE L1 5301 5415 -2393 2192 111 3 0 chr18 20794385 20794673 -65194261 + AluSg SINE Alu 1 289 -21 1378 275 149 17 chr18 20794673 20795178 -65193756 + L1MC4a LINE L1 5415 6023 -1785 214 235 20 0 chr18 20795230 20795281 -65193653 + (TA)n Simple_repeat Simple_repeat 2 53 0 226 283 0 19 chr18 20795936 20795989 -65192945 + L2 LINE L2 3213 3264 -8 320 318 39 28 chr18 20796138 20796317 -65192617 - L3 LINE CR1 -553 1024 844 2925 210 101 30 chr18 20796326 20797215 -65191719 - L1ME1 LINE L1 -5 6161 5172 2325 89 0 10 chr18 20797215 20797519 -65191415 - AluSg SINE Alu -6 304 4 2925 210 101 30 chr18 20797519 20797784 -65191150 - L1ME1 LINE L1 -994 5172 4927 944 166 24 0 chr18 20797914 20798083 -65190851 - MER2 DNA MER2_type -172 173 1 1919 91 40 54 chr18 20798262 20798560 -65190374 + AluSx SINE Alu 1 294 -18 2015 129 23 7 chr18 20798564 20798866 -65190068 + AluSx SINE Alu 1 307 -5 209 0 97 0 chr18 20798903 20798934 -65190000 + CT-rich Low_complexity Low_complexity 2 35 0 305 265 98 15 chr18 20799757 20799889 -65189045 + L2 LINE L2 2947 3089 -183 199 200 263 38 chr18 20800012 20800092 -65188842 + L2 LINE L2 3142 3239 -33 305 263 0 20 chr18 20800526 20800625 -65188309 - L1ME4a LINE L1 -65 6056 5960 272 276 98 65 chr18 20801728 20801851 -65187083 - MIR SINE MIR -56 206 80 794 162 40 165 chr18 20802559 20802779 -65186155 - L1MC5 LINE L1 -48 7913 7667 2620 54 0 10 chr18 20802779 20803092 -65185842 - AluY SINE Alu -1 310 1 1831 163 7 14 chr18 20803092 20803386 -65185548 - AluJo SINE Alu -20 292 1 794 162 40 165 chr18 20803386 20803467 -65185467 - L1MC5 LINE L1 -292 7669 7649 1697 168 39 11 chr18 20803472 20803757 -65185177 - AluJb SINE Alu -6 306 14 256 224 30 0 chr18 20803757 20803824 -65185110 - L1MC5 LINE L1 -83 7878 7810 1168 223 90 60 chr18 20803846 20804333 -65184601 - L1MC5 LINE L1 -305 7656 7244 816 175 0 0 chr18 20804541 20804661 -65184273 + AluJb SINE Alu 2 121 -191 1837 178 0 0 chr18 20804758 20805051 -65183883 + AluJb SINE Alu 1 293 -19 432 0 0 0 chr18 20805051 20805099 -65183835 + (CA)n Simple_repeat Simple_repeat 2 49 0 1713 178 14 0 chr18 20805130 20805411 -65183523 - AluJb SINE Alu -25 287 3 897 319 130 14 chr18 20805440 20805957 -65182977 + L2 LINE L2 2159 2735 -579 355 348 120 60 chr18 20806123 20806456 -65182478 + L2 LINE L2 2915 3267 -5 342 280 28 19 chr18 20806997 20807104 -65181830 - MIR SINE MIR -5 257 150 471 217 0 0 chr18 20807177 20807283 -65181651 + (CATATA)n Simple_repeat Simple_repeat 1 106 0 2074 124 0 3 chr18 20807286 20807576 -65181358 - AluSx SINE Alu -23 289 1 21 57 0 0 chr18 20807704 20807739 -65181195 + AT_rich Low_complexity Low_complexity 1 35 0 339 236 132 28 chr18 20808613 20808757 -65180177 + L1MC5 LINE L1 7749 7907 -54 2488 90 0 0 chr18 20808762 20809072 -65179862 + AluSx SINE Alu 1 310 -2 27 0 0 0 chr18 20809079 20809106 -65179828 + AT_rich Low_complexity Low_complexity 1 27 0 458 315 67 16 chr18 20809211 20809465 -65179469 + L1M4 LINE L1 4903 5169 -977 3621 211 40 64 chr18 20809465 20809546 -65179388 + L1M4 LINE L1 2283 2364 -3782 2450 87 0 3 chr18 20809546 20809858 -65179076 + AluY SINE Alu 1 311 0 3621 211 40 64 chr18 20809858 20810444 -65178490 + L1M4 LINE L1 2364 2962 -3184 2056 125 0 11 chr18 20810444 20810783 -65178151 + AluSx SINE Alu 1 336 0 3621 211 40 64 chr18 20810783 20810873 -65178061 + L1M4 LINE L1 2962 3053 -3093 2541 64 3 6 chr18 20810873 20811187 -65177747 + AluSp SINE Alu 1 313 0 3621 211 40 64 chr18 20811187 20811532 -65177402 + L1M4 LINE L1 3053 3405 -2741 1934 177 8 37 chr18 20811532 20811934 -65177000 + MLT1B LTR MaLR 1 390 0 3621 211 40 64 chr18 20811934 20812262 -65176672 + L1M4 LINE L1 3405 3685 -2461 999 201 0 0 chr18 20812262 20812426 -65176508 + FRAM SINE Alu 1 164 -2 921 132 6 11 chr18 20812435 20812609 -65176325 + (GGAGA)n Simple_repeat Simple_repeat 2 174 0 433 73 0 0 chr18 20812609 20812664 -65176270 + (GGAA)n Simple_repeat Simple_repeat 1 55 0 263 260 0 0 chr18 20812678 20812751 -65176183 + L1M4 LINE L1 3714 3786 -2360 2314 104 0 3 chr18 20812751 20813058 -65175876 + AluSq SINE Alu 1 306 -7 408 137 0 14 chr18 20813060 20813133 -65175801 + AluSp/q SINE Alu 224 295 -18 2327 201 28 131 chr18 20813134 20813542 -65175392 + L1M4 LINE L1 3779 4227 -1919 2890 13 0 0 chr18 20813542 20813860 -65175074 - AluYb8 SINE Alu 0 318 1 2327 201 28 131 chr18 20813860 20814243 -65174691 + L1M4 LINE L1 4227 4444 -1702 1964 171 0 3 chr18 20814243 20814548 -65174386 - AluJo SINE Alu -8 304 1 2327 201 28 131 chr18 20814548 20814773 -65174161 + L1M4 LINE L1 4444 4691 -1455 2408 88 0 10 chr18 20814995 20815302 -65173632 - AluY SINE Alu -7 304 1 364 314 166 22 chr18 20815717 20815940 -65172994 - MIR SINE MIR -5 257 3 2375 78 7 0 chr18 20816236 20816531 -65172403 - AluSx SINE Alu -15 297 1 356 294 31 69 chr18 20817110 20817270 -65171664 - MER5A DNA MER1_type 0 189 36 2454 67 0 3 chr18 20817433 20817731 -65171203 - AluY SINE Alu -12 299 3 242 308 92 42 chr18 20817758 20817878 -65171056 + MIR SINE MIR 77 203 -5 2512 75 0 0 chr18 20819475 20819783 -65169151 + AluY SINE Alu 1 308 -3 1693 98 0 41 chr18 20820651 20820896 -65168038 - AluSc SINE Alu -16 293 59 1746 195 0 13 chr18 20821438 20821736 -65167198 - AluJo SINE Alu -16 296 3 2336 103 7 0 chr18 20821743 20822043 -65166891 - AluSq SINE Alu -11 302 1 192 40 0 0 chr18 20822326 20822351 -65166583 + (TA)n Simple_repeat Simple_repeat 1 25 0 1850 148 0 0 chr18 20822361 20822631 -65166303 - AluSx SINE Alu -42 270 1 936 129 0 0 chr18 20822898 20823037 -65165897 - FRAM SINE Alu 0 176 38 383 237 45 6 chr18 20823061 20823217 -65165717 - L1M4 LINE L1 -863 5283 5122 1711 158 8 0 chr18 20823244 20823509 -65165425 - AluSx SINE Alu -45 267 1 549 194 37 0 chr18 20823512 20823646 -65165288 - ORSL DNA AcHobo -136 139 1 306 319 82 50 chr18 20824032 20824214 -65164720 - MIR SINE MIR -67 195 8 3775 192 29 22 chr18 20824337 20825070 -65163864 - L1MB7 LINE L1 -13 6171 5444 2358 100 3 0 chr18 20825070 20825371 -65163563 - AluSp SINE Alu -11 302 1 3775 192 29 22 chr18 20825371 20825622 -65163312 - L1MB7 LINE L1 -740 5444 5183 3016 129 23 13 chr18 20825622 20826147 -65162787 - L1MA4 LINE L1 -6 6294 5765 3775 192 29 22 chr18 20826147 20826207 -65162727 - L1MB7 LINE L1 -1001 5183 5125 795 252 87 0 chr18 20826292 20826534 -65162400 + L1ME LINE L1 4822 5084 -1062 2273 111 3 0 chr18 20826710 20827017 -65161917 + AluSx SINE Alu 1 308 -4 494 156 0 0 chr18 20827797 20827887 -65161047 - Alu SINE Alu -3 307 218 966 130 0 27 chr18 20827890 20828036 -65160898 - AluJb SINE Alu -168 144 3 2063 153 0 0 chr18 20828070 20828365 -65160569 - AluSx SINE Alu -17 295 1 196 175 32 0 chr18 20830923 20830986 -65157948 + (TA)n Simple_repeat Simple_repeat 1 65 0 1672 174 48 3 chr18 20831061 20831355 -65157579 + AluJb SINE Alu 1 307 -5 489 158 0 48 chr18 20831361 20831507 -65157427 + GA-rich Low_complexity Low_complexity 1 139 0 384 280 114 46 chr18 20832789 20832964 -65155970 + L1ME LINE L1 5584 5770 -351 465 222 0 30 chr18 20834060 20834159 -65154775 - L2 LINE L2 -4 3268 3173 834 62 0 0 chr18 20834353 20834466 -65154468 + (TCCA)n Simple_repeat Simple_repeat 1 113 0 460 237 0 11 chr18 20834480 20834573 -65154361 - L2 LINE L2 -32 3281 3190 561 325 43 17 chr18 20835468 20835702 -65153232 - MIR SINE MIR -3 259 20 318 283 50 42 chr18 20835941 20836061 -65152873 + L2 LINE L2 3188 3308 -5 1189 75 37 0 chr18 20836169 20836330 -65152604 - AluY SINE Alu -14 297 131 2242 51 6 100 chr18 20836340 20836671 -65152263 - AluY SINE Alu -11 300 1 27 0 0 0 chr18 20837045 20837072 -65151862 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr18 20837434 20837462 -65151472 + AT_rich Low_complexity Low_complexity 1 28 0 2528 89 0 0 chr18 20837539 20837852 -65151082 + AluSq SINE Alu 1 313 0 2139 125 0 0 chr18 20837875 20838164 -65150770 + AluSg SINE Alu 20 308 -2 2191 88 0 39 chr18 20838750 20839057 -65149877 - AluSg SINE Alu -2 308 14 194 327 127 0 chr18 20839355 20839465 -65149469 - L2 LINE L2 0 3313 3190 238 294 0 15 chr18 20839655 20839723 -65149211 + MLT1K LTR MaLR 183 249 -339 320 216 14 0 chr18 20839926 20840000 -65148934 + MLT1K LTR MaLR 510 584 -4 1987 133 7 10 chr18 20840022 20840155 -65148779 + AluSx SINE Alu 1 133 -179 1281 136 185 8 chr18 20840155 20840420 -65148514 + AluJb SINE Alu 1 312 0 1987 133 7 10 chr18 20840420 20840586 -65148348 + AluSx SINE Alu 133 299 -13 1754 169 3 3 chr18 20840812 20841096 -65147838 + AluJb SINE Alu 1 284 -28 38 22 0 0 chr18 20841096 20841141 -65147793 + AT_rich Low_complexity Low_complexity 1 45 0 275 289 72 0 chr18 20841610 20841707 -65147227 - MIR SINE MIR -6 256 153 2180 106 0 0 chr18 20841774 20842085 -65146849 + AluSq SINE Alu 1 311 0 322 363 27 20 chr18 20842226 20842372 -65146562 - MIR3 SINE MIR -48 160 14 6654 117 58 28 chr18 20842395 20843049 -65145885 - Tigger3b DNA MER2_type -1797 1231 525 2413 88 0 0 chr18 20843049 20843355 -65145579 + AluSc SINE Alu 1 306 -3 6654 117 58 28 chr18 20843355 20843896 -65145038 - Tigger3b DNA MER2_type -2503 525 1 3614 152 90 39 chr18 20844543 20845137 -65143797 + L1MC3 LINE L1 6856 7509 -276 1736 52 0 14 chr18 20845137 20845350 -65143584 + AluY SINE Alu 98 307 -4 3614 152 90 39 chr18 20845350 20845625 -65143309 + L1MC3 LINE L1 7509 7769 -16 1444 85 0 11 chr18 20847079 20847267 -65141667 + AluY SINE Alu 1 186 -125 2242 93 3 0 chr18 20847296 20847587 -65141347 + AluSg1 SINE Alu 1 292 -17 27 49 0 0 chr18 20848964 20849005 -65139929 + AT_rich Low_complexity Low_complexity 1 41 0 259 300 58 53 chr18 20849147 20849337 -65139597 + MIR SINE MIR 7 197 -65 2317 87 0 13 chr18 20849870 20850179 -65138755 + AluSg SINE Alu 1 305 -5 2132 109 13 10 chr18 20851102 20851406 -65137528 + AluSg SINE Alu 5 309 -1 2002 123 13 30 chr18 20851518 20851819 -65137115 - AluSx SINE Alu -16 296 1 376 307 148 25 chr18 20851869 20852152 -65136782 - MLT1L LTR MaLR -102 513 196 602 175 119 34 chr18 20852162 20852452 -65136482 + Charlie1b DNA MER1_type 82 475 -2286 2224 73 0 77 chr18 20852452 20852635 -65136299 - AluSg SINE Alu -8 302 153 2334 67 0 0 chr18 20852635 20852920 -65136014 - AluY SINE Alu -25 286 2 2224 73 0 77 chr18 20852920 20853063 -65135871 - AluSg SINE Alu -157 153 1 602 175 119 34 chr18 20853063 20853117 -65135817 + Charlie1b DNA MER1_type 475 523 0 341 336 42 65 chr18 20853118 20853332 -65135602 - MIR SINE MIR -35 227 19 265 275 17 33 chr18 20853413 20853533 -65135401 + MER117 DNA MER1_type 2 119 -78 2224 92 10 0 chr18 20854379 20854673 -65134261 + AluSp SINE Alu 3 299 -14 917 191 0 34 chr18 20854832 20855010 -65133924 + AluJo SINE Alu 121 292 -20 2044 121 47 3 chr18 20855207 20855505 -65133429 + AluSx SINE Alu 1 311 -1 547 183 96 0 chr18 20855858 20855962 -65132972 + AluJo/FLAM SINE Alu 4 117 -195 1330 115 0 0 chr18 20855963 20856145 -65132789 - AluSq SINE Alu -22 291 110 776 121 24 32 chr18 20856176 20856300 -65132634 - AluSx SINE Alu -24 285 163 646 135 0 0 chr18 20856292 20856388 -65132546 - AluSx SINE Alu -216 96 1 * 2063 155 0 0 chr18 20857014 20857310 -65131624 + AluSx SINE Alu 1 296 -16 1934 160 0 7 chr18 20860442 20860748 -65128186 - AluSx SINE Alu -8 304 1 483 225 81 46 chr18 20860771 20860944 -65127990 + MIR SINE MIR 11 189 -73 237 224 0 0 chr18 20861075 20861133 -65127801 + (CA)n Simple_repeat Simple_repeat 2 59 0 188 284 149 0 chr18 20861466 20861533 -65127401 - L2 LINE L2 -46 3226 3150 2301 57 0 11 chr18 20861775 20862056 -65126878 + AluY SINE Alu 1 278 -33 377 379 61 0 chr18 20862261 20862522 -65126412 - L2 LINE L2 -638 2676 2400 511 228 124 0 chr18 20863343 20863488 -65125446 + MLT1J LTR MaLR 342 504 -7 1877 171 7 3 chr18 20863946 20864256 -65124678 - AluJb SINE Alu -1 311 1 2350 86 3 0 chr18 20864956 20865259 -65123675 - AluY SINE Alu -7 304 1 21 0 0 0 chr18 20865575 20865596 -65123338 + AT_rich Low_complexity Low_complexity 1 21 0 1013 140 0 0 chr18 20865718 20865882 -65123052 - L1PB3 LINE L1 -113 6041 5878 370 307 21 14 chr18 20865883 20866023 -65122911 - L1MC/D LINE L1 -2201 5607 5467 681 181 8 23 chr18 20866038 20866171 -65122763 - FAM SINE Alu -22 163 33 569 222 71 4 chr18 20866222 20866463 -65122471 - L1MC/D LINE L1 -720 5446 5191 1690 159 20 27 chr18 20866485 20866786 -65122148 - AluJb SINE Alu -13 299 1 379 322 161 25 chr18 20866886 20867333 -65121601 - L1MC/D LINE L1 -1123 5023 4516 451 178 0 0 chr18 20867419 20867492 -65121442 - MER20 DNA MER1_type -145 74 2 445 247 108 52 chr18 20867508 20867759 -65121175 - L1 LINE L1 -1707 4439 4175 253 344 27 11 chr18 20867822 20868008 -65120926 - L1 LINE L1 -2076 4070 3882 2281 97 0 10 chr18 20868078 20868386 -65120548 - AluSx SINE Alu -7 305 1 188 35 35 0 chr18 20868472 20868501 -65120433 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 2038 104 0 4 chr18 20868509 20868777 -65120157 - AluSx SINE Alu -45 267 1 2405 73 7 10 chr18 20869005 20869307 -65119627 - AluY SINE Alu -10 301 1 21 57 0 0 chr18 20869433 20869468 -65119466 + AT_rich Low_complexity Low_complexity 1 35 0 1335 272 99 16 chr18 20870481 20870974 -65117960 + MLT2E LTR ERVL 1 534 -94 317 272 46 87 chr18 20871539 20871659 -65117275 - MIR SINE MIR -11 251 158 2225 97 27 7 chr18 20871659 20871958 -65116976 - AluSx SINE Alu -6 306 2 317 272 46 87 chr18 20871958 20872087 -65116847 - MIR SINE MIR -104 158 25 1908 147 0 7 chr18 20872184 20872470 -65116464 - AluJb SINE Alu -28 284 1 191 86 0 29 chr18 20872543 20872578 -65116356 + (ATTG)n Simple_repeat Simple_repeat 2 35 0 487 194 136 0 chr18 20872578 20872681 -65116253 - FLAM_A SINE Alu -14 119 3 2238 92 10 7 chr18 20872726 20873029 -65115905 + AluSx SINE Alu 1 304 -8 260 177 16 0 chr18 20873502 20873564 -65115370 + Alu SINE Alu 240 302 0 1232 280 96 5 chr18 20873586 20874173 -65114761 + MER115 DNA AcHobo 32 690 -3 453 275 57 0 chr18 20874186 20874379 -65114555 - L1ME LINE L1 -319 5802 5599 1933 159 0 7 chr18 20874398 20874688 -65114246 + AluJb SINE Alu 1 288 -24 189 0 0 0 chr18 20874691 20874712 -65114222 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 975 229 13 26 chr18 20874921 20875148 -65113786 + MER58A DNA MER1_type 1 224 0 294 208 0 97 chr18 20875298 20875370 -65113564 - L2 LINE L2 -2 3311 3247 579 301 59 5 chr18 20876237 20876440 -65112494 + MIR SINE MIR 49 262 0 53 0 0 0 chr18 20876589 20876642 -65112292 + AT_rich Low_complexity Low_complexity 1 53 0 5401 104 50 18 chr18 20876652 20876937 -65111997 + L1PA13 LINE L1 5161 5435 -728 2237 99 0 0 chr18 20876937 20877270 -65111664 + AluSc SINE Alu 1 333 0 5401 104 50 18 chr18 20877270 20877963 -65110971 + L1PA13 LINE L1 5435 6161 -2 251 77 0 0 chr18 20878033 20878072 -65110862 + MADE1 DNA Mariner 15 53 -27 1442 191 48 9 chr18 20879096 20879411 -65109523 + Charlie1b DNA MER1_type 1 327 -196 431 143 0 0 chr18 20879416 20879479 -65109455 - AluJ/FLAM SINE Alu -227 85 23 629 186 180 0 chr18 20879629 20879801 -65109133 - MER3 DNA MER1_type -1 208 6 845 102 38 102 chr18 20879816 20880002 -65108932 - MER20 DNA MER1_type -1 218 45 192 315 76 0 chr18 20881582 20881674 -65107260 + L2 LINE L2 3205 3303 -10 823 264 111 43 chr18 20881707 20882195 -65106739 - LTR33 LTR ERVL 0 521 1 1519 286 99 25 chr18 20883544 20884424 -65104510 - L2 LINE L2 0 3313 2367 651 280 18 62 chr18 20884422 20884516 -65104418 - L2 LINE L2 -136 3177 3080 * 2244 96 10 0 chr18 20884516 20884807 -65104127 + AluSc SINE Alu 1 294 -15 651 280 18 62 chr18 20884807 20884987 -65103947 - L2 LINE L2 -233 3080 2915 374 276 122 32 chr18 20885006 20885162 -65103772 + L2 LINE L2 2396 2565 -749 * 401 271 10 0 chr18 20885159 20885255 -65103679 - L2 LINE L2 -962 2352 2256 279 0 0 0 chr18 20885536 20885567 -65103367 + (TAA)n Simple_repeat Simple_repeat 2 32 0 803 129 97 0 chr18 20886645 20886769 -65102165 + AluSq/x SINE Alu 1 136 -177 2168 99 0 0 chr18 20886769 20887072 -65101862 + AluY SINE Alu 1 303 0 929 146 73 13 chr18 20887072 20887464 -65101470 + LTR54B LTR ERV1 14 496 -2 210 71 0 0 chr18 20889734 20889762 -65099172 + (GAAA)n Simple_repeat Simple_repeat 1 28 0 24 0 0 0 chr18 20889853 20889877 -65099057 + AT_rich Low_complexity Low_complexity 1 24 0 2386 86 0 3 chr18 20889988 20890290 -65098644 - AluSx SINE Alu -11 301 1 1620 161 0 4 chr18 20890351 20890593 -65098341 - AluJb SINE Alu -30 282 42 245 282 0 0 chr18 20890973 20891044 -65097890 + GA-rich Low_complexity Low_complexity 2 72 0 217 344 0 0 chr18 20891065 20891126 -65097808 - L2 LINE L2 -213 3059 2999 532 240 162 7 chr18 20892076 20892230 -65096704 - MER5A DNA MER1_type 0 189 12 437 277 21 0 chr18 20892247 20892341 -65096593 + MER5B DNA MER1_type 1 96 -82 2160 130 0 0 chr18 20892341 20892642 -65096292 + AluSx SINE Alu 11 311 -1 4293 121 33 6 chr18 20892711 20893383 -65095551 - L1PA16 LINE L1 -9 6157 5468 288 136 0 0 chr18 20893390 20893434 -65095500 + MER5B DNA MER1_type 126 169 -9 402 270 58 7 chr18 20894386 20894523 -65094411 + MIR SINE MIR 10 153 -109 209 75 19 75 chr18 20894638 20894691 -65094243 + (TTATA)n Simple_repeat Simple_repeat 3 52 0 998 164 19 47 chr18 20895015 20895210 -65093724 - MER3 DNA MER1_type 0 209 19 1974 153 0 7 chr18 20895210 20895510 -65093424 + AluSx SINE Alu 7 304 -8 998 164 19 47 chr18 20895510 20895528 -65093406 - MER3 DNA MER1_type -190 19 2 297 206 176 0 chr18 20896074 20896176 -65092758 + LTR65 LTR ERV1 44 163 -506 * 535 312 58 10 chr18 20896157 20896452 -65092482 + MER90 LTR ERV1 288 596 -18 1790 179 31 0 chr18 20896578 20896929 -65092005 + L1MB7 LINE L1 5804 6165 -19 193 311 153 54 chr18 20897776 20898162 -65090772 - L2 LINE L2 -42 3230 2807 2267 109 0 7 chr18 20898440 20898743 -65090191 - AluSx SINE Alu -9 303 3 1439 146 67 41 chr18 20899750 20900018 -65088916 - AluJo SINE Alu -37 275 1 2353 93 7 0 chr18 20900250 20900550 -65088384 + AluSq SINE Alu 1 302 -11 2201 87 7 32 chr18 20901183 20901492 -65087442 + AluSq SINE Alu 1 301 -12 1089 189 133 53 chr18 20902339 20902603 -65086331 + AluJo SINE Alu 1 285 -17 400 279 10 0 chr18 20902604 20902708 -65086226 + MIR SINE MIR 145 249 -13 731 161 102 16 chr18 20903090 20903320 -65085614 + MER5C DNA MER1_type 1 324 0 4468 159 27 65 chr18 20903943 20905123 -65083811 + L1MB7 LINE L1 5047 6180 -4 263 300 42 47 chr18 20906193 20906383 -65082551 + L1ME LINE L1 5636 5824 -297 931 101 0 0 chr18 20906388 20906507 -65082427 + AluSg SINE Alu 1 119 -191 996 201 97 3 chr18 20906608 20906907 -65082027 + L1M4 LINE L1 4957 5283 -863 1864 164 17 0 chr18 20907250 20907537 -65081397 + AluJb SINE Alu 3 294 -18 420 316 85 37 chr18 20907659 20908013 -65080921 + L1MEc LINE L1 2112 2482 -3914 2241 90 0 7 chr18 20908318 20908617 -65080317 + AluSq SINE Alu 17 313 0 1708 169 15 0 chr18 20908765 20909038 -65079896 + AluSx SINE Alu 1 277 -35 249 33 0 0 chr18 20909045 20909075 -65079859 + (TAAAA)n Simple_repeat Simple_repeat 4 33 0 2998 145 19 52 chr18 20909130 20909682 -65079252 - L1MB3 LINE L1 -344 5839 5311 2247 118 0 7 chr18 20909682 20909987 -65078947 - AluSx SINE Alu -9 303 1 2998 145 19 52 chr18 20909987 20910229 -65078705 - L1MB3 LINE L1 -872 5311 5063 25 31 0 0 chr18 20910291 20910323 -65078611 + AT_rich Low_complexity Low_complexity 1 32 0 519 60 0 0 chr18 20910438 20910505 -65078429 + (TCCA)n Simple_repeat Simple_repeat 1 67 0 1277 142 13 11 chr18 20911157 20911421 -65077513 + AluJo SINE Alu 3 314 0 913 264 100 38 chr18 20911672 20912141 -65076793 + LTR33A LTR ERVL 2 499 -24 457 191 9 126 chr18 20912156 20912261 -65076673 + MER112 DNA MER1_type 64 133 -127 1711 161 4 11 chr18 20912261 20912540 -65076394 - AluJb SINE Alu -22 290 14 457 191 9 126 chr18 20912540 20912649 -65076285 + MER112 DNA MER1_type 133 253 -7 543 153 10 10 chr18 20912891 20912989 -65075945 - Tigger7 DNA MER2_type -1 2586 2489 283 149 21 0 chr18 20912987 20913034 -65075900 - Tigger7 DNA MER2_type -284 266 219 * 7218 88 20 156 chr18 20913040 20913219 -65075715 + Tigger1 DNA MER2_type 2 204 -2214 2301 84 0 26 chr18 20913219 20913527 -65075407 - AluSg SINE Alu -10 300 1 7218 88 20 156 chr18 20913527 20913832 -65075102 + Tigger1 DNA MER2_type 204 549 -1869 2394 104 0 0 chr18 20913832 20914140 -65074794 - AluSg SINE Alu -2 308 1 7218 88 20 156 chr18 20914140 20914269 -65074665 + Tigger1 DNA MER2_type 549 694 -1724 2411 96 0 10 chr18 20914269 20914582 -65074352 - AluSx SINE Alu -2 310 1 7218 88 20 156 chr18 20914582 20914982 -65073952 + Tigger1 DNA MER2_type 694 1147 -1271 914 135 23 0 chr18 20914982 20915115 -65073819 - AluJo SINE Alu -176 136 1 7218 88 20 156 chr18 20915115 20915320 -65073614 + Tigger1 DNA MER2_type 1147 1378 -1040 1485 151 0 0 chr18 20915320 20915538 -65073396 + AluSg/x SINE Alu 83 300 -10 7218 88 20 156 chr18 20915538 20915692 -65073242 + Tigger1 DNA MER2_type 1378 1551 -867 2249 105 3 0 chr18 20915692 20915987 -65072947 + AluSq SINE Alu 1 296 -17 7218 88 20 156 chr18 20915987 20916074 -65072860 + Tigger1 DNA MER2_type 1551 1379 -1039 2084 100 4 7 chr18 20916074 20916353 -65072581 + AluSp SINE Alu 22 299 -14 7218 88 20 156 chr18 20916353 20916376 -65072558 + Tigger1 DNA MER2_type 1378 1402 -1016 2323 96 3 13 chr18 20916682 20916996 -65071938 - AluSx SINE Alu -1 311 1 1591 226 36 17 chr18 20916998 20917573 -65071361 - L1M4 LINE L1 -1389 4757 4172 384 261 34 8 chr18 20917569 20917688 -65071246 - L1MEc LINE L1 -3335 3205 3084 * 518 326 32 9 chr18 20917679 20918019 -65070915 - L1MEc LINE L1 -4824 1897 1550 1717 169 28 14 chr18 20918046 20918402 -65070532 + THE1C LTR MaLR 15 375 0 238 242 42 11 chr18 20918416 20918511 -65070423 - L1MEc LINE L1 -5039 1501 1404 770 299 129 22 chr18 20918516 20918928 -65070006 + LTR16B LTR ERVL 1 456 -8 743 333 36 36 chr18 20918971 20919162 -65069772 + HERV16 LTR ERVL 40 230 -4766 2050 134 7 0 chr18 20919162 20919461 -65069473 + AluSx SINE Alu 1 301 -11 743 333 36 36 chr18 20919461 20919798 -65069136 + HERV16 LTR ERVL 229 568 -4428 539 285 84 57 chr18 20919989 20920316 -65068618 + LTR16B LTR ERVL 8 414 -50 3040 63 17 35 chr18 20920322 20920563 -65068371 + L1PB2 LINE L1 5381 5612 -539 2050 130 3 32 chr18 20920563 20920871 -65068063 + AluSx SINE Alu 1 299 -13 3040 63 17 35 chr18 20920871 20921089 -65067845 + L1PB2 LINE L1 5612 5832 -319 2053 109 46 3 chr18 20921211 20921494 -65067440 - AluSq SINE Alu -18 295 1 354 311 10 6 chr18 20921564 20921711 -65067223 - MIR SINE MIR -68 140 3 1211 134 0 0 chr18 20921757 20921929 -65067005 + FRAM SINE Alu 1 169 -7 593 284 57 48 chr18 20922237 20922466 -65066468 - MIR SINE MIR -13 249 19 2315 203 38 84 chr18 20922663 20923123 -65065811 + L1ME LINE L1 4519 4999 -1167 2170 147 0 0 chr18 20923123 20923435 -65065499 + AluSx SINE Alu 1 312 0 2315 203 38 84 chr18 20923435 20923765 -65065169 + L1ME LINE L1 4999 5343 -823 2087 153 0 6 chr18 20923765 20924079 -65064855 + AluJo SINE Alu 1 312 0 2315 203 38 84 chr18 20924079 20924418 -65064516 + L1ME LINE L1 5343 5598 -568 2397 61 0 3 chr18 20924418 20924714 -65064220 + AluY SINE Alu 2 296 -15 2315 203 38 84 chr18 20924714 20924814 -65064120 + L1ME LINE L1 5598 5701 -465 996 118 0 7 chr18 20924914 20925049 -65063885 - AluSq/x SINE Alu -179 134 1 2346 80 3 7 chr18 20925058 20925359 -65063575 - AluSp SINE Alu -11 302 3 279 247 43 11 chr18 20925463 20925556 -65063378 - L1M4 LINE L1 -714 5460 5365 2227 117 0 0 chr18 20925674 20925972 -65062962 - AluSg SINE Alu -12 298 1 740 196 0 23 chr18 20926470 20926603 -65062331 - FLAM_C SINE Alu -3 130 1 21 36 0 0 chr18 20926646 20926674 -65062260 + AT_rich Low_complexity Low_complexity 1 28 0 203 167 0 21 chr18 20926742 20926790 -65062144 + GA-rich Low_complexity Low_complexity 4 50 0 204 229 146 21 chr18 20927208 20927304 -65061630 - MER5B DNA MER1_type -51 127 20 321 237 145 89 chr18 20927487 20927760 -65061174 + L2 LINE L2 2923 3220 -93 2214 105 7 20 chr18 20927760 20928064 -65060870 - AluSq SINE Alu -13 300 1 321 237 145 89 chr18 20928064 20928127 -65060807 + L2 LINE L2 3220 3278 -35 495 252 43 0 chr18 20928206 20928321 -65060613 - MER5A DNA MER1_type -39 150 31 534 273 60 51 chr18 20928580 20928719 -65060215 - L1ME LINE L1 -376 5745 5609 1186 191 0 0 chr18 20928719 20928928 -65060006 + MER3 DNA MER1_type 1 209 0 534 273 60 51 chr18 20928928 20929140 -65059794 - L1ME LINE L1 -512 5609 5391 446 234 109 75 chr18 20929266 20929505 -65059429 + MER102b DNA MER1_type 94 340 -1 335 260 71 45 chr18 20929672 20929826 -65059108 + MER5A DNA MER1_type 21 178 -11 250 226 62 105 chr18 20929918 20930090 -65058844 - MIR SINE MIR -56 206 42 947 176 0 28 chr18 20930644 20930826 -65058108 + FRAM SINE Alu 1 175 -1 1931 162 0 0 chr18 20930917 20931207 -65057727 - AluSx SINE Alu -22 290 1 2128 102 3 3 chr18 20932260 20932567 -65056367 - AluSx SINE Alu 0 307 1 747 301 105 19 chr18 20933218 20933636 -65055298 - LTR16B LTR ERVL 0 464 11 2041 125 28 3 chr18 20933891 20934179 -65054755 + AluSq SINE Alu 1 295 -18 880 147 0 0 chr18 20934554 20934683 -65054251 + AluSg/x SINE Alu 176 304 -8 2191 112 0 22 chr18 20935421 20935735 -65053199 - AluSx SINE Alu -3 309 3 242 241 0 0 chr18 20939329 20939383 -65049551 + T-rich Low_complexity Low_complexity 1 54 0 23 33 0 0 chr18 20941221 20941251 -65047683 + AT_rich Low_complexity Low_complexity 1 30 0 206 167 0 48 chr18 20941552 20941594 -65047340 + C-rich Low_complexity Low_complexity 5 44 0 26 30 0 0 chr18 20944887 20944920 -65044014 + AT_rich Low_complexity Low_complexity 1 33 0 1746 91 0 9 chr18 20945038 20945268 -65043666 + AluSg/x SINE Alu 85 312 0 406 299 49 37 chr18 20945849 20946013 -65042921 - MIR3 SINE MIR -12 196 31 1079 170 14 33 chr18 20946032 20946087 -65042847 - MER3 DNA MER1_type -1 208 153 1686 167 7 30 chr18 20946087 20946386 -65042548 + AluSx SINE Alu 2 293 -19 1079 170 14 33 chr18 20946386 20946542 -65042392 - MER3 DNA MER1_type -56 153 1 24 32 0 0 chr18 20946754 20946785 -65042149 + AT_rich Low_complexity Low_complexity 1 31 0 2308 85 10 0 chr18 20946795 20947090 -65041844 + AluY SINE Alu 1 298 -13 564 257 133 44 chr18 20947105 20947331 -65041603 - MIR SINE MIR -7 255 10 2147 127 3 3 chr18 20947430 20947738 -65041196 - AluSx SINE Alu -4 308 1 854 97 0 0 chr18 20947879 20947993 -65040941 + AluSq SINE Alu 130 243 -70 822 95 58 7 chr18 20948003 20948037 -65040897 - MER30 DNA MER1_type -86 144 113 195 42 0 0 chr18 20948037 20948061 -65040873 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 822 95 58 7 chr18 20948061 20948163 -65040771 - MER30 DNA MER1_type -117 113 1 273 319 35 12 chr18 20948173 20948342 -65040592 - L1MC4 LINE L1 -546 7496 7324 341 178 52 155 chr18 20948369 20948457 -65040477 - L1MC5 LINE L1 -741 7220 7165 2077 121 14 3 chr18 20948457 20948746 -65040188 - AluSq SINE Alu -21 292 1 341 178 52 155 chr18 20948746 20948870 -65040064 - L1MC5 LINE L1 -796 7165 7030 624 303 32 35 chr18 20949058 20949115 -65039819 - L1MC4a LINE L1 -915 6893 6837 2003 150 0 7 chr18 20949115 20949415 -65039519 - AluJb SINE Alu -14 298 1 624 303 32 35 chr18 20949415 20949641 -65039293 - L1MC4a LINE L1 -971 6837 6611 21 57 0 0 chr18 20949824 20949859 -65039075 + AT_rich Low_complexity Low_complexity 1 35 0 1159 156 6 0 chr18 20949956 20950136 -65038798 - FRAM SINE Alu -4 172 1 2396 84 3 3 chr18 20950164 20950473 -65038461 - AluSg SINE Alu -1 309 1 480 285 56 0 chr18 20950762 20950906 -65038028 + MIR SINE MIR 11 162 -100 339 85 0 0 chr18 20950981 20951028 -65037906 + (CCA)n Simple_repeat Simple_repeat 3 49 0 1989 79 4 26 chr18 20951231 20951497 -65037437 - AluSq SINE Alu -17 296 37 1776 125 14 3 chr18 20951604 20951893 -65037041 + L1PB2 LINE L1 5858 6149 -2 232 295 16 0 chr18 20951894 20951955 -65036979 + LTR16B LTR ERVL 403 464 0 564 185 13 20 chr18 20951955 20952106 -65036828 - L1ME LINE L1 -5124 946 797 367 161 23 46 chr18 20952385 20952472 -65036462 + L1MD3 LINE L1 7866 7950 -45 374 365 30 13 chr18 20952709 20952939 -65035995 + L2 LINE L2 2154 2387 -927 1102 159 0 0 chr18 20953182 20953352 -65035582 - FRAM SINE Alu 0 176 7 22 0 0 0 chr18 20954347 20954369 -65034565 + AT_rich Low_complexity Low_complexity 1 22 0 424 302 33 28 chr18 20954404 20954586 -65034348 + L2 LINE L2 2357 2539 -775 2473 85 0 0 chr18 20954590 20954897 -65034037 + AluSg SINE Alu 1 307 -3 276 91 0 0 chr18 20954897 20954941 -65033993 + (TA)n Simple_repeat Simple_repeat 1 44 0 356 246 105 0 chr18 20954950 20955064 -65033870 + L2 LINE L2 2533 2658 -656 195 42 0 0 chr18 20955817 20955841 -65033093 + (T)n Simple_repeat Simple_repeat 1 24 0 659 268 34 33 chr18 20956204 20956442 -65032492 - MIR SINE MIR -12 250 16 2228 74 0 14 chr18 20957135 20957442 -65031492 - AluSc SINE Alu 0 303 1 1680 34 34 15 chr18 20958048 20958252 -65030682 - L1PA5 LINE L1 -1 6153 5946 2356 94 0 3 chr18 20958493 20958801 -65030133 - AluSx SINE Alu -4 308 2 28 29 0 0 chr18 20958810 20958845 -65030089 + AT_rich Low_complexity Low_complexity 1 35 0 678 300 163 22 chr18 20959259 20959622 -65029312 - MLT1K LTR MaLR -161 427 14 681 172 0 47 chr18 20959867 20959995 -65028939 + FLAM_C SINE Alu 6 127 -16 1714 155 0 56 chr18 20960248 20960394 -65028540 + AluJo SINE Alu 1 122 -190 2254 81 3 0 chr18 20960394 20960700 -65028234 + AluSp SINE Alu 1 307 0 1714 155 0 56 chr18 20960700 20960875 -65028059 + AluJo SINE Alu 122 305 -7 2023 97 52 7 chr18 20961165 20961454 -65027480 + AluSx SINE Alu 1 302 -10 2233 110 0 10 chr18 20961801 20962101 -65026833 + AluSx SINE Alu 1 297 -15 876 155 8 0 chr18 20963279 20963408 -65025526 + FLAM_C SINE Alu 1 130 -3 186 43 0 0 chr18 20963463 20963486 -65025448 + (TATAA)n Simple_repeat Simple_repeat 2 24 0 339 324 248 15 chr18 20963680 20963942 -65024992 - L2 LINE L2 -32 3240 2918 261 0 0 0 chr18 20964101 20964130 -65024804 + (CA)n Simple_repeat Simple_repeat 2 30 0 204 250 0 0 chr18 20964130 20964178 -65024756 + (TA)n Simple_repeat Simple_repeat 1 48 0 252 0 0 0 chr18 20964204 20964232 -65024702 + (TG)n Simple_repeat Simple_repeat 2 29 0 1783 145 37 0 chr18 20964234 20964503 -65024431 - AluSg SINE Alu -31 279 1 620 154 74 20 chr18 20964509 20964658 -65024276 - L1MB8 LINE L1 -69 6109 5953 278 378 31 31 chr18 20965338 20965465 -65023469 - L2 LINE L2 -7 3265 3139 408 274 9 0 chr18 20965556 20965669 -65023265 - L1MB8 LINE L1 -1 6177 6064 289 208 125 0 chr18 20965727 20965799 -65023135 - MER96 DNA MER1_type? -90 85 5 1900 163 3 7 chr18 20965880 20966187 -65022747 + AluJb SINE Alu 1 306 -6 2732 148 9 19 chr18 20967572 20968004 -65020930 - MSTA LTR MaLR 0 428 1 1653 177 7 17 chr18 20968316 20968610 -65020324 - AluJo SINE Alu -21 291 1 501 289 52 0 chr18 20968693 20968866 -65020068 - L1MB7 LINE L1 0 6184 6003 2307 252 148 28 chr18 20969103 20970024 -65018910 + HAL1 LINE L1 4 1034 -1473 3472 157 26 44 chr18 20970033 20970719 -65018215 + L1MC2 LINE L1 5645 6318 -26 956 147 27 0 chr18 20970800 20970950 -65017984 + FAM SINE Alu 10 163 -22 415 294 165 26 chr18 20971020 20971360 -65017574 + L1ME4a LINE L1 5524 5910 -211 2305 88 0 0 chr18 20972168 20972503 -65016431 - AluSq SINE Alu 0 335 1 254 298 75 0 chr18 20972718 20972812 -65016122 - L2 LINE L2 -47 3225 3125 472 317 158 24 chr18 20972874 20973331 -65015603 - L2 LINE L2 -938 2376 1859 2505 66 10 0 chr18 20973373 20973676 -65015258 + AluY SINE Alu 1 306 -5 282 198 44 0 chr18 20973754 20973845 -65015089 + CT-rich Low_complexity Low_complexity 3 97 0 274 307 51 101 chr18 20974001 20974317 -65014617 - L2 LINE L2 -1897 1417 1118 572 283 29 0 chr18 20974718 20974856 -65014078 - MER58A DNA MER1_type 0 142 1 1405 101 6 0 chr18 20974964 20975143 -65013791 - AluSg/x SINE Alu -46 266 87 274 185 0 31 chr18 20975163 20975228 -65013706 + Alu SINE Alu 240 302 0 1390 181 0 4 chr18 20975335 20975561 -65013373 + MLT1A1 LTR MaLR 141 365 0 24 0 0 0 chr18 20976097 20976121 -65012813 + AT_rich Low_complexity Low_complexity 1 24 0 2314 102 0 3 chr18 20976315 20976618 -65012316 - AluSx SINE Alu -10 302 1 32 0 0 0 chr18 20976632 20976664 -65012270 + AT_rich Low_complexity Low_complexity 1 32 0 292 240 100 10 chr18 20977145 20977245 -65011689 + MLT1J2 LTR MaLR 1 109 -341 286 237 263 0 chr18 20977351 20977469 -65011465 + MLT1I LTR MaLR 253 401 -8 500 255 156 61 chr18 20977564 20977795 -65011139 + MLT1L LTR MaLR 41 293 -322 1792 175 7 16 chr18 20977889 20978198 -65010736 - AluJo SINE Alu -6 306 1 24 0 0 0 chr18 20978308 20978332 -65010602 + AT_rich Low_complexity Low_complexity 1 24 0 627 293 96 13 chr18 20978498 20978727 -65010207 + MIR SINE MIR 2 249 -13 194 295 83 62 chr18 20979150 20979343 -65009591 + L2 LINE L2 2842 3038 -234 3171 232 26 27 chr18 20980620 20980717 -65008217 + L1MC1 LINE L1 4561 4657 -1504 2170 121 0 0 chr18 20980717 20981015 -65007919 + AluSx SINE Alu 1 298 -14 3171 232 26 27 chr18 20981015 20981758 -65007176 + L1MC1 LINE L1 4657 5397 -764 398 167 35 35 chr18 20981768 20981912 -65007022 + CT-rich Low_complexity Low_complexity 2 145 0 1525 177 6 93 chr18 20981918 20982251 -65006683 - AluJb SINE Alu -8 304 1 4078 136 11 7 chr18 20982251 20982870 -65006064 + L1MC1 LINE L1 5703 6324 -9 5017 256 76 34 chr18 20983294 20983377 -65005557 + HAL1 LINE L1 2 80 -2427 2219 94 0 10 chr18 20983377 20983674 -65005260 - AluSc SINE Alu -15 294 1 5017 256 76 34 chr18 20983674 20984481 -65004453 + HAL1 LINE L1 80 852 -1655 2166 138 38 30 chr18 20984481 20984851 -65004083 - THE1C LTR MaLR -2 373 1 5017 256 76 34 chr18 20984851 20985618 -65003316 + HAL1 LINE L1 852 1739 -768 2314 75 7 13 chr18 20985618 20985925 -65003009 + AluY SINE Alu 1 305 -6 5017 256 76 34 chr18 20985925 20986021 -65002913 + HAL1 LINE L1 1739 1830 -677 240 35 0 0 chr18 20986160 20986189 -65002745 + (CA)n Simple_repeat Simple_repeat 2 30 0 1659 171 3 35 chr18 20986370 20986685 -65002249 + AluJb SINE Alu 5 309 -3 801 133 62 0 chr18 20987965 20988078 -65000856 + FLAM_C SINE Alu 1 120 -13 2415 64 7 0 chr18 20988421 20988718 -65000216 - AluY SINE Alu -12 299 1 201 233 0 0 chr18 20988760 20988803 -65000131 + CT-rich Low_complexity Low_complexity 4 46 0 347 283 66 9 chr18 20989037 20989143 -64999791 + L2 LINE L2 3201 3312 -1 2597 176 46 53 chr18 20989500 20989942 -64998992 + MLT2B1 LTR ERVL 1 445 -75 2106 123 0 0 chr18 20989942 20990244 -64998690 + AluSx SINE Alu 1 302 -10 2337 98 0 7 chr18 20990248 20990545 -64998389 + AluSg SINE Alu 1 295 -15 2597 176 46 53 chr18 20990545 20990621 -64998313 + MLT2B1 LTR ERVL 448 520 0 227 309 137 51 chr18 20990812 20990987 -64997947 - L2 LINE L2 -177 3095 2906 1624 342 33 69 chr18 20990993 20991351 -64997583 + L1MEc LINE L1 361 730 -5991 2105 128 10 0 chr18 20991351 20991648 -64997286 + AluSx SINE Alu 5 304 -8 2318 107 3 0 chr18 20991648 20991957 -64996977 + AluSg SINE Alu 1 310 0 1624 342 33 69 chr18 20991957 20992023 -64996911 + L1MEc LINE L1 729 796 -5925 1870 100 0 0 chr18 20992023 20992262 -64996672 + AluSg/x SINE Alu 67 305 -7 1624 342 33 69 chr18 20992262 20992505 -64996429 + L1MEc LINE L1 796 1006 -5715 1276 210 24 4 chr18 20992510 20992762 -64996172 - MLT1E1 LTR MaLR 0 654 398 2256 102 3 10 chr18 20992765 20993070 -64995864 - AluSx SINE Alu -9 303 1 584 251 17 17 chr18 20993137 20993316 -64995618 + L1MEc LINE L1 2189 2367 -4173 6991 179 18 195 chr18 20993324 20995314 -64993620 + L1M2 LINE L1 5 2347 -4502 575 128 81 0 chr18 20995314 20995400 -64993534 + AluJ/FLAM SINE Alu 1 93 -219 6991 179 18 195 chr18 20995400 20995560 -64993374 + L1M2 LINE L1 2347 1617 -5232 2025 138 10 0 chr18 20995560 20995856 -64993078 + AluSx SINE Alu 5 303 -9 6991 179 18 195 chr18 20995856 20996501 -64992433 + L1M2 LINE L1 1616 2374 -4475 2075 107 13 10 chr18 20996610 20996741 -64992193 + AluSq SINE Alu 1 130 -183 2419 103 0 0 chr18 20996741 20997053 -64991881 + AluSq SINE Alu 1 312 -1 2075 107 13 10 chr18 20997053 20997220 -64991714 + AluSq SINE Alu 130 300 -13 5031 116 39 88 chr18 20997221 20997542 -64991392 + Tigger1 DNA MER2_type 1472 1807 -611 2278 101 0 0 chr18 20997542 20997850 -64991084 + AluSc SINE Alu 1 308 -1 5031 116 39 88 chr18 20997850 20997969 -64990965 + Tigger1 DNA MER2_type 1807 1930 -488 1902 149 3 0 chr18 20997969 20998264 -64990670 + AluSx SINE Alu 8 303 -9 5031 116 39 88 chr18 20998264 20998454 -64990480 + Tigger1 DNA MER2_type 1930 2128 -290 2416 92 0 10 chr18 20998454 20998768 -64990166 + AluSx SINE Alu 1 311 -1 5031 116 39 88 chr18 20998768 20999019 -64989915 + Tigger1 DNA MER2_type 2128 2304 -114 2024 112 11 0 chr18 20999019 20999340 -64989594 + AluSg SINE Alu 1 324 0 5031 116 39 88 chr18 20999340 20999450 -64989484 + Tigger1 DNA MER2_type 2304 2418 0 1353 181 5 0 chr18 20999450 20999664 -64989270 - Tigger7 DNA MER2_type -517 216 2 1751 154 35 49 chr18 20999880 20999988 -64988946 + MLT2C1 LTR ERVL 1 109 -288 2137 98 0 14 chr18 20999988 21000298 -64988636 + AluSq SINE Alu 1 306 0 1751 154 35 49 chr18 21000298 21000532 -64988402 + MLT2C1 LTR ERVL 109 339 -58 192 152 0 0 chr18 21000556 21000589 -64988345 + (TG)n Simple_repeat Simple_repeat 1 33 0 1812 145 44 3 chr18 21000610 21000906 -64988028 + AluJo SINE Alu 5 312 0 328 254 130 24 chr18 21000906 21001075 -64987859 - L1M4 LINE L1 -917 5229 5043 811 199 31 12 chr18 21001088 21001249 -64987685 - AluJb SINE Alu -19 293 130 2404 83 0 10 chr18 21001316 21001617 -64987317 + AluY SINE Alu 1 298 -13 688 248 20 25 chr18 21001674 21001859 -64987075 + L2 LINE L2 3117 3302 -11 561 115 0 0 chr18 21001859 21001946 -64986988 + (TGGA)n Simple_repeat Simple_repeat 1 87 0 688 248 20 25 chr18 21001946 21001958 -64986976 + L2 LINE L2 3302 3313 0 247 291 120 43 chr18 21002012 21002129 -64986805 + L2 LINE L2 3146 3271 -1 381 305 17 0 chr18 21002350 21002468 -64986466 - MIR SINE MIR -71 191 72 2450 89 0 9 chr18 21002745 21003061 -64985873 + AluSp SINE Alu 1 313 0 1540 202 3 0 chr18 21003107 21003389 -64985545 + AluJb SINE Alu 16 298 -14 345 254 34 8 chr18 21003609 21003727 -64985207 + L1ME4a LINE L1 5966 6086 -35 1385 331 3 62 chr18 21004818 21005141 -64983793 - AluSq SINE Alu -9 304 1 2225 129 0 0 chr18 21005326 21005637 -64983297 - AluSx SINE Alu -1 311 1 1918 140 3 7 chr18 21005637 21005923 -64983011 - AluJb SINE Alu -17 295 11 248 352 23 31 chr18 21006930 21007058 -64981876 - L2 LINE L2 -8 3305 3179 446 298 46 112 chr18 21007541 21007638 -64981296 - L2 LINE L2 -23 3249 3147 2480 73 0 0 chr18 21007638 21007938 -64980996 + AluSx SINE Alu 1 300 -12 446 298 46 112 chr18 21007938 21008145 -64980789 - L2 LINE L2 -125 3147 2965 24 32 0 0 chr18 21008213 21008244 -64980690 + AT_rich Low_complexity Low_complexity 1 31 0 186 286 0 20 chr18 21008502 21008551 -64980383 + MIR SINE MIR 2 49 -213 485 125 0 0 chr18 21008552 21008616 -64980318 - FLAM_A SINE Alu -59 83 20 182 188 31 0 chr18 21008630 21008662 -64980272 + MIR SINE MIR 35 67 -195 599 232 0 26 chr18 21008663 21008814 -64980120 + L1M4 LINE L1 2614 2760 -3386 323 328 118 15 chr18 21010215 21010410 -64978524 - MIR SINE MIR -47 215 1 2099 84 7 25 chr18 21010499 21010827 -64978107 + AluY SINE Alu 1 323 0 342 348 85 14 chr18 21011954 21012095 -64976839 - MIR3 SINE MIR -9 199 49 373 302 152 62 chr18 21013781 21014497 -64974437 + L1M2 LINE L1 383 1393 -5456 21 0 0 0 chr18 21015672 21015693 -64973241 + AT_rich Low_complexity Low_complexity 1 21 0 297 0 0 0 chr18 21015915 21015948 -64972986 + (TG)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr18 21015948 21015969 -64972965 + GC_rich Low_complexity Low_complexity 1 21 0 243 240 94 73 chr18 21016407 21016503 -64972431 - L2 LINE L2 -1 3312 3215 2041 114 10 7 chr18 21016587 21016884 -64972050 + AluSq SINE Alu 1 298 -15 348 94 0 0 chr18 21017041 21017094 -64971840 + AluSc SINE Alu 246 298 -1 297 0 0 0 chr18 21017119 21017152 -64971782 + (T)n Simple_repeat Simple_repeat 1 33 0 895 144 19 12 chr18 21017541 21017701 -64971233 - BC200 scRNA scRNA -39 161 1 2373 68 3 3 chr18 21017945 21018241 -64970693 + AluY SINE Alu 1 296 -15 270 292 106 35 chr18 21018839 21018952 -64969982 - L2 LINE L2 -10 3262 3142 2290 86 38 0 chr18 21018992 21019284 -64969650 + AluSx SINE Alu 1 303 -9 1599 157 0 0 chr18 21019286 21019552 -64969382 + AluSg SINE Alu 45 310 0 551 303 96 0 chr18 21019596 21019804 -64969130 - L3 LINE CR1 -5 1572 1345 351 278 104 29 chr18 21020040 21020213 -64968721 - L3 LINE CR1 -259 1318 1133 27 62 0 0 chr18 21024573 21024621 -64964313 + AT_rich Low_complexity Low_complexity 1 48 0 397 178 67 11 chr18 21028049 21028139 -64960795 - L2 LINE L2 -6 3307 3213 600 265 37 37 chr18 21028418 21028607 -64960327 + MIR SINE MIR 3 191 -71 22 56 0 0 chr18 21028635 21028671 -64960263 + AT_rich Low_complexity Low_complexity 1 36 0 1228 72 0 13 chr18 21029206 21029358 -64959576 + AluY SINE Alu 1 150 -161 2234 101 3 0 chr18 21029448 21029734 -64959200 - AluSx SINE Alu -9 303 17 199 253 89 25 chr18 21030795 21030874 -64958060 - MER5A DNA MER1_type -105 84 1 502 234 73 7 chr18 21030911 21031048 -64957886 + MER3 DNA MER1_type 1 146 -63 588 300 141 23 chr18 21031253 21031693 -64957241 + MLT1L LTR MaLR 1 492 -123 2220 104 10 10 chr18 21031991 21032298 -64956636 + AluSx SINE Alu 1 307 -5 1291 188 0 5 chr18 21032308 21032531 -64956403 + AluJo SINE Alu 87 308 -4 2231 111 7 0 chr18 21032813 21033110 -64955824 + AluSx SINE Alu 5 303 -9 565 111 33 0 chr18 21033345 21033435 -64955499 + L1MA4A LINE L1 2369 2461 -4388 425 105 0 0 chr18 21033435 21033492 -64955442 + AluJ/FLAM SINE Alu 1 57 -255 12062 153 47 29 chr18 21033493 21035213 -64953721 + L1MA4A LINE L1 3287 4976 -2029 2284 108 0 0 chr18 21035213 21035519 -64953415 - AluSx SINE Alu -6 306 1 12062 153 47 29 chr18 21035519 21036675 -64952259 + L1MA4A LINE L1 4976 6255 -750 2282 96 0 0 chr18 21036675 21036968 -64951966 - AluSg SINE Alu -17 293 1 12062 153 47 29 chr18 21036968 21037721 -64951213 + L1MA4A LINE L1 6255 6993 -12 532 162 98 12 chr18 21037758 21037931 -64951003 + L1MC1 LINE L1 2384 2571 -3969 * 2377 168 27 76 chr18 21037929 21038192 -64950742 + L1MC1 LINE L1 5129 5403 -1324 2232 75 7 10 chr18 21038192 21038486 -64950448 + AluY SINE Alu 2 294 -17 2377 168 27 76 chr18 21038486 21038850 -64950084 + L1MC1 LINE L1 5403 5783 -944 1904 136 0 11 chr18 21038850 21039136 -64949798 + AluJb SINE Alu 5 287 -25 2377 168 27 76 chr18 21039136 21039629 -64949305 + L1MC1 LINE L1 5783 6299 -428 2259 76 36 7 chr18 21039629 21039932 -64949002 + AluSx SINE Alu 1 312 0 1571 199 39 0 chr18 21039935 21040217 -64948717 + AluJb SINE Alu 1 293 -19 2377 168 27 76 chr18 21040217 21040263 -64948671 + L1MC1 LINE L1 6301 6348 -379 2313 94 3 0 chr18 21040263 21040561 -64948373 + AluSp SINE Alu 1 299 -14 2377 168 27 76 chr18 21040561 21041041 -64947893 + L1MC1 LINE L1 6348 6689 -38 2146 95 0 11 chr18 21041041 21041355 -64947579 + AluSg SINE Alu 1 311 0 2377 168 27 76 chr18 21041355 21041392 -64947542 + L1MC1 LINE L1 6689 6726 -1 319 208 88 24 chr18 21041428 21041553 -64947381 + HAL1 LINE L1 1364 1496 -1011 554 143 0 67 chr18 21041553 21041658 -64947276 + AluS SINE Alu 1 98 -214 * 695 90 0 0 chr18 21041655 21041744 -64947190 + AluSp/q SINE Alu 203 291 -22 724 210 6 18 chr18 21041744 21041911 -64947023 + HAL1 LINE L1 1488 1652 -855 542 259 183 14 chr18 21041959 21042249 -64946685 + HAL1 LINE L1 1839 2177 -330 254 228 35 0 chr18 21042258 21042315 -64946619 - LTR16B LTR ERVL 0 464 406 647 293 57 19 chr18 21042442 21042654 -64946280 - LTR16B LTR ERVL -240 224 5 311 299 13 0 chr18 21042675 21042752 -64946182 + HAL1 LINE L1 2430 2507 0 878 203 6 0 chr18 21042759 21042922 -64946012 + FAM SINE Alu 4 167 -8 318 278 110 66 chr18 21043416 21043461 -64945473 + MIR SINE MIR 25 67 -195 2825 6 0 6 chr18 21043461 21043774 -64945160 + AluY SINE Alu 1 311 0 318 278 110 66 chr18 21043774 21043955 -64944979 + MIR SINE MIR 67 261 -1 412 185 0 0 chr18 21044445 21044510 -64944424 - AluJ/FLAM SINE Alu -245 67 3 22 35 0 0 chr18 21044523 21044552 -64944382 + AT_rich Low_complexity Low_complexity 1 29 0 1768 132 4 4 chr18 21044638 21044888 -64944046 - AluSx SINE Alu -60 252 3 309 174 54 76 chr18 21044983 21045075 -64943859 - L1MC4 LINE L1 -1339 6703 6614 442 113 47 0 chr18 21045077 21045183 -64943751 + (TA)n Simple_repeat Simple_repeat 1 111 0 325 194 32 54 chr18 21045183 21045276 -64943658 - L1MC4 LINE L1 -1338 6704 6614 307 73 36 0 chr18 21045278 21045333 -64943601 + (TA)n Simple_repeat Simple_repeat 1 57 0 216 250 101 54 chr18 21045742 21045890 -64943044 - MIR SINE MIR -1 261 107 833 167 83 0 chr18 21046061 21046217 -64942717 + AluJb SINE Alu 132 300 -12 3594 115 9 72 chr18 21046871 21047066 -64941868 - Tigger4(Zombi) DNA MER2_type -1 2730 2524 2007 133 0 3 chr18 21047066 21047379 -64941555 - AluSx SINE Alu 0 312 1 3594 115 9 72 chr18 21047379 21047879 -64941055 - Tigger4(Zombi) DNA MER2_type -207 2524 2078 960 153 19 0 chr18 21047871 21048028 -64940906 - Tigger4(Zombi) DNA MER2_type -2571 160 1 * 1146 259 30 10 chr18 21048029 21048431 -64940503 + L1M4 LINE L1 2374 2783 -3363 927 169 108 0 chr18 21048424 21048637 -64940297 + L1MB4 LINE L1 5930 6165 -15 * 4126 223 62 95 chr18 21048667 21050119 -64938815 + L1M4 LINE L1 2775 4273 -1873 8449 93 17 92 chr18 21050119 21051613 -64937321 + SVA Other Other 6 1386 0 4126 223 62 95 chr18 21051613 21051901 -64937033 + L1M4 LINE L1 4273 4569 -1577 2289 88 3 0 chr18 21051901 21052212 -64936722 + AluSp SINE Alu 1 312 0 4126 223 62 95 chr18 21052212 21052379 -64936555 + L1M4 LINE L1 4569 4740 -1406 888 184 30 6 chr18 21052379 21052547 -64936387 + FAM SINE Alu 1 172 -3 4126 223 62 95 chr18 21052547 21052882 -64936052 + L1M4 LINE L1 4740 4946 -1200 269 231 11 11 chr18 21052898 21052989 -64935945 - L1MEc LINE L1 -3316 2764 2674 * 728 256 35 24 chr18 21052984 21053427 -64935507 - L1MEc LINE L1 -3652 2428 1922 709 209 6 79 chr18 21053427 21053604 -64935330 - MER20 DNA MER1_type 0 219 56 263 296 54 15 chr18 21053619 21053822 -64935112 - L1MEc LINE L1 -4184 1896 1686 1984 120 33 7 chr18 21053858 21054159 -64934775 + AluSc SINE Alu 1 309 0 2346 242 67 31 chr18 21054180 21054971 -64933963 - L1MEc LINE L1 -4397 1683 847 1707 161 35 18 chr18 21054971 21055256 -64933678 - AluJb SINE Alu -22 290 1 2346 242 67 31 chr18 21055256 21055461 -64933473 - L1MEc LINE L1 -5233 847 651 1142 77 7 0 chr18 21055476 21055619 -64933315 + AluY SINE Alu 1 144 -167 4715 128 104 29 chr18 21055621 21057062 -64931872 + pTR5 LTR ERV1 745 2438 0 1074 102 13 0 chr18 21057068 21057225 -64931709 + AluY SINE Alu 144 302 -9 368 297 38 65 chr18 21057234 21057524 -64931410 - L1MEc LINE L1 -5408 662 381 * 434 296 79 81 chr18 21057504 21058000 -64930934 - L1MEc LINE L1 -5573 497 3 1638 199 0 17 chr18 21058032 21058334 -64930600 + AluJb SINE Alu 1 297 -15 1800 158 16 50 chr18 21059543 21059866 -64929068 - AluJb SINE Alu 0 312 1 1864 146 3 40 chr18 21060436 21060761 -64928173 - AluSx SINE Alu 0 314 1 2467 164 5 5 chr18 21061001 21061445 -64927489 + L1MB3 LINE L1 5738 6181 -2 994 216 34 41 chr18 21061450 21061635 -64927299 + L1ME3 LINE L1 5860 6044 -118 2329 68 0 3 chr18 21061635 21061928 -64927006 + AluY SINE Alu 1 292 -19 994 216 34 41 chr18 21061928 21062033 -64926901 + L1ME3 LINE L1 6044 6148 -14 228 141 47 31 chr18 21062039 21062103 -64926831 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 2322 90 3 3 chr18 21062151 21062452 -64926482 + AluSc SINE Alu 1 301 -8 1484 182 0 56 chr18 21062560 21062829 -64926105 + AluJo SINE Alu 37 290 -22 257 324 81 20 chr18 21063063 21063359 -64925575 + HAL1b LINE L1 148 461 -887 1217 135 0 91 chr18 21063931 21064161 -64924773 + AluJo SINE Alu 1 209 -103 918 151 151 11 chr18 21064161 21064340 -64924594 + AluJo SINE Alu 84 287 -25 2042 136 17 10 chr18 21065110 21065412 -64923522 - AluSx SINE Alu -8 304 1 793 213 81 69 chr18 21065536 21065734 -64923200 - MER113 DNA MER1_type? -44 477 283 1800 163 7 7 chr18 21065734 21066034 -64922900 - AluJb SINE Alu -12 300 1 793 213 81 69 chr18 21066034 21066257 -64922677 - MER113 DNA MER1_type? -238 283 51 301 277 142 0 chr18 21066524 21066679 -64922255 + MER104 DNA MER2_type 4 180 0 1939 164 0 3 chr18 21066930 21067222 -64921712 + AluJo SINE Alu 1 291 -21 29 47 0 0 chr18 21067266 21067309 -64921625 + AT_rich Low_complexity Low_complexity 1 43 0 333 349 135 31 chr18 21067354 21067681 -64921253 + L1ME4a LINE L1 4632 4992 -1154 21 0 0 0 chr18 21067682 21067703 -64921231 + AT_rich Low_complexity Low_complexity 1 21 0 2269 70 7 7 chr18 21067787 21068089 -64920845 - AluSx SINE Alu -10 302 1 500 111 49 0 chr18 21068132 21068213 -64920721 + U6 snRNA snRNA 2 86 -21 24 0 0 0 chr18 21068260 21068284 -64920650 + AT_rich Low_complexity Low_complexity 1 24 0 341 274 65 39 chr18 21068330 21068483 -64920451 + L1ME4a LINE L1 5282 5438 -683 2158 122 6 3 chr18 21068537 21068848 -64920086 + AluSx SINE Alu 1 312 0 249 261 0 0 chr18 21069809 21069878 -64919056 + L1ME4a LINE L1 5754 5822 -299 479 237 46 7 chr18 21069968 21070120 -64918814 + L1ME4a LINE L1 5964 6121 0 413 224 86 47 chr18 21071986 21072462 -64916472 - MLT1F LTR MaLR -13 582 1 1819 149 40 20 chr18 21072775 21073077 -64915857 - AluJo SINE Alu -4 308 1 1917 154 14 3 chr18 21073366 21073658 -64915276 - AluJb SINE Alu -13 299 5 280 247 330 31 chr18 21073843 21074037 -64914897 + MIR SINE MIR 7 258 -4 549 122 0 0 chr18 21074190 21074280 -64914654 - AluS SINE Alu 0 311 222 1617 75 0 53 chr18 21074380 21074432 -64914502 + AluSq SINE Alu 84 137 -176 2078 111 27 0 chr18 21074432 21074730 -64914204 + AluSp SINE Alu 1 306 -7 1617 75 0 53 chr18 21074730 21074905 -64914029 + AluSq SINE Alu 137 299 -14 2201 113 0 3 chr18 21080424 21080726 -64908208 - AluSx SINE Alu -11 301 1 1959 139 24 3 chr18 21081254 21081584 -64907350 + MER46B DNA MER2_type 25 236 0 195 263 0 0 chr18 21081614 21081652 -64907282 - L3 LINE CR1 -90 1487 1450 773 179 106 0 chr18 21082047 21082198 -64906736 + AluSg/x SINE Alu 137 303 -9 399 272 123 40 chr18 21082587 21082815 -64906119 + L2 LINE L2 2135 2381 -933 392 316 111 16 chr18 21083230 21083420 -64905514 + MIR SINE MIR 34 241 -21 2004 77 4 0 chr18 21083921 21084181 -64904753 - AluY SINE Alu -50 261 1 479 333 83 11 chr18 21084578 21084758 -64904176 + MIR3 SINE MIR 6 198 -10 1626 153 77 7 chr18 21084759 21085046 -64903888 + AluJo SINE Alu 1 307 -5 1787 144 49 11 chr18 21085619 21085903 -64903031 - AluJb SINE Alu -17 295 1 415 287 26 9 chr18 21085965 21086080 -64902854 - L2 LINE L2 0 3313 3197 275 309 118 15 chr18 21086239 21086375 -64902559 + MER5A DNA MER1_type 35 184 -5 831 239 59 70 chr18 21086429 21087026 -64901908 - L1MC5 LINE L1 -49 7912 7323 347 216 25 93 chr18 21087183 21087422 -64901512 - L1MC4 LINE L1 -741 7220 7027 379 298 6 38 chr18 21087473 21087631 -64901303 - LTR33 LTR ERVL -40 481 329 601 199 38 148 chr18 21087909 21088200 -64900734 - L1MC4 LINE L1 -990 6999 6713 2130 120 7 3 chr18 21088446 21088745 -64900189 - AluSx SINE Alu -12 300 1 1701 190 0 3 chr18 21088747 21089036 -64899898 - AluJo SINE Alu -24 288 1 210 192 0 0 chr18 21089180 21089232 -64899702 + (TA)n Simple_repeat Simple_repeat 2 53 0 1193 198 166 86 chr18 21089272 21089822 -64899112 - L1MC4 LINE L1 -1961 5847 5254 627 303 76 63 chr18 21089928 21090363 -64898571 - L1MC4 LINE L1 -1002 5144 4700 444 270 58 7 chr18 21090415 21090552 -64898382 + MIR SINE MIR 48 191 -71 494 300 67 29 chr18 21090575 21090785 -64898149 + MIR SINE MIR 24 241 -21 485 219 27 75 chr18 21090874 21091020 -64897914 + MIR SINE MIR 59 197 -65 261 163 20 0 chr18 21091936 21091985 -64896949 - MLT1K LTR MaLR 0 588 539 2333 98 0 3 chr18 21091997 21092294 -64896640 + AluSx SINE Alu 1 296 -16 914 170 0 0 chr18 21092328 21092493 -64896441 - L1MA3 LINE L1 0 6305 6141 5695 115 46 34 chr18 21092508 21093426 -64895508 - L1MA2 LINE L1 0 6304 5399 2434 81 0 10 chr18 21093426 21093733 -64895201 - AluSp SINE Alu -9 304 1 1712 133 39 39 chr18 21093736 21094015 -64894919 - AluJb SINE Alu -17 295 17 5695 115 46 34 chr18 21094015 21094191 -64894743 - L1MA2 LINE L1 -906 5398 5180 2221 113 0 10 chr18 21094526 21094826 -64894108 - AluY SINE Alu -14 297 1 326 323 32 32 chr18 21094922 21095080 -64893854 + MIR SINE MIR 40 197 -65 24 32 0 0 chr18 21095788 21095819 -64893115 + AT_rich Low_complexity Low_complexity 1 31 0 1774 151 18 11 chr18 21095893 21096178 -64892756 - AluJb SINE Alu -5 307 21 1848 151 65 59 chr18 21096401 21096496 -64892438 - Tigger2 DNA MER2_type 0 2718 2625 1842 144 3 32 chr18 21096496 21096809 -64892125 - AluSx SINE Alu -8 304 1 1848 151 65 59 chr18 21096809 21096890 -64892044 - Tigger2 DNA MER2_type -93 2625 2546 2253 98 0 0 chr18 21096890 21097175 -64891759 - AluSg SINE Alu -25 285 1 1848 151 65 59 chr18 21097175 21097440 -64891494 - Tigger2 DNA MER2_type -172 2546 2273 406 145 0 0 chr18 21097440 21097502 -64891432 - Tigger2 DNA MER2_type -2656 62 1 455 286 9 0 chr18 21097654 21097759 -64891175 + L2 LINE L2 3196 3301 -12 1329 208 4 0 chr18 21098069 21098300 -64890634 - AluJo SINE Alu -64 248 17 2258 153 71 36 chr18 21098300 21098593 -64890341 + Charlie1 DNA MER1_type 2068 2349 -412 2346 113 3 24 chr18 21098593 21098964 -64889970 + MER47A DNA MER2_type 4 366 0 2258 153 71 36 chr18 21098964 21099138 -64889796 + Charlie1 DNA MER1_type 2349 2557 -204 2036 108 3 49 chr18 21099138 21099445 -64889489 + AluSx SINE Alu 1 293 -19 2258 153 71 36 chr18 21099445 21099499 -64889435 + Charlie1 DNA MER1_type 2557 2608 -153 1199 171 38 121 chr18 21099502 21099900 -64889034 - MLT1A1 LTR MaLR 0 365 1 2723 222 75 20 chr18 21099915 21099968 -64888966 - L1MDa LINE L1 -3057 3483 3434 1746 164 0 38 chr18 21099968 21100286 -64888648 - AluJo SINE Alu -6 306 1 2723 222 75 20 chr18 21100286 21101766 -64887168 - L1MDa LINE L1 -3106 3434 1869 684 195 22 74 chr18 21101773 21102004 -64886930 - L1MDa LINE L1 -4859 1681 1463 2475 77 0 0 chr18 21102086 21102386 -64886548 + AluSx SINE Alu 1 300 -12 425 312 8 0 chr18 21102666 21102795 -64886139 - MIR SINE MIR -58 150 48 8202 236 42 38 chr18 21103112 21103140 -64885794 - L1MB4 LINE L1 -12 6666 6640 628 197 86 0 chr18 21103140 21103257 -64885677 - FLAM_A SINE Alu -4 129 3 8202 236 42 38 chr18 21103257 21104567 -64884367 - L1MB4 LINE L1 -38 6640 5337 2223 142 24 64 chr18 21104567 21105019 -64883915 - Tigger2a DNA MER2_type 0 434 1 8202 236 42 38 chr18 21105019 21105533 -64883401 - L1MB4 LINE L1 -1341 5337 4827 180 0 0 0 chr18 21105533 21105553 -64883381 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 8202 236 42 38 chr18 21105553 21106255 -64882679 - L1MB4 LINE L1 -1851 4827 4130 1441 191 46 20 chr18 21106255 21106558 -64882376 + AluJb SINE Alu 1 311 -1 8202 236 42 38 chr18 21106558 21108031 -64880903 - L1MB4 LINE L1 -2548 4130 2641 975 226 59 41 chr18 21108033 21108373 -64880561 - L1MB4 LINE L1 -5317 1329 984 417 183 24 12 chr18 21108375 21108457 -64880477 - LTR9B LTR ERV1 0 644 562 9097 169 44 5 chr18 21108460 21110017 -64878917 + HUERS-P3 LTR ERV1 1467 3084 -5835 518 59 226 29 chr18 21110017 21110119 -64878815 - LTR9B LTR ERV1 -522 122 1 243 0 0 0 chr18 21110125 21110152 -64878782 + (TC)n Simple_repeat Simple_repeat 2 28 0 * 300 70 0 0 chr18 21110151 21110194 -64878740 + (TG)n Simple_repeat Simple_repeat 2 44 0 2008 140 0 0 chr18 21110194 21110479 -64878455 - AluSx SINE Alu -27 285 1 529 300 55 52 chr18 21110527 21110894 -64878040 - L1MB4 LINE L1 -5587 955 588 2889 6 0 0 chr18 21111253 21111564 -64877370 + AluYb8 SINE Alu 1 311 -7 327 277 112 48 chr18 21111584 21111790 -64877144 - L1MB4 LINE L1 -6319 223 5 312 27 0 0 chr18 21111820 21111857 -64877077 + (TG)n Simple_repeat Simple_repeat 2 38 0 579 146 0 0 chr18 21111858 21111947 -64876987 + AluSq/x SINE Alu 47 135 -178 377 151 21 97 chr18 21111980 21112008 -64876926 - L1MB3 LINE L1 -23 6160 6131 2216 110 0 0 chr18 21112008 21112300 -64876634 - AluSx SINE Alu -16 296 5 377 151 21 97 chr18 21112300 21112364 -64876570 - L1MB3 LINE L1 -52 6131 6075 236 343 169 30 chr18 21112453 21112545 -64876389 + L2 LINE L2 1986 2064 -1250 2212 100 10 3 chr18 21112545 21112854 -64876080 - AluSx SINE Alu -1 311 1 236 343 169 30 chr18 21112854 21113559 -64875375 + L2 LINE L2 2064 2894 -420 262 299 0 10 chr18 21113964 21114061 -64874873 - L2 LINE L2 -307 2965 2870 1840 160 0 17 chr18 21114362 21114655 -64874279 - AluJo SINE Alu -24 288 1 1584 146 40 15 chr18 21115433 21115707 -64873227 - AluSx SINE Alu 0 312 32 1989 113 38 10 chr18 21116273 21116564 -64872370 - AluSx SINE Alu -13 299 1 496 178 68 25 chr18 21117412 21117530 -64871404 - MIR SINE MIR -47 215 93 1831 154 23 3 chr18 21117876 21118181 -64870753 + AluJb SINE Alu 1 311 -1 25 83 0 0 chr18 21119449 21119509 -64869425 + AT_rich Low_complexity Low_complexity 1 60 0 22 0 0 0 chr18 21119952 21119974 -64868960 + AT_rich Low_complexity Low_complexity 1 22 0 3394 229 72 24 chr18 21120038 21121087 -64867847 + L1M4 LINE L1 3788 4886 -1260 1052 197 30 0 chr18 21121103 21121367 -64867567 + L1M4 LINE L1 4970 5241 -905 * 3032 221 56 15 chr18 21121356 21121666 -64867268 + L1ME1 LINE L1 4872 5168 -998 2170 116 3 3 chr18 21121666 21121969 -64866965 + AluSx SINE Alu 1 303 -9 3032 221 56 15 chr18 21121969 21122873 -64866061 + L1ME1 LINE L1 5168 6143 -23 1081 172 20 34 chr18 21124232 21124436 -64864498 - MER20 DNA MER1_type 0 219 19 207 330 130 40 chr18 21124976 21125176 -64863758 - L2 LINE L2 -212 3060 2843 182 351 47 68 chr18 21125566 21125714 -64863220 + L2 LINE L2 2573 2717 -597 580 214 100 0 chr18 21126082 21126222 -64862712 + MSTD LTR MaLR 1 154 -242 465 156 0 0 chr18 21126286 21126363 -64862571 + MSTD LTR MaLR 320 396 0 256 264 66 11 chr18 21126386 21126477 -64862457 + L2 LINE L2 3182 3277 -36 250 254 0 17 chr18 21126554 21126613 -64862321 + Tigger5 DNA MER2_type 2264 2321 -2 741 209 181 7 chr18 21126613 21126890 -64862044 - L1MC3 LINE L1 -512 7273 6949 1453 195 3 84 chr18 21127014 21127184 -64861750 - L1MC3 LINE L1 -1958 5827 5703 2290 99 7 0 chr18 21127184 21127487 -64861447 - AluSp SINE Alu -8 305 1 1453 195 3 84 chr18 21127487 21127696 -64861238 - L1MC3 LINE L1 -2082 5703 5479 489 160 104 16 chr18 21127686 21127811 -64861123 - L1MC3 LINE L1 -942 5204 5069 * 2901 162 21 32 chr18 21127814 21128433 -64860501 - L1MB8 LINE L1 0 6178 5567 301 368 62 65 chr18 21128566 21128906 -64860028 - L2 LINE L2 -84 3188 2850 1532 179 79 0 chr18 21129168 21129447 -64859487 + AluJb SINE Alu 2 302 -10 283 200 33 0 chr18 21129692 21129752 -64859182 + HsTC2 DNA Tc2 1837 1898 0 539 270 106 29 chr18 21129760 21130071 -64858863 - L1ME4a LINE L1 -1 6120 5786 284 114 43 86 chr18 21130114 21130184 -64858750 - L1ME4a LINE L1 -439 5682 5616 29 0 0 25 chr18 21130187 21130215 -64858719 + AT_rich Low_complexity Low_complexity 1 29 -10 2032 131 3 0 chr18 21130215 21130506 -64858428 - AluSx SINE Alu -20 292 1 29 0 0 25 chr18 21130506 21130517 -64858417 + AT_rich Low_complexity Low_complexity 29 39 0 8692 241 72 22 chr18 21130989 21133624 -64855310 - L2 LINE L2 -182 3131 349 532 214 77 8 chr18 21133624 21133741 -64855193 + Cheshire DNA MER1_type 1 125 -2295 383 247 65 0 chr18 21133745 21133838 -64855096 - L2 LINE L2 -1014 2300 2202 3514 186 74 68 chr18 21133866 21134225 -64854709 + Cheshire DNA MER1_type 120 475 -1945 1714 161 4 8 chr18 21134225 21134492 -64854442 - AluJo SINE Alu -46 266 1 3514 186 74 68 chr18 21134492 21135064 -64853870 + Cheshire DNA MER1_type 475 1057 -1363 2146 123 8 64 chr18 21135170 21135527 -64853407 - MER1B DNA MER1_type 0 337 1 238 405 39 17 chr18 21136013 21136191 -64852743 + L2 LINE L2 2574 2755 -559 261 362 89 71 chr18 21136460 21136577 -64852357 + L2 LINE L2 2828 2941 -331 1783 175 0 20 chr18 21136577 21136880 -64852054 - AluJb SINE Alu -15 297 1 261 362 89 71 chr18 21136880 21137199 -64851735 + L2 LINE L2 2941 3272 0 1889 158 3 3 chr18 21139197 21139489 -64849445 + AluJb SINE Alu 2 293 -19 30 59 0 0 chr18 21139489 21139540 -64849394 + AT_rich Low_complexity Low_complexity 1 51 0 22 80 0 0 chr18 21139585 21139635 -64849299 + AT_rich Low_complexity Low_complexity 1 50 0 304 333 50 17 chr18 21139785 21139905 -64849029 + MIR SINE MIR 16 139 -69 2380 50 3 20 chr18 21140233 21140532 -64848402 - AluY SINE Alu -15 296 3 807 138 0 158 chr18 21140586 21140782 -64848152 - MER20 DNA MER1_type 0 219 55 543 171 154 17 chr18 21141074 21141191 -64847743 + AluJb SINE Alu 1 133 -179 190 274 59 0 chr18 21141781 21141832 -64847102 - MIR SINE MIR -142 120 67 2370 93 0 0 chr18 21141836 21142146 -64846788 + AluY SINE Alu 1 310 -1 1595 168 14 4 chr18 21142887 21143167 -64845767 + AluJb SINE Alu 1 283 -29 298 123 46 15 chr18 21144428 21144493 -64844441 + (TATATG)n Simple_repeat Simple_repeat 2 68 0 28 48 0 0 chr18 21144493 21144535 -64844399 + AT_rich Low_complexity Low_complexity 1 42 0 214 227 18 27 chr18 21145063 21145173 -64843761 + (TA)n Simple_repeat Simple_repeat 2 110 0 495 244 113 0 chr18 21146233 21146393 -64842541 + MER104 DNA MER2_type 3 180 0 875 118 0 29 chr18 21146760 21146896 -64842038 - FLAM_C SINE Alu 0 133 2 189 0 0 0 chr18 21146906 21146927 -64842007 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2057 108 7 4 chr18 21146927 21147204 -64841730 - AluSg SINE Alu -32 278 1 455 335 17 72 chr18 21147230 21147466 -64841468 - L2 LINE L2 -38 3234 3012 2010 122 7 10 chr18 21147975 21148271 -64840663 - AluSx SINE Alu -17 295 1 393 273 8 76 chr18 21150149 21150281 -64838653 - L2 LINE L2 -4 3309 3187 216 390 0 30 chr18 21150934 21151034 -64837900 - MIR SINE MIR -156 106 10 1452 181 31 19 chr18 21151314 21151573 -64837361 + AluJo SINE Alu 10 271 -41 1950 157 88 100 chr18 21151962 21152540 -64836394 - L1MB3 LINE L1 -1 6179 5609 837 154 0 0 chr18 21152546 21152669 -64836265 - FLAM_C SINE Alu -20 123 1 343 216 40 0 chr18 21152670 21152744 -64836190 - L1MB3 LINE L1 -573 5607 5531 301 169 6 6 chr18 21152744 21152812 -64836122 - Alu SINE Alu -261 42 1 5634 212 29 24 chr18 21152812 21153985 -64834949 - L1M3 LINE L1 -600 6081 4887 2268 77 0 49 chr18 21153985 21154310 -64834624 - AluY SINE Alu -2 309 1 5634 212 29 24 chr18 21154310 21154814 -64834120 - L1M3 LINE L1 -1794 4887 4387 1656 177 10 23 chr18 21154816 21155121 -64833813 - AluJo SINE Alu 0 312 12 275 244 11 0 chr18 21155128 21155218 -64833716 - L1M3 LINE L1 -2685 3959 3869 1662 152 3 54 chr18 21155225 21155541 -64833393 + AluSx SINE Alu 1 300 -12 691 230 32 16 chr18 21155542 21155794 -64833140 - L1M3 LINE L1 -4039 2607 2352 2809 190 61 73 chr18 21155875 21156417 -64832517 - L1M3 LINE L1 -4844 1698 1168 2556 62 0 3 chr18 21156417 21156723 -64832211 - AluY SINE Alu -4 307 3 2809 190 61 73 chr18 21156723 21157060 -64831874 - L1M3 LINE L1 -5374 1168 829 439 250 40 26 chr18 21157076 21157228 -64831706 - L1M3 LINE L1 -6384 158 5 561 284 90 5 chr18 21157588 21157789 -64831145 - MER20 DNA MER1_type 0 219 2 27 62 0 0 chr18 21158209 21158257 -64830677 + AT_rich Low_complexity Low_complexity 1 48 0 216 0 0 0 chr18 21159603 21159627 -64829307 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2211 93 0 0 chr18 21159634 21159912 -64829022 - AluSg SINE Alu -32 278 1 2755 7 0 0 chr18 21160079 21160375 -64828559 + AluY SINE Alu 15 310 -1 606 215 47 110 chr18 21160432 21160623 -64828311 + MIR SINE MIR 84 262 0 302 295 78 70 chr18 21160708 21160837 -64828097 - L2 LINE L2 0 3272 3143 2302 119 0 0 chr18 21160887 21161199 -64827735 + AluSx SINE Alu 1 312 0 2442 87 3 0 chr18 21161652 21161964 -64826970 - AluSp SINE Alu 0 313 1 1808 122 10 66 chr18 21162385 21162689 -64826245 - AluSx SINE Alu -25 287 1 255 300 12 0 chr18 21163614 21163694 -64825240 + (TAG)n Simple_repeat Simple_repeat 3 83 0 733 226 15 88 chr18 21164017 21164278 -64824656 + MER46C DNA MER2_type 2 243 -95 2521 133 0 0 chr18 21164864 21165249 -64823685 - L1MB3 LINE L1 -17 6166 5782 207 100 0 0 chr18 21165252 21165282 -64823652 + (CA)n Simple_repeat Simple_repeat 2 31 0 407 286 52 7 chr18 21165306 21165460 -64823474 - LTR33 LTR ERVL -58 463 303 230 299 33 92 chr18 21166534 21166838 -64822096 + L2 LINE L2 1912 2197 -1117 217 368 24 72 chr18 21167309 21167475 -64821459 + L2 LINE L2 2866 3023 -249 184 368 158 0 chr18 21167651 21167746 -64821188 + L2 LINE L2 3202 3311 -2 21 57 0 0 chr18 21168214 21168249 -64820685 + AT_rich Low_complexity Low_complexity 1 35 0 2510 49 0 16 chr18 21168310 21168614 -64820320 - AluY SINE Alu -12 299 1 1556 149 0 4 chr18 21168725 21168973 -64819961 + AluSx SINE Alu 55 301 -11 23 0 0 0 chr18 21169228 21169251 -64819683 + AT_rich Low_complexity Low_complexity 1 23 0 2283 103 0 0 chr18 21169577 21169878 -64819056 - AluSq SINE Alu -12 301 1 2441 77 0 3 chr18 21170124 21170435 -64818499 - AluY SINE Alu -1 310 1 282 355 97 16 chr18 21170485 21170609 -64818325 - L2 LINE L2 0 3272 3139 2440 76 3 0 chr18 21170636 21170940 -64817994 + AluY SINE Alu 1 305 -6 21 0 0 0 chr18 21171310 21171331 -64817603 + AT_rich Low_complexity Low_complexity 1 21 0 210 268 156 45 chr18 21171391 21171570 -64817364 - L2 LINE L2 -825 2489 2291 1609 198 97 20 chr18 21171798 21172133 -64816801 + Charlie4a DNA MER1_type 18 399 -1562 2245 102 0 26 chr18 21172133 21172438 -64816496 - AluSx SINE Alu -15 297 1 1609 198 97 20 chr18 21172438 21172557 -64816377 + Charlie4a DNA MER1_type 399 507 -1 8904 214 91 40 chr18 21173663 21174038 -64814896 + L1MD2 LINE L1 24 379 -6161 2378 68 7 16 chr18 21174038 21174346 -64814588 - AluY SINE Alu -6 305 1 8904 214 91 40 chr18 21174346 21175877 -64813057 + L1MD2 LINE L1 379 1831 -4709 1880 143 7 30 chr18 21175877 21176177 -64812757 + AluSx SINE Alu 1 293 -19 8904 214 91 40 chr18 21176177 21176372 -64812562 + L1MD2 LINE L1 1831 2015 -4525 2085 147 0 6 chr18 21176372 21176686 -64812248 + AluJb SINE Alu 1 312 0 8904 214 91 40 chr18 21176686 21178253 -64810681 + L1MD2 LINE L1 2015 3875 -2665 2480 196 25 12 chr18 21178280 21178799 -64810135 + L1MD2 LINE L1 5753 6278 -475 1132 53 0 0 chr18 21178815 21178946 -64809988 + AluSc SINE Alu 1 131 -178 1036 203 52 12 chr18 21178955 21179344 -64809590 + L1MD2 LINE L1 6270 6732 -21 203 247 148 12 chr18 21179355 21179436 -64809498 - MIR3 SINE MIR -6 202 111 1162 145 6 0 chr18 21179555 21179727 -64809207 + AluSx SINE Alu 1 173 -139 35 54 0 0 chr18 21180205 21180261 -64808673 + AT_rich Low_complexity Low_complexity 1 56 0 727 238 41 17 chr18 21180290 21180462 -64808472 - MER5B DNA MER1_type -1 177 2 443 278 17 100 chr18 21180524 21180823 -64808111 + L1MC4a LINE L1 5611 5884 -1924 1155 114 14 21 chr18 21181786 21182076 -64806858 - L1MB4 LINE L1 0 6180 5748 323 63 63 0 chr18 21182097 21182160 -64806774 - L1MB2 LINE L1 -2 6169 6103 2043 146 0 10 chr18 21182225 21182533 -64806401 - AluJo SINE Alu -7 305 1 313 319 141 7 chr18 21183344 21183479 -64805455 + MIR3 SINE MIR 54 206 -2 431 231 74 8 chr18 21183868 21183989 -64804945 - MER58C DNA MER1_type -60 155 27 878 113 188 54 chr18 21184225 21184411 -64804523 - MER46A DNA MER2_type -25 211 1 2547 221 57 96 chr18 21184411 21185088 -64803846 - L1MC5 LINE L1 -80 7881 7280 1887 164 7 0 chr18 21185088 21185387 -64803547 + AluJb SINE Alu 1 301 -11 2547 221 57 96 chr18 21185387 21186030 -64802904 - L1MC5 LINE L1 -681 7280 6613 2344 90 3 3 chr18 21186341 21186641 -64802293 - AluSc SINE Alu -8 301 2 3754 168 24 39 chr18 21186679 21187476 -64801458 - L1MB5 LINE L1 -1 7592 6808 1651 191 9 59 chr18 21187477 21187565 -64801369 - L1MB5 LINE L1 -1213 6352 6261 1898 159 0 3 chr18 21187565 21187866 -64801068 + AluJb SINE Alu 1 300 -12 1651 191 9 59 chr18 21187866 21188201 -64800733 - L1MB5 LINE L1 -1304 6261 5950 269 153 9 8 chr18 21188201 21188419 -64800515 + AluJb SINE Alu 1 296 -6 567 194 70 30 chr18 21188421 21188622 -64800312 - L1MB5 LINE L1 -1601 5964 5756 21 0 0 0 chr18 21188806 21188827 -64800107 + AT_rich Low_complexity Low_complexity 1 21 0 4344 169 143 57 chr18 21188955 21189219 -64799715 - L1MB5 LINE L1 -2346 5219 4979 2271 100 3 16 chr18 21189219 21189530 -64799404 + AluSx SINE Alu 1 307 -5 4344 169 143 57 chr18 21189530 21189991 -64798943 - L1MB5 LINE L1 -2586 4979 4559 2317 93 0 3 chr18 21189991 21190291 -64798643 + AluSq SINE Alu 1 299 -14 4344 169 143 57 chr18 21190291 21191508 -64797426 - L1MB5 LINE L1 -3006 4559 3062 274 100 25 0 chr18 21191506 21191546 -64797388 - L1MB5 LINE L1 -5852 1713 1673 * 6873 122 74 10 chr18 21191555 21192699 -64796235 - L1M1 LINE L1 -4925 2640 1099 744 121 57 0 chr18 21192687 21192811 -64796123 - L1M1 LINE L1 -7423 142 12 * 1328 106 48 0 chr18 21192812 21193020 -64795914 - L1MA6 LINE L1 0 6300 6083 1330 178 28 0 chr18 21193563 21193776 -64795158 - AluJo SINE Alu -93 219 1 30 45 0 0 chr18 21193776 21193820 -64795114 + AT_rich Low_complexity Low_complexity 1 44 0 21 36 0 0 chr18 21194058 21194086 -64794848 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr18 21194246 21194275 -64794659 + AT_rich Low_complexity Low_complexity 1 29 0 1164 141 0 6 chr18 21194610 21194780 -64794154 - AluSq SINE Alu -144 169 1 695 154 14 21 chr18 21194780 21194923 -64794011 + L1ME1 LINE L1 5855 5996 -170 * 2904 197 99 47 chr18 21194912 21195784 -64793150 + L1MC3 LINE L1 6036 6952 -833 228 322 42 42 chr18 21195978 21196096 -64792838 + L2 LINE L2 2590 2707 -607 285 303 0 55 chr18 21196120 21196229 -64792705 - L2 LINE L2 -1 3312 3210 344 184 119 55 chr18 21197142 21197343 -64791591 + L1MC5 LINE L1 7125 7338 -623 988 198 30 25 chr18 21197348 21197550 -64791384 + MER3 DNA MER1_type 7 209 0 244 220 0 0 chr18 21197507 21197557 -64791377 - MER3 DNA MER1_type -119 90 41 * 354 240 32 24 chr18 21197560 21197685 -64791249 + L1MC5 LINE L1 7340 7465 -496 242 287 54 54 chr18 21197920 21198049 -64790885 + MIR3 SINE MIR 43 171 -37 870 150 0 0 chr18 21198049 21198176 -64790758 - FLAM_C SINE Alu -6 127 1 1893 97 0 0 chr18 21198291 21198528 -64790406 + AluSg SINE Alu 3 239 -71 2336 63 7 0 chr18 21198780 21199067 -64789867 + AluY SINE Alu 2 290 -21 1830 160 0 19 chr18 21200342 21200655 -64788279 + AluJo SINE Alu 1 307 -5 21 36 0 0 chr18 21201646 21201674 -64787260 + AT_rich Low_complexity Low_complexity 1 28 0 937 126 0 0 chr18 21201674 21201801 -64787133 - FLAM_C SINE Alu -16 127 1 250 318 23 39 chr18 21202295 21202424 -64786510 + L2 LINE L2 2291 2417 -897 443 290 138 38 chr18 21202819 21203160 -64785774 - L2 LINE L2 -1 3312 2938 383 309 36 14 chr18 21203185 21203324 -64785610 - L2 LINE L2 -561 2753 2612 1965 152 0 7 chr18 21203394 21203696 -64785238 + AluSx SINE Alu 1 300 -12 461 232 28 49 chr18 21203707 21203849 -64785085 - L2 LINE L2 -919 2395 2257 25 31 0 0 chr18 21203970 21204002 -64784932 + AT_rich Low_complexity Low_complexity 1 32 0 197 324 59 0 chr18 21204052 21204120 -64784814 + MIR SINE MIR 54 125 -137 190 50 75 125 chr18 21204933 21204973 -64783961 + L2 LINE L2 3224 3261 -52 1697 155 23 30 chr18 21205601 21205904 -64783030 + AluJb SINE Alu 1 301 -11 365 346 113 34 chr18 21206049 21206494 -64782440 - L2 LINE L2 0 3272 2773 1756 143 57 4 chr18 21206650 21206930 -64782004 - AluJb SINE Alu -17 295 1 1855 150 21 0 chr18 21209210 21209496 -64779438 + AluSx SINE Alu 1 292 -20 2351 81 0 3 chr18 21210353 21210649 -64778285 - AluY SINE Alu -16 295 1 2277 104 0 0 chr18 21210828 21211127 -64777807 - AluY SINE Alu -12 299 1 1925 215 55 56 chr18 21211127 21211712 -64777222 - L1ME2 LINE L1 -9 6155 5572 252 146 0 0 chr18 21212010 21212051 -64776883 - Charlie8 DNA MER1_type -2258 159 119 182 296 74 25 chr18 21212105 21212186 -64776748 - L2 LINE L2 -42 3271 3187 219 336 102 86 chr18 21212375 21212561 -64776373 - L2 LINE L2 -1143 2171 1989 2058 112 7 7 chr18 21212561 21212866 -64776068 + AluY SINE Alu 1 305 -6 219 336 102 86 chr18 21212866 21213051 -64775883 - L2 LINE L2 -1325 1989 1794 990 271 52 70 chr18 21213056 21213498 -64775436 + L2 LINE L2 2875 3308 -5 314 267 58 33 chr18 21213648 21213768 -64775166 - L2 LINE L2 0 3313 3191 556 253 149 6 chr18 21214162 21214336 -64774598 + L2 LINE L2 1276 1474 -1840 294 352 23 57 chr18 21214336 21214410 -64774524 - L2 LINE L2 -1277 2037 1962 2152 44 89 0 chr18 21214410 21214681 -64774253 + AluY SINE Alu 2 296 -15 294 352 23 57 chr18 21214681 21214782 -64774152 - L2 LINE L2 -1352 1962 1868 2916 279 159 28 chr18 21214786 21214902 -64774032 + L2 LINE L2 1476 1575 -1738 1978 125 17 3 chr18 21214902 21215190 -64773744 + AluSx SINE Alu 1 292 -20 2916 279 159 28 chr18 21215190 21215306 -64773628 + L2 LINE L2 1575 1674 -1639 2151 85 4 7 chr18 21215306 21215587 -64773347 + AluSp SINE Alu 3 282 -31 2916 279 159 28 chr18 21215587 21216765 -64772169 + L2 LINE L2 1674 3249 -64 495 0 0 0 chr18 21216765 21216820 -64772114 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1267 124 5 5 chr18 21216844 21217029 -64771905 - AluSg SINE Alu -125 185 1 417 39 0 0 chr18 21217133 21217184 -64771750 + (TG)n Simple_repeat Simple_repeat 2 52 0 223 182 23 0 chr18 21217261 21217305 -64771629 - L2 LINE L2 -2 3311 3267 543 259 70 60 chr18 21217470 21217671 -64771263 - MIR3 SINE MIR -3 205 3 21 0 0 0 chr18 21218160 21218181 -64770753 + AT_rich Low_complexity Low_complexity 1 21 0 560 313 50 11 chr18 21218671 21218853 -64770081 + MIR SINE MIR 48 236 -26 359 315 45 18 chr18 21218894 21219019 -64769915 - MIR SINE MIR -72 136 31 2005 124 7 3 chr18 21219880 21220178 -64768756 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr18 21220523 21220544 -64768390 + AT_rich Low_complexity Low_complexity 1 21 0 619 61 0 30 chr18 21223003 21223102 -64765832 + (TATG)n Simple_repeat Simple_repeat 1 96 0 1804 126 19 4 chr18 21223107 21223377 -64765557 - AluJb SINE Alu -38 274 1 424 226 235 0 chr18 21226558 21226673 -64762261 + FLAM_A SINE Alu 1 142 0 368 366 0 24 chr18 21226856 21227020 -64761914 + MIR SINE MIR 1 160 -102 21 57 0 0 chr18 21227421 21227456 -64761478 + AT_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr18 21228694 21228731 -64760203 + AT_rich Low_complexity Low_complexity 1 37 0 2387 82 0 0 chr18 21228974 21229267 -64759667 + AluSq SINE Alu 1 293 -20 507 50 87 12 chr18 21229267 21229523 -64759411 + (TA)n Simple_repeat Simple_repeat 1 275 0 1170 194 5 5 chr18 21229548 21229764 -64759170 - MER2 DNA MER2_type -129 216 1 23 33 0 0 chr18 21230028 21230058 -64758876 + AT_rich Low_complexity Low_complexity 1 30 0 2800 209 79 29 chr18 21230302 21230439 -64758495 - L1ME2 LINE L1 -9 6155 6026 723 163 32 0 chr18 21230439 21230562 -64758372 + FLAM_C SINE Alu 1 127 -6 2800 209 79 29 chr18 21230562 21230602 -64758332 - L1ME2 LINE L1 -138 6026 5989 2312 87 0 16 chr18 21230602 21230911 -64758023 + AluSg SINE Alu 1 304 -6 2800 209 79 29 chr18 21230911 21231678 -64757256 - L1ME2 LINE L1 -175 5989 5169 1128 176 96 8 chr18 21231905 21232144 -64756790 - MER2 DNA MER2_type 0 345 86 248 154 19 0 chr18 21232166 21232218 -64756716 + CT-rich Low_complexity Low_complexity 2 54 0 243 191 0 0 chr18 21232231 21232273 -64756661 - MER2 DNA MER2_type -303 42 1 377 86 35 0 chr18 21232278 21232336 -64756598 - L1M4 LINE L1 -1922 4224 4165 * 3539 172 64 33 chr18 21232327 21233093 -64755841 - L1MD2 LINE L1 -232 6127 5338 22 35 0 0 chr18 21233763 21233792 -64755142 + AT_rich Low_complexity Low_complexity 1 29 0 2148 94 3 14 chr18 21233806 21234093 -64754841 - AluSx SINE Alu -28 284 1 2657 57 0 0 chr18 21235252 21235583 -64753351 - L1PA7 LINE L1 -2 6152 5822 2208 107 10 10 chr18 21235590 21235890 -64753044 - AluSx SINE Alu -12 300 1 360 0 0 0 chr18 21235962 21236002 -64752932 + (TTCA)n Simple_repeat Simple_repeat 3 42 0 2106 110 3 0 chr18 21236002 21236284 -64752650 - AluSx SINE Alu -28 284 2 328 276 35 76 chr18 21236323 21236468 -64752466 - MIR SINE MIR -110 152 14 1732 192 109 17 chr18 21238706 21239128 -64749806 + LTR40b LTR ERVL 1 461 -1 270 321 12 0 chr18 21239606 21239620 -64749314 - LTR67 LTR ERVL -377 180 100 278 167 30 61 chr18 21239620 21239686 -64749248 - MLT1J2 LTR MaLR -327 123 60 491 236 300 3 chr18 21239961 21240258 -64748676 - L1ME2 LINE L1 -1113 5033 4649 2463 67 0 7 chr18 21240258 21240558 -64748376 - AluSq SINE Alu -13 300 3 354 195 232 0 chr18 21240749 21240831 -64748103 - AluJ/FLAM SINE Alu -201 101 1 2060 97 0 14 chr18 21241550 21241829 -64747105 + AluY SINE Alu 1 275 -36 216 0 0 0 chr18 21241833 21241857 -64747077 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1761 142 0 7 chr18 21241953 21242252 -64746682 - AluSq SINE Alu 0 307 11 290 297 0 47 chr18 21242273 21242421 -64746513 + T-rich Low_complexity Low_complexity 5 145 0 842 207 84 22 chr18 21242791 21243018 -64745916 + LTR24B LTR ERV1 121 361 -215 714 245 34 10 chr18 21243080 21243288 -64745646 + LTR24 LTR ERV1 251 463 -4 353 223 76 19 chr18 21243288 21243445 -64745489 - L1M4 LINE L1 -854 5292 5127 297 299 95 29 chr18 21243470 21243918 -64745016 - L1MDa LINE L1 -4501 1714 1317 1732 111 0 75 chr18 21243929 21244262 -64744672 + AluSq SINE Alu 1 308 -5 2737 189 92 8 chr18 21244280 21245031 -64743903 - L1ME2 LINE L1 -185 5979 5169 1071 183 96 12 chr18 21245266 21245506 -64743428 - MER2 DNA MER2_type 0 345 86 234 128 0 0 chr18 21245543 21245582 -64743352 + (TC)n Simple_repeat Simple_repeat 2 40 0 243 191 0 0 chr18 21245595 21245637 -64743297 - MER2 DNA MER2_type -303 42 1 347 85 34 17 chr18 21245642 21245701 -64743233 - L1M4 LINE L1 -1922 4224 4165 * 3564 173 63 33 chr18 21245692 21246459 -64742475 - L1MD2 LINE L1 -232 6127 5338 22 35 0 0 chr18 21247137 21247166 -64741768 + AT_rich Low_complexity Low_complexity 1 29 0 2113 94 3 17 chr18 21247180 21247468 -64741466 - AluSx SINE Alu -28 284 1 2357 100 0 0 chr18 21248636 21248967 -64739967 - L1PA7 LINE L1 -2 6152 5822 2176 106 10 13 chr18 21248974 21249275 -64739659 - AluSx SINE Alu -12 300 1 396 0 0 0 chr18 21249349 21249393 -64739541 + (TTCA)n Simple_repeat Simple_repeat 3 46 0 2057 108 4 4 chr18 21249393 21249672 -64739262 - AluSx SINE Alu -28 284 6 328 276 35 76 chr18 21249717 21249862 -64739072 - MIR SINE MIR -110 152 14 1026 176 6 34 chr18 21252087 21257180 -64731754 + ALR/Alpha Satellite centromeric 1 4952 -1 1083 175 7 20 chr18 21257193 21258903 -64730031 + ALR/Alpha Satellite centromeric 1 1688 -14 1608 154 49 11 chr18 21259385 21259670 -64729264 + AluJb SINE Alu 1 296 -16 2013 144 7 10 chr18 21260775 21261081 -64727853 - AluJb SINE Alu -7 305 1 324 319 208 0 chr18 21261403 21261619 -64727315 + L1M4 LINE L1 4016 4276 -1870 1722 187 79 15 chr18 21261715 21262057 -64726877 - THE1B LTR MaLR 0 364 1 11345 88 26 7 chr18 21262057 21262113 -64726821 - THE1B-int LTR MaLR 0 1580 1527 2041 154 13 0 chr18 21262113 21262419 -64726515 + AluSx SINE Alu 1 310 -2 11345 88 26 7 chr18 21262419 21263912 -64725022 - THE1B-int LTR MaLR -53 1527 1 2035 140 76 15 chr18 21263912 21264254 -64724680 - THE1B LTR MaLR 0 364 2 1619 176 0 4 chr18 21264254 21264515 -64724419 - AluJb SINE Alu -31 281 22 236 242 91 0 chr18 21264632 21264698 -64724236 + MER102a DNA MER1_type 227 298 -32 1146 150 1 0 chr18 21264771 21267048 -64721886 + ALR/Alpha Satellite centromeric 1 2280 -65 1095 172 4 0 chr18 21267150 21289110 -64699824 - ALR/Alpha Satellite centromeric 0 22043 1 1046 168 4 5 chr18 21289359 21297031 -64691903 + ALR/Alpha Satellite centromeric 1 7658 0 1084 183 4 8 chr18 21297116 21302531 -64686403 + ALR/Alpha Satellite centromeric 1 5396 0 1083 176 4 2 chr18 21302542 21305466 -64683468 + ALR/Alpha Satellite centromeric 1 2930 -59 379 310 86 17 chr18 21506407 21506639 -64482295 + L2 LINE L2 2429 2676 -638 24 0 0 0 chr18 21506675 21506699 -64482235 + AT_rich Low_complexity Low_complexity 1 24 0 1012 87 0 0 chr18 21506838 21506965 -64481969 - AluSp SINE Alu -181 132 6 1928 157 36 0 chr18 21507065 21507397 -64481537 + MER2 DNA MER2_type 1 344 0 296 273 13 0 chr18 21507636 21507713 -64481221 + L1ME LINE L1 5522 5599 -522 389 252 52 7 chr18 21507894 21508029 -64480905 - L1MEc LINE L1 -6219 177 37 212 269 0 0 chr18 21508030 21508082 -64480852 + L2 LINE L2 2192 2243 -1071 2067 124 7 10 chr18 21508244 21508535 -64480399 - AluSx SINE Alu -22 290 1 830 140 73 7 chr18 21508887 21509037 -64479897 + AluJb SINE Alu 137 296 -16 2040 75 7 34 chr18 21509039 21509358 -64479576 + AluY SINE Alu 1 311 0 781 177 8 0 chr18 21509475 21509605 -64479329 - AluJb SINE Alu -181 131 1 1536 178 46 20 chr18 21510756 21511059 -64477875 - AluJo SINE Alu -1 311 1 333 340 13 47 chr18 21511061 21511211 -64477723 - HAL1 LINE L1 -586 1921 1777 387 253 0 11 chr18 21511215 21511302 -64477632 - L2 LINE L2 -7 3306 3221 908 264 150 17 chr18 21511308 21511940 -64476994 - HAL1 LINE L1 -764 1743 1020 246 32 0 0 chr18 21511940 21511971 -64476963 + (TG)n Simple_repeat Simple_repeat 2 32 0 908 264 150 17 chr18 21511971 21511993 -64476941 - HAL1 LINE L1 -1487 1020 1002 2372 81 0 31 chr18 21512089 21512410 -64476524 - AluY SINE Alu 0 311 1 295 149 15 0 chr18 21512422 21512489 -64476445 - L1MB8 LINE L1 0 6184 6115 1639 159 32 0 chr18 21512495 21512778 -64476156 + AluJb SINE Alu 6 297 -15 527 229 206 0 chr18 21512823 21512954 -64475980 - FRAM SINE Alu -8 158 1 316 141 39 0 chr18 21512955 21513033 -64475901 - MER20B DNA MER1_type -38 745 665 356 289 123 11 chr18 21513075 21513262 -64475672 - MER20B DNA MER1_type -196 587 380 1353 75 139 5 chr18 21513776 21513977 -64474957 - MER30 DNA MER1_type 0 230 3 229 313 16 0 chr18 21514021 21514085 -64474849 - MER5A DNA MER1_type -56 133 69 240 314 65 65 chr18 21514150 21514274 -64474660 - L3 LINE CR1 -35 1542 1419 23 33 0 0 chr18 21514659 21514689 -64474245 + AT_rich Low_complexity Low_complexity 1 30 0 1353 139 60 4 chr18 21515260 21515541 -64473393 + MER33 DNA MER1_type 1 297 -27 743 79 0 20 chr18 21515584 21515685 -64473249 + AluSg/x SINE Alu 199 297 -12 1999 135 28 0 chr18 21515697 21515986 -64472948 + AluSx SINE Alu 1 297 -15 2177 121 0 0 chr18 21516438 21516735 -64472199 - AluSx SINE Alu -10 302 6 546 281 83 70 chr18 21516828 21517226 -64471708 - L2 LINE L2 -369 2945 2543 561 124 0 0 chr18 21517236 21517333 -64471601 + (TG)n Simple_repeat Simple_repeat 1 97 0 332 227 76 59 chr18 21517333 21517452 -64471482 - FLAM_C SINE Alu -12 121 1 259 351 120 40 chr18 21517543 21517819 -64471115 - L2 LINE L2 -1900 1414 1117 370 282 77 35 chr18 21518457 21518531 -64470403 - L2 LINE L2 -1 3312 3243 1581 154 7 35 chr18 21518531 21518816 -64470118 - AluJo SINE Alu -5 307 31 370 282 77 35 chr18 21518816 21518911 -64470023 - L2 LINE L2 -70 3243 3136 280 285 289 26 chr18 21519010 21519280 -64469654 - L2 LINE L2 -338 2976 2636 361 271 107 8 chr18 21519370 21519492 -64469442 - MIR SINE MIR -18 244 111 1719 58 31 0 chr18 21520197 21520422 -64468512 - L1PA5 LINE L1 -16 6138 5907 356 281 94 0 chr18 21520459 21520587 -64468347 + MIR SINE MIR 47 186 -76 384 205 55 106 chr18 21520816 21521109 -64467825 - L1MC5 LINE L1 -45 7916 7639 1954 140 14 7 chr18 21521768 21522061 -64466873 - AluSx SINE Alu -17 295 1 2031 143 48 35 chr18 21522720 21523118 -64465816 - L1PA15 LINE L1 -21 6144 5742 1870 137 45 0 chr18 21523145 21523437 -64465497 - AluJb SINE Alu -7 305 1 312 111 0 0 chr18 21523448 21523502 -64465432 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 1701 181 0 3 chr18 21523504 21523786 -64465148 - AluJb SINE Alu -31 281 1 1054 176 6 11 chr18 21523790 21523972 -64464962 - AluJ SINE Alu -11 301 121 882 135 35 7 chr18 21524002 21524143 -64464791 - AluJ SINE Alu -167 145 1 249 203 133 94 chr18 21524328 21524456 -64464478 - L3 LINE CR1 -231 1346 1214 * 639 348 9 39 chr18 21524423 21524756 -64464178 + L2 LINE L2 2818 3140 -173 1767 114 0 137 chr18 21524763 21525113 -64463821 - AluSx SINE Alu 0 302 1 708 306 141 0 chr18 21525454 21525950 -64462984 - HAL1 LINE L1 -278 2229 1664 324 238 50 0 chr18 21525961 21526062 -64462872 - L1MC5 LINE L1 -45 7916 7811 409 221 196 6 chr18 21526149 21526307 -64462627 - HAL1 LINE L1 -832 1675 1488 437 141 39 0 chr18 21526354 21526432 -64462502 - AluJ SINE Alu -183 129 49 624 271 122 71 chr18 21526433 21526842 -64462092 - HAL1 LINE L1 -1013 1494 1065 261 0 0 0 chr18 21526843 21526872 -64462062 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 458 237 23 69 chr18 21526874 21527005 -64461929 - FLAM_C SINE Alu -16 127 3 2284 256 83 59 chr18 21527009 21527114 -64461820 - HAL1 LINE L1 -1427 1080 979 1148 174 10 0 chr18 21527114 21527321 -64461613 + MER6B DNA MER2_type 2 210 0 2284 256 83 59 chr18 21527321 21528037 -64460897 - HAL1 LINE L1 -1528 979 226 829 174 100 5 chr18 21528037 21528227 -64460707 + MER3 DNA MER1_type 1 208 -1 2284 256 83 59 chr18 21528227 21528449 -64460485 - HAL1 LINE L1 -2281 226 11 990 104 0 15 chr18 21528669 21528804 -64460130 + FLAM_C SINE Alu 1 133 0 1832 139 17 23 chr18 21528932 21529234 -64459700 - AluSx SINE Alu -9 303 4 2292 94 0 0 chr18 21529295 21529592 -64459342 + AluY SINE Alu 1 297 -14 292 236 122 8 chr18 21529656 21529779 -64459155 - L1ME4a LINE L1 -1 6120 5984 418 168 88 64 chr18 21530241 21530366 -64458568 + L1MC/D LINE L1 5669 5796 -563 24 0 0 0 chr18 21531405 21531429 -64457505 + AT_rich Low_complexity Low_complexity 1 24 0 1547 156 85 22 chr18 21531429 21531699 -64457235 - AluJb SINE Alu -25 287 1 26 30 0 0 chr18 21532030 21532063 -64456871 + AT_rich Low_complexity Low_complexity 1 33 0 1973 151 7 0 chr18 21533397 21533702 -64455232 + AluSx SINE Alu 1 307 -5 1102 186 7 136 chr18 21533710 21533920 -64455014 + L1 LINE L1 4282 4517 -1629 1514 205 14 14 chr18 21533920 21534208 -64454726 + AluJo SINE Alu 1 288 -24 1102 186 7 136 chr18 21534208 21534247 -64454687 + L1 LINE L1 4517 4559 -1587 2543 60 0 0 chr18 21534247 21534548 -64454386 + AluY SINE Alu 1 301 -10 1102 186 7 136 chr18 21534548 21534716 -64454218 + L1 LINE L1 4559 4646 -1500 224 335 27 97 chr18 21534760 21534945 -64453989 + L2 LINE L2 2805 2976 -337 239 204 0 0 chr18 21535150 21535194 -64453740 + L2 LINE L2 3261 3304 -9 2269 67 3 63 chr18 21535324 21535640 -64453294 - AluSp SINE Alu -16 297 1 24 32 0 0 chr18 21535827 21535858 -64453076 + AT_rich Low_complexity Low_complexity 1 31 0 277 346 53 15 chr18 21536122 21536255 -64452679 - MIR SINE MIR -121 141 4 945 162 7 7 chr18 21536724 21536878 -64452056 - AluJo SINE Alu -12 290 137 416 143 14 0 chr18 21536878 21536948 -64451986 - AluJo SINE Alu -176 136 66 1441 97 63 37 chr18 21536949 21537143 -64451791 - Tigger1 DNA MER2_type -832 1586 1381 1539 78 5 34 chr18 21537143 21537367 -64451567 + AluSg/x SINE Alu 83 300 0 1441 97 63 37 chr18 21537367 21537438 -64451496 - Tigger1 DNA MER2_type -1037 1381 1313 855 223 77 21 chr18 21537438 21537671 -64451263 + LTR8 LTR ERV1 1 246 -445 956 237 40 117 chr18 21537676 21538221 -64450713 + LTR8 LTR ERV1 153 655 -36 7652 119 37 26 chr18 21538263 21539134 -64449800 - Tigger1 DNA MER2_type -1101 1317 457 1858 111 67 30 chr18 21539134 21539432 -64449502 - AluJb SINE Alu 0 312 4 7652 119 37 26 chr18 21539432 21539633 -64449301 - Tigger1 DNA MER2_type -1961 457 260 2322 73 3 10 chr18 21539633 21539933 -64449001 + AluY SINE Alu 1 298 -13 7652 119 37 26 chr18 21539933 21540161 -64448773 - Tigger1 DNA MER2_type -2158 260 2 1923 127 25 11 chr18 21540760 21541043 -64447891 - AluJo SINE Alu -15 297 11 1107 270 90 64 chr18 21541061 21541313 -64447621 + L1MC4a LINE L1 5618 5862 -1946 2280 88 0 0 chr18 21541313 21541597 -64447337 + AluSc SINE Alu 1 284 -25 1107 270 90 64 chr18 21541597 21542302 -64446632 + L1MC4a LINE L1 5862 6612 -1196 2670 49 0 0 chr18 21542302 21542607 -64446327 + AluY SINE Alu 1 305 -6 1107 270 90 64 chr18 21542607 21542776 -64446158 + L1MC4a LINE L1 6612 6775 -1033 538 148 39 110 chr18 21542806 21542988 -64445946 + L1MC5 LINE L1 6882 7050 -911 2281 108 0 3 chr18 21543266 21543572 -64445362 + AluY SINE Alu 2 306 -5 245 230 203 14 chr18 21543800 21543874 -64445060 - L2 LINE L2 -1 3271 3184 1846 157 3 41 chr18 21544129 21544262 -64444672 + AluJb SINE Alu 1 137 -175 2193 79 7 17 chr18 21544262 21544552 -64444382 + AluSp SINE Alu 1 287 -26 1846 157 3 41 chr18 21544552 21544736 -64444198 + AluJb SINE Alu 137 306 -6 21 0 0 0 chr18 21544846 21544867 -64444067 + AT_rich Low_complexity Low_complexity 1 21 0 2140 99 3 32 chr18 21544874 21545188 -64443746 - AluSx SINE Alu -7 305 1 450 280 127 13 chr18 21545638 21545795 -64443139 - MIR3 SINE MIR -14 194 20 251 208 151 0 chr18 21546067 21546120 -64442814 + MER5B DNA MER1_type 69 129 -49 316 109 0 0 chr18 21546132 21546178 -64442756 - AluJo SINE Alu -36 266 221 782 109 58 44 chr18 21546178 21546315 -64442619 - AluJo SINE Alu -124 188 50 356 141 14 42 chr18 21546327 21546398 -64442536 + MER5B DNA MER1_type 110 178 0 618 213 134 0 chr18 21546424 21546551 -64442383 - MER5A DNA MER1_type 0 189 46 509 106 0 0 chr18 21547782 21547848 -64441086 - AluY SINE Alu -21 290 225 1259 65 0 13 chr18 21547848 21548002 -64440932 - AluY SINE Alu -159 152 1 1260 169 81 35 chr18 21548019 21548278 -64440656 + Charlie1 DNA MER1_type 2366 2649 -112 1611 144 0 120 chr18 21548278 21548619 -64440315 - AluJo SINE Alu -2 300 1 1260 169 81 35 chr18 21548619 21548731 -64440203 + Charlie1 DNA MER1_type 2649 2754 -7 2585 126 28 87 chr18 21548735 21548752 -64440182 + LTR26B LTR ERV1 1 17 -514 3883 121 8 47 chr18 21548752 21548870 -64440064 - MER41B LTR ERV1 0 635 514 2294 107 0 0 chr18 21548870 21549170 -64439764 + AluSx SINE Alu 1 300 -12 2147 125 0 0 chr18 21549173 21549468 -64439466 + AluSg SINE Alu 1 295 -15 3883 121 8 47 chr18 21549468 21549482 -64439452 - MER41B LTR ERV1 -123 512 499 2115 108 3 59 chr18 21549482 21549805 -64439129 + AluSx SINE Alu 7 311 -1 3883 121 8 47 chr18 21549805 21550328 -64438606 - MER41B LTR ERV1 -136 499 1 2585 126 28 87 chr18 21550328 21550533 -64438401 + LTR26B LTR ERV1 17 232 -299 1748 137 93 29 chr18 21550533 21550811 -64438123 + AluSx SINE Alu 1 296 -16 2585 126 28 87 chr18 21550811 21551151 -64437783 + LTR26B LTR ERV1 232 531 0 580 100 0 0 chr18 21551223 21551303 -64437631 - LTR3b LTR ERVK 0 500 421 2785 123 10 69 chr18 21551305 21551491 -64437443 - LTR3b LTR ERVK -11 489 293 2428 69 7 0 chr18 21551491 21551795 -64437139 + AluY SINE Alu 1 306 -5 2785 123 10 69 chr18 21551795 21552128 -64436806 - LTR3b LTR ERVK -207 293 1 288 245 112 31 chr18 21552131 21552229 -64436705 + MIR SINE MIR 79 184 -78 237 234 0 0 chr18 21552279 21552343 -64436591 + GA-rich Low_complexity Low_complexity 2 65 0 2403 90 0 3 chr18 21552396 21552706 -64436228 + AluY SINE Alu 1 309 -2 2649 218 51 7 chr18 21552812 21553519 -64435415 - L1M4 LINE L1 -1559 4587 3850 3975 184 11 15 chr18 21553523 21554239 -64434695 - MER44D DNA MER2_type 0 605 21 435 247 0 0 chr18 21554270 21554367 -64434567 - L1M4 LINE L1 -2296 3850 3754 639 248 113 55 chr18 21554412 21554650 -64434284 + MLT1E LTR MaLR 1 252 -341 344 172 0 0 chr18 21554657 21554721 -64434213 + L1 LINE L1 4265 4328 -1818 1344 56 6 0 chr18 21554721 21554882 -64434052 + AluSx SINE Alu 1 162 -150 1618 238 18 3 chr18 21554898 21555226 -64433708 + MLT1E LTR MaLR 259 591 -2 3526 224 122 29 chr18 21555530 21556929 -64432005 - L1M4 LINE L1 -2346 3800 2271 1416 196 4 22 chr18 21556933 21557203 -64431731 - AluJo SINE Alu -1 311 47 5668 78 50 1 chr18 21557973 21558769 -64430165 + L1PA10 LINE L1 5324 6158 -10 2208 89 0 4 chr18 21558783 21559064 -64429870 + AluSg SINE Alu 1 280 -30 29 0 0 0 chr18 21559064 21559093 -64429841 + AT_rich Low_complexity Low_complexity 1 29 0 510 230 103 8 chr18 21559601 21559727 -64429207 - MER45A DNA AcHobo -1 177 40 340 239 130 0 chr18 21560216 21560308 -64428626 - MIR SINE MIR -3 259 156 465 256 17 8 chr18 21560387 21560504 -64428430 - LTR33 LTR ERVL -35 486 369 788 266 82 47 chr18 21560550 21560721 -64428213 - LTR33 LTR ERVL -256 265 81 955 203 33 0 chr18 21560721 21560903 -64428031 - MER5A DNA MER1_type -1 188 1 788 266 82 47 chr18 21560903 21560987 -64427947 - LTR33 LTR ERVL -440 81 1 1990 108 150 24 chr18 21561488 21561868 -64427066 - MSTA LTR MaLR 0 428 1 25 31 0 0 chr18 21562344 21562376 -64426558 + AT_rich Low_complexity Low_complexity 1 32 0 2107 129 0 10 chr18 21562587 21562898 -64426036 - AluSx SINE Alu -3 309 2 21 0 0 0 chr18 21563656 21563677 -64425257 + AT_rich Low_complexity Low_complexity 1 21 0 1352 174 116 18 chr18 21563870 21564146 -64424788 + AluJo SINE Alu 1 303 -9 562 240 0 23 chr18 21564187 21564316 -64424618 - MER94 DNA DNA -3 131 6 1649 165 30 8 chr18 21564317 21564583 -64424351 + AluJb SINE Alu 1 272 -40 2313 97 3 7 chr18 21564613 21564922 -64424012 + AluSc SINE Alu 1 308 -1 180 337 41 51 chr18 21565378 21565476 -64423458 + MIR SINE MIR 20 116 -92 182 204 114 0 chr18 21565592 21565636 -64423298 - L2 LINE L2 -292 2980 2932 312 271 9 56 chr18 21565771 21565878 -64423056 + MIR SINE MIR 91 192 -70 23 0 0 29 chr18 21566262 21566274 -64422660 + AT_rich Low_complexity Low_complexity 1 12 -21 1803 165 0 7 chr18 21566274 21566565 -64422369 + AluJb SINE Alu 1 289 -23 23 0 0 29 chr18 21566565 21566586 -64422348 + AT_rich Low_complexity Low_complexity 12 33 0 392 338 84 25 chr18 21567620 21567940 -64420994 + LTR16C LTR ERVL 151 489 -2 356 236 81 57 chr18 21568194 21568317 -64420617 - MER5A DNA MER1_type -63 126 1 1162 199 135 26 chr18 21568731 21568998 -64419936 - AluJo SINE Alu -6 296 1 23 54 0 0 chr18 21569150 21569187 -64419747 + AT_rich Low_complexity Low_complexity 1 37 0 1948 155 17 0 chr18 21569187 21569484 -64419450 + AluSx SINE Alu 1 302 -10 265 172 0 24 chr18 21570169 21570362 -64418572 + AluJo SINE Alu 44 300 -2 1871 186 3 22 chr18 21570448 21570803 -64418131 + MER7A DNA MER2_type 1 346 0 2320 91 3 0 chr18 21571024 21571320 -64417614 - AluSg SINE Alu -13 297 1 603 254 89 38 chr18 21571503 21571739 -64417195 - MIR SINE MIR -7 255 8 275 317 72 60 chr18 21572567 21572734 -64416200 + MIR3 SINE MIR 34 202 -6 369 62 0 0 chr18 21573887 21573935 -64414999 + (TTTTA)n Simple_repeat Simple_repeat 2 49 0 1943 112 18 4 chr18 21573938 21574216 -64414718 - AluSp SINE Alu -31 282 1 24 32 0 0 chr18 21575714 21575745 -64413189 + AT_rich Low_complexity Low_complexity 1 31 0 243 0 0 0 chr18 21576902 21576929 -64412005 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 539 286 115 17 chr18 21577519 21577753 -64411181 - MIR SINE MIR -1 261 5 1638 158 60 11 chr18 21578835 21579120 -64409814 + AluJo SINE Alu 1 299 -13 1392 180 62 18 chr18 21579173 21579445 -64409489 + AluJo SINE Alu 6 289 -23 1803 201 64 29 chr18 21580037 21580446 -64408488 - MER21B LTR ERV1 -53 810 388 434 319 111 27 chr18 21580458 21580744 -64408190 - L2 LINE L2 -279 3034 2720 348 292 45 55 chr18 21580783 21580985 -64407949 - L2 LINE L2 -1078 2236 2037 202 271 0 0 chr18 21581002 21581050 -64407884 + MIR SINE MIR 150 197 -65 389 252 252 28 chr18 21581527 21581741 -64407193 - LTR16B LTR ERVL 0 464 203 28 0 0 0 chr18 21582262 21582290 -64406644 + AT_rich Low_complexity Low_complexity 1 28 0 2302 103 62 14 chr18 21582293 21582651 -64406283 - THE1C LTR MaLR 0 375 1 4425 103 7 5 chr18 21582651 21583263 -64405671 - THE1C-int LTR MaLR 0 1580 968 1439 100 36 18 chr18 21583264 21583484 -64405450 - THE1C LTR MaLR -80 295 72 411 234 0 0 chr18 21583483 21583560 -64405374 - AluJ/FLAM SINE Alu -225 77 1 * 265 298 87 19 chr18 21583991 21584095 -64404839 - MIR SINE MIR -77 185 75 2240 80 0 10 chr18 21584113 21584413 -64404521 - AluY SINE Alu -14 297 1 1604 184 10 16 chr18 21584861 21585170 -64403764 - AluJo SINE Alu -5 307 1 25 51 0 0 chr18 21585347 21585386 -64403548 + AT_rich Low_complexity Low_complexity 1 39 0 209 412 72 0 chr18 21585687 21585784 -64403150 + L2 LINE L2 3010 3113 -159 213 39 0 0 chr18 21585819 21585845 -64403089 + (T)n Simple_repeat Simple_repeat 1 26 0 2419 63 3 3 chr18 21586579 21586879 -64402055 - AluY SINE Alu -11 300 1 2066 119 3 3 chr18 21587009 21587303 -64401631 - AluSg SINE Alu -16 294 1 195 311 0 16 chr18 21587329 21587390 -64401544 - L2 LINE L2 0 3313 3254 205 393 50 0 chr18 21588397 21588537 -64400397 + L2 LINE L2 2310 2456 -858 984 173 6 0 chr18 21588884 21589052 -64399882 + MER2 DNA MER2_type 2 170 -175 249 183 52 124 chr18 21589599 21589752 -64399182 - L1M4 LINE L1 -786 5360 5219 2272 101 0 3 chr18 21590570 21590877 -64398057 - AluSg SINE Alu -4 306 1 216 0 0 0 chr18 21592756 21592780 -64396154 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1729 144 15 0 chr18 21592787 21593051 -64395883 - AluSx SINE Alu -44 268 1 39 60 0 0 chr18 21593719 21593786 -64395148 + AT_rich Low_complexity Low_complexity 1 67 0 495 326 88 9 chr18 21593966 21594181 -64394753 - MIR SINE MIR -30 232 1 201 296 0 0 chr18 21594200 21594244 -64394690 - L3 LINE CR1 -508 1069 1026 936 228 119 39 chr18 21594684 21594996 -64393938 + MER46C DNA MER2_type 1 337 -1 225 0 0 0 chr18 21595490 21595515 -64393419 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 834 300 139 52 chr18 21595861 21596358 -64392576 - L3 LINE CR1 -19 1558 1019 1201 112 70 0 chr18 21597062 21597276 -64391658 + L1MA7 LINE L1 6063 6291 0 1964 132 17 7 chr18 21597279 21597575 -64391359 + AluSx SINE Alu 1 299 -13 231 0 0 71 chr18 21597584 21597626 -64391308 + (TTTTA)n Simple_repeat Simple_repeat 3 41 0 26 0 0 0 chr18 21597626 21597652 -64391282 + AT_rich Low_complexity Low_complexity 1 26 0 1070 259 96 68 chr18 21598117 21598257 -64390677 - L2 LINE L2 -4 3309 3174 2111 124 0 0 chr18 21598257 21598548 -64390386 + AluSx SINE Alu 1 291 -21 1070 259 96 68 chr18 21598548 21599001 -64389933 - L2 LINE L2 -139 3174 2702 1189 141 0 9 chr18 21599008 21599213 -64389721 - AluJo/FRAM SINE Alu -12 300 129 296 119 0 0 chr18 21599210 21599252 -64389682 - Alu SINE Alu -249 53 12 * 2512 59 7 0 chr18 21599259 21599563 -64389371 - AluY SINE Alu -5 306 1 273 315 27 0 chr18 21599563 21599636 -64389298 - L2 LINE L2 -599 2715 2641 429 275 228 14 chr18 21599677 21599888 -64389046 + MIR SINE MIR 6 261 -1 513 322 53 29 chr18 21601026 21601234 -64387700 - MIR SINE MIR -29 233 21 2157 106 0 0 chr18 21602093 21602398 -64386536 + AluY SINE Alu 1 305 0 817 207 0 7 chr18 21602692 21602842 -64386092 - FRAM SINE Alu -27 149 1 29 28 0 0 chr18 21603084 21603120 -64385814 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr18 21603471 21603500 -64385434 + AT_rich Low_complexity Low_complexity 1 29 0 1022 232 287 11 chr18 21603524 21603890 -64385044 - L2 LINE L2 0 3313 2847 * 1023 236 46 46 chr18 21603885 21604212 -64384722 - L2 LINE L2 -868 2446 2120 384 222 25 88 chr18 21604225 21604465 -64384469 - MER106B DNA MER1_type -3 1056 4 784 186 103 21 chr18 21604465 21604659 -64384275 - L2 LINE L2 -1210 2104 1895 392 214 169 0 chr18 21605497 21605586 -64383348 + L2 LINE L2 3196 3299 -14 198 0 0 0 chr18 21606491 21606513 -64382421 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1451 197 21 45 chr18 21606516 21606805 -64382129 - AluJo SINE Alu -30 282 1 395 260 281 7 chr18 21607039 21607185 -64381749 + MER5A DNA MER1_type 4 189 0 1873 153 38 52 chr18 21607363 21607763 -64381171 - L1MB5 LINE L1 -8 6166 5773 931 214 64 67 chr18 21608292 21608637 -64380297 + MER2 DNA MER2_type 1 344 0 393 288 41 55 chr18 21608780 21608926 -64380008 - MIR SINE MIR -64 144 1 1973 114 71 0 chr18 21609050 21609331 -64379603 - AluSx SINE Alu -10 302 2 2080 53 21 25 chr18 21610875 21611157 -64377777 - AluY SINE Alu -30 281 1 1789 154 0 11 chr18 21611295 21611604 -64377330 - AluJb SINE Alu 0 306 1 236 250 30 30 chr18 21611820 21611920 -64377014 - L1MEc LINE L1 -4303 2093 1994 3899 156 93 5 chr18 21611998 21612867 -64376067 - L1MB8 LINE L1 -2 6176 5219 1770 167 0 11 chr18 21613295 21613582 -64375352 + AluJo SINE Alu 4 287 -25 26 50 0 0 chr18 21614156 21614196 -64374738 + AT_rich Low_complexity Low_complexity 1 40 0 876 214 16 5 chr18 21614549 21614736 -64374198 + MER58A DNA MER1_type 36 224 0 182 159 63 63 chr18 21615636 21615699 -64373235 + L3 LINE CR1 1232 1294 -283 652 268 112 33 chr18 21615755 21616231 -64372703 - MLT1G1 LTR MaLR -13 529 15 193 279 139 0 chr18 21616328 21616414 -64372520 - L2 LINE L2 -8 3305 3208 182 143 0 0 chr18 21616502 21616530 -64372404 + L2 LINE L2 3213 3240 -32 406 277 153 21 chr18 21616583 21616818 -64372116 - L2 LINE L2 -10 3303 3038 2087 125 7 0 chr18 21617036 21617331 -64371603 + AluSx SINE Alu 1 297 -15 757 136 0 0 chr18 21617896 21618014 -64370920 - L1PA14 LINE L1 -9 6152 6035 416 268 29 7 chr18 21618447 21618585 -64370349 - L1MD3 LINE L1 -18 7977 7837 1557 154 65 29 chr18 21618708 21618987 -64369947 + AluJb SINE Alu 1 289 -23 21 0 0 0 chr18 21618987 21619008 -64369926 + AT_rich Low_complexity Low_complexity 1 21 0 185 358 15 0 chr18 21619746 21619813 -64369121 + L2 LINE L2 2227 2294 -1020 336 311 25 42 chr18 21620027 21620146 -64368788 + L2 LINE L2 3119 3235 -37 3814 133 31 76 chr18 21620325 21620394 -64368540 + L1MA5 LINE L1 5538 5609 -691 2029 72 8 4 chr18 21620394 21620657 -64368277 + AluY SINE Alu 45 308 -3 3814 133 31 76 chr18 21620657 21621132 -64367802 + L1MA5 LINE L1 5609 6104 -196 1446 225 3 19 chr18 21621132 21621448 -64367486 + 7SLRNA srpRNA srpRNA 1 311 -9 2240 108 0 3 chr18 21621454 21621759 -64367175 + AluY SINE Alu 1 304 -7 3814 133 31 76 chr18 21621759 21621982 -64366952 + L1MA5 LINE L1 6109 6278 -22 2110 118 7 0 chr18 21621989 21622285 -64366649 - AluSx SINE Alu -14 298 1 2298 85 10 0 chr18 21622483 21622778 -64366156 - AluSx SINE Alu -14 298 1 2336 88 0 0 chr18 21622970 21623266 -64365668 + AluY SINE Alu 1 296 -15 1940 175 0 0 chr18 21623558 21623867 -64365067 - AluJb SINE Alu -3 309 1 237 65 0 0 chr18 21624051 21624082 -64364852 + (TG)n Simple_repeat Simple_repeat 2 32 0 2277 99 3 0 chr18 21624083 21624386 -64364548 - AluSq SINE Alu -9 304 1 565 185 97 26 chr18 21624488 21624715 -64364219 + AluSc SINE Alu 1 243 -66 1696 176 0 41 chr18 21625020 21625339 -64363595 - AluJo SINE Alu -6 306 1 2549 166 18 66 chr18 21625603 21626047 -64362887 - L1 LINE L1 -997 5149 4685 1573 153 31 4 chr18 21626047 21626302 -64362632 - AluSx SINE Alu 0 312 51 2549 166 18 66 chr18 21626302 21626406 -64362528 - L1 LINE L1 -1461 4685 4632 2089 121 7 0 chr18 21626406 21626696 -64362238 + AluSx SINE Alu 3 294 -18 2549 166 18 66 chr18 21626696 21626767 -64362167 - L1 LINE L1 -1514 4632 4559 2208 120 0 0 chr18 21627214 21627513 -64361421 + AluSq SINE Alu 1 299 -14 2377 58 7 10 chr18 21627514 21627808 -64361126 + AluY SINE Alu 2 294 -17 2208 123 3 0 chr18 21627880 21628182 -64360752 - AluSx SINE Alu -3 309 7 1085 135 6 34 chr18 21628190 21628368 -64360566 - AluSp SINE Alu -9 304 132 481 157 12 0 chr18 21628470 21628553 -64360381 - L1MC1 LINE L1 -9 6324 6241 616 288 67 67 chr18 21628565 21628832 -64360102 + L2 LINE L2 2645 2911 -403 280 298 70 53 chr18 21629037 21629151 -64359783 + MIR3 SINE MIR 45 160 -48 1976 122 3 21 chr18 21629162 21629450 -64359484 + AluSx SINE Alu 11 293 -19 25 0 0 0 chr18 21630315 21630340 -64358594 + AT_rich Low_complexity Low_complexity 1 25 0 2287 114 0 3 chr18 21630343 21630651 -64358283 + AluSx SINE Alu 1 307 -5 249 92 15 31 chr18 21630657 21630722 -64358212 + (TAAAA)n Simple_repeat Simple_repeat 1 64 0 695 255 61 18 chr18 21630959 21631237 -64357697 - AluJo SINE Alu -11 291 2 413 174 0 0 chr18 21631412 21631481 -64357453 - AluJ/FLAM SINE Alu -243 69 1 2110 117 0 38 chr18 21632153 21632470 -64356464 - AluSx SINE Alu -7 305 1 272 229 0 0 chr18 21632682 21632743 -64356191 + L1MA10 LINE L1 6274 6334 0 514 171 57 9 chr18 21632882 21632987 -64355947 + HY1 scRNA scRNA 2 111 -1 1868 138 0 24 chr18 21633250 21633546 -64355388 + AluJb SINE Alu 1 289 -23 641 274 46 10 chr18 21634025 21634222 -64354712 + MIR SINE MIR 2 205 -57 220 256 77 51 chr18 21634244 21634322 -64354612 - MIR SINE MIR -120 142 63 2397 89 3 0 chr18 21635141 21635445 -64353489 - AluSc SINE Alu -4 305 1 307 271 52 10 chr18 21636124 21636220 -64352714 - MIR SINE MIR 0 262 163 504 313 135 40 chr18 21636240 21636647 -64352287 - MLT1J LTR MaLR -18 593 153 1963 146 7 10 chr18 21636992 21637287 -64351647 + AluSx SINE Alu 1 294 -18 189 363 33 0 chr18 21639603 21639694 -64349240 - L2 LINE L2 0 3313 3220 414 256 135 26 chr18 21639876 21640032 -64348902 - MER5A DNA MER1_type -1 188 16 280 313 0 0 chr18 21640110 21640177 -64348757 + L2 LINE L2 3234 3300 -13 753 248 55 46 chr18 21640508 21640637 -64348297 - MER58A DNA MER1_type -2199 221 88 4003 180 89 19 chr18 21640637 21641443 -64347491 + MER21B LTR ERV1 1 863 0 753 248 55 46 chr18 21641443 21641531 -64347403 - MER58A DNA MER1_type -2332 88 2 488 287 118 38 chr18 21641571 21641808 -64347126 + MIR SINE MIR 1 256 -6 485 290 107 72 chr18 21641818 21642332 -64346602 + HAL1 LINE L1 6 537 -1970 1906 192 79 46 chr18 21642347 21642826 -64346108 - MLT1D LTR MaLR -8 497 3 291 341 37 52 chr18 21642826 21642961 -64345973 + HAL1 LINE L1 538 670 -1837 931 212 9 77 chr18 21642998 21643220 -64345714 + MER20 DNA MER1_type 12 218 -1 439 236 26 47 chr18 21643277 21643510 -64345424 + HAL1 LINE L1 865 1092 -1415 6906 206 130 87 chr18 21643545 21645695 -64343239 + L1M4 LINE L1 2181 4237 -1909 720 229 0 0 chr18 21645695 21645835 -64343099 + AluJb SINE Alu 134 273 -39 6906 206 130 87 chr18 21645835 21645989 -64342945 + L1M4 LINE L1 4237 4383 -1763 759 179 238 0 chr18 21645989 21646157 -64342777 + MER63A DNA MER1_type 2 209 -1 6906 206 130 87 chr18 21646157 21646666 -64342268 + L1M4 LINE L1 4383 5261 -885 1062 162 11 0 chr18 21646666 21646845 -64342089 + AluJb SINE Alu 121 301 -11 302 233 41 0 chr18 21646877 21646897 -64342037 + AluSp SINE Alu 113 135 -168 2111 125 3 0 chr18 21646897 21647194 -64341740 + AluSq SINE Alu 1 298 -15 21 36 0 0 chr18 21647609 21647637 -64341297 + AT_rich Low_complexity Low_complexity 1 28 0 200 203 14 29 chr18 21647939 21648008 -64340926 + A-rich Low_complexity Low_complexity 6 73 0 579 184 9 18 chr18 21648107 21648221 -64340713 + FLAM_C SINE Alu 21 133 -10 22 35 0 0 chr18 21648375 21648404 -64340530 + AT_rich Low_complexity Low_complexity 1 29 0 2161 102 0 30 chr18 21648588 21648892 -64340042 - AluSg SINE Alu -15 295 1 250 236 137 47 chr18 21648993 21649035 -64339899 - MIR SINE MIR 0 262 225 1969 141 21 0 chr18 21649035 21649319 -64339615 - AluSx SINE Alu -22 290 1 250 236 137 47 chr18 21649319 21649337 -64339597 - MIR SINE MIR -37 225 210 2028 125 68 37 chr18 21649337 21649690 -64339244 + THE1B LTR MaLR 1 364 0 250 236 137 47 chr18 21649690 21649813 -64339121 - MIR SINE MIR -52 210 2 1495 133 13 144 chr18 21651091 21651357 -64337577 - MLT1B LTR MaLR -61 329 124 401 190 20 10 chr18 21651357 21651457 -64337477 + U13 snRNA snRNA 2 102 -2 1495 133 13 144 chr18 21651457 21651565 -64337369 - MLT1B LTR MaLR -266 124 4 1630 185 13 7 chr18 21652617 21652915 -64336019 - AluJo SINE Alu 0 312 13 28 79 0 0 chr18 21652972 21653035 -64335899 + AT_rich Low_complexity Low_complexity 1 63 0 629 296 104 17 chr18 21653819 21654049 -64334885 + MIR SINE MIR 2 251 -11 1242 143 73 77 chr18 21654186 21654486 -64334448 + L1MA8 LINE L1 5988 6286 -5 231 88 0 0 chr18 21655132 21655166 -64333768 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 398 291 125 6 chr18 21655207 21655591 -64333343 - Charlie7 DNA MER1_type -1969 643 193 433 188 24 12 chr18 21656044 21656129 -64332805 + MLT1G1 LTR MaLR 6 91 -504 2916 210 70 58 chr18 21656130 21656383 -64332551 + L1MD1 LINE L1 5351 5599 -643 1568 123 17 4 chr18 21656383 21656619 -64332315 + AluSg/x SINE Alu 74 312 0 2916 210 70 58 chr18 21656619 21657235 -64331699 + L1MD1 LINE L1 5599 6231 -11 230 219 16 0 chr18 21657253 21657317 -64331617 + L1MD3 LINE L1 7921 7985 -10 554 154 31 0 chr18 21657423 21657553 -64331381 - L1ME LINE L1 -3215 2865 2732 761 94 51 0 chr18 21657579 21657696 -64331238 - L1PA7 LINE L1 0 6154 6032 5332 66 7 21 chr18 21657797 21658830 -64330104 - L1P2 LINE L1 -508 5646 4637 1081 248 69 51 chr18 21658836 21659136 -64329798 - L1ME LINE L1 -3389 2691 2377 1546 195 50 3 chr18 21659136 21659418 -64329516 - AluJo SINE Alu -15 297 3 1081 248 69 51 chr18 21659418 21659609 -64329325 - L1ME LINE L1 -3703 2377 2191 587 229 6 12 chr18 21659611 21659777 -64329157 - L1ME LINE L1 -5065 1005 841 3855 173 64 3 chr18 21659781 21660549 -64328385 - L1MB7 LINE L1 -5 6179 5365 1269 207 59 8 chr18 21660610 21661056 -64327878 - MLT1E3 LTR MaLR -116 508 1 42427 54 3 0 chr18 21661179 21667303 -64321631 - L1PA5 LINE L1 -5 6149 11 257 248 109 50 chr18 21667927 21668065 -64320869 - MIR SINE MIR -67 141 37 1693 217 52 19 chr18 21670682 21670881 -64318053 - L1ME1 LINE L1 -5 6161 5970 1573 155 11 26 chr18 21670881 21671145 -64317789 - AluJo SINE Alu -10 302 43 1693 217 52 19 chr18 21671145 21671369 -64317565 - L1ME1 LINE L1 -196 5970 5724 666 283 110 35 chr18 21671373 21671691 -64317243 - L2 LINE L2 -5 3308 2967 2926 199 25 12 chr18 21672528 21673176 -64315758 - L1MC3 LINE L1 -733 7052 6397 1453 230 64 108 chr18 21673360 21673711 -64315223 - L1MC5 LINE L1 -54 7907 7542 2042 181 73 35 chr18 21673711 21674192 -64314742 + MLT1D LTR MaLR 3 501 -4 1453 230 64 108 chr18 21674192 21674942 -64313992 - L1MC5 LINE L1 -419 7542 6874 794 241 46 0 chr18 21675089 21675305 -64313629 - L1MC5 LINE L1 -1860 5948 5723 426 281 0 72 chr18 21675685 21675824 -64313110 - HERV16 LTR ERVL -3881 1115 987 672 284 0 12 chr18 21675857 21676026 -64312908 + HERV16 LTR ERVL 1255 1421 -3575 343 246 109 34 chr18 21676036 21676157 -64312777 + L1MC4a LINE L1 5707 5846 -1962 3325 141 60 22 chr18 21676157 21676270 -64312664 - MER6A DNA MER2_type -260 605 498 2612 53 0 0 chr18 21676270 21676574 -64312360 - AluY SINE Alu -7 304 1 3325 141 60 22 chr18 21676574 21677043 -64311891 - MER6A DNA MER2_type -367 498 1 343 246 109 34 chr18 21677043 21677096 -64311838 + L1MC4a LINE L1 5846 5894 -1914 1772 140 61 17 chr18 21677099 21677392 -64311542 + AluJb SINE Alu 1 306 -6 1975 154 0 3 chr18 21678088 21678381 -64310553 - AluSx SINE Alu -20 292 1 2032 129 0 0 chr18 21678667 21678953 -64309981 + AluSx SINE Alu 13 298 -14 733 148 7 63 chr18 21729298 21729440 -64259494 + AluJo SINE Alu 1 134 -178 1338 187 57 33 chr18 21729466 21729765 -64259169 + AluJo SINE Alu 1 306 -6 408 272 67 48 chr18 21729826 21730007 -64258927 + MIR3 SINE MIR 7 190 -18 749 147 107 60 chr18 21731398 21731548 -64257386 + AluJo SINE Alu 138 294 -8 2175 96 0 0 chr18 21731677 21731978 -64256956 - AluSx SINE Alu -11 301 1 21 0 0 0 chr18 21732284 21732305 -64256629 + AT_rich Low_complexity Low_complexity 1 21 0 1787 153 3 7 chr18 21736461 21736755 -64252179 + AluJb SINE Alu 1 293 -19 2027 200 53 22 chr18 21736931 21737420 -64251514 + MLT1D LTR MaLR 2 505 0 2773 177 55 50 chr18 21737695 21738355 -64250579 + L1MB4 LINE L1 5516 6178 -2 287 178 0 0 chr18 21738530 21738575 -64250359 + L2 LINE L2 3223 3267 -5 2242 71 0 10 chr18 21738753 21739047 -64249887 - AluY SINE Alu -20 291 1 446 343 144 56 chr18 21739059 21739863 -64249071 + L3 LINE CR1 208 1082 -495 734 186 109 0 chr18 21739939 21740095 -64248839 + L1MB4 LINE L1 5849 6021 -159 237 249 55 101 chr18 21740277 21740529 -64248405 - L2 LINE L2 -210 3103 2863 207 0 0 0 chr18 21740529 21740552 -64248382 + (GGAA)n Simple_repeat Simple_repeat 4 26 0 2488 54 7 7 chr18 21741189 21741486 -64247448 + AluY SINE Alu 1 297 -14 313 185 0 0 chr18 21743027 21743081 -64245853 - THE1B LTR MaLR 0 364 311 2037 116 51 37 chr18 21743101 21743456 -64245478 - THE1B LTR MaLR -3 361 2 2294 112 0 19 chr18 21743667 21743979 -64244955 - AluSx SINE Alu -6 306 1 1013 147 6 0 chr18 21744032 21744189 -64244745 + MLT1C LTR MaLR 22 179 -288 812 185 0 32 chr18 21744189 21744346 -64244588 + FRAM SINE Alu 1 146 -30 998 205 145 4 chr18 21744353 21744587 -64244347 + MLT1C LTR MaLR 174 440 -27 1907 158 17 3 chr18 21745303 21745595 -64243339 - AluJo SINE Alu -15 297 2 449 333 114 50 chr18 21745836 21746178 -64242756 + L2 LINE L2 2896 3259 -13 1022 245 76 25 chr18 21747173 21747528 -64241406 - MLT1C LTR MaLR -9 458 86 940 202 27 11 chr18 21747541 21747724 -64241210 + Tigger7 DNA MER2_type 45 230 -2257 634 168 0 0 chr18 21747737 21747838 -64241096 + Tigger7 DNA MER2_type 2386 2486 -5 363 202 36 0 chr18 21747843 21747927 -64241007 - MLT1C LTR MaLR -380 87 1 185 302 94 0 chr18 21750248 21750301 -64238633 + MIR SINE MIR 203 260 -2 615 300 53 0 chr18 21750730 21750957 -64237977 - MIR SINE MIR -11 251 13 244 279 99 27 chr18 21751284 21751395 -64237539 - L2 LINE L2 -220 3052 2934 189 288 189 38 chr18 21754089 21754221 -64234713 - L2 LINE L2 -2 3311 3160 2642 58 0 3 chr18 21754228 21754539 -64234395 - AluY SINE Alu -1 310 1 218 307 119 0 chr18 21755084 21755185 -64233749 + MIR SINE MIR 104 216 -46 188 208 42 21 chr18 21755500 21755548 -64233386 - MIR SINE MIR -106 156 108 2125 153 0 3 chr18 21755555 21755868 -64233066 - AluJo SINE Alu 0 312 1 21 36 0 0 chr18 21756089 21756117 -64232817 + AT_rich Low_complexity Low_complexity 1 28 0 206 279 28 45 chr18 21756896 21757075 -64231859 + (CCCTG)n Simple_repeat Simple_repeat 4 179 0 210 256 93 35 chr18 21757627 21757713 -64231221 - L2 LINE L2 -25 3288 3198 300 281 22 11 chr18 21758132 21758221 -64230713 + MIR3 SINE MIR 87 176 -32 473 226 115 51 chr18 21758756 21758973 -64229961 - MIR SINE MIR 0 262 32 210 37 0 0 chr18 21761002 21761029 -64227905 + (TC)n Simple_repeat Simple_repeat 2 28 0 320 186 0 93 chr18 21761029 21761126 -64227808 + L1MC4 LINE L1 6559 6703 -1139 2387 86 3 3 chr18 21761783 21762085 -64226849 + AluSg SINE Alu 1 302 -8 2489 78 0 3 chr18 21763047 21763354 -64225580 - AluY SINE Alu -5 306 1 2186 121 7 0 chr18 21763354 21763652 -64225282 - AluJb SINE Alu -12 300 1 387 273 52 7 chr18 21763796 21763950 -64224984 - L1ME4a LINE L1 -19 6102 5942 2385 108 0 0 chr18 21764607 21764904 -64224030 + AluSg SINE Alu 1 297 -13 23 33 0 0 chr18 21767229 21767259 -64221675 + AT_rich Low_complexity Low_complexity 1 30 0 2324 83 3 17 chr18 21767616 21767918 -64221016 + AluSq SINE Alu 1 298 -15 2568 60 3 0 chr18 21768577 21768876 -64220058 + AluY SINE Alu 1 300 -11 831 202 79 0 chr18 21769734 21769912 -64219022 - MER3 DNA MER1_type -17 192 1 568 293 73 0 chr18 21771613 21771777 -64217157 + MER5B DNA MER1_type 3 178 0 392 272 154 18 chr18 21771882 21772051 -64216883 + MIR SINE MIR 65 256 -6 815 229 0 0 chr18 21772053 21772197 -64216737 + FRAM SINE Alu 1 144 -32 2418 99 0 3 chr18 21772421 21772734 -64216200 + AluSq SINE Alu 1 312 -1 946 280 72 0 chr18 21773987 21774291 -64214643 - MER46C DNA MER2_type -12 326 1 189 307 107 36 chr18 21778128 21778268 -64210666 - L2 LINE L2 0 3313 3164 2217 133 0 0 chr18 21778322 21778622 -64210312 + AluSx SINE Alu 1 300 -12 180 270 48 0 chr18 21778673 21778736 -64210198 - L2 LINE L2 -219 3053 2988 227 167 0 0 chr18 21779477 21779513 -64209421 - MER3 DNA MER1_type -159 50 15 1272 233 90 11 chr18 21779537 21779725 -64209209 - L1ME2 LINE L1 -169 5995 5823 2091 117 10 32 chr18 21779725 21780034 -64208900 + AluSq SINE Alu 1 302 -11 1272 233 90 11 chr18 21780034 21780210 -64208724 - L1ME2 LINE L1 -341 5823 5602 2227 119 0 7 chr18 21780480 21780775 -64208159 + AluSq SINE Alu 1 293 -20 273 179 62 9 chr18 21781482 21781594 -64207340 + (TA)n Simple_repeat Simple_repeat 2 119 0 249 172 0 69 chr18 21781688 21781746 -64207188 - MER69 DNA AcHobo -12 2514 2461 189 0 0 0 chr18 21781955 21781976 -64206958 + (T)n Simple_repeat Simple_repeat 1 21 0 2340 86 7 3 chr18 21782086 21782377 -64206557 + AluSq SINE Alu 10 301 -12 2011 115 30 17 chr18 21783712 21784007 -64204927 + AluSx SINE Alu 1 299 -13 2285 91 7 10 chr18 21784472 21784769 -64204165 + AluSc SINE Alu 1 296 -13 2562 69 0 0 chr18 21784872 21785177 -64203757 - AluY SINE Alu -6 305 1 2151 133 7 3 chr18 21785179 21785479 -64203455 - AluSx SINE Alu -11 301 1 340 306 16 0 chr18 21786089 21786210 -64202724 - MIR SINE MIR -127 135 13 428 246 18 0 chr18 21786890 21787000 -64201934 + FLAM_A SINE Alu 5 116 -26 225 0 0 0 chr18 21787000 21787025 -64201909 + (T)n Simple_repeat Simple_repeat 1 25 0 2241 117 10 0 chr18 21787032 21787331 -64201603 + AluSq SINE Alu 1 302 -11 321 304 36 18 chr18 21787933 21788045 -64200889 - MER5A DNA MER1_type -14 175 62 182 279 22 110 chr18 21788068 21788204 -64200730 - MIR SINE MIR -46 216 93 2160 125 7 0 chr18 21789657 21789953 -64198981 + AluSx SINE Alu 1 298 -14 1822 159 67 33 chr18 21790203 21790290 -64198644 + L1MB3 LINE L1 5782 5865 -318 2388 91 3 0 chr18 21790290 21790587 -64198347 + AluSq SINE Alu 1 298 -15 1822 159 67 33 chr18 21790587 21790888 -64198046 + L1MB3 LINE L1 5865 6183 0 530 305 92 29 chr18 21790895 21791134 -64197800 - MIR SINE MIR 0 262 9 2372 108 0 0 chr18 21791687 21791992 -64196942 + AluSx SINE Alu 1 305 -7 383 165 85 20 chr18 21792922 21793029 -64195905 - MER74B LTR ERVL 0 591 452 1468 198 55 15 chr18 21793045 21793388 -64195546 - MLT1A2 LTR MaLR -17 357 1 * 1944 176 103 2 chr18 21793388 21793795 -64195139 - MER74A LTR ERVL -106 452 5 2083 152 0 3 chr18 21794044 21794347 -64194587 - AluJo SINE Alu -10 302 1 25 0 0 0 chr18 21794376 21794401 -64194533 + AT_rich Low_complexity Low_complexity 1 25 0 2138 114 3 13 chr18 21794957 21795263 -64193671 - AluSq SINE Alu -2 311 9 367 327 33 13 chr18 21795337 21795490 -64193444 + MIR SINE MIR 49 204 -58 949 193 0 23 chr18 21799639 21799815 -64189119 + AluJo SINE Alu 111 282 -30 1717 146 75 7 chr18 21799840 21800120 -64188814 + AluJb SINE Alu 1 299 -13 507 235 95 40 chr18 21800121 21800395 -64188539 - Tigger5 DNA MER2_type -84 2239 9 252 313 0 0 chr18 21800429 21800496 -64188438 + MER5A DNA MER1_type 9 75 -114 274 324 38 13 chr18 21801484 21801669 -64187265 - MIR SINE MIR -9 253 24 219 288 0 15 chr18 21802478 21802544 -64186390 + L2 LINE L2 3247 3311 -2 1952 155 94 42 chr18 21802617 21802840 -64186094 - MSTA LTR MaLR 0 428 218 2664 65 0 0 chr18 21802840 21803147 -64185787 - AluSg SINE Alu -3 307 1 1703 168 54 4 chr18 21803151 21803431 -64185503 - AluJb SINE Alu -18 294 1 1952 155 94 42 chr18 21803431 21803608 -64185326 - MSTA LTR MaLR -212 216 2 393 271 21 49 chr18 21803622 21803766 -64185168 + LTR33 LTR ERVL 74 213 -308 21 0 0 0 chr18 21804295 21804316 -64184618 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr18 21804457 21804479 -64184455 + AT_rich Low_complexity Low_complexity 1 22 0 218 227 0 0 chr18 21804805 21804849 -64184085 + L2 LINE L2 3251 3294 -19 422 280 107 30 chr18 21806872 21807040 -64181894 + MER5A DNA MER1_type 7 187 -2 309 51 0 0 chr18 21807273 21807312 -64181622 + (TG)n Simple_repeat Simple_repeat 2 40 0 198 291 62 84 chr18 21807517 21807624 -64181310 + MIR SINE MIR 86 194 -68 2576 84 25 3 chr18 21807624 21807991 -64180943 + THE1C LTR MaLR 1 375 0 8925 120 66 10 chr18 21807991 21809487 -64179447 + THE1C-int LTR MaLR 1 1580 0 2238 150 6 11 chr18 21809487 21809853 -64179081 + THE1B LTR MaLR 1 364 0 198 291 62 84 chr18 21809853 21809922 -64179012 + MIR SINE MIR 191 260 -2 3347 168 50 61 chr18 21809975 21810697 -64178237 + MER21B LTR ERV1 1 714 -149 1078 119 0 0 chr18 21810804 21810947 -64177987 + FRAM SINE Alu 19 161 -15 592 274 195 3 chr18 21811179 21811497 -64177437 + MER110A LTR ERV1 36 414 -54 270 352 80 28 chr18 21811658 21812019 -64176915 - L2 LINE L2 -1663 1651 1272 243 0 0 0 chr18 21812096 21812123 -64176811 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 1827 178 0 10 chr18 21812419 21812723 -64176211 - AluJb SINE Alu -11 301 1 605 203 4 0 chr18 21813396 21813646 -64175288 + (TG)n Simple_repeat Simple_repeat 1 251 0 585 0 0 0 chr18 21814081 21814146 -64174788 + (CTGTG)n Simple_repeat Simple_repeat 4 68 0 1288 193 18 60 chr18 21814292 21814581 -64174353 + L1MB4 LINE L1 5858 6133 -47 2473 61 0 3 chr18 21814581 21814875 -64174059 - AluY SINE Alu -18 293 1 1288 193 18 60 chr18 21814875 21814916 -64174018 + L1MB4 LINE L1 6133 6174 -6 791 210 222 25 chr18 21815466 21815623 -64173311 - MLT1H LTR MaLR -13 536 411 2063 127 5 46 chr18 21815623 21815993 -64172941 + THE1A LTR MaLR 1 355 0 791 210 222 25 chr18 21815993 21816078 -64172856 - MLT1H LTR MaLR -138 411 246 759 203 112 59 chr18 21816082 21816405 -64172529 - MER31B LTR ERV1 0 466 1 666 243 151 10 chr18 21816407 21816613 -64172321 - MLT1H LTR MaLR -306 243 9 1867 153 6 31 chr18 21817212 21817532 -64171402 + AluJo SINE Alu 1 312 0 730 275 41 90 chr18 21817537 21817926 -64171008 - MLT1J LTR MaLR -92 419 50 1339 150 60 96 chr18 21817931 21818265 -64170669 + MLT1B LTR MaLR 16 337 -53 249 159 0 0 chr18 21818307 21818351 -64170583 + (CA)n Simple_repeat Simple_repeat 1 44 0 824 115 0 33 chr18 21818370 21818492 -64170442 - FLAM_C SINE Alu -15 118 1 408 152 0 0 chr18 21818492 21818558 -64170376 + MLT1B LTR MaLR 402 467 0 1400 143 25 90 chr18 21819503 21819803 -64169131 + L1MB7 LINE L1 5884 6163 -21 1799 183 6 19 chr18 21819803 21820114 -64168820 - AluJb SINE Alu -5 307 1 1400 143 25 90 chr18 21820114 21820135 -64168799 + L1MB7 LINE L1 6163 6184 0 843 186 124 11 chr18 21821401 21821578 -64167356 + MER4D LTR ERV1 1 197 -706 3211 140 14 39 chr18 21821578 21821692 -64167242 - MER41B LTR ERV1 0 635 520 1900 135 57 7 chr18 21821692 21821989 -64166945 + AluJb SINE Alu 1 312 0 3211 140 14 39 chr18 21821989 21822015 -64166919 - MER41B LTR ERV1 -115 520 495 2362 110 3 0 chr18 21822015 21822325 -64166609 + AluSx SINE Alu 1 311 -1 3211 140 14 39 chr18 21822325 21822769 -64166165 - MER41B LTR ERV1 -140 495 65 2543 145 9 9 chr18 21822773 21823215 -64165719 + MER4D LTR ERV1 461 902 -1 389 109 0 0 chr18 21823497 21823552 -64165382 + LTR7 LTR ERV1 1 55 -395 15623 92 11 21 chr18 21823557 21825949 -64162985 + HERVH LTR ERV1 439 2992 -4721 6070 80 3 2 chr18 21825935 21826788 -64162146 + HERVH LTR ERV1 3140 3993 -3720 * 1290 83 17 0 chr18 21826790 21826970 -64161964 + HERVH LTR ERV1 4488 4670 -3043 * 3604 147 2 7 chr18 21826967 21827545 -64161389 + HERVH LTR ERV1 4575 5149 -2564 1396 116 19 0 chr18 21827546 21827762 -64161172 + HERVH LTR ERV1 5600 5819 -1894 * 2202 106 50 13 chr18 21827760 21828138 -64160796 + HERVH LTR ERV1 7322 7713 0 2612 50 136 5 chr18 21828138 21828534 -64160400 + LTR7 LTR ERV1 1 448 -2 506 260 101 24 chr18 21829058 21829115 -64159819 + L2 LINE L2 3090 3141 -172 2084 121 0 36 chr18 21829115 21829422 -64159512 - AluSx SINE Alu -13 299 4 506 260 101 24 chr18 21829422 21829572 -64159362 + L2 LINE L2 3141 3313 0 1671 237 111 22 chr18 21829850 21830358 -64158576 - MLT1H1 LTR MaLR -8 547 2 321 314 191 27 chr18 21831130 21831350 -64157584 + MIR SINE MIR 7 262 0 2208 97 3 17 chr18 21831445 21831735 -64157199 + AluSq SINE Alu 1 286 -27 186 43 0 0 chr18 21831735 21831758 -64157176 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 1367 184 32 6 chr18 21831764 21832080 -64156854 - MER33 DNA MER1_type 0 324 1 1995 150 3 16 chr18 21832271 21832584 -64156350 - AluJb SINE Alu -3 309 1 1284 193 5 0 chr18 21833056 21833274 -64155660 + AluJb SINE Alu 92 310 -2 1292 89 75 28 chr18 21833657 21833871 -64155063 + L1PA10 LINE L1 5945 6168 0 24 0 0 0 chr18 21833972 21833996 -64154938 + AT_rich Low_complexity Low_complexity 1 24 0 1760 68 0 0 chr18 21834524 21834743 -64154191 + L1PA7 LINE L1 5936 6154 0 2132 128 7 7 chr18 21834790 21835095 -64153839 - AluSx SINE Alu -7 305 1 395 190 215 16 chr18 21835597 21835718 -64153216 + L1MA8 LINE L1 6147 6291 0 1616 163 36 23 chr18 21835727 21836028 -64152906 + AluJo SINE Alu 1 305 -7 23 33 0 0 chr18 21836028 21836058 -64152876 + AT_rich Low_complexity Low_complexity 1 30 0 210 355 174 0 chr18 21837605 21837760 -64151174 + MIR SINE MIR 20 201 -61 212 289 66 0 chr18 21840572 21840648 -64148286 - L2 LINE L2 -54 3218 3138 914 190 118 0 chr18 21840847 21841042 -64147892 + MER20 DNA MER1_type 1 218 -1 648 281 40 10 chr18 21841283 21841482 -64147452 - Charlie8 DNA MER1_type -2152 265 61 2313 111 0 3 chr18 21842123 21842429 -64146505 + AluSx SINE Alu 1 305 -7 811 144 0 15 chr18 21842440 21842572 -64146362 + AluJo/FLAM SINE Alu 3 132 -170 1761 75 0 31 chr18 21842572 21842799 -64146135 + AluY SINE Alu 80 299 -12 27 0 0 0 chr18 21842862 21842889 -64146045 + AT_rich Low_complexity Low_complexity 1 27 0 206 73 55 18 chr18 21842900 21842955 -64145979 + (TATAA)n Simple_repeat Simple_repeat 5 61 0 208 147 67 13 chr18 21842987 21843062 -64145872 + (TA)n Simple_repeat Simple_repeat 2 80 0 183 80 0 0 chr18 21843062 21843087 -64145847 + (GA)n Simple_repeat Simple_repeat 2 26 0 454 279 147 11 chr18 21843930 21844120 -64144814 + MIR SINE MIR 47 262 0 233 241 0 0 chr18 21844379 21844437 -64144497 + L2 LINE L2 3214 3271 -1 2553 66 3 0 chr18 21844805 21845110 -64143824 - AluSp SINE Alu -7 306 1 199 279 95 25 chr18 21846636 21846794 -64142140 - L2 LINE L2 -255 3058 2890 613 251 158 39 chr18 21846798 21847160 -64141774 + L2 LINE L2 2258 2662 -652 261 0 0 0 chr18 21847353 21847382 -64141552 + (TC)n Simple_repeat Simple_repeat 2 30 0 225 0 0 0 chr18 21847381 21847406 -64141528 + (TG)n Simple_repeat Simple_repeat 2 26 0 * 1665 195 59 3 chr18 21847409 21847732 -64141202 + MER2 DNA MER2_type 1 341 -3 315 0 0 0 chr18 21847733 21847768 -64141166 + (TG)n Simple_repeat Simple_repeat 2 36 0 189 151 57 0 chr18 21847797 21847850 -64141084 + (TA)n Simple_repeat Simple_repeat 1 56 0 460 235 15 52 chr18 21847883 21848019 -64140915 + L1ME3A LINE L1 6031 6161 -9 1898 130 43 13 chr18 21849597 21849897 -64139037 - AluJb SINE Alu -3 309 1 235 309 32 16 chr18 21849912 21850038 -64138896 - L1M4 LINE L1 -2391 3755 3628 198 286 18 18 chr18 21851213 21851269 -64137665 + L2 LINE L2 3125 3180 -92 2524 68 0 0 chr18 21851352 21851661 -64137273 + AluY SINE Alu 3 311 0 468 157 11 0 chr18 21854468 21854557 -64134377 + MER5A DNA MER1_type 11 100 -89 475 246 38 22 chr18 21855327 21855550 -64133384 - MIR SINE MIR -3 259 28 287 321 88 25 chr18 21855612 21855659 -64133275 + MER5B DNA MER1_type 1 44 -134 252 0 0 0 chr18 21855659 21855687 -64133247 + (CA)n Simple_repeat Simple_repeat 2 29 0 287 321 88 25 chr18 21855687 21855798 -64133136 + MER5B DNA MER1_type 44 169 -9 389 97 0 5 chr18 21855962 21856019 -64132915 - L1P4 LINE L1 -603 5562 5508 2144 108 10 0 chr18 21856246 21856541 -64132393 - AluSx SINE Alu -14 298 1 1115 180 99 23 chr18 21856580 21856973 -64131961 - L1M4 LINE L1 -645 5529 5101 2267 116 0 0 chr18 21857355 21857647 -64131287 - AluSx SINE Alu -20 292 1 1215 115 0 0 chr18 21857748 21857949 -64130985 - AluSg/x SINE Alu 0 326 126 2286 82 20 3 chr18 21857949 21858242 -64130692 - AluSq SINE Alu -15 298 1 833 266 107 61 chr18 21858301 21859137 -64129797 - L1MCc LINE L1 -4829 2293 1227 2087 127 7 0 chr18 21859967 21860258 -64128676 - AluJb SINE Alu -19 293 1 1298 142 37 166 chr18 21862142 21862300 -64126634 + MLT1A2 LTR MaLR 1 178 -196 2124 116 6 19 chr18 21862300 21862611 -64126323 + AluSx SINE Alu 1 307 -5 1298 142 37 166 chr18 21862611 21862881 -64126053 + MLT1A2 LTR MaLR 178 374 0 197 250 54 11 chr18 21863201 21863293 -64125641 - L2 LINE L2 -249 3023 2928 275 301 65 24 chr18 21863571 21863694 -64125240 + MIR SINE MIR 20 147 -61 26164 56 4 1 chr18 21864676 21868713 -64120221 + L1PA6 LINE L1 2108 6154 0 647 103 10 10 chr18 21869461 21869558 -64119376 + AluJo SINE Alu 86 182 -130 490 170 245 118 chr18 21870274 21870387 -64118547 - L1ME LINE L1 -342 5820 5723 1824 180 0 29 chr18 21870387 21870698 -64118236 - AluJo SINE Alu -10 302 1 490 170 245 118 chr18 21870698 21870712 -64118222 - L1ME LINE L1 -439 5723 5712 708 156 15 22 chr18 21870712 21870847 -64118087 - L1MB7 LINE L1 0 6184 6051 490 170 245 118 chr18 21870847 21871034 -64117900 - L1ME LINE L1 -450 5712 5451 370 309 65 25 chr18 21871277 21871478 -64117456 - MIR SINE MIR -49 213 5 2162 103 3 17 chr18 21873222 21873523 -64115411 + AluSx SINE Alu 1 297 -15 252 0 0 0 chr18 21875506 21875534 -64113400 + (TG)n Simple_repeat Simple_repeat 2 29 0 2516 64 0 7 chr18 21875695 21875993 -64112941 + AluY SINE Alu 1 296 -15 181 207 219 24 chr18 21876943 21877025 -64111909 - MIR SINE MIR -41 221 124 1868 118 21 49 chr18 21877407 21877694 -64111240 - AluJo SINE Alu -33 279 1 203 279 0 87 chr18 21878044 21878107 -64110827 - MIR3 SINE MIR -37 171 119 1948 189 19 3 chr18 21878107 21878466 -64110468 - MLT1A1 LTR MaLR 0 365 1 203 279 0 87 chr18 21878466 21878506 -64110428 - MIR3 SINE MIR -89 119 77 1108 176 29 0 chr18 21878647 21878852 -64110082 + AluJo SINE Alu 88 298 -14 337 174 119 37 chr18 21878926 21879035 -64109899 - MER96 DNA MER1_type? -7 168 51 3041 231 38 31 chr18 21880570 21881407 -64107527 - L1ME1 LINE L1 -9 6157 5315 2005 137 3 0 chr18 21881432 21881725 -64107209 - AluSx SINE Alu -18 294 1 23 0 0 29 chr18 21881736 21881752 -64107182 + AT_rich Low_complexity Low_complexity 1 16 -17 1979 106 62 0 chr18 21881752 21882044 -64106890 - AluSp SINE Alu -3 310 1 23 0 0 29 chr18 21882044 21882061 -64106873 + AT_rich Low_complexity Low_complexity 16 33 0 4049 113 8 13 chr18 21882067 21882401 -64106533 - L1PA15 LINE L1 -4 6161 5830 2024 95 60 0 chr18 21882401 21882685 -64106249 - AluSp SINE Alu -12 301 1 4049 113 8 13 chr18 21882685 21882945 -64105989 - L1PA15 LINE L1 -335 5830 5570 706 154 22 7 chr18 21882951 21883087 -64105847 - L1ME1 LINE L1 -821 5325 5188 2195 78 26 16 chr18 21883093 21883401 -64105533 - AluY SINE Alu 0 311 1 221 304 175 34 chr18 21883447 21883954 -64104980 + L2 LINE L2 2656 3242 -30 1352 151 71 8 chr18 21884331 21884583 -64104351 - AluJb SINE Alu -44 268 1 2018 152 65 8 chr18 21885715 21886084 -64102850 - MLT1B LTR MaLR 0 390 1 207 186 0 0 chr18 21886255 21886298 -64102636 + (CA)n Simple_repeat Simple_repeat 1 43 0 329 73 0 91 chr18 21888338 21888393 -64100541 + MER53 DNA DNA 137 186 -3 434 278 72 116 chr18 21888489 21888999 -64099935 - MLT1K LTR MaLR -61 527 40 206 88 59 0 chr18 21889142 21889176 -64099758 + CT-rich Low_complexity Low_complexity 4 39 0 237 270 100 0 chr18 21889728 21889828 -64099106 - AluJo SINE Alu -108 194 85 309 318 120 30 chr18 21889908 21890141 -64098793 + MIR SINE MIR 8 261 -1 398 329 60 40 chr18 21890827 21891079 -64097855 - L2 LINE L2 -527 2787 2531 965 121 24 12 chr18 21891338 21891504 -64097430 + AluSx SINE Alu 19 186 -126 21 0 0 0 chr18 21891906 21891927 -64097007 + GC_rich Low_complexity Low_complexity 1 21 0 444 278 54 0 chr18 21892732 21892854 -64096080 - MIR3 SINE MIR -20 188 56 2336 87 3 0 chr18 21893179 21893489 -64095445 + AluY SINE Alu 1 311 0 346 174 312 58 chr18 21895035 21895173 -64093761 + MER5B DNA MER1_type 4 176 -2 286 257 133 44 chr18 21896141 21896254 -64092680 + L2 LINE L2 3150 3272 0 789 156 8 0 chr18 21896318 21896440 -64092494 - FRAM SINE Alu -16 160 38 1765 231 220 23 chr18 21896558 21897117 -64091817 - MER115 DNA AcHobo -24 669 1 728 170 134 29 chr18 21897578 21897749 -64091185 + MER53 DNA DNA 1 189 0 2722 13 0 3 chr18 21898455 21898767 -64090167 + AluYa5 SINE Alu 1 311 0 1761 143 10 3 chr18 21899296 21899589 -64089345 + AluJb SINE Alu 1 295 -17 342 138 0 0 chr18 21899589 21899647 -64089287 + (GGGA)n Simple_repeat Simple_repeat 3 60 0 1712 76 8 42 chr18 21900483 21900747 -64088187 - AluSp SINE Alu -13 300 46 214 241 69 0 chr18 21900894 21900981 -64087953 + (GAGTG)n Simple_repeat Simple_repeat 3 95 0 211 242 20 30 chr18 21900949 21901048 -64087886 + GA-rich Low_complexity Low_complexity 4 101 0 * 8930 196 78 89 chr18 21902000 21902099 -64086835 - L1M4 LINE L1 -866 6091 5992 2305 90 3 0 chr18 21902099 21902409 -64086525 - AluY SINE Alu 0 311 1 8930 196 78 89 chr18 21902409 21902711 -64086223 - L1M4 LINE L1 -965 5992 5688 2386 81 0 0 chr18 21902711 21903019 -64085915 + AluSg SINE Alu 1 308 -2 8930 196 78 89 chr18 21903019 21903496 -64085438 - L1M4 LINE L1 -1269 5688 5207 818 158 24 0 chr18 21903496 21903623 -64085311 + FLAM_C SINE Alu 1 130 -13 8930 196 78 89 chr18 21903623 21903643 -64085291 - L1M4 LINE L1 -1750 5207 5188 1581 169 56 0 chr18 21903643 21903927 -64085007 - AluJo SINE Alu -12 300 1 8930 196 78 89 chr18 21903927 21904951 -64083983 - L1M4 LINE L1 -1769 5188 4154 1584 166 21 21 chr18 21904951 21905234 -64083700 - AluJb SINE Alu -29 283 1 8930 196 78 89 chr18 21905234 21906368 -64082566 - L1M4 LINE L1 -2803 4154 2940 2028 239 72 71 chr18 21906372 21906860 -64082074 - L1M4 LINE L1 -4681 2278 1792 1974 96 3 7 chr18 21906860 21907166 -64081768 + AluSc SINE Alu 1 305 0 2028 239 72 71 chr18 21907166 21907756 -64081178 - L1M4 LINE L1 -5167 1792 1205 315 305 52 13 chr18 21907813 21907967 -64080967 - L1M4 LINE L1 -5667 1188 1029 542 313 75 19 chr18 21908298 21908566 -64080368 - L1M4 LINE L1 -6569 290 8 2113 141 0 0 chr18 21908634 21908946 -64079988 + AluSx SINE Alu 1 312 0 25 51 0 0 chr18 21909068 21909107 -64079827 + AT_rich Low_complexity Low_complexity 1 39 0 438 20 0 0 chr18 21910586 21910637 -64078297 + (TG)n Simple_repeat Simple_repeat 1 51 0 182 314 50 41 chr18 21911278 21911399 -64077535 + MIR SINE MIR 46 167 -95 * 192 243 49 132 chr18 21911374 21911518 -64077416 - MIR3 SINE MIR -40 168 37 2251 54 3 63 chr18 21911729 21912045 -64076889 + AluY SINE Alu 1 297 -14 203 248 179 28 chr18 21913252 21913397 -64075537 - MIR SINE MIR -55 207 41 575 309 79 12 chr18 21914363 21914609 -64074325 - MIR SINE MIR 0 262 4 2343 78 0 0 chr18 21916613 21916909 -64072025 + AluSg1 SINE Alu 1 296 -13 3007 191 88 9 chr18 21917592 21918279 -64070655 + L1ME2 LINE L1 5424 6162 -2 2223 109 0 6 chr18 21918328 21918640 -64070294 + AluSx SINE Alu 1 310 -2 1068 65 0 0 chr18 21919380 21919518 -64069416 - L1MB7 LINE L1 -17 6167 6030 2112 103 0 0 chr18 21919825 21920148 -64068786 + AluSx SINE Alu 1 323 0 396 274 18 126 chr18 21920176 21920399 -64068535 + MIR3 SINE MIR 4 202 -6 2044 98 3 41 chr18 21920466 21920781 -64068153 + AluSx SINE Alu 1 303 -9 635 181 146 21 chr18 21921048 21921192 -64067742 - FRAM SINE Alu -4 162 1 437 223 19 48 chr18 21921423 21921526 -64067408 + L2 LINE L2 3183 3282 -31 317 180 82 0 chr18 21921545 21921606 -64067328 - L2 LINE L2 -56 3257 3192 629 330 107 32 chr18 21921628 21922230 -64066704 + L2 LINE L2 2402 3079 -193 2265 89 0 0 chr18 21922426 21922729 -64066205 - AluSx SINE Alu -9 303 1 192 250 0 105 chr18 21922867 21922907 -64066027 + MER5A DNA MER1_type 114 144 -45 2000 127 30 0 chr18 21922907 21923207 -64065727 - AluSx SINE Alu -3 309 1 192 250 0 105 chr18 21923207 21923242 -64065692 + MER5A DNA MER1_type 144 181 -8 2395 82 0 0 chr18 21923298 21923604 -64065330 + AluY SINE Alu 1 306 -5 945 257 88 71 chr18 21923614 21924105 -64064829 + MLT1J LTR MaLR 13 511 0 3703 120 12 68 chr18 21924134 21925056 -64063878 + L1M1 LINE L1 4653 5509 -795 2087 106 3 0 chr18 21925056 21925381 -64063553 - AluSp SINE Alu 0 326 1 3703 120 12 68 chr18 21925381 21925478 -64063456 + L1M1 LINE L1 5509 5610 -694 756 96 10 10 chr18 21925478 21925582 -64063352 + FLAM_C SINE Alu 14 117 -26 21 0 0 0 chr18 21925587 21925608 -64063326 + AT_rich Low_complexity Low_complexity 1 21 0 2036 130 0 22 chr18 21925615 21925930 -64063004 + AluSx SINE Alu 4 311 -1 1188 95 18 0 chr18 21925932 21926100 -64062834 + L1MA2 LINE L1 6134 6304 0 2059 118 0 3 chr18 21926206 21926518 -64062416 + AluSx SINE Alu 1 311 0 918 182 62 56 chr18 21926621 21926867 -64062067 - MSTD LTR MaLR 0 396 152 2156 108 3 10 chr18 21926867 21927181 -64061753 - AluSx SINE Alu 0 312 1 918 182 62 56 chr18 21927181 21927269 -64061665 - MSTD LTR MaLR -244 152 66 574 161 36 63 chr18 21927275 21927430 -64061504 - MLT1A2 LTR MaLR -216 174 4 2230 95 3 3 chr18 21927611 21927917 -64061017 + AluSq SINE Alu 3 308 0 748 190 0 29 chr18 21927986 21928123 -64060811 - FLAM_A SINE Alu 0 133 1 208 143 36 0 chr18 21928240 21928296 -64060638 + (TA)n Simple_repeat Simple_repeat 2 59 0 1093 176 42 70 chr18 21928388 21928672 -64060262 - MLT2D LTR ERVL -138 276 1 240 298 0 61 chr18 21928689 21928803 -64060131 + HAL1b LINE L1 819 925 -423 238 170 96 75 chr18 21928841 21928919 -64060015 + HAL1b LINE L1 789 871 -477 2102 137 7 0 chr18 21928919 21929225 -64059709 - AluSx SINE Alu -4 308 1 238 170 96 75 chr18 21929225 21929240 -64059694 + HAL1b LINE L1 871 884 -464 1369 166 74 36 chr18 21929240 21929600 -64059334 - MSTA LTR MaLR 0 364 2 2428 90 3 0 chr18 21930128 21930440 -64058494 + AluSp SINE Alu 1 313 0 3148 161 32 87 chr18 21930687 21930873 -64058061 - LTR8 LTR ERV1 0 691 496 2186 109 0 3 chr18 21930873 21931166 -64057768 + AluSx SINE Alu 2 293 -19 3148 161 32 87 chr18 21931166 21931707 -64057227 - LTR8 LTR ERV1 -195 496 4 2016 152 65 8 chr18 21932273 21932642 -64056292 - MLT1B LTR MaLR 0 390 1 207 186 0 0 chr18 21932813 21932856 -64056078 + (CA)n Simple_repeat Simple_repeat 1 43 0 638 93 0 56 chr18 21933257 21933364 -64055570 - AluSg/x SINE Alu -5 307 207 2279 88 0 36 chr18 21933402 21933709 -64055225 - AluSq SINE Alu -17 296 1 286 111 0 0 chr18 21933882 21933927 -64055007 + Alu SINE Alu 256 300 -1 23 0 0 0 chr18 21934361 21934384 -64054550 + AT_rich Low_complexity Low_complexity 1 23 0 219 69 0 0 chr18 21935037 21935066 -64053868 + (CAG)n Simple_repeat Simple_repeat 3 31 0 214 191 0 0 chr18 21935167 21935209 -64053725 + T-rich Low_complexity Low_complexity 1 42 0 2135 127 41 36 chr18 21936098 21936460 -64052474 + THE1B LTR MaLR 1 364 0 2422 71 0 13 chr18 21936686 21936996 -64051938 + AluY SINE Alu 1 306 -5 809 266 45 12 chr18 21937205 21937449 -64051485 - L1MC4a LINE L1 -1957 5851 5600 1090 98 0 0 chr18 21937764 21937897 -64051037 + AluSq/x SINE Alu 1 133 -179 2074 136 0 10 chr18 21937900 21938210 -64050724 + AluSx SINE Alu 1 307 -5 190 266 16 16 chr18 21938281 21938345 -64050589 + L2 LINE L2 3205 3268 -4 1909 175 3 0 chr18 21938766 21939069 -64049865 - AluJb SINE Alu -8 304 1 551 282 106 72 chr18 21939307 21939469 -64049465 - MLT1K LTR MaLR -3 585 430 664 194 57 0 chr18 21939469 21939593 -64049341 - MER94 DNA DNA 0 134 4 551 282 106 72 chr18 21939593 21939806 -64049128 - MLT1K LTR MaLR -158 430 197 1705 75 0 19 chr18 21940533 21940775 -64048159 - AluSc SINE Alu 0 309 72 2470 49 0 26 chr18 21940776 21941082 -64047852 - AluY SINE Alu -13 298 1 23 0 0 0 chr18 21941193 21941216 -64047718 + AT_rich Low_complexity Low_complexity 1 23 0 4342 204 38 52 chr18 21941310 21941577 -64047357 + L1M4 LINE L1 3705 3974 -2172 2387 67 0 26 chr18 21941577 21941890 -64047044 + AluY SINE Alu 1 305 -6 4342 204 38 52 chr18 21941890 21942856 -64046078 + L1M4 LINE L1 3974 4921 -1225 1928 146 17 20 chr18 21942856 21943157 -64045777 + AluJb SINE Alu 1 300 -12 298 200 30 70 chr18 21943191 21943291 -64045643 + MER20B DNA MER1_type 688 783 0 2493 61 0 22 chr18 21943852 21944164 -64044770 + AluY SINE Alu 1 305 -6 194 278 77 47 chr18 21944715 21944884 -64044050 + L2 LINE L2 555 728 -2586 3330 151 58 29 chr18 21945014 21945356 -64043578 - L1MB5 LINE L1 0 6174 5843 2059 182 5 20 chr18 21945356 21945751 -64043183 - MLT1B LTR MaLR 0 390 2 3330 151 58 29 chr18 21945751 21946066 -64042868 - L1MB5 LINE L1 -331 5843 5498 2369 104 0 0 chr18 21946191 21946500 -64042434 + AluSx SINE Alu 1 309 -3 221 265 184 59 chr18 21946551 21946614 -64042320 + MIR SINE MIR 109 163 -99 1718 166 48 0 chr18 21946614 21946904 -64042030 + AluJo SINE Alu 1 304 -8 221 265 184 59 chr18 21946904 21946976 -64041958 + MIR SINE MIR 163 261 -1 468 195 211 0 chr18 21947062 21947190 -64041744 - L2 LINE L2 -1 3312 3158 2124 95 3 50 chr18 21947547 21947864 -64041070 + AluSx SINE Alu 1 302 -10 1387 77 0 17 chr18 21947877 21948058 -64040876 + AluSg/x SINE Alu 132 309 -3 252 345 9 35 chr18 21948172 21948288 -64040646 + L2 LINE L2 2945 3057 -215 2226 91 3 10 chr18 21948309 21948653 -64040281 + AluSg SINE Alu 1 310 0 2361 106 0 0 chr18 21948836 21949139 -64039795 - AluSx SINE Alu -9 303 1 660 218 62 33 chr18 21949598 21949809 -64039125 + MIR SINE MIR 42 258 -4 312 63 0 63 chr18 21952104 21952167 -64036767 + (TTCC)n Simple_repeat Simple_repeat 3 61 0 1950 139 7 10 chr18 21952175 21952484 -64036450 - AluSx SINE Alu 0 312 5 2215 60 4 0 chr18 21952496 21952764 -64036170 - AluY SINE Alu 0 311 43 1555 134 42 80 chr18 21952764 21952924 -64036010 - AluJb SINE Alu -16 296 150 2364 87 0 0 chr18 21952924 21953211 -64035723 - AluSc SINE Alu -22 287 1 1555 134 42 80 chr18 21953211 21953356 -64035578 - AluJb SINE Alu -162 150 1 579 173 100 59 chr18 21953357 21953487 -64035447 - Charlie1 DNA MER1_type -27 2734 2590 672 97 0 11 chr18 21953487 21953580 -64035354 + HY4 scRNA scRNA 2 93 0 579 173 100 59 chr18 21953580 21953669 -64035265 - Charlie1 DNA MER1_type -171 2590 2506 612 224 9 0 chr18 21953691 21953807 -64035127 - FLAM_C SINE Alu -25 118 2 664 149 161 12 chr18 21953809 21953970 -64034964 - Charlie1 DNA MER1_type -208 2553 2369 1701 152 53 3 chr18 21953977 21954279 -64034655 - Charlie1 DNA MER1_type -2409 352 36 1878 120 36 45 chr18 21954442 21954801 -64034133 + L1MC3 LINE L1 7430 7785 0 1870 145 7 39 chr18 21955010 21955320 -64033614 - AluSx SINE Alu -12 300 1 2055 103 6 72 chr18 21956790 21957109 -64031825 - AluSx SINE Alu -14 298 1 952 161 125 26 chr18 21957228 21957420 -64031514 - AluJo SINE Alu -17 295 85 257 308 118 30 chr18 21957494 21957731 -64031203 + MIR SINE MIR 4 261 -1 322 363 58 17 chr18 21958429 21958669 -64030265 - L2 LINE L2 -534 2780 2531 1305 145 0 0 chr18 21958923 21959102 -64029832 + AluSx SINE Alu 1 179 -133 1996 107 4 4 chr18 21959395 21959667 -64029267 - AluSx SINE Alu -40 272 1 245 340 42 28 chr18 21960402 21960546 -64028388 + MIR3 SINE MIR 17 162 -46 2377 99 3 0 chr18 21960632 21960935 -64027999 - AluSp SINE Alu -9 304 1 2363 102 3 0 chr18 21962316 21962619 -64026315 + AluSp SINE Alu 1 304 -9 952 162 103 0 chr18 21962757 21962942 -64025992 + MER3 DNA MER1_type 6 209 0 258 222 0 0 chr18 21962899 21962953 -64025981 - MER3 DNA MER1_type -119 90 37 * 180 0 0 0 chr18 21963290 21963310 -64025624 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 1605 183 27 17 chr18 21963639 21963939 -64024995 + AluJb SINE Alu 3 305 -7 1611 144 39 78 chr18 21963947 21964253 -64024681 + AluJo SINE Alu 1 294 -18 2370 82 7 0 chr18 21964260 21964552 -64024382 + AluSq SINE Alu 1 294 -19 356 212 136 8 chr18 21964869 21964987 -64023947 - L1ME4a LINE L1 -28 6093 5961 2192 105 0 3 chr18 21964991 21965302 -64023632 - AluSq SINE Alu 0 312 3 318 243 39 55 chr18 21965318 21965499 -64023435 - L1ME4a LINE L1 -2313 5495 5318 2367 113 0 0 chr18 21965520 21965829 -64023105 - AluSq SINE Alu -4 309 1 1605 222 114 37 chr18 21965974 21966492 -64022442 - MLT1E LTR MaLR -2 591 34 191 125 25 0 chr18 21966522 21966562 -64022372 + CT-rich Low_complexity Low_complexity 2 42 0 402 83 42 0 chr18 21966684 21966756 -64022178 + CT-rich Low_complexity Low_complexity 1 75 0 2274 124 0 0 chr18 21966756 21967063 -64021871 - AluSg SINE Alu -1 309 3 2040 70 4 8 chr18 21967400 21967658 -64021276 + AluY SINE Alu 39 295 -16 1322 289 146 27 chr18 21968276 21969230 -64019704 - L2 LINE L2 -2 3311 2202 2474 81 0 0 chr18 21969230 21969527 -64019407 + AluSx SINE Alu 1 297 -15 1322 289 146 27 chr18 21969527 21969661 -64019273 - L2 LINE L2 -1111 2202 2085 189 224 35 0 chr18 21970087 21970145 -64018789 + L2 LINE L2 2891 2950 -322 640 167 30 45 chr18 21971529 21971661 -64017273 + FLAM_A SINE Alu 1 130 -3 418 272 67 46 chr18 21971979 21972174 -64016760 + L2 LINE L2 3072 3270 -2 2032 117 30 13 chr18 21972467 21972767 -64016167 + AluJb SINE Alu 1 305 -7 952 146 0 38 chr18 21972774 21972932 -64016002 + FRAM SINE Alu 13 164 -12 941 108 0 43 chr18 21973227 21973366 -64015568 - FLAM_C SINE Alu 0 133 1 2336 88 3 13 chr18 21973907 21974213 -64014721 + AluY SINE Alu 1 303 -8 2238 106 3 13 chr18 21974762 21975065 -64013869 + AluSx SINE Alu 2 301 -11 2176 123 0 7 chr18 21975068 21975369 -64013565 + AluSx SINE Alu 2 300 -12 1667 154 3 82 chr18 21975566 21975885 -64013049 + AluJo SINE Alu 1 294 -18 468 0 0 0 chr18 21975886 21975938 -64012996 + (TA)n Simple_repeat Simple_repeat 2 53 0 381 114 0 114 chr18 21976314 21976393 -64012541 - AluJ/FLAM SINE Alu -231 71 2 195 42 0 0 chr18 21976463 21976487 -64012447 + (TG)n Simple_repeat Simple_repeat 1 24 0 2344 117 0 0 chr18 21976848 21977156 -64011778 - AluSx SINE Alu -4 308 1 339 25 0 0 chr18 21977831 21977871 -64011063 + (CA)n Simple_repeat Simple_repeat 1 40 0 668 122 53 69 chr18 21977943 21978074 -64010860 + FLAM_C SINE Alu 2 130 -3 2206 90 24 0 chr18 21978084 21978374 -64010560 + AluSx SINE Alu 1 297 -15 2259 120 0 0 chr18 21979507 21979808 -64009126 + AluSx SINE Alu 1 301 -11 1589 189 32 0 chr18 21980689 21980969 -64007965 + AluJo SINE Alu 1 289 -23 2217 103 28 0 chr18 21981181 21981471 -64007463 + AluSx SINE Alu 1 298 -14 1270 167 4 31 chr18 21982480 21982708 -64006226 + MER66-int LTR ERV1 6892 7113 -1007 739 171 29 71 chr18 21982713 21982883 -64006051 + MER4D LTR ERV1 9 171 -701 1041 226 66 60 chr18 21982965 21983029 -64005905 + MER66-int LTR ERV1 6326 6388 -288 2425 100 0 0 chr18 21983029 21983338 -64005596 + AluSc SINE Alu 1 309 0 1041 226 66 60 chr18 21983338 21983622 -64005312 + MER66-int LTR ERV1 6388 6676 0 1570 127 52 49 chr18 21983739 21984006 -64004928 + AluSx SINE Alu 1 268 -44 938 265 26 19 chr18 21984097 21984365 -64004569 + MER41E LTR ERV1 226 495 -17 2221 92 3 0 chr18 21984502 21984883 -64004051 + AluSq SINE Alu 1 382 0 213 39 0 0 chr18 21985196 21985222 -64003712 + (TAAAAA)n Simple_repeat Simple_repeat 3 28 0 340 111 19 0 chr18 21985740 21985794 -64003140 + AluS SINE Alu 4 58 -245 2259 120 0 0 chr18 21986067 21986368 -64002566 + AluSx SINE Alu 1 301 -11 1589 189 32 0 chr18 21987252 21987532 -64001402 + AluJo SINE Alu 1 289 -23 1653 158 17 24 chr18 21987747 21988039 -64000895 + AluJb SINE Alu 1 290 -22 239 179 89 0 chr18 21988044 21988100 -64000834 - L1MC4 LINE L1 -23 8019 7959 2354 84 3 0 chr18 21988116 21988401 -64000533 - AluSp SINE Alu -26 287 2 214 211 0 0 chr18 21988449 21988487 -64000447 + (TA)n Simple_repeat Simple_repeat 1 38 0 1019 218 26 72 chr18 21988488 21988795 -64000139 - L1MC4 LINE L1 -125 7917 7625 2195 106 7 0 chr18 21988833 21989153 -63999781 + AluSx SINE Alu 1 322 0 2207 174 9 20 chr18 21989788 21990226 -63998708 - L1MB4 LINE L1 0 6180 5748 1970 158 0 0 chr18 21990246 21990543 -63998391 - AluJo SINE Alu -15 297 1 2048 122 0 11 chr18 21991299 21991577 -63997357 - AluSq SINE Alu -38 275 1 28 0 0 0 chr18 21992355 21992383 -63996551 + AT_rich Low_complexity Low_complexity 1 28 0 1761 178 11 0 chr18 21992383 21992670 -63996264 - AluJo SINE Alu -22 290 1 657 229 15 0 chr18 21992675 21992806 -63996128 - FLAM_A SINE Alu 0 133 1 2207 115 0 0 chr18 21992816 21993112 -63995822 - AluSx SINE Alu -16 296 1 444 105 0 0 chr18 21993140 21993216 -63995718 + (TTCC)n Simple_repeat Simple_repeat 3 78 0 2305 101 3 0 chr18 21993220 21993528 -63995406 - AluSg SINE Alu -1 309 1 2147 106 0 64 chr18 21993531 21993860 -63995074 - AluSx SINE Alu -4 308 1 977 121 0 14 chr18 21994334 21994474 -63994460 + FLAM_C SINE Alu 1 138 -5 855 267 11 0 chr18 21994616 21994807 -63994127 - MER58A DNA MER1_type -29 195 3 2232 119 10 0 chr18 21995162 21995465 -63993469 - AluSx SINE Alu -6 306 1 912 121 11 11 chr18 21995949 21996123 -63992811 + (TTTC)n Simple_repeat Simple_repeat 4 177 0 873 79 11 39 chr18 21996108 21996286 -63992648 + (TTCCC)n Simple_repeat Simple_repeat 5 177 0 * 326 225 22 0 chr18 21996284 21996373 -63992561 + CT-rich Low_complexity Low_complexity 3 93 0 * 2045 123 27 0 chr18 21996687 21996980 -63991954 - AluSq SINE Alu -12 301 1 2445 58 10 3 chr18 21997011 21997304 -63991630 - AluY SINE Alu -16 295 1 296 298 56 37 chr18 21997306 21997389 -63991545 + L1ME4a LINE L1 5602 5682 -2126 1611 210 62 0 chr18 21997389 21997638 -63991296 + MER2 DNA MER2_type 1 276 -68 2079 114 3 20 chr18 21997638 21997944 -63990990 - AluSx SINE Alu -11 301 1 1611 210 62 0 chr18 21997944 21998018 -63990916 + MER2 DNA MER2_type 276 344 0 296 298 56 37 chr18 21998018 21998095 -63990839 + L1ME4a LINE L1 5682 5765 -2043 320 229 71 59 chr18 21998202 21998343 -63990591 + L1ME4a LINE L1 5950 6095 -26 2391 105 0 0 chr18 21998343 21998649 -63990285 - AluSq SINE Alu -6 307 2 320 229 71 59 chr18 21998649 21998677 -63990257 + L1ME4a LINE L1 6095 6121 0 1031 261 79 25 chr18 21999117 21999322 -63989612 - L2 LINE L2 -6 3307 3115 234 0 0 0 chr18 21999322 21999348 -63989586 + (TG)n Simple_repeat Simple_repeat 2 27 0 1031 261 79 25 chr18 21999348 21999545 -63989389 - L2 LINE L2 -198 3115 2883 532 271 68 64 chr18 21999607 21999902 -63989032 - L1ME LINE L1 -469 5652 5357 269 252 99 69 chr18 22000193 22000324 -63988610 - MIR SINE MIR -9 253 119 829 229 58 85 chr18 22000370 22000387 -63988547 - MER93a LTR ERV1 -2 400 384 1751 175 3 16 chr18 22000387 22000696 -63988238 + AluJb SINE Alu 1 305 -7 829 229 58 85 chr18 22000696 22001089 -63987845 - MER93a LTR ERV1 -18 384 1 220 287 103 0 chr18 22001848 22001935 -63986999 + L2 LINE L2 3217 3312 -1 1896 165 8 52 chr18 22001939 22002007 -63986927 - MLT1A1 LTR MaLR 0 365 296 2215 125 0 6 chr18 22002007 22002319 -63986615 + AluSx SINE Alu 1 310 -2 1896 165 8 52 chr18 22002319 22002475 -63986459 - MLT1A1 LTR MaLR -69 296 135 2215 86 0 55 chr18 22002475 22002802 -63986132 - AluSc SINE Alu 0 309 1 2295 69 0 53 chr18 22002802 22003106 -63985828 - AluSc SINE Alu -21 288 1 1896 165 8 52 chr18 22003106 22003261 -63985673 - MLT1A1 LTR MaLR -228 137 1 1804 123 0 0 chr18 22003371 22003614 -63985320 - AluSc SINE Alu -19 290 48 372 289 50 8 chr18 22003720 22003841 -63985093 + L2 LINE L2 2285 2410 -904 236 341 0 12 chr18 22003844 22003926 -63985008 + L2 LINE L2 2647 2727 -587 193 298 126 40 chr18 22003945 22004143 -63984791 + L2 LINE L2 2859 3073 -199 2215 123 0 3 chr18 22004374 22004674 -63984260 - AluSg SINE Alu -11 299 1 1672 190 7 17 chr18 22004676 22004976 -63983958 - AluJo SINE Alu -15 297 1 240 302 0 0 chr18 22006146 22006199 -63982735 + L2 LINE L2 3122 3174 -98 702 232 19 48 chr18 22006215 22006422 -63982512 + MIR SINE MIR 18 218 -44 187 286 0 0 chr18 22006466 22006508 -63982426 + L2 LINE L2 3215 3256 -16 2163 122 0 10 chr18 22006853 22007156 -63981778 - AluSx SINE Alu -12 300 1 1607 167 3 60 chr18 22009419 22009736 -63979198 - AluJo SINE Alu -12 300 2 915 245 68 75 chr18 22009848 22010273 -63978661 - MLT1K LTR MaLR -12 576 155 188 296 28 0 chr18 22010523 22010594 -63978340 + MER5C DNA MER1_type 1 73 -251 748 138 8 8 chr18 22010751 22010874 -63978060 - FLAM_A SINE Alu -10 123 1 2388 79 3 38 chr18 22012503 22012818 -63976116 - AluSp SINE Alu -9 304 1 4932 175 22 22 chr18 22012849 22013589 -63975345 + L1MB3 LINE L1 5051 5793 -390 2198 129 0 3 chr18 22013589 22013891 -63975043 + AluSx SINE Alu 1 301 -11 4932 175 22 22 chr18 22013891 22014283 -63974651 + L1MB3 LINE L1 5793 6183 0 2239 109 0 3 chr18 22014293 22014597 -63974337 + AluSg SINE Alu 1 303 -7 2301 122 3 0 chr18 22015274 22015585 -63973349 + AluSx SINE Alu 1 312 0 1711 153 4 0 chr18 22015729 22015978 -63972956 + AluJo SINE Alu 6 255 -57 2143 121 23 0 chr18 22016240 22016567 -63972367 - AluSx SINE Alu 0 334 1 513 221 96 0 chr18 22017333 22017469 -63971465 + MIR SINE MIR 114 262 0 2032 129 25 3 chr18 22017671 22017957 -63970977 + AluSx SINE Alu 1 292 -20 2112 131 141 24 chr18 22018179 22018222 -63970712 - MSTA LTR MaLR 0 428 391 2276 112 3 0 chr18 22018222 22018526 -63970408 + AluSx SINE Alu 1 305 -7 2112 131 141 24 chr18 22018526 22018865 -63970069 - MSTA LTR MaLR -37 391 1 475 319 24 24 chr18 22019005 22019212 -63969722 + MIR SINE MIR 28 234 -28 221 273 11 11 chr18 22019617 22019705 -63969229 + A-rich Low_complexity Low_complexity 5 92 0 198 279 225 0 chr18 22020132 22020243 -63968691 - MIR SINE MIR -108 154 19 2194 109 3 7 chr18 22020300 22020602 -63968332 + AluSx SINE Alu 1 301 -11 195 139 0 0 chr18 22020752 22020788 -63968146 + (T)n Simple_repeat Simple_repeat 1 36 0 1758 195 129 18 chr18 22020914 22021355 -63967579 - MLT1D LTR MaLR 0 505 16 2257 82 26 7 chr18 22021356 22021661 -63967273 - AluY SINE Alu 0 311 1 310 297 180 34 chr18 22021707 22022236 -63966698 + L2 LINE L2 2656 3272 0 1018 173 13 89 chr18 22023439 22023676 -63965258 - MER20 DNA MER1_type 0 219 1 242 397 51 0 chr18 22023724 22023880 -63965054 - L2 LINE L2 -205 3067 2904 272 339 140 46 chr18 22024364 22024743 -63964191 - L2 LINE L2 -575 2739 2397 799 176 33 0 chr18 22024743 22024896 -63964038 + L1PB4 LINE L1 5997 6154 -2 272 339 140 46 chr18 22024896 22025059 -63963875 - L2 LINE L2 -917 2397 2251 2124 103 0 7 chr18 22025059 22025361 -63963573 + AluSg SINE Alu 1 300 -10 272 339 140 46 chr18 22025361 22025467 -63963467 - L2 LINE L2 -1063 2251 2029 1640 157 0 11 chr18 22025942 22026210 -63962724 - AluSq SINE Alu -48 265 1 1045 220 97 51 chr18 22026227 22026577 -63962357 - MER47A DNA MER2_type 0 366 1 680 287 48 75 chr18 22026869 22027165 -63961769 + L1ME LINE L1 4983 5264 -914 8500 51 0 0 chr18 22027165 22028988 -63959946 + L1PA5 LINE L1 4329 6151 -3 680 287 48 75 chr18 22028988 22029157 -63959777 + L1ME LINE L1 5264 5436 -742 253 289 21 10 chr18 22029229 22029326 -63959608 + L1ME LINE L1 5534 5631 -490 902 204 0 0 chr18 22029332 22029494 -63959440 - AluJo SINE Alu -17 295 134 5485 130 13 2 chr18 22029494 22030167 -63958767 - L1PA16 LINE L1 0 6166 5479 1783 129 3 60 chr18 22030167 22030484 -63958450 - AluSp SINE Alu -14 299 1 5485 130 13 2 chr18 22030484 22031049 -63957885 - L1PA16 LINE L1 -687 5479 4921 721 203 0 0 chr18 22031050 22031183 -63957751 - AluJo SINE Alu -169 133 1 297 272 98 22 chr18 22031201 22031385 -63957549 + L1ME LINE L1 5639 5836 -285 2204 108 0 0 chr18 22031683 22031988 -63956946 + AluSg SINE Alu 1 305 -5 21 0 0 0 chr18 22032527 22032548 -63956386 + AT_rich Low_complexity Low_complexity 1 21 0 1763 147 13 26 chr18 22033641 22033947 -63954987 + AluJb SINE Alu 1 302 -10 2139 117 0 13 chr18 22034012 22034328 -63954606 + AluSx SINE Alu 1 312 0 236 30 30 0 chr18 22034621 22034654 -63954280 + (CAAA)n Simple_repeat Simple_repeat 4 37 0 1897 140 0 3 chr18 22034832 22035132 -63953802 - AluSx SINE Alu -13 299 1 444 278 54 0 chr18 22035955 22036077 -63952857 - MIR3 SINE MIR -20 188 56 2336 87 3 0 chr18 22036402 22036712 -63952222 + AluY SINE Alu 1 311 0 346 174 312 58 chr18 22038258 22038396 -63950538 + MER5B DNA MER1_type 4 176 -2 286 257 133 44 chr18 22039363 22039476 -63949458 + L2 LINE L2 3150 3272 0 789 156 8 0 chr18 22039540 22039662 -63949272 - FRAM SINE Alu -16 160 38 1765 231 220 23 chr18 22039780 22040339 -63948595 - MER115 DNA AcHobo -24 669 1 728 170 134 29 chr18 22040800 22040971 -63947963 + MER53 DNA DNA 1 189 0 2105 71 7 36 chr18 22041677 22041986 -63946948 + AluSp SINE Alu 1 300 -13 342 138 0 0 chr18 22042822 22042880 -63946054 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 1761 143 10 3 chr18 22042880 22043173 -63945761 - AluJb SINE Alu -17 295 1 2722 13 0 3 chr18 22043702 22044014 -63944920 - AluYa5 SINE Alu 0 311 1 414 273 136 50 chr18 22044226 22044446 -63944488 + MIR SINE MIR 21 259 -3 252 308 61 103 chr18 22044451 22044665 -63944269 + L2 LINE L2 3047 3251 -21 2207 103 0 3 chr18 22044810 22045121 -63943813 + AluSx SINE Alu 1 310 -2 1401 184 21 3 chr18 22045980 22046262 -63942672 + L1MC4 LINE L1 7350 7636 -406 2250 87 3 0 chr18 22046264 22046563 -63942371 - AluSp SINE Alu -13 300 1 424 289 14 31 chr18 22046780 22047015 -63941919 + GA-rich Low_complexity Low_complexity 1 231 0 228 248 19 38 chr18 22047290 22047395 -63941539 + GA-rich Low_complexity Low_complexity 2 104 0 243 122 0 0 chr18 22047447 22047496 -63941438 + (TAAAAA)n Simple_repeat Simple_repeat 3 51 0 623 229 37 11 chr18 22047511 22047699 -63941235 + L1MC4 LINE L1 7710 7902 -140 482 267 7 0 chr18 22047763 22047916 -63941018 + L1MC4 LINE L1 7882 7995 0 297 226 92 40 chr18 22047917 22048091 -63940843 + L1MC5 LINE L1 7708 7911 -50 282 272 88 56 chr18 22049491 22049616 -63939318 - MIR SINE MIR -63 145 17 210 71 0 0 chr18 22050355 22050383 -63938551 + (TCTA)n Simple_repeat Simple_repeat 1 28 0 1342 158 32 70 chr18 22050383 22050668 -63938266 - AluJo SINE Alu -38 274 1 2130 117 0 0 chr18 22051454 22051754 -63937180 - AluSx SINE Alu -11 301 2 1827 122 0 4 chr18 22052145 22052416 -63936518 + AluSx SINE Alu 1 270 -42 248 268 110 47 chr18 22052529 22052656 -63936278 - MIR SINE MIR -36 226 92 411 323 107 42 chr18 22052713 22053023 -63935911 + L2 LINE L2 2942 3271 -1 300 91 0 0 chr18 22053116 22053160 -63935774 + (TG)n Simple_repeat Simple_repeat 1 44 0 831 183 23 29 chr18 22053683 22053858 -63935076 - AluJo SINE Alu -19 293 120 240 35 0 0 chr18 22053908 22053937 -63934997 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2226 97 0 7 chr18 22054294 22054603 -63934331 + AluSg SINE Alu 1 307 -3 464 237 51 51 chr18 22054836 22055013 -63933921 - MER104 DNA MER2_type -3 177 1 265 340 137 13 chr18 22055282 22055741 -63933193 - L2 LINE L2 -784 2530 2015 230 336 36 9 chr18 22056124 22056234 -63932700 - L2 LINE L2 -1636 1678 1566 757 211 7 21 chr18 22056346 22056488 -63932446 + AluJo SINE Alu 5 144 -168 1664 146 44 0 chr18 22056600 22056875 -63932059 - AluJb SINE Alu -7 305 19 2309 80 0 0 chr18 22056896 22057196 -63931738 - AluSg SINE Alu -4 306 7 1828 164 0 0 chr18 22058424 22058728 -63930206 - AluSg SINE Alu -6 304 1 32 0 0 0 chr18 22059336 22059368 -63929566 + AT_rich Low_complexity Low_complexity 1 32 0 715 149 18 0 chr18 22061139 22061253 -63927681 + AluJb SINE Alu 176 291 -21 21 0 0 0 chr18 22061253 22061274 -63927660 + AT_rich Low_complexity Low_complexity 1 21 0 262 315 165 16 chr18 22062377 22062504 -63926430 + L2 LINE L2 2240 2385 -929 416 151 62 4 chr18 22062519 22062954 -63925980 + L1MB2 LINE L1 5601 6131 -36 2172 98 0 19 chr18 22062954 22063270 -63925664 + AluSq SINE Alu 1 310 -3 1052 144 109 26 chr18 22063302 22063531 -63925403 + AluJb SINE Alu 52 299 -13 719 276 50 85 chr18 22063619 22064151 -63924783 + MER34 LTR ERV1 3 623 -21 38 0 0 0 chr18 22064676 22064714 -63924220 + GC_rich Low_complexity Low_complexity 1 38 0 204 97 0 0 chr18 22064902 22064933 -63924001 + (TCCCG)n Simple_repeat Simple_repeat 2 32 0 381 276 10 0 chr18 22065964 22066062 -63922872 - MER94 DNA DNA -31 103 5 1976 106 0 14 chr18 22066165 22066457 -63922477 - AluSx SINE Alu -24 288 1 2357 80 0 0 chr18 22066980 22067279 -63921655 + AluSx SINE Alu 1 299 -13 551 149 19 28 chr18 22067281 22067388 -63921546 - L1MA10 LINE L1 -2 6332 6227 406 200 0 0 chr18 22267834 22267909 -63721025 + MER5A DNA MER1_type 1 75 -114 1085 154 30 35 chr18 22267909 22268110 -63720824 + AluJo SINE Alu 86 285 -27 1400 188 55 11 chr18 22268111 22268382 -63720552 - MER39 LTR ERV1 -421 286 4 1895 147 0 10 chr18 22268862 22269175 -63719759 - AluSx SINE Alu -2 310 1 383 238 170 80 chr18 22269415 22269506 -63719428 - L1MC/D LINE L1 -343 5778 5697 1563 137 111 0 chr18 22269506 22269768 -63719166 - AluJb SINE Alu -21 291 1 383 238 170 80 chr18 22269768 22269972 -63718962 - L1MC/D LINE L1 -424 5697 5513 2014 99 3 31 chr18 22269972 22270107 -63718827 + AluSx SINE Alu 1 138 -172 1948 101 4 4 chr18 22270107 22270375 -63718559 + AluSq SINE Alu 1 268 -45 2189 101 0 0 chr18 22270380 22270677 -63718257 + AluSc SINE Alu 1 297 -12 2014 99 3 31 chr18 22270677 22270853 -63718081 + AluSx SINE Alu 142 310 0 383 238 170 80 chr18 22270853 22270931 -63718003 - L1MC/D LINE L1 -608 5513 5357 885 198 11 0 chr18 22270932 22271109 -63717825 - AluJb SINE Alu -1 311 133 23 54 0 0 chr18 22271144 22271181 -63717753 + AT_rich Low_complexity Low_complexity 1 37 0 1338 203 33 80 chr18 22271384 22271749 -63717185 - MLT1A2 LTR MaLR -26 348 1 768 141 137 93 chr18 22271763 22272011 -63716923 + ORSL DNA AcHobo 1 259 -16 1498 206 91 77 chr18 22272331 22272394 -63716540 - L1ME3 LINE L1 -2 6160 6099 1930 149 0 0 chr18 22272394 22272695 -63716239 - AluSx SINE Alu -11 301 1 1498 206 91 77 chr18 22272695 22272722 -63716212 - L1ME3 LINE L1 -63 6099 6074 2302 165 100 24 chr18 22272722 22272945 -63715989 - MLT1F LTR MaLR -2 540 335 2258 97 0 0 chr18 22272945 22273245 -63715689 + AluSx SINE Alu 1 300 -12 2302 165 100 24 chr18 22273245 22273523 -63715411 - MLT1F LTR MaLR -207 335 1 1498 206 91 77 chr18 22273523 22273937 -63714997 - L1ME3 LINE L1 -88 6074 5648 203 59 0 29 chr18 22274520 22274554 -63714380 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 1964 125 0 0 chr18 22274557 22274844 -63714090 - AluSx SINE Alu -25 287 1 1607 161 39 7 chr18 22274889 22275174 -63713760 - AluJb SINE Alu -18 294 1 1695 184 3 0 chr18 22275588 22275882 -63713052 + AluJb SINE Alu 1 295 -17 2162 115 0 3 chr18 22276223 22276527 -63712407 - AluSx SINE Alu -9 303 1 226 371 0 34 chr18 22276951 22277040 -63711894 - L3 LINE CR1 -419 1158 1073 1064 138 0 16 chr18 22277049 22277238 -63711696 + AluJb SINE Alu 127 312 0 553 246 69 17 chr18 22277299 22277474 -63711460 - L3 LINE CR1 -553 1024 841 246 290 28 28 chr18 22277591 22277698 -63711236 + MER5A DNA MER1_type 56 162 -27 * 273 240 66 66 chr18 22277616 22277737 -63711197 - MER5A DNA MER1_type -68 121 1 207 0 0 0 chr18 22278074 22278097 -63710837 + (TATG)n Simple_repeat Simple_repeat 4 26 0 1244 175 16 23 chr18 22278097 22278354 -63710580 - AluJo SINE Alu -34 278 24 832 154 0 0 chr18 22278380 22278503 -63710431 - FLAM_C SINE Alu -10 123 1 1836 136 36 0 chr18 22278524 22278803 -63710131 - AluJb SINE Alu -23 289 1 21 71 0 0 chr18 22279176 22279218 -63709716 + AT_rich Low_complexity Low_complexity 1 42 0 1747 180 0 0 chr18 22279329 22279635 -63709299 - AluJb SINE Alu -6 306 1 231 36 0 0 chr18 22279929 22279957 -63708977 + (T)n Simple_repeat Simple_repeat 1 28 0 476 240 65 26 chr18 22280168 22280322 -63708612 - MLT1J LTR MaLR -339 172 13 2230 78 0 3 chr18 22280332 22280627 -63708307 - AluSg SINE Alu -5 305 12 213 39 0 0 chr18 22281154 22281180 -63707754 + (TTTTTA)n Simple_repeat Simple_repeat 3 28 0 2096 92 3 0 chr18 22281493 22281870 -63707064 - AluSq SINE Alu 0 378 1 373 273 0 0 chr18 22282007 22282084 -63706850 - MER41E LTR ERV1 -17 495 419 192 250 0 105 chr18 22282308 22282348 -63706586 + MER5A DNA MER1_type 114 144 -45 2013 127 30 0 chr18 22282348 22282647 -63706287 - AluSx SINE Alu -4 308 1 192 250 0 105 chr18 22282647 22282682 -63706252 + MER5A DNA MER1_type 144 181 -8 2395 82 0 0 chr18 22282738 22283044 -63705890 + AluY SINE Alu 1 306 -5 928 259 88 71 chr18 22283054 22283545 -63705389 + MLT1J LTR MaLR 13 511 0 3703 120 12 68 chr18 22283574 22284496 -63704438 + L1M1 LINE L1 4653 5509 -795 2087 106 3 0 chr18 22284496 22284817 -63704117 - AluSp SINE Alu 0 322 1 3703 120 12 68 chr18 22284817 22284914 -63704020 + L1M1 LINE L1 5509 5610 -694 871 187 19 77 chr18 22284914 22285123 -63703811 + AluJo SINE Alu 14 210 -102 35 0 0 0 chr18 22285242 22285277 -63703657 + AT_rich Low_complexity Low_complexity 1 35 0 853 181 0 0 chr18 22285277 22285410 -63703524 - FLAM_C SINE Alu 0 133 1 2226 78 0 0 chr18 22285685 22285981 -63702953 + AluY SINE Alu 1 296 -15 1583 201 0 3 chr18 22286744 22287053 -63701881 - AluJb SINE Alu -4 308 1 1952 124 0 3 chr18 22288084 22288375 -63700559 + AluSx SINE Alu 10 299 -13 636 187 0 0 chr18 22289050 22289157 -63699777 + FLAM_C SINE Alu 2 108 -35 29 47 0 0 chr18 22289165 22289208 -63699726 + AT_rich Low_complexity Low_complexity 1 43 0 213 333 0 71 chr18 22289441 22289540 -63699394 - MIR SINE MIR -81 181 90 1414 153 51 29 chr18 22289777 22290190 -63698744 - AluJo SINE Alu 0 419 1 362 224 0 13 chr18 22290906 22290982 -63697952 + MLT1J LTR MaLR 102 176 -335 2042 116 0 0 chr18 22290994 22291286 -63697648 + AluSq SINE Alu 9 300 -13 240 35 0 0 chr18 22291288 22291317 -63697617 + (GA)n Simple_repeat Simple_repeat 2 30 0 709 161 0 88 chr18 22291321 22291458 -63697476 + FLAM_C SINE Alu 1 125 -8 384 325 108 4 chr18 22291698 22291929 -63697005 + L2 LINE L2 2425 2679 -635 276 330 100 0 chr18 22292207 22292307 -63696627 + L2 LINE L2 2595 2704 -610 911 194 68 5 chr18 22292313 22292504 -63696430 - MER3 DNA MER1_type -5 204 2 2768 209 13 17 chr18 22292846 22293374 -63695560 + MLT2B3 LTR ERVL 1 480 -40 252 246 0 0 chr18 22293402 22293471 -63695463 + (TA)n Simple_repeat Simple_repeat 1 69 0 278 49 195 0 chr18 22293484 22293525 -63695409 + MLT2D LTR ERVL 366 414 0 419 291 71 8 chr18 22293635 22293762 -63695172 + L2 LINE L2 3137 3271 -1 280 246 58 0 chr18 22294641 22294710 -63694224 + MLT1F LTR MaLR 24 96 -446 1247 111 0 0 chr18 22294805 22294985 -63693949 + AluSq SINE Alu 134 313 0 255 191 0 0 chr18 22294988 22295030 -63693904 + MLT1H LTR MaLR 241 282 -313 525 234 168 43 chr18 22295081 22295290 -63693644 + MLT1H LTR MaLR 321 549 0 769 108 0 0 chr18 22295301 22295403 -63693531 + FRAM SINE Alu 58 159 -17 22 35 0 0 chr18 22295940 22295969 -63692965 + AT_rich Low_complexity Low_complexity 1 29 0 352 271 84 0 chr18 22296301 22296408 -63692526 + MER5C DNA MER1_type 12 127 -197 1785 119 0 0 chr18 22296498 22296751 -63692183 + AluSx SINE Alu 43 295 -17 1786 168 10 0 chr18 22296877 22297181 -63691753 + AluJb SINE Alu 1 307 -5 342 318 119 8 chr18 22297711 22297837 -63691097 + MIR SINE MIR 73 212 -50 697 143 25 8 chr18 22297860 22297979 -63690955 + L1MA9 LINE L1 5961 6081 -231 421 222 9 9 chr18 22297981 22298089 -63690845 + L1MA9 LINE L1 6180 6287 -25 2062 94 10 19 chr18 22298108 22298416 -63690518 - AluSc SINE Alu -4 305 1 387 0 0 0 chr18 22300022 22300065 -63688869 + (CA)n Simple_repeat Simple_repeat 1 43 0 314 375 42 0 chr18 22300458 22300578 -63688356 - L2 LINE L2 0 3272 3148 748 169 23 0 chr18 22301634 22301764 -63687170 + AluJo SINE Alu 1 133 -169 656 147 19 19 chr18 22301764 22301920 -63687014 + GA-rich Low_complexity Low_complexity 3 158 0 926 193 0 11 chr18 22301920 22302107 -63686827 + AluJo SINE Alu 128 312 0 439 92 163 102 chr18 22302435 22302533 -63686401 - AluJb SINE Alu -124 188 85 1988 127 0 3 chr18 22302544 22302844 -63686090 - AluSx SINE Alu -4 308 10 287 254 70 70 chr18 22303055 22303164 -63685770 + L1ME4a LINE L1 5710 5822 -299 1923 117 0 24 chr18 22303164 22303474 -63685460 + AluSq SINE Alu 2 304 0 287 254 70 70 chr18 22303474 22303548 -63685386 + L1ME4a LINE L1 5821 5894 -227 1961 128 7 3 chr18 22303589 22303895 -63685039 + AluSq SINE Alu 1 307 -6 484 272 83 82 chr18 22303936 22304157 -63684777 - MLT1L LTR MaLR -172 394 123 255 185 37 74 chr18 22304245 22304326 -63684608 - MLT1L LTR MaLR -537 78 1 689 206 8 0 chr18 22304412 22304538 -63684396 + FLAM_C SINE Alu 2 128 -5 23 0 0 0 chr18 22304538 22304561 -63684373 + AT_rich Low_complexity Low_complexity 1 23 0 1693 151 20 16 chr18 22304565 22304870 -63684064 + AluJo SINE Alu 1 306 -6 2287 100 0 0 chr18 22304988 22305298 -63683636 + AluSg SINE Alu 1 310 0 301 302 192 44 chr18 22305896 22306078 -63682856 + MIR SINE MIR 10 218 -44 281 258 156 56 chr18 22306414 22306588 -63682346 + MIR SINE MIR 20 259 -3 2095 125 3 0 chr18 22306625 22306937 -63681997 + AluSq SINE Alu 1 313 0 2028 135 0 3 chr18 22307299 22307610 -63681324 - AluJb SINE Alu 0 312 3 272 281 43 6 chr18 22308070 22308234 -63680700 + (TG)n Simple_repeat Simple_repeat 1 170 0 31 92 0 0 chr18 22308329 22308416 -63680518 + GC_rich Low_complexity Low_complexity 1 87 0 21 36 0 0 chr18 22308579 22308607 -63680327 + GC_rich Low_complexity Low_complexity 1 28 0 267 79 0 0 chr18 22308607 22308645 -63680289 + (GGGTG)n Simple_repeat Simple_repeat 4 41 0 386 365 47 43 chr18 22309105 22309338 -63679596 - MIR SINE MIR 0 262 29 2093 94 0 10 chr18 22309538 22309835 -63679099 - AluSq SINE Alu -19 294 1 895 319 135 42 chr18 22309866 22310429 -63678505 - L2 LINE L2 -922 2392 1883 183 42 0 0 chr18 22310429 22310453 -63678481 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1975 103 4 4 chr18 22310453 22310734 -63678200 - AluSq SINE Alu -32 281 1 895 319 135 42 chr18 22310734 22310841 -63678093 - L2 LINE L2 -1430 1884 1658 2349 142 33 79 chr18 22310841 22311118 -63677816 + L1MB7 LINE L1 5284 5572 -612 2304 99 0 0 chr18 22311118 22311430 -63677504 - AluSx SINE Alu 0 312 1 2349 142 33 79 chr18 22311430 22311487 -63677447 + L1MB7 LINE L1 5572 5630 -554 2262 110 0 0 chr18 22311487 22311796 -63677138 - AluSc SINE Alu 0 309 1 2349 142 33 79 chr18 22311796 22311981 -63676953 + L1MB7 LINE L1 5630 5780 -404 2027 125 14 0 chr18 22311981 22312277 -63676657 + AluSx SINE Alu 1 300 -12 1335 219 66 33 chr18 22312291 22312624 -63676310 - MLT1A2 LTR MaLR -29 345 2 2103 169 45 50 chr18 22312624 22312828 -63676106 - MLT1A2-int LTR MaLR -6 1729 1526 1836 123 33 20 chr18 22312828 22313130 -63675804 - AluJo SINE Alu -1 311 6 2103 169 45 50 chr18 22313130 22313344 -63675590 - MLT1A2-int LTR MaLR -209 1526 1313 358 123 0 18 chr18 22313388 22313445 -63675489 - MLT1A2 LTR MaLR -311 63 8 2058 140 85 3 chr18 22313445 22313809 -63675125 + L1MB7 LINE L1 5772 6165 -19 270 280 13 0 chr18 22314806 22314881 -63674053 + ORSL DNA AcHobo 200 275 0 2676 10 0 0 chr18 22315148 22315447 -63673487 - AluYa5 SINE Alu -12 299 1 1769 146 37 22 chr18 22315475 22315504 -63673430 - MER4D LTR ERV1 -545 327 300 2186 90 0 34 chr18 22315504 22315825 -63673109 + AluSx SINE Alu 1 310 -2 1769 146 37 22 chr18 22315825 22316117 -63672817 - MER4D LTR ERV1 -572 300 1 207 0 0 0 chr18 22316617 22316640 -63672294 + (T)n Simple_repeat Simple_repeat 1 23 0 28 0 0 0 chr18 22316659 22316687 -63672247 + GC_rich Low_complexity Low_complexity 1 28 0 2004 125 3 3 chr18 22316792 22317087 -63671847 - AluSx SINE Alu -17 295 1 360 0 0 0 chr18 22317096 22317136 -63671798 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 2114 104 0 0 chr18 22317151 22317430 -63671504 - AluSc SINE Alu -30 279 1 287 234 72 126 chr18 22317434 22317545 -63671389 + MIR SINE MIR 47 151 -111 981 191 242 0 chr18 22317545 22317776 -63671158 + AluJo SINE Alu 1 287 -15 315 122 0 0 chr18 22317776 22317825 -63671109 + (GGGGA)n Simple_repeat Simple_repeat 1 49 0 2146 104 0 7 chr18 22317867 22318165 -63670769 + AluSg SINE Alu 1 296 -14 1712 206 6 3 chr18 22318180 22318496 -63670438 - MER7A DNA MER2_type 0 346 32 377 247 12 0 chr18 22318514 22318599 -63670335 + MIR SINE MIR 159 244 -18 356 299 60 8 chr18 22319084 22319201 -63669733 + MIR SINE MIR 119 241 -21 371 331 31 17 chr18 22319278 22319566 -63669368 + L2 LINE L2 2287 2579 -735 207 333 111 13 chr18 22320621 22320774 -63668160 - MIR SINE MIR -6 256 89 1916 151 7 0 chr18 22320972 22321264 -63667670 + AluJo SINE Alu 1 294 -18 2402 94 0 0 chr18 22321388 22321697 -63667237 + AluSc SINE Alu 1 309 0 884 244 211 14 chr18 22323146 22323572 -63665362 + LTR33 LTR ERVL 7 516 -5 1442 96 30 0 chr18 22323686 22323884 -63665050 + AluSg/x SINE Alu 89 292 -18 376 293 86 11 chr18 22324057 22324231 -63664703 - MIR SINE MIR -2 260 74 542 270 17 23 chr18 22324504 22324678 -63664256 - MIR3 SINE MIR -16 192 20 1937 100 4 15 chr18 22325833 22326103 -63662831 - AluSc SINE Alu -22 287 21 998 195 36 10 chr18 22326496 22326691 -63662243 + AluJo SINE Alu 88 287 -25 469 203 74 55 chr18 22328498 22328661 -63660273 - LTR43 LTR ERV1 -306 296 131 5704 189 111 65 chr18 22328716 22330295 -63658639 - MER52A LTR ERV1 0 1755 1 1361 205 122 46 chr18 22331032 22331319 -63657615 - MLT1D LTR MaLR -6 499 163 2444 161 19 27 chr18 22331319 22331579 -63657355 - L1MB3 LINE L1 -2 6181 5925 2267 111 0 13 chr18 22331579 22331885 -63657049 + AluSx SINE Alu 1 302 -10 2444 161 19 27 chr18 22331885 22332103 -63656831 - L1MB3 LINE L1 -258 5925 5707 1361 205 122 46 chr18 22332103 22332274 -63656660 - MLT1D LTR MaLR -342 163 6 2452 88 0 13 chr18 22333115 22333423 -63655511 + AluSg SINE Alu 1 304 -6 1851 174 0 0 chr18 22333717 22334010 -63654924 + AluJb SINE Alu 1 293 -19 21 71 0 0 chr18 22334134 22334176 -63654758 + AT_rich Low_complexity Low_complexity 1 42 0 1955 136 36 0 chr18 22334549 22334828 -63654106 + AluJb SINE Alu 1 289 -23 826 154 0 0 chr18 22334849 22334972 -63653962 + FLAM_C SINE Alu 1 123 -10 1338 175 16 23 chr18 22334998 22335255 -63653679 + AluJo SINE Alu 24 278 -34 207 0 0 0 chr18 22335255 22335278 -63653656 + (CATA)n Simple_repeat Simple_repeat 4 26 0 227 240 66 66 chr18 22335615 22335736 -63653198 + MER5A DNA MER1_type 1 121 -68 202 290 28 28 chr18 22335654 22335761 -63653173 - MER5A DNA MER1_type -27 162 56 * 480 246 69 17 chr18 22335878 22336053 -63652881 + L3 LINE CR1 841 1024 -553 1131 138 0 16 chr18 22336114 22336303 -63652631 - AluJb SINE Alu 0 312 127 194 371 0 34 chr18 22336312 22336401 -63652533 + L3 LINE CR1 1073 1158 -419 2381 113 0 0 chr18 22336825 22337135 -63651799 + AluSx SINE Alu 1 310 -2 2228 93 0 0 chr18 22337546 22337826 -63651108 + AluSg SINE Alu 1 280 -30 424 311 8 0 chr18 22338652 22338771 -63650163 + MER5B DNA MER1_type 3 122 -56 180 0 0 0 chr18 22338880 22338900 -63650034 + (CA)n Simple_repeat Simple_repeat 2 21 0 186 143 0 0 chr18 22339158 22339193 -63649741 + (A)n Simple_repeat Simple_repeat 1 35 0 237 65 0 0 chr18 22339826 22339857 -63649077 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1896 145 0 20 chr18 22339879 22340175 -63648759 + AluJo SINE Alu 11 300 -12 735 190 0 0 chr18 22340182 22340298 -63648636 - FLAM_A SINE Alu -17 116 1 1138 158 0 11 chr18 22340417 22340600 -63648334 - AluJb SINE Alu 0 312 132 45 34 0 0 chr18 22340600 22340659 -63648275 + AT_rich Low_complexity Low_complexity 1 59 0 1917 125 22 58 chr18 22340772 22340957 -63647977 - AluSg SINE Alu -8 302 131 2233 95 6 13 chr18 22340957 22341272 -63647662 - AluSq SINE Alu 0 313 1 1917 125 22 58 chr18 22341272 22341399 -63647535 - AluSg SINE Alu -179 131 1 2175 118 3 25 chr18 22342132 22342447 -63646487 + AluSx SINE Alu 3 310 -2 5112 122 12 14 chr18 22342702 22343557 -63645377 + L1P4 LINE L1 4576 5436 -732 185 266 32 65 chr18 22344062 22344216 -63644718 - L2 LINE L2 -289 2983 2835 2202 152 6 23 chr18 22344269 22344618 -63644316 + MER61A LTR ERV1 1 343 0 318 273 151 22 chr18 22345587 22345726 -63643208 + MIR SINE MIR 24 180 -82 245 307 79 0 chr18 22347184 22347298 -63641636 + MIR SINE MIR 23 145 -117 216 0 0 0 chr18 22347598 22347622 -63641312 + (CCCCG)n Simple_repeat Simple_repeat 1 24 0 197 182 18 0 chr18 22348071 22348126 -63640808 + C-rich Low_complexity Low_complexity 3 58 0 410 262 48 0 chr18 22348746 22348872 -63640062 + MIR SINE MIR 21 152 -110 1655 153 70 0 chr18 22349721 22350008 -63638926 + AluJo SINE Alu 1 307 -5 1445 115 0 50 chr18 22350120 22350338 -63638596 - AluSq SINE Alu -85 228 22 316 220 201 56 chr18 22351278 22351375 -63637559 - L1ME4a LINE L1 -5 6116 6034 1513 131 209 16 chr18 22351375 22351681 -63637253 - MLT1A1 LTR MaLR 0 365 1 316 220 201 56 chr18 22351681 22351851 -63637083 - L1ME4a LINE L1 -87 6034 5810 238 298 170 0 chr18 22351859 22351953 -63636981 - L2 LINE L2 -5 3308 3199 650 269 79 9 chr18 22352061 22352277 -63636657 + MIR SINE MIR 15 245 -17 203 138 0 0 chr18 22352286 22352315 -63636619 + (TAG)n Simple_repeat Simple_repeat 1 29 0 1495 188 8 0 chr18 22352589 22352839 -63636095 + AluJb SINE Alu 2 253 -59 2567 131 73 58 chr18 22353987 22354492 -63634442 + L1MB2 LINE L1 5644 6171 0 347 241 128 8 chr18 22354528 22354661 -63634273 + MER117 DNA MER1_type 1 149 -48 29 101 0 0 chr18 22355240 22355339 -63633595 + AT_rich Low_complexity Low_complexity 1 99 0 918 220 38 5 chr18 22356660 22356869 -63632065 + LTR33 LTR ERVL 1 216 -305 875 261 94 13 chr18 22356978 22357332 -63631602 + MLT1J2 LTR MaLR 59 408 -1 324 0 0 0 chr18 22358196 22358232 -63630702 + (A)n Simple_repeat Simple_repeat 1 36 0 553 266 23 0 chr18 22358605 22358733 -63630201 - MLT1J2 LTR MaLR -131 319 189 26 30 0 0 chr18 22359245 22359278 -63629656 + AT_rich Low_complexity Low_complexity 1 33 0 2226 133 0 0 chr18 22359850 22360152 -63628782 - AluSx SINE Alu -10 302 1 2189 123 27 0 chr18 22360218 22360518 -63628416 - AluSx SINE Alu -4 308 1 227 335 85 11 chr18 22360753 22360929 -63628005 + L2 LINE L2 2182 2370 -944 295 286 78 0 chr18 22362440 22362517 -63626417 + MER117 DNA MER1_type 68 150 -47 30 27 0 0 chr18 22362836 22362873 -63626061 + AT_rich Low_complexity Low_complexity 1 37 0 526 68 0 0 chr18 22363286 22363359 -63625575 - L1MB4 LINE L1 -3 6177 6105 2923 255 66 36 chr18 22363558 22365075 -63623859 + L1ME2 LINE L1 78 1614 -4466 2201 112 7 3 chr18 22365118 22365413 -63623521 + AluSx SINE Alu 1 296 -16 6027 160 44 25 chr18 22365417 22366128 -63622806 + L1PA16 LINE L1 4124 4821 -1345 2178 124 16 0 chr18 22366128 22366434 -63622500 - AluSx SINE Alu 0 312 2 6027 160 44 25 chr18 22366434 22367714 -63621220 + L1PA16 LINE L1 4821 6156 -10 1555 245 89 51 chr18 22367939 22368768 -63620166 + L1ME2 LINE L1 1726 2531 -3549 * 2668 210 47 57 chr18 22368754 22369042 -63619892 + L1ME2 LINE L1 5040 5329 -769 2468 46 0 0 chr18 22369042 22369324 -63619610 + AluY SINE Alu 1 310 0 220 36 0 0 chr18 22369324 22369352 -63619582 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2668 210 47 57 chr18 22369352 22370108 -63618826 + L1ME2 LINE L1 5329 6064 -34 338 285 76 13 chr18 22370181 22370262 -63618672 + L1MC4 LINE L1 7827 7901 -141 186 103 0 0 chr18 22370262 22370291 -63618643 + (TGGA)n Simple_repeat Simple_repeat 1 29 0 338 285 76 13 chr18 22370291 22370367 -63618567 + L1MC4 LINE L1 7901 7994 -48 2282 109 0 0 chr18 22370607 22370900 -63618034 - AluSg SINE Alu -15 295 3 273 324 81 29 chr18 22372271 22372444 -63616490 + MIR SINE MIR 75 256 -6 1945 142 0 7 chr18 22372501 22372789 -63616145 + AluSx SINE Alu 1 286 -26 183 42 0 0 chr18 22374030 22374054 -63614880 + (CCCCCA)n Simple_repeat Simple_repeat 2 25 0 299 177 48 0 chr18 22374691 22374753 -63614181 - MER116 DNA Mariner 0 80 16 2360 97 3 0 chr18 22375404 22375702 -63613232 - AluSp SINE Alu -14 299 1 462 140 112 0 chr18 22376459 22376566 -63612368 - LTR16C LTR ERVL 0 491 373 356 244 37 52 chr18 22376601 22376736 -63612198 - LTR16C LTR ERVL -280 211 79 470 295 39 6 chr18 22376796 22376952 -63611982 - L2 LINE L2 -2 3311 3151 1414 234 92 35 chr18 22377462 22377842 -63611092 - L2 LINE L2 -172 3141 2784 198 0 0 0 chr18 22377842 22377864 -63611070 + (GAGAA)n Simple_repeat Simple_repeat 1 22 0 1414 234 92 35 chr18 22377864 22378124 -63610810 - L2 LINE L2 -529 2784 2393 668 239 86 20 chr18 22378126 22378381 -63610553 - L2 LINE L2 -1809 1505 1234 233 187 53 27 chr18 22378701 22378776 -63610158 - L2 LINE L2 0 3272 3196 240 200 0 0 chr18 22378883 22378933 -63610001 + GA-rich Low_complexity Low_complexity 2 51 0 198 242 10 81 chr18 22378941 22379040 -63609894 - L2 LINE L2 -215 3057 2966 738 194 26 63 chr18 22379152 22379343 -63609591 + MER91B DNA MER1_type 3 186 -4 379 342 43 26 chr18 22379369 22379600 -63609334 - L2 LINE L2 -520 2794 2560 1690 231 32 48 chr18 22379923 22380447 -63608487 - MER34 LTR ERV1 0 542 27 2019 127 17 0 chr18 22380838 22381151 -63607783 + AluSx SINE Alu 1 312 0 421 257 26 9 chr18 22381245 22381358 -63607576 + MIR SINE MIR 7 121 -141 1949 162 37 12 chr18 22381511 22381912 -63607022 - Charlie1 DNA MER1_type -8 2753 2343 332 246 29 0 chr18 22381916 22381985 -63606949 - Charlie1 DNA MER1_type -2689 72 2 389 268 63 0 chr18 22382583 22382710 -63606224 - MIR SINE MIR -36 226 92 764 284 92 13 chr18 22383025 22383122 -63605812 - L1MC4 LINE L1 -24 8018 7930 225 0 0 0 chr18 22383122 22383147 -63605787 + (CA)n Simple_repeat Simple_repeat 2 26 0 764 284 92 13 chr18 22383147 22383429 -63605505 - L1MC4 LINE L1 -112 7930 7609 2672 52 0 3 chr18 22383463 22383771 -63605163 - AluY SINE Alu -4 307 1 216 158 0 0 chr18 22384853 22384891 -63604043 + (TGGA)n Simple_repeat Simple_repeat 4 41 0 218 381 0 10 chr18 22385016 22385113 -63603821 + MIR SINE MIR 47 142 -120 1223 229 55 138 chr18 22385521 22385641 -63603293 - L1MC4 LINE L1 0 8042 7914 261 0 0 0 chr18 22385641 22385670 -63603264 + (CA)n Simple_repeat Simple_repeat 2 30 0 1223 229 55 138 chr18 22385670 22386181 -63602753 - L1MC4 LINE L1 -128 7914 7496 1957 119 0 0 chr18 22386181 22386450 -63602484 - AluSx SINE Alu -12 300 32 1223 229 55 138 chr18 22386450 22386659 -63602275 - L1MC4 LINE L1 -546 7496 7271 21 36 0 0 chr18 22386659 22386687 -63602247 + AT_rich Low_complexity Low_complexity 1 28 0 2091 71 0 23 chr18 22387098 22387364 -63601570 + AluY SINE Alu 37 296 -15 382 311 46 46 chr18 22389395 22389614 -63599320 + LTR67 LTR ERVL 96 314 -243 265 302 65 45 chr18 22389774 22390019 -63598915 + L2 LINE L2 1326 1575 -1739 194 257 54 27 chr18 22390240 22390314 -63598620 + L2 LINE L2 2213 2288 -1026 393 327 19 13 chr18 22392105 22392264 -63596670 + MIR SINE MIR 2 161 -101 479 301 88 37 chr18 22393802 22394018 -63594916 - MLT1I LTR MaLR 0 409 183 345 311 0 0 chr18 22394326 22394416 -63594518 - MER5A DNA MER1_type -7 182 93 550 229 18 0 chr18 22394521 22394630 -63594304 - MER81 DNA DNA -3 111 1 2116 134 45 25 chr18 22394703 22395060 -63593874 + THE1B LTR MaLR 1 364 0 562 345 61 4 chr18 22395421 22395650 -63593284 - MIR SINE MIR -6 256 15 327 253 221 13 chr18 22396098 22396252 -63592682 + MER5A DNA MER1_type 4 189 0 1301 105 50 10 chr18 22396388 22396588 -63592346 - L1PA16 LINE L1 -1 6165 5958 2401 95 7 0 chr18 22397656 22397962 -63590972 + AluSx SINE Alu 3 310 -2 481 235 128 11 chr18 22398473 22398652 -63590282 + MIR SINE MIR 29 228 -34 250 285 81 41 chr18 22399010 22399133 -63589801 - L2 LINE L2 0 3272 3145 405 39 0 0 chr18 22399157 22399208 -63589726 + (CA)n Simple_repeat Simple_repeat 2 52 0 2367 103 0 0 chr18 22399267 22399567 -63589367 - AluSx SINE Alu -7 305 6 640 263 62 44 chr18 22399690 22400028 -63588906 - LTR33 LTR ERVL -37 484 141 1866 160 0 16 chr18 22400286 22400598 -63588336 + AluJo SINE Alu 1 307 -5 624 183 0 32 chr18 22400619 22400696 -63588238 + MER5C DNA MER1_type 1 79 -245 2022 123 3 0 chr18 22400696 22400980 -63587954 + AluSx SINE Alu 1 285 -27 309 26 0 0 chr18 22400980 22401018 -63587916 + (CAAT)n Simple_repeat Simple_repeat 2 39 0 624 183 0 32 chr18 22401018 22401065 -63587869 + MER5C DNA MER1_type 77 122 -202 2273 125 0 3 chr18 22401177 22401490 -63587444 - AluSx SINE Alu 0 312 1 35 24 0 0 chr18 22401689 22401731 -63587203 + AT_rich Low_complexity Low_complexity 1 42 0 2454 61 0 3 chr18 22401732 22402025 -63586909 + AluY SINE Alu 2 293 -18 814 132 8 8 chr18 22402037 22402166 -63586768 - FLAM_C SINE Alu 0 133 5 2071 122 0 0 chr18 22402806 22403085 -63585849 + AluSx SINE Alu 1 279 -33 207 100 0 0 chr18 22403087 22403117 -63585817 + (TAGG)n Simple_repeat Simple_repeat 1 30 0 227 320 8 16 chr18 22403448 22403570 -63585364 + L2 LINE L2 2943 3063 -209 1613 167 18 33 chr18 22403702 22403978 -63584956 + AluJo SINE Alu 14 285 -27 1603 120 162 0 chr18 22407074 22407333 -63581601 - AluSx SINE Alu -1 301 1 2146 106 11 3 chr18 22408429 22408736 -63580198 - AluSx SINE Alu 0 309 1 229 143 95 0 chr18 22408785 22408827 -63580107 - MER58B DNA MER1_type 0 341 296 249 19 19 77 chr18 22408849 22408901 -63580033 + (TTATA)n Simple_repeat Simple_repeat 3 51 0 29 98 0 0 chr18 22408926 22409018 -63579916 + AT_rich Low_complexity Low_complexity 1 92 0 406 26 0 65 chr18 22409058 22409135 -63579799 + (TA)n Simple_repeat Simple_repeat 1 72 0 1280 209 51 0 chr18 22409148 22409382 -63579552 - AluJo SINE Alu -22 290 45 358 184 17 69 chr18 22409404 22409578 -63579356 + (TA)n Simple_repeat Simple_repeat 1 165 0 * 421 246 0 63 chr18 22409507 22409698 -63579236 + (CATA)n Simple_repeat Simple_repeat 2 180 0 414 250 0 62 chr18 22409716 22409908 -63579026 + (CATA)n Simple_repeat Simple_repeat 1 180 0 347 253 0 62 chr18 22409923 22410085 -63578849 + (CATA)n Simple_repeat Simple_repeat 2 153 0 380 78 26 60 chr18 22410098 22410214 -63578720 + (TA)n Simple_repeat Simple_repeat 1 112 0 958 184 89 66 chr18 22410275 22410379 -63578555 - MER58B DNA MER1_type -2109 311 211 1716 148 46 14 chr18 22410379 22410662 -63578272 + AluJo SINE Alu 1 292 -20 958 184 89 66 chr18 22410662 22410784 -63578150 - MER58B DNA MER1_type -2209 211 74 1346 218 53 0 chr18 22410784 22411050 -63577884 + AluJo SINE Alu 3 282 -30 958 184 89 66 chr18 22411050 22411126 -63577808 - MER58B DNA MER1_type -2346 74 1 677 97 0 142 chr18 22411405 22411560 -63577374 - FLAM_C SINE Alu 0 133 1 2030 137 31 0 chr18 22411735 22412027 -63576907 + AluSq SINE Alu 1 301 -12 1097 75 8 0 chr18 22412065 22412199 -63576735 + AluSq/x SINE Alu 1 135 -178 2356 84 3 0 chr18 22412199 22412495 -63576439 + AluY SINE Alu 1 297 -14 1988 141 3 16 chr18 22412625 22412937 -63575997 + AluSx SINE Alu 1 308 -4 2280 104 0 3 chr18 22414401 22414700 -63574234 - AluSx SINE Alu -14 298 1 1597 156 4 36 chr18 22415123 22415399 -63573535 + AluJb SINE Alu 2 268 -44 182 37 37 0 chr18 22415427 22415454 -63573480 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 864 152 0 0 chr18 22415462 22415594 -63573340 - FLAM_C SINE Alu -1 132 1 2222 98 0 7 chr18 22415625 22415911 -63573023 - AluSc SINE Alu -25 284 1 25 0 0 0 chr18 22416033 22416058 -63572876 + AT_rich Low_complexity Low_complexity 1 25 0 3459 148 18 85 chr18 22416532 22417000 -63571934 - LTR8 LTR ERV1 0 691 290 1588 112 143 8 chr18 22417000 22417259 -63571675 - AluSg SINE Alu -16 294 1 3459 148 18 85 chr18 22417259 22417531 -63571403 - LTR8 LTR ERV1 -401 290 1 512 267 224 5 chr18 22417866 22418076 -63570858 - L2 LINE L2 0 3272 3017 955 156 32 0 chr18 22419236 22419390 -63569544 - FRAM SINE Alu -17 159 1 368 243 0 0 chr18 22419426 22419496 -63569438 + Charlie1a DNA MER1_type 7 76 -1379 948 149 0 0 chr18 22419498 22419632 -63569302 + AluJo SINE Alu 1 134 -178 1541 188 0 34 chr18 22419689 22419981 -63568953 + AluJo SINE Alu 1 282 -30 1137 161 12 158 chr18 22419995 22420282 -63568652 + Charlie1a DNA MER1_type 95 422 -2339 2360 84 0 0 chr18 22420282 22420568 -63568366 + AluSx SINE Alu 1 286 -26 193 77 0 0 chr18 22420568 22420594 -63568340 + (TAA)n Simple_repeat Simple_repeat 2 180 0 1137 161 12 158 chr18 22420594 22420607 -63568327 + Charlie1a DNA MER1_type 422 435 -2326 1357 173 122 11 chr18 22420607 22420878 -63568056 + AluJo SINE Alu 1 301 -11 2170 142 0 0 chr18 22420888 22421197 -63567737 + AluSx SINE Alu 1 309 -3 1137 161 12 158 chr18 22421197 22421280 -63567654 + Charlie1a DNA MER1_type 445 538 -2223 2216 95 0 0 chr18 22421280 22421575 -63567359 + AluSc SINE Alu 1 295 -14 1131 180 114 84 chr18 22421580 22421969 -63566965 - LTR47A LTR ERVL 0 452 47 2191 101 3 0 chr18 22421969 22422265 -63566669 + AluSx SINE Alu 3 299 -13 1131 180 114 84 chr18 22422265 22422314 -63566620 - LTR47A LTR ERVL -405 47 1 1137 161 12 158 chr18 22422314 22422392 -63566542 + Charlie1a DNA MER1_type 413 501 -954 2942 152 113 10 chr18 22422393 22422453 -63566481 + Charlie1a DNA MER1_type 662 714 -2047 2142 112 0 7 chr18 22422453 22422758 -63566176 - AluSx SINE Alu -9 303 1 2942 152 113 10 chr18 22422758 22423315 -63565619 + Charlie1a DNA MER1_type 714 1343 -112 826 125 0 0 chr18 22423353 22423465 -63565469 - AluJb SINE Alu -194 118 7 388 197 26 0 chr18 22423497 22423573 -63565361 + Charlie1a DNA MER1_type 1377 1454 -1 2170 98 3 0 chr18 22423775 22424070 -63564864 + AluSx SINE Alu 3 298 -14 1686 156 45 0 chr18 22424152 22424441 -63564493 + AluJb SINE Alu 1 302 -10 336 336 40 24 chr18 22424457 22424582 -63564352 - L2 LINE L2 -3 3269 3143 1547 142 59 17 chr18 22427854 22428142 -63560792 + AluJb SINE Alu 10 309 -3 454 224 20 95 chr18 22428147 22428294 -63560640 - MIR SINE MIR -6 256 121 471 296 135 29 chr18 22428426 22428550 -63560384 - L2 LINE L2 -742 2572 2463 2019 186 71 102 chr18 22428550 22429130 -63559804 - MER68 LTR ERV1 0 562 1 471 296 135 29 chr18 22429130 22429390 -63559544 - L2 LINE L2 -851 2463 2147 564 101 13 0 chr18 22429425 22429504 -63559430 + FLAM_A SINE Alu 40 119 -23 2169 98 0 3 chr18 22429769 22430074 -63558860 + AluSg SINE Alu 1 304 -6 1734 173 3 0 chr18 22430413 22430708 -63558226 - AluJb SINE Alu -16 296 1 1607 161 39 7 chr18 22431122 22431407 -63557527 + AluJb SINE Alu 1 294 -18 1964 125 0 0 chr18 22431452 22431739 -63557195 + AluSx SINE Alu 1 287 -25 203 59 0 29 chr18 22431742 22431776 -63557158 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 1474 208 91 77 chr18 22432359 22432773 -63556161 + L1ME3 LINE L1 5648 6055 -107 2322 163 100 24 chr18 22432773 22433051 -63555883 + MLT1F LTR MaLR 1 257 -285 2258 97 0 0 chr18 22433051 22433351 -63555583 - AluSx SINE Alu -12 300 1 2322 163 100 24 chr18 22433351 22433574 -63555360 + MLT1F LTR MaLR 257 540 -2 1474 208 91 77 chr18 22433574 22433601 -63555333 + L1ME3 LINE L1 6055 6080 -82 1707 169 3 3 chr18 22433601 22433902 -63555032 + AluSx SINE Alu 1 301 -11 1474 208 91 77 chr18 22433902 22433965 -63554969 + L1ME3 LINE L1 6080 6160 -2 768 141 137 93 chr18 22434285 22434533 -63554401 - ORSL DNA AcHobo -16 259 1 1365 200 33 80 chr18 22434547 22434912 -63554022 + MLT1A2 LTR MaLR 1 348 -26 23 54 0 0 chr18 22435115 22435152 -63553782 + AT_rich Low_complexity Low_complexity 1 37 0 837 208 13 0 chr18 22435186 22435340 -63553594 + AluJb SINE Alu 133 288 -24 2098 103 3 29 chr18 22435447 22435615 -63553319 - AluSx SINE Alu -10 302 131 2159 105 0 0 chr18 22435615 22435911 -63553023 - AluSc SINE Alu -13 296 1 1948 101 4 4 chr18 22435916 22436184 -63552750 - AluSq SINE Alu -45 268 1 2098 103 3 29 chr18 22436184 22436319 -63552615 - AluSx SINE Alu -185 127 1 22 56 0 0 chr18 22436321 22436357 -63552577 + AT_rich Low_complexity Low_complexity 1 36 0 376 239 156 82 chr18 22436372 22436523 -63552411 + L1ME LINE L1 5518 5695 -426 1605 130 111 0 chr18 22436523 22436785 -63552149 + AluJb SINE Alu 1 291 -21 376 239 156 82 chr18 22436785 22436876 -63552058 + L1ME LINE L1 5695 5778 -343 1797 162 0 9 chr18 22437115 22437430 -63551504 + AluSx SINE Alu 1 312 0 1400 188 55 11 chr18 22437899 22438170 -63550764 + MER39 LTR ERV1 4 286 -421 1064 149 35 40 chr18 22438171 22438372 -63550562 - AluJo SINE Alu -27 285 86 406 200 0 0 chr18 22438372 22438447 -63550487 - MER5A DNA MER1_type -114 75 1 195 42 0 0 chr18 22439110 22439134 -63549800 + (CCCCG)n Simple_repeat Simple_repeat 4 27 0 248 310 66 22 chr18 22440277 22440453 -63548481 - MIR SINE MIR -42 220 36 461 94 0 0 chr18 22440779 22440843 -63548091 + AluJb SINE Alu 52 115 -197 592 163 0 0 chr18 22440873 22440971 -63547963 + AluJb SINE Alu 210 307 -5 729 174 28 51 chr18 22441023 22441201 -63547733 - FRAM SINE Alu -2 174 1 1692 123 58 0 chr18 22441242 22441518 -63547416 - AluSq SINE Alu -21 292 1 317 198 79 59 chr18 22442739 22442840 -63546094 + MIR SINE MIR 40 142 -66 1721 164 14 0 chr18 22442979 22443271 -63545663 - AluJo SINE Alu -10 302 7 1845 136 0 13 chr18 22443284 22443586 -63545348 - AluJb SINE Alu -14 298 1 698 59 69 0 chr18 22443984 22444086 -63544848 + HY1 scRNA scRNA 1 109 -3 369 145 29 0 chr18 22444373 22444442 -63544492 + L1MB7 LINE L1 6105 6175 -9 411 230 160 34 chr18 22444537 22444694 -63544240 - MIR SINE MIR -63 145 23 218 261 68 45 chr18 22444986 22445074 -63543860 + MIR3 SINE MIR 73 162 -46 197 330 121 11 chr18 22445837 22445928 -63543006 + MIR SINE MIR 41 141 -121 2216 76 17 0 chr18 22446208 22446497 -63542437 - AluY SINE Alu -17 294 1 660 223 108 0 chr18 22447744 22447910 -63541024 + MIR SINE MIR 18 201 -61 6910 127 137 116 chr18 22447910 22449570 -63539364 + pTR5 LTR ERV1 743 2438 0 1557 149 0 79 chr18 22449675 22449853 -63539081 - AluJb SINE Alu -21 291 147 2177 103 10 3 chr18 22449853 22450164 -63538770 - AluSp SINE Alu 0 313 1 1557 149 0 79 chr18 22450164 22450301 -63538633 - AluJb SINE Alu -165 147 1 243 0 0 0 chr18 22450309 22450336 -63538598 + (T)n Simple_repeat Simple_repeat 1 27 0 305 261 80 85 chr18 22450481 22450657 -63538277 - MIR SINE MIR 0 262 88 1374 192 7 36 chr18 22453246 22453553 -63535381 - AluJb SINE Alu -14 298 1 215 200 30 10 chr18 22454131 22454231 -63534703 + (TA)n Simple_repeat Simple_repeat 1 102 0 1231 172 48 76 chr18 22454259 22454426 -63534508 - AluJb SINE Alu -30 282 125 1948 130 13 13 chr18 22454426 22454733 -63534201 - AluSx SINE Alu -5 307 1 1231 172 48 76 chr18 22454733 22454855 -63534079 - AluJb SINE Alu -187 125 1 192 250 25 0 chr18 22456037 22456077 -63532857 + L2 LINE L2 3180 3220 -93 1659 147 18 11 chr18 22456497 22456769 -63532165 + AluJo SINE Alu 15 288 -24 22 70 0 0 chr18 22458000 22458043 -63530891 + AT_rich Low_complexity Low_complexity 1 43 0 457 313 46 58 chr18 22458176 22458505 -63530429 + L1ME LINE L1 5410 5734 -432 4182 137 87 19 chr18 22458506 22459349 -63529585 + L1MC1 LINE L1 5186 6088 -245 21 36 0 0 chr18 22459511 22459539 -63529395 + AT_rich Low_complexity Low_complexity 1 28 0 554 178 0 0 chr18 22459559 22459649 -63529285 - AluJ/FLAM SINE Alu -221 91 2 23 33 0 0 chr18 22459658 22459688 -63529246 + AT_rich Low_complexity Low_complexity 1 30 0 1171 187 111 34 chr18 22459729 22459991 -63528943 - AluJo SINE Alu -30 282 1 299 218 293 21 chr18 22460121 22460309 -63528625 + L1MEd LINE L1 987 1225 -4894 446 193 123 0 chr18 22460322 22460436 -63528498 + L1M4 LINE L1 4307 4434 -1712 2090 101 3 32 chr18 22460456 22460772 -63528162 + AluSc SINE Alu 1 307 -2 1694 153 30 24 chr18 22460886 22461181 -63527753 - AluSx SINE Alu -14 298 2 610 296 9 42 chr18 22461442 22461655 -63527279 + MIR3 SINE MIR 3 208 0 265 182 0 55 chr18 22461648 22461703 -63527231 - L2 LINE L2 -1 3312 3261 * 329 275 297 1 chr18 22463963 22464118 -63524816 + MIR SINE MIR 58 259 -3 622 324 115 9 chr18 22464888 22465228 -63523706 - L3 LINE CR1 -1 1576 1201 1299 201 0 4 chr18 22465240 22465499 -63523435 - AluSx SINE Alu -1 311 54 1402 197 48 0 chr18 22466264 22466533 -63522401 + AluJo SINE Alu 1 282 -30 2224 95 0 0 chr18 22467591 22467886 -63521048 - AluSg SINE Alu -15 295 1 315 122 0 0 chr18 22467928 22467977 -63520957 + (TCCCC)n Simple_repeat Simple_repeat 1 49 0 981 191 242 0 chr18 22467977 22468208 -63520726 - AluJo SINE Alu -15 287 1 1171 175 44 0 chr18 22468351 22468602 -63520332 + L1PB1 LINE L1 5068 5329 -817 1949 139 7 0 chr18 22468604 22468913 -63520021 + AluSq SINE Alu 1 311 -2 2121 114 0 3 chr18 22470111 22470410 -63518524 + AluSx SINE Alu 1 298 -14 284 73 0 0 chr18 22471218 22471259 -63517675 - L1ME4a LINE L1 -4 6117 6077 * 2672 117 3 0 chr18 22471250 22471636 -63517298 + L1PB1 LINE L1 5763 6149 -2 564 313 24 9 chr18 22471658 22471869 -63517065 - MIR SINE MIR -4 258 45 453 289 117 29 chr18 22471911 22472329 -63516605 - L1ME4a LINE L1 -71 6050 5596 236 378 61 28 chr18 22473231 22473579 -63515355 - L2 LINE L2 -214 3058 2702 216 367 72 6 chr18 22473713 22473893 -63515041 - L2 LINE L2 -661 2653 2462 544 178 47 19 chr18 22473925 22474032 -63514902 + MER63 DNA MER1_type 27 762 -74 * 633 277 81 44 chr18 22473997 22474268 -63514666 + MLT1J2 LTR MaLR 118 398 -52 353 68 0 135 chr18 22474269 22474343 -63514591 - MLT2D LTR ERVL -1 413 366 1727 169 0 3 chr18 22474350 22474645 -63514289 - AluJo SINE Alu -16 296 3 2131 95 3 7 chr18 22474880 22475176 -63513758 + AluSc SINE Alu 13 307 -2 453 184 0 156 chr18 22475426 22475567 -63513367 - L2 LINE L2 -3 3310 3192 543 234 9 0 chr18 22476171 22476305 -63512629 - FLAM_A SINE Alu 0 138 4 933 316 47 35 chr18 22476324 22476729 -63512205 - LTR16C LTR ERVL 0 491 82 2220 87 3 0 chr18 22477653 22477941 -63510993 + AluSg SINE Alu 1 289 -21 624 150 124 0 chr18 22478049 22478162 -63510772 - FLAM_C SINE Alu -6 127 1 305 283 85 9 chr18 22478274 22478380 -63510554 + L1MEd LINE L1 965 1078 -5041 251 156 117 39 chr18 22478403 22478480 -63510454 + L1MEd LINE L1 1143 1225 -4894 4058 187 63 28 chr18 22478493 22478630 -63510304 + L1MB8 LINE L1 4307 4438 -1740 2140 103 3 3 chr18 22478630 22478931 -63510003 + AluSc SINE Alu 1 301 -8 4058 187 63 28 chr18 22478931 22479661 -63509273 + L1MB8 LINE L1 4438 5141 -1037 1438 159 74 0 chr18 22479661 22479931 -63509003 + AluJo SINE Alu 1 290 -22 4058 187 63 28 chr18 22479931 22480000 -63508934 + L1MB8 LINE L1 5141 5206 -972 2196 93 17 0 chr18 22480000 22480301 -63508633 + AluSx SINE Alu 1 306 -6 4058 187 63 28 chr18 22480301 22480576 -63508358 + L1MB8 LINE L1 5206 5470 -708 1501 175 34 4 chr18 22480576 22480844 -63508090 + AluJb SINE Alu 1 276 -36 4058 187 63 28 chr18 22480844 22481408 -63507526 + L1MB8 LINE L1 5470 6157 -21 808 173 0 62 chr18 22481421 22481583 -63507351 - AluJo SINE Alu -159 153 2 315 297 157 0 chr18 22481583 22481768 -63507166 + L1MEd LINE L1 1347 1560 -4750 2288 84 0 0 chr18 22481971 22482280 -63506654 - AluY SINE Alu -2 309 1 1402 197 48 0 chr18 22482987 22483256 -63505678 + AluJo SINE Alu 1 282 -30 2003 121 0 26 chr18 22484314 22484620 -63504314 - AluSq SINE Alu -15 298 1 652 176 15 37 chr18 22484651 22484787 -63504147 + FLAM_C SINE Alu 1 133 0 4181 194 117 28 chr18 22484896 22485007 -63503927 - L1MC4a LINE L1 0 7808 7708 4681 39 0 4 chr18 22485007 22485568 -63503366 + L1PA4 LINE L1 5597 6155 0 4181 194 117 28 chr18 22485568 22486509 -63502425 - L1MC4a LINE L1 -100 7708 6662 1880 75 56 11 chr18 22486524 22486814 -63502120 - AluSc SINE Alu 0 302 1 250 330 23 0 chr18 22487262 22487350 -63501584 - L2 LINE L2 -44 3228 3139 2224 98 0 0 chr18 22489665 22489962 -63498972 - AluSx SINE Alu -15 297 1 321 256 256 24 chr18 22489963 22490213 -63498721 - L2 LINE L2 -107 3206 2899 276 326 74 47 chr18 22491668 22491858 -63497076 + L2 LINE L2 2600 2794 -520 693 180 33 0 chr18 22491984 22492106 -63496828 - FLAM_A SINE Alu -7 126 1 272 318 47 30 chr18 22493389 22493500 -63495434 + L1MC4a LINE L1 4911 5019 -1127 2279 80 0 17 chr18 22493500 22493802 -63495132 + AluY SINE Alu 1 297 -14 272 318 47 30 chr18 22493802 22493926 -63495008 + L1MC4a LINE L1 5019 5150 -996 1802 120 18 0 chr18 22493983 22494257 -63494677 + AluJb SINE Alu 17 295 -17 1444 106 5 18 chr18 22494319 22494536 -63494398 + AluSg/x SINE Alu 86 299 -13 1931 146 0 3 chr18 22494622 22494923 -63494011 - AluSx SINE Alu -12 300 1 824 176 0 0 chr18 22494957 22495093 -63493841 + AluJb SINE Alu 176 311 -1 228 308 44 0 chr18 22495099 22495190 -63493744 + L1MC4a LINE L1 5558 5652 -469 1619 173 7 0 chr18 22495190 22495468 -63493466 + AluJb SINE Alu 1 280 -32 467 301 238 4 chr18 22495504 22495773 -63493161 + L1MC4a LINE L1 5641 5972 -1836 1690 172 10 3 chr18 22496514 22496822 -63492112 - AluJb SINE Alu -2 310 1 300 238 0 0 chr18 22497100 22497163 -63491771 - L1MB8 LINE L1 -6 6172 6110 679 188 47 8 chr18 22497163 22497291 -63491643 + FLAM_C SINE Alu 1 133 0 3362 175 55 12 chr18 22497310 22497985 -63490949 - L1MB7 LINE L1 -58 6126 5423 2268 107 0 0 chr18 22498005 22498315 -63490619 - AluSx SINE Alu -2 310 1 1430 192 23 10 chr18 22498394 22498696 -63490238 + AluJo SINE Alu 1 306 -6 2068 113 0 3 chr18 22498738 22499040 -63489894 + AluSx SINE Alu 1 301 -11 23 0 0 0 chr18 22500692 22500715 -63488219 + AT_rich Low_complexity Low_complexity 1 23 0 2326 96 0 3 chr18 22500927 22501240 -63487694 - AluSx SINE Alu 0 312 1 609 231 164 128 chr18 22501886 22502393 -63486541 - Charlie8 DNA MER1_type -1884 533 9 289 68 23 0 chr18 22503421 22503465 -63485469 - L1MD3 LINE L1 -13 7982 7938 601 257 20 7 chr18 22503466 22503618 -63485316 - MIR SINE MIR -106 156 3 408 266 85 14 chr18 22506578 22506800 -63482134 - MIR SINE MIR -3 259 21 2111 97 0 26 chr18 22506910 22507219 -63481715 + AluSx SINE Alu 1 301 -11 1427 109 14 9 chr18 22510481 22510692 -63478242 + AluSx SINE Alu 1 212 -100 992 197 74 29 chr18 22511598 22511842 -63477092 + AluJb SINE Alu 33 287 -25 562 152 172 0 chr18 22511851 22511950 -63476984 - FLAM_C SINE Alu -26 117 2 2100 101 14 0 chr18 22512999 22513285 -63475649 + AluSg SINE Alu 1 290 -20 1131 82 0 0 chr18 22515257 22515403 -63473531 + AluSp SINE Alu 150 295 -18 390 237 11 11 chr18 22515425 22515518 -63473416 - MER5A DNA MER1_type -88 101 9 733 161 23 8 chr18 22516709 22516839 -63472095 + FLAM_C SINE Alu 2 133 -10 1531 160 7 52 chr18 22516881 22517187 -63471747 - AluJb SINE Alu -20 292 1 352 234 12 114 chr18 22518165 22518332 -63470602 - MER105 DNA DNA -3 201 52 293 104 42 0 chr18 22518365 22518413 -63470521 - MER105 DNA DNA -129 75 26 1119 120 0 120 chr18 22518523 22518566 -63470368 + AluJo SINE Alu 92 139 -173 2195 85 0 0 chr18 22518566 22518849 -63470085 + AluSc SINE Alu 1 283 -26 1119 120 0 120 chr18 22518849 22519030 -63469904 + AluJo SINE Alu 139 289 -23 2455 59 10 0 chr18 22519043 22519347 -63469587 + AluSp SINE Alu 1 307 -6 1402 160 33 69 chr18 22520554 22520860 -63468074 - AluJo SINE Alu -17 295 1 308 192 19 0 chr18 22521254 22521306 -63467628 + MER5B DNA MER1_type 126 178 0 1597 76 44 22 chr18 22521692 22521917 -63467017 + MER30 DNA MER1_type 1 230 0 899 128 6 51 chr18 22522420 22522576 -63466358 + MLT1B LTR MaLR 186 334 -56 231 240 20 0 chr18 22523120 22523135 -63465799 + AluSg/x SINE Alu 120 135 -167 1302 149 53 93 chr18 22523135 22523272 -63465662 + AluSx SINE Alu 1 142 -170 1680 87 0 10 chr18 22523272 22523480 -63465454 + AluSx SINE Alu 1 206 -106 1302 149 53 93 chr18 22523480 22523663 -63465271 + AluSx SINE Alu 142 308 -4 951 179 12 0 chr18 22523663 22523825 -63465109 + AluSg/x SINE Alu 134 297 -15 2090 135 0 0 chr18 22524756 22525053 -63463881 - AluJb SINE Alu -15 297 1 1748 170 0 13 chr18 22525775 22526081 -63462853 - AluJo SINE Alu -10 302 1 1888 154 13 10 chr18 22526271 22526570 -63462364 + AluJb SINE Alu 1 300 -12 2440 84 0 7 chr18 22526842 22527152 -63461782 + AluSc SINE Alu 2 309 0 2247 130 0 0 chr18 22527263 22527571 -63461363 + AluSx SINE Alu 1 308 -4 1929 118 0 15 chr18 22528481 22528744 -63460190 + AluSx SINE Alu 26 284 -28 241 286 65 45 chr18 22528850 22529004 -63459930 - MIR SINE MIR -13 249 93 1480 76 0 50 chr18 22529717 22529915 -63459019 - AluSq SINE Alu -16 297 110 967 82 8 0 chr18 22529933 22530055 -63458879 - AluSq SINE Alu -189 123 1 4030 171 74 26 chr18 22530280 22530562 -63458372 + L1MB2 LINE L1 5168 5435 -736 189 0 0 0 chr18 22530562 22530583 -63458351 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 4030 171 74 26 chr18 22530583 22531035 -63457899 + L1MB2 LINE L1 5435 5960 -211 2362 100 0 0 chr18 22531035 22531326 -63457608 + AluSx SINE Alu 1 291 -21 4030 171 74 26 chr18 22531326 22531549 -63457385 + L1MB2 LINE L1 5960 6171 0 1616 162 13 55 chr18 22531564 22531873 -63457061 + AluJo SINE Alu 8 303 -9 403 300 197 8 chr18 22531884 22531969 -63456965 + L1MC4a LINE L1 5344 5412 -2396 2291 118 0 0 chr18 22531969 22532273 -63456661 + AluSx SINE Alu 1 304 -8 403 300 197 8 chr18 22532273 22532684 -63456250 + L1MC4a LINE L1 5412 5934 -1874 6100 90 16 16 chr18 22532801 22533629 -63455305 - L1PA14 LINE L1 0 6161 5334 2101 123 3 0 chr18 22533629 22533922 -63455012 - AluSx SINE Alu -18 294 1 6100 90 16 16 chr18 22533922 22533948 -63454986 - L1PA14 LINE L1 -827 5334 5309 1822 163 7 7 chr18 22533948 22534243 -63454691 - AluJb SINE Alu -13 299 5 6100 90 16 16 chr18 22534243 22534273 -63454661 - L1PA14 LINE L1 -851 5310 5276 23 33 0 0 chr18 22534282 22534312 -63454622 + AT_rich Low_complexity Low_complexity 1 30 0 1477 153 24 39 chr18 22534332 22534429 -63454505 + AluJo SINE Alu 40 137 -175 2377 54 14 17 chr18 22534429 22534751 -63454183 + AluSp SINE Alu 1 313 0 1477 153 24 39 chr18 22534751 22534907 -63454027 + AluJo SINE Alu 137 289 -23 25 0 0 0 chr18 22534909 22534934 -63454000 + AT_rich Low_complexity Low_complexity 1 25 0 32 0 0 0 chr18 22535102 22535134 -63453800 + AT_rich Low_complexity Low_complexity 1 32 0 708 149 18 0 chr18 22536905 22537019 -63451915 + AluJb SINE Alu 176 291 -21 21 0 0 0 chr18 22537019 22537040 -63451894 + AT_rich Low_complexity Low_complexity 1 21 0 623 169 65 24 chr18 22537765 22537889 -63451045 + FLAM_C SINE Alu 1 129 -14 28 29 0 0 chr18 22537889 22537924 -63451010 + AT_rich Low_complexity Low_complexity 1 35 0 813 166 25 18 chr18 22537941 22538104 -63450830 + L1MA10 LINE L1 6169 6332 -2 2458 84 0 0 chr18 22538106 22538405 -63450529 - AluSx SINE Alu -13 299 1 2096 106 0 14 chr18 22538928 22539220 -63449714 + AluSx SINE Alu 1 288 -24 379 276 10 0 chr18 22539323 22539421 -63449513 + MER94 DNA DNA 5 103 -31 204 97 0 0 chr18 22540458 22540489 -63448445 + (CGGGA)n Simple_repeat Simple_repeat 2 32 0 38 0 0 0 chr18 22540677 22540715 -63448219 + GC_rich Low_complexity Low_complexity 1 38 0 702 276 50 85 chr18 22541240 22541772 -63447162 - MER34 LTR ERV1 -21 623 3 1085 153 109 26 chr18 22541860 22542089 -63446845 - AluJb SINE Alu -13 299 52 2298 98 0 19 chr18 22542121 22542437 -63446497 - AluSq SINE Alu -3 310 1 1965 147 59 4 chr18 22542437 22542872 -63446062 - L1MB2 LINE L1 -41 6130 5601 227 300 0 25 chr18 22542934 22543014 -63445920 - L2 LINE L2 -997 2317 2240 243 0 0 0 chr18 22543627 22543654 -63445280 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2125 84 11 31 chr18 22543654 22543941 -63444993 - AluSp SINE Alu -32 281 1 2279 88 0 36 chr18 22544014 22544321 -63444613 + AluSq SINE Alu 1 296 -17 638 93 0 56 chr18 22544359 22544466 -63444468 + AluSg/x SINE Alu 207 307 -5 28 0 0 0 chr18 22544646 22544674 -63444260 + AT_rich Low_complexity Low_complexity 1 28 0 1305 132 0 0 chr18 22544674 22544864 -63444070 + AluSg/x SINE Alu 121 310 -2 23 0 0 0 chr18 22545424 22545447 -63443487 + AT_rich Low_complexity Low_complexity 1 23 0 570 236 54 49 chr18 22545449 22545652 -63443282 - MIR SINE MIR -42 220 17 1976 156 0 3 chr18 22545947 22546242 -63442692 + AluSx SINE Alu 1 294 -18 662 236 109 60 chr18 22546767 22547098 -63441836 + L2 LINE L2 1664 2010 -1304 1572 140 37 34 chr18 22547113 22547434 -63441500 - L1MB8 LINE L1 0 6178 5857 1857 152 16 3 chr18 22547434 22547757 -63441177 + L1MB3 LINE L1 5855 6181 -2 2354 103 0 0 chr18 22547866 22548168 -63440766 - AluSx SINE Alu -10 302 1 2481 67 7 0 chr18 22550008 22550307 -63438627 - AluSp SINE Alu -12 301 1 396 281 53 9 chr18 22550674 22550788 -63438146 - MIR SINE MIR -105 157 39 34 42 0 0 chr18 22551550 22551598 -63437336 + AT_rich Low_complexity Low_complexity 1 48 0 204 40 0 0 chr18 22552611 22552636 -63436298 + (GAAA)n Simple_repeat Simple_repeat 4 28 0 663 291 126 58 chr18 22552931 22553033 -63435901 + L1ME3A LINE L1 4146 4240 -1906 2131 134 0 7 chr18 22553033 22553340 -63435594 + AluJb SINE Alu 1 305 -7 663 291 126 58 chr18 22553340 22553351 -63435583 + L1ME3A LINE L1 4240 4249 -1897 1588 139 71 65 chr18 22553351 22553661 -63435273 + AluJo SINE Alu 1 312 0 663 291 126 58 chr18 22553661 22554506 -63434428 + L1ME3A LINE L1 4249 5170 -976 936 148 121 0 chr18 22554510 22554659 -63434275 + AluSg/x SINE Alu 134 300 -12 364 119 17 17 chr18 22554668 22554727 -63434207 + AluJb SINE Alu 64 122 -180 207 0 0 0 chr18 22554727 22554750 -63434184 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1016 261 145 38 chr18 22554839 22555307 -63433627 + MLT1H1 LTR MaLR 13 493 -62 2514 73 3 0 chr18 22555307 22555609 -63433325 - AluSp SINE Alu -10 303 1 1016 261 145 38 chr18 22555609 22555674 -63433260 + MLT1H1 LTR MaLR 493 550 -5 1035 278 83 54 chr18 22555736 22556326 -63432608 + L1ME3A LINE L1 5280 5886 -284 2058 129 25 0 chr18 22556588 22556866 -63432068 + AluJb SINE Alu 1 285 -27 453 180 0 0 chr18 22556870 22556959 -63431975 + (TG)n Simple_repeat Simple_repeat 2 90 0 271 323 45 0 chr18 22557872 22558003 -63430931 - MIR SINE MIR -66 196 59 701 22 0 22 chr18 22558749 22558838 -63430096 - L1PA5 LINE L1 0 6154 6068 279 333 44 19 chr18 22558957 22559116 -63429818 + MIR SINE MIR 30 192 -70 303 302 108 7 chr18 22559156 22559295 -63429639 + MER5A DNA MER1_type 33 185 -4 415 296 153 0 chr18 22559403 22559579 -63429355 - MIR SINE MIR -29 233 31 1792 146 33 26 chr18 22559779 22560081 -63428853 + AluJo SINE Alu 1 304 -8 256 209 66 0 chr18 22560164 22560255 -63428679 + L2 LINE L2 1273 1369 -1945 185 113 141 113 chr18 22560380 22560451 -63428483 + L2 LINE L2 1607 1679 -1635 549 223 8 0 chr18 22560464 22560594 -63428340 + L2 LINE L2 2849 2979 -334 1856 151 0 0 chr18 22561412 22561714 -63427220 + AluJb SINE Alu 5 306 0 478 294 180 9 chr18 22561721 22561932 -63427002 - MIR SINE MIR -12 250 4 3084 133 39 60 chr18 22562096 22562662 -63426272 - MER41C LTR ERV1 0 554 1 241 286 85 37 chr18 22563176 22563331 -63425603 + L2 LINE L2 2875 3036 -277 294 29 0 0 chr18 22563346 22563381 -63425553 + (TC)n Simple_repeat Simple_repeat 2 36 0 407 105 0 0 chr18 22563381 22563438 -63425496 - Alu SINE Alu -248 61 5 354 211 55 78 chr18 22563537 22563665 -63425269 + L2 LINE L2 3181 3305 -8 373 279 6 93 chr18 22563787 22563905 -63425029 - MER76 LTR ERV -30 658 556 2604 53 3 0 chr18 22563905 22564209 -63424725 + AluY SINE Alu 5 309 -2 373 279 6 93 chr18 22564209 22564251 -63424683 - MER76 LTR ERV -132 556 512 2114 158 22 6 chr18 22564266 22564628 -63424306 + MLT1B LTR MaLR 21 388 -2 1407 149 4 56 chr18 22564628 22564877 -63424057 - MER46A DNA MER2_type 0 236 1 1340 214 10 16 chr18 22564890 22565194 -63423740 - MER76 LTR ERV -386 302 1 341 314 16 8 chr18 22565238 22565359 -63423575 - L3b LINE CR1 -198 1385 1264 2113 123 3 0 chr18 22565610 22565895 -63423039 + AluSx SINE Alu 5 290 -22 1955 118 87 0 chr18 22566579 22566866 -63422068 - AluSx SINE Alu 0 312 1 795 199 30 17 chr18 22567107 22567295 -63421639 - MLT1C LTR MaLR 0 492 289 183 286 43 14 chr18 22567567 22567637 -63421297 - L2 LINE L2 -76 3196 3125 849 248 29 33 chr18 22567721 22567963 -63420971 + MIR SINE MIR 1 241 -21 254 254 30 0 chr18 22568378 22568445 -63420489 - MER91A DNA MER1_type -17 179 111 1122 209 59 62 chr18 22568893 22569069 -63419865 + L1M4c LINE L1 1679 1854 -4530 2025 96 63 0 chr18 22569069 22569339 -63419595 - AluSx SINE Alu -20 292 6 1122 209 59 62 chr18 22569339 22569750 -63419184 + L1M4c LINE L1 1854 2369 -4015 378 222 75 92 chr18 22569750 22569834 -63419100 + Charlie7 DNA MER1_type 1929 2013 -599 2308 102 0 0 chr18 22569834 22570137 -63418797 + AluSq SINE Alu 1 303 -10 378 222 75 92 chr18 22570137 22570291 -63418643 + Charlie7 DNA MER1_type 2013 2163 -449 778 243 0 0 chr18 22570293 22570445 -63418489 + MER45A DNA AcHobo 24 175 -3 424 211 172 52 chr18 22570445 22570533 -63418401 + Charlie7 DNA MER1_type 2162 2238 -374 2006 154 0 0 chr18 22570533 22570825 -63418109 + AluJb SINE Alu 1 292 -20 424 211 172 52 chr18 22570825 22571043 -63417891 + Charlie7 DNA MER1_type 2238 2505 -107 516 195 0 0 chr18 22571395 22571482 -63417452 + FLAM_C SINE Alu 37 123 -20 450 0 0 0 chr18 22571482 22571532 -63417402 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 286 95 0 4 chr18 22571537 22571578 -63417356 + AluSg/x SINE Alu 216 250 -52 923 178 0 0 chr18 22571579 22571753 -63417181 + AluJo SINE Alu 86 259 -53 247 234 11 85 chr18 22573417 22573511 -63415423 - MIR3 SINE MIR -27 181 95 3529 189 27 61 chr18 22573631 22574352 -63414582 + L1MB7 LINE L1 4438 5182 -964 2100 126 0 0 chr18 22574352 22574637 -63414297 + AluSx SINE Alu 1 285 -27 189 0 0 0 chr18 22574637 22574658 -63414276 + (CA)n Simple_repeat Simple_repeat 2 22 0 3529 189 27 61 chr18 22574658 22574728 -63414206 + L1MB7 LINE L1 5181 5199 -947 2097 125 27 0 chr18 22574728 22575023 -63413911 + AluSx SINE Alu 1 303 -9 3529 189 27 61 chr18 22575023 22575113 -63413821 + L1MB7 LINE L1 5199 5291 -855 3173 124 35 51 chr18 22575136 22575877 -63413057 + L1MB7 LINE L1 5358 6177 -7 2258 104 3 0 chr18 22575922 22576221 -63412713 + AluSq SINE Alu 1 300 -13 231 61 0 0 chr18 22576367 22576400 -63412534 + (CATA)n Simple_repeat Simple_repeat 2 34 0 677 93 0 56 chr18 22576422 22576529 -63412405 + AluSg/x SINE Alu 205 305 -5 297 109 0 0 chr18 22576924 22576970 -63411964 + (TG)n Simple_repeat Simple_repeat 1 46 0 2126 152 65 8 chr18 22577142 22577511 -63411423 + MLT1B LTR MaLR 1 390 0 3376 157 36 91 chr18 22578077 22578618 -63410316 + LTR8 LTR ERV1 4 496 -195 2173 111 0 3 chr18 22578618 22578915 -63410019 - AluSx SINE Alu -15 297 2 3376 157 36 91 chr18 22578915 22579101 -63409833 + LTR8 LTR ERV1 496 691 0 2400 90 3 0 chr18 22579348 22579660 -63409274 - AluSp SINE Alu 0 313 1 1318 174 83 34 chr18 22580188 22580548 -63408386 + MSTA LTR MaLR 2 375 0 227 181 96 75 chr18 22580548 22580563 -63408371 - HAL1b LINE L1 -464 884 871 2070 141 7 0 chr18 22580563 22580869 -63408065 + AluSx SINE Alu 1 308 -4 227 181 96 75 chr18 22580869 22580947 -63407987 - HAL1b LINE L1 -477 871 789 225 287 26 38 chr18 22580945 22581099 -63407835 - HAL1b LINE L1 -146 2361 819 * 1092 176 42 70 chr18 22581116 22581400 -63407534 + MLT2D LTR ERVL 1 276 -138 182 128 26 0 chr18 22581492 22581531 -63407403 + (TA)n Simple_repeat Simple_repeat 2 41 0 226 94 0 0 chr18 22581545 22581577 -63407357 + MLT2D LTR ERVL 383 414 0 801 190 0 29 chr18 22581663 22581800 -63407134 + FLAM_A SINE Alu 1 133 0 2238 99 0 3 chr18 22581869 22582176 -63406758 - AluSq SINE Alu 0 308 3 574 161 36 63 chr18 22582357 22582512 -63406422 + MLT1A2 LTR MaLR 4 174 -216 318 163 0 0 chr18 22582533 22582582 -63406352 + MLT1A2 LTR MaLR 85 133 -241 2247 115 3 6 chr18 22582606 22582919 -63406015 + AluSx SINE Alu 1 312 0 286 191 88 67 chr18 22582939 22583058 -63405876 + MSTB2 LTR MaLR 197 346 -111 300 246 18 0 chr18 22583421 22583478 -63405456 + MIR SINE MIR 12 69 -193 182 232 36 18 chr18 22583621 22583677 -63405257 - L2 LINE L2 -337 2977 2921 492 161 206 19 chr18 22584488 22584643 -63404291 + MIR SINE MIR 76 259 -3 1779 286 48 20 chr18 22585064 22585654 -63403280 + L1MB8 LINE L1 11 616 -6243 2625 244 35 49 chr18 22585665 22586063 -63402871 + L1MB8 LINE L1 1397 1799 -5160 2267 116 0 0 chr18 22586063 22586365 -63402569 + AluSq SINE Alu 1 302 -11 2625 244 35 49 chr18 22586365 22586937 -63401997 + L1MB8 LINE L1 1799 2353 -4606 4705 192 41 60 chr18 22587134 22588920 -63400014 + L1MB8 LINE L1 2473 6989 0 220 296 215 0 chr18 22589058 22589193 -63399741 - MIR3 SINE MIR -16 192 29 591 219 56 122 chr18 22589288 22589558 -63399376 - MER112 DNA MER1_type -4 252 1 2280 72 41 0 chr18 22589948 22590239 -63398695 - AluY SINE Alu -8 303 1 2050 143 0 13 chr18 22590513 22590820 -63398114 + AluSx SINE Alu 1 303 -9 1873 126 111 88 chr18 22591257 22591679 -63397255 - MSTB1 LTR MaLR 0 432 1 2535 151 97 19 chr18 22591960 22592478 -63396456 - MER74A LTR ERVL 0 558 1 3144 149 33 28 chr18 22592677 22593222 -63395712 - MER21A LTR ERV1 -6 925 378 1522 107 86 4 chr18 22593229 22593473 -63395461 - MER21A LTR ERV1 -667 264 1 21 36 0 0 chr18 22594210 22594238 -63394696 + AT_rich Low_complexity Low_complexity 1 28 0 1057 277 123 36 chr18 22594646 22594891 -63394043 - MLT1K LTR MaLR -4 584 362 1827 195 38 35 chr18 22594891 22595260 -63393674 + MLT1A2 LTR MaLR 4 373 -1 1057 277 123 36 chr18 22595260 22595516 -63393418 - MLT1K LTR MaLR -226 362 39 806 160 38 0 chr18 22595770 22595901 -63393033 - AluJo SINE Alu -176 136 1 2262 104 0 3 chr18 22596494 22596792 -63392142 + AluSx SINE Alu 1 297 -15 346 312 14 9 chr18 22597111 22597241 -63391693 + CT-rich Low_complexity Low_complexity 1 130 0 2760 140 0 53 chr18 22598742 22599178 -63389756 - MLT2D LTR ERVL 0 414 2 1396 171 114 0 chr18 22599187 22599451 -63389483 - ERVL-D LTR ERVL -15 5749 5456 3948 134 20 2 chr18 22599458 22600063 -63388871 - L1MA5 LINE L1 0 6300 5685 2306 132 15 46 chr18 22600065 22600460 -63388474 + L1PA16 LINE L1 5710 6092 -74 315 302 136 37 chr18 22600631 22600873 -63388061 + L2 LINE L2 2808 3073 -199 542 262 204 61 chr18 22602291 22602570 -63386364 + L2 LINE L2 2991 3309 -4 2889 226 50 31 chr18 22602613 22603388 -63385546 - MER21B LTR ERV1 -51 812 23 243 173 0 160 chr18 22603397 22603472 -63385462 - MER21B LTR ERV1 -766 97 35 26 0 0 0 chr18 22603542 22603568 -63385366 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr18 22603584 22603605 -63385329 + AT_rich Low_complexity Low_complexity 1 21 0 2240 121 13 0 chr18 22603611 22603918 -63385016 - AluJb SINE Alu -1 311 1 2223 110 7 3 chr18 22604053 22604352 -63384582 - AluSx SINE Alu -12 300 1 311 343 7 22 chr18 22604707 22604844 -63384090 - L2 LINE L2 0 3272 3138 183 234 182 13 chr18 22605859 22605936 -63382998 - L2 LINE L2 -491 2823 2734 2272 176 99 64 chr18 22606024 22606362 -63382572 - MLT1F1 LTR MaLR 0 567 242 330 26 0 0 chr18 22606362 22606401 -63382533 + (GA)n Simple_repeat Simple_repeat 1 39 0 2272 176 99 64 chr18 22606401 22606531 -63382403 - MLT1F1 LTR MaLR -325 242 75 2153 113 0 3 chr18 22606531 22606822 -63382112 + AluSx SINE Alu 11 300 -12 2272 176 99 64 chr18 22606822 22606896 -63382038 - MLT1F1 LTR MaLR -492 75 5 1820 159 3 34 chr18 22607567 22607887 -63381047 - AluJo SINE Alu -2 310 1 262 275 42 28 chr18 22607911 22608053 -63380881 - L1ME4a LINE L1 -3 6118 5975 1306 172 112 42 chr18 22608511 22608796 -63380138 - AluJo SINE Alu -7 305 1 1189 132 0 0 chr18 22609272 22609439 -63379495 - AluSx SINE Alu -95 217 51 1933 136 26 13 chr18 22610632 22610934 -63378000 + AluSx SINE Alu 2 307 -5 1375 154 30 17 chr18 22611509 22611742 -63377192 + MER46A DNA MER2_type 1 236 0 1191 167 21 0 chr18 22611881 22612093 -63376841 + AluJb SINE Alu 86 301 0 208 296 42 14 chr18 22612129 22612200 -63376734 + L2 LINE L2 3200 3272 0 329 157 9 19 chr18 22612418 22612525 -63376409 + L1ME2 LINE L1 5780 5928 -236 620 162 47 68 chr18 22612529 22612677 -63376257 + L1M4 LINE L1 1 145 -6397 454 196 9 36 chr18 22612676 22612788 -63376146 + L1M4 LINE L1 2289 2397 -4249 * 948 240 66 0 chr18 22612785 22613027 -63375907 + L1MB7 LINE L1 5918 6175 -9 24 0 0 0 chr18 22613027 22613051 -63375883 + AT_rich Low_complexity Low_complexity 1 24 0 220 298 24 81 chr18 22613078 22613202 -63375732 - MIR SINE MIR -27 235 119 1301 104 0 0 chr18 22613249 22613413 -63375521 + AluY SINE Alu 1 164 -147 454 105 0 0 chr18 22613413 22613470 -63375464 + AluSq/x SINE Alu 73 129 -184 2319 112 0 0 chr18 22613485 22613781 -63375153 + AluSg SINE Alu 1 296 -14 3850 152 39 13 chr18 22613786 22614458 -63374476 + L1MB1 LINE L1 5480 6168 0 1123 124 23 0 chr18 22615381 22615558 -63373376 + L1MA5A LINE L1 6107 6287 -10 2073 130 0 7 chr18 22618072 22618373 -63370561 - AluJb SINE Alu -13 299 1 983 188 18 12 chr18 22619238 22619408 -63369526 + FAM SINE Alu 1 171 -4 1207 109 0 0 chr18 22620081 22620246 -63368688 + AluSg/x SINE Alu 133 297 -15 346 312 14 9 chr18 22620561 22620691 -63368243 + CT-rich Low_complexity Low_complexity 1 130 0 2760 140 0 53 chr18 22622192 22622628 -63366306 - MLT2D LTR ERVL 0 414 2 1396 171 114 0 chr18 22622637 22622901 -63366033 - ERVL-D LTR ERVL -15 5749 5456 3948 134 20 2 chr18 22622908 22623513 -63365421 - L1MA5 LINE L1 0 6300 5685 3062 118 8 42 chr18 22623513 22623984 -63364950 + L1PA16 LINE L1 5703 6162 -4 2671 127 12 0 chr18 22624015 22624424 -63364510 - L1MA5 LINE L1 -606 5697 5284 7938 220 71 28 chr18 22624424 22624563 -63364371 - ERVL-D LTR ERVL -150 5335 5203 1269 179 49 0 chr18 22624563 22624787 -63364147 + MER46A DNA MER2_type 2 236 0 7938 220 71 28 chr18 22624787 22626899 -63362035 - ERVL-D LTR ERVL -282 5203 3063 * 8474 179 11 16 chr18 22626892 22627156 -63361778 - ERVL-D LTR ERVL -2840 2924 2660 2501 162 36 5 chr18 22627156 22627569 -63361365 + MSTB LTR MaLR 1 426 0 8474 179 11 16 chr18 22627569 22628781 -63360153 - ERVL-D LTR ERVL -3104 2660 1455 2914 269 69 13 chr18 22628775 22629717 -63359217 - ERVL-D LTR ERVL -4633 1021 27 * 663 198 17 0 chr18 22629717 22629833 -63359101 + FLAM_C SINE Alu 1 118 -15 327 70 105 18 chr18 22629879 22629936 -63358998 - Ricksha DNA DNA -2333 913 852 2249 149 29 2 chr18 22629958 22629971 -63358963 - MLT2D LTR ERVL -35 485 474 423 68 0 0 chr18 22629971 22630030 -63358904 + (TG)n Simple_repeat Simple_repeat 2 60 0 2249 149 29 2 chr18 22630030 22630387 -63358547 - MLT2D LTR ERVL -46 474 6 1232 215 113 3 chr18 22630675 22630977 -63357957 + MER2 DNA MER2_type 10 344 -1 205 281 56 34 chr18 22630980 22631069 -63357865 + L2 LINE L2 3180 3270 -2 632 301 51 5 chr18 22631641 22631857 -63357077 - MIR SINE MIR -10 252 27 623 324 22 5 chr18 22632572 22632815 -63356119 - MIR SINE MIR 0 262 18 1812 130 7 57 chr18 22634259 22634382 -63354552 + AluJo SINE Alu 5 133 -179 2309 113 0 0 chr18 22634382 22634692 -63354242 - AluSg SINE Alu 0 310 1 1812 130 7 57 chr18 22634692 22634867 -63354067 + AluJo SINE Alu 133 288 -24 22 35 0 0 chr18 22635985 22636014 -63352920 + AT_rich Low_complexity Low_complexity 1 29 0 2234 86 36 3 chr18 22636058 22636361 -63352573 - AluSq SINE Alu 0 313 1 24 77 0 0 chr18 22638354 22638406 -63350528 + AT_rich Low_complexity Low_complexity 1 52 0 279 71 0 0 chr18 22638660 22638702 -63350232 + (TTTTTG)n Simple_repeat Simple_repeat 6 47 0 1565 161 0 12 chr18 22640002 22640251 -63348683 + AluJo SINE Alu 54 299 -13 2297 84 0 3 chr18 22640403 22640689 -63348245 + AluSx SINE Alu 13 297 -15 378 221 81 20 chr18 22641122 22641271 -63347663 - L1ME4a LINE L1 -3 6118 5961 503 256 220 16 chr18 22641314 22641619 -63347315 - L1ME4a LINE L1 -242 5879 5513 242 263 100 12 chr18 22641921 22642001 -63346933 + L2 LINE L2 3186 3272 0 215 182 23 0 chr18 22642002 22642046 -63346888 + (TAAA)n Simple_repeat Simple_repeat 3 47 0 227 143 0 143 chr18 22643133 22643196 -63345738 - L1MB1 LINE L1 -103 6065 6012 195 100 0 0 chr18 22644634 22644664 -63344270 + (TG)n Simple_repeat Simple_repeat 2 31 0 271 314 9 19 chr18 22646113 22646218 -63342716 + L2 LINE L2 3209 3312 -1 1013 131 7 0 chr18 22646432 22646577 -63342357 + FAM SINE Alu 22 167 -18 256 200 0 82 chr18 22646609 22646694 -63342240 - MIR SINE MIR -2 260 183 275 211 0 13 chr18 22651011 22651087 -63337847 + (CATA)n Simple_repeat Simple_repeat 2 76 0 207 139 0 0 chr18 22651092 22651128 -63337806 + (TG)n Simple_repeat Simple_repeat 2 37 0 835 204 139 28 chr18 22651463 22651679 -63337255 - MER46C DNA MER2_type -16 322 83 1578 137 27 4 chr18 22652206 22652462 -63336472 - L1PB4 LINE L1 0 6156 5895 943 298 111 53 chr18 22652845 22653794 -63335140 + L2 LINE L2 1686 2689 -625 288 340 82 50 chr18 22654012 22654330 -63334604 + L2 LINE L2 2941 3268 -4 * 446 273 107 11 chr18 22654320 22654507 -63334427 - L3 LINE CR1 -808 769 565 486 286 118 5 chr18 22655161 22655381 -63333553 + L1MC4a LINE L1 5595 5839 -1969 790 252 137 0 chr18 22655474 22655700 -63333234 - MIR SINE MIR -1 261 5 483 145 0 0 chr18 22655701 22655777 -63333157 - MER58 DNA MER1_type 0 2420 2345 383 196 46 3 chr18 22656130 22656256 -63332678 + MER53 DNA DNA 1 185 -4 336 24 0 0 chr18 22658729 22658770 -63330164 + (CA)n Simple_repeat Simple_repeat 2 42 0 511 301 94 31 chr18 22659707 22660122 -63328812 - L1M4 LINE L1 -1471 4675 4235 216 0 0 0 chr18 22660193 22660217 -63328717 + (TA)n Simple_repeat Simple_repeat 2 25 0 29 0 0 0 chr18 22660538 22660567 -63328367 + AT_rich Low_complexity Low_complexity 1 29 0 318 237 21 11 chr18 22660613 22660706 -63328228 - MARNA DNA Mariner -201 385 292 228 233 0 0 chr18 22660706 22660749 -63328185 + L2 LINE L2 3191 3233 -80 408 208 40 10 chr18 22660820 22660921 -63328013 - MARNA DNA Mariner -310 276 173 189 304 51 0 chr18 22661803 22661882 -63327052 + MIR SINE MIR 104 186 -76 1164 146 16 0 chr18 22662573 22662758 -63326176 + MER5A DNA MER1_type 1 188 -1 1451 157 0 17 chr18 22663005 22663241 -63325693 - AluJo SINE Alu -4 308 77 1379 133 78 0 chr18 22663425 22663643 -63325291 - MER46A DNA MER2_type -1 235 1 234 367 28 9 chr18 22663783 22663892 -63325042 + MIR SINE MIR 36 146 -62 598 196 60 151 chr18 22663942 22664271 -63324663 - LTR52 LTR ERVL -101 320 23 1730 184 3 7 chr18 22664271 22664564 -63324370 + AluJo SINE Alu 1 292 -20 598 196 60 151 chr18 22664564 22664586 -63324348 - LTR52 LTR ERVL -398 23 1 573 257 101 0 chr18 22664587 22664766 -63324168 - L1ME LINE L1 -446 5724 5528 551 244 6 49 chr18 22664759 22664923 -63324011 - L1MC/D LINE L1 -2249 5793 5637 * 225 305 116 11 chr18 22666694 22666789 -63322145 + L2 LINE L2 3205 3309 -4 1562 112 0 56 chr18 22667321 22667571 -63321363 - MER46A DNA MER2_type 0 236 1 356 274 37 22 chr18 22668331 22668466 -63320468 + MIR SINE MIR 9 145 -117 245 167 0 0 chr18 22668613 22668661 -63320273 - L1MB7 LINE L1 -9 6175 6128 227 188 138 75 chr18 22669217 22669297 -63319637 - L1M3e LINE L1 -5566 1464 1380 338 214 0 0 chr18 22669297 22669367 -63319567 - MER5A DNA MER1_type -119 70 1 1906 187 27 80 chr18 22671326 22671813 -63317121 - MLT1C LTR MaLR 0 467 7 355 338 50 0 chr18 22673026 22673186 -63315748 + MIR3 SINE MIR 36 203 -5 391 307 120 10 chr18 22674031 22674223 -63314711 + MIR SINE MIR 49 261 -1 269 325 12 0 chr18 22674425 22674508 -63314426 + MIR3 SINE MIR 86 169 -39 21 0 0 0 chr18 22675816 22675837 -63313097 + AT_rich Low_complexity Low_complexity 1 21 0 2304 74 7 0 chr18 22675920 22676204 -63312730 - AluSp SINE Alu -27 286 1 2543 67 0 6 chr18 22676992 22677305 -63311629 + AluY SINE Alu 1 311 0 2369 78 7 7 chr18 22677336 22677645 -63311289 + AluY SINE Alu 1 309 -2 784 239 101 10 chr18 22678627 22678836 -63310098 - MIR SINE MIR -21 241 14 193 352 60 16 chr18 22679367 22679549 -63309385 + L2 LINE L2 2424 2613 -701 2145 80 25 7 chr18 22680531 22680842 -63308092 + AluY SINE Alu 1 316 0 418 284 60 9 chr18 22681057 22681173 -63307761 - L2 LINE L2 -5 3267 3146 234 62 0 0 chr18 22681189 22681221 -63307713 + (CA)n Simple_repeat Simple_repeat 2 33 0 257 333 6 42 chr18 22681636 22681804 -63307130 + CT-rich Low_complexity Low_complexity 5 166 0 325 298 213 28 chr18 22681958 22682311 -63306623 + L2 LINE L2 2854 3271 -1 2166 134 0 0 chr18 22683298 22683604 -63305330 + AluSg SINE Alu 1 306 -4 1135 190 8 45 chr18 22684767 22685014 -63303920 + L1MB7 LINE L1 5946 6183 -1 2129 91 70 0 chr18 22685049 22685336 -63303598 + AluSx SINE Alu 1 307 -5 215 271 16 90 chr18 22685398 22685520 -63303414 - L2 LINE L2 -1 3312 3200 408 298 122 41 chr18 22685590 22685960 -63302974 - L2 LINE L2 -209 3104 2714 468 0 0 0 chr18 22686749 22686801 -63302133 + (TG)n Simple_repeat Simple_repeat 2 53 0 285 86 0 0 chr18 22686830 22686865 -63302069 + U2 snRNA snRNA 1 35 -153 22 88 0 0 chr18 22687678 22687735 -63301199 + AT_rich Low_complexity Low_complexity 1 57 0 416 247 89 38 chr18 22688109 22688267 -63300667 - L1ME LINE L1 -436 5685 5520 1444 169 37 55 chr18 22688328 22688600 -63300334 + AluJo SINE Alu 1 267 -45 372 298 67 58 chr18 22689053 22689278 -63299656 - L2 LINE L2 -2 3270 3044 400 223 170 18 chr18 22690400 22690512 -63298422 - L2 LINE L2 0 3313 3185 316 205 63 15 chr18 22690523 22690620 -63298314 - MIR SINE MIR -71 137 37 879 157 8 0 chr18 22691119 22691253 -63297681 + AluJo SINE Alu 1 135 -177 1695 206 13 0 chr18 22691253 22691559 -63297375 + AluJo SINE Alu 1 310 -2 615 178 14 14 chr18 22691568 22691714 -63297220 + GA-rich Low_complexity Low_complexity 3 148 0 959 288 112 29 chr18 22692543 22692928 -63296006 + L3 LINE CR1 307 723 -854 1778 244 58 19 chr18 22692931 22693508 -63295426 - LTR48B LTR ERV1 -3 641 1 830 325 152 20 chr18 22693524 22694167 -63294767 + L3 LINE CR1 736 1463 -114 2528 79 0 0 chr18 22694586 22694889 -63294045 + AluSq SINE Alu 1 303 -10 34 24 0 0 chr18 22694922 22694963 -63293971 + AT_rich Low_complexity Low_complexity 1 41 0 231 257 114 29 chr18 22694970 22695075 -63293859 + L1ME4a LINE L1 6007 6120 -1 1443 118 0 48 chr18 22695350 22695579 -63293355 + AluSg/x SINE Alu 85 302 -10 291 236 76 83 chr18 22695649 22695806 -63293128 + L2 LINE L2 3103 3258 -14 600 100 0 0 chr18 22696084 22696164 -63292770 + MADE1 DNA Mariner 1 80 0 490 279 127 5 chr18 22696436 22696633 -63292301 + MIR SINE MIR 42 262 0 2771 235 39 48 chr18 22697304 22698019 -63290915 - L1M4 LINE L1 -2554 3592 2885 2229 125 0 0 chr18 22698019 22698331 -63290603 + AluSx SINE Alu 1 312 0 2771 235 39 48 chr18 22698331 22698534 -63290400 - L1M4 LINE L1 -3261 2885 2682 240 287 0 17 chr18 22699068 22699183 -63289751 + L1MEc LINE L1 987 1099 -5297 318 284 256 0 chr18 22699452 22699628 -63289306 - MIR SINE MIR -29 233 13 272 295 238 10 chr18 22699768 22699961 -63288973 - MIR SINE MIR -6 256 20 440 353 0 0 chr18 22700138 22700274 -63288660 + MIR3 SINE MIR 41 176 -32 2303 124 5 43 chr18 22701803 22702023 -63286911 - MER46B DNA MER2_type -2495 236 9 264 59 0 0 chr18 22702023 22702057 -63286877 + (TG)n Simple_repeat Simple_repeat 1 34 0 1841 151 11 11 chr18 22702057 22702336 -63286598 - AluSx SINE Alu -33 279 1 2303 124 5 43 chr18 22702336 22702485 -63286449 - MER46B DNA MER2_type -2720 11 5 389 320 121 34 chr18 22702738 22702944 -63285990 + MIR SINE MIR 2 225 -37 1347 52 0 0 chr18 22703806 22703959 -63284975 - AluSx SINE Alu -159 153 1 1805 147 9 50 chr18 22704006 22704325 -63284609 + AluJo SINE Alu 1 306 -6 252 307 88 15 chr18 22705205 22705342 -63283592 + L1ME4a LINE L1 5975 6121 0 822 90 49 0 chr18 22705471 22705593 -63283341 - L1PA6 LINE L1 -1 6153 6026 230 208 0 0 chr18 22706324 22706372 -63282562 + Alu SINE Alu 233 280 -22 207 139 0 0 chr18 22706407 22706443 -63282491 + (A)n Simple_repeat Simple_repeat 1 36 0 32 26 0 0 chr18 22707713 22707752 -63281182 + AT_rich Low_complexity Low_complexity 1 39 0 1794 166 14 0 chr18 22707752 22708030 -63280904 - AluJo SINE Alu -30 282 1 21 0 0 0 chr18 22708403 22708424 -63280510 + AT_rich Low_complexity Low_complexity 1 21 0 240 214 0 0 chr18 22708572 22708628 -63280306 + CT-rich Low_complexity Low_complexity 1 56 0 355 237 21 62 chr18 22709106 22709203 -63279731 - L2 LINE L2 0 3272 3180 2505 76 0 0 chr18 22710220 22710523 -63278411 + AluY SINE Alu 7 309 -2 691 141 0 0 chr18 22710628 22710727 -63278207 - Tigger7 DNA MER2_type 0 2587 2489 * 1408 171 51 16 chr18 22710725 22710982 -63277952 - Tigger7 DNA MER2_type -284 266 1 764 216 122 14 chr18 22712151 22712364 -63276570 + MIR SINE MIR 5 240 -22 226 234 0 0 chr18 22712612 22712659 -63276275 + L1ME LINE L1 5674 5720 -450 22 0 0 0 chr18 22712807 22712829 -63276105 + AT_rich Low_complexity Low_complexity 1 22 0 182 271 17 0 chr18 22713071 22713130 -63275804 - L2 LINE L2 -262 3010 2951 580 245 166 11 chr18 22713339 22713604 -63275330 + MER5C DNA MER1_type 18 323 -1 27 29 0 0 chr18 22713712 22713746 -63275188 + AT_rich Low_complexity Low_complexity 1 34 0 395 211 46 23 chr18 22713746 22713921 -63275013 + (TA)n Simple_repeat Simple_repeat 1 179 0 382 183 30 0 chr18 22713935 22714104 -63274830 + (TA)n Simple_repeat Simple_repeat 1 174 0 979 209 0 0 chr18 22714105 22714263 -63274671 - FRAM SINE Alu -8 158 1 201 329 68 14 chr18 22714292 22714365 -63274569 - MIR SINE MIR -25 237 161 189 107 0 0 chr18 22714374 22714402 -63274532 + (TTA)n Simple_repeat Simple_repeat 2 29 0 346 56 111 0 chr18 22715826 22715880 -63273054 + L1MB4 LINE L1 6094 6153 -27 191 329 14 41 chr18 22715909 22715982 -63272952 - L2 LINE L2 -93 3179 3109 24 0 0 0 chr18 22716850 22716874 -63272060 + AT_rich Low_complexity Low_complexity 1 24 0 786 194 222 19 chr18 22716957 22717173 -63271761 - MIR SINE MIR -1 261 2 2249 123 0 0 chr18 22717700 22718039 -63270895 + AluSx SINE Alu 12 350 0 5853 123 32 30 chr18 22718833 22720219 -63268715 - L1PA15 LINE L1 0 6165 4795 228 342 13 38 chr18 22722657 22722815 -63266119 - MIR SINE MIR -1 261 108 266 311 0 0 chr18 22724549 22724623 -63264311 - MIR3 SINE MIR -27 181 108 21 0 0 0 chr18 22724623 22724644 -63264290 + AT_rich Low_complexity Low_complexity 1 21 0 273 321 12 0 chr18 22724787 22724868 -63264066 - L2 LINE L2 0 3313 3232 656 337 100 6 chr18 22725176 22725645 -63263289 - L2 LINE L2 -557 2757 2245 821 128 60 0 chr18 22725996 22726113 -63262821 - FLAM_C SINE Alu -17 126 3 2065 130 3 7 chr18 22726120 22726419 -63262515 - AluSx SINE Alu -14 298 1 2351 104 7 0 chr18 22726501 22726810 -63262124 - AluSq SINE Alu -2 311 1 696 225 78 0 chr18 22727904 22728095 -63260839 + MIR SINE MIR 52 257 -5 192 40 0 0 chr18 22728132 22728157 -63260777 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 510 247 153 21 chr18 22728851 22729041 -63259893 - MIR SINE MIR -17 245 31 186 228 0 167 chr18 22729063 22729130 -63259804 - MIR SINE MIR -10 252 210 2092 128 10 0 chr18 22729130 22729436 -63259498 - AluSq SINE Alu -4 309 1 186 228 0 167 chr18 22729436 22729482 -63259452 - MIR SINE MIR -52 210 158 180 0 0 0 chr18 22731143 22731163 -63257771 + (CAG)n Simple_repeat Simple_repeat 3 22 0 205 203 0 17 chr18 22732406 22732433 -63256501 + A-rich Low_complexity Low_complexity 4 30 -31 1460 165 96 4 chr18 22732433 22732694 -63256240 + AluJo SINE Alu 1 285 -27 205 203 0 17 chr18 22732694 22732725 -63256209 + A-rich Low_complexity Low_complexity 30 61 0 631 252 0 0 chr18 22733343 22733482 -63255452 + FLAM_C SINE Alu 2 140 -3 27 0 0 0 chr18 22733484 22733511 -63255423 + AT_rich Low_complexity Low_complexity 1 27 0 1370 232 50 11 chr18 22733515 22733877 -63255057 + L1ME3A LINE L1 5764 6139 -31 1733 134 0 21 chr18 22735363 22735653 -63253281 - L1MA4 LINE L1 -9 6291 6008 546 223 65 7 chr18 22736303 22736442 -63252492 + MER5B DNA MER1_type 14 160 -18 209 257 41 43 chr18 22736619 22736790 -63252144 - MIR SINE MIR -31 231 20 199 369 76 31 chr18 22737050 22737405 -63251529 - L2 LINE L2 -726 2588 2218 1168 205 19 4 chr18 22737487 22737745 -63251189 + MIR SINE MIR 1 262 0 315 294 37 29 chr18 22738016 22738152 -63250782 - MIR SINE MIR -79 183 47 33 43 0 0 chr18 22738166 22738213 -63250721 + AT_rich Low_complexity Low_complexity 1 47 0 1737 25 5 0 chr18 22738213 22738415 -63250519 - L1PA5 LINE L1 -7 6147 5945 379 234 103 51 chr18 22738507 22738682 -63250252 + MLT1L LTR MaLR 172 355 -260 2425 86 0 6 chr18 22739051 22739365 -63249569 + AluSx SINE Alu 1 312 0 245 254 70 44 chr18 22739888 22740002 -63248932 - MLT1L LTR MaLR -8 607 491 323 245 10 31 chr18 22740142 22740240 -63248694 - MLT1L LTR MaLR -348 267 172 514 325 16 41 chr18 22742030 22742350 -63246584 - LTR16B LTR ERVL 0 464 153 2363 85 3 7 chr18 22742899 22743204 -63245730 - AluSg SINE Alu -6 304 1 21 0 0 0 chr18 22743291 22743312 -63245622 + GC_rich Low_complexity Low_complexity 1 21 0 232 211 0 19 chr18 22744134 22744186 -63244748 - L2 LINE L2 -1 3312 3262 2181 79 9 63 chr18 22744549 22744864 -63244070 - AluSx SINE Alu -13 299 2 1621 148 10 30 chr18 22745135 22745438 -63243496 + L1MB2 LINE L1 5872 6168 -3 650 260 150 56 chr18 22746459 22746821 -63242113 - L2 LINE L2 -137 3176 2849 2443 85 7 0 chr18 22746821 22747126 -63241808 + AluSg SINE Alu 1 307 -3 650 260 150 56 chr18 22747126 22747535 -63241399 - L2 LINE L2 -464 2849 2290 873 262 124 15 chr18 22748588 22748992 -63239942 + MER113 DNA MER1_type? 3 450 -71 2578 56 0 3 chr18 22749776 22750080 -63238854 - AluY SINE Alu -8 303 1 2374 110 0 0 chr18 22750528 22750838 -63238096 - AluSx SINE Alu -2 310 1 223 306 132 0 chr18 22752342 22752463 -63236471 + MIR SINE MIR 50 186 -76 693 315 36 4 chr18 22754025 22754276 -63234658 + MIR SINE MIR 1 259 -3 262 351 92 6 chr18 22754618 22754792 -63234142 + MIR SINE MIR 23 211 -51 2323 125 0 0 chr18 22755298 22755610 -63233324 - AluSx SINE Alu 0 312 1 1868 162 3 7 chr18 22756089 22756392 -63232542 + AluJo SINE Alu 2 303 -9 25 0 0 0 chr18 22756930 22756955 -63231979 + AT_rich Low_complexity Low_complexity 1 25 0 220 286 48 0 chr18 22757194 22757257 -63231677 - L2 LINE L2 -68 3204 3139 376 248 154 0 chr18 22757765 22757914 -63231020 + L3 LINE CR1 1372 1543 -34 1826 126 0 11 chr18 22758148 22758409 -63230525 + AluJo SINE Alu 1 258 -54 471 292 55 62 chr18 22759594 22759851 -63229083 - L1ME LINE L1 -314 5807 5553 1741 180 3 0 chr18 22761718 22762002 -63226932 + AluJo SINE Alu 1 285 -27 1837 171 4 0 chr18 22762460 22762741 -63226193 + AluJo SINE Alu 1 282 -30 506 243 97 49 chr18 22762962 22763209 -63225725 + LTR16C LTR ERVL 233 491 0 312 299 62 13 chr18 22763901 22764137 -63224797 + L1P LINE L1 4924 5167 -979 312 292 99 31 chr18 22764219 22764411 -63224523 + L1ME LINE L1 5270 5474 -647 270 170 0 0 chr18 22764514 22764561 -63224373 + L1PA11 LINE L1 6125 6171 -3 2141 124 0 3 chr18 22764628 22764919 -63224015 + AluSx SINE Alu 1 290 -22 910 185 0 19 chr18 22765048 22765205 -63223729 + FRAM SINE Alu 2 155 -21 357 137 0 41 chr18 22766089 22766162 -63222772 - Alu SINE Alu 0 300 231 183 229 91 57 chr18 22766532 22766707 -63222227 - L2 LINE L2 -254 3018 2838 187 285 160 60 chr18 22766782 22766844 -63222090 - L2 LINE L2 -1391 1923 1869 3942 55 25 0 chr18 22766844 22767318 -63221616 + LTR2B LTR ERV1 1 486 -4 187 285 160 60 chr18 22767318 22767806 -63221128 - L2 LINE L2 -1445 1869 1318 337 274 115 19 chr18 22768060 22768217 -63220717 - MER5B DNA MER1_type 0 178 7 498 88 0 0 chr18 22768300 22768368 -63220566 + AluJ/FLAM SINE Alu 2 69 -243 2305 101 0 3 chr18 22768393 22768689 -63220245 + AluSx SINE Alu 1 295 -17 234 0 0 0 chr18 22769044 22769070 -63219864 + (CA)n Simple_repeat Simple_repeat 2 27 0 212 0 0 35 chr18 22770206 22770235 -63218699 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 289 267 75 17 chr18 22771858 22771978 -63216956 - MIR SINE MIR -12 250 124 2712 199 15 9 chr18 22772039 22772568 -63216366 + MER74A LTR ERVL 26 557 -1 1710 189 7 0 chr18 22772783 22773079 -63215855 - AluJo SINE Alu -14 298 1 2409 105 0 0 chr18 22773275 22773581 -63215353 - AluSx SINE Alu -6 306 1 784 325 94 9 chr18 22774349 22774774 -63214160 + L2 LINE L2 2267 2727 -587 15982 123 7 2 chr18 22775341 22779551 -63209383 - L1PA10 LINE L1 -5 6163 1931 812 182 0 0 chr18 22779692 22779824 -63209110 + AluJb SINE Alu 135 266 -46 188 317 118 19 chr18 22779880 22780041 -63208893 + L2 LINE L2 2852 3028 -285 265 290 63 54 chr18 22780058 22780279 -63208655 - MLT1J LTR MaLR -2 509 287 309 312 96 35 chr18 22780380 22780579 -63208355 - MLT1L LTR MaLR -359 256 46 822 215 12 72 chr18 22780582 22780833 -63208101 + AluSx SINE Alu 1 236 -76 1200 148 11 0 chr18 22780950 22781132 -63207802 + AluSg/x SINE Alu 119 302 -8 338 243 0 63 chr18 22781259 22781370 -63207564 + L2 LINE L2 3158 3261 -52 248 333 63 17 chr18 22781439 22781613 -63207321 - MIR SINE MIR -47 215 34 332 296 87 85 chr18 22781731 22781952 -63206982 + LTR16C LTR ERVL 111 335 -156 2141 177 60 27 chr18 22781952 22782437 -63206497 + MLT1D LTR MaLR 5 505 0 332 296 87 85 chr18 22782437 22782593 -63206341 + LTR16C LTR ERVL 335 489 -2 2170 104 7 3 chr18 22783020 22783307 -63205627 + AluSx SINE Alu 1 288 -24 341 284 11 11 chr18 22784300 22784395 -63204539 + GA-rich Low_complexity Low_complexity 4 98 0 258 297 62 16 chr18 22784817 22785009 -63203925 + L2 LINE L2 2954 3154 -159 2225 131 0 0 chr18 22785809 22786115 -63202819 + AluSx SINE Alu 1 306 -6 698 198 180 5 chr18 22786441 22786663 -63202271 + MIR SINE MIR 2 262 0 1836 171 77 3 chr18 22787068 22787408 -63201526 - MLT1A1 LTR MaLR 0 365 1 1782 138 34 13 chr18 22787931 22788229 -63200705 + THE1C LTR MaLR 72 375 0 2059 241 19 29 chr18 22788248 22788634 -63200300 + L1ME1 LINE L1 418 840 -5556 1456 220 57 14 chr18 22788634 22788984 -63199950 + MLT1A1 LTR MaLR 1 365 0 2059 241 19 29 chr18 22788984 22789316 -63199618 + L1ME1 LINE L1 840 1174 -5222 2211 190 51 43 chr18 22789322 22789790 -63199144 - MLT2B3 LTR ERVL -4 550 79 437 155 0 0 chr18 22789891 22789962 -63198972 - MLT2B3 LTR ERVL -483 71 1 226 238 89 30 chr18 22789986 22790087 -63198847 + L1ME1 LINE L1 1193 1299 -5097 951 104 0 0 chr18 22790088 22790213 -63198721 + AluSg/x SINE Alu 176 300 -12 446 282 44 51 chr18 22790232 22790526 -63198408 + L1ME1 LINE L1 1289 1580 -4816 363 202 60 0 chr18 22790526 22790610 -63198324 + L1 LINE L1 3631 3719 -2427 * 1691 218 56 24 chr18 22790608 22791109 -63197825 + L1ME1 LINE L1 4259 4775 -1440 1391 167 4 0 chr18 22791110 22791337 -63197597 + AluJo SINE Alu 83 310 -2 3326 215 53 15 chr18 22791337 22792738 -63196196 + L1ME1 LINE L1 4773 6227 -8 4086 97 24 2 chr18 22793702 22794292 -63194642 + L1MA2 LINE L1 5702 6304 0 24 0 0 0 chr18 22794292 22794316 -63194618 + AT_rich Low_complexity Low_complexity 1 24 0 282 248 239 18 chr18 22794466 22794575 -63194359 - L2 LINE L2 -2 3270 3138 370 62 250 0 chr18 22796054 22796118 -63192816 + MADE1 DNA Mariner 1 80 0 411 226 85 0 chr18 22796989 22797095 -63191839 - MER5B DNA MER1_type -14 164 50 33 0 0 0 chr18 22797098 22797131 -63191803 + AT_rich Low_complexity Low_complexity 1 33 0 1305 169 159 60 chr18 22797186 22797387 -63191547 - L1MD2 LINE L1 -216 6143 5963 1987 146 0 7 chr18 22797387 22797675 -63191259 + AluSx SINE Alu 1 286 -26 1305 169 159 60 chr18 22797675 22797868 -63191066 - L1MD2 LINE L1 -396 5963 5675 1310 139 5 19 chr18 22797868 22798076 -63190858 + AluJo SINE Alu 83 287 -25 2312 118 27 13 chr18 22798084 22798458 -63190476 - L1MD2 LINE L1 -673 5686 5308 225 224 0 0 chr18 22798498 22798547 -63190387 - MER5B DNA MER1_type -129 49 1 366 250 50 36 chr18 22798813 22798953 -63189981 + MER5A DNA MER1_type 45 186 -3 2245 114 0 7 chr18 22799029 22799328 -63189606 + AluSc SINE Alu 1 297 -12 813 188 0 0 chr18 22799336 22799469 -63189465 + AluJo SINE Alu 1 133 -169 2287 118 0 3 chr18 22799470 22799927 -63189007 + AluSx SINE Alu 1 456 0 1076 169 12 0 chr18 22799933 22800105 -63188829 + AluJo SINE Alu 139 312 0 394 294 129 0 chr18 22800258 22800428 -63188506 - MIR SINE MIR -4 258 67 22 0 0 0 chr18 22800485 22800507 -63188427 + AT_rich Low_complexity Low_complexity 1 22 0 1844 136 55 4 chr18 22800543 22800816 -63188118 + AluSx SINE Alu 1 287 -25 31 44 0 0 chr18 22800816 22800861 -63188073 + AT_rich Low_complexity Low_complexity 1 45 0 428 245 0 10 chr18 22802073 22802175 -63186759 - LTR67 LTR ERVL -1 556 456 1797 166 8 75 chr18 22802371 22802757 -63186177 + MLT1B LTR MaLR 23 382 -8 266 341 40 29 chr18 22802800 22802859 -63186075 - MIR SINE MIR -7 255 198 867 174 16 49 chr18 22802859 22803043 -63185891 + MER45A DNA AcHobo 1 178 0 266 341 40 29 chr18 22803043 22803156 -63185778 - MIR SINE MIR -64 198 81 1771 15 0 10 chr18 22804025 22804223 -63184711 - AluY SINE Alu -10 301 106 322 272 110 0 chr18 22804318 22804454 -63184480 + MLT1K LTR MaLR 106 256 -332 434 188 116 9 chr18 22804775 22804887 -63184047 + MER20B DNA MER1_type 49 172 -611 261 305 162 36 chr18 22804900 22805067 -63183867 + MLT1K LTR MaLR 394 581 -7 487 276 130 67 chr18 22805297 22805713 -63183221 + L2 LINE L2 2826 3267 -5 1615 191 0 17 chr18 22805953 22806247 -63182687 - AluJo SINE Alu -18 294 6 202 301 27 0 chr18 22807079 22807152 -63181782 - MER5A DNA MER1_type -1 188 114 * 235 286 14 14 chr18 22807100 22807170 -63181764 + MER5A DNA MER1_type 36 105 -84 404 286 97 17 chr18 22807355 22807530 -63181404 + MIR SINE MIR 48 236 -26 22 35 0 0 chr18 22807578 22807607 -63181327 + AT_rich Low_complexity Low_complexity 1 29 0 299 136 30 0 chr18 22807695 22807761 -63181173 - L1MB7 LINE L1 0 6184 6117 477 184 11 0 chr18 22807765 22807852 -63181082 + AluJ/FLAM SINE Alu 2 89 -223 859 145 6 6 chr18 22807953 22808112 -63180822 + GA-rich Low_complexity Low_complexity 2 160 0 1059 174 12 0 chr18 22808118 22808290 -63180644 + FRAM SINE Alu 3 176 0 380 300 129 0 chr18 22808443 22808613 -63180321 - MIR SINE MIR -4 258 67 22 0 0 0 chr18 22808670 22808692 -63180242 + AT_rich Low_complexity Low_complexity 1 22 0 1844 136 55 4 chr18 22808728 22809001 -63179933 + AluSx SINE Alu 1 287 -25 31 44 0 0 chr18 22809001 22809046 -63179888 + AT_rich Low_complexity Low_complexity 1 45 0 428 245 0 10 chr18 22810258 22810360 -63178574 - LTR67 LTR ERVL -1 556 456 1797 166 8 75 chr18 22810556 22810942 -63177992 + MLT1B LTR MaLR 23 382 -8 266 341 40 29 chr18 22810985 22811044 -63177890 - MIR SINE MIR -7 255 198 867 174 16 49 chr18 22811044 22811228 -63177706 + MER45A DNA AcHobo 1 178 0 266 341 40 29 chr18 22811228 22811341 -63177593 - MIR SINE MIR -64 198 81 2412 94 0 3 chr18 22812205 22812513 -63176421 - AluSx SINE Alu -5 307 1 223 306 132 0 chr18 22814016 22814137 -63174797 + MIR SINE MIR 50 186 -76 408 82 0 0 chr18 22816062 22816123 -63172811 + (CA)n Simple_repeat Simple_repeat 1 61 0 679 294 130 47 chr18 22816131 22816575 -63172359 - L2 LINE L2 -35 3278 2767 2057 148 0 0 chr18 22816575 22816873 -63172061 + AluSx SINE Alu 1 298 -14 679 294 130 47 chr18 22816873 22817108 -63171826 - L2 LINE L2 -546 2767 2553 2287 105 0 40 chr18 22817271 22817594 -63171340 - AluSg SINE Alu 0 310 1 311 161 32 0 chr18 22817595 22817657 -63171277 + Charlie1 DNA MER1_type 2697 2760 -1 2542 235 86 31 chr18 22817711 22818740 -63170194 - L1ME2 LINE L1 -10 6154 5072 1728 161 4 0 chr18 22819694 22819961 -63168973 + AluSx SINE Alu 1 268 -44 1945 139 0 13 chr18 22820355 22820664 -63168270 + AluSq SINE Alu 1 305 -8 31 0 0 0 chr18 22821293 22821324 -63167610 + AT_rich Low_complexity Low_complexity 1 31 0 1568 137 78 7 chr18 22821499 22821770 -63167164 - Tigger3(Golem) DNA MER2_type -1 3028 2739 740 132 0 0 chr18 22821770 22821876 -63167058 + AluJb SINE Alu 2 107 -205 2217 117 0 0 chr18 22823013 22823311 -63165623 - AluSx SINE Alu -12 300 3 363 293 18 10 chr18 22823626 22823755 -63165179 - MIR SINE MIR -62 146 31 3918 141 0 28 chr18 22824201 22824846 -63164088 + L1PA13 LINE L1 5533 6159 -4 2141 156 49 3 chr18 22825685 22826070 -63162864 - MER57A LTR ERV1 0 403 1 1978 151 3 3 chr18 22826394 22826686 -63162248 + AluJb SINE Alu 1 292 -20 658 299 84 60 chr18 22826802 22827267 -63161667 + MLT1K LTR MaLR 96 571 -17 228 250 0 0 chr18 22827412 22827460 -63161474 + CT-rich Low_complexity Low_complexity 1 48 0 1777 258 122 9 chr18 22828444 22828480 -63160454 + Zaphod DNA AcHobo 38 69 -3962 330 26 0 0 chr18 22828480 22828519 -63160415 + (CA)n Simple_repeat Simple_repeat 2 40 0 1777 258 122 9 chr18 22828519 22829006 -63159928 + Zaphod DNA AcHobo 69 620 -3411 2201 226 147 1 chr18 22829009 22829664 -63159270 + Zaphod DNA AcHobo 3279 4028 -3 22 88 0 0 chr18 22830273 22830330 -63158604 + GC_rich Low_complexity Low_complexity 1 57 0 321 118 0 0 chr18 22830345 22830396 -63158538 + (TCCCC)n Simple_repeat Simple_repeat 2 52 0 21 36 0 0 chr18 22830423 22830451 -63158483 + GC_rich Low_complexity Low_complexity 1 28 0 270 180 33 0 chr18 22830515 22830576 -63158358 + (CGG)n Simple_repeat Simple_repeat 3 65 0 29 0 0 0 chr18 22830890 22830919 -63158015 + GC_rich Low_complexity Low_complexity 1 29 0 370 290 195 15 chr18 22832912 22833112 -63155822 + MIR SINE MIR 22 257 -5 1275 197 28 0 chr18 22835291 22835509 -63153425 + MER58A DNA MER1_type 1 224 0 2027 150 72 0 chr18 22836116 22836436 -63152498 + MER2 DNA MER2_type 2 344 0 907 113 0 0 chr18 22837166 22837290 -63151644 - AluSg/x SINE Alu -3 309 186 1006 128 0 0 chr18 22837730 22837871 -63151063 - MER2 DNA MER2_type -203 142 2 317 283 67 28 chr18 22837975 22838155 -63150779 - MIR SINE MIR -70 192 6 691 176 176 55 chr18 22839400 22839560 -63149374 - MER20B DNA MER1_type 0 783 644 678 58 0 0 chr18 22839560 22839647 -63149287 + (TA)n Simple_repeat Simple_repeat 1 87 0 2211 109 3 0 chr18 22839647 22839940 -63148994 - AluSg SINE Alu -16 294 1 691 176 176 55 chr18 22839940 22840016 -63148918 - MER20B DNA MER1_type -138 645 517 1918 154 13 0 chr18 22840492 22840798 -63148136 - AluSx SINE Alu -2 310 1 652 274 110 2 chr18 22840995 22841350 -63147584 - MER20B DNA MER1_type -289 494 35 2080 90 72 0 chr18 22842639 22842917 -63146017 + AluSx SINE Alu 1 298 -14 1856 130 33 30 chr18 22843189 22843488 -63145446 - AluJo SINE Alu -12 300 1 2379 104 0 0 chr18 22844340 22844648 -63144286 - AluSx SINE Alu 0 312 5 2072 110 4 0 chr18 22844721 22845021 -63143913 - AluSx SINE Alu 0 311 11 4043 113 16 5 chr18 22845147 22845722 -63143212 - L1PB1 LINE L1 -7 6144 5564 2051 104 34 14 chr18 22846278 22846575 -63142359 - AluSx SINE Alu -9 303 1 1777 150 0 45 chr18 22846575 22846887 -63142047 - AluSx SINE Alu -13 299 1 356 299 79 64 chr18 22847177 22847401 -63141533 + L2 LINE L2 2513 2745 -569 2014 215 23 46 chr18 22847401 22847918 -63141016 + MLT1D LTR MaLR 1 505 0 356 299 79 64 chr18 22847918 22848021 -63140913 + L2 LINE L2 2745 2845 -469 2588 117 6 0 chr18 22848036 22848394 -63140540 - MER46B DNA MER2_type -1 235 1 1840 167 0 0 chr18 22848600 22848908 -63140026 + AluSx SINE Alu 1 308 0 187 321 15 58 chr18 22849058 22849195 -63139739 + L2 LINE L2 2974 3104 -168 3905 196 93 9 chr18 22849211 22850102 -63138832 + Tigger6a DNA MER2_type 1 966 -117 5801 172 51 14 chr18 22850102 22850660 -63138274 - L1MB3 LINE L1 -5 6178 5642 1523 208 13 10 chr18 22850660 22850968 -63137966 - AluJo SINE Alu -3 309 1 5801 172 51 14 chr18 22850968 22852254 -63136680 - L1MB3 LINE L1 -541 5642 4240 1937 162 0 7 chr18 22852254 22852563 -63136371 - AluJo SINE Alu -5 307 1 5801 172 51 14 chr18 22852563 22852795 -63136139 - L1MB3 LINE L1 -1943 4240 4018 643 211 7 14 chr18 22852795 22852937 -63135997 + Tigger6a DNA MER2_type 943 1083 0 428 246 144 0 chr18 22852949 22853067 -63135867 + L2 LINE L2 3177 3311 -2 238 367 37 18 chr18 22853778 22853887 -63135047 - L2 LINE L2 -17 3255 3145 2171 134 0 0 chr18 22853907 22854213 -63134721 - AluJb SINE Alu -6 306 1 1571 214 30 63 chr18 22854270 22854668 -63134266 - MLT1B LTR MaLR -2 388 4 405 239 104 15 chr18 22854729 22854863 -63134071 - MIR SINE MIR -70 192 47 843 145 0 0 chr18 22855120 22855261 -63133673 - FLAM_C SINE Alu 0 142 2 245 275 214 52 chr18 22855262 22855589 -63133345 - L2 LINE L2 -564 2750 2371 26 30 0 0 chr18 22856205 22856238 -63132696 + AT_rich Low_complexity Low_complexity 1 33 0 376 295 126 73 chr18 22857623 22857874 -63131060 - L1ME3A LINE L1 -197 5973 5698 2281 126 27 21 chr18 22857874 22858208 -63130726 - MER1B DNA MER1_type -1 336 1 376 295 126 73 chr18 22858208 22858298 -63130636 - L1ME3A LINE L1 -472 5698 5614 1044 181 0 6 chr18 22858845 22859005 -63129929 + FRAM SINE Alu 1 159 -7 387 41 0 0 chr18 22859673 22859722 -63129212 + (TG)n Simple_repeat Simple_repeat 2 50 0 289 221 26 115 chr18 22860549 22860618 -63128316 + MER5A DNA MER1_type 10 67 -122 1974 122 0 23 chr18 22860618 22860922 -63128012 + AluSx SINE Alu 1 297 -15 289 221 26 115 chr18 22860922 22860965 -63127969 + MER5A DNA MER1_type 67 112 -77 24 32 0 0 chr18 22861048 22861079 -63127855 + AT_rich Low_complexity Low_complexity 1 31 0 201 252 262 10 chr18 22861197 22861300 -63127634 + L2 LINE L2 3136 3264 -8 324 0 0 0 chr18 22861531 22861567 -63127367 + (TA)n Simple_repeat Simple_repeat 2 37 0 2480 80 0 6 chr18 22861567 22861878 -63127056 - AluY SINE Alu -2 309 1 196 393 65 5 chr18 22861970 22862171 -63126763 - MIR SINE MIR -30 232 20 268 323 211 0 chr18 22862221 22862444 -63126490 - L1ME LINE L1 -316 5805 5536 2243 113 3 0 chr18 22862731 22863033 -63125901 - AluSx SINE Alu -9 303 1 219 187 13 27 chr18 22863183 22863258 -63125676 + CT-rich Low_complexity Low_complexity 3 76 0 650 109 33 0 chr18 22863500 22863592 -63125342 + L1MA3 LINE L1 6211 6305 0 21 0 0 0 chr18 22864013 22864034 -63124900 + AT_rich Low_complexity Low_complexity 1 21 0 266 245 0 0 chr18 22864917 22864970 -63123964 - L2 LINE L2 -5 3267 3215 182 309 0 59 chr18 22865122 22865190 -63123744 - L2 LINE L2 0 3313 3250 2014 151 20 0 chr18 22865928 22866227 -63122707 + AluJb SINE Alu 1 305 -7 2214 116 3 3 chr18 22866230 22866531 -63122403 + AluSq SINE Alu 1 301 -12 391 320 120 0 chr18 22867515 22867690 -63121244 - L2 LINE L2 -5 3308 3113 309 289 50 25 chr18 22867926 22868047 -63120887 + L2 LINE L2 3149 3272 0 5448 147 31 14 chr18 22870367 22871480 -63117454 - L1MB3 LINE L1 -1 6182 5049 954 141 0 0 chr18 22872496 22872624 -63116310 - FLAM_C SINE Alu -5 128 1 853 276 12 32 chr18 22872624 22872964 -63115970 - L1MC5 LINE L1 -26 7935 7603 1624 270 95 45 chr18 22873018 22873418 -63115516 - L1ME3 LINE L1 -63 6099 5720 3964 122 4 6 chr18 22873418 22873967 -63114967 + L1PA15 LINE L1 5607 6154 -11 1624 270 95 45 chr18 22873967 22874014 -63114920 - L1ME3 LINE L1 -442 5720 5677 1939 137 25 0 chr18 22874014 22874299 -63114635 + AluSx SINE Alu 1 292 -20 1624 270 95 45 chr18 22874299 22874753 -63114181 - L1ME3 LINE L1 -485 5677 5149 287 266 11 0 chr18 22874754 22874848 -63114086 - L1ME3 LINE L1 -1407 4739 4645 * 5233 102 9 31 chr18 22874845 22875393 -63113541 - L1PA13 LINE L1 -4 6159 5600 2304 101 67 48 chr18 22875393 22875750 -63113184 - THE1B LTR MaLR 0 364 1 5233 102 9 31 chr18 22875750 22875949 -63112985 - L1PA13 LINE L1 -563 5600 5428 2263 86 33 3 chr18 22875949 22876250 -63112684 - AluSx SINE Alu -2 310 1 5233 102 9 31 chr18 22876250 22876294 -63112640 - L1PA13 LINE L1 -735 5428 5385 22 0 0 0 chr18 22876869 22876891 -63112043 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr18 22877236 22877259 -63111675 + (A)n Simple_repeat Simple_repeat 1 23 0 1997 132 3 3 chr18 22877264 22877559 -63111375 + AluSx SINE Alu 1 295 -17 274 297 33 22 chr18 22878450 22878541 -63110393 + L1MC/D LINE L1 5602 5693 -2115 2052 134 0 3 chr18 22879157 22879456 -63109478 - AluSx SINE Alu -14 298 1 186 71 0 0 chr18 22881619 22881647 -63107287 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 259 304 35 9 chr18 22882880 22882995 -63105939 + L2 LINE L2 2491 2608 -706 1884 156 35 66 chr18 22883041 22883388 -63105546 + MER1B DNA MER1_type 2 337 0 180 219 24 0 chr18 22883510 22883551 -63105383 + L2 LINE L2 2936 2977 -337 219 322 207 11 chr18 22883789 22883963 -63104971 - MIR SINE MIR -2 260 53 2007 110 7 0 chr18 22886205 22886478 -63102456 + AluSx SINE Alu 1 275 -37 216 0 0 0 chr18 22886480 22886504 -63102430 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 2032 130 3 3 chr18 22886569 22886869 -63102065 - AluSg SINE Alu -10 300 1 376 227 165 0 chr18 22886912 22887009 -63101925 - L2 LINE L2 0 3272 3160 2068 130 0 10 chr18 22887938 22888239 -63100695 - AluSx SINE Alu -14 298 1 1842 134 41 21 chr18 22889172 22889462 -63099472 - AluJo SINE Alu -16 296 1 263 374 58 45 chr18 22889627 22889782 -63099152 - L2 LINE L2 -17 3255 3099 956 57 81 0 chr18 22889971 22890095 -63098839 - MER85 DNA T2_type 0 139 6 6734 50 1 0 chr18 22890179 22890955 -63097979 + L1PA5 LINE L1 5378 6154 0 1867 152 3 34 chr18 22891036 22891358 -63097576 + AluJb SINE Alu 1 312 0 2026 93 0 11 chr18 22891655 22891923 -63097011 - AluSq SINE Alu -48 265 1 256 299 15 30 chr18 22893170 22893304 -63095630 + L2 LINE L2 3160 3291 -22 205 306 93 28 chr18 22893611 22893719 -63095215 + L2 LINE L2 3199 3313 0 411 237 97 0 chr18 22893965 22894058 -63094876 - MER68 LTR ERV1 -4 558 457 2301 178 45 20 chr18 22894164 22894608 -63094326 - MER68 LTR ERV1 -107 455 1 2027 166 0 0 chr18 22895438 22895745 -63093189 - AluJb SINE Alu -5 307 1 190 285 114 32 chr18 22895924 22896047 -63092887 - L2 LINE L2 0 3313 3181 1093 79 13 40 chr18 22897659 22897811 -63091123 - AluSg/x SINE Alu -10 299 152 24 32 0 0 chr18 22898012 22898043 -63090891 + AT_rich Low_complexity Low_complexity 1 31 0 354 331 22 33 chr18 22899169 22899350 -63089584 - MIR SINE MIR -11 251 73 2250 114 0 3 chr18 22899845 22900151 -63088783 + AluSx SINE Alu 1 305 -7 1873 139 3 29 chr18 22900298 22900608 -63088326 - AluJo SINE Alu -10 302 1 383 255 131 103 chr18 22903085 22903226 -63085708 - MARNA DNA Mariner -15 571 435 1888 89 0 0 chr18 22903226 22903461 -63085473 - AluSg/x SINE Alu -10 302 68 383 255 131 103 chr18 22903461 22903861 -63085073 - MARNA DNA Mariner -151 435 15 1283 198 85 80 chr18 22906105 22906441 -63082493 + L1MB8 LINE L1 4504 4844 -1302 2366 104 0 0 chr18 22906441 22906750 -63082184 - AluSx SINE Alu -3 309 1 1283 198 85 80 chr18 22906750 22906813 -63082121 + L1MB8 LINE L1 4844 4905 -1241 1429 193 41 4 chr18 22906813 22907082 -63081852 + AluJb SINE Alu 1 279 -33 3545 166 102 66 chr18 22907082 22907451 -63081483 + L1MB8 LINE L1 4916 5270 -908 2489 82 0 13 chr18 22907451 22907766 -63081168 + AluY SINE Alu 1 311 0 3545 166 102 66 chr18 22907766 22908447 -63080487 + L1MB8 LINE L1 5270 6039 -139 1266 182 186 0 chr18 22908447 22908689 -63080245 + AluJb SINE Alu 1 287 -15 3545 166 102 66 chr18 22908689 22908829 -63080105 + L1MB8 LINE L1 6039 6172 -6 2546 57 0 0 chr18 22908842 22909139 -63079795 + AluY SINE Alu 1 297 -14 16047 122 15 9 chr18 22909241 22911061 -63077873 - Tigger1 DNA MER2_type 0 2418 580 2216 127 0 0 chr18 22911061 22911368 -63077566 + AluSq SINE Alu 1 307 -6 16047 122 15 9 chr18 22911368 22911930 -63077004 - Tigger1 DNA MER2_type -1838 580 23 8807 106 42 6 chr18 22912409 22913660 -63075274 - HSMAR2 DNA Mariner -2 1300 5 29 0 0 0 chr18 22913699 22913728 -63075206 + AT_rich Low_complexity Low_complexity 1 29 0 643 199 3 38 chr18 22914002 22914271 -63074663 + CT-rich Low_complexity Low_complexity 1 259 0 2150 125 3 0 chr18 22914272 22914576 -63074358 - AluSx SINE Alu -7 305 1 279 0 0 0 chr18 22914650 22914681 -63074253 + (TG)n Simple_repeat Simple_repeat 2 32 0 376 123 27 0 chr18 22914681 22914754 -63074180 + (TA)n Simple_repeat Simple_repeat 1 75 0 339 25 0 0 chr18 22914758 22914798 -63074136 + (TG)n Simple_repeat Simple_repeat 2 41 0 1737 176 50 9 chr18 22914802 22915142 -63073792 - MLT1A1 LTR MaLR -11 354 1 343 280 120 27 chr18 22915969 22916194 -63072740 + MIR SINE MIR 16 261 -1 282 282 0 14 chr18 22916287 22916358 -63072576 + MIR3 SINE MIR 9 78 -130 261 194 71 82 chr18 22916586 22916684 -63072250 + MER103 DNA DNA 68 164 -2 195 321 0 36 chr18 22916738 22916794 -63072140 + L3 LINE CR1 1516 1569 -8 590 112 0 0 chr18 22916794 22916883 -63072051 + L1MB7 LINE L1 6087 6175 -9 24 32 0 0 chr18 22916937 22916968 -63071966 + AT_rich Low_complexity Low_complexity 1 31 0 708 154 16 8 chr18 22916970 22917093 -63071841 + AluJo/FLAM SINE Alu 1 124 -178 1002 81 0 0 chr18 22917093 22917216 -63071718 + AluSc SINE Alu 171 293 -16 183 200 75 0 chr18 22917653 22917693 -63071241 + MIR SINE MIR 107 149 -59 1830 141 28 3 chr18 22918472 22918763 -63070171 + AluJb SINE Alu 1 298 -14 887 275 131 45 chr18 22919345 22919577 -63069357 + L2 LINE L2 2553 2764 -549 2290 113 0 0 chr18 22919577 22919877 -63069057 - AluSx SINE Alu -12 300 1 887 275 131 45 chr18 22919877 22920321 -63068613 + L2 LINE L2 2764 3278 -35 408 82 0 0 chr18 22920329 22920390 -63068544 + (TG)n Simple_repeat Simple_repeat 1 61 0 222 191 0 0 chr18 22921136 22921183 -63067751 + (CA)n Simple_repeat Simple_repeat 1 47 0 2284 173 63 18 chr18 22921398 22921843 -63067091 - MLT1C LTR MaLR 0 467 3 2128 109 24 0 chr18 22922336 22922629 -63066305 - AluSx SINE Alu -11 301 2 237 65 0 0 chr18 22922932 22922963 -63065971 + (CA)n Simple_repeat Simple_repeat 2 32 0 2271 134 32 24 chr18 22923030 22923402 -63065532 + THE1C LTR MaLR 1 375 0 1204 139 10 24 chr18 22923411 22923620 -63065314 - AluJb SINE Alu -20 292 87 1041 160 97 110 chr18 22924705 22925005 -63063929 + AluJo SINE Alu 5 300 -2 2015 118 0 24 chr18 22925380 22925677 -63063257 + AluSx SINE Alu 1 290 -22 313 307 96 46 chr18 22925682 22925985 -63062949 + L1M4 LINE L1 3731 4048 -2098 237 315 54 0 chr18 22926198 22926328 -63062606 + L1P LINE L1 4299 4435 -1711 191 164 148 82 chr18 22926469 22926530 -63062404 - MIR SINE MIR -26 182 117 1890 95 4 8 chr18 22926653 22926906 -63062028 - AluSg SINE Alu -16 294 43 2238 109 3 0 chr18 22926947 22927240 -63061694 + AluSg SINE Alu 1 294 -16 1462 207 3 27 chr18 22927271 22927566 -63061368 + AluJo SINE Alu 1 288 -24 24 0 0 0 chr18 22927566 22927590 -63061344 + AT_rich Low_complexity Low_complexity 1 24 0 782 176 176 30 chr18 22927748 22927981 -63060953 - MLT1D LTR MaLR -147 358 92 423 285 76 19 chr18 22927997 22928155 -63060779 + MIR SINE MIR 21 187 -75 273 206 95 0 chr18 22928226 22928289 -63060645 + L2 LINE L2 3194 3262 -10 284 282 105 33 chr18 22930636 22930846 -63058088 + MIR SINE MIR 34 256 -6 193 227 23 0 chr18 22931619 22931663 -63057271 - MIR3 SINE MIR -13 195 151 1883 150 0 14 chr18 22931919 22932213 -63056721 + AluSx SINE Alu 1 290 -22 265 309 80 43 chr18 22932407 22932478 -63056456 + MIR SINE MIR 49 116 -146 1838 135 32 11 chr18 22932478 22932759 -63056175 - AluJb SINE Alu -7 305 19 265 309 80 43 chr18 22932759 22932875 -63056059 + MIR SINE MIR 116 243 -19 2432 107 0 0 chr18 22933079 22933389 -63055545 + AluSx SINE Alu 1 310 -2 1749 155 17 27 chr18 22934315 22934612 -63054322 - AluJb SINE Alu -15 297 4 1985 89 0 0 chr18 22935772 22936018 -63052916 + AluSc SINE Alu 44 289 -20 2652 174 39 11 chr18 22936193 22936739 -63052195 - L1MB3 LINE L1 -7 6176 5616 327 89 0 0 chr18 22936741 22936797 -63052137 + L1MC4 LINE L1 7930 8037 -5 2254 84 10 24 chr18 22936950 22937248 -63051686 + AluSp SINE Alu 1 294 -19 229 310 35 23 chr18 22937438 22937525 -63051409 + MIR SINE MIR 66 153 -55 2169 98 52 0 chr18 22937896 22938183 -63050751 + AluSc SINE Alu 1 302 -7 2168 122 0 0 chr18 22939041 22939366 -63049568 - AluSx SINE Alu 0 325 1 665 172 0 9 chr18 22939829 22939945 -63048989 - U5 snRNA snRNA -1 115 1 2448 86 3 0 chr18 22940550 22940851 -63048083 - AluSp SINE Alu -11 302 1 1754 184 3 7 chr18 22941565 22941875 -63047059 + AluJb SINE Alu 1 309 -3 329 279 74 74 chr18 22941942 22942293 -63046641 + MARNA DNA Mariner 182 532 -54 1004 157 11 22 chr18 22942293 22942471 -63046463 - FRAM SINE Alu 0 40 1 1718 152 39 32 chr18 22943165 22943475 -63045459 - AluJb SINE Alu 0 312 1 507 252 157 12 chr18 22943506 22943748 -63045186 + L2 LINE L2 2682 2958 -356 425 148 119 20 chr18 22943741 22943842 -63045092 + L2 LINE L2 3203 3313 0 * 186 133 0 0 chr18 22943848 22943878 -63045056 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 37 23 0 0 chr18 22944065 22944109 -63044825 + AT_rich Low_complexity Low_complexity 1 44 0 2394 102 0 0 chr18 22945151 22945455 -63043479 + AluSx SINE Alu 1 304 -8 31 0 0 0 chr18 22946085 22946116 -63042818 + AT_rich Low_complexity Low_complexity 1 31 0 1556 137 78 7 chr18 22946291 22946561 -63042373 - Tigger3(Golem) DNA MER2_type -1 3028 2740 1649 136 25 102 chr18 22946561 22946885 -63042049 + AluJb SINE Alu 1 299 -13 2054 116 27 23 chr18 22947090 22947391 -63041543 + AluSq SINE Alu 1 302 -11 23 0 0 0 chr18 22948507 22948530 -63040404 + AT_rich Low_complexity Low_complexity 1 23 0 255 273 36 52 chr18 22948668 22948850 -63040084 - MIR SINE MIR -50 212 34 21 57 0 0 chr18 22949566 22949601 -63039333 + AT_rich Low_complexity Low_complexity 1 35 0 2505 71 0 7 chr18 22949925 22950235 -63038699 - AluY SINE Alu -3 308 1 1915 148 16 10 chr18 22950652 22950956 -63037978 - AluSg1 SINE Alu -3 306 1 267 175 12 62 chr18 22951713 22951793 -63037141 - MER4-int LTR ERV1 -5430 1168 1093 225 245 48 25 chr18 22952256 22952344 -63036590 - MER5B DNA MER1_type -78 100 20 220 359 21 14 chr18 22952497 22952642 -63036292 - L2 LINE L2 -227 3045 2900 296 43 0 43 chr18 22953529 22953576 -63035358 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 2457 72 0 3 chr18 22953757 22954064 -63034870 - AluSg1 SINE Alu -2 307 2 257 146 182 0 chr18 22955385 22955440 -63033494 - MER20B DNA MER1_type -605 178 114 2429 45 23 16 chr18 22955579 22955887 -63033047 - AluY SINE Alu -1 310 1 4306 88 62 14 chr18 22956090 22956739 -63032195 - L1MA2 LINE L1 -6 6298 5619 2283 87 11 0 chr18 22957703 22957989 -63030945 + AluSg1 SINE Alu 1 289 -20 1953 78 39 4 chr18 22958445 22958703 -63030231 + AluY SINE Alu 35 301 -10 23 0 0 0 chr18 22959197 22959220 -63029714 + AT_rich Low_complexity Low_complexity 1 23 0 1390 165 61 15 chr18 22959220 22959481 -63029453 - AluJo SINE Alu -24 288 16 2114 129 0 0 chr18 22959559 22959854 -63029080 - AluSx SINE Alu -13 299 5 785 132 7 29 chr18 22960142 22960278 -63028656 + FLAM_C SINE Alu 1 133 0 187 224 119 15 chr18 22960841 22960908 -63028026 - L2 LINE L2 -5 3308 3235 378 279 28 26 chr18 22961684 22961886 -63027048 + L1MEc LINE L1 1307 1502 -4921 903 139 15 0 chr18 22962081 22962218 -63026716 + AluSg/x SINE Alu 153 291 -19 1089 218 127 36 chr18 22962224 22962674 -63026260 + L1MEc LINE L1 1968 2458 -4664 1344 174 162 12 chr18 22962674 22962933 -63026001 + AluJb SINE Alu 5 302 0 799 217 66 70 chr18 22962948 22963234 -63025700 + L1M4 LINE L1 3969 4253 -1893 255 188 109 16 chr18 22963493 22963557 -63025377 - MLT1L LTR MaLR -2 613 544 474 229 57 51 chr18 22963842 22963999 -63024935 - MER20B DNA MER1_type -625 158 1 5840 108 87 97 chr18 22964196 22965777 -63023157 - pTR5 LTR ERV1 0 2438 741 1964 44 4 0 chr18 22966429 22966657 -63022277 - AluY SINE Alu 0 311 83 2161 146 0 0 chr18 22967348 22967650 -63021284 - AluSx SINE Alu -10 302 1 426 273 91 19 chr18 22967938 22968092 -63020842 - MIR SINE MIR -51 211 47 21 57 0 0 chr18 22968264 22968299 -63020635 + AT_rich Low_complexity Low_complexity 1 35 0 1377 261 35 18 chr18 22968544 22968996 -63019938 - L1MCc LINE L1 -5200 1223 764 1551 219 37 30 chr18 22969015 22969444 -63019490 - L1MCc LINE L1 -5968 455 24 2366 104 0 3 chr18 22969482 22969789 -63019145 + AluSg SINE Alu 1 306 -4 820 107 18 0 chr18 22971165 22971277 -63017657 - FLAM_C SINE Alu -15 118 5 2275 110 3 0 chr18 22973976 22974277 -63014657 - AluSx SINE Alu -10 302 1 380 226 44 66 chr18 22976653 22976790 -63012144 - L2 LINE L2 -556 2758 2625 2355 84 10 0 chr18 22979391 22979688 -63009246 - AluSp SINE Alu -13 300 1 241 135 39 19 chr18 22979704 22979756 -63009178 - MIR SINE MIR -119 143 91 2330 126 61 21 chr18 22979831 22980080 -63008854 + L1M1 LINE L1 5327 5602 -701 2712 46 0 0 chr18 22980080 22980387 -63008547 - AluY SINE Alu -4 307 1 2330 126 61 21 chr18 22980387 22980565 -63008369 + L1M1 LINE L1 5602 5771 -532 224 227 45 15 chr18 22980984 22981050 -63007884 - MIR SINE MIR -181 81 14 609 234 112 25 chr18 22981242 22981439 -63007495 - MER20 DNA MER1_type -5 214 1 2108 122 3 3 chr18 22981474 22981770 -63007164 + AluSx SINE Alu 1 296 -16 623 106 10 39 chr18 22981777 22981881 -63007053 + L1MA3 LINE L1 6198 6298 -7 407 235 0 12 chr18 22983154 22983235 -63005699 + Tigger3(Golem) DNA MER2_type 1 80 -2949 545 172 43 0 chr18 22983366 22983459 -63005475 + Tigger3(Golem) DNA MER2_type 2919 3015 -14 303 288 144 0 chr18 22983491 22983609 -63005325 + L2 LINE L2 3172 3306 -7 885 123 0 0 chr18 22983773 22983887 -63005047 - FRAM SINE Alu -25 151 38 353 253 21 21 chr18 22985009 22985104 -63003830 - MER5A DNA MER1_type -74 115 21 445 291 151 5 chr18 22985125 22985331 -63003603 - MIR SINE MIR -14 248 13 952 99 0 0 chr18 22986162 22986283 -63002651 - 5S rRNA rRNA 0 121 1 1554 146 36 39 chr18 22986327 22986607 -63002327 - AluJo SINE Alu -33 279 1 2146 104 17 7 chr18 22986693 22986991 -63001943 - AluSg SINE Alu -9 301 1 220 374 0 8 chr18 22987315 22987438 -63001496 - MIR SINE MIR -57 151 30 2498 61 0 0 chr18 22987603 22987896 -63001038 - AluSg SINE Alu -15 295 3 3595 107 26 0 chr18 22988558 22989064 -62999870 + L1PA14 LINE L1 5643 6161 0 2351 90 0 0 chr18 22989065 22989364 -62999570 - AluSx SINE Alu -5 307 9 3095 204 51 67 chr18 22989401 22990016 -62998918 - L1ME1 LINE L1 -17 6543 5920 1400 178 22 0 chr18 22990016 22990247 -62998687 + MER46A DNA MER2_type 1 236 0 3095 204 51 67 chr18 22990247 22990431 -62998503 - L1ME1 LINE L1 -640 5920 5735 1648 164 10 27 chr18 22990431 22990730 -62998204 - AluJo SINE Alu -10 302 9 3095 204 51 67 chr18 22990730 22990759 -62998175 - L1ME1 LINE L1 -825 5735 5707 399 89 0 0 chr18 22990759 22990815 -62998119 + (TA)n Simple_repeat Simple_repeat 2 57 0 3095 204 51 67 chr18 22990815 22990830 -62998104 - L1ME1 LINE L1 -853 5707 5693 1902 164 0 16 chr18 22990830 22991147 -62997787 - AluJo SINE Alu 0 312 1 3095 204 51 67 chr18 22991147 22992048 -62996886 - L1ME1 LINE L1 -867 5693 4824 480 193 75 109 chr18 22992055 22992393 -62996541 - L1ME1 LINE L1 -5160 1380 920 466 342 40 20 chr18 22992918 22993222 -62995712 - L1ME1 LINE L1 -6197 343 34 213 39 0 0 chr18 22993865 22993891 -62995043 + (A)n Simple_repeat Simple_repeat 1 26 0 2113 124 7 3 chr18 22993952 22994250 -62994684 - AluSg SINE Alu -11 299 1 30 0 0 0 chr18 22994653 22994683 -62994251 + AT_rich Low_complexity Low_complexity 1 30 0 1447 158 162 8 chr18 22994689 22994955 -62993979 - 7SLRNA srpRNA srpRNA -13 307 1 1034 67 0 0 chr18 22994978 22995112 -62993822 + L1PA4 LINE L1 6021 6154 -1 240 35 0 0 chr18 22996121 22996150 -62992784 + (TG)n Simple_repeat Simple_repeat 2 30 0 2317 56 0 11 chr18 22996252 22996537 -62992397 + AluY SINE Alu 1 282 -29 1055 197 118 98 chr18 22997295 22997661 -62991273 + MER93b LTR ERV1 1 373 0 224 29 0 29 chr18 22997728 22997762 -62991172 + (AAATG)n Simple_repeat Simple_repeat 5 37 0 2127 127 0 22 chr18 22998520 22998835 -62990099 - AluSx SINE Alu -4 308 1 22 35 0 0 chr18 22998912 22998941 -62989993 + AT_rich Low_complexity Low_complexity 1 29 0 2428 89 0 9 chr18 22999079 22999395 -62989539 - AluSq SINE Alu 0 313 1 385 234 143 32 chr18 22999533 22999687 -62989247 + MIR SINE MIR 1 171 -91 328 237 7 86 chr18 22999815 22999954 -62988980 - L1ME LINE L1 -473 5648 5521 275 146 0 21 chr18 23000018 23000066 -62988868 - L2 LINE L2 -5 3308 3262 221 273 18 73 chr18 23000094 23000204 -62988730 + L2 LINE L2 2957 3060 -212 2609 151 90 24 chr18 23000615 23000978 -62987956 + L1MC1 LINE L1 5764 6178 -155 2243 88 27 3 chr18 23000978 23001274 -62987660 - AluSg SINE Alu -3 307 5 2609 151 90 24 chr18 23001274 23001441 -62987493 + L1MC1 LINE L1 6178 6333 0 1668 187 17 3 chr18 23001449 23001743 -62987191 + AluJo SINE Alu 1 298 -14 578 215 59 73 chr18 23001748 23002036 -62986898 + MER69 DNA AcHobo 2143 2426 -100 552 288 87 9 chr18 23002042 23002261 -62986673 + L1ME4a LINE L1 5877 6112 -9 2156 96 0 0 chr18 23002293 23002563 -62986371 + AluSg SINE Alu 11 280 -30 213 39 0 0 chr18 23002646 23002672 -62986262 + (T)n Simple_repeat Simple_repeat 1 26 0 466 342 40 20 chr18 23003314 23003618 -62985316 + L1ME LINE L1 34 343 -6197 498 190 75 109 chr18 23004143 23004481 -62984453 + L1ME LINE L1 920 1380 -5160 3095 202 20 80 chr18 23004488 23005389 -62983545 + L1ME LINE L1 4824 5777 -783 1785 161 0 11 chr18 23005389 23005674 -62983260 + AluJo SINE Alu 1 282 -30 3095 202 20 80 chr18 23005674 23005722 -62983212 + L1ME LINE L1 5777 5826 -734 399 89 0 0 chr18 23005722 23005778 -62983156 + (TA)n Simple_repeat Simple_repeat 2 57 0 3095 202 20 80 chr18 23005778 23005807 -62983127 + L1ME LINE L1 5826 5855 -705 1627 164 10 27 chr18 23005807 23006100 -62982834 + AluJo SINE Alu 9 296 -16 3095 202 20 80 chr18 23006100 23006292 -62982642 + L1ME LINE L1 5855 5925 -635 791 143 0 0 chr18 23006405 23006510 -62982424 - FLAM_C SINE Alu -36 107 3 1355 203 81 31 chr18 23006513 23006635 -62982299 - Charlie1b DNA MER1_type -2306 455 341 2170 117 0 7 chr18 23006635 23006944 -62981990 - AluSx SINE Alu -5 307 1 1355 203 81 31 chr18 23006944 23007240 -62981694 - Charlie1b DNA MER1_type -2420 341 16 233 139 5 16 chr18 23007358 23007576 -62981358 + AluSx SINE Alu 1 270 -32 1997 157 0 0 chr18 23007842 23008142 -62980792 + AluSg SINE Alu 11 310 0 989 190 32 9 chr18 23008409 23008630 -62980304 + L1MB3 LINE L1 5957 6182 -1 658 311 105 0 chr18 23008638 23008857 -62980077 + MIR SINE MIR 20 261 -1 792 264 64 94 chr18 23011435 23011890 -62977044 + Charlie2 DNA MER1_type 104 544 -2238 2127 224 102 104 chr18 23012014 23013270 -62975664 + Charlie2a DNA MER1_type 1477 2729 -133 2273 107 0 3 chr18 23014410 23014710 -62974224 + AluSx SINE Alu 1 299 -13 298 274 144 60 chr18 23015458 23015659 -62973275 - MER112 DNA MER1_type -2 258 41 455 307 58 22 chr18 23015853 23016078 -62972856 - MIR SINE MIR 0 262 30 1701 178 16 7 chr18 23016222 23016531 -62972403 + AluJo SINE Alu 1 312 0 1966 102 49 21 chr18 23016896 23017180 -62971754 - AluSc SINE Alu -17 292 1 1750 148 21 14 chr18 23018108 23018392 -62970542 + AluSx SINE Alu 1 286 -26 180 0 0 0 chr18 23020277 23020297 -62968637 + (CCAA)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr18 23020353 23020374 -62968560 + AT_rich Low_complexity Low_complexity 1 21 0 2069 134 0 3 chr18 23021046 23021353 -62967581 + AluSx SINE Alu 1 306 -6 899 242 1 6 chr18 23021607 23021826 -62967108 + L1MC5 LINE L1 6650 6886 -1109 2146 133 3 0 chr18 23022075 23022377 -62966557 - AluSx SINE Alu -5 307 5 355 238 47 15 chr18 23022382 23022512 -62966422 + L1MC5 LINE L1 7103 7243 -747 1147 228 56 99 chr18 23022651 23023124 -62965810 + L1MC5 LINE L1 7276 7768 -193 735 124 29 9 chr18 23023124 23023229 -62965705 + U6 snRNA snRNA 1 107 0 1182 110 51 64 chr18 23023232 23023267 -62965667 + L1MA8 LINE L1 6047 6081 -210 2249 102 0 7 chr18 23023267 23023570 -62965364 - AluSx SINE Alu -11 301 1 1182 110 51 64 chr18 23023570 23023770 -62965164 + L1MA8 LINE L1 6081 6279 -12 1147 228 56 99 chr18 23023770 23023835 -62965099 + L1MC5 LINE L1 7770 7836 -125 1704 183 3 3 chr18 23023835 23024135 -62964799 + AluJo SINE Alu 1 300 -12 1147 228 56 99 chr18 23024135 23024270 -62964664 + L1MC5 LINE L1 7836 7925 -36 1633 148 112 7 chr18 23025793 23026070 -62962864 - AluSg1 SINE Alu -3 306 1 256 313 62 15 chr18 23026502 23026697 -62962237 - L1P LINE L1 -1056 5090 4887 268 250 181 52 chr18 23027036 23027284 -62961650 - L1M4 LINE L1 -2017 4129 3850 2114 136 3 0 chr18 23030648 23030958 -62957976 + AluSx SINE Alu 1 311 -1 2463 74 3 3 chr18 23031359 23031670 -62957264 - AluSq SINE Alu -2 311 1 22 0 0 0 chr18 23033531 23033553 -62955381 + AT_rich Low_complexity Low_complexity 1 22 0 1703 143 13 36 chr18 23033661 23033969 -62954965 + AluJo SINE Alu 1 301 -11 227 250 0 83 chr18 23034224 23034320 -62954614 - MIR SINE MIR -140 122 35 2315 87 0 3 chr18 23034868 23035155 -62953779 - AluSx SINE Alu -8 304 19 2091 117 3 0 chr18 23035575 23035865 -62953069 - AluSq SINE Alu -22 291 1 349 267 70 53 chr18 23036614 23036944 -62951990 - L1ME LINE L1 -496 5668 5333 339 259 83 28 chr18 23037614 23037722 -62951212 - MIR SINE MIR -2 260 147 346 299 98 12 chr18 23037770 23037934 -62951000 + MIR SINE MIR 30 207 -55 23 0 0 0 chr18 23038109 23038132 -62950802 + AT_rich Low_complexity Low_complexity 1 23 0 2208 113 0 0 chr18 23038478 23038778 -62950156 - AluSx SINE Alu -10 302 3 266 263 140 18 chr18 23039478 23039592 -62949342 + L2 LINE L2 3143 3270 -2 2220 88 0 0 chr18 23039699 23039973 -62948961 - AluSx SINE Alu -38 274 1 1703 161 4 0 chr18 23040367 23040634 -62948300 - AluSx SINE Alu -44 268 1 962 221 103 51 chr18 23041588 23042120 -62946814 + L1ME LINE L1 5072 5636 -528 21 57 0 0 chr18 23042662 23042697 -62946237 + AT_rich Low_complexity Low_complexity 1 35 0 185 288 27 27 chr18 23042824 23042897 -62946037 - MIR SINE MIR -106 102 30 2210 113 7 0 chr18 23043268 23043568 -62945366 - AluSx SINE Alu -10 302 1 758 169 107 17 chr18 23044383 23044459 -62944475 + Charlie5 DNA MER1_type 6 74 -2550 2328 94 3 3 chr18 23044459 23044767 -62944167 - AluSg SINE Alu -2 308 1 758 169 107 17 chr18 23044767 23044868 -62944066 + Charlie5 DNA MER1_type 74 199 -2425 861 147 124 14 chr18 23044877 23045095 -62943839 + Charlie5 DNA MER1_type 2330 2571 -41 415 222 20 0 chr18 23045101 23045200 -62943734 - MER20 DNA MER1_type -2 217 117 246 266 198 34 chr18 23045221 23045398 -62943536 - L3 LINE CR1 -90 1487 1282 344 299 85 43 chr18 23045448 23045659 -62943275 - L2 LINE L2 -13 3300 3081 2163 127 0 3 chr18 23045890 23046198 -62942736 + AluSx SINE Alu 1 307 -5 578 204 99 11 chr18 23048054 23048245 -62940689 + L1ME2 LINE L1 3115 3322 -2824 1562 254 114 7 chr18 23048249 23048803 -62940131 + L1ME2 LINE L1 5550 6162 -2 824 205 31 6 chr18 23048914 23049075 -62939859 + MLT1D LTR MaLR 1 165 -340 878 184 161 16 chr18 23049133 23049388 -62939546 - L1MB1 LINE L1 -180 6009 5718 262 282 71 12 chr18 23050625 23050710 -62938224 - MIR SINE MIR -20 242 153 466 130 39 0 chr18 23051165 23051242 -62937692 + AluJ/FRAM SINE Alu 219 298 -14 354 150 0 0 chr18 23051262 23051322 -62937612 + Alu SINE Alu 243 302 0 38 22 0 0 chr18 23051322 23051367 -62937567 + AT_rich Low_complexity Low_complexity 1 45 0 1903 86 97 8 chr18 23051633 23051900 -62937034 - AluSp SINE Alu -9 304 14 370 311 70 56 chr18 23052019 23052305 -62936629 - L2 LINE L2 -174 3139 2850 1910 150 0 7 chr18 23052759 23053065 -62935869 - AluJb SINE Alu -8 304 1 311 316 68 8 chr18 23053770 23053887 -62935047 - MIR SINE MIR -130 132 9 383 360 20 0 chr18 23054977 23055127 -62933807 + MIR3 SINE MIR 50 202 -6 658 300 170 17 chr18 23058747 23059094 -62929840 + L2 LINE L2 706 1105 -2209 757 244 61 64 chr18 23059112 23059307 -62929627 - MLT1B LTR MaLR -32 358 164 1047 97 0 0 chr18 23059307 23059461 -62929473 + (TTC)n Simple_repeat Simple_repeat 2 155 0 1653 177 7 0 chr18 23059463 23059740 -62929194 - AluJo SINE Alu -33 279 1 757 244 61 64 chr18 23059740 23059885 -62929049 - MLT1B LTR MaLR -227 163 16 621 299 116 4 chr18 23059886 23060154 -62928780 + L2 LINE L2 1058 1355 -1959 2095 133 0 0 chr18 23061171 23061457 -62927477 + AluSx SINE Alu 1 286 -26 29 0 0 0 chr18 23061457 23061486 -62927448 + AT_rich Low_complexity Low_complexity 1 29 0 451 127 25 0 chr18 23061983 23062062 -62926872 + Tigger1 DNA MER2_type 148 228 -2190 6909 68 5 7 chr18 23062062 23063224 -62925710 - L1PA6 LINE L1 -7 6147 4994 260 238 315 14 chr18 23065636 23065779 -62923155 - MIR SINE MIR 0 262 77 23 0 0 0 chr18 23065986 23066009 -62922925 + AT_rich Low_complexity Low_complexity 1 23 0 395 200 70 10 chr18 23066916 23067016 -62921918 + MER103 DNA DNA 3 108 -58 23 0 0 0 chr18 23067060 23067083 -62921851 + AT_rich Low_complexity Low_complexity 1 23 0 192 198 25 12 chr18 23068444 23068525 -62920409 + (TA)n Simple_repeat Simple_repeat 2 83 0 307 209 33 55 chr18 23068818 23068909 -62920025 - L1MC4 LINE L1 -1339 6703 6615 282 267 0 0 chr18 23068912 23069002 -62919932 + (TA)n Simple_repeat Simple_repeat 2 91 0 243 276 23 0 chr18 23069006 23069093 -62919841 + L1MC4 LINE L1 6614 6702 -1340 596 251 11 0 chr18 23069116 23069291 -62919643 + (CATATA)n Simple_repeat Simple_repeat 2 178 0 440 358 0 0 chr18 23069302 23069422 -62919512 + (CA)n Simple_repeat Simple_repeat 2 121 0 251 307 0 16 chr18 23069431 23069558 -62919376 + (CATATA)n Simple_repeat Simple_repeat 3 127 0 596 219 6 17 chr18 23069565 23069743 -62919191 + (TA)n Simple_repeat Simple_repeat 1 176 0 207 318 0 0 chr18 23069743 23069809 -62919125 + (CATA)n Simple_repeat Simple_repeat 1 66 0 329 317 234 0 chr18 23070045 23070190 -62918744 - L2 LINE L2 -2883 431 253 189 94 0 0 chr18 23070385 23070417 -62918517 + (T)n Simple_repeat Simple_repeat 1 32 0 761 153 0 0 chr18 23070708 23070832 -62918102 + FLAM_C SINE Alu 2 125 -8 30 27 0 0 chr18 23070833 23070870 -62918064 + AT_rich Low_complexity Low_complexity 1 37 0 335 325 56 15 chr18 23071016 23071213 -62917721 - L1ME LINE L1 -393 5728 5524 489 263 96 33 chr18 23072174 23072524 -62916410 + L1MEc LINE L1 1450 1982 -4581 23 33 0 0 chr18 23072789 23072819 -62916115 + AT_rich Low_complexity Low_complexity 1 30 0 736 312 103 15 chr18 23072923 23074091 -62914843 + L1MEc LINE L1 2386 3655 -2727 224 333 24 0 chr18 23076712 23076796 -62912138 + GA-rich Low_complexity Low_complexity 3 88 0 395 285 24 0 chr18 23077799 23077922 -62911012 + MIR SINE MIR 129 254 -8 763 29 10 10 chr18 23078416 23078519 -62910415 + (TTCC)n Simple_repeat Simple_repeat 2 104 0 21 0 0 0 chr18 23079682 23079703 -62909231 + AT_rich Low_complexity Low_complexity 1 21 0 461 256 61 39 chr18 23080793 23080973 -62907961 - MIR SINE MIR -71 191 8 27 0 0 0 chr18 23081198 23081225 -62907709 + AT_rich Low_complexity Low_complexity 1 27 0 32 26 0 0 chr18 23081384 23081423 -62907511 + AT_rich Low_complexity Low_complexity 1 39 0 2162 131 0 0 chr18 23081780 23082078 -62906856 + AluSx SINE Alu 1 298 -14 282 95 0 0 chr18 23082574 23082616 -62906318 + (CA)n Simple_repeat Simple_repeat 1 42 0 261 83 0 0 chr18 23082617 23082653 -62906281 + (TC)n Simple_repeat Simple_repeat 1 36 0 3978 234 50 18 chr18 23083378 23083535 -62905399 + L1M4 LINE L1 623 774 -5872 387 0 0 0 chr18 23083535 23083578 -62905356 + (CA)n Simple_repeat Simple_repeat 2 44 0 3978 234 50 18 chr18 23083578 23084685 -62904249 + L1M4 LINE L1 774 1933 -4713 346 340 61 12 chr18 23084682 23085026 -62903908 - L1M4 LINE L1 -1328 4818 4458 * 1609 173 12 0 chr18 23085044 23085298 -62903636 + AluJb SINE Alu 9 265 -47 2932 244 39 17 chr18 23085398 23086095 -62902839 + MER21B LTR ERV1 108 819 -44 234 336 100 23 chr18 23086124 23086344 -62902590 + L2 LINE L2 2817 3053 -219 1164 199 17 112 chr18 23086374 23086777 -62902157 + MLT1A1 LTR MaLR 1 365 0 191 250 100 17 chr18 23086935 23086995 -62901939 + L2 LINE L2 3188 3252 -20 200 286 0 18 chr18 23087790 23087846 -62901088 + L2 LINE L2 3187 3241 -72 262 314 76 9 chr18 23088000 23088098 -62900836 - L2 LINE L2 -20 3252 3145 1094 210 23 0 chr18 23088098 23088312 -62900622 + MER20 DNA MER1_type 1 219 0 334 308 117 22 chr18 23088457 23088817 -62900117 - L2 LINE L2 -1053 2261 1868 412 258 171 14 chr18 23088914 23089270 -62899664 + L1ME4a LINE L1 5709 6120 -1 300 172 0 0 chr18 23089354 23089412 -62899522 + (TG)n Simple_repeat Simple_repeat 2 59 0 557 324 78 31 chr18 23089417 23089902 -62899032 - L2 LINE L2 -1619 1695 1188 328 286 95 8 chr18 23090860 23090986 -62897948 - L2 LINE L2 -687 2627 2491 469 303 6 56 chr18 23091026 23091204 -62897730 + MIR SINE MIR 94 262 0 209 217 0 0 chr18 23091318 23091364 -62897570 + (TA)n Simple_repeat Simple_repeat 2 47 0 356 189 0 22 chr18 23091694 23091784 -62897150 + (TATG)n Simple_repeat Simple_repeat 1 88 0 2590 109 3 8 chr18 23091933 23092299 -62896635 + THE1B LTR MaLR 1 364 0 422 197 0 0 chr18 23092396 23092472 -62896462 + AluJ/FLAM SINE Alu 1 76 -236 296 361 66 0 chr18 23092519 23092641 -62896293 + L2 LINE L2 3143 3272 0 201 403 13 0 chr18 23093098 23093175 -62895759 - L2 LINE L2 -20 3252 3175 49 0 0 0 chr18 23096007 23096056 -62892878 + AT_rich Low_complexity Low_complexity 1 49 0 369 0 0 0 chr18 23096888 23096929 -62892005 + (TG)n Simple_repeat Simple_repeat 2 42 0 183 42 0 0 chr18 23097166 23097190 -62891744 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 221 255 0 0 chr18 23097866 23097913 -62891021 + A-rich Low_complexity Low_complexity 1 47 0 426 341 108 33 chr18 23100888 23101340 -62887594 - L2 LINE L2 -629 2685 2200 300 91 0 0 chr18 23104081 23104125 -62884809 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 22 80 0 0 chr18 23104663 23104713 -62884221 + AT_rich Low_complexity Low_complexity 1 50 0 1629 160 36 26 chr18 23104869 23105176 -62883758 + AluJo SINE Alu 1 310 -2 46 33 0 0 chr18 23105487 23105547 -62883387 + AT_rich Low_complexity Low_complexity 1 60 0 383 273 47 41 chr18 23105597 23105769 -62883165 + Charlie7 DNA MER1_type 59 231 -2381 1620 217 25 95 chr18 23105774 23106208 -62882726 + L1M4 LINE L1 4727 5103 -1043 2350 109 0 0 chr18 23106208 23106519 -62882415 + AluSx SINE Alu 1 311 -1 1620 217 25 95 chr18 23106519 23106724 -62882210 + L1M4 LINE L1 5103 5321 -825 556 179 117 7 chr18 23106737 23106882 -62882052 + L1M4 LINE L1 5295 5455 -729 210 356 0 0 chr18 23107237 23107310 -62881624 + C-rich Low_complexity Low_complexity 6 78 0 405 261 51 67 chr18 23107310 23107505 -62881429 + L2 LINE L2 1806 1997 -1317 2051 130 0 3 chr18 23107924 23108217 -62880717 + AluSx SINE Alu 1 292 -20 2249 109 0 0 chr18 23108750 23109054 -62879880 - AluSg SINE Alu -6 304 1 311 161 32 0 chr18 23109055 23109117 -62879817 + Charlie1 DNA MER1_type 2697 2760 -1 1324 249 49 9 chr18 23109171 23109600 -62879334 - L1ME2 LINE L1 -10 6154 5709 218 365 71 24 chr18 23110139 23110224 -62878710 - L2 LINE L2 -50 3222 3134 790 168 144 48 chr18 23110638 23110888 -62878046 + ORSL DNA AcHobo 2 275 0 2864 161 62 10 chr18 23111215 23111735 -62877199 + MER7C DNA MER2_type 1 547 -55 199 386 0 23 chr18 23111812 23111900 -62877034 - L2 LINE L2 -219 3053 2968 249 182 74 116 chr18 23112607 23112728 -62876206 + L2 LINE L2 3198 3313 0 333 125 0 0 chr18 23114844 23114900 -62874034 + (TG)n Simple_repeat Simple_repeat 2 57 0 22 0 0 0 chr18 23115057 23115079 -62873855 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr18 23115366 23115398 -62873536 + AT_rich Low_complexity Low_complexity 1 32 0 289 229 149 69 chr18 23116056 23116409 -62872525 - MLT1H LTR MaLR -12 537 124 195 69 0 0 chr18 23116883 23116912 -62872022 + (A)n Simple_repeat Simple_repeat 1 29 0 216 306 36 108 chr18 23117304 23117415 -62871519 + MIR SINE MIR 20 122 -86 786 177 63 29 chr18 23119331 23119506 -62869428 - MLT1D LTR MaLR -2 503 323 * 866 218 71 36 chr18 23119473 23119725 -62869209 - MLT1E2 LTR MaLR -207 419 159 5317 198 59 15 chr18 23119725 23121127 -62867807 - L1MB8 LINE L1 -2113 4828 3365 2737 172 66 16 chr18 23121128 23121167 -62867767 + L1MB8 LINE L1 4857 4893 -2048 617 167 9 184 chr18 23121167 23121400 -62867534 - 7SK RNA RNA 0 193 2 2737 172 66 16 chr18 23121400 23121969 -62866965 + L1MB8 LINE L1 4893 5495 -1446 228 241 0 0 chr18 23121977 23122035 -62866899 + A-rich Low_complexity Low_complexity 5 62 0 599 285 66 38 chr18 23122171 23122852 -62866082 - L1MCc LINE L1 -4804 2137 1279 195 42 0 0 chr18 23123130 23123154 -62865780 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1660 65 5 5 chr18 23126511 23126725 -62862209 - AluY SINE Alu -10 301 88 3067 178 44 30 chr18 23126835 23127237 -62861697 + L1MB8 LINE L1 6288 6706 -267 2085 127 0 3 chr18 23127237 23127544 -62861390 + AluSx SINE Alu 2 307 -5 3067 178 44 30 chr18 23127544 23127816 -62861118 + L1MB8 LINE L1 6706 6972 -1 268 169 69 31 chr18 23127861 23127991 -62860943 + Charlie7 DNA MER1_type 2410 2544 -68 2060 108 4 0 chr18 23128067 23128344 -62860590 + AluSq SINE Alu 30 307 -6 189 0 0 0 chr18 23128758 23128779 -62860155 + (A)n Simple_repeat Simple_repeat 1 21 0 22 0 0 0 chr18 23129945 23129967 -62858967 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr18 23130428 23130452 -62858482 + AT_rich Low_complexity Low_complexity 1 24 0 641 355 69 46 chr18 23130846 23131235 -62857699 - L2 LINE L2 0 3272 2875 259 213 213 0 chr18 23131712 23131787 -62857147 + L2 LINE L2 3223 3313 0 219 295 18 54 chr18 23132242 23132378 -62856556 - MIR SINE MIR -50 212 81 331 273 50 0 chr18 23132388 23132487 -62856447 + MER5A DNA MER1_type 9 112 -77 306 307 30 0 chr18 23132824 23132925 -62856009 - MIR SINE MIR -59 203 100 379 268 163 0 chr18 23134420 23134543 -62854391 + MIR SINE MIR 4 146 -116 445 265 29 0 chr18 23135674 23135810 -62853124 + L2 LINE L2 37 176 -3138 595 235 90 55 chr18 23135893 23136093 -62852841 + L2 LINE L2 3107 3313 0 1358 203 7 42 chr18 23136286 23136596 -62852338 + AluJo SINE Alu 2 300 -12 1207 116 16 0 chr18 23136951 23137140 -62851794 + Tigger1 DNA MER2_type 562 753 -1665 * 1383 169 48 0 chr18 23137135 23137407 -62851527 + Tigger1 DNA MER2_type 2134 2418 0 22 35 0 0 chr18 23137608 23137637 -62851297 + AT_rich Low_complexity Low_complexity 1 29 0 351 0 0 0 chr18 23138388 23138427 -62850507 + (TG)n Simple_repeat Simple_repeat 2 40 0 223 245 57 0 chr18 23140016 23140069 -62848865 - MIR SINE MIR -90 172 117 650 221 80 0 chr18 23141321 23141484 -62847450 + MER5B DNA MER1_type 3 178 0 412 354 17 17 chr18 23141911 23142086 -62846848 - MIR3 SINE MIR -4 204 30 31 26 0 0 chr18 23144230 23144268 -62844666 + AT_rich Low_complexity Low_complexity 1 38 0 3437 120 54 0 chr18 23144514 23145014 -62843920 + MER1A DNA MER1_type 1 527 0 819 234 121 7 chr18 23146383 23146673 -62842261 - MER5C DNA MER1_type -1 323 1 22 0 0 0 chr18 23147891 23147913 -62841021 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr18 23149646 23149666 -62839268 + (TTTG)n Simple_repeat Simple_repeat 4 23 0 1871 120 55 0 chr18 23150358 23150632 -62838302 + AluSg SINE Alu 1 289 -21 21 36 0 0 chr18 23150856 23150884 -62838050 + AT_rich Low_complexity Low_complexity 1 28 0 856 238 0 17 chr18 23152288 23152469 -62836465 - MER45A DNA AcHobo 0 178 1 26497 111 9 15 chr18 23153112 23157345 -62831589 - L1P LINE L1 -1927 4219 11 12178 139 22 18 chr18 23157355 23159546 -62829388 + Tigger1 DNA MER2_type 219 2418 0 210 356 0 0 chr18 23160734 23160807 -62828127 + C-rich Low_complexity Low_complexity 6 78 0 386 260 51 71 chr18 23160807 23161003 -62827931 + L2 LINE L2 1806 1997 -1317 2068 130 0 3 chr18 23161422 23161715 -62827219 + AluSx SINE Alu 1 292 -20 2426 89 0 3 chr18 23162248 23162552 -62826382 - AluSx SINE Alu -5 307 5 210 148 19 37 chr18 23162741 23162754 -62826180 + (CAAA)n Simple_repeat Simple_repeat 4 16 -40 902 177 5 0 chr18 23162754 23162940 -62825994 + L1MB3 LINE L1 5988 6174 -9 210 148 19 37 chr18 23162940 23162980 -62825954 + (CAAA)n Simple_repeat Simple_repeat 16 56 0 690 147 52 0 chr18 23163477 23163593 -62825341 + FLAM_A SINE Alu 1 122 -11 2065 122 17 0 chr18 23163796 23164091 -62824843 - AluSx SINE Alu -9 303 4 204 361 41 21 chr18 23165262 23165359 -62823575 - L2 LINE L2 -16 3256 3158 2118 121 0 13 chr18 23166145 23166451 -62822483 - AluSx SINE Alu -3 309 8 232 312 43 21 chr18 23166509 23166602 -62822332 - L2 LINE L2 -181 3091 2997 581 330 61 15 chr18 23167475 23167736 -62821198 - L2 LINE L2 -421 2893 2621 505 279 174 27 chr18 23167766 23167985 -62820949 - MIR SINE MIR 0 262 12 328 305 278 4 chr18 23167993 23168252 -62820682 - L2 LINE L2 -752 2562 2233 2071 173 126 9 chr18 23168255 23168707 -62820227 + MLT1D LTR MaLR 1 505 0 321 352 60 16 chr18 23168735 23168985 -62819949 - L2 LINE L2 -1677 1637 1377 367 184 0 61 chr18 23169226 23169324 -62819610 - MER117 DNA MER1_type -105 92 1 254 324 35 7 chr18 23169410 23169555 -62819379 + L1MC/D LINE L1 5739 5887 -1921 21 37 0 56 chr18 23169792 23169813 -62819121 + AT_rich Low_complexity Low_complexity 1 22 -29 1979 148 0 10 chr18 23169813 23170111 -62818823 - AluJb SINE Alu -17 295 1 21 37 0 56 chr18 23170111 23170143 -62818791 + AT_rich Low_complexity Low_complexity 22 51 0 664 214 50 20 chr18 23170986 23171190 -62817744 - MIR SINE MIR -12 250 42 25 31 0 0 chr18 23172267 23172299 -62816635 + AT_rich Low_complexity Low_complexity 1 32 0 2166 123 7 0 chr18 23172423 23172731 -62816203 - AluSx SINE Alu -2 310 1 6860 54 2 18 chr18 23173405 23174828 -62814106 + L1PA7 LINE L1 4762 6170 0 186 133 0 0 chr18 23174848 23174878 -62814056 + (A)n Simple_repeat Simple_repeat 1 30 0 1407 150 53 0 chr18 23175515 23175761 -62813173 + AluSx SINE Alu 49 307 -5 1678 151 27 14 chr18 23177609 23177901 -62811033 - AluJo SINE Alu -16 296 1 2165 111 0 7 chr18 23178439 23178748 -62810186 + AluSq SINE Alu 1 307 0 1935 264 195 76 chr18 23178851 23179024 -62809910 - L2 LINE L2 -508 2806 2655 2306 103 0 0 chr18 23179024 23179324 -62809610 + AluSx SINE Alu 5 304 -8 1935 264 195 76 chr18 23179324 23179983 -62808951 - L2 LINE L2 -659 2655 2076 1671 161 13 30 chr18 23179983 23180281 -62808653 - AluJb SINE Alu -19 293 1 1935 264 195 76 chr18 23180281 23180715 -62808219 - L2 LINE L2 -1238 2076 1388 19375 142 32 16 chr18 23181858 23182664 -62806270 + L1MA2 LINE L1 19 811 -6754 2023 131 3 0 chr18 23182664 23182978 -62805956 - AluSx SINE Alu 0 315 1 19375 142 32 16 chr18 23182978 23185932 -62803002 + L1MA2 LINE L1 811 3880 -3685 3119 161 32 75 chr18 23185932 23186653 -62802281 - LTR8 LTR ERV1 0 691 2 19375 142 32 16 chr18 23186653 23187847 -62801087 + L1MA2 LINE L1 3880 5054 -2511 586 133 0 10 chr18 23187858 23187956 -62800978 + MER4A LTR ERV1 2 98 -566 1358 140 48 24 chr18 23188008 23188258 -62800676 + MER4A LTR ERV1 372 627 -37 689 145 38 30 chr18 23188258 23188389 -62800545 - AluSg/x SINE Alu -12 297 166 1637 98 0 0 chr18 23188389 23188594 -62800340 - AluSx SINE Alu -105 207 3 294 106 21 0 chr18 23188596 23188643 -62800291 + MER4A LTR ERV1 617 664 0 8415 135 31 16 chr18 23188646 23191256 -62797678 + L1MA2 LINE L1 5075 7723 0 1940 64 110 14 chr18 23191429 23191710 -62797224 - AluYa5 SINE Alu -3 308 1 182 283 22 0 chr18 23191743 23191789 -62797145 + L2 LINE L2 3230 3276 -37 551 235 122 35 chr18 23191827 23192190 -62796744 + MLT1J LTR MaLR 1 473 -38 3572 179 70 26 chr18 23192341 23193319 -62795615 + L1MB5 LINE L1 5152 6168 -6 2042 203 28 50 chr18 23193360 23193936 -62794998 + L1ME1 LINE L1 5599 6161 -5 1715 166 0 60 chr18 23194053 23194367 -62794567 + AluJb SINE Alu 1 295 -17 1071 176 12 134 chr18 23195117 23195515 -62793419 - L1ME2 LINE L1 -44 6120 5772 324 127 70 0 chr18 23195862 23195933 -62793001 + L1MB3 LINE L1 6107 6182 -1 2175 107 3 7 chr18 23196149 23196439 -62792495 - AluSx SINE Alu -23 289 1 252 341 32 32 chr18 23197319 23197442 -62791492 + MIR SINE MIR 24 146 -116 22 35 0 0 chr18 23197647 23197676 -62791258 + AT_rich Low_complexity Low_complexity 1 29 0 2240 132 0 0 chr18 23197700 23198011 -62790923 + AluSx SINE Alu 1 311 -1 1075 274 87 47 chr18 23199624 23200491 -62788443 + L1M4 LINE L1 3299 4199 -1947 1974 157 0 13 chr18 23200609 23200922 -62788012 - AluJb SINE Alu -3 309 1 425 85 0 0 chr18 23200968 23201027 -62787907 + L1PA8A LINE L1 6045 6103 -28 291 329 252 18 chr18 23201070 23201869 -62787065 + L2 LINE L2 1890 2875 -439 223 309 0 0 chr18 23202213 23202268 -62786666 - L2 LINE L2 -41 3231 3177 306 0 0 0 chr18 23202354 23202388 -62786546 + (CA)n Simple_repeat Simple_repeat 2 35 0 359 289 93 108 chr18 23203955 23204624 -62784310 + L1M2 LINE L1 446 1104 -5745 264 59 0 0 chr18 23204739 23204773 -62784161 + (T)n Simple_repeat Simple_repeat 1 34 0 2078 125 0 7 chr18 23205414 23205710 -62783224 - AluSx SINE Alu -18 294 1 182 229 0 21 chr18 23205942 23205990 -62782944 - MIR SINE MIR -31 231 185 230 222 56 0 chr18 23206119 23206173 -62782761 - L2 LINE L2 0 3313 3257 2296 110 0 0 chr18 23206456 23206755 -62782179 + AluSx SINE Alu 3 301 -11 701 305 128 34 chr18 23206870 23207128 -62781806 - L2 LINE L2 -958 2356 2124 2112 125 0 10 chr18 23207128 23207432 -62781502 + AluSx SINE Alu 1 301 -11 701 305 128 34 chr18 23207432 23207619 -62781315 - L2 LINE L2 -1190 2124 1869 2220 105 7 3 chr18 23208231 23208527 -62780407 - AluSx SINE Alu -12 300 4 2035 88 16 46 chr18 23208937 23209243 -62779691 - AluSq SINE Alu -4 309 13 229 313 168 34 chr18 23209926 23210134 -62778800 - MIR SINE MIR -7 255 20 223 259 0 19 chr18 23210665 23210719 -62778215 - MIR SINE MIR -61 147 95 398 252 0 29 chr18 23210895 23210998 -62777936 - MIR SINE MIR -1 261 162 1674 155 0 47 chr18 23211645 23211941 -62776993 + AluJo SINE Alu 11 292 -20 183 42 0 0 chr18 23212333 23212357 -62776577 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1355 135 190 13 chr18 23212360 23212459 -62776475 - AluSg1 SINE Alu -30 279 199 2150 111 10 0 chr18 23212459 23212747 -62776187 - AluSx SINE Alu -21 291 1 1355 135 190 13 chr18 23212747 23212884 -62776050 - AluSg1 SINE Alu -110 199 1 2399 95 3 0 chr18 23213581 23213886 -62775048 - AluSg SINE Alu -4 306 1 2256 114 0 10 chr18 23213886 23214193 -62774741 - AluSx SINE Alu -7 305 1 2142 126 3 62 chr18 23214303 23214661 -62774273 + MER1B DNA MER1_type 1 337 0 198 0 0 0 chr18 23215054 23215076 -62773858 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 234 204 0 0 chr18 23215280 23215329 -62773605 + L1MA5A LINE L1 6004 6052 -245 773 207 0 0 chr18 23215329 23215464 -62773470 + AluJo SINE Alu 1 135 -177 1765 147 0 66 chr18 23215464 23215797 -62773137 + AluSx SINE Alu 1 311 -1 941 236 149 47 chr18 23215861 23216398 -62772536 + L1M4 LINE L1 2169 2760 -3386 250 354 0 0 chr18 23216882 23216995 -62771939 - AluSp SINE Alu -70 233 121 23 0 0 0 chr18 23216995 23217018 -62771916 + AT_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr18 23217133 23217159 -62771775 + (T)n Simple_repeat Simple_repeat 1 26 0 1325 98 0 0 chr18 23217381 23217554 -62771380 - AluSg/x SINE Alu -18 291 119 4385 2 0 0 chr18 23217557 23218066 -62770868 + L1HS LINE L1 5647 6155 0 546 241 0 0 chr18 23218171 23218345 -62770589 + AluSg/x SINE Alu 127 300 -12 246 32 0 0 chr18 23218376 23218407 -62770527 + (CA)n Simple_repeat Simple_repeat 2 32 0 213 121 0 0 chr18 23219009 23219042 -62769892 + (TA)n Simple_repeat Simple_repeat 2 34 0 270 211 18 18 chr18 23219914 23219971 -62768963 + L2 LINE L2 2997 3053 -219 785 191 57 0 chr18 23219988 23220129 -62768805 + FRAM SINE Alu 4 152 -24 2283 106 0 0 chr18 23220938 23221239 -62767695 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr18 23221633 23221654 -62767280 + AT_rich Low_complexity Low_complexity 1 21 0 345 356 26 0 chr18 23221876 23221991 -62766943 - L2 LINE L2 -18 3254 3137 2215 92 3 0 chr18 23222554 23222882 -62766052 + AluSx SINE Alu 1 329 0 229 314 95 86 chr18 23223309 23223549 -62765385 - L2 LINE L2 -421 2893 2648 2406 81 10 0 chr18 23223549 23223845 -62765089 + AluSx SINE Alu 1 299 -13 229 314 95 86 chr18 23223845 23223929 -62765005 - L2 LINE L2 -666 2648 2566 458 157 0 0 chr18 23223983 23224053 -62764881 + 5S rRNA rRNA 18 87 -34 2218 101 10 0 chr18 23224311 23224608 -62764326 - AluSx SINE Alu -12 300 1 322 333 19 9 chr18 23224759 23224864 -62764070 - MIR SINE MIR -116 146 41 258 56 0 0 chr18 23224865 23224901 -62764033 + (TG)n Simple_repeat Simple_repeat 1 36 0 2091 124 0 0 chr18 23224906 23225188 -62763746 - AluSx SINE Alu -30 282 1 2777 99 0 0 chr18 23227552 23227916 -62761018 + THE1B LTR MaLR 1 364 0 825 179 106 103 chr18 23228356 23228714 -62760220 + L1ME2 LINE L1 5802 6160 -4 1719 153 3 84 chr18 23228863 23229184 -62759750 + AluJb SINE Alu 1 295 -17 229 285 116 35 chr18 23229414 23229586 -62759348 - L1MC4a LINE L1 -1807 6001 5816 1531 127 23 31 chr18 23229668 23229928 -62759006 - AluSx SINE Alu -8 304 47 1611 117 0 0 chr18 23230006 23230220 -62758714 - AluJb SINE Alu -14 298 85 233 195 0 0 chr18 23230220 23230261 -62758673 - AluJo/FLAM SINE Alu -52 250 210 22 0 0 0 chr18 23230261 23230283 -62758651 + AT_rich Low_complexity Low_complexity 1 22 0 827 136 8 0 chr18 23230283 23230408 -62758526 - FLAM_C SINE Alu -7 126 1 895 105 42 167 chr18 23230522 23230661 -62758273 + MER3 DNA MER1_type 1 99 -110 2065 101 10 27 chr18 23230661 23230959 -62757975 - AluSx SINE Alu -19 293 1 895 105 42 167 chr18 23230959 23231058 -62757876 + MER3 DNA MER1_type 99 209 0 468 218 0 0 chr18 23231245 23231332 -62757602 - FLAM_A SINE Alu -16 126 40 2303 116 0 0 chr18 23231653 23231964 -62756970 + AluSx SINE Alu 1 311 -1 2305 80 0 46 chr18 23232195 23232520 -62756414 + AluY SINE Alu 2 311 0 2000 112 35 14 chr18 23234742 23235048 -62753886 + AluSg SINE Alu 1 310 0 1953 108 0 0 chr18 23235049 23235309 -62753625 + AluSg SINE Alu 1 260 -50 429 304 9 0 chr18 23235441 23235553 -62753381 + MIR SINE MIR 34 146 -62 2096 123 3 22 chr18 23235708 23236024 -62752910 + AluSx SINE Alu 1 310 -2 1000 24 103 8 chr18 23236725 23236851 -62752083 + MER85 DNA T2_type 2 139 0 1075 293 76 35 chr18 23236880 23237443 -62751491 + L1ME LINE L1 30 615 -5455 183 82 20 41 chr18 23237449 23237498 -62751436 + (TTA)n Simple_repeat Simple_repeat 3 50 0 * 433 106 36 52 chr18 23237495 23237835 -62751099 + (TATAA)n Simple_repeat Simple_repeat 1 334 0 2055 145 3 3 chr18 23237867 23238178 -62750756 + AluSx SINE Alu 1 311 -1 1153 228 147 50 chr18 23238242 23238785 -62750149 + L1ME LINE L1 2103 2698 -3382 2003 132 24 0 chr18 23240053 23240349 -62748585 + AluSg SINE Alu 2 304 -6 24 53 0 0 chr18 23240585 23240623 -62748311 + AT_rich Low_complexity Low_complexity 1 38 0 1694 186 68 22 chr18 23240915 23241281 -62747653 - MLT1D LTR MaLR -25 480 98 373 179 0 41 chr18 23241751 23241986 -62746948 + AluJo SINE Alu 1 293 -8 27 0 0 0 chr18 23242002 23242029 -62746905 + AT_rich Low_complexity Low_complexity 1 27 0 596 258 182 61 chr18 23242074 23242603 -62746331 - L2 LINE L2 -22 3291 2699 2434 87 3 3 chr18 23242634 23242946 -62745988 + AluSq SINE Alu 1 312 -1 554 144 48 10 chr18 23243042 23243146 -62745788 - L1MB8 LINE L1 0 6178 6071 236 213 0 21 chr18 23243201 23243248 -62745686 + Tigger5 DNA MER2_type 1 46 -2277 1341 184 40 4 chr18 23243248 23243476 -62745458 - AluJb SINE Alu -76 236 1 339 193 0 0 chr18 23243483 23243540 -62745394 + Tigger5 DNA MER2_type 2263 2319 -4 424 329 13 13 chr18 23243815 23243964 -62744970 - L2 LINE L2 -609 2705 2557 2437 64 0 38 chr18 23243994 23244308 -62744626 - AluY SINE Alu -9 302 1 205 176 20 39 chr18 23244676 23244727 -62744207 + L2 LINE L2 3263 3312 -1 256 224 118 24 chr18 23244859 23244944 -62743990 + L1M4 LINE L1 4519 4611 -1535 870 154 8 0 chr18 23245158 23245288 -62743646 + AluSx SINE Alu 1 131 -182 206 42 0 0 chr18 23245474 23245498 -62743436 + (A)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr18 23245614 23245636 -62743298 + AT_rich Low_complexity Low_complexity 1 22 0 1199 154 0 11 chr18 23245636 23245818 -62743116 + AluSx SINE Alu 121 300 -12 2133 102 0 3 chr18 23245820 23246129 -62742805 + AluSc SINE Alu 1 308 0 1093 283 97 11 chr18 23246256 23246798 -62742136 + L2 LINE L2 2722 3313 0 831 165 31 0 chr18 23246939 23247066 -62741868 - FLAM_C SINE Alu -2 131 1 2162 115 10 3 chr18 23247601 23247906 -62741028 - AluSx SINE Alu 0 312 6 813 265 11 0 chr18 23247914 23248099 -62740835 + MIR SINE MIR 12 198 -64 359 210 0 0 chr18 23248100 23248162 -62740772 - Tigger5 DNA MER2_type -1 2322 2261 * 440 200 27 0 chr18 23248150 23248225 -62740709 - Tigger5 DNA MER2_type -2245 78 2 1990 153 0 6 chr18 23248590 23248929 -62740005 + AluSx SINE Alu 1 312 0 312 304 169 27 chr18 23249002 23249186 -62739748 + L1MEd LINE L1 345 554 -5565 205 83 0 28 chr18 23249255 23249291 -62739643 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 601 244 122 77 chr18 23249298 23249855 -62739079 + L1MEd LINE L1 671 1252 -4867 1948 78 13 107 chr18 23249982 23250291 -62738643 + AluSq SINE Alu 21 300 -13 194 105 26 0 chr18 23250716 23250754 -62738180 + GA-rich Low_complexity Low_complexity 2 40 0 212 371 93 0 chr18 23250756 23250853 -62738081 - L2 LINE L2 -31 3241 3136 2223 104 7 3 chr18 23251017 23251325 -62737609 + AluSx SINE Alu 3 311 -1 448 247 193 48 chr18 23251346 23251719 -62737215 - LTR33 LTR ERVL -49 472 46 616 259 189 12 chr18 23251731 23252168 -62736766 - L2 LINE L2 -254 3059 2556 13949 196 44 41 chr18 23252283 23252412 -62736522 - L1PB2 LINE L1 -1 6150 6023 2342 73 0 32 chr18 23252412 23252725 -62736209 - AluSx SINE Alu -9 303 1 13949 196 44 41 chr18 23252725 23256072 -62732862 - L1PB2 LINE L1 -128 6023 2685 4643 74 0 25 chr18 23256072 23256565 -62732369 + MER41A LTR ERV1 1 480 -74 2097 81 4 0 chr18 23256565 23256836 -62732098 - AluY SINE Alu -39 272 1 4643 74 0 25 chr18 23256836 23256910 -62732024 + MER41A LTR ERV1 480 554 0 13949 196 44 41 chr18 23256910 23257828 -62731106 - L1PB2 LINE L1 -3466 2685 1772 531 108 72 0 chr18 23257823 23257906 -62731028 + L1PBa LINE L1 2328 2416 -4447 * 349 212 226 0 chr18 23258030 23258167 -62730767 + L1MB7 LINE L1 5571 5738 -383 200 208 42 97 chr18 23258670 23258742 -62730192 - L3 LINE CR1 -7 1570 1503 680 236 0 67 chr18 23259030 23259208 -62729726 - AluSg/x SINE Alu -33 279 114 496 217 20 40 chr18 23259705 23259857 -62729077 + L1MB7 LINE L1 6034 6182 -2 2358 72 0 19 chr18 23260138 23260445 -62728489 + AluY SINE Alu 1 301 -10 797 163 46 13 chr18 23260555 23260708 -62728226 - THE1C LTR MaLR -217 158 1 284 192 50 8 chr18 23260745 23260865 -62728069 + (TA)n Simple_repeat Simple_repeat 2 126 0 1938 97 14 4 chr18 23260882 23261200 -62727734 - AluSg SINE Alu 0 321 1 2096 133 0 10 chr18 23261200 23261507 -62727427 - AluSx SINE Alu -7 305 1 948 143 7 7 chr18 23261617 23261764 -62727170 + MER1B DNA MER1_type 1 147 -150 831 165 31 0 chr18 23262102 23262229 -62726705 - FLAM_C SINE Alu -2 131 1 2121 116 33 0 chr18 23263274 23263575 -62725359 - AluSx SINE Alu -1 311 1 2107 133 3 0 chr18 23263592 23263886 -62725048 - AluSx SINE Alu -17 295 1 1970 108 19 77 chr18 23264212 23264537 -62724397 - AluY SINE Alu -5 306 1 324 252 37 19 chr18 23264582 23264689 -62724245 - L1M4 LINE L1 -1249 4897 4789 333 322 17 8 chr18 23264697 23264815 -62724119 - L2 LINE L2 -220 3052 2934 1689 163 35 10 chr18 23264869 23265182 -62723752 + MER33 DNA MER1_type 1 321 -3 862 209 6 0 chr18 23265276 23265434 -62723500 + FRAM SINE Alu 1 157 -19 2320 95 7 0 chr18 23265450 23265745 -62723189 + AluSx SINE Alu 6 302 -10 30 59 0 0 chr18 23265814 23265865 -62723069 + AT_rich Low_complexity Low_complexity 1 51 0 21 71 0 0 chr18 23266081 23266123 -62722811 + AT_rich Low_complexity Low_complexity 1 42 0 1287 72 0 3 chr18 23266663 23266900 -62722034 - AluSq SINE Alu -14 299 2 2341 89 3 0 chr18 23266978 23267269 -62721665 - AluSc SINE Alu -17 292 1 236 234 149 56 chr18 23267328 23267435 -62721499 - L2 LINE L2 -36 3277 3161 2791 7 0 0 chr18 23267575 23267872 -62721062 - AluY SINE Alu -13 298 2 1500 215 13 29 chr18 23267959 23268271 -62720663 - MER82 DNA MER2_type 0 653 347 2267 106 0 31 chr18 23268271 23268593 -62720341 + AluSx SINE Alu 1 312 0 2556 60 0 0 chr18 23268747 23269048 -62719886 - AluY SINE Alu -10 301 1 810 187 0 0 chr18 23269068 23269207 -62719727 + FRAM SINE Alu 30 168 -8 224 280 75 63 chr18 23269209 23269622 -62719312 - L2 LINE L2 -1069 2245 1776 1861 158 11 0 chr18 23270472 23270756 -62718178 + AluJo SINE Alu 1 287 -25 35 88 0 0 chr18 23270757 23270848 -62718086 + AT_rich Low_complexity Low_complexity 1 91 0 1718 126 12 12 chr18 23270894 23271149 -62717785 - AluJb SINE Alu -57 255 1 787 167 8 16 chr18 23271382 23271508 -62717426 - FLAM_C SINE Alu -8 125 1 218 336 67 25 chr18 23271766 23271885 -62717049 - L2 LINE L2 -24 3289 3166 385 267 82 22 chr18 23271997 23272132 -62716802 + L2 LINE L2 3161 3303 -10 183 80 0 0 chr18 23272134 23272159 -62716775 + (TGGA)n Simple_repeat Simple_repeat 2 26 0 2312 98 0 13 chr18 23272311 23272616 -62716318 + AluSq SINE Alu 2 302 -11 1964 140 0 3 chr18 23273453 23273764 -62715170 + AluSx SINE Alu 1 310 0 1208 152 143 6 chr18 23273960 23274209 -62714725 + L1MB3 LINE L1 5542 5798 -356 2178 112 7 13 chr18 23274209 23274514 -62714420 + AluSx SINE Alu 5 307 -5 1208 152 143 6 chr18 23274514 23274547 -62714387 + L1MB3 LINE L1 5798 5825 -329 2015 119 0 7 chr18 23274609 23274895 -62714039 + AluSx SINE Alu 1 284 -28 1101 153 0 0 chr18 23274902 23275079 -62713855 + L1MB3 LINE L1 5818 5994 -189 1336 128 0 0 chr18 23275079 23275258 -62713676 - AluJb SINE Alu -133 179 1 2246 90 14 0 chr18 23275271 23275561 -62713373 - AluSp SINE Alu -19 294 1 1861 164 3 0 chr18 23275805 23276092 -62712842 - AluJo SINE Alu -24 288 1 206 319 28 0 chr18 23276263 23276335 -62712599 + (CATATA)n Simple_repeat Simple_repeat 1 74 0 242 271 84 28 chr18 23276406 23276513 -62712421 - MIR3 SINE MIR -42 166 54 2441 74 0 3 chr18 23276545 23276854 -62712080 - AluY SINE Alu -2 309 2 2298 98 0 3 chr18 23278718 23279024 -62709910 - AluSq SINE Alu -8 305 1 2276 86 0 16 chr18 23279051 23279354 -62709580 + AluSg SINE Alu 12 309 -1 227 242 242 0 chr18 23279682 23279781 -62709153 + L2 LINE L2 2226 2348 -966 1941 189 33 35 chr18 23280031 23280428 -62708506 - MSTD LTR MaLR 0 396 1 190 303 56 34 chr18 23280621 23280710 -62708224 + L2 LINE L2 3163 3253 -19 795 165 0 8 chr18 23280804 23280925 -62708009 - AluJb SINE Alu -11 301 182 273 106 0 21 chr18 23280926 23280973 -62707961 - AluSp SINE Alu -172 131 86 2402 80 0 13 chr18 23281215 23281526 -62707408 - AluY SINE Alu -4 307 1 856 224 50 55 chr18 23282081 23282300 -62706634 - AluJo SINE Alu -30 282 65 1054 119 119 16 chr18 23282321 23282515 -62706419 - Tigger3(Golem) DNA MER2_type -57 2972 69 1253 172 31 18 chr18 23282613 23282840 -62706094 - AluJo SINE Alu -78 234 5 240 320 222 51 chr18 23283671 23284140 -62704794 + L2 LINE L2 2331 2879 -435 531 244 192 0 chr18 23284831 23284980 -62703954 + MER5A DNA MER1_type 4 185 -4 861 303 89 39 chr18 23284983 23285242 -62703692 + LTR16B LTR ERVL 1 292 -172 1832 152 13 7 chr18 23285242 23285544 -62703390 - AluJo SINE Alu -1 311 8 861 303 89 39 chr18 23285544 23285723 -62703211 + LTR16B LTR ERVL 292 461 -3 1426 192 176 3 chr18 23285770 23286088 -62702846 + MER93b LTR ERV1 1 373 0 2235 92 31 0 chr18 23286548 23286841 -62702093 + AluSx SINE Alu 1 302 -10 1939 131 0 4 chr18 23287105 23287379 -62701555 + AluJb SINE Alu 20 292 -20 219 36 0 0 chr18 23287823 23287851 -62701083 + (TG)n Simple_repeat Simple_repeat 2 29 0 1859 143 7 0 chr18 23287852 23288125 -62700809 - AluSx SINE Alu -37 275 1 2049 145 10 0 chr18 23288125 23288428 -62700506 - AluSx SINE Alu -6 306 1 965 199 68 14 chr18 23288539 23288828 -62700106 - LTR48B LTR ERV1 0 644 386 1856 136 18 3 chr18 23288878 23289164 -62699770 + AluSg SINE Alu 5 294 -16 254 194 16 0 chr18 23289164 23289226 -62699708 + (TA)n Simple_repeat Simple_repeat 1 63 0 327 299 0 0 chr18 23289226 23289313 -62699621 + L1MC4 LINE L1 6614 6700 -1342 616 294 184 29 chr18 23289546 23290035 -62698899 + L2 LINE L2 1323 1887 -1427 1710 159 25 14 chr18 23290037 23290313 -62698621 + AluJb SINE Alu 2 280 -32 463 309 69 86 chr18 23290637 23290766 -62698168 + L2 LINE L2 2621 2751 -521 1041 128 11 39 chr18 23290766 23290946 -62697988 - FAM SINE Alu 0 175 1 463 309 69 86 chr18 23290946 23291211 -62697723 + L2 LINE L2 2751 3008 -264 2160 88 11 0 chr18 23291211 23291494 -62697440 + AluSg SINE Alu 3 288 -22 463 309 69 86 chr18 23291494 23291754 -62697180 + L2 LINE L2 3008 3271 -1 214 291 73 36 chr18 23291810 23291920 -62697014 + MIR SINE MIR 2 115 -147 244 259 0 0 chr18 23291924 23291978 -62696956 - L2 LINE L2 -26 3246 3193 579 337 42 67 chr18 23292043 23292660 -62696274 - L2 LINE L2 -337 2977 2376 221 386 33 0 chr18 23292671 23292824 -62696110 - L2 LINE L2 -606 2708 2551 1422 128 59 83 chr18 23292835 23293038 -62695896 + MER49 LTR ERV1 4 199 -724 1905 142 19 19 chr18 23293038 23293349 -62695585 + AluJb SINE Alu 1 311 -1 1422 128 59 83 chr18 23293349 23293434 -62695500 + MER49 LTR ERV1 199 285 -638 1528 209 9 32 chr18 23293441 23293781 -62695153 + MER4D LTR ERV1 562 893 -10 2522 60 0 0 chr18 23294234 23294535 -62694399 - AluY SINE Alu -6 305 5 212 382 73 0 chr18 23294535 23294645 -62694289 + L2 LINE L2 3149 3266 -6 22 0 0 0 chr18 23294726 23294748 -62694186 + AT_rich Low_complexity Low_complexity 1 22 0 2026 143 3 3 chr18 23294752 23295046 -62693888 + AluSx SINE Alu 1 294 -18 1398 154 77 8 chr18 23295049 23295195 -62693739 - AluJo SINE Alu -30 282 148 189 0 0 0 chr18 23295195 23295216 -62693718 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1398 154 77 8 chr18 23295216 23295329 -62693605 - AluJo SINE Alu -164 148 5 2227 124 0 0 chr18 23295787 23296085 -62692849 - AluSx SINE Alu -14 298 1 2177 139 35 44 chr18 23296108 23296475 -62692459 + THE1B LTR MaLR 1 364 0 1141 275 65 48 chr18 23296546 23297041 -62691893 + LTR33 LTR ERVL 19 521 0 1694 144 6 69 chr18 23297377 23297696 -62691238 + AluSx SINE Alu 1 299 -13 317 176 0 0 chr18 23297696 23297747 -62691187 - MLT2D LTR ERVL -363 51 1 2414 194 37 16 chr18 23297747 23298292 -62690642 - L1MC4a LINE L1 -562 7246 6691 858 176 8 0 chr18 23298920 23299045 -62689889 - FLAM_A SINE Alu -7 126 1 1678 138 60 11 chr18 23299057 23299349 -62689585 - AluSx SINE Alu 0 305 1 21 0 0 0 chr18 23299427 23299448 -62689486 + AT_rich Low_complexity Low_complexity 1 21 0 2348 88 7 3 chr18 23300076 23300381 -62688553 - AluSx SINE Alu -6 306 1 320 71 0 0 chr18 23300619 23300661 -62688273 - Charlie1 DNA MER1_type -12 2749 2708 27 0 0 0 chr18 23300812 23300839 -62688095 + AT_rich Low_complexity Low_complexity 1 27 0 641 183 22 51 chr18 23301268 23301405 -62687529 - FLAM_C SINE Alu 0 133 1 182 325 103 26 chr18 23302187 23302304 -62686630 - MIR3 SINE MIR 0 208 83 852 127 204 6 chr18 23302619 23302776 -62686158 - MER53 DNA DNA -1 188 1 229 246 69 92 chr18 23302787 23302917 -62686017 + L2 LINE L2 2935 3061 -211 479 251 246 8 chr18 23303485 23303871 -62685063 - L1ME4a LINE L1 -2 6119 5642 306 203 108 0 chr18 23303928 23304002 -62684932 - L1ME4a LINE L1 -476 5645 5564 1407 151 90 29 chr18 23304004 23304282 -62684652 - AluJb SINE Alu -4 308 14 199 143 48 0 chr18 23304779 23304821 -62684113 - L2 LINE L2 -1 3312 3269 197 200 0 0 chr18 23305045 23305085 -62683849 + L2 LINE L2 3274 3313 0 966 268 66 29 chr18 23306354 23306836 -62682098 - HAL1 LINE L1 -1189 1318 819 1896 125 0 18 chr18 23307007 23307286 -62681648 + AluJb SINE Alu 1 274 -38 243 373 51 17 chr18 23307974 23308092 -62680842 + MIR3 SINE MIR 7 128 -80 201 265 205 24 chr18 23308128 23308211 -62680723 - MIR3 SINE MIR -3 205 108 203 203 17 0 chr18 23308575 23308634 -62680300 + (TA)n Simple_repeat Simple_repeat 2 61 0 21 71 0 0 chr18 23310187 23310229 -62678705 + AT_rich Low_complexity Low_complexity 1 42 0 35 71 0 0 chr18 23310317 23310387 -62678547 + AT_rich Low_complexity Low_complexity 1 70 0 1290 174 128 26 chr18 23310730 23310995 -62677939 - AluJo SINE Alu -20 292 1 908 281 52 35 chr18 23311238 23311718 -62677216 - L1ME4a LINE L1 -84 6037 5550 2090 110 7 13 chr18 23311828 23312127 -62676807 + AluSq SINE Alu 1 297 -16 423 237 145 7 chr18 23312128 23312280 -62676654 - L1MD2 LINE L1 -12 6347 6175 * 1080 206 49 38 chr18 23312251 23312595 -62676339 - L1ME4a LINE L1 -877 5269 4922 1708 142 0 8 chr18 23312623 23312876 -62676058 - AluJb SINE Alu -20 292 42 1441 146 0 0 chr18 23312877 23313090 -62675844 - AluSx SINE Alu -99 213 1 386 302 77 87 chr18 23313704 23314144 -62674790 - MER21-int LTR ERV1 -215 3976 3540 2220 119 3 0 chr18 23314144 23314438 -62674496 - AluSg SINE Alu -14 296 2 386 302 77 87 chr18 23314438 23314527 -62674407 - MER21-int LTR ERV1 -651 3540 3452 2175 120 0 19 chr18 23314890 23315198 -62673736 + AluSx SINE Alu 1 302 -10 1008 119 90 31 chr18 23315544 23315833 -62673101 + THE1C LTR MaLR 1 375 0 307 250 70 10 chr18 23315995 23316095 -62672839 + L1ME3A LINE L1 5908 6013 -157 260 279 15 0 chr18 23316097 23316165 -62672769 + L1ME3A LINE L1 6061 6129 -41 5124 243 71 28 chr18 23316264 23317942 -62670992 - L1MEc LINE L1 -4601 1795 46 1897 152 0 3 chr18 23317980 23318293 -62670641 + AluSx SINE Alu 1 312 0 186 301 14 14 chr18 23319602 23319675 -62669259 + MIR SINE MIR 184 256 -6 21 0 0 0 chr18 23319678 23319699 -62669235 + AT_rich Low_complexity Low_complexity 1 21 0 207 324 14 0 chr18 23320571 23320642 -62668292 - L2 LINE L2 -1042 2272 2201 1431 205 48 61 chr18 23322034 23322429 -62666505 - MLT1B LTR MaLR 0 390 1 927 250 118 58 chr18 23322621 23322920 -62666014 - L2 LINE L2 0 3313 2975 2210 123 7 3 chr18 23322920 23323229 -62665705 + AluSx SINE Alu 3 312 0 927 250 118 58 chr18 23323229 23323397 -62665537 - L2 LINE L2 -338 2975 2818 22 0 0 0 chr18 23324009 23324031 -62664903 + AT_rich Low_complexity Low_complexity 1 22 0 1929 137 0 36 chr18 23324031 23324337 -62664597 - AluJb SINE Alu -17 295 1 584 362 31 4 chr18 23324910 23325164 -62663770 + MIR SINE MIR 2 262 0 2286 119 0 0 chr18 23325446 23325758 -62663176 - AluSx SINE Alu 0 312 1 847 176 0 0 chr18 23325979 23326115 -62662819 + MER2 DNA MER2_type 1 136 -209 889 131 0 23 chr18 23326126 23326256 -62662678 - AluSq/x SINE Alu -186 127 1 1240 130 39 61 chr18 23326256 23326486 -62662448 + MER2 DNA MER2_type 121 345 0 266 211 18 0 chr18 23327592 23327649 -62661285 - L2 LINE L2 -24 3289 3232 1180 170 0 14 chr18 23327667 23327879 -62661055 - L1PA15 LINE L1 -2 6163 5955 641 276 57 63 chr18 23328039 23328214 -62660720 - MLT1J1 LTR MaLR 0 446 271 986 254 4 22 chr18 23328214 23328404 -62660530 - MER58A DNA MER1_type -2196 224 37 2225 123 0 0 chr18 23328404 23328712 -62660222 - AluSx SINE Alu -4 308 1 986 254 4 22 chr18 23328712 23328749 -62660185 - MER58A DNA MER1_type -2383 37 1 641 276 57 63 chr18 23328749 23329015 -62659919 - MLT1J1 LTR MaLR -175 271 8 409 196 0 75 chr18 23329122 23329229 -62659705 - MER112 DNA MER1_type -9 251 153 2237 104 0 19 chr18 23329230 23329546 -62659388 + AluSx SINE Alu 1 310 -2 340 237 199 74 chr18 23330969 23331306 -62657628 + L1M2 LINE L1 876 1254 -5595 1476 123 84 53 chr18 23331800 23332084 -62656850 - AluJb SINE Alu -9 303 11 1980 134 53 0 chr18 23332542 23332825 -62656109 - AluSq SINE Alu -15 298 1 1126 126 120 11 chr18 23333223 23333406 -62655528 + MER3 DNA MER1_type 7 209 0 249 295 0 0 chr18 23334497 23334558 -62654376 - LTR67 LTR ERVL -14 543 483 2028 147 6 10 chr18 23334828 23335141 -62653793 - AluJb SINE Alu 0 312 1 1207 142 46 0 chr18 23335172 23335391 -62653543 + AluJb SINE Alu 87 312 0 305 301 34 74 chr18 23336396 23336572 -62652362 - L3 LINE CR1 -5 1572 1404 1534 169 37 37 chr18 23336595 23336891 -62652043 + AluJb SINE Alu 1 296 -16 2402 80 0 13 chr18 23337430 23337741 -62651193 + AluY SINE Alu 1 307 -4 273 106 0 21 chr18 23337983 23338030 -62650904 + AluSp SINE Alu 86 131 -172 810 163 0 8 chr18 23338031 23338154 -62650780 + AluJb SINE Alu 182 303 -9 213 260 65 39 chr18 23338263 23338340 -62650594 - L2 LINE L2 -36 3277 3199 1812 189 33 35 chr18 23338529 23338926 -62650008 + MSTD LTR MaLR 1 396 0 203 280 186 17 chr18 23339176 23339294 -62649640 - L2 LINE L2 -966 2348 2211 454 253 73 94 chr18 23339294 23339539 -62649395 + L1ME LINE L1 5445 5684 -437 243 0 0 0 chr18 23339765 23339792 -62649142 + (A)n Simple_repeat Simple_repeat 1 27 0 1676 186 84 3 chr18 23339792 23340126 -62648808 - MER82 DNA MER2_type -292 361 1 1678 172 0 4 chr18 23342304 23342566 -62646368 - AluJo SINE Alu -46 266 6 1033 222 22 9 chr18 23342593 23342823 -62646111 - MIR SINE MIR -22 240 8 193 275 29 29 chr18 23343113 23343182 -62645752 - MIR SINE MIR -10 252 184 221 271 42 21 chr18 23343515 23343611 -62645323 + L2 LINE L2 3208 3305 -8 393 221 126 39 chr18 23343844 23343971 -62644963 + L1ME3A LINE L1 6023 6160 -10 2620 224 47 64 chr18 23344201 23344605 -62644329 + L1MC4 LINE L1 7158 7568 -474 1679 162 0 34 chr18 23344605 23344736 -62644198 + AluJo SINE Alu 14 148 -164 673 11 0 23 chr18 23344736 23344824 -62644110 + (CATAA)n Simple_repeat Simple_repeat 5 90 0 1679 162 0 34 chr18 23344824 23344988 -62643946 + AluJo SINE Alu 148 299 -13 2620 224 47 64 chr18 23344988 23345463 -62643471 + L1MC4 LINE L1 7568 8023 -19 2280 98 3 28 chr18 23345463 23345781 -62643153 - AluY SINE Alu -1 310 1 2620 224 47 64 chr18 23345781 23345801 -62643133 + L1MC4 LINE L1 8023 8042 0 249 291 60 22 chr18 23345977 23346111 -62642823 - L3 LINE CR1 -271 1306 1168 2149 129 0 0 chr18 23346111 23346413 -62642521 - AluSg SINE Alu -8 302 1 2069 97 8 0 chr18 23346415 23346673 -62642261 - AluSq SINE Alu -53 260 1 297 255 20 39 chr18 23346914 23347016 -62641918 - L3 LINE CR1 -717 860 761 23 33 0 0 chr18 23347367 23347397 -62641537 + AT_rich Low_complexity Low_complexity 1 30 0 892 118 0 16 chr18 23347794 23347921 -62641013 + AluJo/FLAM SINE Alu 3 127 -185 2054 106 11 4 chr18 23347924 23348198 -62640736 + AluSq SINE Alu 1 276 -37 1577 185 0 38 chr18 23348421 23348708 -62640226 - AluJb SINE Alu -36 276 1 510 129 106 15 chr18 23350439 23350571 -62638363 + L1M4 LINE L1 5188 5331 -815 4054 213 34 8 chr18 23350573 23351592 -62637342 + L1M4 LINE L1 4342 5387 -759 1858 130 0 11 chr18 23351593 23351855 -62637079 + AluSx SINE Alu 25 283 -29 1917 142 7 29 chr18 23352207 23352516 -62636418 - AluJb SINE Alu -10 302 1 21 0 0 0 chr18 23352526 23352547 -62636387 + AT_rich Low_complexity Low_complexity 1 21 0 2241 113 3 0 chr18 23352803 23353095 -62635839 + AluSx SINE Alu 1 293 -19 23 0 0 0 chr18 23353117 23353140 -62635794 + AT_rich Low_complexity Low_complexity 1 23 0 254 262 301 6 chr18 23353148 23353331 -62635603 + L2 LINE L2 3031 3267 -46 2503 156 28 34 chr18 23353691 23354133 -62634801 - L1MB7 LINE L1 0 6184 5744 1706 140 7 55 chr18 23354133 23354440 -62634494 - AluJo SINE Alu -10 302 11 2503 156 28 34 chr18 23354440 23354491 -62634443 - L1MB7 LINE L1 -440 5744 5694 2144 99 0 30 chr18 23354583 23354885 -62634049 - AluSx SINE Alu -19 293 1 2332 108 0 0 chr18 23354962 23355267 -62633667 + AluSg SINE Alu 1 305 -5 595 174 25 37 chr18 23355698 23355859 -62633075 - MIR SINE MIR 0 262 104 2283 112 7 3 chr18 23355891 23356194 -62632740 + AluSx SINE Alu 1 304 -8 784 248 75 44 chr18 23356245 23356286 -62632648 + HAL1 LINE L1 741 779 -1728 1749 190 3 0 chr18 23356286 23356581 -62632353 + AluJb SINE Alu 1 296 -16 784 248 75 44 chr18 23356581 23356926 -62632008 + HAL1 LINE L1 779 1139 -1368 1252 239 53 8 chr18 23356949 23357376 -62631558 + MLT1E3 LTR MaLR 139 621 -3 866 221 127 85 chr18 23357449 23357851 -62631083 + MLT1J LTR MaLR 64 482 -29 702 186 0 0 chr18 23357873 23357991 -62630943 - FLAM_C SINE Alu -24 119 2 2083 217 67 94 chr18 23358017 23358466 -62630468 + HAL1 LINE L1 1446 1906 -601 1774 181 3 13 chr18 23358466 23358781 -62630153 + AluSx SINE Alu 1 312 0 2083 217 67 94 chr18 23358781 23358923 -62630011 + HAL1 LINE L1 1906 2050 -457 2023 141 0 0 chr18 23358923 23359240 -62629694 - AluSq SINE Alu 0 317 1 2083 217 67 94 chr18 23359240 23359431 -62629503 + HAL1 LINE L1 2050 2245 -262 1934 140 20 0 chr18 23359431 23359724 -62629210 + AluJb SINE Alu 6 304 -8 2083 217 67 94 chr18 23359724 23359807 -62629127 + HAL1 LINE L1 2245 2286 -221 7856 21 1 0 chr18 23359807 23361478 -62627456 + L1PA4 LINE L1 4482 6152 -3 2083 217 67 94 chr18 23361478 23361598 -62627336 + HAL1 LINE L1 2286 2408 -99 731 262 44 47 chr18 23361639 23361937 -62626997 + L1MCc LINE L1 877 1173 -5250 304 271 68 55 chr18 23361942 23362178 -62626756 + L1MCc LINE L1 1577 1815 -5126 1010 299 61 38 chr18 23362216 23362635 -62626299 - HERV16 LTR ERVL -3429 1567 1133 2090 107 3 13 chr18 23362635 23362935 -62625999 + AluSg SINE Alu 14 310 0 1010 299 61 38 chr18 23362935 23363020 -62625914 - HERV16 LTR ERVL -3863 1133 1051 2278 118 0 3 chr18 23363103 23363416 -62625518 + AluSx SINE Alu 1 312 0 1314 111 0 0 chr18 23363422 23363593 -62625341 + AluSg/x SINE Alu 129 299 -13 2158 286 55 18 chr18 23363593 23364317 -62624617 + HERV16 LTR ERVL 1719 2469 -2527 557 166 210 56 chr18 23364495 23364754 -62624180 - MER4C LTR ERV1 0 465 158 1169 150 208 34 chr18 23364760 23365054 -62623880 - MER4A LTR ERV1 -319 345 1 989 295 40 43 chr18 23365054 23365400 -62623534 + HERV16 LTR ERVL 2735 3079 -1917 496 239 84 40 chr18 23365682 23365908 -62623026 + LTR16A LTR ERVL 202 437 -13 1069 128 44 28 chr18 23366154 23366334 -62622600 - AluJo SINE Alu -25 287 105 1843 163 0 3 chr18 23366335 23366617 -62622317 + AluJb SINE Alu 1 281 -31 225 108 0 0 chr18 23366619 23366656 -62622278 + (GA)n Simple_repeat Simple_repeat 2 38 0 661 193 0 0 chr18 23366673 23366787 -62622147 - FLAM_A SINE Alu -19 114 1 1384 187 83 14 chr18 23366817 23367106 -62621828 + AluJo SINE Alu 1 309 -3 2298 91 0 10 chr18 23367359 23367666 -62621268 - AluSq SINE Alu -4 309 6 3040 165 37 19 chr18 23367990 23368432 -62620502 + MER6A DNA MER2_type 1 458 -407 1733 194 10 0 chr18 23368432 23368726 -62620208 - AluJo SINE Alu -14 298 2 3040 165 37 19 chr18 23368726 23368877 -62620057 + MER6A DNA MER2_type 458 605 0 1785 121 73 17 chr18 23369131 23369420 -62619514 + AluSx SINE Alu 1 305 -7 1096 196 89 43 chr18 23370538 23370818 -62618116 - MLT1D LTR MaLR -5 500 208 1249 152 0 0 chr18 23370835 23371026 -62617908 - AluSg/x SINE Alu 0 310 120 1845 148 27 3 chr18 23371041 23371338 -62617596 - AluJb SINE Alu -8 304 1 846 189 0 92 chr18 23371338 23371544 -62617390 - MLT1D LTR MaLR -317 188 1 758 200 8 0 chr18 23371875 23372005 -62616929 + FLAM_A SINE Alu 1 131 -2 25 0 0 0 chr18 23372005 23372030 -62616904 + AT_rich Low_complexity Low_complexity 1 25 0 1848 143 33 16 chr18 23372140 23372447 -62616487 + AluJb SINE Alu 1 312 0 357 195 65 0 chr18 23372466 23372543 -62616391 + L1MB7 LINE L1 4843 4924 -1222 * 1368 197 55 36 chr18 23372533 23372703 -62616231 + L1MB7 LINE L1 5754 5919 -265 2274 112 3 0 chr18 23372703 23372999 -62615935 + AluSx SINE Alu 1 297 -15 1368 197 55 36 chr18 23372999 23373193 -62615741 + L1MB7 LINE L1 5919 6125 -59 3576 176 73 13 chr18 23373216 23373958 -62614976 - MER21B LTR ERV1 -21 842 1 222 297 16 0 chr18 23374027 23374091 -62614843 + L3 LINE CR1 1433 1497 -80 645 185 9 0 chr18 23374521 23374629 -62614305 + FLAM_A SINE Alu 6 114 -28 207 100 0 0 chr18 23374629 23374659 -62614275 + (TA)n Simple_repeat Simple_repeat 1 30 0 2044 137 3 13 chr18 23374760 23375066 -62613868 + AluJb SINE Alu 1 303 -9 268 241 25 6 chr18 23375170 23375278 -62613656 - HsTC2 DNA Tc2 -68 1830 2 707 119 249 7 chr18 23376252 23376531 -62612403 + MSTA LTR MaLR 1 427 -1 1743 181 3 0 chr18 23377340 23377638 -62611296 + AluJo SINE Alu 1 299 -13 1948 153 0 3 chr18 23378074 23378369 -62610565 - AluJb SINE Alu -18 294 1 2030 154 3 0 chr18 23379394 23379705 -62609229 + AluJo SINE Alu 1 312 0 2842 201 80 28 chr18 23380146 23380182 -62608752 + MER99 DNA DNA 37 70 -758 2172 114 3 10 chr18 23380182 23380481 -62608453 + AluSx SINE Alu 1 297 -15 2842 201 80 28 chr18 23380481 23381196 -62607738 + MER99 DNA DNA 70 827 -1 30 27 0 0 chr18 23381527 23381564 -62607370 + AT_rich Low_complexity Low_complexity 1 37 0 2092 155 0 0 chr18 23382433 23382743 -62606191 + AluJo SINE Alu 1 310 -2 277 358 86 30 chr18 23382917 23383185 -62605749 + L2 LINE L2 2942 3224 -48 1371 98 57 0 chr18 23383246 23383440 -62605494 - LTR12 LTR ERV1 -133 581 377 340 224 31 20 chr18 23383441 23383539 -62605395 - LTR30 LTR ERV1 -80 642 544 4551 141 58 76 chr18 23383539 23384552 -62604382 - pTR5 LTR ERV1 -413 2025 741 290 173 0 0 chr18 23385140 23385192 -62603742 + MIR SINE MIR 91 142 -66 533 220 37 173 chr18 23385588 23386037 -62602897 + L1ME4a LINE L1 5383 5771 -437 2202 227 207 29 chr18 23386135 23386638 -62602296 + HAL1 LINE L1 579 991 -1516 2190 130 0 0 chr18 23386638 23386937 -62601997 + AluSx SINE Alu 1 299 -13 2202 227 207 29 chr18 23386937 23387023 -62601911 + HAL1 LINE L1 991 1060 -1447 1677 120 15 27 chr18 23387023 23387282 -62601652 + AluSx SINE Alu 38 293 -19 2202 227 207 29 chr18 23387282 23387773 -62601161 + HAL1 LINE L1 1060 1853 -654 2322 119 0 0 chr18 23388070 23388381 -62600553 + AluSq SINE Alu 1 311 -2 2701 119 105 2 chr18 23388438 23388876 -62600058 - MER31A LTR ERV1 -2 483 1 2182 118 0 10 chr18 23389076 23389390 -62599544 + AluSx SINE Alu 1 311 -1 1124 139 28 74 chr18 23389457 23389519 -62599415 + AluJb SINE Alu 85 148 -164 2244 87 7 29 chr18 23389519 23389828 -62599106 + AluY SINE Alu 1 302 -9 1124 139 28 74 chr18 23389828 23389980 -62598954 + AluJb SINE Alu 148 289 -23 25 0 0 0 chr18 23389980 23390005 -62598929 + AT_rich Low_complexity Low_complexity 1 25 0 1730 141 18 18 chr18 23390025 23390308 -62598626 + AluJb SINE Alu 30 312 0 423 260 61 44 chr18 23390365 23390546 -62598388 + L1ME4a LINE L1 5934 6117 -4 2072 134 7 0 chr18 23390876 23391175 -62597759 + AluSc SINE Alu 1 301 -8 346 295 194 0 chr18 23391252 23391381 -62597553 - L2 LINE L2 -4 3268 3115 1958 139 20 0 chr18 23391692 23391986 -62596948 + AluSx SINE Alu 1 300 -12 2246 92 6 16 chr18 23391987 23392303 -62596631 + AluSq SINE Alu 1 313 0 2425 71 0 7 chr18 23392359 23392656 -62596278 - AluY SINE Alu -16 295 1 810 187 0 0 chr18 23392676 23392815 -62596119 + FRAM SINE Alu 30 168 -8 224 280 75 63 chr18 23392817 23393230 -62595704 - L2 LINE L2 -1069 2245 1776 1592 184 14 3 chr18 23394080 23394363 -62594571 + AluJo SINE Alu 1 286 -26 34 89 0 0 chr18 23394364 23394454 -62594480 + AT_rich Low_complexity Low_complexity 1 90 0 1718 126 12 12 chr18 23394500 23394755 -62594179 - AluJb SINE Alu -57 255 1 787 167 8 16 chr18 23394988 23395114 -62593820 - FLAM_C SINE Alu -8 125 1 218 336 67 25 chr18 23395372 23395491 -62593443 - L2 LINE L2 -24 3289 3166 385 267 82 22 chr18 23395603 23395738 -62593196 + L2 LINE L2 3161 3303 -10 183 80 0 0 chr18 23395740 23395765 -62593169 + (TGGA)n Simple_repeat Simple_repeat 2 26 0 2333 102 0 13 chr18 23395915 23396229 -62592705 + AluSq SINE Alu 2 311 -2 1964 140 0 3 chr18 23397059 23397370 -62591564 + AluSx SINE Alu 1 310 0 1208 152 143 6 chr18 23397566 23397815 -62591119 + L1MB3 LINE L1 5542 5798 -356 2114 121 10 13 chr18 23397815 23398122 -62590812 + AluSx SINE Alu 5 310 -2 1208 152 143 6 chr18 23398122 23398155 -62590779 + L1MB3 LINE L1 5798 5825 -329 2015 119 0 7 chr18 23398217 23398503 -62590431 + AluSx SINE Alu 1 284 -28 1831 162 3 15 chr18 23398510 23398837 -62590097 + L1MB3 LINE L1 5818 6140 -43 1554 165 0 29 chr18 23398839 23399118 -62589816 + AluJo SINE Alu 1 271 -41 498 356 21 38 chr18 23401118 23401354 -62587580 - MIR SINE MIR 0 262 31 1987 153 0 6 chr18 23401673 23401987 -62586947 + AluSx SINE Alu 1 312 0 1600 192 45 7 chr18 23401990 23402281 -62586653 + AluJo SINE Alu 1 302 -10 264 116 47 0 chr18 23402327 23402370 -62586564 - MIR SINE MIR -111 151 107 1514 154 30 91 chr18 23402401 23402732 -62586202 + MER67D LTR ERV1 1 311 -203 808 224 61 10 chr18 23402769 23402965 -62585969 + MER67D LTR ERV1 301 506 -8 22 0 0 0 chr18 23403231 23403253 -62585681 + AT_rich Low_complexity Low_complexity 1 22 0 1534 206 17 3 chr18 23403254 23403546 -62585388 + AluJo SINE Alu 1 296 -16 278 310 84 32 chr18 23406700 23406855 -62582079 + MIR3 SINE MIR 3 165 -43 249 372 57 57 chr18 23406861 23407299 -62581635 - L2 LINE L2 -8 3264 2827 2275 107 0 7 chr18 23407814 23408123 -62580811 - AluSx SINE Alu 0 312 6 3161 114 2 7 chr18 23408151 23408597 -62580337 - L1PB3 LINE L1 -2 6152 5709 289 308 111 0 chr18 23408777 23408894 -62580040 - MIR SINE MIR -70 192 63 2153 107 24 0 chr18 23409796 23410085 -62578849 + AluSq SINE Alu 1 296 -17 22 70 0 0 chr18 23410149 23410192 -62578742 + AT_rich Low_complexity Low_complexity 1 43 0 231 254 0 17 chr18 23410853 23410912 -62578022 + CT-rich Low_complexity Low_complexity 1 58 0 251 337 11 0 chr18 23411301 23411396 -62577538 + MIR3 SINE MIR 66 161 -47 1501 191 0 36 chr18 23412271 23412548 -62576386 + AluJo SINE Alu 1 267 -45 2171 160 37 52 chr18 23412570 23413051 -62575883 - MER74A LTR ERVL -84 474 1 730 285 104 39 chr18 23413073 23413101 -62575833 + L2 LINE L2 2439 2464 -849 2351 104 3 0 chr18 23413101 23413408 -62575526 - AluSx SINE Alu -4 308 1 730 285 104 39 chr18 23413408 23413911 -62575023 + L2 LINE L2 2464 3084 -229 768 297 14 5 chr18 23414000 23414209 -62574725 + MIR SINE MIR 8 218 -44 430 290 38 8 chr18 23414229 23414360 -62574574 + L2 LINE L2 3138 3272 0 358 320 20 20 chr18 23414518 23414668 -62574266 + MIR3 SINE MIR 41 190 -18 4422 177 26 48 chr18 23414684 23415391 -62573543 - L1MB7 LINE L1 0 6184 5511 1496 206 85 12 chr18 23415391 23415731 -62573203 + MLT1A1 LTR MaLR 1 365 0 4422 177 26 48 chr18 23415731 23416126 -62572808 - L1MB7 LINE L1 -673 5511 5109 2141 133 0 0 chr18 23416238 23416532 -62572402 + AluSx SINE Alu 1 294 -18 461 313 31 28 chr18 23416653 23416941 -62571993 - L1MC4a LINE L1 -1909 5899 5611 21 57 0 0 chr18 23417032 23417067 -62571867 + AT_rich Low_complexity Low_complexity 1 35 0 278 325 18 18 chr18 23417603 23417766 -62571168 - L1MC4a LINE L1 -1312 4834 4672 270 287 61 41 chr18 23417900 23418119 -62570815 - L1MC4a LINE L1 -1821 4325 4097 1477 181 58 7 chr18 23418119 23418396 -62570538 + AluJo SINE Alu 1 291 -21 270 287 61 41 chr18 23418396 23418469 -62570465 - L1MC4a LINE L1 -2049 4097 4027 207 184 0 0 chr18 23418489 23418527 -62570407 + (CTATA)n Simple_repeat Simple_repeat 5 42 0 1166 309 54 22 chr18 23418527 23419061 -62569873 - MER115 DNA AcHobo -2 691 141 448 260 60 30 chr18 23419106 23419306 -62569628 - L1MC4a LINE L1 -2145 4001 3796 182 340 0 0 chr18 23420015 23420062 -62568872 + L2 LINE L2 3217 3263 -9 378 262 28 55 chr18 23420242 23420387 -62568547 + MER5B DNA MER1_type 27 167 -11 362 299 68 58 chr18 23421482 23421568 -62567366 - MIR SINE MIR -34 228 144 2334 110 0 0 chr18 23421568 23421877 -62567057 - AluSx SINE Alu -3 309 1 362 299 68 58 chr18 23421877 23421997 -62566937 - MIR SINE MIR -118 144 20 294 240 216 76 chr18 23423552 23423723 -62565211 - MLT1J LTR MaLR -316 195 1 293 267 0 38 chr18 23423735 23423840 -62565094 - MER113 DNA MER1_type? -420 101 1 213 39 0 0 chr18 23424214 23424240 -62564694 + (TC)n Simple_repeat Simple_repeat 1 26 0 186 189 0 0 chr18 23424240 23424277 -62564657 + (CA)n Simple_repeat Simple_repeat 2 38 0 219 322 103 0 chr18 23424751 23424838 -62564096 - L2 LINE L2 -8 3264 3169 1003 245 12 25 chr18 23425335 23425576 -62563358 + MIR SINE MIR 15 252 -10 234 0 0 0 chr18 23425847 23425873 -62563061 + (TG)n Simple_repeat Simple_repeat 1 26 0 628 136 36 0 chr18 23425873 23425983 -62562951 - LTR9B LTR ERV1 -86 558 445 1485 91 9 56 chr18 23426233 23426465 -62562469 + AluSg/x SINE Alu 83 303 -7 2008 118 26 13 chr18 23427126 23427439 -62561495 + MER2 DNA MER2_type 1 317 -28 21 36 0 0 chr18 23427786 23427814 -62561120 + AT_rich Low_complexity Low_complexity 1 28 0 1816 114 114 0 chr18 23427815 23428086 -62560848 - AluSx SINE Alu -10 302 1 3350 92 22 4 chr18 23428096 23428555 -62560379 - L1MA3 LINE L1 0 6305 5839 226 288 30 15 chr18 23428682 23428748 -62560186 + MLT1I LTR MaLR 4 70 -339 235 300 14 0 chr18 23428760 23428830 -62560104 - MIR SINE MIR -113 149 79 260 278 14 0 chr18 23429164 23429236 -62559698 + L3b LINE CR1 1296 1368 -215 222 342 79 0 chr18 23429242 23429318 -62559616 - L2 LINE L2 -29 3284 3203 200 239 8 60 chr18 23432067 23432201 -62556733 + (TATAA)n Simple_repeat Simple_repeat 5 131 0 264 289 62 0 chr18 23432217 23432314 -62556620 - L2 LINE L2 0 3313 3211 2217 105 56 137 chr18 23433161 23433627 -62555307 + MSTA LTR MaLR 1 428 0 1314 212 52 64 chr18 23434259 23434794 -62554140 + MLT1E3 LTR MaLR 2 512 -112 293 131 34 32 chr18 23434797 23434863 -62554071 - MLT1E3 LTR MaLR -123 501 403 1217 130 0 22 chr18 23434887 23435072 -62553862 + L1PA11 LINE L1 5994 6174 0 410 174 0 0 chr18 23435085 23435154 -62553780 + MLT1E3 LTR MaLR 555 623 -1 3168 87 41 25 chr18 23436239 23436674 -62552260 + MLT2A1 LTR ERVL 1 442 -2 255 133 0 0 chr18 23436769 23436814 -62552120 + (CA)n Simple_repeat Simple_repeat 2 46 0 281 339 33 51 chr18 23437046 23437320 -62551614 - MLT1I LTR MaLR -114 295 27 312 290 99 15 chr18 23437945 23438076 -62550858 - MIR SINE MIR -119 143 2 231 306 122 10 chr18 23438258 23438356 -62550578 - L3 LINE CR1 -356 1221 1113 1864 158 35 74 chr18 23439243 23439647 -62549287 + MLT1B LTR MaLR 1 388 -2 229 271 0 0 chr18 23441124 23441172 -62547762 + (TCCA)n Simple_repeat Simple_repeat 1 48 0 232 217 0 0 chr18 23441199 23441245 -62547689 - L2 LINE L2 -5 3308 3263 538 286 81 5 chr18 23441818 23442003 -62546931 - MIR SINE MIR -11 251 53 236 230 217 52 chr18 23442308 23442443 -62546491 + MIR SINE MIR 17 168 -67 2159 135 3 0 chr18 23442652 23442956 -62545978 + AluSx SINE Alu 1 305 -7 194 348 139 17 chr18 23443732 23443847 -62545087 - MIR3 SINE MIR -11 197 69 527 240 33 8 chr18 23444090 23444211 -62544723 + L2 LINE L2 3186 3309 -4 180 274 94 60 chr18 23444187 23444304 -62544630 - L2 LINE L2 -10 3303 3183 * 22 0 0 0 chr18 23444982 23445004 -62543930 + AT_rich Low_complexity Low_complexity 1 22 0 200 280 0 0 chr18 23445327 23445377 -62543557 + CT-rich Low_complexity Low_complexity 1 50 0 251 365 35 48 chr18 23445429 23445574 -62543360 - L2 LINE L2 -1 3271 3129 500 355 90 5 chr18 23445584 23445784 -62543150 - MIR SINE MIR -19 243 27 266 284 39 49 chr18 23445859 23445961 -62542973 - L2 LINE L2 -212 3060 2960 631 301 70 16 chr18 23445966 23446222 -62542712 - MLT1I LTR MaLR -69 340 71 258 333 0 12 chr18 23446289 23446373 -62542561 - MIR SINE MIR -95 167 85 334 264 250 0 chr18 23448086 23448230 -62540704 + MER5A DNA MER1_type 10 189 0 2148 116 0 0 chr18 23448322 23448634 -62540300 - AluSx SINE Alu 0 312 1 2369 91 3 0 chr18 23449076 23449385 -62539549 - AluSp SINE Alu -3 310 1 223 292 0 15 chr18 23449602 23449667 -62539267 + GA-rich Low_complexity Low_complexity 5 68 0 1688 153 79 82 chr18 23449725 23450116 -62538818 + MLT1B LTR MaLR 1 390 0 1564 168 5 136 chr18 23451194 23451605 -62537329 + MLT2D LTR ERVL 11 367 -47 298 294 29 10 chr18 23451683 23451785 -62537149 + MIR3 SINE MIR 74 177 -31 264 173 40 53 chr18 23452318 23452393 -62536541 - L1ME4a LINE L1 -70 6051 5978 278 211 53 0 chr18 23452501 23452558 -62536376 + MER91B DNA MER1_type 2 61 -129 760 166 28 10 chr18 23453177 23453319 -62535615 - LTR18A LTR ERVL 0 357 225 1446 181 13 0 chr18 23453345 23453571 -62535363 - LTR18A LTR ERVL -113 244 16 882 194 16 0 chr18 23454115 23454301 -62534633 + MER53 DNA DNA 1 189 0 21 0 0 0 chr18 23454327 23454348 -62534586 + AT_rich Low_complexity Low_complexity 1 21 0 1684 169 0 38 chr18 23454667 23454987 -62533947 - AluJb SINE Alu -2 310 3 329 311 78 0 chr18 23454987 23455090 -62533844 - L2 LINE L2 -41 3231 3121 939 107 67 0 chr18 23455092 23455242 -62533692 + L1MA8 LINE L1 6132 6291 0 2415 117 37 3 chr18 23455771 23456097 -62532837 + MER1B DNA MER1_type 1 337 0 709 169 0 25 chr18 23460279 23460397 -62528537 - AluJ SINE Alu -14 298 184 1774 114 0 0 chr18 23460405 23460642 -62528292 + L1PA8 LINE L1 5933 6169 -3 1047 151 12 12 chr18 23460647 23460819 -62528115 - AluJ SINE Alu -112 200 29 360 298 152 31 chr18 23461963 23462154 -62526780 - MIR SINE MIR -1 261 48 2009 177 6 22 chr18 23462414 23462776 -62526158 - MLT1A1 LTR MaLR 0 365 10 2032 135 0 17 chr18 23462841 23463137 -62525797 - AluSx SINE Alu -21 291 1 31316 25 0 0 chr18 23463606 23468039 -62520895 - L1PA2 LINE L1 0 6155 1725 560 310 37 16 chr18 23468981 23469223 -62519711 + MLT1L LTR MaLR 368 614 -1 12225 48 82 4 chr18 23470895 23472485 -62516449 - L1P LINE L1 -4431 1715 2 296 320 116 54 chr18 23473053 23473347 -62515587 + L2 LINE L2 2955 3266 -6 273 276 95 38 chr18 23473808 23473913 -62515021 - L2 LINE L2 -13 3300 3190 471 323 99 10 chr18 23474141 23474333 -62514601 - MIR SINE MIR -8 254 46 286 319 50 0 chr18 23475050 23475169 -62513765 - MER117 DNA MER1_type -52 145 21 233 302 0 0 chr18 23476849 23476912 -62512022 - L2 LINE L2 -830 2484 2422 467 202 61 0 chr18 23478483 23478582 -62510352 + MER103 DNA DNA 17 121 -45 391 250 69 32 chr18 23479430 23479618 -62509316 + LTR33 LTR ERVL 327 521 0 2471 77 0 0 chr18 23481141 23481439 -62507495 - AluSc SINE Alu -11 298 1 502 191 95 38 chr18 23481717 23481822 -62507112 - MER81 DNA DNA -2 112 2 208 298 170 0 chr18 23481895 23481989 -62506945 + L2 LINE L2 3153 3262 -10 23 0 0 0 chr18 23482039 23482062 -62506872 + AT_rich Low_complexity Low_complexity 1 23 0 2411 143 33 0 chr18 23482068 23482459 -62506475 - L1MA7 LINE L1 -7 6284 5881 324 169 26 125 chr18 23482930 23483086 -62505848 - L1ME4a LINE L1 -7 6054 1191 313 321 56 0 chr18 23484131 23484293 -62504641 - L1M4 LINE L1 -3862 2284 2114 231 260 24 65 chr18 23484374 23484497 -62504437 + MLT1H LTR MaLR 91 208 -341 310 199 202 0 chr18 23484889 23484977 -62503957 + L1MC4 LINE L1 6439 6557 -1447 295 56 0 0 chr18 23484978 23485014 -62503920 + MER53 DNA DNA 1 36 -153 * 343 154 167 0 chr18 23485010 23485088 -62503846 - MER53 DNA DNA -86 103 13 * 419 69 167 0 chr18 23485018 23485090 -62503844 + MER53 DNA DNA 105 188 -1 310 238 0 0 chr18 23485092 23485155 -62503779 + L1MC4a LINE L1 6532 6594 -1214 366 42 0 0 chr18 23485155 23485203 -62503731 + (CA)n Simple_repeat Simple_repeat 2 49 0 4359 118 26 14 chr18 23485233 23485878 -62503056 - MER39B LTR ERV1 0 653 1 4198 151 70 67 chr18 23485934 23487033 -62501901 - MER39B-int LTR ERV1 -148 6183 3824 2447 93 9 6 chr18 23487045 23487368 -62501566 - L1PA8 LINE L1 -1 6171 5848 437 271 122 63 chr18 23487779 23488082 -62500852 + L2 LINE L2 2988 3308 -5 629 173 220 12 chr18 23488359 23488527 -62500407 + MER3 DNA MER1_type 6 208 -1 268 241 35 0 chr18 23490467 23490525 -62498409 - MER91B DNA MER1_type -129 61 2 277 200 46 0 chr18 23490643 23490708 -62498226 + L1ME4a LINE L1 5984 6051 -70 732 249 14 42 chr18 23491410 23491623 -62497311 - MIR SINE MIR -28 234 28 410 336 8 8 chr18 23491646 23491780 -62497154 + MER5B DNA MER1_type 5 138 -40 777 180 23 35 chr18 23491782 23491954 -62496980 + MLT1C LTR MaLR 3 172 -295 882 194 16 0 chr18 23492814 23493000 -62495934 + MER53 DNA DNA 1 189 0 21 0 0 0 chr18 23493026 23493047 -62495887 + AT_rich Low_complexity Low_complexity 1 21 0 838 220 0 21 chr18 23493366 23493552 -62495382 - AluJb SINE Alu -2 310 129 2016 83 0 4 chr18 23493658 23493911 -62495023 - AluSc SINE Alu -57 252 1 215 329 158 0 chr18 23494716 23494792 -62494142 - L2 LINE L2 -47 3225 3138 275 294 48 41 chr18 23494844 23494990 -62493944 + MER77 LTR ERV1 66 212 -393 252 277 65 69 chr18 23494982 23495213 -62493721 + MER77 LTR ERV1 154 383 -222 * 282 244 49 32 chr18 23499663 23499786 -62489148 - LTR33 LTR ERVL -67 454 330 285 286 90 53 chr18 23501894 23502027 -62486907 + MIR3 SINE MIR 5 142 -66 22 0 0 0 chr18 23502283 23502305 -62486629 + AT_rich Low_complexity Low_complexity 1 22 0 501 281 224 0 chr18 23503006 23503216 -62485718 - MLT1L LTR MaLR 0 615 359 2519 53 0 43 chr18 23503897 23504220 -62484714 + AluY SINE Alu 2 310 -1 225 282 129 0 chr18 23506778 23506863 -62482071 - MLT1L LTR MaLR -161 454 359 290 320 70 19 chr18 23506968 23507124 -62481810 - MLT1L LTR MaLR -451 164 1 1521 208 7 7 chr18 23508295 23508593 -62480341 + MLT1A1 LTR MaLR 68 365 0 254 315 154 39 chr18 23508840 23509042 -62479892 + MIR SINE MIR 36 259 -3 352 340 103 27 chr18 23510183 23510445 -62478489 + L2 LINE L2 2985 3266 -6 1100 282 109 35 chr18 23510763 23511278 -62477656 - MLT1H1 LTR MaLR -2 553 1 474 273 71 15 chr18 23511829 23512027 -62476907 - MLT2B1 LTR ERVL -311 209 1 1852 220 13 10 chr18 23512224 23512615 -62476319 + MSTD LTR MaLR 5 396 0 36921 35 0 0 chr18 23513477 23518630 -62470304 - L1PA2 LINE L1 -30 6125 973 26685 33 0 0 chr18 23518730 23522709 -62466225 + L1PA2 LINE L1 2177 6155 0 2118 244 83 29 chr18 23522714 23523403 -62465531 + L1ME1 LINE L1 5437 6162 -4 2145 100 4 0 chr18 23523630 23523909 -62465025 + AluSx SINE Alu 33 312 0 985 228 23 27 chr18 23524021 23524240 -62464694 + MER20 DNA MER1_type 2 219 0 243 361 113 8 chr18 23524301 23524434 -62464500 + L2 LINE L2 3126 3272 0 325 130 0 0 chr18 23524960 23525014 -62463920 - Alu SINE Alu 0 300 247 * 669 156 109 0 chr18 23525013 23525141 -62463793 - MLT1B LTR MaLR -248 142 1 223 292 0 15 chr18 23525199 23525264 -62463670 + CT-rich Low_complexity Low_complexity 5 68 0 2369 91 3 0 chr18 23525481 23525790 -62463144 + AluSp SINE Alu 1 310 -3 2052 126 0 0 chr18 23526232 23526544 -62462390 + AluSx SINE Alu 1 312 0 299 271 250 0 chr18 23526636 23526780 -62462154 - MER5A DNA MER1_type 0 189 10 306 0 0 0 chr18 23527102 23527136 -62461798 + (A)n Simple_repeat Simple_repeat 1 34 0 461 308 145 18 chr18 23527323 23527544 -62461390 - MIR SINE MIR -13 249 1 594 299 17 6 chr18 23527987 23528161 -62460773 + MIR SINE MIR 17 192 -70 182 337 34 71 chr18 23528231 23528498 -62460436 + L2 LINE L2 2721 2977 -337 261 200 0 0 chr18 23529026 23529071 -62459863 - MER5B DNA MER1_type 0 178 134 1405 190 11 11 chr18 23529071 23529334 -62459600 - MLT1C LTR MaLR 0 467 205 858 151 23 35 chr18 23529577 23529749 -62459185 - MLT1C LTR MaLR -295 172 3 418 326 7 7 chr18 23529751 23529886 -62459048 - MER5B DNA MER1_type -40 138 4 753 241 15 39 chr18 23529908 23530111 -62458823 + MIR SINE MIR 28 225 -37 228 303 25 43 chr18 23533846 23534008 -62454926 + L1MEd LINE L1 950 1108 -5011 685 264 121 60 chr18 23534188 23535060 -62453874 + L1ME3A LINE L1 596 1578 -4732 432 254 65 60 chr18 23535085 23535502 -62453432 + L1ME3A LINE L1 2921 3339 -2790 1227 255 74 50 chr18 23535543 23535685 -62453249 + L1ME3A LINE L1 5547 5684 -469 5269 99 30 7 chr18 23535685 23536422 -62452512 - L1PA13 LINE L1 0 6163 5410 1227 255 74 50 chr18 23536422 23536835 -62452099 + L1ME3A LINE L1 5684 6115 -38 * 4156 190 61 24 chr18 23536831 23538275 -62450659 + L1ME1 LINE L1 4647 6148 -18 24 0 0 0 chr18 23538903 23538927 -62450007 + AT_rich Low_complexity Low_complexity 1 24 0 246 313 8 8 chr18 23538949 23539080 -62449854 + (TA)n Simple_repeat Simple_repeat 1 131 0 2128 109 7 0 chr18 23540388 23540709 -62448225 - AluSx SINE Alu 0 323 1 211 306 28 37 chr18 23540785 23540893 -62448041 - L2 LINE L2 -248 3024 2918 209 193 18 35 chr18 23542309 23542366 -62446568 - MIR SINE MIR -60 202 147 667 253 54 58 chr18 23542380 23542641 -62446293 + MIR SINE MIR 3 262 0 302 276 149 0 chr18 23542647 23542734 -62446200 - MIR SINE MIR -64 144 45 1728 227 64 15 chr18 23542792 23543197 -62445737 + LTR40b LTR ERVL 1 425 -37 319 271 25 78 chr18 23543197 23543349 -62445585 + MIR SINE MIR 44 189 -19 1551 164 4 40 chr18 23543583 23543857 -62445077 + L1PB3 LINE L1 5884 6147 -7 34 24 0 0 chr18 23543857 23543898 -62445036 + AT_rich Low_complexity Low_complexity 1 41 0 2040 292 49 14 chr18 23543948 23544575 -62444359 + HERVL40 LTR ERVL 958 1606 -3924 4668 237 39 10 chr18 23544579 23545610 -62443324 + HERVL40 LTR ERVL 2522 3582 -1948 3076 284 45 16 chr18 23545655 23546526 -62442408 + HERVL40 LTR ERVL 3765 4660 -870 1683 171 50 7 chr18 23547444 23547743 -62441191 + AluJb SINE Alu 1 312 0 922 131 11 11 chr18 23547775 23547951 -62440983 + GA-rich Low_complexity Low_complexity 1 176 0 270 361 0 0 chr18 23548024 23548146 -62440788 + HERVL40 LTR ERVL 4552 4673 -350 * 1258 223 39 21 chr18 23548121 23548468 -62440466 + HERVL40 LTR ERVL 2783 5530 0 1901 228 126 21 chr18 23548468 23548938 -62439996 + LTR40a LTR ERVL 1 519 0 256 317 121 54 chr18 23549413 23549637 -62439297 - L2 LINE L2 -354 2960 2722 * 487 250 0 48 chr18 23549601 23549725 -62439209 + L2 LINE L2 3188 3305 -8 516 269 48 0 chr18 23549745 23549890 -62439044 - L2 LINE L2 -602 2712 2561 204 97 0 0 chr18 23550306 23550337 -62438597 + (TG)n Simple_repeat Simple_repeat 1 31 0 2332 171 13 10 chr18 23551609 23552000 -62436934 - MSTD LTR MaLR 0 396 5 1358 240 148 7 chr18 23552197 23552403 -62436531 + MLT2B1 LTR ERVL 1 177 -343 2231 107 7 0 chr18 23552403 23552693 -62436241 + AluSc SINE Alu 1 292 -17 1358 240 148 7 chr18 23552693 23552898 -62436036 + MLT2B1 LTR ERVL 177 470 -50 307 141 31 0 chr18 23552908 23552972 -62435962 + (TA)n Simple_repeat Simple_repeat 1 66 0 362 123 18 0 chr18 23552987 23553068 -62435866 + MLT2B1 LTR ERVL 394 520 0 478 330 85 4 chr18 23553158 23553394 -62435540 - Charlie8 DNA MER1_type -2162 255 1 183 114 0 0 chr18 23554500 23554535 -62434399 + (A)n Simple_repeat Simple_repeat 1 35 0 918 207 91 125 chr18 23555378 23555938 -62432996 - MER34C LTR ERV1 0 585 45 584 136 50 15 chr18 23557570 23558070 -62430864 + (CA)n Simple_repeat Simple_repeat 1 517 0 273 112 65 19 chr18 23558094 23558201 -62430733 + (CA)n Simple_repeat Simple_repeat 2 113 0 405 345 6 11 chr18 23558438 23558612 -62430322 - MIR SINE MIR -82 180 8 2349 98 0 0 chr18 23560173 23560480 -62428454 - AluY SINE Alu -4 307 1 226 254 153 0 chr18 23561304 23561363 -62427571 - L2 LINE L2 -69 3203 3136 568 267 104 63 chr18 23561413 23561812 -62427122 + MER21B LTR ERV1 24 433 -172 239 257 18 82 chr18 23561845 23562013 -62426921 + MER77 LTR ERV1 492 721 -12 291 211 84 14 chr18 23562920 23562991 -62425943 + L2 LINE L2 3196 3271 -1 1715 295 128 21 chr18 23563250 23564162 -62424772 - L2 LINE L2 0 3313 2500 234 105 0 0 chr18 23564162 23564200 -62424734 + (TA)n Simple_repeat Simple_repeat 1 38 0 351 0 0 0 chr18 23564200 23564239 -62424695 + (TG)n Simple_repeat Simple_repeat 1 39 0 1715 295 128 21 chr18 23564239 23564371 -62424563 - L2 LINE L2 -812 2501 2156 201 319 80 35 chr18 23565260 23565373 -62423561 - MIR SINE MIR -74 134 17 204 297 108 14 chr18 23567404 23567478 -62421456 - MIR SINE MIR -108 100 20 2546 53 0 34 chr18 23568450 23568771 -62420163 - AluY SINE Alu 0 311 2 22 35 0 0 chr18 23568997 23569026 -62419908 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr18 23569072 23569094 -62419840 + AT_rich Low_complexity Low_complexity 1 22 0 1846 78 8 0 chr18 23569094 23569337 -62419597 - L1MA5A LINE L1 -3 6294 6050 706 228 176 38 chr18 23569628 23569918 -62419016 - MER102b DNA MER1_type -11 330 1 2084 80 55 0 chr18 23570367 23570641 -62418293 + AluY SINE Alu 11 299 -12 347 121 0 0 chr18 23570915 23570973 -62417961 + L1MA3 LINE L1 6246 6303 -2 1593 187 21 7 chr18 23570985 23571274 -62417660 + AluJo SINE Alu 1 293 -19 246 299 63 68 chr18 23571276 23571497 -62417437 + L1ME1 LINE L1 28 247 -6612 303 251 114 36 chr18 23571838 23572005 -62416929 + L1ME1 LINE L1 1032 1211 -5644 7802 233 81 82 chr18 23572099 23575817 -62413117 + L1ME1 LINE L1 1554 5442 -1547 900 204 244 9 chr18 23575817 23576047 -62412887 + AluY SINE Alu 5 288 -23 7802 233 81 82 chr18 23576047 23576866 -62412068 + L1ME1 LINE L1 5442 6260 -729 43787 32 21 2 chr18 23576869 23582898 -62406036 + L1PA2 LINE L1 5 6155 0 2135 242 83 29 chr18 23582903 23583592 -62405342 + L1ME1 LINE L1 6248 6973 -4 2132 104 4 0 chr18 23583819 23584098 -62404836 + AluSx SINE Alu 33 312 0 985 228 23 27 chr18 23584210 23584429 -62404505 + MER20 DNA MER1_type 2 219 0 234 357 116 8 chr18 23584490 23584619 -62404315 + L2 LINE L2 3126 3268 -4 2309 69 13 16 chr18 23585144 23585450 -62403484 - AluY SINE Alu -6 305 1 231 309 16 0 chr18 23585559 23585682 -62403252 + (TA)n Simple_repeat Simple_repeat 2 126 0 1941 121 46 4 chr18 23585964 23586245 -62402689 + AluSg SINE Alu 1 293 -17 420 291 131 25 chr18 23586750 23586994 -62401940 - L1ME LINE L1 -417 5745 5476 22 0 0 0 chr18 23587074 23587096 -62401838 + AT_rich Low_complexity Low_complexity 1 22 0 203 241 66 153 chr18 23588171 23588308 -62400626 + L2 LINE L2 3147 3271 -1 2103 119 14 0 chr18 23589242 23589537 -62399397 - AluSg SINE Alu -11 299 1 479 308 57 23 chr18 23589891 23590109 -62398825 - MIR SINE MIR -9 253 29 2334 232 58 36 chr18 23590135 23590725 -62398209 - LTR26 LTR ERV1 0 603 1 1780 169 10 3 chr18 23592515 23592805 -62396129 + AluJb SINE Alu 1 292 -20 571 223 107 107 chr18 23592843 23593331 -62395603 + L1ME4a LINE L1 5634 6121 0 213 121 0 0 chr18 23593805 23593838 -62395096 + (CCCCCA)n Simple_repeat Simple_repeat 3 35 0 390 282 23 8 chr18 23594019 23594150 -62394784 - MIR SINE MIR -51 211 79 219 357 0 0 chr18 23594529 23594599 -62394335 + L2 LINE L2 3203 3272 0 1988 124 108 54 chr18 23594814 23595184 -62393750 - MLT1B LTR MaLR 0 390 1 804 268 26 22 chr18 23595513 23595744 -62393190 + MIR SINE MIR 23 254 -8 271 313 98 0 chr18 23596130 23596242 -62392692 + MIR SINE MIR 30 152 -110 2242 103 73 26 chr18 23597154 23597495 -62391439 - THE1B LTR MaLR -7 357 1 33 73 0 0 chr18 23597844 23597912 -62391022 + AT_rich Low_complexity Low_complexity 1 68 0 1410 220 68 102 chr18 23599235 23599708 -62389226 - MER77 LTR ERV1 -4 601 145 1494 199 3 48 chr18 23601185 23601522 -62387412 - MER77-int LTR ERV1 -55 4136 3815 6181 231 16 23 chr18 23601707 23603163 -62385771 - MER4B-int LTR ERV1 -2225 4533 3088 240 86 0 0 chr18 23604238 23604273 -62384661 + (TC)n Simple_repeat Simple_repeat 2 36 0 412 304 76 45 chr18 23604462 23604751 -62384183 + MLT1K LTR MaLR 239 536 -52 214 237 66 53 chr18 23604811 23604887 -62384047 + MER5A DNA MER1_type 107 183 -6 200 245 137 86 chr18 23604962 23605101 -62383833 - MIR3 SINE MIR -43 165 20 3917 121 12 69 chr18 23605506 23606214 -62382720 + L1PA13 LINE L1 5509 6178 0 1181 242 65 65 chr18 23606348 23606782 -62382152 + MER57B LTR ERV1 1 434 0 347 319 32 25 chr18 23606902 23607075 -62381859 - MIR SINE MIR -62 146 19 21 36 0 0 chr18 23608727 23608755 -62380179 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr18 23608878 23608906 -62380028 + AT_rich Low_complexity Low_complexity 1 28 0 2014 131 10 0 chr18 23608941 23609232 -62379702 + AluSx SINE Alu 6 299 -13 226 309 43 12 chr18 23609259 23609421 -62379513 + L1M4 LINE L1 2213 2379 -3767 1111 242 132 14 chr18 23609427 23609791 -62379143 + MLT1J2 LTR MaLR 1 407 -43 334 213 55 61 chr18 23610262 23610426 -62378508 + L1PA15 LINE L1 5802 5964 -201 * 1904 175 82 2 chr18 23610318 23610730 -62378204 + L1MA4 LINE L1 5854 6298 -2 807 113 0 0 chr18 23610830 23610936 -62377998 + AluSg/x SINE Alu 184 289 -23 192 278 233 0 chr18 23611007 23611097 -62377837 + L2 LINE L2 3136 3246 -26 1239 191 0 12 chr18 23611594 23611850 -62377084 - L1MA4 LINE L1 -3 6297 6045 439 358 151 15 chr18 23612121 23612526 -62376408 + L2 LINE L2 2807 3266 -6 1354 276 97 21 chr18 23612841 23613355 -62375579 - MLT1H1 LTR MaLR -2 553 1 383 328 156 28 chr18 23614303 23614840 -62374094 - L2 LINE L2 -732 2582 1977 427 208 37 82 chr18 23614946 23615130 -62373804 + MIR SINE MIR 38 208 -29 355 363 62 21 chr18 23615399 23615592 -62373342 + L2 LINE L2 3072 3272 0 183 266 78 16 chr18 23617666 23617730 -62371204 - MIR SINE MIR -166 96 29 22 0 0 0 chr18 23618445 23618467 -62370467 + AT_rich Low_complexity Low_complexity 1 22 0 683 248 224 0 chr18 23619167 23619377 -62369557 - MLT1L LTR MaLR 0 615 359 374 314 70 19 chr18 23619482 23619638 -62369296 - MLT1L LTR MaLR -451 164 1 337 290 0 16 chr18 23621995 23622119 -62366815 + CT-rich Low_complexity Low_complexity 1 122 0 1339 177 4 59 chr18 23622960 23623231 -62365703 - MLT1B LTR MaLR 0 390 135 3332 287 103 60 chr18 23624206 23625856 -62363078 + HAL1 LINE L1 1 1784 -723 2511 151 54 0 chr18 23625856 23626266 -62362668 + MSTB1 LTR MaLR 1 432 0 3332 287 103 60 chr18 23626266 23626965 -62361969 + HAL1 LINE L1 1784 2451 -56 824 217 6 0 chr18 23627011 23627172 -62361762 - FRAM SINE Alu -17 159 1 227 316 63 0 chr18 23627533 23627628 -62361306 - MER91C DNA MER1_type -5 135 35 1637 109 3 125 chr18 23627789 23628109 -62360825 - AluJo SINE Alu -18 294 14 217 257 114 51 chr18 23628149 23628324 -62360610 + MIR3 SINE MIR 2 187 -21 358 230 96 74 chr18 23629612 23629747 -62359187 + MIR3 SINE MIR 5 142 -66 1568 106 9 0 chr18 23630196 23630414 -62358520 - AluSp SINE Alu -8 305 86 247 155 35 17 chr18 23630789 23630847 -62358087 + GA-rich Low_complexity Low_complexity 2 60 0 432 240 72 106 chr18 23631771 23632175 -62356759 + L1ME4a LINE L1 5524 5913 -208 21 57 0 0 chr18 23632868 23632903 -62356031 + AT_rich Low_complexity Low_complexity 1 35 0 23 97 0 0 chr18 23635010 23635082 -62353852 + AT_rich Low_complexity Low_complexity 1 72 0 328 318 121 35 chr18 23635607 23635780 -62353154 + MER5A DNA MER1_type 2 189 0 2102 142 53 102 chr18 23637951 23638155 -62350779 - MER31A LTR ERV1 -1 484 272 1732 122 3 85 chr18 23638155 23638483 -62350451 + AluSx SINE Alu 1 301 -11 2102 142 53 102 chr18 23638483 23638787 -62350147 - MER31A LTR ERV1 -213 272 1 279 185 0 19 chr18 23639188 23639242 -62349692 + MER5A DNA MER1_type 26 78 -111 204 348 98 0 chr18 23639484 23639576 -62349358 + MIR SINE MIR 36 136 -72 817 272 75 14 chr18 23639978 23640257 -62348677 + HERV16 LTR ERVL 352 647 -4349 3287 173 9 6 chr18 23640317 23640867 -62348067 - MER68 LTR ERV1 -8 554 3 1476 164 34 57 chr18 23640887 23641209 -62347725 - AluJo SINE Alu 0 315 1 755 280 62 73 chr18 23641219 23641683 -62347251 - MLT1H LTR MaLR -19 530 72 598 248 204 50 chr18 23641731 23642394 -62346540 + LTR41 LTR ERVL 1 522 -1 1009 301 60 40 chr18 23642429 23642947 -62345987 + HERV16 LTR ERVL 744 1271 -3725 737 335 34 7 chr18 23642983 23643318 -62345616 + HERV16 LTR ERVL 1659 2015 -3060 1123 306 63 18 chr18 23643421 23643865 -62345069 + HERV16 LTR ERVL 1928 2391 -2605 679 164 52 0 chr18 23643872 23643988 -62344946 - MER68 LTR ERV1 -32 530 409 353 301 29 0 chr18 23644020 23644123 -62344811 + MER63 DNA MER1_type 1 732 -330 387 273 0 0 chr18 23644123 23644200 -62344734 + MER63 DNA MER1_type 979 1055 -7 1237 259 69 75 chr18 23644205 23644277 -62344657 + HERV16 LTR ERVL 2422 2493 -2503 1187 184 98 89 chr18 23644277 23644635 -62344299 + MLT1A1 LTR MaLR 5 365 0 1237 259 69 75 chr18 23644635 23645071 -62343863 + HERV16 LTR ERVL 2493 2927 -2069 222 37 0 0 chr18 23645152 23645179 -62343755 + (A)n Simple_repeat Simple_repeat 1 27 0 623 274 46 77 chr18 23645223 23645548 -62343386 + LTR16A LTR ERVL 136 450 0 224 153 0 59 chr18 23645875 23645960 -62342974 + (TTAA)n Simple_repeat Simple_repeat 4 83 0 671 280 95 72 chr18 23646676 23647148 -62341786 + LTR33A LTR ERVL 8 490 -33 5714 104 46 0 chr18 23647149 23647980 -62340954 + L1PA13 LINE L1 5290 6161 -2 204 40 0 0 chr18 23648332 23648357 -62340577 + (A)n Simple_repeat Simple_repeat 1 25 0 1005 168 0 0 chr18 23648364 23648513 -62340421 + FRAM SINE Alu 1 146 -30 264 185 169 31 chr18 23648914 23648979 -62339955 + LTR56 LTR ERV1 148 221 -224 551 139 0 0 chr18 23649200 23649272 -62339662 - FRAM SINE Alu -30 146 75 852 157 48 100 chr18 23649384 23649491 -62339443 + LTR56 LTR ERV1 230 300 -137 1965 120 18 0 chr18 23649491 23649766 -62339168 + AluSx SINE Alu 11 290 -22 852 157 48 100 chr18 23649766 23649898 -62339036 + LTR56 LTR ERV1 300 437 0 1753 150 56 147 chr18 23650003 23650538 -62338396 + LTR49-int LTR ERV1 3149 4584 -2707 3856 65 31 13 chr18 23650543 23651186 -62337748 + MER11A LTR ERVK 1 723 -513 241 191 0 0 chr18 23651535 23651577 -62337357 + Alu SINE Alu 1 42 -260 1151 113 0 6 chr18 23651585 23651745 -62337189 + AluSg/x SINE Alu 147 305 -5 338 229 72 72 chr18 23652418 23652654 -62336280 + LTR16A1 LTR ERVL 190 425 -32 2323 119 0 0 chr18 23653016 23653328 -62335606 - AluSx SINE Alu 0 312 1 740 144 16 8 chr18 23654489 23654614 -62334320 + L1MB3 LINE L1 6058 6183 0 1162 315 53 33 chr18 23654856 23654924 -62334010 - MLT1G1 LTR MaLR 0 595 530 2083 149 3 0 chr18 23654924 23655226 -62333708 + AluSx SINE Alu 1 303 -9 1162 315 53 33 chr18 23655226 23655668 -62333266 - MLT1G1 LTR MaLR -65 530 75 464 285 38 112 chr18 23656361 23656568 -62332366 + L1MC4 LINE L1 7307 7479 -563 976 204 20 5 chr18 23656568 23656764 -62332170 - MER105 DNA DNA -2 202 4 464 285 38 112 chr18 23656764 23656903 -62332031 + L1MC4 LINE L1 7479 7627 -415 * 1437 241 48 22 chr18 23656901 23657358 -62331576 - L1ME3 LINE L1 -193 5969 5501 486 217 39 100 chr18 23657370 23657550 -62331384 + L1ME3 LINE L1 5987 6155 -7 799 246 39 114 chr18 23657565 23658028 -62330906 + L1MC4 LINE L1 7615 8042 0 29 60 0 0 chr18 23659526 23659576 -62329358 + AT_rich Low_complexity Low_complexity 1 50 0 278 184 13 0 chr18 23659610 23659686 -62329248 + (TA)n Simple_repeat Simple_repeat 1 77 0 300 319 11 0 chr18 23659687 23659778 -62329156 + L1MC4 LINE L1 6613 6704 -1338 536 213 27 0 chr18 23659779 23660194 -62328740 + (TA)n Simple_repeat Simple_repeat 1 426 0 2225 109 0 0 chr18 23661001 23661295 -62327639 + AluSx SINE Alu 1 294 -18 21 0 0 0 chr18 23661463 23661484 -62327450 + AT_rich Low_complexity Low_complexity 1 21 0 1894 149 27 0 chr18 23661687 23661809 -62327125 + AluJb SINE Alu 1 118 -194 294 29 0 0 chr18 23661809 23661844 -62327090 + (CA)n Simple_repeat Simple_repeat 2 36 0 1894 149 27 0 chr18 23661844 23662016 -62326918 + AluJb SINE Alu 118 303 -9 1683 124 17 33 chr18 23662526 23662825 -62326109 + AluSx SINE Alu 5 298 -14 288 0 0 0 chr18 23662979 23663011 -62325923 + (TG)n Simple_repeat Simple_repeat 2 33 0 1819 121 77 0 chr18 23663531 23663843 -62325091 - AluJb SINE Alu 0 335 3 186 71 0 0 chr18 23663846 23663874 -62325060 + (ATTTG)n Simple_repeat Simple_repeat 3 30 0 255 405 8 0 chr18 23663980 23664106 -62324828 + MIR SINE MIR 1 127 -135 1168 190 186 75 chr18 23665619 23666071 -62322863 - MLT1H LTR MaLR -2 547 46 1083 168 82 5 chr18 23666209 23666405 -62322529 - AluJb SINE Alu -16 296 86 315 305 74 21 chr18 23666409 23666599 -62322335 + MLT1K LTR MaLR 39 238 -350 262 294 15 0 chr18 23667079 23667147 -62321787 - Charlie8 DNA MER1_type -2206 211 143 2162 138 0 0 chr18 23667527 23667839 -62321095 + AluSx SINE Alu 1 312 0 325 341 76 27 chr18 23667955 23668181 -62320753 + LTR50 LTR ERVL 3 216 -307 417 210 0 0 chr18 23668460 23668541 -62320393 + LTR33A LTR ERVL 441 521 -2 2179 99 3 30 chr18 23668693 23668995 -62319939 + AluSx SINE Alu 1 294 -18 2247 117 0 0 chr18 23669058 23669366 -62319568 + AluSx SINE Alu 1 308 -4 2244 128 150 5 chr18 23669735 23670109 -62318825 + MSTA LTR MaLR 1 428 0 187 340 0 0 chr18 23670309 23670359 -62318575 - L2 LINE L2 -9 3263 3214 436 233 26 95 chr18 23670568 23670701 -62318233 + MER104 DNA Tc2 2 120 -1778 2605 102 28 25 chr18 23670701 23671064 -62317870 + THE1B LTR MaLR 1 364 0 436 233 26 95 chr18 23671064 23671119 -62317815 + MER104 DNA Tc2 120 177 -3 25 0 0 0 chr18 23671120 23671145 -62317789 + AT_rich Low_complexity Low_complexity 1 25 0 822 201 0 6 chr18 23671670 23671829 -62317105 + AluJb SINE Alu 134 291 -21 825 154 0 23 chr18 23672020 23672150 -62316784 + FLAM_C SINE Alu 9 135 -8 1372 152 0 0 chr18 23672152 23672356 -62316578 + AluSg/x SINE Alu 85 288 -24 32 0 0 0 chr18 23672358 23672390 -62316544 + AT_rich Low_complexity Low_complexity 1 32 0 1189 192 0 9 chr18 23672395 23672606 -62316328 + AluJo SINE Alu 85 295 -17 1787 98 109 4 chr18 23672606 23672871 -62316063 - AluSc SINE Alu -16 293 1 1189 192 0 9 chr18 23672871 23672883 -62316051 + AluJo SINE Alu 295 306 -6 21 0 0 0 chr18 23672883 23672904 -62316030 + AT_rich Low_complexity Low_complexity 1 21 0 329 228 5 193 chr18 23674921 23675123 -62313811 - MER112 DNA MER1_type -96 164 1 2194 125 6 6 chr18 23675247 23675560 -62313374 - AluSq SINE Alu 0 313 1 237 65 0 0 chr18 23675631 23675662 -62313272 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 1621 187 14 7 chr18 23675662 23675940 -62312994 - AluJb SINE Alu -32 280 1 2053 104 17 0 chr18 23676302 23676590 -62312344 + AluSc SINE Alu 1 293 -16 21 0 0 0 chr18 23676861 23676882 -62312052 + AT_rich Low_complexity Low_complexity 1 21 0 2079 204 44 20 chr18 23677539 23677995 -62310939 + MLT1C LTR MaLR 1 467 0 2320 88 0 0 chr18 23678114 23678411 -62310523 - AluSx SINE Alu -10 302 6 2234 123 0 0 chr18 23678943 23679252 -62309682 + AluSx SINE Alu 1 309 -3 201 39 0 0 chr18 23679655 23679681 -62309253 + (T)n Simple_repeat Simple_repeat 1 26 0 2113 177 50 21 chr18 23679789 23680265 -62308669 + LTR1B LTR ERV1 261 772 -13 420 263 200 20 chr18 23680265 23680520 -62308414 + L2 LINE L2 3013 3313 0 357 24 0 0 chr18 23680548 23680590 -62308344 + (CA)n Simple_repeat Simple_repeat 1 42 0 2025 131 0 3 chr18 23680985 23681307 -62307627 + AluSx SINE Alu 1 321 0 5044 165 23 14 chr18 23681323 23682330 -62306604 - L1MB3 LINE L1 -20 6163 5148 782 301 101 64 chr18 23682332 23682617 -62306317 + L1MEd LINE L1 85 358 -5761 1466 135 0 0 chr18 23682617 23682832 -62306102 - AluSq SINE Alu -14 299 85 782 301 101 64 chr18 23682832 23683515 -62305419 + L1MEd LINE L1 358 1089 -5030 946 140 7 0 chr18 23684105 23684241 -62304693 - AluSq/x SINE Alu -176 137 1 1687 170 12 49 chr18 23685655 23685979 -62302955 - AluJb SINE Alu 0 312 1 772 249 95 28 chr18 23686547 23686832 -62302102 - MLT1J2 LTR MaLR 0 450 147 227 221 42 11 chr18 23687238 23687333 -62301601 + (TA)n Simple_repeat Simple_repeat 2 99 0 1912 176 101 15 chr18 23688243 23688641 -62300293 - MSTB1 LTR MaLR 0 432 1 1823 151 0 20 chr18 23688767 23689066 -62299868 + AluSx SINE Alu 2 294 -18 1923 141 20 13 chr18 23689345 23689649 -62299285 + AluSx SINE Alu 1 306 -6 21 0 0 0 chr18 23689656 23689677 -62299257 + AT_rich Low_complexity Low_complexity 1 21 0 1053 206 28 40 chr18 23689968 23690216 -62298718 + MLT2B1 LTR ERVL 33 277 -243 303 49 0 0 chr18 23690368 23690409 -62298525 + (CA)n Simple_repeat Simple_repeat 2 42 0 496 356 21 38 chr18 23692409 23692645 -62296289 - MIR SINE MIR 0 262 31 2045 117 7 0 chr18 23692964 23693255 -62295679 + AluSx SINE Alu 1 293 -19 218 221 70 58 chr18 23693815 23693901 -62295033 + L3 LINE CR1 1483 1569 -8 240 297 99 10 chr18 23694685 23694786 -62294148 + L2 LINE L2 3153 3262 -10 477 0 0 0 chr18 23694791 23694844 -62294090 + (TGAA)n Simple_repeat Simple_repeat 1 53 0 183 320 180 0 chr18 23696709 23696809 -62292125 - L2 LINE L2 -2 3270 3153 975 175 0 94 chr18 23696967 23697190 -62291744 + AluJo SINE Alu 2 203 -109 406 268 160 26 chr18 23697833 23698027 -62290907 - MIR SINE MIR -41 221 2 22 0 0 0 chr18 23699094 23699116 -62289818 + AT_rich Low_complexity Low_complexity 1 22 0 1038 176 70 5 chr18 23699132 23699319 -62289615 - MER20 DNA MER1_type -4 215 17 2240 126 0 0 chr18 23700705 23701014 -62287920 - AluSx SINE Alu -1 311 3 21 0 0 0 chr18 23701028 23701049 -62287885 + AT_rich Low_complexity Low_complexity 1 21 0 2249 137 20 52 chr18 23703355 23703758 -62285176 - MLT1B LTR MaLR 0 390 1 2365 107 0 0 chr18 23704528 23704836 -62284098 - AluSx SINE Alu -4 308 1 425 339 114 20 chr18 23705795 23706287 -62282647 - L2 LINE L2 -965 2349 1812 2010 123 50 73 chr18 23706633 23707014 -62281920 - THE1C LTR MaLR -3 372 1 231 275 43 0 chr18 23707139 23707208 -62281726 - L2 LINE L2 0 3272 3201 417 307 139 0 chr18 23707931 23708133 -62280801 - MIR SINE MIR 0 262 33 2406 89 0 16 chr18 23708226 23708539 -62280395 - AluSq SINE Alu -5 308 1 429 301 150 12 chr18 23708764 23708937 -62279997 - MIR SINE MIR -6 256 60 208 0 30 30 chr18 23709188 23709221 -62279713 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 852 193 0 0 chr18 23709223 23709368 -62279566 - AluJb SINE Alu -32 280 136 2272 121 0 0 chr18 23710390 23710695 -62278239 + AluSx SINE Alu 1 305 -7 818 139 74 0 chr18 23710979 23711101 -62277833 + FLAM_C SINE Alu 1 131 -2 594 301 44 26 chr18 23711174 23711400 -62277534 + MLT1K LTR MaLR 325 554 -34 23 33 0 0 chr18 23711614 23711644 -62277290 + AT_rich Low_complexity Low_complexity 1 30 0 2310 103 0 3 chr18 23711917 23712217 -62276717 + AluSg SINE Alu 1 299 -11 290 323 49 18 chr18 23712273 23712496 -62276438 + L1MC/D LINE L1 3958 4187 -1959 2032 141 0 7 chr18 23712496 23712801 -62276133 + AluJb SINE Alu 1 303 -9 424 266 58 112 chr18 23712809 23713254 -62275680 + L1MC/D LINE L1 4181 4587 -1559 2248 112 6 10 chr18 23713254 23713567 -62275367 + AluSx SINE Alu 1 312 0 424 266 58 112 chr18 23713567 23713634 -62275300 + L1MC/D LINE L1 4587 4656 -1490 2166 129 7 0 chr18 23713863 23714166 -62274768 - AluSx SINE Alu -7 305 1 295 290 93 12 chr18 23714196 23714358 -62274576 + L1P LINE L1 4874 5048 -1098 206 239 0 30 chr18 23714483 23714550 -62274384 + (CAAA)n Simple_repeat Simple_repeat 2 66 0 936 281 137 25 chr18 23714592 23715039 -62273895 + L1MC/D LINE L1 5267 5760 -370 770 156 0 33 chr18 23715080 23715202 -62273732 + FAM SINE Alu 25 142 -43 835 190 82 0 chr18 23715425 23715583 -62273351 + MER21B LTR ERV1 324 494 -369 32 57 0 0 chr18 23716457 23716510 -62272424 + AT_rich Low_complexity Low_complexity 1 53 0 604 276 75 49 chr18 23716517 23716983 -62271951 + L1ME4a LINE L1 5602 6116 -5 214 360 0 0 chr18 23717333 23717422 -62271512 + MIR SINE MIR 171 259 -3 3648 208 122 52 chr18 23717886 23718360 -62270574 + L1MC4 LINE L1 6771 7211 -831 978 173 0 25 chr18 23718360 23718522 -62270412 + FRAM SINE Alu 1 158 -8 3648 208 122 52 chr18 23718522 23719223 -62269711 + L1MC4 LINE L1 7211 8028 -14 501 234 58 58 chr18 23719999 23720012 -62268922 + MIR SINE MIR 109 121 -141 5000 161 138 10 chr18 23720012 23720916 -62268018 + LTR28 LTR ERV1 1 1020 0 501 234 58 58 chr18 23720916 23721056 -62267878 + MIR SINE MIR 120 262 0 1426 239 115 21 chr18 23721192 23721384 -62267550 + MLT1C LTR MaLR 1 174 -293 342 0 0 0 chr18 23721384 23721422 -62267512 + (CA)n Simple_repeat Simple_repeat 1 38 0 1426 239 115 21 chr18 23721422 23721655 -62267279 + MLT1C LTR MaLR 174 466 -1 1105 209 50 35 chr18 23722832 23722972 -62265962 + MLT1J2 LTR MaLR 1 148 -302 2118 171 68 44 chr18 23722972 23723427 -62265507 - MER31B LTR ERV1 0 466 1 1105 209 50 35 chr18 23723427 23723545 -62265389 + MLT1J2 LTR MaLR 148 263 -187 962 226 113 0 chr18 23723553 23723748 -62265186 - MER58A DNA MER1_type -7 217 1 494 310 66 33 chr18 23723854 23724067 -62264867 - MLT1I LTR MaLR -109 300 81 364 197 40 0 chr18 23724524 23724600 -62264334 + MER116 DNA Mariner 1 79 -1 1220 231 86 74 chr18 23725419 23725439 -62263495 - MLT2B1 LTR ERVL -11 462 444 300 111 0 0 chr18 23725439 23725484 -62263450 + (CA)n Simple_repeat Simple_repeat 2 46 0 1220 231 86 74 chr18 23725484 23725864 -62263070 - MLT2B1 LTR ERVL -29 444 70 2309 114 0 3 chr18 23725864 23726171 -62262763 + AluSx SINE Alu 1 306 -6 2030 140 7 7 chr18 23726179 23726479 -62262455 + AluSx SINE Alu 1 300 -12 1220 231 86 74 chr18 23726479 23726553 -62262381 - MLT2B1 LTR ERVL -409 64 3 218 240 346 29 chr18 23726618 23726722 -62262212 - MIR SINE MIR -77 185 49 389 306 58 29 chr18 23727144 23727350 -62261584 - MLT1K LTR MaLR -189 399 188 818 123 0 18 chr18 23727613 23727727 -62261207 + AluJ SINE Alu 2 113 -199 1033 140 59 32 chr18 23727790 23727976 -62260958 + AluJ SINE Alu 109 299 -13 2852 90 11 16 chr18 23728390 23728767 -62260167 + THE1C LTR MaLR 1 375 0 189 285 39 106 chr18 23728977 23729156 -62259778 - L2 LINE L2 -526 2788 2622 5482 97 5 9 chr18 23730258 23731020 -62257914 - L1MA2 LINE L1 0 6304 5546 2108 109 6 31 chr18 23731469 23731789 -62257145 + AluSx SINE Alu 1 312 0 1098 253 63 23 chr18 23733108 23733539 -62255395 - L1ME1 LINE L1 -5 6161 5714 242 275 77 77 chr18 23733663 23733845 -62255089 + L2 LINE L2 2932 3113 -159 2240 92 0 33 chr18 23734100 23734403 -62254531 + AluY SINE Alu 1 293 -18 213 39 0 0 chr18 23734457 23734483 -62254451 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2169 118 3 0 chr18 23734507 23734796 -62254138 - AluSx SINE Alu -22 290 1 538 108 24 0 chr18 23735775 23735858 -62253076 - L1MB8 LINE L1 -6 6172 6088 26 88 0 0 chr18 23735858 23735926 -62253008 + AT_rich Low_complexity Low_complexity 1 68 0 1593 142 20 8 chr18 23735930 23736184 -62252750 - AluSx SINE Alu -55 257 1 2208 99 7 0 chr18 23736650 23736942 -62251992 + AluSx SINE Alu 1 294 -18 415 93 0 292 chr18 23737598 23737834 -62251100 - MER53 DNA DNA 0 189 23 * 504 157 39 10 chr18 23737741 23737843 -62251091 + MER53 DNA DNA 82 186 -3 22 0 0 0 chr18 23738700 23738722 -62250212 + AT_rich Low_complexity Low_complexity 1 22 0 2291 113 0 3 chr18 23738735 23739046 -62249888 + AluSx SINE Alu 1 310 -2 2479 76 31 17 chr18 23739180 23739535 -62249399 + MER11A LTR ERVK 907 1266 0 2092 124 13 3 chr18 23739658 23739965 -62248969 + AluSx SINE Alu 1 310 -2 8454 122 8 35 chr18 23739972 23741409 -62247525 + LTR49-int LTR ERV1 3712 5109 -1222 803 89 0 6 chr18 23741409 23741527 -62247407 - L1PA8A LINE L1 -532 5599 5497 770 53 0 0 chr18 23741521 23741615 -62247319 + L1PA8A LINE L1 5623 5716 -415 * 1806 86 13 0 chr18 23741717 23741949 -62246985 - AluY SINE Alu -76 235 1 194 270 54 27 chr18 23742514 23742588 -62246346 + L2 LINE L2 2603 2678 -636 2234 89 26 26 chr18 23742609 23742922 -62246012 + AluSq SINE Alu 1 313 0 693 283 27 27 chr18 23744267 23744481 -62244453 + MLT1I LTR MaLR 1 214 -195 1536 231 92 62 chr18 23744481 23744738 -62244196 - MLT2B1 LTR ERVL 0 464 243 2281 105 0 38 chr18 23744738 23745053 -62243881 + AluSq SINE Alu 1 303 -10 1536 231 92 62 chr18 23745053 23745301 -62243633 - MLT2B1 LTR ERVL -221 243 4 1296 193 103 10 chr18 23745301 23745442 -62243492 - Ricksha DNA DNA -1693 353 185 20636 151 28 14 chr18 23745291 23748626 -62240308 - ERVL-B1-B1 LTR ERVL -4 5760 2379 2303 197 5 67 chr18 23748626 23749181 -62239753 - MLT2B1 LTR ERVL -2 513 1 422 111 32 0 chr18 23749182 23749245 -62239689 - ERVL-B1-B1 LTR ERVL -3386 2378 2314 1216 157 60 5 chr18 23749246 23749463 -62239471 + MER46A DNA MER2_type 1 229 -7 5476 176 25 21 chr18 23749471 23750435 -62238499 - ERVL-B1-B1 LTR ERVL -3451 2313 1346 * 5839 205 38 11 chr18 23750428 23751570 -62237364 - ERVL-B1-B1 LTR ERVL -4591 1173 1 250 156 0 22 chr18 23751570 23751605 -62237329 - Ricksha DNA DNA -2343 903 870 2032 189 65 40 chr18 23751654 23752099 -62236835 - MLT2B1 LTR ERVL -41 479 24 579 211 86 40 chr18 23752136 23752288 -62236646 + MLT1I LTR MaLR 239 397 -12 219 36 0 0 chr18 23752315 23752343 -62236591 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1228 312 109 30 chr18 23752392 23753087 -62235847 + L2 LINE L2 2224 2973 -341 905 139 15 0 chr18 23753124 23753261 -62235673 + L1MB1 LINE L1 6030 6168 0 228 304 8 80 chr18 23753300 23753425 -62235509 + L2 LINE L2 3119 3234 -79 348 24 0 0 chr18 23753486 23753527 -62235407 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 324 272 105 18 chr18 23753527 23753641 -62235293 - MIR SINE MIR -62 146 23 228 267 175 33 chr18 23756317 23756437 -62232497 - MIR SINE MIR -57 151 15 2471 143 16 3 chr18 23757176 23757561 -62231373 - MLT1B LTR MaLR 0 390 1 2189 117 0 0 chr18 23757625 23757915 -62231019 + AluSx SINE Alu 5 294 -18 476 285 11 8 chr18 23759560 23759717 -62229217 + MIR SINE MIR 4 158 -50 189 310 56 0 chr18 23759738 23759809 -62229125 + MIR3 SINE MIR 129 203 -5 4017 260 76 42 chr18 23760069 23760831 -62228103 - L1MEc LINE L1 -3519 2696 1962 2101 123 184 11 chr18 23760831 23761196 -62227738 + MSTA LTR MaLR 1 428 0 4017 260 76 42 chr18 23761196 23762745 -62226189 - L1MEc LINE L1 -4253 1962 351 184 313 16 16 chr18 23763269 23763333 -62225601 + MER5A DNA MER1_type 47 110 -79 2702 132 43 14 chr18 23763357 23763775 -62225159 + MSTB1 LTR MaLR 3 432 0 476 254 83 47 chr18 23765526 23765695 -62223239 + MIR SINE MIR 30 204 -58 242 156 0 0 chr18 23765728 23765773 -62223161 - LTR66 LTR ERVL -172 438 394 241 180 0 0 chr18 23765733 23765783 -62223151 + LTR66 LTR ERVL 394 443 -167 * 21 0 0 0 chr18 23765847 23765868 -62223066 + AT_rich Low_complexity Low_complexity 1 21 0 1719 170 0 17 chr18 23766349 23766637 -62222297 + AluJo SINE Alu 7 289 -23 22 35 0 0 chr18 23766642 23766671 -62222263 + AT_rich Low_complexity Low_complexity 1 29 0 223 279 0 89 chr18 23768815 23768894 -62220040 + L2 LINE L2 3242 3313 0 216 0 0 0 chr18 23769104 23769128 -62219806 + (T)n Simple_repeat Simple_repeat 1 24 0 265 249 40 51 chr18 23769323 23769504 -62219430 + L3 LINE CR1 1180 1453 -124 475 276 89 37 chr18 23769774 23769988 -62218946 + MLT1L LTR MaLR 155 379 -236 228 306 153 0 chr18 23771450 23771561 -62217373 + MARNA DNA Mariner 436 563 -23 207 0 0 0 chr18 23771700 23771723 -62217211 + (TC)n Simple_repeat Simple_repeat 1 23 0 223 232 167 54 chr18 23771953 23772121 -62216813 - MIR3 SINE MIR -4 204 18 532 208 143 19 chr18 23773239 23773393 -62215541 + MER3 DNA MER1_type 3 128 -81 30 27 0 0 chr18 23773496 23773533 -62215401 + AT_rich Low_complexity Low_complexity 1 37 0 227 271 313 0 chr18 23773553 23773649 -62215285 + MER5A DNA MER1_type 57 182 -7 298 284 2 15 chr18 23773690 23773771 -62215163 + MER5B DNA MER1_type 26 107 -82 376 276 32 39 chr18 23774871 23775027 -62213907 - L2 LINE L2 -11 3302 3148 661 306 73 45 chr18 23776270 23776431 -62212503 - L2 LINE L2 0 3313 3158 2181 115 7 0 chr18 23776431 23776726 -62212208 + AluSx SINE Alu 1 297 -15 661 306 73 45 chr18 23776726 23776946 -62211988 - L2 LINE L2 -155 3158 2921 4572 123 30 0 chr18 23777945 23778577 -62210357 + MER39B LTR ERV1 3 653 0 1048 127 85 32 chr18 23779101 23779290 -62209644 - MER39B LTR ERV1 -89 564 366 1513 284 9 9 chr18 23779290 23779716 -62209218 + L1MCb LINE L1 2 427 -5618 1163 194 0 15 chr18 23779721 23779917 -62209017 + AluJb SINE Alu 93 285 -27 191 88 29 0 chr18 23779920 23779954 -62208980 + (GA)n Simple_repeat Simple_repeat 2 36 0 555 231 30 34 chr18 23779983 23780128 -62208806 + L1MCb LINE L1 430 780 -5488 3418 214 75 13 chr18 23780227 23781525 -62207409 + L1MCb LINE L1 570 2091 -4473 317 250 16 0 chr18 23782250 23782314 -62206620 + L2 LINE L2 3203 3267 -5 522 249 50 91 chr18 23782322 23782543 -62206391 + MER58C DNA MER1_type 4 215 0 2284 191 21 80 chr18 23786929 23787464 -62201470 - MLT1D LTR MaLR 0 505 3 502 306 155 24 chr18 23787677 23787883 -62201051 - MIR SINE MIR -17 245 13 195 42 0 0 chr18 23788813 23788837 -62200097 + (A)n Simple_repeat Simple_repeat 1 24 0 259 178 20 0 chr18 23789514 23789615 -62199319 + (TA)n Simple_repeat Simple_repeat 1 103 0 732 226 52 26 chr18 23789627 23789782 -62199152 - AluJb SINE Alu -17 295 137 841 197 67 17 chr18 23789859 23790037 -62198897 - MER5A DNA MER1_type 0 189 3 659 299 46 5 chr18 23790137 23790354 -62198580 - MIR SINE MIR -21 241 16 275 229 35 141 chr18 23791751 23791921 -62197013 + LTR67 LTR ERVL 4 155 -402 445 246 137 23 chr18 23792012 23792187 -62196747 + LTR67 LTR ERVL 356 550 -7 369 162 0 0 chr18 23792800 23792868 -62196066 + CT-rich Low_complexity Low_complexity 1 68 0 354 268 76 94 chr18 23794068 23794292 -62194642 + L2 LINE L2 3094 3313 0 430 281 133 48 chr18 23794938 23795187 -62193747 + MLT1I LTR MaLR 71 340 -69 313 320 154 23 chr18 23795211 23795639 -62193295 - LTR33 LTR ERVL -37 484 1 1893 161 7 0 chr18 23795925 23796216 -62192718 - AluJb SINE Alu -19 293 1 380 269 50 28 chr18 23797194 23797376 -62191558 - L1M1 LINE L1 -793 5510 5325 4736 127 52 11 chr18 23798617 23799025 -62189909 + LTR39 LTR ERV1 1 391 -392 2319 114 0 0 chr18 23799025 23799332 -62189602 - AluSx SINE Alu -5 307 1 4736 127 52 11 chr18 23799332 23799673 -62189261 + LTR39 LTR ERV1 391 781 -2 203 292 31 15 chr18 23799871 23799936 -62188998 + L2 LINE L2 3248 3313 0 225 246 325 0 chr18 23801067 23801181 -62187753 + MIR SINE MIR 2 152 -110 215 213 0 43 chr18 23801327 23801374 -62187560 - L2 LINE L2 -201 3071 3027 444 306 59 16 chr18 23801782 23801968 -62186966 + MIR3 SINE MIR 11 204 -4 262 264 66 57 chr18 23802337 23802443 -62186491 + L2 LINE L2 3199 3305 -8 180 323 62 15 chr18 23803069 23803199 -62185735 + L2 LINE L2 2365 2500 -814 190 344 58 58 chr18 23803560 23803714 -62185220 + L2 LINE L2 3117 3270 -2 239 280 140 9 chr18 23805202 23805309 -62183625 - L2 LINE L2 0 3313 3193 1878 103 0 4 chr18 23805948 23806201 -62182733 - AluSq SINE Alu -8 305 54 415 341 50 5 chr18 23808393 23808613 -62180321 + MIR SINE MIR 10 239 -23 286 278 117 40 chr18 23808613 23808931 -62180003 - LTR16A LTR ERVL 0 450 99 1942 14 0 0 chr18 23809228 23809445 -62179489 - L1PA3 LINE L1 -255 5900 5684 2547 24 0 3 chr18 23809445 23809735 -62179199 + L1PA3 LINE L1 5858 6148 -7 202 190 35 35 chr18 23809940 23809998 -62178936 + MER5A DNA MER1_type 128 185 -4 2178 95 0 7 chr18 23810422 23810737 -62178197 - AluSg SINE Alu 0 313 1 208 272 12 37 chr18 23811580 23811661 -62177273 + MIR SINE MIR 23 101 -161 2438 75 0 0 chr18 23812142 23812436 -62176498 + AluY SINE Alu 1 294 -17 369 314 0 10 chr18 23812450 23812552 -62176382 + L2 LINE L2 3177 3277 -36 2008 181 5 62 chr18 23812558 23812608 -62176326 + MLT1A1 LTR MaLR 1 52 -313 1496 91 119 0 chr18 23812608 23812851 -62176083 + L1MA3 LINE L1 6034 6305 0 2008 181 5 62 chr18 23812851 23813187 -62175747 + MLT1A1 LTR MaLR 52 365 0 734 187 0 7 chr18 23813551 23813850 -62175084 + (TG)n Simple_repeat Simple_repeat 1 296 0 217 200 0 0 chr18 23813988 23814028 -62174906 - MIR SINE MIR -166 96 57 224 279 22 29 chr18 23815370 23815506 -62173428 + GA-rich Low_complexity Low_complexity 1 135 0 2484 114 67 10 chr18 23815792 23816194 -62172740 - MSTA LTR MaLR -3 425 1 364 286 21 21 chr18 23816248 23816388 -62172546 + MIR SINE MIR 2 141 -121 2337 90 13 10 chr18 23816415 23816715 -62172219 - AluSg SINE Alu -9 301 1 2210 124 0 0 chr18 23816718 23817017 -62171917 - AluSx SINE Alu -13 299 1 276 30 0 0 chr18 23817337 23817370 -62171564 + (TA)n Simple_repeat Simple_repeat 2 34 0 243 321 25 44 chr18 23817432 23817591 -62171343 + L2 LINE L2 3158 3313 0 3103 159 21 0 chr18 23817693 23818253 -62170681 - L1MB7 LINE L1 -19 6165 5594 953 181 11 37 chr18 23820131 23820319 -62168615 + MLT1D LTR MaLR 1 183 -322 557 152 0 0 chr18 23820360 23820452 -62168482 + FLAM_A SINE Alu 41 132 -10 1367 174 83 11 chr18 23820491 23820767 -62168167 + MLT1D LTR MaLR 206 501 -4 318 252 103 0 chr18 23821045 23821152 -62167782 - MIR SINE MIR -134 128 11 291 279 48 0 chr18 23821854 23821958 -62166976 + MER5B DNA MER1_type 70 178 0 805 260 20 24 chr18 23824572 23824826 -62164108 + MIR SINE MIR 7 259 -3 561 306 23 27 chr18 23825038 23825299 -62163635 - MIR SINE MIR 0 262 3 2396 80 3 7 chr18 23825370 23825695 -62163239 + AluY SINE Alu 1 311 0 841 270 60 45 chr18 23826523 23826904 -62162030 + L2 LINE L2 2926 3312 -1 2328 96 0 0 chr18 23828252 23828545 -62160389 + AluSg SINE Alu 1 293 -17 241 274 16 0 chr18 23828591 23828653 -62160281 - L2 LINE L2 -5 3308 3246 311 321 123 44 chr18 23828740 23828789 -62160145 - L2 LINE L2 -339 2975 2931 2215 110 0 7 chr18 23828789 23829088 -62159846 + AluSq SINE Alu 1 297 -16 311 321 123 44 chr18 23829088 23829771 -62159163 - L2 LINE L2 -383 2931 2185 444 338 50 28 chr18 23831057 23831456 -62157478 + L1M4 LINE L1 2142 2549 -3597 245 312 113 0 chr18 23831521 23831662 -62157272 + L1M4 LINE L1 2841 2997 -3149 313 159 14 43 chr18 23832077 23832146 -62156788 + MER5B DNA MER1_type 1 67 -111 247 272 43 11 chr18 23832308 23832400 -62156534 - MER5B DNA MER1_type -83 95 1 503 242 136 0 chr18 23832744 23832876 -62156058 + MIR SINE MIR 55 204 -58 694 269 86 0 chr18 23833053 23833287 -62155647 + MIR SINE MIR 9 262 0 21 71 0 0 chr18 23833668 23833710 -62155224 + AT_rich Low_complexity Low_complexity 1 42 0 210 143 0 0 chr18 23833892 23833927 -62155007 + (CA)n Simple_repeat Simple_repeat 2 36 0 207 0 0 0 chr18 23835860 23835883 -62153051 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 1595 148 0 81 chr18 23836111 23836408 -62152526 - AluJo SINE Alu -25 287 15 489 34 0 0 chr18 23836524 23836583 -62152351 + (TCTA)n Simple_repeat Simple_repeat 3 61 0 707 274 50 9 chr18 23836595 23836814 -62152120 - MIR SINE MIR -27 235 8 407 264 76 49 chr18 23836811 23836955 -62151979 - MIR SINE MIR -69 193 46 * 507 229 163 13 chr18 23837012 23837165 -62151769 - MER5A DNA MER1_type -7 182 7 2532 64 0 0 chr18 23838783 23839081 -62149853 + AluY SINE Alu 1 298 -13 2459 94 0 0 chr18 23839347 23839656 -62149278 - AluSc SINE Alu 0 309 1 1792 151 7 10 chr18 23839964 23840256 -62148678 + AluSx SINE Alu 3 293 -19 198 310 23 23 chr18 23841471 23841574 -62147360 + MIR SINE MIR 52 136 -72 23 0 0 0 chr18 23842010 23842033 -62146901 + AT_rich Low_complexity Low_complexity 1 23 0 311 354 86 8 chr18 23843014 23843257 -62145677 + MIR SINE MIR 1 262 0 234 156 0 0 chr18 23844022 23844067 -62144867 + (CA)n Simple_repeat Simple_repeat 2 46 0 237 169 15 62 chr18 23844111 23844176 -62144758 - L2 LINE L2 -25 3247 3186 232 381 40 27 chr18 23844838 23845137 -62143797 + L2 LINE L2 2606 2908 -406 237 283 13 14 chr18 23845519 23845610 -62143324 - MIR SINE MIR -40 168 82 2502 144 0 20 chr18 23845742 23846138 -62142796 - MLT1B LTR MaLR -2 388 1 1524 185 170 9 chr18 23847265 23847606 -62141328 - MSTD LTR MaLR 0 396 1 537 113 12 12 chr18 23848028 23848108 -62140826 - MADE1 DNA Mariner 0 80 1 511 249 58 42 chr18 23848626 23848815 -62140119 + MIR SINE MIR 52 243 -19 239 306 60 30 chr18 23849100 23849234 -62139700 + L2 LINE L2 2958 3095 -177 369 0 0 0 chr18 23849982 23850023 -62138911 + (CA)n Simple_repeat Simple_repeat 2 42 0 234 91 0 0 chr18 23850023 23850056 -62138878 + (GAAA)n Simple_repeat Simple_repeat 3 35 0 2450 206 29 16 chr18 23852818 23853303 -62135631 + MLT1F LTR MaLR 1 491 -51 426 226 12 0 chr18 23853308 23853392 -62135542 + MER96 DNA MER1_type? 6 90 -85 192 152 0 0 chr18 23853460 23853493 -62135441 + CT-rich Low_complexity Low_complexity 3 35 0 339 291 60 35 chr18 23854606 23854805 -62134129 - MIR SINE MIR 0 262 59 429 319 13 19 chr18 23855460 23855617 -62133317 + MIR SINE MIR 29 184 -78 641 235 11 125 chr18 23855630 23855911 -62133023 + MIR SINE MIR 13 261 -1 213 211 0 19 chr18 23855932 23855984 -62132950 + MIR SINE MIR 203 253 -9 195 42 0 0 chr18 23857013 23857037 -62131897 + (A)n Simple_repeat Simple_repeat 1 24 0 264 247 0 0 chr18 23857947 23858032 -62130902 + (TA)n Simple_repeat Simple_repeat 2 86 0 229 356 42 8 chr18 23858419 23858537 -62130397 + L2 LINE L2 3184 3305 -8 194 190 69 52 chr18 23858595 23858653 -62130281 + MIR SINE MIR 82 140 -68 511 282 99 9 chr18 23858666 23858879 -62130055 - MIR SINE MIR -10 252 21 265 139 0 23 chr18 23859032 23859075 -62129859 - MLT1L LTR MaLR -7 608 567 22 0 0 0 chr18 23859523 23859545 -62129389 + AT_rich Low_complexity Low_complexity 1 22 0 241 236 167 14 chr18 23860374 23860446 -62128488 + MLT1L LTR MaLR 3 85 -530 798 261 89 125 chr18 23860503 23860920 -62128014 + MLT1L LTR MaLR 109 609 -1 189 281 134 12 chr18 23861899 23861981 -62126953 - L2 LINE L2 0 3313 3222 283 200 12 12 chr18 23862004 23862084 -62126850 + (CATA)n Simple_repeat Simple_repeat 3 82 0 284 334 68 37 chr18 23862168 23862469 -62126465 - L2 LINE L2 -213 3059 2750 1247 332 111 36 chr18 23862479 23863791 -62125143 - L2 LINE L2 -696 2618 1209 2107 123 3 19 chr18 23863823 23864133 -62124801 - AluSx SINE Alu -5 307 3 848 212 146 31 chr18 23864287 23864575 -62124359 - MLT1F LTR MaLR -54 488 168 804 185 52 0 chr18 23864898 23865071 -62123863 - MER5A DNA MER1_type -7 182 1 1541 159 96 4 chr18 23865373 23865534 -62123400 - AluJb SINE Alu -17 295 150 186 71 0 0 chr18 23865534 23865562 -62123372 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1541 159 96 4 chr18 23865562 23865670 -62123264 - AluJb SINE Alu -162 150 1 302 273 140 14 chr18 23865732 23865875 -62123059 - MIR SINE MIR -35 227 67 187 164 0 73 chr18 23865958 23866013 -62122921 + MIR SINE MIR 119 169 -93 1062 131 12 0 chr18 23869068 23869236 -62119698 + AluSg/x SINE Alu 142 311 -1 411 289 50 22 chr18 23869543 23869723 -62119211 - MIR SINE MIR -69 193 9 180 0 0 0 chr18 23870250 23870270 -62118664 + (AAATG)n Simple_repeat Simple_repeat 1 20 0 255 292 34 11 chr18 23870309 23870398 -62118536 + CT-rich Low_complexity Low_complexity 3 93 0 413 244 92 0 chr18 23871028 23871159 -62117775 - MIR SINE MIR -69 193 51 2879 191 9 32 chr18 23871447 23872013 -62116921 + MER41C LTR ERV1 2 554 0 360 316 23 8 chr18 23872106 23872239 -62116695 + L2 LINE L2 3179 3313 0 2683 45 6 9 chr18 23872631 23872964 -62115970 + L1PA7 LINE L1 5823 6154 0 2464 138 46 14 chr18 23873017 23873236 -62115698 - MSTB LTR MaLR 0 426 215 2404 99 0 0 chr18 23873236 23873539 -62115395 - AluY SINE Alu -8 303 1 2464 138 46 14 chr18 23873539 23873732 -62115202 - MSTB LTR MaLR -211 215 1 41169 68 13 2 chr18 23874189 23880255 -62108679 + L1PA5 LINE L1 11 6147 -7 335 346 130 54 chr18 23880263 23880905 -62108029 + L2 LINE L2 2543 3230 -42 262 301 86 6 chr18 23881258 23881421 -62107513 - L1ME4a LINE L1 -1 6120 5945 392 273 60 35 chr18 23881508 23881790 -62107144 - L1MC5 LINE L1 -118 7843 7555 354 284 149 34 chr18 23882049 23882370 -62106564 - L1ME4a LINE L1 -495 5626 5269 288 225 28 0 chr18 23883995 23884066 -62104868 + L2 LINE L2 3226 3298 -15 286 235 118 29 chr18 23884249 23884385 -62104549 - L2 LINE L2 0 3313 3166 189 244 0 0 chr18 23885131 23885176 -62103758 - MIR SINE MIR 0 262 218 * 196 194 0 0 chr18 23885144 23885180 -62103754 - L2 LINE L2 -19 3294 3259 181 361 34 25 chr18 23885440 23885559 -62103375 - L2 LINE L2 -201 3071 2952 542 245 34 52 chr18 23886202 23886471 -62102463 - L1ME4a LINE L1 -182 5939 5676 262 245 223 0 chr18 23887633 23887727 -62101207 + L2 LINE L2 3199 3313 0 239 268 14 0 chr18 23887782 23887853 -62101081 + MIR SINE MIR 112 183 -79 189 0 0 0 chr18 23888181 23888202 -62100732 + (GGA)n Simple_repeat Simple_repeat 3 23 0 215 298 0 0 chr18 23889143 23889200 -62099734 + CT-rich Low_complexity Low_complexity 2 58 0 2156 133 0 0 chr18 23889674 23889983 -62098951 - AluSx SINE Alu -3 309 1 717 263 14 14 chr18 23891058 23891271 -62097663 + MIR SINE MIR 45 257 -5 201 133 0 0 chr18 23891784 23891814 -62097120 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 1647 145 0 106 chr18 23892941 23893272 -62095662 + AluJb SINE Alu 2 297 -5 2492 87 0 0 chr18 23894016 23894328 -62094606 - AluSx SINE Alu 0 312 1 206 299 37 37 chr18 23894703 23894810 -62094124 + L2 LINE L2 3162 3268 -4 601 290 142 45 chr18 23895499 23895851 -62093083 - LTR33A LTR ERVL -3 520 135 200 319 0 0 chr18 23897485 23897554 -62091380 - L3 LINE CR1 -5 1572 1504 1006 198 109 0 chr18 23898441 23898633 -62090301 + MER58C DNA MER1_type 1 213 -2 350 319 60 18 chr18 23898642 23898808 -62090126 - MER5A DNA MER1_type 0 189 17 225 357 31 8 chr18 23899244 23899373 -62089561 + L2 LINE L2 1759 1890 -1424 253 321 95 22 chr18 23899699 23899836 -62089098 + L2 LINE L2 3165 3311 -2 25 31 0 0 chr18 23900255 23900287 -62088647 + AT_rich Low_complexity Low_complexity 1 32 0 610 269 114 51 chr18 23900723 23901057 -62087877 + MLT1J2 LTR MaLR 71 425 -25 225 65 0 0 chr18 23901857 23901888 -62087046 + (TC)n Simple_repeat Simple_repeat 1 31 0 243 0 0 0 chr18 23902410 23902437 -62086497 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2187 100 7 0 chr18 23902444 23902733 -62086201 - AluSq SINE Alu -22 291 1 242 29 29 0 chr18 23902932 23902967 -62085967 + (TG)n Simple_repeat Simple_repeat 2 37 0 300 53 0 0 chr18 23905717 23905755 -62083179 + (CA)n Simple_repeat Simple_repeat 2 39 0 489 277 49 33 chr18 23906025 23906209 -62082725 - MLT1J2 LTR MaLR 0 450 264 21 57 0 0 chr18 23906707 23906742 -62082192 + AT_rich Low_complexity Low_complexity 1 35 0 70 97 0 0 chr18 23906758 23906975 -62081959 + AT_rich Low_complexity Low_complexity 1 217 0 239 127 0 18 chr18 23909468 23909523 -62079411 + (GGAA)n Simple_repeat Simple_repeat 2 55 0 316 195 32 0 chr18 23911760 23911914 -62077020 + (TA)n Simple_repeat Simple_repeat 1 159 0 298 113 47 47 chr18 23911992 23912142 -62076792 + (TA)n Simple_repeat Simple_repeat 1 150 0 438 222 5 2 chr18 23912250 23912684 -62076250 + (TA)n Simple_repeat Simple_repeat 1 435 0 229 182 73 9 chr18 23912696 23912806 -62076128 + (TA)n Simple_repeat Simple_repeat 1 117 0 239 182 0 18 chr18 23912809 23912864 -62076070 - LTR66 LTR ERVL -172 438 385 200 331 51 51 chr18 23913428 23913585 -62075349 - MIR3 SINE MIR -14 194 38 408 339 8 8 chr18 23913669 23913793 -62075141 + MIR SINE MIR 23 146 -62 189 314 0 0 chr18 23914920 23914971 -62073963 + L2 LINE L2 3263 3313 0 649 260 53 12 chr18 23915126 23915295 -62073639 + MER5B DNA MER1_type 2 177 -1 264 284 42 11 chr18 23915302 23915397 -62073537 - MIR SINE MIR -91 117 20 184 319 77 0 chr18 23915893 23915984 -62072950 - MIR SINE MIR -51 211 114 265 246 0 16 chr18 23916041 23916102 -62072832 - MIR SINE MIR -55 153 94 208 294 94 24 chr18 23916178 23916263 -62072671 + MIR SINE MIR 20 110 -152 191 242 0 42 chr18 23916282 23916402 -62072532 + GA-rich Low_complexity Low_complexity 4 118 0 1345 134 22 43 chr18 23917938 23918169 -62070765 - AluJb SINE Alu 0 312 87 527 302 104 18 chr18 23918809 23919031 -62069903 + MIR SINE MIR 21 261 -1 23 0 0 0 chr18 23919171 23919194 -62069740 + AT_rich Low_complexity Low_complexity 1 23 0 200 265 0 29 chr18 23920424 23920492 -62068442 + (CA)n Simple_repeat Simple_repeat 1 66 0 278 98 20 0 chr18 23921668 23921719 -62067215 + (TC)n Simple_repeat Simple_repeat 1 52 0 202 321 12 25 chr18 23923490 23923571 -62065363 - L2 LINE L2 -5 3308 3229 698 272 53 8 chr18 23924450 23924693 -62064241 + MIR SINE MIR 4 257 -5 22 0 0 0 chr18 23925186 23925208 -62063726 + AT_rich Low_complexity Low_complexity 1 22 0 479 207 0 0 chr18 23925253 23925335 -62063599 - L1M4 LINE L1 -1156 4990 4909 1101 138 22 0 chr18 23925337 23925518 -62063416 - L1MA8 LINE L1 -71 6220 6036 269 217 83 0 chr18 23925510 23925570 -62063364 - L1M4 LINE L1 -1187 4959 4895 * 4449 147 31 29 chr18 23925621 23926201 -62062733 - L1 LINE L1 -880 5266 4683 225 0 0 0 chr18 23926201 23926226 -62062708 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 4449 147 31 29 chr18 23926226 23926494 -62062440 - L1 LINE L1 -1463 4683 4417 2109 113 13 7 chr18 23926494 23926795 -62062139 - AluSc SINE Alu -6 303 1 180 400 35 35 chr18 23926970 23927115 -62061819 + L2 LINE L2 3127 3271 -1 378 338 92 19 chr18 23928307 23928514 -62060420 + MIR SINE MIR 35 256 -6 1581 153 10 68 chr18 23928698 23929005 -62059929 + AluJo SINE Alu 1 289 -23 1106 75 0 0 chr18 23929015 23929148 -62059786 + AluSg/x SINE Alu 163 295 -15 950 106 0 0 chr18 23929153 23929276 -62059658 + AluSp/q SINE Alu 173 295 -18 397 319 43 0 chr18 23929606 23929722 -62059212 - MIR SINE MIR -133 129 9 2361 100 0 0 chr18 23930083 23930424 -62058510 + AluY SINE Alu 1 341 0 1904 121 67 42 chr18 23930532 23930888 -62058046 - THE1C LTR MaLR -10 365 1 578 306 47 30 chr18 23931271 23931503 -62057431 + MIR SINE MIR 17 252 -10 385 282 0 0 chr18 23932728 23932813 -62056121 + L2 LINE L2 3161 3245 -27 554 279 32 45 chr18 23933308 23933645 -62055289 - LTR16A1 LTR ERVL -1 456 119 648 270 58 86 chr18 23934522 23934989 -62053945 + MLT1J LTR MaLR 28 481 -30 1783 168 31 0 chr18 23935324 23935615 -62053319 - AluJb SINE Alu -12 300 1 300 56 463 0 chr18 23935753 23935807 -62053127 - MADE1 DNA Mariner -1 79 1 398 257 67 0 chr18 23936056 23936161 -62052773 + L2 LINE L2 3184 3295 -18 219 163 38 0 chr18 23936161 23936241 -62052693 + (TA)n Simple_repeat Simple_repeat 2 84 0 227 97 0 0 chr18 23936241 23936272 -62052662 - LTR8A LTR ERV1 -520 207 177 331 134 78 0 chr18 23936274 23936416 -62052518 + (TA)n Simple_repeat Simple_repeat 1 153 0 182 338 127 49 chr18 23936986 23937128 -62051806 + L2 LINE L2 2937 3089 -183 2925 176 66 66 chr18 23937157 23937839 -62051095 - LTR8A LTR ERV1 -12 715 34 625 240 13 27 chr18 23937886 23938036 -62050898 + MIR SINE MIR 10 157 -105 1842 182 10 0 chr18 23938039 23938347 -62050587 + AluJo SINE Alu 1 311 -1 198 0 0 0 chr18 23938528 23938550 -62050384 + (T)n Simple_repeat Simple_repeat 1 22 0 335 262 19 0 chr18 23939305 23939408 -62049526 + (TA)n Simple_repeat Simple_repeat 2 106 0 23 0 0 0 chr18 23940826 23940849 -62048085 + AT_rich Low_complexity Low_complexity 1 23 0 236 284 0 0 chr18 23941736 23941803 -62047131 + A-rich Low_complexity Low_complexity 1 67 0 216 111 0 0 chr18 23942319 23942355 -62046579 + (TG)n Simple_repeat Simple_repeat 1 36 0 333 286 165 33 chr18 23943222 23943404 -62045530 + MIR SINE MIR 2 207 -55 1923 142 0 34 chr18 23944023 23944318 -62044616 + AluSx SINE Alu 1 285 -27 240 200 0 0 chr18 23944318 23944383 -62044551 + (TA)n Simple_repeat Simple_repeat 2 66 0 1752 189 20 0 chr18 23944400 23944876 -62044058 + AluJo SINE Alu 2 483 0 1802 209 119 28 chr18 23944929 23945392 -62043542 - MLT1D LTR MaLR 0 505 1 281 273 0 15 chr18 23946987 23947053 -62041881 + L2 LINE L2 3018 3082 -190 497 254 178 35 chr18 23947613 23947928 -62041006 + MLT1J2 LTR MaLR 51 410 -40 221 146 21 0 chr18 23949324 23949372 -62039562 + CT-rich Low_complexity Low_complexity 2 50 0 342 214 120 38 chr18 23950311 23950480 -62038454 + MLT1I LTR MaLR 266 409 0 391 256 73 46 chr18 23950481 23950852 -62038082 + MLT1J2 LTR MaLR 21 428 -22 768 284 108 28 chr18 23951313 23951749 -62037185 - L1ME LINE L1 -305 5816 5346 514 266 0 0 chr18 23951805 23951918 -62037016 - MER94 DNA DNA -20 114 2 706 264 93 68 chr18 23952148 23952459 -62036475 + L2 LINE L2 2994 3312 -1 21 57 0 0 chr18 23952779 23952814 -62036120 + AT_rich Low_complexity Low_complexity 1 35 0 369 43 0 0 chr18 23952872 23952919 -62036015 + (TG)n Simple_repeat Simple_repeat 2 48 0 266 222 32 16 chr18 23952920 23952983 -62035951 - MLT1J1 LTR MaLR -4 442 379 452 290 63 114 chr18 23953173 23953735 -62035199 + L1M4 LINE L1 4121 4650 -1496 2059 107 29 0 chr18 23953735 23954016 -62034918 + AluSx SINE Alu 24 312 0 452 290 63 114 chr18 23954016 23954073 -62034861 + L1M4 LINE L1 4650 4708 -1438 325 304 80 37 chr18 23954103 23954922 -62034012 + L1M4 LINE L1 4795 5658 -520 485 261 50 6 chr18 23954939 23955100 -62033834 - L1M4 LINE L1 -1984 4162 3995 * 1355 263 62 35 chr18 23955097 23955731 -62033203 - L1MEc LINE L1 -5085 1311 661 284 276 43 25 chr18 23955811 23955974 -62032960 - L1MC4 LINE L1 -1 8041 7876 28 0 0 0 chr18 23956189 23956217 -62032717 + AT_rich Low_complexity Low_complexity 1 28 0 264 270 95 40 chr18 23956482 23956682 -62032252 - HAL1b LINE L1 -656 692 482 233 391 0 9 chr18 23956773 23956883 -62032051 - MIR SINE MIR -1 261 153 3877 163 15 31 chr18 23957886 23958599 -62030335 - L1MA10 LINE L1 -10 6324 5623 295 365 39 14 chr18 23959129 23959337 -62029597 - L2 LINE L2 -1236 2078 1866 304 246 14 0 chr18 23959433 23959502 -62029432 + MIR3 SINE MIR 108 177 -31 348 255 66 0 chr18 23959588 23959694 -62029240 + L1MC5 LINE L1 7270 7382 -579 780 266 17 21 chr18 23959857 23960098 -62028836 + LTR16C LTR ERVL 252 491 0 571 258 77 55 chr18 23960112 23960527 -62028407 + L1MC5 LINE L1 7502 7925 -36 199 304 52 17 chr18 23961832 23961947 -62026987 - L2 LINE L2 -94 3219 3101 2388 128 17 3 chr18 23961949 23962309 -62026625 + MLT1B LTR MaLR 11 375 -15 1331 163 9 13 chr18 23962477 23962704 -62026230 - AluJo SINE Alu -86 226 1 636 212 17 63 chr18 23963643 23963825 -62025109 - MLT1D LTR MaLR -346 159 14 345 140 0 0 chr18 23964013 23964070 -62024864 + (TG)n Simple_repeat Simple_repeat 2 58 0 470 221 0 0 chr18 23964221 23964307 -62024627 + MLT1D LTR MaLR 36 121 -384 5960 88 9 1 chr18 23964308 23964758 -62024176 + L1PB1 LINE L1 5329 5774 -377 2136 122 0 10 chr18 23964758 23965052 -62023882 + AluSq SINE Alu 3 293 -20 303 28 0 0 chr18 23965056 23965092 -62023842 + (TAGA)n Simple_repeat Simple_repeat 3 38 0 5960 88 9 1 chr18 23965092 23965453 -62023481 + L1PB1 LINE L1 5776 6151 0 1633 168 70 75 chr18 23965479 23965877 -62023057 + MLT1D LTR MaLR 110 505 0 349 289 34 67 chr18 23965877 23966026 -62022908 + MIR SINE MIR 60 203 -59 * 359 273 85 28 chr18 23965999 23966175 -62022759 + MIR SINE MIR 24 209 -53 1003 169 11 28 chr18 23966533 23966711 -62022223 + MER5B DNA MER1_type 1 175 -3 22 56 0 0 chr18 23967979 23968015 -62020919 + AT_rich Low_complexity Low_complexity 1 36 0 1399 198 107 83 chr18 23968505 23968984 -62019950 - L1ME2 LINE L1 -10 6154 5665 1374 235 14 7 chr18 23973078 23973363 -62015571 + AluJb SINE Alu 5 291 -21 732 193 25 0 chr18 23973381 23973500 -62015434 - FLAM_A SINE Alu -10 123 2 2216 163 3 3 chr18 23973595 23973932 -62015002 - MER1B DNA MER1_type 0 337 1 258 276 129 70 chr18 23975959 23976356 -62012578 + L1ME LINE L1 13 441 -5629 4015 267 66 42 chr18 23976460 23978327 -62010607 + L1ME LINE L1 451 2447 -3633 430 62 250 0 chr18 23978327 23978391 -62010543 - MADE1 DNA Mariner 0 80 1 4015 267 66 42 chr18 23978391 23979502 -62009432 + L1ME LINE L1 2447 3530 -2550 2294 66 0 0 chr18 23979518 23979792 -62009142 + AluY SINE Alu 35 308 -3 180 0 0 0 chr18 23979904 23979924 -62009010 + (G)n Simple_repeat Simple_repeat 1 20 0 261 0 0 0 chr18 23979935 23979964 -62008970 + (A)n Simple_repeat Simple_repeat 1 29 0 288 228 8 134 chr18 23979966 23980093 -62008841 + MIR SINE MIR 150 260 -2 215 313 86 31 chr18 23980121 23980249 -62008685 + L2 LINE L2 3179 3313 0 925 291 99 62 chr18 23980674 23981172 -62007762 + MLT1L LTR MaLR 34 557 -58 757 243 76 24 chr18 23981172 23981382 -62007552 - MER58A DNA MER1_type -3 221 1 925 291 99 62 chr18 23981382 23981436 -62007498 + MLT1L LTR MaLR 557 607 -8 282 228 73 41 chr18 23981682 23981805 -62007129 + MLT1H LTR MaLR 108 234 -315 183 352 56 0 chr18 23982550 23982658 -62006276 + MIR SINE MIR 93 206 -56 26 0 0 0 chr18 23982792 23982818 -62006116 + AT_rich Low_complexity Low_complexity 1 26 0 2670 129 3 3 chr18 23983764 23984128 -62004806 + THE1B LTR MaLR 1 364 0 959 194 0 29 chr18 23984756 23984931 -62004003 + MER58B DNA MER1_type 172 341 0 1915 215 57 64 chr18 23985116 23985698 -62003236 + MLT1E2 LTR MaLR 69 623 -3 244 212 93 50 chr18 23985866 23985996 -62002938 + MLT1G3 LTR MaLR 404 526 -4 1645 182 71 25 chr18 23986807 23986902 -62002032 - MER44D DNA MER2_type -1882 609 520 2140 111 7 0 chr18 23986902 23987190 -62001744 - AluSq SINE Alu -23 290 1 1645 182 71 25 chr18 23987190 23987418 -62001516 - MER44D DNA MER2_type -1971 520 1 3229 133 13 36 chr18 23987999 23988548 -62000386 + MER34B LTR ERV1 1 536 -29 382 172 66 98 chr18 23988746 23988868 -62000066 + MLT1H LTR MaLR 431 548 -1 499 269 87 43 chr18 23988986 23989194 -61999740 + MIR SINE MIR 30 246 -16 470 287 98 62 chr18 23991974 23992281 -61996653 - L3 LINE CR1 -11 1566 1249 664 242 115 0 chr18 23993211 23993393 -61995541 - L1MD2 LINE L1 -12 6347 6145 294 132 0 0 chr18 23993527 23993580 -61995354 + (TC)n Simple_repeat Simple_repeat 1 53 0 263 281 18 61 chr18 23994497 23994611 -61994323 - MIR SINE MIR -97 165 57 332 253 38 0 chr18 23994896 23994975 -61993959 + L2 LINE L2 3190 3271 -42 303 265 20 0 chr18 23995167 23995269 -61993665 + MER103 DNA DNA 53 156 -10 24 0 0 0 chr18 23997496 23997520 -61991414 + AT_rich Low_complexity Low_complexity 1 24 0 530 224 37 0 chr18 23997683 23997790 -61991144 - MER94 DNA DNA -23 111 1 180 0 0 0 chr18 23998028 23998048 -61990886 + (T)n Simple_repeat Simple_repeat 1 20 0 641 184 22 44 chr18 23998153 23998309 -61990625 - FLAM_A SINE Alu 0 153 1 1020 169 43 0 chr18 23998309 23998493 -61990441 - MLT1D LTR MaLR -313 192 1 318 297 7 154 chr18 23998566 23998872 -61990062 - L2 LINE L2 -61 3211 2951 420 273 233 6 chr18 23999058 23999257 -61989677 - MIR SINE MIR -35 227 1 327 323 85 20 chr18 23999364 23999565 -61989369 - L2 LINE L2 -676 2638 2425 277 292 58 100 chr18 24000793 24000900 -61988034 + MIR SINE MIR 2 112 -150 2025 137 10 0 chr18 24000900 24001192 -61987742 - AluSq SINE Alu -18 295 1 277 292 58 100 chr18 24001192 24001324 -61987610 + MIR SINE MIR 112 231 -31 313 284 0 11 chr18 24001412 24001500 -61987434 + CT-rich Low_complexity Low_complexity 1 87 0 1373 158 0 0 chr18 24003362 24003571 -61985363 + AluJo SINE Alu 86 294 -18 49 71 0 0 chr18 24003761 24003859 -61985075 + AT_rich Low_complexity Low_complexity 1 98 0 247 324 19 19 chr18 24004304 24004412 -61984522 + MIR SINE MIR 148 255 -7 252 265 8 60 chr18 24004545 24004662 -61984272 + MIR SINE MIR 144 254 -8 2493 63 0 3 chr18 24005263 24005565 -61983369 + AluSc SINE Alu 1 301 -8 378 292 33 8 chr18 24006543 24006663 -61982271 - L2 LINE L2 0 3272 3150 2179 166 66 51 chr18 24006720 24007267 -61981667 - MER74A LTR ERVL -3 555 1 1866 171 0 10 chr18 24007530 24007839 -61981095 + AluJo SINE Alu 1 306 -6 338 343 57 17 chr18 24008071 24008246 -61980688 - MIR SINE MIR 0 262 81 280 237 178 8 chr18 24008853 24008971 -61979963 + MIR SINE MIR 48 185 -77 180 77 0 0 chr18 24009652 24009678 -61979256 + (CAAAC)n Simple_repeat Simple_repeat 3 28 0 2077 91 0 8 chr18 24009936 24010199 -61978735 + AluSx SINE Alu 13 273 -39 357 24 0 0 chr18 24010199 24010241 -61978693 + (TCTA)n Simple_repeat Simple_repeat 2 43 0 1877 99 0 34 chr18 24010640 24010903 -61978031 + AluSg SINE Alu 56 309 -1 26 0 0 0 chr18 24011038 24011064 -61977870 + GC_rich Low_complexity Low_complexity 1 26 0 983 242 57 95 chr18 24011078 24011492 -61977442 + L1M4 LINE L1 3593 4021 -2125 2086 142 0 0 chr18 24011492 24011795 -61977139 - AluSx SINE Alu -9 303 1 983 242 57 95 chr18 24011795 24011828 -61977106 + L1M4 LINE L1 4021 4054 -2092 1607 158 46 40 chr18 24011828 24012131 -61976803 + AluJo SINE Alu 6 310 -2 983 242 57 95 chr18 24012131 24012281 -61976653 + L1M4 LINE L1 4054 4168 -1978 794 212 141 0 chr18 24012277 24012461 -61976473 - L1ME LINE L1 -600 5566 5357 * 736 227 48 37 chr18 24012463 24012656 -61976278 + L1M4 LINE L1 4177 4375 -1771 1889 132 30 17 chr18 24012656 24012951 -61975983 + AluJb SINE Alu 1 299 -13 736 227 48 37 chr18 24012951 24013026 -61975908 + L1M4 LINE L1 4375 4448 -1698 224 250 62 16 chr18 24013119 24013183 -61975751 + L2 LINE L2 3211 3277 -36 1311 183 5 5 chr18 24014842 24015055 -61973879 + Tigger7 DNA MER2_type 1 213 -492 229 162 0 0 chr18 24015054 24015091 -61973843 + Tigger7 DNA MER2_type 2551 2587 0 * 2354 96 0 6 chr18 24015134 24015448 -61973486 + AluSx SINE Alu 1 312 0 4298 115 25 2 chr18 24016087 24016732 -61972202 + L1PB4 LINE L1 5451 6110 -46 882 117 83 14 chr18 24016732 24016776 -61972158 - MLT2A1 LTR ERVL 0 444 404 249 33 0 0 chr18 24016776 24016806 -61972128 + (TCTA)n Simple_repeat Simple_repeat 4 33 0 882 117 83 14 chr18 24016806 24016906 -61972028 - MLT2A1 LTR ERVL -40 404 290 361 331 75 0 chr18 24017650 24017783 -61971151 - MIR3 SINE MIR -8 200 58 237 303 0 0 chr18 24018815 24018914 -61970020 + (CA)n Simple_repeat Simple_repeat 1 99 0 1563 126 126 0 chr18 24019717 24019956 -61968978 + AluSg SINE Alu 1 269 -41 431 592 0 6 chr18 24019956 24020130 -61968804 + polypurine Low_complexity Low_complexity 2 174 0 257 218 228 10 chr18 24020217 24020318 -61968616 + MIR SINE MIR 120 242 -20 223 155 69 17 chr18 24023375 24023433 -61965501 + MIR SINE MIR 157 217 -45 1101 219 127 7 chr18 24024976 24025259 -61963675 - MLT1D LTR MaLR 0 505 189 240 35 0 0 chr18 24025436 24025465 -61963469 + (A)n Simple_repeat Simple_repeat 1 29 0 191 299 31 21 chr18 24028263 24028360 -61960574 - MIR SINE MIR -113 149 52 240 59 0 0 chr18 24028651 24028685 -61960249 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 182 345 16 36 chr18 24028696 24029000 -61959934 - L2 LINE L2 -1406 1908 1611 828 219 31 31 chr18 24029061 24029253 -61959681 + MER3 DNA MER1_type 10 201 -8 2113 102 0 3 chr18 24130025 24130309 -61858625 + AluSg SINE Alu 26 308 -2 1374 303 7 30 chr18 24130309 24130555 -61858379 + L1 LINE L1 2508 2741 -3405 2417 76 3 13 chr18 24130555 24130857 -61858077 - AluSp SINE Alu -14 299 1 1374 303 7 30 chr18 24130857 24131042 -61857892 + L1 LINE L1 2741 2929 -3217 2789 26 0 0 chr18 24131042 24131351 -61857583 - AluYb8 SINE Alu -9 309 1 381 216 17 60 chr18 24131493 24131609 -61857325 + L1ME1 LINE L1 6029 6139 -27 2276 116 7 0 chr18 24131796 24132099 -61856835 - AluSq SINE Alu -8 305 1 21 0 0 0 chr18 24134028 24134049 -61854885 + AT_rich Low_complexity Low_complexity 1 21 0 328 281 242 17 chr18 24137366 24137544 -61851390 + MIR SINE MIR 28 245 -17 245 220 0 0 chr18 24137779 24137829 -61851105 - L2 LINE L2 -5 3308 3259 658 318 10 0 chr18 24138037 24138229 -61850705 - MIR SINE MIR -7 255 62 215 333 28 0 chr18 24139264 24139336 -61849598 + L2 LINE L2 3192 3265 -48 246 274 14 27 chr18 24139639 24139712 -61849222 + MIR SINE MIR 82 153 -55 1767 177 0 3 chr18 24139714 24140031 -61848903 + AluJb SINE Alu 5 320 0 476 255 75 25 chr18 24140127 24140288 -61848646 - MLT1L LTR MaLR -83 532 364 500 317 98 50 chr18 24140982 24141224 -61847710 + L2 LINE L2 2910 3174 -98 2644 57 0 3 chr18 24141224 24141539 -61847395 - L1PA8 LINE L1 -4 6168 5855 500 317 98 50 chr18 24141539 24141634 -61847300 + L2 LINE L2 3174 3263 -9 193 353 43 52 chr18 24142342 24142458 -61846476 - L2 LINE L2 -187 3085 2971 473 92 13 0 chr18 24142619 24142695 -61846239 + (TTCA)n Simple_repeat Simple_repeat 3 79 0 431 289 78 32 chr18 24145267 24145485 -61843449 - MIR SINE MIR -1 261 34 283 125 0 21 chr18 24145685 24145733 -61843201 - U5 snRNA snRNA -69 47 1 532 301 13 59 chr18 24147113 24147255 -61841679 + MIR SINE MIR 24 153 -109 2317 78 0 0 chr18 24147255 24147567 -61841367 + AluY SINE Alu 1 312 0 532 301 13 59 chr18 24147567 24147659 -61841275 + MIR SINE MIR 153 248 -14 227 196 0 0 chr18 24149667 24149713 -61839221 + GA-rich Low_complexity Low_complexity 4 49 0 500 118 24 0 chr18 24149713 24149798 -61839136 + A-rich Low_complexity Low_complexity 3 89 0 3741 44 23 0 chr18 24149841 24150275 -61838659 - L1PA7 LINE L1 -4 6150 5707 23 0 0 0 chr18 24150763 24150786 -61838148 + AT_rich Low_complexity Low_complexity 1 23 0 39 38 0 0 chr18 24150827 24150880 -61838054 + AT_rich Low_complexity Low_complexity 1 53 0 345 255 43 43 chr18 24152360 24152501 -61836433 - MER5A DNA MER1_type -37 152 1 189 0 0 0 chr18 24152559 24152580 -61836354 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 322 274 96 33 chr18 24152951 24153117 -61835817 - MIR3 SINE MIR -30 178 2 229 286 61 136 chr18 24153151 24153298 -61835636 - L2 LINE L2 0 3272 3137 2053 129 0 0 chr18 24153871 24154179 -61834755 + AluSg SINE Alu 1 308 0 2242 105 0 44 chr18 24154764 24155079 -61833855 + AluY SINE Alu 1 301 -10 680 332 32 21 chr18 24155304 24155678 -61833256 + MLT1I LTR MaLR 28 405 -4 195 333 0 0 chr18 24156058 24156124 -61832810 - MIR SINE MIR -91 171 106 291 364 112 34 chr18 24156615 24157421 -61831513 + L2 LINE L2 2013 2881 -433 282 265 37 52 chr18 24157647 24157783 -61831151 + L2 LINE L2 3180 3313 0 1491 205 0 48 chr18 24159139 24159451 -61829483 + AluJo SINE Alu 3 299 -13 888 288 21 12 chr18 24159457 24159700 -61829234 - MIR SINE MIR -10 252 8 2324 246 65 37 chr18 24159750 24160211 -61828723 + L2 LINE L2 2090 2579 -735 2502 76 0 3 chr18 24160211 24160525 -61828409 + AluSq SINE Alu 1 313 0 2324 246 65 37 chr18 24160525 24160770 -61828164 + L2 LINE L2 2579 2816 -498 183 156 0 0 chr18 24160813 24160845 -61828089 + CT-rich Low_complexity Low_complexity 2 33 0 1956 154 0 0 chr18 24161068 24161367 -61827567 - AluJb SINE Alu -13 299 1 267 355 46 0 chr18 24161490 24161642 -61827292 + L2 LINE L2 2564 2722 -592 183 236 55 18 chr18 24162023 24162078 -61826856 - MER5C DNA MER1_type -181 143 87 425 293 42 52 chr18 24162602 24162793 -61826141 + MER5A DNA MER1_type 1 189 0 415 289 109 6 chr18 24162944 24163100 -61825834 + MIR SINE MIR 19 190 -72 203 261 14 14 chr18 24163203 24163272 -61825662 + (TATG)n Simple_repeat Simple_repeat 3 71 0 13083 15 0 0 chr18 24163920 24166277 -61822657 + L1HS LINE L1 3797 6153 -2 200 118 0 59 chr18 24166278 24166329 -61822605 + (A)n Simple_repeat Simple_repeat 1 48 0 201 359 106 0 chr18 24166605 24166747 -61822187 - L2 LINE L2 -2969 345 189 1426 108 0 5 chr18 24167020 24167206 -61821728 - AluSx SINE Alu -123 189 5 382 314 135 34 chr18 24167214 24167622 -61821312 - L1 LINE L1 -1464 4682 4234 210 261 62 31 chr18 24170376 24170441 -61818493 + MIR SINE MIR 34 100 -162 238 181 60 36 chr18 24171266 24171349 -61817585 - L1ME LINE L1 -281 5840 5756 14461 131 25 18 chr18 24171581 24173983 -61814951 + Tigger1 DNA MER2_type 1 2418 0 249 358 25 31 chr18 24174576 24174738 -61814196 - MIR SINE MIR -10 252 92 739 337 145 45 chr18 24174760 24176163 -61812771 - L2 LINE L2 -1 3271 1706 4064 174 32 34 chr18 24177045 24177185 -61811749 + L1MB8 LINE L1 4345 4484 -1694 1547 194 25 11 chr18 24177185 24177463 -61811471 + AluJo SINE Alu 1 282 -30 180 111 0 0 chr18 24177468 24177495 -61811439 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4064 174 32 34 chr18 24177495 24179187 -61809747 + L1MB8 LINE L1 4488 6178 0 1446 183 17 45 chr18 24179220 24179278 -61809656 + L1MB7 LINE L1 5821 5879 -305 2421 71 7 0 chr18 24179278 24179574 -61809360 + AluSp SINE Alu 6 303 -10 1446 183 17 45 chr18 24179574 24179870 -61809064 + L1MB7 LINE L1 5879 6165 -19 535 279 55 12 chr18 24181024 24181189 -61807745 + MIR SINE MIR 20 191 -71 239 385 0 0 chr18 24181401 24181497 -61807437 + MIR SINE MIR 59 154 -108 2124 124 32 13 chr18 24181818 24182197 -61806737 + L1MA4 LINE L1 5904 6289 -11 1109 265 78 42 chr18 24182206 24182779 -61806155 - MLT2F LTR ERVL -69 594 1 393 58 0 0 chr18 24182861 24182913 -61806021 + (TC)n Simple_repeat Simple_repeat 1 52 0 181 359 87 0 chr18 24184077 24184169 -61804765 - MIR SINE MIR -135 127 28 590 252 56 33 chr18 24184186 24184400 -61804534 + MER20 DNA MER1_type 1 219 0 259 188 0 25 chr18 24185035 24185115 -61803819 + CT-rich Low_complexity Low_complexity 2 79 0 2540 264 36 13 chr18 24185594 24186457 -61802477 + L1MEc LINE L1 45 927 -5469 1880 271 58 13 chr18 24186740 24187986 -61800948 + L1M4 LINE L1 3062 4403 -1743 400 228 48 7 chr18 24188052 24188197 -61800737 + L1M4 LINE L1 4429 4579 -1567 345 179 0 63 chr18 24188208 24188303 -61800631 + L1ME1 LINE L1 5899 5987 -179 785 188 0 7 chr18 24188347 24188501 -61800433 + L1MA10 LINE L1 6171 6323 -11 213 336 0 17 chr18 24189887 24190003 -61798931 + (CATATA)n Simple_repeat Simple_repeat 2 115 0 195 211 79 0 chr18 24190090 24190128 -61798806 - L2 LINE L2 -33 3239 3199 193 331 16 50 chr18 24190304 24190425 -61798509 + MIR SINE MIR 98 214 -48 342 355 44 18 chr18 24191247 24191767 -61797167 + ERVL LTR ERVL 4728 5261 -224 344 285 109 27 chr18 24192111 24192332 -61796602 + LTR16A LTR ERVL 206 444 -6 2067 119 0 0 chr18 24192872 24193150 -61795784 - AluSx SINE Alu -11 301 24 434 221 10 0 chr18 24194009 24194113 -61794821 + MER110A LTR ERV1 69 173 -295 274 206 29 15 chr18 24194390 24194458 -61794476 + MER110 LTR ERV1 423 491 0 567 229 0 0 chr18 24194874 24195018 -61793916 + (CA)n Simple_repeat Simple_repeat 1 144 0 438 193 224 62 chr18 24197301 24197419 -61791515 + MIR SINE MIR 14 166 -96 1772 133 97 0 chr18 24197419 24197728 -61791206 - MER44D DNA MER2_type 0 609 1 438 193 224 62 chr18 24197728 24197770 -61791164 + MIR SINE MIR 166 200 -62 1503 148 0 94 chr18 24198227 24198416 -61790518 - AluSx SINE Alu 0 312 159 2482 61 0 13 chr18 24198416 24198726 -61790208 - AluY SINE Alu -5 306 1 1503 148 0 94 chr18 24198726 24198833 -61790101 - AluSx SINE Alu -153 159 44 21 0 0 0 chr18 24199533 24199554 -61789380 + AT_rich Low_complexity Low_complexity 1 21 0 248 284 22 67 chr18 24200366 24200500 -61788434 - L1ME LINE L1 -359 5762 5635 2037 172 85 14 chr18 24201501 24201675 -61787259 + MLT1C LTR MaLR 1 161 -306 456 35 0 0 chr18 24201675 24201733 -61787201 + (CA)n Simple_repeat Simple_repeat 2 59 0 2037 172 85 14 chr18 24201733 24201994 -61786940 + MLT1C LTR MaLR 161 467 0 915 287 117 15 chr18 24202191 24202662 -61786272 - L1MC4 LINE L1 -267 7775 7257 461 266 0 7 chr18 24202684 24202827 -61786107 - L1MD2 LINE L1 -10 6349 6208 * 13193 48 4 4 chr18 24202825 24205511 -61783423 - L1PA5 LINE L1 -4 6150 3464 2054 187 32 9 chr18 24205511 24205945 -61782989 - L1MD2 LINE L1 -137 6222 5779 287 249 108 68 chr18 24206317 24206649 -61782285 + L1MDa LINE L1 1352 1775 -4651 272 258 0 0 chr18 24206646 24206712 -61782222 + L1ME1 LINE L1 35 100 -6296 * 1832 256 61 18 chr18 24206716 24207597 -61781337 + L1ME1 LINE L1 2423 3341 -2874 891 243 10 27 chr18 24207709 24208009 -61780925 + L1ME1 LINE L1 5332 5626 -607 1230 209 4 0 chr18 24208013 24208238 -61780696 + Tigger5 DNA MER2_type 1 226 -2097 383 132 59 0 chr18 24208234 24208302 -61780632 + Tigger5 DNA MER2_type 2245 2316 -7 * 643 218 69 0 chr18 24208313 24208487 -61780447 + L1ME1 LINE L1 5709 5894 -341 338 203 8 93 chr18 24208487 24208605 -61780329 + L1MB8 LINE L1 6063 6170 -8 2090 145 0 10 chr18 24208825 24209135 -61779799 - AluSx SINE Alu -5 307 1 243 0 0 0 chr18 24210077 24210104 -61778830 + (A)n Simple_repeat Simple_repeat 1 27 0 263 259 0 0 chr18 24211625 24211683 -61777251 + L3b LINE CR1 1374 1431 -152 900 176 10 31 chr18 24211730 24211923 -61777011 - MER5A DNA MER1_type 0 189 1 192 344 22 72 chr18 24211997 24212035 -61776899 - MIR SINE MIR -90 172 134 3753 110 37 0 chr18 24212035 24212580 -61776354 + MER61E LTR ERV1 1 565 -4 192 344 22 72 chr18 24212580 24212721 -61776213 - MIR SINE MIR -128 134 2 1122 169 46 50 chr18 24213389 24213647 -61775287 + MER33 DNA MER1_type 24 282 -2303 2077 113 23 0 chr18 24213647 24213949 -61774985 + AluSg1 SINE Alu 1 309 0 1122 169 46 50 chr18 24213949 24213992 -61774942 + MER33 DNA MER1_type 282 324 0 289 323 89 24 chr18 24214320 24214444 -61774490 + L2 LINE L2 3139 3270 -2 897 135 0 14 chr18 24215293 24215441 -61773493 - AluJb SINE Alu -2 310 165 1447 171 33 20 chr18 24215778 24216082 -61772852 + L1MC1 LINE L1 6018 6325 -8 6634 137 66 7 chr18 24216106 24217265 -61771669 - Tigger3b DNA MER2_type -3 1228 1 252 0 0 0 chr18 24217268 24217296 -61771638 + (CA)n Simple_repeat Simple_repeat 2 29 0 246 268 14 0 chr18 24217422 24217493 -61771441 + GA-rich Low_complexity Low_complexity 2 73 0 224 305 0 49 chr18 24217985 24218067 -61770867 + L3b LINE CR1 1349 1426 -157 396 333 97 56 chr18 24219582 24219973 -61768961 - L2 LINE L2 -42 3230 2824 459 0 0 0 chr18 24220336 24220387 -61768547 + (TG)n Simple_repeat Simple_repeat 2 52 0 493 240 223 25 chr18 24221149 24221391 -61767543 - LTR16C LTR ERVL -11 480 191 462 340 60 14 chr18 24223098 24223313 -61765621 + MIR SINE MIR 22 246 -16 974 278 38 35 chr18 24223395 24223762 -61765172 + MLT1I LTR MaLR 3 370 -39 776 158 32 13 chr18 24224020 24224178 -61764756 + L1M1 LINE L1 18 178 -7387 * 3575 195 17 60 chr18 24224155 24225006 -61763928 + L1M1 LINE L1 3124 4010 -3555 2000 144 0 7 chr18 24225006 24225312 -61763622 + AluSg SINE Alu 5 308 -2 3575 195 17 60 chr18 24225312 24225558 -61763376 + L1M1 LINE L1 4010 4265 -3300 2414 76 3 13 chr18 24225558 24225860 -61763074 - AluSp SINE Alu -14 299 1 3575 195 17 60 chr18 24225860 24226046 -61762888 + L1M1 LINE L1 4265 4457 -3108 2839 25 0 0 chr18 24226046 24226364 -61762570 - AluYb8 SINE Alu 0 318 1 3575 195 17 60 chr18 24226364 24226798 -61762136 + L1M1 LINE L1 4457 4761 -2804 * 6397 107 26 15 chr18 24226778 24227691 -61761243 + L1MA3 LINE L1 5130 6053 -252 2490 51 3 0 chr18 24227691 24227984 -61760950 + AluY SINE Alu 1 294 -17 6397 107 26 15 chr18 24227984 24228240 -61760694 + L1MA3 LINE L1 6053 6305 0 23 33 0 0 chr18 24228240 24228270 -61760664 + AT_rich Low_complexity Low_complexity 1 30 0 325 299 49 28 chr18 24228807 24228951 -61759983 - L2 LINE L2 -57 3256 3110 659 242 143 55 chr18 24229013 24229054 -61759880 - L1ME3 LINE L1 -76 6086 6050 1329 82 115 10 chr18 24229054 24229262 -61759672 + MER30 DNA MER1_type 1 230 0 659 242 143 55 chr18 24229262 24229583 -61759351 - L1ME3 LINE L1 -112 6050 5692 2519 204 119 43 chr18 24229590 24231014 -61757920 - L1ME3 LINE L1 -535 5629 4101 343 256 33 0 chr18 24231047 24231137 -61757797 - MLT1G LTR MaLR -34 556 464 1448 197 7 27 chr18 24231404 24231704 -61757230 - AluJo SINE Alu -18 294 1 4163 232 68 67 chr18 24231748 24231886 -61757048 + L1MC4a LINE L1 4826 4962 -1184 2075 123 0 26 chr18 24231886 24232188 -61756746 + AluSc SINE Alu 1 294 -15 4163 232 68 67 chr18 24232188 24234189 -61754745 + L1MC4a LINE L1 4962 5389 -757 386 282 158 57 chr18 24234235 24234654 -61754280 - L2 LINE L2 -610 2704 2244 250 313 122 9 chr18 24234657 24234772 -61754162 - MIR SINE MIR -89 173 46 255 299 0 15 chr18 24234838 24234905 -61754029 + L2 LINE L2 3201 3266 -6 2415 90 3 0 chr18 24237056 24237355 -61751579 - AluSp SINE Alu -13 300 1 303 282 0 0 chr18 24237535 24237613 -61751321 + MER117 DNA MER1_type 2 79 -118 297 0 0 0 chr18 24237934 24237967 -61750967 + (CA)n Simple_repeat Simple_repeat 2 34 0 792 258 122 4 chr18 24238114 24238343 -61750591 + MIR SINE MIR 7 262 0 401 196 155 10 chr18 24240450 24240547 -61748387 + MER81 DNA DNA 3 113 -1 21 0 0 0 chr18 24241064 24241085 -61747849 + AT_rich Low_complexity Low_complexity 1 21 0 635 196 17 11 chr18 24241085 24241264 -61747670 + (TA)n Simple_repeat Simple_repeat 1 180 0 2110 119 0 3 chr18 24241301 24241595 -61747339 - AluSg SINE Alu -17 293 1 883 245 9 0 chr18 24241608 24241824 -61747110 + L1ME2 LINE L1 5938 6155 -9 344 265 14 27 chr18 24241885 24242032 -61746902 - L1ME LINE L1 -436 5685 5541 26 0 0 0 chr18 24242160 24242186 -61746748 + AT_rich Low_complexity Low_complexity 1 26 0 717 149 91 0 chr18 24242186 24242307 -61746627 - FLAM_C SINE Alu 0 133 2 223 338 162 29 chr18 24243985 24244121 -61744813 + MIR SINE MIR 28 181 -81 203 358 12 0 chr18 24244391 24244472 -61744462 - L2 LINE L2 -28 3285 3204 354 303 9 0 chr18 24244862 24244971 -61743963 + L2 LINE L2 3202 3311 -2 401 362 74 56 chr18 24245296 24245633 -61743301 + L2 LINE L2 2909 3251 -21 209 122 0 24 chr18 24245723 24245764 -61743170 + (CA)n Simple_repeat Simple_repeat 1 40 0 1716 156 75 9 chr18 24246053 24246387 -61742547 + MLT1A1 LTR MaLR 10 365 0 1498 117 36 5 chr18 24246454 24246677 -61742257 - MER30 DNA MER1_type 0 230 1 1598 172 35 10 chr18 24247497 24247787 -61741147 + AluJb SINE Alu 1 297 -15 795 268 32 14 chr18 24247955 24248175 -61740759 - MER58A DNA MER1_type 0 224 1 228 145 26 13 chr18 24248356 24248432 -61740502 + (TTATA)n Simple_repeat Simple_repeat 3 79 0 1764 179 14 0 chr18 24248444 24248729 -61740205 - AluJb SINE Alu -23 289 1 443 290 72 21 chr18 24248856 24248920 -61740014 - L1ME4a LINE L1 -254 5867 5808 709 254 38 34 chr18 24248920 24249129 -61739805 + MER63A DNA MER1_type 1 210 0 443 290 72 21 chr18 24249129 24249343 -61739591 - L1ME4a LINE L1 -313 5808 5575 1995 114 108 9 chr18 24249418 24249759 -61739175 - THE1C LTR MaLR 0 375 1 1650 82 3 82 chr18 24249759 24250051 -61738883 - THE1C-int LTR MaLR 0 1580 1312 351 271 58 85 chr18 24250160 24250418 -61738516 + MLT1I LTR MaLR 159 409 0 4952 83 7 0 chr18 24250441 24251236 -61737698 - L1P3 LINE L1 -691 5463 4666 23 54 0 0 chr18 24251413 24251450 -61737484 + AT_rich Low_complexity Low_complexity 1 37 0 1746 151 3 71 chr18 24252262 24252587 -61736347 - AluJb SINE Alu -9 303 1 592 129 0 0 chr18 24252729 24252822 -61736112 - L1PB4 LINE L1 -180 5976 5884 350 172 115 0 chr18 24252998 24253085 -61735849 - L2 LINE L2 -1 3312 3216 30 27 0 0 chr18 24253182 24253219 -61735715 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr18 24253529 24253553 -61735381 + AT_rich Low_complexity Low_complexity 1 24 0 2312 82 0 20 chr18 24253922 24254227 -61734707 - AluSq SINE Alu -14 299 1 606 137 0 20 chr18 24254249 24254351 -61734583 - MLT1A1 LTR MaLR -265 100 1 318 258 55 28 chr18 24254786 24254894 -61734040 - MLT1I LTR MaLR -78 331 232 281 221 131 62 chr18 24254899 24255044 -61733890 - MLT1H LTR MaLR -22 527 373 4326 99 55 175 chr18 24255337 24255696 -61733238 - THE1C-int LTR MaLR -707 873 473 755 141 0 0 chr18 24255696 24255817 -61733117 + AluSg/x SINE Alu 186 306 -3 4326 99 55 175 chr18 24255817 24256328 -61732606 - THE1C-int LTR MaLR -1107 473 1 2019 116 99 9 chr18 24256328 24256672 -61732262 - THE1C LTR MaLR 0 375 1 30 27 0 0 chr18 24256732 24256769 -61732165 + AT_rich Low_complexity Low_complexity 1 37 0 466 316 71 21 chr18 24256790 24257072 -61731862 - L1M4 LINE L1 -754 5392 5097 11450 207 31 42 chr18 24257298 24259547 -61729387 - L1MA9 LINE L1 -21 7312 5041 306 50 0 0 chr18 24259547 24259587 -61729347 + (TG)n Simple_repeat Simple_repeat 2 41 0 11450 207 31 42 chr18 24259587 24261498 -61727436 - L1MA9 LINE L1 -2292 5041 3212 7213 45 7 2 chr18 24261498 24262644 -61726290 + L1PA5 LINE L1 5000 6149 -5 11450 207 31 42 chr18 24262644 24262951 -61725983 - L1MA9 LINE L1 -4121 3212 2903 774 230 0 0 chr18 24263092 24263244 -61725690 + FRAM SINE Alu 13 164 -12 6823 250 36 35 chr18 24263289 24266284 -61722650 - L1MA9 LINE L1 -4161 3007 14 876 134 0 0 chr18 24266509 24266636 -61722298 - FLAM_C SINE Alu -6 127 1 424 319 55 18 chr18 24267074 24267237 -61721697 + MIR SINE MIR 91 259 -3 2539 225 73 44 chr18 24267448 24268128 -61720806 - L1ME1 LINE L1 0 6961 6302 209 33 33 0 chr18 24268128 24268158 -61720776 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 2539 225 73 44 chr18 24268158 24268345 -61720589 - L1ME1 LINE L1 -659 6302 6122 2044 122 30 0 chr18 24268345 24268641 -61720293 - AluSx SINE Alu -7 305 1 2539 225 73 44 chr18 24268641 24269046 -61719888 - L1ME1 LINE L1 -839 6122 5642 1684 179 10 17 chr18 24269101 24269266 -61719668 - AluJb SINE Alu -23 289 125 288 0 0 0 chr18 24269266 24269298 -61719636 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1684 179 10 17 chr18 24269298 24269423 -61719511 - AluJb SINE Alu -187 125 1 1328 231 76 2 chr18 24269423 24269842 -61719092 - L1ME1 LINE L1 -3118 3823 3374 1071 261 22 109 chr18 24269874 24270076 -61718858 - L1ME1 LINE L1 -4396 2726 2508 2297 180 24 2 chr18 24270076 24270493 -61718441 - MSTB LTR MaLR 0 426 1 1071 261 22 109 chr18 24270493 24270743 -61718191 - L1ME1 LINE L1 -4614 2508 2370 4861 36 2 2 chr18 24270743 24271329 -61717605 + L1PA4 LINE L1 5567 6152 -3 1071 261 22 109 chr18 24271329 24271661 -61717273 - L1ME1 LINE L1 -4752 2370 2010 * 1818 249 34 37 chr18 24271641 24272533 -61716401 - L1ME1 LINE L1 -4887 1536 817 474 321 102 19 chr18 24272744 24273118 -61715816 - L1ME1 LINE L1 -5994 429 25 265 243 33 125 chr18 24273290 24273442 -61715492 - MIR SINE MIR -39 223 86 842 210 287 25 chr18 24277715 24278154 -61710780 + L1MC4 LINE L1 7489 8042 0 213 39 0 0 chr18 24280442 24280468 -61708466 + (T)n Simple_repeat Simple_repeat 1 26 0 204 135 27 0 chr18 24282133 24282170 -61706764 + (CATATA)n Simple_repeat Simple_repeat 3 40 0 21 0 0 0 chr18 24282533 24282554 -61706380 + AT_rich Low_complexity Low_complexity 1 21 0 243 161 0 18 chr18 24282563 24282619 -61706315 - L1ME4a LINE L1 -11 6110 6056 23 86 0 0 chr18 24282641 24282699 -61706235 + AT_rich Low_complexity Low_complexity 1 58 0 317 250 36 12 chr18 24282742 24282910 -61706024 + (TA)n Simple_repeat Simple_repeat 2 173 0 263 299 113 57 chr18 24282912 24283283 -61705651 - L1ME4a LINE L1 -155 5966 5575 24 67 0 0 chr18 24284443 24284488 -61704446 + AT_rich Low_complexity Low_complexity 1 45 0 534 272 61 133 chr18 24284797 24285628 -61703306 + L2 LINE L2 2494 3272 0 459 200 0 0 chr18 24286688 24286773 -61702161 + Charlie5 DNA MER1_type 6 90 -2522 1718 201 5 5 chr18 24286802 24287190 -61701744 + Charlie5 DNA MER1_type 2236 2623 0 322 284 43 17 chr18 24287240 24287356 -61701578 + MER5B DNA MER1_type 54 172 -6 340 293 24 73 chr18 24287524 24287688 -61701246 - MIR SINE MIR 0 262 107 201 352 23 0 chr18 24290517 24290605 -61698329 - L2 LINE L2 -24 3289 3200 214 312 169 32 chr18 24291441 24291595 -61697339 - MIR SINE MIR -40 222 48 266 353 73 0 chr18 24291644 24291794 -61697140 - MIR SINE MIR -48 214 54 200 297 168 20 chr18 24291858 24291959 -61696975 + MIR SINE MIR 29 144 -64 241 319 17 8 chr18 24292088 24292207 -61696727 + L1ME3A LINE L1 5832 5951 -219 34 24 0 0 chr18 24292219 24292260 -61696674 + AT_rich Low_complexity Low_complexity 1 41 0 5966 185 81 8 chr18 24292365 24293927 -61695007 + L1MC1 LINE L1 4602 6332 -1 5603 163 26 17 chr18 24293923 24295476 -61693458 + L1MA10 LINE L1 4762 6327 -7 * 514 294 27 16 chr18 24296036 24296223 -61692711 + MER5A DNA MER1_type 1 189 0 21 0 0 0 chr18 24296288 24296309 -61692625 + AT_rich Low_complexity Low_complexity 1 21 0 207 345 0 0 chr18 24298287 24298374 -61690560 + A-rich Low_complexity Low_complexity 3 89 0 21 100 0 0 chr18 24298855 24298925 -61690009 + AT_rich Low_complexity Low_complexity 1 70 0 312 273 55 77 chr18 24298934 24299428 -61689506 - L1ME4a LINE L1 -26 6095 5613 1129 188 43 0 chr18 24299435 24299643 -61689291 - AluJo SINE Alu -7 305 89 240 232 0 0 chr18 24299676 24299732 -61689202 - L1ME4a LINE L1 -535 5586 5531 189 385 63 38 chr18 24300632 24301029 -61687905 - L2 LINE L2 -373 2941 2535 1021 226 70 29 chr18 24302042 24302383 -61686551 + MER113 DNA MER1_type? 91 445 -76 971 220 68 4 chr18 24302408 24302644 -61686290 - MIR SINE MIR -10 252 2 31 68 0 0 chr18 24302915 24302974 -61685960 + AT_rich Low_complexity Low_complexity 1 59 0 22 70 0 0 chr18 24303127 24303170 -61685764 + AT_rich Low_complexity Low_complexity 1 43 0 231 36 0 0 chr18 24303197 24303225 -61685709 + (CA)n Simple_repeat Simple_repeat 1 28 0 264 313 68 49 chr18 24303360 24303523 -61685411 - MIR SINE MIR -93 169 4 8096 203 56 13 chr18 24303637 24304017 -61684917 - L1MB1 LINE L1 0 6232 5870 306 50 0 0 chr18 24304017 24304057 -61684877 + (CA)n Simple_repeat Simple_repeat 2 41 0 8096 203 56 13 chr18 24304057 24304906 -61684028 - L1MB1 LINE L1 -362 5870 5059 4721 173 66 3 chr18 24304906 24305754 -61683180 - MER54A LTR ERVL 0 901 1 8096 203 56 13 chr18 24305754 24306401 -61682533 - L1MB1 LINE L1 -1173 5059 4442 219 36 0 0 chr18 24306401 24306429 -61682505 + (TC)n Simple_repeat Simple_repeat 2 29 0 * 423 0 0 0 chr18 24306428 24306475 -61682459 + (TG)n Simple_repeat Simple_repeat 2 48 0 8096 203 56 13 chr18 24306429 24309001 -61679933 - L1MB1 LINE L1 -1790 4442 1550 6211 33 0 1 chr18 24309003 24309782 -61679152 - L1PA4 LINE L1 -2 6153 5376 2179 254 23 29 chr18 24309783 24310221 -61678713 - L1MB1 LINE L1 -4516 1615 1176 1746 185 3 17 chr18 24310221 24310519 -61678415 - AluJb SINE Alu -18 294 1 2304 100 6 13 chr18 24310528 24310839 -61678095 - AluSx SINE Alu -3 309 1 2179 254 23 29 chr18 24310839 24311340 -61677594 - L1MB1 LINE L1 -4963 1168 628 773 293 33 73 chr18 24311705 24312156 -61676778 - L1MB1 LINE L1 -5458 673 1 21 36 0 0 chr18 24312181 24312209 -61676725 + AT_rich Low_complexity Low_complexity 1 28 0 414 57 0 0 chr18 24313044 24313097 -61675837 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 2301 109 0 0 chr18 24313102 24313395 -61675539 - AluSx SINE Alu -19 293 1 3748 216 74 34 chr18 24313742 24315073 -61673861 + L1MD2 LINE L1 3918 5372 -987 974 107 7 0 chr18 24315073 24315213 -61673721 + L1MA2 LINE L1 6164 6304 0 3748 216 74 34 chr18 24315213 24316060 -61672874 + L1MD2 LINE L1 5372 6184 -175 587 228 31 0 chr18 24316168 24316330 -61672604 + L1MD3 LINE L1 7823 7989 -6 1302 200 94 0 chr18 24316917 24317172 -61671762 - AluJb SINE Alu -33 279 1 206 269 90 90 chr18 24317286 24317453 -61671481 + L2 LINE L2 3009 3175 -97 23 0 0 0 chr18 24319258 24319281 -61669653 + AT_rich Low_complexity Low_complexity 1 23 0 419 354 25 0 chr18 24320926 24321087 -61667847 + L2 LINE L2 2888 3052 -220 353 291 67 76 chr18 24324904 24325220 -61663714 - L1MEd LINE L1 -5114 1005 693 2299 150 13 3 chr18 24326305 24326691 -61662243 - MLT1B LTR MaLR 0 390 1 36 62 0 0 chr18 24327002 24327066 -61661868 + AT_rich Low_complexity Low_complexity 1 64 0 1252 290 56 9 chr18 24327220 24327754 -61661180 - L1MC4a LINE L1 -1871 5937 5379 1651 152 67 11 chr18 24327769 24328052 -61660882 + AluSx SINE Alu 1 299 -13 427 255 47 28 chr18 24328302 24328514 -61660420 + L1M4 LINE L1 4493 4708 -1438 321 302 122 0 chr18 24328606 24328745 -61660189 + L1MA7 LINE L1 4864 5019 -1127 2502 170 24 12 chr18 24328812 24329317 -61659617 + L1MA7 LINE L1 5549 6059 -232 381 245 5 27 chr18 24329323 24329469 -61659465 + L1MA7 LINE L1 6145 6281 -10 972 306 69 32 chr18 24329804 24329897 -61659037 - LTR16A LTR ERVL 0 450 362 2192 166 38 24 chr18 24329897 24330348 -61658586 + MSTB2 LTR MaLR 1 457 0 972 306 69 32 chr18 24330348 24330448 -61658486 - LTR16A LTR ERVL -88 362 267 704 276 130 84 chr18 24330448 24331017 -61657917 + MLT1G1 LTR MaLR 1 595 0 972 306 69 32 chr18 24331017 24331256 -61657678 - LTR16A LTR ERVL -183 267 1 341 322 56 34 chr18 24331365 24331685 -61657249 - ERVL LTR ERVL -375 5389 5063 1049 339 56 28 chr18 24331715 24332430 -61656504 - ERVL LTR ERVL -1255 4509 3775 1255 268 98 30 chr18 24332471 24332996 -61655938 - MLT1G1 LTR MaLR 0 595 5 1807 341 71 25 chr18 24333021 24333636 -61655298 - ERVL LTR ERVL -2069 3695 3110 1998 100 65 0 chr18 24333636 24333915 -61655019 + AluSx SINE Alu 1 297 -15 1807 341 71 25 chr18 24333915 24334884 -61654050 - ERVL LTR ERVL -2654 3110 1979 694 319 11 36 chr18 24334874 24335281 -61653653 - ERVL LTR ERVL -3121 1875 1417 * 823 261 106 19 chr18 24335392 24335867 -61653067 - MLT1H1 LTR MaLR -43 512 8 535 155 0 86 chr18 24335919 24336000 -61652934 + LTR40a LTR ERVL 5 75 -444 1918 133 37 3 chr18 24336000 24336300 -61652634 - AluSx SINE Alu -1 311 2 535 155 0 86 chr18 24336300 24336334 -61652600 + LTR40a LTR ERVL 75 110 -409 200 244 0 0 chr18 24337119 24337160 -61651774 + MIR SINE MIR 219 259 -3 260 323 21 0 chr18 24337425 24337518 -61651416 + MER94 DNA DNA 21 115 -19 417 319 114 55 chr18 24337797 24338271 -61650663 + L2 LINE L2 1910 2411 -903 388 334 158 24 chr18 24338501 24338590 -61650344 + L2 LINE L2 2462 2538 -734 2527 106 8 24 chr18 24338590 24338968 -61649966 - THE1C LTR MaLR 0 375 4 388 334 158 24 chr18 24338968 24339432 -61649502 + L2 LINE L2 2538 3090 -182 275 241 13 0 chr18 24339448 24339527 -61649407 - MER116 DNA Mariner 0 80 1 488 239 124 0 chr18 24339535 24339648 -61649286 + L2 LINE L2 3187 3313 0 221 356 40 27 chr18 24340829 24340978 -61647956 + MIR3 SINE MIR 55 205 -3 3408 152 67 18 chr18 24341299 24341975 -61646959 - L1MA9 LINE L1 0 6312 5604 28 48 0 0 chr18 24342550 24342592 -61646342 + AT_rich Low_complexity Low_complexity 1 42 0 484 220 67 147 chr18 24342743 24342798 -61646136 - L2 LINE L2 0 3313 3255 2313 90 0 10 chr18 24342798 24343108 -61645826 - AluY SINE Alu 0 311 5 484 220 67 147 chr18 24343108 24343398 -61645536 - L2 LINE L2 -58 3255 2996 2113 138 0 3 chr18 24343731 24344029 -61644905 - AluSx SINE Alu -15 297 1 2356 100 0 3 chr18 24344100 24344399 -61644535 - AluSx SINE Alu -14 298 1 315 344 0 0 chr18 24344640 24344730 -61644204 + L1MC4 LINE L1 6613 6702 -1340 1959 126 31 0 chr18 24344888 24345174 -61643760 + AluSx SINE Alu 1 295 -17 22 35 0 0 chr18 24345176 24345205 -61643729 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr18 24345476 24345504 -61643430 + AT_rich Low_complexity Low_complexity 1 28 0 532 342 57 38 chr18 24345993 24346256 -61642678 + L3b LINE CR1 1284 1551 -32 326 193 24 24 chr18 24346384 24346467 -61642467 - MER63 DNA MER1_type -845 85 3 778 250 88 17 chr18 24346474 24346835 -61642099 + L2 LINE L2 2625 3006 -307 817 146 8 0 chr18 24346860 24346983 -61641951 + FLAM_C SINE Alu 9 132 -11 684 263 29 14 chr18 24347005 24347214 -61641720 + MLT1H LTR MaLR 117 328 -221 573 200 161 39 chr18 24348321 24348476 -61640458 + MER5A DNA MER1_type 10 183 -6 2279 115 0 0 chr18 24348713 24349018 -61639916 - AluSc SINE Alu -4 305 1 187 308 29 58 chr18 24349500 24349604 -61639330 + MIR SINE MIR 162 262 0 225 289 64 92 chr18 24351525 24351774 -61637160 + MIR SINE MIR 8 249 -13 223 261 0 31 chr18 24353998 24354063 -61634871 + GA-rich Low_complexity Low_complexity 3 65 0 811 185 42 12 chr18 24354348 24354648 -61634286 + MER93b LTR ERV1 6 373 0 215 361 14 0 chr18 24355479 24355551 -61633383 + MIR SINE MIR 42 114 -94 416 296 107 12 chr18 24355688 24355857 -61633077 - MIR3 SINE MIR -9 199 15 420 259 52 7 chr18 24356075 24356210 -61632724 - MIR SINE MIR 0 262 122 634 272 174 10 chr18 24356268 24356665 -61632269 + LTR33A LTR ERVL 59 520 -3 3980 149 54 7 chr18 24357287 24358027 -61630907 - L1MB7 LINE L1 0 6184 5410 39 38 0 0 chr18 24358052 24358105 -61630829 + AT_rich Low_complexity Low_complexity 1 53 0 204 74 0 0 chr18 24358382 24358409 -61630525 - MIR SINE MIR -229 33 7 457 227 50 0 chr18 24358810 24358929 -61630005 - L2 LINE L2 -2 3311 3187 279 245 147 0 chr18 24358956 24359058 -61629876 + MLT1L LTR MaLR 339 455 -160 194 0 39 0 chr18 24359178 24359204 -61629730 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 247 265 0 0 chr18 24359779 24359828 -61629106 + L2 LINE L2 3204 3252 -61 386 281 67 15 chr18 24360638 24360773 -61628161 + MER69 DNA AcHobo 1 142 -1084 270 253 0 38 chr18 24361273 24361352 -61627582 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 278 336 112 0 chr18 24362198 24362305 -61626629 + L2 LINE L2 3154 3272 0 2200 153 40 19 chr18 24364529 24364954 -61623980 + Tigger2a DNA MER2_type 1 434 0 439 325 152 5 chr18 24365258 24365449 -61623485 - MIR SINE MIR -36 226 8 301 273 0 0 chr18 24365767 24365844 -61623090 + MER116 DNA Mariner 1 77 -3 1758 203 63 0 chr18 24366088 24366483 -61622451 + LTR40c LTR ERVL 34 453 -12 672 270 62 52 chr18 24367062 24367481 -61621453 - L1ME4a LINE L1 -230 5874 5452 324 253 0 22 chr18 24367770 24367861 -61621073 - L1ME4a LINE L1 -1107 5022 4934 260 324 142 90 chr18 24368599 24369009 -61619925 - L2 LINE L2 0 3272 2842 2088 105 29 4 chr18 24369686 24369963 -61618971 + AluSc SINE Alu 1 284 -25 22 35 0 0 chr18 24370192 24370221 -61618713 + AT_rich Low_complexity Low_complexity 1 29 0 2095 111 3 14 chr18 24370221 24370509 -61618425 + AluSx SINE Alu 1 285 -27 267 146 124 56 chr18 24370534 24370623 -61618311 - L1ME4a LINE L1 -19 6102 6008 309 268 79 57 chr18 24370629 24370857 -61618077 - L1ME4a LINE L1 -199 5922 5690 1711 176 0 24 chr18 24371180 24371470 -61617464 + AluJo SINE Alu 1 283 -29 627 172 81 70 chr18 24372958 24373043 -61615891 - MER53 DNA DNA -1 188 105 1752 98 30 34 chr18 24373043 24373197 -61615737 + L1PA16 LINE L1 5873 6027 -139 2551 101 13 19 chr18 24373197 24373574 -61615360 - THE1C LTR MaLR 0 375 1 1752 98 30 34 chr18 24373574 24373714 -61615220 + L1PA16 LINE L1 6027 6166 0 627 172 81 70 chr18 24373714 24373814 -61615120 - MER53 DNA DNA -84 105 1 320 293 78 63 chr18 24374203 24374394 -61614540 - L1ME4a LINE L1 -1315 4814 4621 24 53 0 0 chr18 24374566 24374604 -61614330 + AT_rich Low_complexity Low_complexity 1 38 0 1554 180 108 38 chr18 24374608 24375080 -61613854 + MLT1D LTR MaLR 1 505 0 2391 92 0 3 chr18 24375087 24375391 -61613543 - AluSg1 SINE Alu -6 303 1 911 304 92 31 chr18 24375513 24376769 -61612165 - L1ME4a LINE L1 -1993 4136 2792 600 179 30 30 chr18 24376769 24376937 -61611997 - L1MB8 LINE L1 -1 6177 6010 911 304 92 31 chr18 24376937 24377018 -61611916 - L1ME4a LINE L1 -3337 2792 2717 651 204 155 0 chr18 24377023 24377204 -61611730 - MER3 DNA MER1_type 0 209 1 393 267 75 46 chr18 24377309 24377549 -61611385 - L1ME4a LINE L1 -5309 810 564 333 315 42 61 chr18 24378034 24378199 -61610735 + MIR SINE MIR 2 163 -99 1077 294 94 0 chr18 24378427 24378808 -61610126 + MER115 DNA AcHobo 272 688 -5 296 277 22 88 chr18 24379349 24379486 -61609448 - MER5A DNA MER1_type -1 188 61 414 257 0 0 chr18 24382344 24382519 -61606415 + (TAGA)n Simple_repeat Simple_repeat 1 175 0 187 298 167 18 chr18 24382519 24382633 -61606301 - L2 LINE L2 -1730 1584 1454 351 0 0 0 chr18 24382643 24382682 -61606252 + (TAGG)n Simple_repeat Simple_repeat 1 39 0 21 36 0 0 chr18 24382942 24382970 -61605964 + AT_rich Low_complexity Low_complexity 1 28 0 202 300 35 65 chr18 24383353 24383553 -61605381 + L2 LINE L2 724 917 -2397 933 230 31 22 chr18 24384277 24384499 -61604435 + MER58A DNA MER1_type 1 224 0 670 288 16 5 chr18 24384642 24384826 -61604108 + MIR SINE MIR 7 192 -70 528 333 6 6 chr18 24385644 24385824 -61603110 + L3 LINE CR1 980 1159 -418 273 282 12 24 chr18 24385918 24386003 -61602931 + L3 LINE CR1 1346 1429 -148 2029 134 3 16 chr18 24386112 24386417 -61602517 + AluJb SINE Alu 1 301 -11 248 283 17 17 chr18 24386426 24386486 -61602448 + MIR SINE MIR 13 72 -190 358 57 0 19 chr18 24386498 24386551 -61602383 - MADE1 DNA Mariner -28 52 1 373 240 19 10 chr18 24386551 24386655 -61602279 + MIR SINE MIR 156 260 -2 210 71 0 0 chr18 24388929 24388957 -61599977 + (CAG)n Simple_repeat Simple_repeat 2 29 0 318 326 68 8 chr18 24389180 24389312 -61599622 - L1MC/D LINE L1 -2327 5481 5342 21 71 0 0 chr18 24389462 24389504 -61599430 + AT_rich Low_complexity Low_complexity 1 42 0 496 247 79 34 chr18 24389929 24390107 -61598827 - L2 LINE L2 -1 3312 3127 183 148 0 0 chr18 24392250 24392277 -61596657 + MIR3 SINE MIR 157 183 -25 1022 244 76 30 chr18 24392608 24393005 -61595929 - MLT1C LTR MaLR -4 463 49 300 269 120 9 chr18 24393078 24393186 -61595748 - L2 LINE L2 0 3313 3194 495 275 39 19 chr18 24395015 24395222 -61593712 + MER102b DNA MER1_type 103 313 -28 511 200 31 0 chr18 24396049 24396179 -61592755 + L1ME3A LINE L1 6034 6167 -3 1130 157 10 10 chr18 24396263 24396460 -61592474 - L1PA16 LINE L1 -3 6163 5967 242 344 54 0 chr18 24396460 24396553 -61592381 + L2 LINE L2 3174 3271 -1 1804 248 62 27 chr18 24397309 24397901 -61591033 + MLT1E2 LTR MaLR 14 626 0 495 266 54 35 chr18 24397948 24398151 -61590783 + MIR SINE MIR 46 252 -10 2319 101 3 0 chr18 24398204 24398511 -61590423 + AluSq SINE Alu 1 308 -5 1476 304 165 23 chr18 24398764 24399840 -61589094 + L2 LINE L2 1546 2774 -540 41144 48 1 3 chr18 24399845 24401690 -61587244 + L1PA5 LINE L1 1 1849 -4305 2268 103 3 0 chr18 24401690 24401992 -61586942 - AluY SINE Alu -8 303 1 41144 48 1 3 chr18 24401992 24406310 -61582624 + L1PA5 LINE L1 1849 6149 -5 209 363 44 18 chr18 24406560 24406673 -61582261 + L2 LINE L2 3180 3295 -18 361 294 136 42 chr18 24406708 24406922 -61582012 - L2 LINE L2 -208 3105 2872 980 246 104 20 chr18 24407135 24407590 -61581344 + MLT1E2 LTR MaLR 138 614 -12 586 246 124 16 chr18 24407916 24408275 -61580659 + MLT1H1 LTR MaLR 91 555 0 1656 150 56 46 chr18 24409016 24409322 -61579612 - AluJo SINE Alu -3 309 1 216 281 149 18 chr18 24409606 24409720 -61579214 + MIR3 SINE MIR 8 136 -72 400 220 10 10 chr18 24412046 24412146 -61576788 - LTR67 LTR ERVL 0 557 458 2018 118 30 7 chr18 24412169 24412473 -61576461 + AluSx SINE Alu 2 312 0 438 279 124 10 chr18 24412686 24412887 -61576047 - MLT1L LTR MaLR -182 433 210 975 312 85 43 chr18 24413791 24414063 -61574871 + L1MEc LINE L1 20 279 -6117 2359 136 3 0 chr18 24414063 24414438 -61574496 - L1PB1 LINE L1 -8 6143 5768 975 312 85 43 chr18 24414438 24415143 -61573791 + L1MEc LINE L1 279 1038 -5358 1760 235 28 21 chr18 24415147 24415187 -61573747 + L1MEc LINE L1 1118 1156 -5240 351 0 0 0 chr18 24415187 24415226 -61573708 + (CA)n Simple_repeat Simple_repeat 2 40 0 1760 235 28 21 chr18 24415226 24415495 -61573439 + L1MEc LINE L1 1156 1422 -4974 1953 148 7 3 chr18 24415495 24415785 -61573149 + AluSx SINE Alu 1 291 -21 1760 235 28 21 chr18 24415785 24416433 -61572501 + L1MEc LINE L1 1422 2148 -4248 310 310 10 30 chr18 24416805 24416905 -61572029 + L2 LINE L2 3157 3254 -18 195 186 0 0 chr18 24416905 24416948 -61571986 + GA-rich Low_complexity Low_complexity 2 44 0 454 235 150 20 chr18 24418578 24418731 -61570203 + L3 LINE CR1 1306 1478 -99 224 276 77 45 chr18 24419470 24419626 -61569308 + L2 LINE L2 2538 2698 -616 458 236 0 93 chr18 24419647 24419787 -61569147 + L2 LINE L2 3174 3300 -13 192 40 0 0 chr18 24420128 24420153 -61568781 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 322 315 163 14 chr18 24420377 24420596 -61568338 + MIR SINE MIR 6 262 0 857 233 140 24 chr18 24420712 24421219 -61567715 - MLT1E1 LTR MaLR -40 553 1 2154 108 3 0 chr18 24423580 24423875 -61565059 - AluSx SINE Alu -16 296 1 691 189 189 20 chr18 24424743 24424987 -61563947 - MER33 DNA MER1_type 0 324 40 521 328 25 20 chr18 24425093 24425291 -61563643 + MIR SINE MIR 47 245 -17 2126 67 102 3 chr18 24425295 24425578 -61563356 + AluY SINE Alu 1 311 0 297 345 8 34 chr18 24426792 24426911 -61562023 + MIR3 SINE MIR 66 181 -27 186 244 0 0 chr18 24427245 24427286 -61561648 + L2 LINE L2 3271 3311 -2 334 240 19 0 chr18 24427346 24427450 -61561484 + L1PA10 LINE L1 4 109 -5766 3607 209 28 57 chr18 24427483 24428851 -61560083 + L1PA10 LINE L1 714 2029 -4432 16695 128 14 8 chr18 24428851 24432384 -61556550 + L1PA10 LINE L1 2945 6469 -14 21 0 0 0 chr18 24432390 24432411 -61556523 + AT_rich Low_complexity Low_complexity 1 21 0 225 152 0 22 chr18 24432471 24432517 -61556417 - L1MA9 LINE L1 0 6312 6268 29 47 0 0 chr18 24432522 24432565 -61556369 + AT_rich Low_complexity Low_complexity 1 43 0 461 373 121 8 chr18 24433086 24433459 -61555475 + L3 LINE CR1 72 486 -1091 14362 167 33 21 chr18 24433521 24433718 -61555216 + L1MA8 LINE L1 3405 3598 -4112 207 0 0 0 chr18 24433718 24433741 -61555193 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 14362 167 33 21 chr18 24433741 24434383 -61554551 + L1MA8 LINE L1 3598 4230 -3480 2404 100 0 0 chr18 24434383 24434692 -61554242 - AluY SINE Alu -2 309 1 14362 167 33 21 chr18 24434692 24435103 -61553831 + L1MA8 LINE L1 4230 4634 -3076 2450 96 0 6 chr18 24435103 24435417 -61553517 + AluSx SINE Alu 1 312 0 14362 167 33 21 chr18 24435417 24435622 -61553312 + L1MA8 LINE L1 4634 4835 -2875 2477 141 34 10 chr18 24435622 24436040 -61552894 + MSTA LTR MaLR 1 428 0 14362 167 33 21 chr18 24436040 24436969 -61551965 + L1MA8 LINE L1 4835 5751 -1959 203 0 0 36 chr18 24436969 24436997 -61551937 + (TAAAA)n Simple_repeat Simple_repeat 3 29 0 14362 167 33 21 chr18 24436997 24438779 -61550155 + L1MA8 LINE L1 5751 7636 -74 446 255 0 0 chr18 24438869 24438963 -61549971 + L3 LINE CR1 631 724 -853 973 297 82 3 chr18 24438972 24439336 -61549598 - MLT1K LTR MaLR 0 588 196 1223 326 102 18 chr18 24439472 24440101 -61548833 + L3 LINE CR1 775 1456 -121 243 240 0 0 chr18 24443491 24443541 -61545393 - L2 LINE L2 0 3313 3264 418 276 66 83 chr18 24443607 24443842 -61545092 + MIR SINE MIR 34 262 0 188 401 64 17 chr18 24443854 24444026 -61544908 - L2 LINE L2 -86 3186 3007 1915 230 38 83 chr18 24444458 24445438 -61543496 - L1MEc LINE L1 -4259 2137 1202 1641 158 55 0 chr18 24445492 24445822 -61543112 - L1MA8 LINE L1 -25 6266 5919 1019 275 45 11 chr18 24445838 24446369 -61542565 - L1MEc LINE L1 -5215 1181 633 674 323 14 45 chr18 24446463 24446790 -61542144 - L1MEc LINE L1 -5953 443 130 2217 108 0 7 chr18 24446790 24447086 -61541848 + AluSg SINE Alu 1 294 -16 674 323 14 45 chr18 24447086 24447176 -61541758 - L1MEc LINE L1 -6266 130 39 794 275 88 125 chr18 24447302 24447972 -61540962 + L3 LINE CR1 540 1174 -403 1618 177 20 20 chr18 24447972 24448272 -61540662 + AluSx SINE Alu 1 300 -12 794 275 88 125 chr18 24448272 24448451 -61540483 + L3 LINE CR1 1174 1358 -219 2142 112 20 0 chr18 24448993 24449288 -61539646 - AluSg SINE Alu -9 301 1 2264 108 0 0 chr18 24449339 24449636 -61539298 + AluY SINE Alu 1 297 -14 242 241 25 25 chr18 24449656 24449735 -61539199 + L1MC5 LINE L1 7835 7913 -48 228 309 110 37 chr18 24450477 24450613 -61538321 + L2 LINE L2 3111 3256 -16 195 42 0 0 chr18 24450620 24450644 -61538290 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 25 0 0 0 chr18 24450760 24450785 -61538149 + AT_rich Low_complexity Low_complexity 1 25 0 252 310 53 26 chr18 24450844 24450957 -61537977 + MIR SINE MIR 32 147 -61 2388 99 0 0 chr18 24451524 24451828 -61537106 - AluSc SINE Alu -5 304 1 705 246 28 96 chr18 24451892 24452279 -61536655 + MLT1J LTR MaLR 100 460 -51 247 296 193 30 chr18 24452680 24452815 -61536119 + L2 LINE L2 3116 3272 0 2092 162 10 47 chr18 24454542 24454831 -61534103 - MLT1B LTR MaLR -4 386 115 2170 81 60 0 chr18 24454831 24455114 -61533820 - AluSp SINE Alu -13 300 1 2092 162 10 47 chr18 24455114 24455225 -61533709 - MLT1B LTR MaLR -275 115 1 396 228 7 117 chr18 24455269 24455414 -61533520 - MIR SINE MIR -62 146 18 574 260 17 17 chr18 24455796 24455977 -61532957 + Charlie7 DNA MER1_type 295 475 -2137 1213 94 12 6 chr18 24455977 24456147 -61532787 + AluSq SINE Alu 1 171 -142 1068 278 31 14 chr18 24456147 24456572 -61532362 - L1MEc LINE L1 -3086 3129 2698 478 264 96 12 chr18 24456609 24457027 -61531907 - L1MEc LINE L1 -3627 2588 2156 720 321 53 60 chr18 24457032 24457114 -61531820 - L1MEc LINE L1 -5146 1250 1169 1837 178 3 3 chr18 24457114 24457417 -61531517 - AluJb SINE Alu -9 303 1 720 321 53 60 chr18 24457417 24457804 -61531130 - L1MEc LINE L1 -5227 1169 784 36 62 0 0 chr18 24457914 24457978 -61530956 + AT_rich Low_complexity Low_complexity 1 64 0 14483 109 6 12 chr18 24458004 24461612 -61527322 + L1PA8 LINE L1 2545 6133 -39 23 0 0 0 chr18 24461612 24461635 -61527299 + AT_rich Low_complexity Low_complexity 1 23 0 46 78 0 0 chr18 24462207 24462309 -61526625 + AT_rich Low_complexity Low_complexity 1 102 0 255 286 52 50 chr18 24462309 24462516 -61526418 - MIR SINE MIR 0 262 1 1414 171 21 99 chr18 24462944 24463277 -61525657 - AluYb8 SINE Alu -11 307 1 2070 168 16 8 chr18 24465742 24466129 -61522805 - MLT1B LTR MaLR 0 390 1 501 255 14 21 chr18 24466381 24466522 -61522412 + MLT1I LTR MaLR 100 239 -170 253 201 47 38 chr18 24466511 24466617 -61522317 + MLT1I LTR MaLR 318 409 0 * 1770 92 8 0 chr18 24466892 24467142 -61521792 - L1PB1 LINE L1 0 6151 5900 303 318 36 0 chr18 24467367 24467477 -61521457 - MIR SINE MIR -25 237 124 316 304 81 63 chr18 24468328 24468660 -61520274 + L1ME3A LINE L1 760 1097 -5108 486 347 85 20 chr18 24468692 24469109 -61519825 + L1ME3A LINE L1 1131 1743 -833 642 233 204 4 chr18 24469164 24469443 -61519491 + MLT1I LTR MaLR 50 384 -25 2165 115 3 0 chr18 24469663 24469951 -61518983 + AluSx SINE Alu 1 289 -23 430 294 94 44 chr18 24470039 24470348 -61518586 + L1ME3A LINE L1 2103 2391 -3824 2261 127 37 5 chr18 24470348 24470726 -61518208 + MLT1B LTR MaLR 1 390 0 430 294 94 44 chr18 24470726 24470849 -61518085 + L1ME3A LINE L1 2391 2506 -3709 1046 309 110 42 chr18 24470851 24472100 -61516834 + L2 LINE L2 1823 3302 -11 579 287 185 19 chr18 24472572 24472994 -61515940 + L1ME3A LINE L1 2853 3344 -2871 741 282 82 38 chr18 24473368 24474103 -61514831 + L1ME3A LINE L1 5196 5953 -286 461 62 15 0 chr18 24474330 24474395 -61514539 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 7667 22 0 1 chr18 24474428 24475436 -61513498 + L1PA4 LINE L1 5146 6153 -2 239 311 45 63 chr18 24476544 24476766 -61512168 + L2 LINE L2 2836 3053 -219 191 216 0 0 chr18 24476864 24476901 -61512033 + L2 LINE L2 3215 3251 -21 22 0 0 0 chr18 24477422 24477444 -61511490 + AT_rich Low_complexity Low_complexity 1 22 0 730 284 62 47 chr18 24479988 24480411 -61508523 - L1MC4a LINE L1 -1786 6022 5594 641 263 11 0 chr18 24480424 24480599 -61508335 - L1MC4a LINE L1 -2177 5631 5455 234 191 64 0 chr18 24480839 24480886 -61508048 - L2 LINE L2 -4 3268 3219 638 220 12 35 chr18 24481416 24481589 -61507345 - MIR SINE MIR 0 262 94 793 181 0 8 chr18 24484156 24484283 -61504651 + FLAM_A SINE Alu 1 126 -7 22 56 0 0 chr18 24484363 24484399 -61504535 + AT_rich Low_complexity Low_complexity 1 36 0 463 346 57 49 chr18 24484443 24484713 -61504221 - L2 LINE L2 -10 3262 2987 1693 188 7 23 chr18 24484713 24485016 -61503918 + AluJb SINE Alu 4 301 -11 463 346 57 49 chr18 24485016 24485115 -61503819 - L2 LINE L2 -285 2987 2890 212 344 82 33 chr18 24485205 24485475 -61503459 - L2 LINE L2 -558 2756 2474 465 296 44 60 chr18 24485670 24485920 -61503014 - L2 LINE L2 -878 2436 2191 2152 93 0 55 chr18 24485979 24486289 -61502645 - AluSx SINE Alu -19 293 1 342 312 96 0 chr18 24486557 24486682 -61502252 - L2 LINE L2 -219 3053 2917 199 151 0 38 chr18 24488871 24488924 -61500010 + (TG)n Simple_repeat Simple_repeat 1 51 0 1828 204 111 29 chr18 24489133 24489679 -61499255 + MLT1E LTR MaLR 7 593 0 1756 161 11 3 chr18 24489718 24490004 -61498930 - AluJo SINE Alu -2 310 23 238 285 205 20 chr18 24490311 24490462 -61498472 + MIR SINE MIR 23 201 -61 252 86 0 0 chr18 24490726 24490761 -61498173 + (T)n Simple_repeat Simple_repeat 1 35 0 252 0 0 0 chr18 24490788 24490816 -61498118 + (G)n Simple_repeat Simple_repeat 1 28 0 2254 103 0 31 chr18 24490951 24491270 -61497664 - AluSc SINE Alu 0 309 1 2353 109 0 0 chr18 24491410 24491712 -61497222 + AluSx SINE Alu 1 302 -10 436 351 125 19 chr18 24491989 24492308 -61496626 + L3 LINE CR1 65 417 -1160 218 231 128 13 chr18 24492362 24492440 -61496494 + L3 LINE CR1 1203 1289 -288 1684 72 5 0 chr18 24492448 24492669 -61496265 + L1PA8 LINE L1 5948 6169 -3 1947 151 37 3 chr18 24492671 24493022 -61495912 + L1PA16 LINE L1 5769 6131 -35 435 242 24 79 chr18 24493185 24493350 -61495584 + L2 LINE L2 3158 3313 0 332 326 210 6 chr18 24493382 24493563 -61495371 + L3 LINE CR1 1341 1558 -19 239 292 106 0 chr18 24493640 24493753 -61495181 + L2 LINE L2 3186 3310 -3 279 356 30 15 chr18 24493766 24493901 -61495033 - MIR3 SINE MIR -14 194 58 230 254 11 119 chr18 24494826 24495011 -61493923 - L2 LINE L2 -222 3050 2886 350 329 88 47 chr18 24495066 24495473 -61493461 + L2 LINE L2 2550 2973 -341 208 238 0 0 chr18 24496906 24496948 -61491986 + (CA)n Simple_repeat Simple_repeat 1 42 0 302 327 39 19 chr18 24498447 24498603 -61490331 - MIR SINE MIR -46 216 58 2336 82 3 7 chr18 24500622 24500945 -61487989 - AluSp SINE Alu 0 313 1 22 56 0 0 chr18 24501037 24501073 -61487861 + AT_rich Low_complexity Low_complexity 1 36 0 232 267 133 0 chr18 24501223 24501313 -61487621 - MIR SINE MIR -66 142 41 2114 130 16 16 chr18 24502122 24502438 -61486496 - 7SLRNA srpRNA srpRNA -4 316 1 905 65 0 0 chr18 24503253 24503360 -61485574 + AluSq/x SINE Alu 1 107 -206 21 0 0 0 chr18 24503360 24503381 -61485553 + AT_rich Low_complexity Low_complexity 1 21 0 247 319 11 32 chr18 24503604 24503698 -61485236 + MIR3 SINE MIR 111 202 -6 250 341 79 0 chr18 24504517 24504643 -61484291 - L2 LINE L2 -11 3261 3126 284 351 34 0 chr18 24505825 24506064 -61482870 + L1MC4a LINE L1 4128 4374 -1772 357 343 46 19 chr18 24506188 24506404 -61482530 + L1MC4a LINE L1 4625 4846 -1300 239 253 89 34 chr18 24506456 24506602 -61482332 + L1MC4a LINE L1 4905 5058 -1088 448 294 85 25 chr18 24506636 24506837 -61482097 + L1MC4a LINE L1 5119 5331 -815 752 299 10 0 chr18 24506839 24507040 -61481894 - MIR SINE MIR -4 258 56 408 290 71 41 chr18 24507061 24507597 -61481337 + L1MC4a LINE L1 5339 5694 -427 810 277 27 51 chr18 24507625 24507807 -61481127 - L2 LINE L2 0 3313 3139 2065 206 115 40 chr18 24507807 24508388 -61480546 - MLT1E2 LTR MaLR 0 626 2 810 277 27 51 chr18 24508388 24508501 -61480433 - L2 LINE L2 -174 3139 3025 227 196 0 0 chr18 24509378 24509424 -61479510 + (TG)n Simple_repeat Simple_repeat 1 46 0 374 327 9 49 chr18 24509613 24509836 -61479098 + L2 LINE L2 2288 2501 -813 311 225 199 58 chr18 24510731 24511007 -61477927 - L2 LINE L2 -1 3312 2998 2041 199 89 21 chr18 24511086 24511523 -61477411 - MLT1C LTR MaLR 0 467 1 188 258 129 0 chr18 24511616 24511678 -61477256 + L2 LINE L2 3234 3303 -10 298 273 214 41 chr18 24512834 24513054 -61475880 - MIR SINE MIR 0 262 5 263 180 0 0 chr18 24513777 24513827 -61475107 - MER4-int LTR ERV1 -5438 1160 1111 38 0 0 0 chr18 24514696 24514734 -61474200 + AT_rich Low_complexity Low_complexity 1 38 0 394 188 119 63 chr18 24514895 24515090 -61473844 + MLT1H1 LTR MaLR 303 555 0 570 259 153 83 chr18 24515240 24515735 -61473199 + MLT1F LTR MaLR 4 533 -9 719 224 7 7 chr18 24516358 24516510 -61472424 + MIR SINE MIR 29 180 -82 1837 162 18 80 chr18 24516552 24516709 -61472225 + MLT1A1 LTR MaLR 1 166 -199 2674 123 20 0 chr18 24516709 24517109 -61471825 + L1MA5 LINE L1 5889 6296 -4 1837 162 18 80 chr18 24517109 24517340 -61471594 + MLT1A1 LTR MaLR 166 365 0 353 211 148 120 chr18 24518521 24518663 -61470271 - MIR SINE MIR -71 191 46 2957 167 9 67 chr18 24518841 24519494 -61469440 + L1MD3 LINE L1 6618 7277 -718 688 184 37 2 chr18 24519495 24519635 -61469299 + MLT1F1 LTR MaLR 1 143 -445 1763 159 4 4 chr18 24519639 24519915 -61469019 + AluJb SINE Alu 1 276 -36 414 0 0 0 chr18 24519918 24519964 -61468970 + (TC)n Simple_repeat Simple_repeat 1 46 0 270 0 0 0 chr18 24519963 24519993 -61468941 + (CA)n Simple_repeat Simple_repeat 1 30 0 * 2013 218 18 0 chr18 24519999 24520399 -61468535 + L1MD3 LINE L1 7416 7822 -173 1499 121 30 118 chr18 24520410 24520741 -61468193 + AluYb8 SINE Alu 1 302 -16 280 94 38 0 chr18 24521261 24521314 -61467620 + (TGAA)n Simple_repeat Simple_repeat 1 55 0 1579 208 11 0 chr18 24521634 24521943 -61466991 + AluJo SINE Alu 1 312 0 650 209 89 21 chr18 24523770 24523890 -61465044 + MIR SINE MIR 33 172 -90 2145 123 102 0 chr18 24523890 24524215 -61464719 + MER46B DNA MER2_type 4 236 0 650 209 89 21 chr18 24524215 24524285 -61464649 + MIR SINE MIR 172 236 -26 345 339 87 5 chr18 24527617 24527835 -61461099 - L3b LINE CR1 -199 1384 1149 205 220 11 99 chr18 24527861 24527952 -61460982 - MIR SINE MIR -26 236 154 207 250 19 0 chr18 24527953 24528005 -61460929 - L2 LINE L2 -14 3299 3247 1783 329 74 31 chr18 24528018 24528803 -61460131 - L3 LINE CR1 -751 826 8 28 0 0 0 chr18 24528915 24528943 -61459991 + AT_rich Low_complexity Low_complexity 1 28 0 634 244 40 35 chr18 24528981 24529182 -61459752 + MLT1J2 LTR MaLR 4 205 -245 234 304 0 0 chr18 24529292 24529348 -61459586 + MLT1J2 LTR MaLR 344 399 -51 304 279 23 0 chr18 24529354 24529440 -61459494 - L3 LINE CR1 -192 1385 1298 802 169 0 0 chr18 24529917 24530035 -61458899 - FLAM_C SINE Alu -15 118 1 506 29 15 0 chr18 24530062 24530130 -61458804 + (TAGA)n Simple_repeat Simple_repeat 2 70 0 363 241 70 70 chr18 24530191 24530419 -61458515 - L1MC4a LINE L1 -1882 5926 5699 315 308 112 14 chr18 24530424 24530567 -61458367 - L1MC4a LINE L1 -597 5569 5413 27 49 0 0 chr18 24530617 24530658 -61458276 + AT_rich Low_complexity Low_complexity 1 41 0 40 37 0 0 chr18 24530773 24530827 -61458107 + AT_rich Low_complexity Low_complexity 1 54 0 330 295 36 30 chr18 24530836 24531002 -61457932 - L2 LINE L2 -1 3312 3146 1104 216 21 22 chr18 24531955 24532215 -61456719 + MIR SINE MIR 4 262 0 447 264 196 0 chr18 24532483 24532646 -61456288 + L2 LINE L2 2977 3171 -142 7348 124 39 38 chr18 24532722 24533684 -61455250 + Tigger3b DNA MER2_type 1 966 -2062 1977 115 39 0 chr18 24533684 24533970 -61454964 - AluSq SINE Alu -11 302 6 7348 124 39 38 chr18 24533970 24534236 -61454698 + Tigger3b DNA MER2_type 966 1230 -1 499 270 167 35 chr18 24534250 24534561 -61454373 + L2 LINE L2 2961 3312 -1 214 343 9 0 chr18 24534627 24534732 -61454202 + L2 LINE L2 2948 3053 -219 1505 273 23 49 chr18 24534745 24535257 -61453677 + MLT1J LTR MaLR 13 511 0 605 260 157 18 chr18 24535351 24535574 -61453360 - MIR SINE MIR 0 262 9 258 261 87 26 chr18 24535580 24535695 -61453239 + L2 LINE L2 3132 3253 -19 273 119 0 0 chr18 24535697 24535739 -61453195 + (TGAG)n Simple_repeat Simple_repeat 1 42 0 754 235 217 19 chr18 24535867 24536241 -61452693 - LTR16A1 LTR ERVL 0 457 10 305 102 17 0 chr18 24536538 24536597 -61452337 + (TG)n Simple_repeat Simple_repeat 2 61 0 702 55 0 0 chr18 24537157 24537248 -61451686 + (TC)n Simple_repeat Simple_repeat 1 91 0 417 171 50 10 chr18 24539083 24539183 -61449751 + MIR SINE MIR 70 177 -31 216 211 26 105 chr18 24539276 24539352 -61449582 + L2 LINE L2 3203 3272 0 1911 153 6 25 chr18 24539554 24539868 -61449066 - AluJo SINE Alu 0 312 5 469 292 88 28 chr18 24540156 24540372 -61448562 + MIR SINE MIR 10 238 -24 1334 143 76 0 chr18 24540848 24541058 -61447876 - MER7A DNA MER2_type -122 224 1 3005 110 7 0 chr18 24542238 24542664 -61446270 + L1MA5A LINE L1 5859 6287 -10 2162 274 66 10 chr18 24542706 24543630 -61445304 - L1M4 LINE L1 -2544 3602 2627 840 249 21 5 chr18 24545420 24545609 -61443325 - MER58A DNA MER1_type -6 218 27 271 373 51 17 chr18 24545686 24545922 -61443012 + L2 LINE L2 2578 2821 -493 331 287 102 0 chr18 24546074 24546182 -61442752 - MLT1J2 LTR MaLR -59 391 273 184 356 78 26 chr18 24546411 24546526 -61442408 + L2 LINE L2 2934 3054 -218 665 205 5 117 chr18 24548466 24548537 -61440397 + MER5A DNA MER1_type 3 80 -109 1691 113 4 4 chr18 24548537 24548776 -61440158 + AluSx SINE Alu 61 299 -13 665 205 5 117 chr18 24548776 24548909 -61440025 + MER5A DNA MER1_type 80 184 -5 907 232 6 0 chr18 24549296 24549477 -61439457 + MER58A DNA MER1_type 27 208 -16 2068 135 7 0 chr18 24549716 24550019 -61438915 + AluSx SINE Alu 1 305 -7 195 238 48 16 chr18 24551117 24551180 -61437754 - MIR SINE MIR -90 172 108 1275 156 30 0 chr18 24551273 24551472 -61437462 - AluJo SINE Alu -3 309 105 360 62 0 0 chr18 24551472 24551512 -61437422 - L1PA5 LINE L1 -293 5861 5819 1325 13 66 0 chr18 24551512 24551663 -61437271 + L1PA5 LINE L1 5989 6150 -4 733 205 0 0 chr18 24551685 24551802 -61437132 - AluJo SINE Alu -185 117 1 552 273 68 64 chr18 24551809 24552179 -61436755 + MLT1H LTR MaLR 116 549 0 315 298 117 11 chr18 24552179 24552273 -61436661 - MIR SINE MIR -158 104 1 279 232 30 10 chr18 24552627 24552726 -61436208 + T-rich Low_complexity Low_complexity 3 103 0 2168 116 7 0 chr18 24553314 24553615 -61435319 - AluSx SINE Alu -9 303 1 414 0 0 0 chr18 24553671 24553717 -61435217 + (CA)n Simple_repeat Simple_repeat 2 47 0 216 111 0 0 chr18 24553717 24553753 -61435181 + (TC)n Simple_repeat Simple_repeat 1 36 0 2197 125 0 0 chr18 24554912 24555209 -61433725 + AluSx SINE Alu 1 297 -15 24 0 0 0 chr18 24555209 24555233 -61433701 + AT_rich Low_complexity Low_complexity 1 24 0 869 198 261 8 chr18 24557445 24557551 -61431383 + Tigger7 DNA MER2_type 1 79 -2408 2350 83 0 35 chr18 24557551 24557865 -61431069 + AluY SINE Alu 1 303 -8 869 198 261 8 chr18 24557865 24557996 -61430938 + Tigger7 DNA MER2_type 79 298 -2189 * 2126 151 34 6 chr18 24557993 24558350 -61430584 + Tigger7 DNA MER2_type 2121 2487 0 1067 246 114 18 chr18 24558688 24559029 -61429905 - MLT1J2 LTR MaLR 0 450 77 2570 136 43 14 chr18 24559544 24559964 -61428970 + MSTB1 LTR MaLR 1 432 0 219 36 0 0 chr18 24561469 24561497 -61427437 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 22 0 0 0 chr18 24561757 24561779 -61427155 + AT_rich Low_complexity Low_complexity 1 22 0 186 103 0 0 chr18 24562247 24562276 -61426658 + (GA)n Simple_repeat Simple_repeat 2 30 0 2503 112 42 68 chr18 24563897 24564354 -61424580 + L1PA16 LINE L1 5721 6165 -1 832 343 89 25 chr18 24564494 24564598 -61424336 - L2 LINE L2 -19 3253 3157 243 0 0 0 chr18 24564598 24564625 -61424309 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 832 343 89 25 chr18 24564625 24565358 -61423576 - L2 LINE L2 -115 3157 2355 289 267 153 28 chr18 24565370 24565722 -61423212 + L1ME4a LINE L1 5712 6107 -14 1783 180 17 0 chr18 24565766 24566061 -61422873 + AluJo SINE Alu 2 301 -11 233 359 22 22 chr18 24566227 24566319 -61422615 - MIR SINE MIR -97 111 20 247 225 0 113 chr18 24566649 24566729 -61422205 - MER2 DNA MER2_type 0 345 275 920 168 36 0 chr18 24566821 24566988 -61421946 - MER2 DNA MER2_type -172 173 1 253 272 97 18 chr18 24567106 24567220 -61421714 - MIR SINE MIR -6 256 134 * 809 221 9 42 chr18 24567219 24567436 -61421498 - L2 LINE L2 0 3313 3104 227 260 39 42 chr18 24567480 24567577 -61421357 - MIR SINE MIR -114 94 2 21707 122 27 10 chr18 24568127 24571629 -61417305 + L1MA3 LINE L1 14 3575 -3990 13197 172 43 7 chr18 24571620 24572760 -61416174 + L1MA3 LINE L1 3897 4995 -2570 * 2300 92 17 0 chr18 24572760 24573055 -61415879 - AluSp SINE Alu -13 300 1 13197 172 43 7 chr18 24573055 24574714 -61414220 + L1MA3 LINE L1 4995 6796 -769 3428 93 4 35 chr18 24574716 24575262 -61413672 + L1MA3 LINE L1 7196 7724 0 2029 147 0 0 chr18 24575462 24575755 -61413179 - AluSx SINE Alu -19 293 1 25 65 0 0 chr18 24578291 24578337 -61410597 + AT_rich Low_complexity Low_complexity 1 46 0 2227 117 0 0 chr18 24578417 24578725 -61410209 - AluSq SINE Alu -5 308 1 240 379 85 29 chr18 24578816 24579088 -61409846 + L2 LINE L2 2809 3095 -177 349 217 130 0 chr18 24579188 24579280 -61409654 - MIR SINE MIR -49 213 110 1298 155 15 53 chr18 24579742 24580007 -61408927 - AluJb SINE Alu -9 303 49 681 310 48 9 chr18 24581608 24581943 -61406991 - L1MC4a LINE L1 -1901 5907 5560 202 170 64 0 chr18 24581979 24582026 -61406908 - MIR3 SINE MIR -9 199 150 22 70 0 0 chr18 24582056 24582099 -61406835 + AT_rich Low_complexity Low_complexity 1 43 0 1705 70 18 0 chr18 24582178 24582406 -61406528 - L1PA7 LINE L1 -2 6152 5921 1078 195 124 9 chr18 24582872 24583211 -61405723 - MLT1G LTR MaLR 0 530 156 352 279 137 98 chr18 24583216 24583383 -61405551 + L1ME LINE L1 12 171 -6776 2147 142 0 0 chr18 24583383 24583693 -61405241 + AluSx SINE Alu 1 310 -2 352 279 137 98 chr18 24583693 24583955 -61404979 + L1ME LINE L1 171 1334 -5613 182 286 0 0 chr18 24584204 24584260 -61404674 - MIR SINE MIR -29 233 178 389 79 0 32 chr18 24584266 24584329 -61404605 + MADE1 DNA Mariner 1 61 -19 228 150 50 0 chr18 24584530 24584590 -61404344 + (TA)n Simple_repeat Simple_repeat 1 63 0 1432 240 115 23 chr18 24584791 24585310 -61403624 + MLT1E2 LTR MaLR 1 552 -74 1072 180 0 0 chr18 24585311 24585478 -61403456 + AluSg/x SINE Alu 131 297 -13 230 163 0 41 chr18 24585537 24585586 -61403348 + MLT1A2 LTR MaLR 1 47 -327 2478 82 0 16 chr18 24585819 24586134 -61402800 - AluSg SINE Alu 0 310 1 664 208 18 151 chr18 24586212 24586459 -61402475 + MLT1A2 LTR MaLR 173 505 0 197 179 26 0 chr18 24586469 24586508 -61402426 - MIR SINE MIR -104 158 119 4226 195 18 16 chr18 24586524 24586991 -61401943 + L1MB2 LINE L1 4858 5323 -848 2317 114 0 0 chr18 24586991 24587297 -61401637 + AluSq SINE Alu 1 306 -7 4226 195 18 16 chr18 24587297 24588131 -61400803 + L1MB2 LINE L1 5323 6163 -8 214 224 59 0 chr18 24588676 24588761 -61400173 + (TA)n Simple_repeat Simple_repeat 2 91 0 747 197 0 0 chr18 24588769 24588901 -61400033 - MER7A DNA MER2_type 0 336 205 1077 122 83 0 chr18 24589152 24589333 -61399601 - MER7A DNA MER2_type -152 194 1 807 202 42 6 chr18 24589343 24589511 -61399423 - MSTD LTR MaLR 0 396 223 385 241 37 9 chr18 24589520 24589628 -61399306 - MSTD LTR MaLR -254 111 1 9577 215 47 39 chr18 24589677 24590558 -61398376 - L1MB7 LINE L1 -9 6986 6113 1628 171 3 29 chr18 24590558 24590867 -61398067 - AluJo SINE Alu -11 301 1 9577 215 47 39 chr18 24590867 24592426 -61396508 - L1MB7 LINE L1 -882 6113 4568 2295 57 0 4 chr18 24592426 24592744 -61396190 - AluY SINE Alu 0 317 1 9577 215 47 39 chr18 24592744 24594808 -61394126 - L1MB7 LINE L1 -2427 4568 2479 1158 149 0 0 chr18 24594826 24594987 -61393947 + FRAM SINE Alu 1 158 -18 3084 228 55 22 chr18 24595185 24596114 -61392820 - L1MB7 LINE L1 -5665 1194 166 991 124 248 19 chr18 24596114 24596343 -61392591 - AluSg1 SINE Alu 0 309 35 590 161 60 89 chr18 24596345 24596456 -61392478 - L1MB7 LINE L1 -6686 173 67 2314 89 3 0 chr18 24596456 24596749 -61392185 + AluSp SINE Alu 1 294 -19 590 161 60 89 chr18 24596749 24596805 -61392129 - L1MB7 LINE L1 -6792 67 11 348 303 164 0 chr18 24596885 24597007 -61391927 + MER91A DNA MER1_type 25 166 -30 230 228 53 0 chr18 24597007 24597064 -61391870 + MER91A DNA MER1_type 135 194 -2 869 214 6 6 chr18 24597121 24597299 -61391635 + MER5B DNA MER1_type 1 178 0 287 272 185 12 chr18 24598272 24598420 -61390514 + MIR SINE MIR 31 191 -34 1092 188 138 109 chr18 24598463 24599012 -61389922 - MER34B LTR ERV1 0 565 1 384 59 0 0 chr18 24599027 24599078 -61389856 + (CA)n Simple_repeat Simple_repeat 1 51 0 2563 92 19 8 chr18 24599231 24599601 -61389333 - THE1C LTR MaLR -1 374 1 181 292 150 35 chr18 24600376 24600489 -61388445 - MIR SINE MIR -102 160 35 2135 167 77 7 chr18 24600689 24601120 -61387814 + LOR1b LTR ERV1 1 461 0 21 36 0 0 chr18 24601510 24601538 -61387396 + AT_rich Low_complexity Low_complexity 1 28 0 398 310 190 0 chr18 24601629 24601855 -61387079 + L2 LINE L2 2245 2513 -801 409 276 79 0 chr18 24601920 24602072 -61386862 + MER103 DNA DNA 3 166 0 2111 122 0 0 chr18 24602715 24603010 -61385924 - AluSx SINE Alu -17 295 1 262 105 0 0 chr18 24603106 24603144 -61385790 - tRNA-Ile-ATT tRNA tRNA -39 38 1 496 339 63 37 chr18 24603181 24603612 -61385322 + L1M4 LINE L1 4861 5302 -844 677 171 47 16 chr18 24603718 24603847 -61385087 - FLAM_A SINE Alu 0 133 1 234 226 19 0 chr18 24604296 24604349 -61384585 + GA-rich Low_complexity Low_complexity 4 57 0 286 288 86 7 chr18 24604503 24604642 -61384292 - MLT1L LTR MaLR 0 615 466 203 275 29 29 chr18 24604871 24604940 -61383994 + L2 LINE L2 3197 3265 -7 330 322 0 0 chr18 24606464 24606579 -61382355 + MER34 LTR ERV1 1 115 -427 1873 136 65 7 chr18 24606614 24606908 -61382026 + AluSx SINE Alu 1 311 -1 1722 148 41 10 chr18 24610017 24610308 -61378626 - AluJo SINE Alu -12 300 1 297 254 0 0 chr18 24610308 24610375 -61378559 + Tigger7 DNA MER2_type 14 80 -2407 * 390 105 0 0 chr18 24610372 24610429 -61378505 - Tigger7 DNA MER2_type -386 347 291 * 1397 111 74 16 chr18 24610426 24610600 -61378334 + Tigger7 DNA MER2_type 2234 2427 -64 1190 153 63 5 chr18 24610600 24610822 -61378112 + MER46A DNA MER2_type 2 236 0 1397 111 74 16 chr18 24610822 24610890 -61378044 + Tigger7 DNA MER2_type 2427 2490 -1 2210 96 3 7 chr18 24611160 24611492 -61377442 + AluSq SINE Alu 1 290 -23 227 139 0 47 chr18 24611410 24611444 -61377490 + Alu SINE Alu 249 293 -7 330 0 0 24 chr18 24611444 24611486 -61377448 + (TAAA)n Simple_repeat Simple_repeat 2 172 0 271 311 24 61 chr18 24611826 24611990 -61376944 - L2 LINE L2 -419 2895 2738 349 308 94 37 chr18 24612026 24612334 -61376600 - L2 LINE L2 -1212 2102 1783 1970 117 55 7 chr18 24612552 24612842 -61376092 + AluSx SINE Alu 1 304 -8 226 186 58 23 chr18 24614554 24614640 -61374294 + L1MCa LINE L1 1996 2084 -4342 1424 245 74 39 chr18 24614734 24614757 -61374177 - L1ME4a LINE L1 -49 6072 6051 1846 157 0 3 chr18 24614757 24615043 -61373891 - AluSx SINE Alu -27 285 1 1424 245 74 39 chr18 24615043 24615603 -61373331 - L1ME4a LINE L1 -70 6051 5469 7118 110 6 20 chr18 24617516 24618216 -61370718 - L1MA4A LINE L1 -6 6297 5617 2234 113 3 0 chr18 24618216 24618517 -61370417 - AluSq SINE Alu -11 302 1 7118 110 6 20 chr18 24618517 24618971 -61369963 - L1MA4A LINE L1 -686 5617 5158 189 0 0 0 chr18 24618987 24619008 -61369926 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 1905 151 0 0 chr18 24619008 24619286 -61369648 - AluSx SINE Alu -32 280 3 490 282 74 40 chr18 24619441 24619943 -61368991 + MLT1H LTR MaLR 1 549 0 6914 129 11 40 chr18 24620145 24622088 -61366846 - L1PA11 LINE L1 -4 6170 4255 477 188 67 48 chr18 24622161 24622326 -61366608 + Charlie5 DNA MER1_type 2418 2585 -27 1671 212 110 84 chr18 24622462 24623090 -61365844 - LTR48B LTR ERV1 0 644 1 4122 193 70 90 chr18 24623274 24624910 -61364024 - LTR48B-int LTR ERV1 -1359 4972 1956 878 252 19 19 chr18 24624946 24625160 -61363774 - LTR48B-int LTR ERV1 -4210 2121 1908 906 177 0 0 chr18 24625222 24625369 -61363565 - LTR48B-int LTR ERV1 -5343 988 842 2157 220 41 37 chr18 24625384 24625515 -61363419 - LTR48B-int LTR ERV1 -4496 1450 1321 2209 113 0 0 chr18 24625515 24625806 -61363128 + AluSg SINE Alu 1 291 -19 2157 220 41 37 chr18 24625806 24626236 -61362698 - LTR48B-int LTR ERV1 -4625 1321 358 345 290 10 30 chr18 24626248 24626348 -61362586 - LTR48B-int LTR ERV1 -4618 1328 1231 * 1272 234 28 50 chr18 24626326 24626685 -61362249 - LTR48B-int LTR ERV1 -5980 351 1 464 165 88 0 chr18 24626690 24626781 -61362153 - LTR48B LTR ERV1 -3 784 686 1249 150 0 0 chr18 24626804 24626984 -61361950 - AluJb SINE Alu -28 284 105 1044 229 39 36 chr18 24627086 24627391 -61361543 + LTR9 LTR ERV1 307 612 0 576 165 66 0 chr18 24627391 24627482 -61361452 - AluJb SINE Alu -215 97 1 1372 207 73 66 chr18 24627502 24628036 -61360898 - LTR48B LTR ERV1 -91 696 12 1859 164 0 3 chr18 24628296 24628601 -61360333 + AluJb SINE Alu 1 304 -8 2062 138 6 6 chr18 24628809 24629121 -61359813 - AluSx SINE Alu 0 312 1 39 60 0 0 chr18 24629492 24629559 -61359375 + AT_rich Low_complexity Low_complexity 1 67 0 293 191 0 0 chr18 24630521 24630568 -61358366 + polypurine Low_complexity Low_complexity 2 48 0 841 97 34 23 chr18 24630568 24630744 -61358190 + GA-rich Low_complexity Low_complexity 3 180 0 1374 161 0 14 chr18 24631237 24631460 -61357474 + AluJb SINE Alu 86 305 -7 2217 157 3 6 chr18 24632197 24632553 -61356381 + MER47A DNA MER2_type 12 366 0 289 311 78 44 chr18 24632730 24632910 -61356024 + L2 LINE L2 3127 3312 -1 2280 153 40 3 chr18 24632931 24633283 -61355651 - MLT1A1 LTR MaLR 0 365 1 317 263 81 16 chr18 24633612 24633846 -61355088 + L1ME LINE L1 5226 5474 -696 226 273 45 81 chr18 24633930 24633987 -61354947 + L1ME LINE L1 5615 5672 -449 2529 61 0 16 chr18 24633987 24634298 -61354636 + AluY SINE Alu 1 306 -5 226 273 45 81 chr18 24634298 24634333 -61354601 + L1ME LINE L1 5672 5707 -414 2191 158 92 22 chr18 24634333 24634733 -61354201 - MSTA LTR MaLR 0 428 1 226 273 45 81 chr18 24634733 24634837 -61354097 + L1ME LINE L1 5707 5805 -316 202 150 0 25 chr18 24634853 24634893 -61354041 + (TAA)n Simple_repeat Simple_repeat 2 40 0 1081 192 58 72 chr18 24636349 24636625 -61352309 - MLT2D LTR ERVL 0 414 143 2041 112 44 3 chr18 24636790 24637085 -61351849 - AluSx SINE Alu -5 307 1 578 208 0 24 chr18 24637403 24637528 -61351406 - MLT2D LTR ERVL -289 125 4 1159 142 11 0 chr18 24637598 24637774 -61351160 + AluJb SINE Alu 135 312 0 1677 293 75 38 chr18 24637900 24638412 -61350522 + MER115 DNA AcHobo 33 575 -118 3669 165 62 9 chr18 24638412 24639086 -61349848 - MER67C LTR ERV1 0 710 1 1677 293 75 38 chr18 24639086 24639209 -61349725 + MER115 DNA AcHobo 575 692 -1 22 0 0 0 chr18 24639253 24639275 -61349659 + AT_rich Low_complexity Low_complexity 1 22 0 418 326 30 15 chr18 24639623 24639758 -61349176 + MIR3 SINE MIR 34 170 -38 204 158 0 0 chr18 24640563 24640601 -61348333 + T-rich Low_complexity Low_complexity 1 38 0 801 136 45 0 chr18 24640623 24640755 -61348179 - MSTB LTR MaLR -80 346 209 386 293 49 24 chr18 24640766 24640889 -61348045 - MIR SINE MIR -64 144 19 243 0 0 0 chr18 24641424 24641451 -61347483 + (TC)n Simple_repeat Simple_repeat 1 27 0 * 324 70 0 0 chr18 24641450 24641493 -61347441 + (CA)n Simple_repeat Simple_repeat 1 43 0 397 295 68 28 chr18 24641864 24642168 -61346766 - MLT1L LTR MaLR -153 462 116 522 243 148 91 chr18 24642193 24642219 -61346715 - MLT1H LTR MaLR -5 544 521 3597 135 63 42 chr18 24642219 24642840 -61346094 - MER51A LTR ERV1 0 634 1 522 243 148 91 chr18 24642840 24643253 -61345681 - MLT1H LTR MaLR -28 521 80 262 272 0 37 chr18 24643307 24643388 -61345546 - MLT1L LTR MaLR -522 93 16 2040 128 0 0 chr18 24643581 24643885 -61345049 + AluSq SINE Alu 1 304 0 213 309 72 39 chr18 24643896 24644048 -61344886 - MIR3 SINE MIR -23 185 30 641 280 50 0 chr18 24644152 24644352 -61344582 + MLT1J LTR MaLR 1 210 -301 318 317 138 0 chr18 24644954 24645077 -61343857 - L2 LINE L2 0 3272 3133 272 358 66 48 chr18 24646916 24647251 -61341683 + L2 LINE L2 2923 3263 -9 31 26 0 0 chr18 24649383 24649421 -61339513 + AT_rich Low_complexity Low_complexity 1 38 0 303 28 0 0 chr18 24649706 24649742 -61339192 + (TA)n Simple_repeat Simple_repeat 2 37 0 2260 177 57 46 chr18 24650345 24650886 -61338048 + L1MC4 LINE L1 7496 8042 0 26 50 0 0 chr18 24650890 24650930 -61338004 + AT_rich Low_complexity Low_complexity 1 40 0 1722 178 0 30 chr18 24652112 24652415 -61336519 - AluJo SINE Alu -18 294 1 23 0 0 0 chr18 24652488 24652511 -61336423 + AT_rich Low_complexity Low_complexity 1 23 0 2559 69 0 3 chr18 24653396 24653701 -61335233 + AluY SINE Alu 1 304 -7 1998 175 16 16 chr18 24653762 24654127 -61334807 + MLT1A1 LTR MaLR 1 365 0 266 223 54 98 chr18 24655089 24655134 -61333800 - MIR3 SINE MIR -21 187 142 1764 200 121 47 chr18 24655134 24655199 -61333735 - MLT1D LTR MaLR 0 505 446 2176 134 13 0 chr18 24655199 24655504 -61333430 + AluSx SINE Alu 1 309 -3 1764 200 121 47 chr18 24655504 24655908 -61333026 - MLT1D LTR MaLR -59 446 1 266 223 54 98 chr18 24655908 24655974 -61332960 - MIR3 SINE MIR -66 142 81 1352 7 0 0 chr18 24655975 24656120 -61332814 + AluY SINE Alu 155 299 -12 392 267 173 84 chr18 24656327 24656548 -61332386 - L1ME LINE L1 -299 5822 5622 2170 101 0 4 chr18 24656548 24656826 -61332108 - AluSg SINE Alu -33 277 1 392 267 173 84 chr18 24656826 24657102 -61331832 - L1ME LINE L1 -499 5622 5309 21 0 0 0 chr18 24657198 24657219 -61331715 + AT_rich Low_complexity Low_complexity 1 21 0 4600 85 0 0 chr18 24657477 24658031 -61330903 - MER41A LTR ERV1 0 554 1 507 170 85 71 chr18 24658321 24658462 -61330472 - L1MB1 LINE L1 -16 6152 6010 337 30 0 24 chr18 24658463 24658515 -61330419 + L1MB1 LINE L1 5992 6041 -130 376 260 42 10 chr18 24658633 24658729 -61330205 - MIR SINE MIR -85 123 25 4426 73 14 25 chr18 24658731 24659172 -61329762 + MER41A LTR ERV1 1 437 -117 1925 117 18 0 chr18 24659172 24659476 -61329458 - AluSg SINE Alu 0 309 1 4426 73 14 25 chr18 24659476 24659593 -61329341 + MER41A LTR ERV1 437 554 0 4501 78 7 26 chr18 24659597 24659629 -61329305 + MER41A LTR ERV1 1 32 -522 2296 108 3 0 chr18 24659629 24659936 -61328998 - AluY SINE Alu -3 308 1 4501 78 7 26 chr18 24659936 24660468 -61328466 + MER41A LTR ERV1 32 554 0 189 0 0 0 chr18 24660799 24660820 -61328114 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1994 132 0 4 chr18 24660822 24661102 -61327832 - AluSx SINE Alu -33 279 1 352 125 18 0 chr18 24661108 24661164 -61327770 - MER5A DNA MER1_type -120 69 13 209 263 0 0 chr18 24661832 24661889 -61327045 + T-rich Low_complexity Low_complexity 3 59 0 1994 104 0 11 chr18 24662024 24662293 -61326641 + AluSx SINE Alu 31 296 -16 2185 109 3 3 chr18 24662526 24662830 -61326104 + AluSg SINE Alu 1 304 -6 234 150 0 0 chr18 24663780 24663820 -61325114 + (A)n Simple_repeat Simple_repeat 1 40 0 517 286 149 6 chr18 24664182 24664343 -61324591 + MER5A DNA MER1_type 4 187 -2 1822 130 0 0 chr18 24664775 24665036 -61323898 - AluSx SINE Alu -7 305 45 512 172 30 20 chr18 24665059 24665158 -61323776 - AluS SINE Alu -212 101 2 2001 93 83 14 chr18 24665505 24665794 -61323140 + AluSc SINE Alu 1 309 0 759 176 81 14 chr18 24668893 24669041 -61319893 - FRAM SINE Alu -8 158 1 2273 96 0 0 chr18 24669075 24669368 -61319566 + AluSc SINE Alu 1 293 -16 228 184 0 0 chr18 24669524 24669573 -61319361 + (CA)n Simple_repeat Simple_repeat 1 49 0 334 215 13 51 chr18 24669700 24669779 -61319155 + L2 LINE L2 3238 3313 0 432 97 0 0 chr18 24670164 24670226 -61318708 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 192 331 142 21 chr18 24670374 24670655 -61318279 + L2 LINE L2 2198 2512 -802 354 241 25 0 chr18 24670712 24670791 -61318143 + MIR SINE MIR 81 161 -101 212 319 101 0 chr18 24670849 24670918 -61318016 - L2 LINE L2 -36 3277 3202 2167 117 0 0 chr18 24671177 24671467 -61317467 + AluSx SINE Alu 1 290 -22 433 261 25 42 chr18 24671497 24671616 -61317318 - L2 LINE L2 -9 3304 3188 247 264 27 36 chr18 24671885 24671995 -61316939 + L2 LINE L2 2837 2945 -327 249 302 23 12 chr18 24671998 24672084 -61316850 - MIR SINE MIR -6 256 170 221 303 0 15 chr18 24672653 24672719 -61316215 - MIR SINE MIR -122 140 76 300 300 50 10 chr18 24672754 24672854 -61316080 + L2 LINE L2 2945 3048 -224 1965 136 10 10 chr18 24672986 24673294 -61315640 + AluSx SINE Alu 1 308 -4 432 0 0 0 chr18 24673301 24673349 -61315585 + (GGAA)n Simple_repeat Simple_repeat 3 50 0 540 111 0 0 chr18 24673390 24673471 -61315463 + (GAAA)n Simple_repeat Simple_repeat 1 81 0 841 106 28 0 chr18 24673518 24673660 -61315274 + GA-rich Low_complexity Low_complexity 3 148 0 195 202 119 36 chr18 24673743 24673827 -61315107 - MIR SINE MIR -74 188 98 2045 129 31 0 chr18 24675608 24675902 -61313032 + AluSg SINE Alu 1 303 -7 1916 151 13 0 chr18 24677382 24677681 -61311253 + AluSx SINE Alu 1 303 -9 238 254 100 18 chr18 24677933 24678043 -61310891 - MLT1H LTR MaLR -350 199 81 1893 157 6 13 chr18 24678305 24678618 -61310316 + AluSx SINE Alu 1 311 -1 811 259 40 84 chr18 24679120 24679528 -61309406 + L1ME4a LINE L1 5507 5879 -242 1733 181 3 3 chr18 24679528 24679821 -61309113 - AluJo SINE Alu -19 293 1 811 259 40 84 chr18 24679821 24680044 -61308890 + L1ME4a LINE L1 5879 6110 -11 1197 90 0 0 chr18 24680130 24680286 -61308648 + AluY SINE Alu 151 306 -5 2113 188 27 2 chr18 24681096 24681501 -61307433 + MER63 DNA MER1_type 621 1035 -25 2259 68 4 0 chr18 24681678 24681958 -61306976 - AluSg SINE Alu -14 296 16 506 325 113 14 chr18 24682799 24683144 -61305790 + L2 LINE L2 1963 2341 -973 2175 214 36 28 chr18 24683181 24683759 -61305175 + L1ME1 LINE L1 5579 6161 -5 757 155 0 0 chr18 24684112 24684228 -61304706 + FLAM_C SINE Alu 1 116 -27 1029 257 98 57 chr18 24684538 24684698 -61304236 - L2 LINE L2 0 3313 3161 189 0 0 0 chr18 24684698 24684719 -61304215 + (TG)n Simple_repeat Simple_repeat 2 22 0 1029 257 98 57 chr18 24684719 24684978 -61303956 - L2 LINE L2 -152 3161 2877 412 254 32 8 chr18 24685151 24685277 -61303657 + L1ME4a LINE L1 5976 6104 -17 22 56 0 0 chr18 24685319 24685355 -61303579 + AT_rich Low_complexity Low_complexity 1 36 0 403 231 208 38 chr18 24685597 24685781 -61303153 + L1ME LINE L1 5257 5474 -690 1489 187 10 7 chr18 24685797 24686086 -61302848 + AluJo SINE Alu 1 290 -22 22 0 0 0 chr18 24686095 24686117 -61302817 + AT_rich Low_complexity Low_complexity 1 22 0 518 250 27 7 chr18 24686161 24686309 -61302625 + L1ME LINE L1 5539 5689 -432 678 215 60 60 chr18 24686383 24686583 -61302351 - MIR SINE MIR -61 201 2 25 51 0 0 chr18 24686708 24686747 -61302187 + AT_rich Low_complexity Low_complexity 1 39 0 285 246 35 114 chr18 24688190 24688304 -61300630 - L2 LINE L2 -12 3301 3197 1751 152 11 18 chr18 24688594 24688877 -61300057 + AluJb SINE Alu 1 281 -31 2699 198 60 16 chr18 24688890 24689441 -61299493 + MLT1A1-int LTR MaLR 1160 1734 -1 1884 162 37 3 chr18 24689442 24689793 -61299141 + MLT1A1 LTR MaLR 1 363 -2 277 233 35 0 chr18 24689971 24690057 -61298877 - L1M4 LINE L1 -3095 3051 2963 315 301 55 20 chr18 24690219 24690365 -61298569 - L1M4 LINE L1 -3342 2804 2654 973 162 136 7 chr18 24690373 24690630 -61298304 + MER33 DNA MER1_type 1 278 -46 2182 101 7 3 chr18 24690631 24690927 -61298007 + AluSx SINE Alu 1 297 -15 1507 139 8 24 chr18 24691438 24691689 -61297245 - AluSx SINE Alu -16 296 50 318 279 100 72 chr18 24691793 24692044 -61296890 - MLT1H LTR MaLR -291 258 1 308 214 86 34 chr18 24692186 24692256 -61296678 - HAL1 LINE L1 -831 1676 1596 579 89 0 0 chr18 24692256 24692335 -61296599 + MADE1 DNA Mariner 2 80 0 308 214 86 34 chr18 24692335 24692381 -61296553 - HAL1 LINE L1 -911 1596 1554 351 0 0 0 chr18 24692599 24692638 -61296296 + (TA)n Simple_repeat Simple_repeat 1 39 0 844 158 54 79 chr18 24692871 24693074 -61295860 - AluJo SINE Alu -21 291 94 22 35 0 0 chr18 24693669 24693698 -61295236 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr18 24695120 24695144 -61293790 + AT_rich Low_complexity Low_complexity 1 24 0 447 270 143 59 chr18 24695463 24695819 -61293115 - MLT1J LTR MaLR -55 456 71 2318 91 0 10 chr18 24695831 24696139 -61292795 + AluY SINE Alu 1 305 -6 30 0 0 0 chr18 24696222 24696252 -61292682 + AT_rich Low_complexity Low_complexity 1 30 0 2307 80 7 7 chr18 24696330 24696630 -61292304 - AluSp SINE Alu -13 300 1 256 191 21 106 chr18 24696699 24696793 -61292141 - L1MC4 LINE L1 -1343 6699 6614 1668 150 20 36 chr18 24697126 24697432 -61291502 + AluSx SINE Alu 1 301 -11 23 0 0 0 chr18 24697594 24697617 -61291317 + AT_rich Low_complexity Low_complexity 1 23 0 395 270 100 45 chr18 24697986 24698186 -61290748 + L1ME4a LINE L1 5301 5511 -659 319 316 105 13 chr18 24698386 24698614 -61290320 + L1ME4a LINE L1 5871 6119 -2 2497 80 0 0 chr18 24699916 24700229 -61288705 + AluSq SINE Alu 1 313 0 21 0 0 0 chr18 24701863 24701884 -61287050 + AT_rich Low_complexity Low_complexity 1 21 0 2105 101 73 0 chr18 24703004 24703291 -61285643 + AluSx SINE Alu 1 308 -4 566 279 33 11 chr18 24703356 24703539 -61285395 + L1MC5 LINE L1 7722 7908 -53 256 267 33 25 chr18 24703711 24703831 -61285103 + MIR SINE MIR 92 212 -50 345 163 0 62 chr18 24704491 24704571 -61284363 - MIR SINE MIR -111 151 77 530 333 36 6 chr18 24704641 24704806 -61284128 + MIR SINE MIR 7 176 -86 252 333 78 39 chr18 24704865 24704994 -61283940 + MIR3 SINE MIR 2 135 -73 553 355 141 15 chr18 24705004 24705528 -61283406 - L2 LINE L2 -606 2708 2119 465 253 93 16 chr18 24705686 24705868 -61283066 - L2 LINE L2 -5 3308 3113 2732 265 66 17 chr18 24705888 24706832 -61282102 + L1ME1 LINE L1 398 1387 -5334 1910 223 68 110 chr18 24706841 24707708 -61281226 + L1ME1 LINE L1 1644 2466 -4255 919 165 15 39 chr18 24707708 24707809 -61281125 + L1MB7 LINE L1 5984 6079 -105 1600 167 32 18 chr18 24707809 24708091 -61280843 - AluJo SINE Alu -24 288 3 919 165 15 39 chr18 24708091 24708195 -61280739 + L1MB7 LINE L1 6079 6184 0 1910 223 68 110 chr18 24708195 24708563 -61280371 + L1ME1 LINE L1 2466 2848 -3873 1723 234 133 19 chr18 24708574 24709376 -61279558 + L1ME1 LINE L1 3220 4113 -2427 444 159 0 0 chr18 24709380 24709449 -61279485 - MER47A DNA MER2_type 0 366 298 * 743 209 6 13 chr18 24709445 24709603 -61279331 - MER47A DNA MER2_type -200 166 10 565 154 77 19 chr18 24709613 24709717 -61279217 - AluJo SINE Alu -143 169 60 5456 213 73 38 chr18 24709719 24710845 -61278089 + L1ME1 LINE L1 4117 5203 -1357 2117 86 3 83 chr18 24710845 24711181 -61277753 + AluSc SINE Alu 1 309 0 5456 213 73 38 chr18 24711181 24712404 -61276530 + L1ME1 LINE L1 5203 6552 -8 1449 279 70 44 chr18 24712407 24713132 -61275802 - L2 LINE L2 -183 3130 2381 461 372 52 61 chr18 24713745 24714073 -61274861 + L2 LINE L2 2945 3269 -3 220 263 92 26 chr18 24714467 24714543 -61274391 + L2 LINE L2 3233 3313 0 242 200 59 24 chr18 24715497 24715582 -61273352 + L1MB4 LINE L1 6093 6180 0 21 0 0 0 chr18 24715793 24715814 -61273120 + AT_rich Low_complexity Low_complexity 1 21 0 2201 98 10 0 chr18 24716708 24717003 -61271931 + AluSq SINE Alu 1 298 -15 24 53 0 0 chr18 24717135 24717173 -61271761 + AT_rich Low_complexity Low_complexity 1 38 0 1244 196 9 0 chr18 24720280 24720500 -61268434 + MER58A DNA MER1_type 2 223 -1 26 50 0 0 chr18 24720794 24720834 -61268100 + AT_rich Low_complexity Low_complexity 1 40 0 302 148 0 0 chr18 24721668 24721722 -61267212 + L1MB7 LINE L1 6131 6184 0 267 31 0 0 chr18 24722645 24722677 -61266257 + (A)n Simple_repeat Simple_repeat 1 32 0 224 396 0 10 chr18 24723314 24723415 -61265519 - MIR3 SINE MIR -102 106 7 2119 121 0 3 chr18 24724617 24724922 -61264012 + AluSq SINE Alu 1 304 -9 25 75 0 0 chr18 24726419 24726472 -61262462 + AT_rich Low_complexity Low_complexity 1 53 0 481 260 92 52 chr18 24726478 24726728 -61262206 - MIR SINE MIR 0 262 3 241 209 0 0 chr18 24727490 24727533 -61261401 + MER20 DNA MER1_type 3 45 -174 247 250 62 12 chr18 24727574 24727654 -61261280 - L2 LINE L2 -65 3248 3165 2263 98 3 10 chr18 24727795 24728100 -61260834 - AluSx SINE Alu -9 303 1 440 287 102 62 chr18 24728230 24728474 -61260460 + MER77 LTR ERV1 192 445 -160 1541 248 80 43 chr18 24728474 24729051 -61259883 + L2 LINE L2 2490 3152 -161 5352 179 34 33 chr18 24729151 24729377 -61259557 - Tigger6a DNA MER2_type -519 1078 854 2169 111 0 40 chr18 24729377 24729702 -61259232 + AluSx SINE Alu 1 312 0 5352 179 34 33 chr18 24729702 24730552 -61258382 - Tigger6a DNA MER2_type -743 854 1 292 201 94 148 chr18 24730567 24730716 -61258218 + MIR SINE MIR 120 260 -2 249 108 0 0 chr18 24730736 24730773 -61258161 + (A)n Simple_repeat Simple_repeat 1 37 0 244 321 0 0 chr18 24730794 24730878 -61258056 + MER103 DNA DNA 35 118 -48 2195 80 0 41 chr18 24731033 24731347 -61257587 + AluY SINE Alu 1 301 -10 586 279 161 28 chr18 24731464 24731923 -61257011 + L1MC4a LINE L1 5331 5850 -1958 191 254 0 51 chr18 24732458 24732517 -61256417 - MIR SINE MIR -148 114 59 337 274 133 22 chr18 24732849 24732984 -61255950 - L2 LINE L2 -43 3270 3121 1488 175 17 20 chr18 24732996 24733293 -61255641 - AluJo SINE Alu -16 296 1 1750 143 42 7 chr18 24733442 24733729 -61255205 + AluSx SINE Alu 1 297 -15 25 31 0 0 chr18 24733814 24733846 -61255088 + AT_rich Low_complexity Low_complexity 1 32 0 1418 69 0 21 chr18 24734198 24734418 -61254516 + AluYa5 SINE Alu 98 313 0 757 139 7 51 chr18 24734534 24734671 -61254263 + FLAM_C SINE Alu 3 133 -10 28 48 0 0 chr18 24735271 24735313 -61253621 + AT_rich Low_complexity Low_complexity 1 42 0 334 295 96 18 chr18 24736580 24736980 -61251954 + L1P LINE L1 4734 5165 -981 23 68 0 0 chr18 24736998 24737042 -61251892 + AT_rich Low_complexity Low_complexity 1 44 0 486 223 108 56 chr18 24737073 24737324 -61251610 + L1MC4a LINE L1 5280 5543 -2265 1880 188 21 6 chr18 24737426 24737755 -61251179 + MER2 DNA MER2_type 2 335 -10 386 235 12 0 chr18 24737786 24737871 -61251063 + L1MC4a LINE L1 5574 5659 -2149 328 299 94 51 chr18 24737939 24738193 -61250741 + L1MC4a LINE L1 5695 5959 -1849 2068 133 7 0 chr18 24738221 24738515 -61250419 - AluSq SINE Alu -16 297 2 1378 102 0 5 chr18 24738662 24738848 -61250086 + AluSx SINE Alu 1 185 -127 2395 75 7 3 chr18 24739166 24739471 -61249463 - AluSc SINE Alu -3 306 1 385 338 72 21 chr18 24742536 24742867 -61246067 + L1ME LINE L1 155 502 -5703 3538 149 38 35 chr18 24743243 24743979 -61244955 + L1MB7 LINE L1 5428 6165 -19 1478 161 0 106 chr18 24744057 24744387 -61244547 + AluY SINE Alu 1 295 -16 1462 161 0 0 chr18 24744449 24744679 -61244255 + AluY SINE Alu 1 230 -81 767 273 38 20 chr18 24744808 24745152 -61243782 + L1MB7 LINE L1 5829 6183 0 465 241 0 57 chr18 24745234 24745375 -61243559 + FLAM_C SINE Alu 11 143 0 1118 153 0 0 chr18 24745378 24745554 -61243380 + AluSg/x SINE Alu 121 296 -16 351 254 140 31 chr18 24745554 24745616 -61243318 + L1ME LINE L1 850 904 -5301 2140 99 0 0 chr18 24745616 24745923 -61243011 + AluY SINE Alu 1 307 0 351 254 140 31 chr18 24745923 24746052 -61242882 + L1ME LINE L1 904 1063 -5142 6461 251 109 40 chr18 24746072 24746563 -61242371 + L1ME LINE L1 1401 1857 -4358 1825 144 10 3 chr18 24746563 24746855 -61242079 + AluSx SINE Alu 1 294 -18 6461 251 109 40 chr18 24746855 24747822 -61241112 + L1ME LINE L1 1857 2756 -3459 2309 72 7 0 chr18 24747822 24748115 -61240819 + AluY SINE Alu 1 295 -16 6461 251 109 40 chr18 24748115 24750384 -61238550 + L1ME LINE L1 2756 5358 -857 504 0 0 0 chr18 24750385 24750441 -61238493 + (TA)n Simple_repeat Simple_repeat 2 57 0 471 230 96 7 chr18 24750510 24750645 -61238289 + L1ME1 LINE L1 6010 6156 -10 325 273 108 56 chr18 24750654 24750903 -61238031 + L2 LINE L2 3047 3308 -5 333 232 194 39 chr18 24750987 24751142 -61237792 + L2 LINE L2 2289 2467 -847 270 0 0 0 chr18 24751223 24751253 -61237681 + (CA)n Simple_repeat Simple_repeat 1 30 0 311 285 216 57 chr18 24752047 24752398 -61236536 - L2 LINE L2 -924 2390 1984 2197 110 6 56 chr18 24752424 24752779 -61236155 - MER1B DNA MER1_type 0 337 1 30 27 0 0 chr18 24753483 24753520 -61235414 + AT_rich Low_complexity Low_complexity 1 37 0 207 280 30 60 chr18 24753689 24753789 -61235145 + L2 LINE L2 2475 2571 -743 250 214 43 43 chr18 24754044 24754114 -61234820 - MER5B DNA MER1_type -4 174 105 234 91 0 0 chr18 24754130 24754163 -61234771 + (A)n Simple_repeat Simple_repeat 1 33 0 300 226 0 0 chr18 24754209 24754262 -61234672 + MER5B DNA MER1_type 125 177 -1 806 167 7 7 chr18 24754633 24754783 -61234151 + L1PB4 LINE L1 6003 6152 -4 553 257 81 109 chr18 24755521 24756171 -61232763 + L1MDa LINE L1 1252 1933 -4788 1690 201 10 0 chr18 24756171 24756469 -61232465 + AluJo SINE Alu 1 301 -11 553 257 81 109 chr18 24756469 24756658 -61232276 + L1MDa LINE L1 1933 2126 -4595 320 90 6 31 chr18 24756897 24756961 -61231973 + AluY SINE Alu 1 41 -262 1154 243 187 43 chr18 24757030 24757169 -61231765 + L1MDa LINE L1 2667 2785 -3755 2195 76 0 0 chr18 24757169 24757445 -61231489 + AluY SINE Alu 32 307 -4 1154 243 187 43 chr18 24757445 24758075 -61230859 + L1MDa LINE L1 2785 3547 -2993 5115 195 92 21 chr18 24758091 24759401 -61229533 + Charlie1a DNA MER1_type 54 1455 0 3417 254 94 43 chr18 24759401 24761132 -61227802 + L1MDa LINE L1 3567 5385 -1155 988 218 28 78 chr18 24761322 24761758 -61227176 + L1MC5 LINE L1 6820 7233 -728 885 210 78 44 chr18 24761779 24762184 -61226750 + L1MC5 LINE L1 7235 7579 -382 260 57 0 0 chr18 24762204 24762239 -61226695 + U2 snRNA snRNA 1 35 -153 256 250 11 54 chr18 24762334 24762426 -61226508 + L1MC5 LINE L1 7696 7783 -178 24 0 0 0 chr18 24762936 24762960 -61225974 + AT_rich Low_complexity Low_complexity 1 24 0 517 278 44 17 chr18 24762967 24763147 -61225787 - MIR SINE MIR -20 242 58 2186 113 0 3 chr18 24763226 24763527 -61225407 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr18 24764082 24764103 -61224831 + AT_rich Low_complexity Low_complexity 1 21 0 1875 154 7 7 chr18 24764197 24764502 -61224432 - AluJb SINE Alu -7 305 1 180 324 54 0 chr18 24765137 24765211 -61223723 + MIR3 SINE MIR 129 206 -2 821 184 89 80 chr18 24765278 24765615 -61223319 - L1MC4 LINE L1 0 8042 7703 560 0 0 0 chr18 24765667 24765736 -61223198 + AluYb8 SINE Alu 246 314 -4 2170 122 7 3 chr18 24765817 24766112 -61222822 - AluSx SINE Alu -16 296 1 21 36 0 0 chr18 24766271 24766299 -61222635 + AT_rich Low_complexity Low_complexity 1 28 0 1919 165 0 3 chr18 24766398 24766701 -61222233 + AluJo SINE Alu 2 303 -9 22 35 0 0 chr18 24766750 24766779 -61222155 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr18 24767490 24767512 -61221422 + AT_rich Low_complexity Low_complexity 1 22 0 1742 153 14 63 chr18 24768012 24768378 -61220556 - MER7A DNA MER2_type 0 346 1 3671 204 94 40 chr18 24768593 24769807 -61219127 + L1MC4 LINE L1 6764 8042 0 613 171 26 8 chr18 24769839 24769956 -61218978 - FLAM_C SINE Alu -24 119 1 378 314 101 50 chr18 24769957 24770215 -61218719 + L1MB8 LINE L1 5420 5690 -2118 1735 145 88 9 chr18 24770601 24770919 -61218015 - MER2 DNA MER2_type -1 343 1 1148 188 79 13 chr18 24770929 24771233 -61217701 + MER33 DNA MER1_type 1 324 0 2189 172 34 14 chr18 24771569 24772064 -61216870 + L1MB8 LINE L1 5674 6178 0 28 48 0 0 chr18 24772445 24772487 -61216447 + AT_rich Low_complexity Low_complexity 1 42 0 302 258 180 47 chr18 24773220 24773348 -61215586 + MIR3 SINE MIR 4 148 -60 219 281 48 90 chr18 24773618 24773785 -61215149 - L3b LINE CR1 -146 1437 1278 445 203 212 25 chr18 24774389 24774507 -61214427 + L2 LINE L2 3133 3272 0 22 35 0 0 chr18 24774808 24774837 -61214097 + GC_rich Low_complexity Low_complexity 1 29 0 30 83 0 0 chr18 24776353 24776425 -61212509 + AT_rich Low_complexity Low_complexity 1 72 0 1495 173 0 4 chr18 24776425 24776668 -61212266 + AluJb SINE Alu 60 301 -11 308 366 34 75 chr18 24776711 24776976 -61211958 - L2 LINE L2 -18 3254 3001 1651 157 24 31 chr18 24778421 24778708 -61210226 - AluJb SINE Alu -27 285 1 550 190 59 109 chr18 24779952 24780173 -61208761 + MLT1D LTR MaLR 1 210 -295 751 176 0 7 chr18 24780212 24780354 -61208580 + MLT1D LTR MaLR 365 505 0 23 54 0 0 chr18 24780402 24780439 -61208495 + AT_rich Low_complexity Low_complexity 1 37 0 589 223 0 0 chr18 24780649 24780788 -61208146 - Charlie1 DNA MER1_type 0 2761 2623 * 654 241 21 11 chr18 24780787 24780974 -61207960 - Charlie1 DNA MER1_type -2547 214 26 265 198 75 0 chr18 24781118 24781217 -61207717 + L1MEc LINE L1 2191 2300 -4096 2128 114 3 7 chr18 24781217 24781515 -61207419 + AluSc SINE Alu 1 297 -12 1569 135 77 72 chr18 24781539 24781925 -61207009 - MER51A LTR ERV1 0 634 262 231 111 0 0 chr18 24781909 24781945 -61206989 - MER51A LTR ERV1 -598 36 1 * 3021 226 105 47 chr18 24781951 24782462 -61206472 + L1M4 LINE L1 15 495 -6047 1801 156 26 23 chr18 24782462 24782769 -61206165 + AluJo SINE Alu 1 308 -4 3021 226 105 47 chr18 24782769 24783415 -61205519 + L1M4 LINE L1 495 1240 -5302 405 197 112 40 chr18 24783942 24784191 -61204743 + L1M4 LINE L1 1206 1472 -5070 6540 137 48 71 chr18 24784206 24785561 -61203373 + L1MA4 LINE L1 3811 5196 -1104 2170 94 30 14 chr18 24785561 24785858 -61203076 - AluSg SINE Alu -8 302 1 6540 137 48 71 chr18 24785858 24786766 -61202168 + L1MA4 LINE L1 5196 6005 -295 2353 75 0 10 chr18 24786766 24787072 -61201862 + AluY SINE Alu 1 303 -8 6540 137 48 71 chr18 24787072 24787351 -61201583 + L1MA4 LINE L1 6005 6289 -11 975 201 93 73 chr18 24787372 24787659 -61201275 + L1M4 LINE L1 1474 1771 -4875 2302 73 7 10 chr18 24787659 24787947 -61200987 - AluY SINE Alu -24 287 1 975 201 93 73 chr18 24787947 24788003 -61200931 + L1M4 LINE L1 1771 1824 -4822 285 57 38 19 chr18 24788196 24788249 -61200685 + (TA)n Simple_repeat Simple_repeat 2 55 0 270 0 0 0 chr18 24788267 24788297 -61200637 + (CA)n Simple_repeat Simple_repeat 1 30 0 234 111 0 0 chr18 24788307 24788343 -61200591 + MER51A LTR ERV1 1 36 -598 1030 154 177 101 chr18 24788358 24788754 -61200180 + MER51A LTR ERV1 209 634 0 761 174 0 51 chr18 24789464 24789602 -61199332 - FLAM_C SINE Alu -2 131 1 951 247 36 3 chr18 24789782 24790086 -61198848 + L1M4 LINE L1 1853 2166 -4480 271 308 13 18 chr18 24790091 24790318 -61198616 + L1M4 LINE L1 2265 2490 -4156 691 218 63 11 chr18 24790356 24790530 -61198404 - MLT1A1 LTR MaLR -8 357 175 386 223 0 58 chr18 24790658 24790779 -61198155 + Charlie1 DNA MER1_type 2167 2280 -481 446 226 102 0 chr18 24790783 24790920 -61198014 + L1M4 LINE L1 5376 5526 -1118 479 152 0 81 chr18 24790920 24791019 -61197915 + AluJ/FLAM SINE Alu 1 91 -221 1993 101 4 11 chr18 24791174 24791441 -61197493 - AluSx SINE Alu -47 265 1 5162 146 3 4 chr18 24791552 24793087 -61195847 - L1PA15 LINE L1 -1 6867 5339 816 154 0 8 chr18 24793090 24793213 -61195721 - FLAM_C SINE Alu -11 132 11 9941 208 15 16 chr18 24793218 24793628 -61195306 - L1PA15 LINE L1 -1512 5337 4928 2086 134 0 0 chr18 24793628 24793926 -61195008 + AluSg SINE Alu 1 298 -12 9941 208 15 16 chr18 24793926 24794258 -61194676 - L1PA15 LINE L1 -1921 4928 4597 2278 111 7 3 chr18 24794258 24794565 -61194369 - AluSq SINE Alu 0 313 6 9941 208 15 16 chr18 24794565 24796247 -61192687 - L1PA15 LINE L1 -2252 4597 2913 1423 164 44 12 chr18 24796249 24796499 -61192435 - AluJb SINE Alu -3 309 52 343 129 3 0 chr18 24796512 24796582 -61192352 + L1PA15-16 LINE L1 2114 2184 -3962 2741 245 17 34 chr18 24796586 24797512 -61191422 - L1PA15 LINE L1 -4040 2809 1899 710 256 4 13 chr18 24797536 24797774 -61191160 - L1MEd LINE L1 -3070 3059 2824 423 167 69 0 chr18 24797777 24797849 -61191085 + AluJ/FLAM SINE Alu 1 77 -235 961 178 0 0 chr18 24797867 24798019 -61190915 + FRAM SINE Alu 4 155 -21 390 340 18 73 chr18 24798032 24798373 -61190561 - L1MEd LINE L1 -3303 2826 2505 384 219 123 0 chr18 24798393 24798548 -61190386 - L1MEd LINE L1 -3704 2425 2252 253 132 14 3 chr18 24798568 24798625 -61190309 - Alu SINE Alu -4 296 251 2526 131 5 0 chr18 24798625 24799023 -61189911 + MSTA-int LTR MaLR 1252 1651 0 1918 154 133 13 chr18 24799023 24799405 -61189529 + MSTA LTR MaLR 1 428 0 435 144 0 0 chr18 24799405 24799496 -61189438 - L1P LINE L1 -1712 4434 4344 951 185 15 5 chr18 24799496 24799701 -61189233 + L1PA8 LINE L1 4705 4911 -1235 3022 189 76 61 chr18 24799717 24799856 -61189078 + L1PA8 LINE L1 5254 5389 -783 2292 82 0 7 chr18 24799856 24800148 -61188786 + AluY SINE Alu 1 290 -21 3022 189 76 61 chr18 24800148 24800908 -61188026 + L1PA8 LINE L1 5389 6166 -6 345 315 90 41 chr18 24800925 24801064 -61187870 - L1MEd LINE L1 -4140 2170 2039 2152 99 17 3 chr18 24801064 24801357 -61187577 - AluSg SINE Alu -9 301 5 2299 122 0 0 chr18 24801363 24801675 -61187259 - AluSx SINE Alu 0 312 1 345 315 90 41 chr18 24801675 24801871 -61187063 - L1MEd LINE L1 -4275 2035 1811 361 312 90 26 chr18 24801922 24802636 -61186298 - L1MEd LINE L1 -4612 1698 896 1503 150 83 81 chr18 24802972 24803088 -61185846 - Charlie1a DNA MER1_type -1315 1446 1332 1972 131 3 38 chr18 24803088 24803401 -61185533 - AluSx SINE Alu -10 302 1 1503 150 83 81 chr18 24803401 24803776 -61185158 - Charlie1a DNA MER1_type -1429 1332 954 265 216 0 0 chr18 24803803 24803854 -61185080 + L1PA12 LINE L1 7 57 -7524 1247 141 17 3 chr18 24803858 24804220 -61184714 - LTR19A LTR ERV1 -4 482 1 7861 229 67 18 chr18 24804220 24806940 -61181994 + L1PA12 LINE L1 53 3549 -4035 2118 119 0 7 chr18 24806940 24807234 -61181700 + AluSx SINE Alu 1 292 -20 7861 229 67 18 chr18 24807234 24808429 -61180505 + L1PA12 LINE L1 3549 4684 -2900 4705 94 1 14 chr18 24808429 24809087 -61179847 + L1PA11 LINE L1 5514 6166 -8 1845 197 67 76 chr18 24809095 24809160 -61179774 - Charlie1a DNA MER1_type -1817 944 880 2318 110 0 3 chr18 24809160 24809460 -61179474 + AluSx SINE Alu 1 299 -13 1845 197 67 76 chr18 24809460 24809841 -61179093 - Charlie1a DNA MER1_type -1881 880 505 1359 193 97 11 chr18 24809841 24810110 -61178824 - AluJo SINE Alu -20 292 1 1845 197 67 76 chr18 24810110 24810397 -61178537 - Charlie1a DNA MER1_type -2256 505 217 9962 133 13 38 chr18 24810405 24811797 -61177137 + Tigger4(Zombi) DNA MER2_type 2 1342 -1389 2034 122 14 11 chr18 24811797 24812084 -61176850 + AluSx SINE Alu 1 288 -24 9962 133 13 38 chr18 24812084 24812478 -61176456 + Tigger4(Zombi) DNA MER2_type 1342 1744 -987 2125 148 62 2 chr18 24812479 24812785 -61176149 + MSTA LTR MaLR 1 338 -90 3205 57 67 12 chr18 24812785 24813174 -61175760 + MLT2A1 LTR ERVL 1 416 -28 535 81 23 0 chr18 24813174 24813260 -61175674 + (TA)n Simple_repeat Simple_repeat 2 89 0 3205 57 67 12 chr18 24813260 24813291 -61175643 + MLT2A1 LTR ERVL 416 444 0 2125 148 62 2 chr18 24813291 24813388 -61175546 + MSTA LTR MaLR 338 428 0 5932 118 24 4 chr18 24813388 24814358 -61174576 + Tigger4(Zombi) DNA MER2_type 1741 2729 -2 861 270 15 0 chr18 24814367 24814567 -61174367 - Charlie1a DNA MER1_type -1250 205 3 21 0 0 0 chr18 24815619 24815640 -61173294 + AT_rich Low_complexity Low_complexity 1 21 0 592 278 33 11 chr18 24815892 24816072 -61172862 - MIR SINE MIR 0 262 79 311 246 101 7 chr18 24816214 24816352 -61172582 + L1MD3 LINE L1 7834 7984 -11 * 1621 244 52 0 chr18 24816345 24816787 -61172147 + L1MD2 LINE L1 5880 6344 -15 801 136 0 30 chr18 24817003 24817135 -61171799 + FLAM_C SINE Alu 1 128 -5 254 285 83 28 chr18 24817325 24817469 -61171465 - MIR SINE MIR 0 262 111 2645 42 0 0 chr18 24817594 24817905 -61171029 + AluY SINE Alu 1 311 0 441 50 0 0 chr18 24818937 24818997 -61169937 + (TG)n Simple_repeat Simple_repeat 2 61 0 2473 64 3 0 chr18 24819282 24819580 -61169354 + AluSp SINE Alu 2 300 -13 213 357 32 16 chr18 24821503 24821629 -61167305 - MIR SINE MIR -115 147 20 480 284 26 74 chr18 24821708 24821784 -61167150 + MIR SINE MIR 82 160 -102 2018 138 3 3 chr18 24821784 24822075 -61166859 + AluSx SINE Alu 1 291 -21 480 284 26 74 chr18 24822075 24822188 -61166746 + MIR SINE MIR 160 262 0 444 354 128 32 chr18 24822246 24822752 -61166182 - L2 LINE L2 0 3272 2734 353 338 113 19 chr18 24822822 24823035 -61165899 + MLT1K LTR MaLR 141 373 -215 513 317 81 42 chr18 24823212 24823594 -61165340 - L2 LINE L2 -595 2719 2323 1641 271 39 16 chr18 24823600 24824109 -61164825 + MLT1E LTR MaLR 1 521 -72 1366 225 120 28 chr18 24824483 24825220 -61163714 - L1M3c LINE L1 -4868 2169 1 312 318 150 37 chr18 24825221 24825788 -61163146 - L1 LINE L1 -2399 3747 3117 1689 167 106 0 chr18 24826312 24826594 -61162340 - AluJo SINE Alu 0 312 1 2130 65 0 0 chr18 24826646 24826907 -61162027 - AluY SINE Alu -10 301 41 1915 170 46 3 chr18 24827200 24827547 -61161387 - MLT1A1 LTR MaLR -3 362 1 4927 162 20 13 chr18 24827721 24828334 -61160600 + MER6 DNA MER2_type 2 624 -241 2058 114 0 7 chr18 24828334 24828632 -61160302 - AluSx SINE Alu -16 296 1 4927 162 20 13 chr18 24828632 24828876 -61160058 + MER6 DNA MER2_type 624 865 0 3171 211 107 30 chr18 24829529 24829714 -61159220 - L1MD2 LINE L1 -12 6347 6178 2502 77 3 0 chr18 24829714 24830026 -61158908 - AluSp SINE Alu 0 313 1 3171 211 107 30 chr18 24830026 24830829 -61158105 - L1MD2 LINE L1 -181 6178 5283 595 282 0 0 chr18 24830856 24830987 -61157947 + FLAM_A SINE Alu 1 131 -11 1661 196 7 0 chr18 24831093 24831368 -61157566 + AluJb SINE Alu 3 279 -33 2114 146 41 2 chr18 24831368 24831810 -61157124 - MSTA LTR MaLR -1 427 1 6671 214 56 61 chr18 24831835 24833449 -61155485 + L1 LINE L1 2761 4361 -1785 1567 179 47 36 chr18 24833449 24833750 -61155184 - AluJo SINE Alu -8 304 1 6671 214 56 61 chr18 24833750 24834511 -61154423 + L1 LINE L1 4361 5124 -1022 1338 125 52 35 chr18 24834612 24834844 -61154090 + MER46A DNA MER2_type 1 236 0 1346 191 0 12 chr18 24834949 24835200 -61153734 - AluJo SINE Alu -16 296 49 2021 159 0 9 chr18 24836918 24837233 -61151701 - AluJo SINE Alu 0 312 1 1366 209 82 34 chr18 24837258 24837636 -61151298 + MSTD LTR MaLR 1 396 0 23 54 0 0 chr18 24837727 24837764 -61151170 + AT_rich Low_complexity Low_complexity 1 37 0 257 290 66 35 chr18 24837994 24838253 -61150681 - L1ME LINE L1 -517 5604 5338 610 329 14 14 chr18 24838265 24838481 -61150453 + MIR SINE MIR 13 228 -34 2126 141 0 0 chr18 24838498 24838810 -61150124 - AluSx SINE Alu 0 312 1 1983 104 0 15 chr18 24839210 24839508 -61149426 - AluSc SINE Alu 0 310 17 1492 146 8 24 chr18 24839608 24839862 -61149072 + AluSx SINE Alu 19 268 -44 213 65 0 0 chr18 24839873 24839904 -61149030 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 280 291 48 10 chr18 24840174 24840277 -61148657 + MIR SINE MIR 130 236 -26 993 161 25 91 chr18 24840346 24840508 -61148426 + MER1B DNA MER1_type 1 143 -236 2184 96 10 0 chr18 24840508 24840801 -61148133 + AluSx SINE Alu 1 296 -16 993 161 25 91 chr18 24840801 24840881 -61148053 + MER1B DNA MER1_type 143 227 -112 470 250 0 0 chr18 24841020 24841112 -61147822 - AluS SINE Alu -221 92 1 46 0 0 0 chr18 24842062 24842108 -61146826 + AT_rich Low_complexity Low_complexity 1 46 0 283 212 47 0 chr18 24842246 24842331 -61146603 + T-rich Low_complexity Low_complexity 1 89 0 858 142 15 0 chr18 24842729 24842863 -61146071 - AluJo SINE Alu -176 136 1 35 24 0 0 chr18 24843068 24843110 -61145824 + AT_rich Low_complexity Low_complexity 1 42 0 1979 141 7 0 chr18 24843110 24843408 -61145526 + AluJb SINE Alu 1 300 -12 260 144 76 8 chr18 24843431 24843549 -61145385 + (TA)n Simple_repeat Simple_repeat 1 126 0 3934 161 11 13 chr18 24843555 24844856 -61144078 - L1MA5 LINE L1 -326 5974 4674 1904 142 7 24 chr18 24844948 24845244 -61143690 - AluSx SINE Alu -16 296 6 731 163 0 23 chr18 24845576 24845705 -61143229 + FLAM_A SINE Alu 10 135 -7 2000 123 25 7 chr18 24845733 24846017 -61142917 + AluSx SINE Alu 2 290 -22 203 30 0 61 chr18 24846112 24846145 -61142789 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 315 0 0 0 chr18 24846459 24846494 -61142440 + (CA)n Simple_repeat Simple_repeat 2 36 0 403 335 80 16 chr18 24846585 24846815 -61142119 + MIR SINE MIR 11 250 -12 10514 104 114 96 chr18 24846815 24847494 -61141440 + Tigger1 DNA MER2_type 54 719 -1699 1580 96 5 0 chr18 24847494 24847703 -61141231 + AluSg/x SINE Alu 89 298 -14 10514 104 114 96 chr18 24847703 24848446 -61140488 + Tigger1 DNA MER2_type 719 1447 -971 712 210 0 0 chr18 24848446 24848565 -61140369 + FLAM_C SINE Alu 1 119 -24 2139 130 0 3 chr18 24848572 24848873 -61140061 + AluSx SINE Alu 1 300 -12 2321 112 0 6 chr18 24848873 24849185 -61139749 + AluSx SINE Alu 1 310 -2 10514 104 114 96 chr18 24849185 24849957 -61138977 + Tigger1 DNA MER2_type 1451 2418 0 2320 106 0 3 chr18 24850254 24850556 -61138378 + AluSx SINE Alu 1 301 -11 2315 102 3 3 chr18 24850568 24850872 -61138062 + AluSq SINE Alu 1 304 -9 285 325 55 25 chr18 24850977 24851177 -61137757 - MLT1L LTR MaLR 0 615 410 2301 89 3 32 chr18 24851727 24852041 -61136893 + AluSg SINE Alu 5 309 -1 330 235 247 2 chr18 24852041 24852173 -61136761 + MIR SINE MIR 27 181 -71 653 300 53 11 chr18 24852492 24852755 -61136179 + L1MEd LINE L1 4 277 -5842 2041 127 0 7 chr18 24852826 24853117 -61135817 + AluSx SINE Alu 1 289 -23 334 151 0 0 chr18 24853128 24853181 -61135753 + AluJ/FLAM SINE Alu 9 61 -241 4101 201 6 9 chr18 24853186 24854098 -61134836 + L1MEd LINE L1 2109 3017 -3112 6679 128 12 19 chr18 24854112 24855024 -61133910 + L1MA2 LINE L1 4497 5398 -906 1893 138 0 18 chr18 24855024 24855306 -61133628 + AluJb SINE Alu 15 291 -21 6679 128 12 19 chr18 24855306 24856207 -61132727 + L1MA2 LINE L1 5398 6304 0 1911 161 0 3 chr18 24856232 24856531 -61132403 + AluJb SINE Alu 1 298 -14 188 412 0 15 chr18 24856599 24856667 -61132267 + L2 LINE L2 3110 3176 -96 194 326 174 7 chr18 24856835 24856979 -61131955 + MIR3 SINE MIR 30 197 -11 1012 99 0 0 chr18 24857112 24857243 -61131691 + AluSq/x SINE Alu 1 131 -182 189 0 0 0 chr18 24857884 24857905 -61131029 + (T)n Simple_repeat Simple_repeat 1 21 0 635 190 8 0 chr18 24857967 24858088 -61130846 - FLAM_A SINE Alu -11 122 1 865 214 62 4 chr18 24858146 24858390 -61130544 - HAL1 LINE L1 -726 1781 1520 1694 162 55 0 chr18 24858390 24858662 -61130272 - AluJb SINE Alu -25 287 1 865 214 62 4 chr18 24858662 24858674 -61130260 - HAL1 LINE L1 -987 1520 1510 415 243 150 14 chr18 24858731 24858871 -61130063 + L2 LINE L2 2489 2647 -667 1946 120 7 27 chr18 24858953 24859253 -61129681 + AluSp SINE Alu 2 295 -18 279 313 77 16 chr18 24859454 24859636 -61129298 + LTR16C LTR ERVL 299 491 0 310 343 66 0 chr18 24859642 24859823 -61129111 - L1ME LINE L1 -401 5769 5577 28 29 0 0 chr18 24860802 24860837 -61128097 + AT_rich Low_complexity Low_complexity 1 35 0 2345 98 0 0 chr18 24860846 24861141 -61127793 + AluSx SINE Alu 1 295 -17 1510 198 25 25 chr18 24861167 24861530 -61127404 - LTR40c LTR ERVL -5 460 98 352 160 53 0 chr18 24861575 24861650 -61127284 + Charlie1 DNA MER1_type 2649 2727 -34 687 230 74 46 chr18 24861664 24861881 -61127053 - MER58A DNA MER1_type 0 224 2 24 32 0 0 chr18 24862032 24862063 -61126871 + AT_rich Low_complexity Low_complexity 1 31 0 846 275 64 10 chr18 24862131 24862429 -61126505 - LTR40c LTR ERVL -113 352 39 863 264 86 51 chr18 24862445 24862943 -61125991 + L2 LINE L2 2687 3226 -87 2425 91 3 0 chr18 24862943 24863250 -61125684 - AluSp SINE Alu -5 308 1 863 264 86 51 chr18 24863250 24863342 -61125592 + L2 LINE L2 3226 3313 0 188 289 122 11 chr18 24864374 24864464 -61124470 - L3 LINE CR1 -1 1576 1477 1197 260 39 11 chr18 24864698 24865056 -61123878 - LTR16A LTR ERVL -61 389 22 262 197 33 16 chr18 24865222 24865283 -61123651 - MLT1J LTR MaLR -205 306 245 2120 120 7 0 chr18 24866045 24866336 -61122598 + AluSx SINE Alu 1 293 -19 724 268 28 67 chr18 24866460 24866567 -61122367 + MIR SINE MIR 8 118 -144 985 183 66 42 chr18 24866567 24866780 -61122154 + MER20 DNA MER1_type 1 218 -1 724 268 28 67 chr18 24866780 24866926 -61122008 + MIR SINE MIR 118 251 -11 1732 174 0 14 chr18 24867326 24867619 -61121315 + AluJo SINE Alu 1 289 -23 1702 178 36 10 chr18 24867722 24868025 -61120909 + AluJo SINE Alu 1 311 -1 791 158 23 23 chr18 24868692 24868825 -61120109 - FLAM_C SINE Alu 0 133 1 917 121 0 28 chr18 24869378 24869519 -61119415 + AluSq/x SINE Alu 3 139 -173 872 224 0 0 chr18 24870931 24871083 -61117851 + FRAM SINE Alu 1 151 -25 1626 208 0 10 chr18 24872127 24872421 -61116513 + AluJo SINE Alu 3 293 -19 284 267 0 12 chr18 24872810 24872896 -61116038 + ERVL LTR ERVL 5291 5375 -389 1001 294 83 50 chr18 24872931 24873695 -61115239 - ERVL LTR ERVL -427 5227 4476 914 167 40 0 chr18 24873707 24873857 -61115077 + FAM SINE Alu 11 166 -19 484 275 13 13 chr18 24873864 24874013 -61114921 - ERVL LTR ERVL -1210 4444 4296 2268 127 27 37 chr18 24874141 24874543 -61114391 - L1MA7 LINE L1 -12 6279 5882 278 238 128 43 chr18 24874589 24874689 -61114245 + L1MEd LINE L1 26 148 -5971 2295 85 0 3 chr18 24874689 24874997 -61113937 + AluY SINE Alu 1 307 0 278 238 128 43 chr18 24874997 24875059 -61113875 + L1MEd LINE L1 148 203 -5916 862 294 101 53 chr18 24875132 24875307 -61113627 - L2 LINE L2 -6 3307 3142 444 82 0 0 chr18 24875307 24875368 -61113566 + (TA)n Simple_repeat Simple_repeat 2 62 0 862 294 101 53 chr18 24875368 24875607 -61113327 - L2 LINE L2 -171 3142 2873 483 172 0 35 chr18 24875625 24875712 -61113222 + Tigger4(Zombi) DNA MER2_type 1 84 -2647 795 267 33 69 chr18 24875715 24876018 -61112916 - L2 LINE L2 -445 2869 2578 813 215 93 24 chr18 24876026 24876273 -61112661 - L2 LINE L2 -1225 2089 1826 856 109 0 0 chr18 24876274 24876384 -61112550 + FLAM_C SINE Alu 14 123 -20 1247 244 170 33 chr18 24876427 24876968 -61111966 + L1MC4 LINE L1 7205 7819 -223 1819 138 33 0 chr18 24877001 24877314 -61111620 - AluSx SINE Alu 0 322 1 295 217 92 50 chr18 24877445 24877565 -61111369 + L1MC4 LINE L1 7918 8042 0 347 284 28 0 chr18 24877568 24877677 -61111257 - L2 LINE L2 -1497 1817 1706 396 234 75 0 chr18 24877705 24877812 -61111122 - L2 LINE L2 0 3313 3199 2320 104 0 19 chr18 24877919 24878236 -61110698 + AluSx SINE Alu 1 311 -1 3871 188 103 83 chr18 24878354 24879589 -61109345 + Charlie1a DNA MER1_type 3 1276 -179 1331 190 73 84 chr18 24879589 24879958 -61108976 + MLT1B LTR MaLR 1 365 -25 369 270 148 37 chr18 24880001 24880190 -61108744 - HAL1 LINE L1 -2 2505 2296 * 481 256 189 33 chr18 24880176 24880605 -61108329 - HAL1 LINE L1 0 2507 2012 587 221 16 8 chr18 24880672 24880799 -61108135 - FLAM_A SINE Alu -5 128 1 661 280 58 0 chr18 24880869 24881094 -61107840 - HAL1 LINE L1 -740 1767 1530 1132 278 81 19 chr18 24881256 24881674 -61107260 + LTR33 LTR ERVL 45 488 -33 2517 174 64 21 chr18 24881674 24882158 -61106776 + MLT2B1 LTR ERVL 1 505 -15 836 103 9 0 chr18 24882178 24882294 -61106640 - AluSq/x SINE Alu -195 117 1 394 171 0 0 chr18 24882295 24882365 -61106569 + L1ME LINE L1 5584 5653 -511 2158 94 7 39 chr18 24882527 24882674 -61106260 + AluSq SINE Alu 1 134 -179 2480 61 3 29 chr18 24882674 24882987 -61105947 + AluSp SINE Alu 1 305 -8 2158 94 7 39 chr18 24882987 24883146 -61105788 + AluSq SINE Alu 134 297 -16 2152 126 0 7 chr18 24883158 24883459 -61105475 + AluSx SINE Alu 1 299 -13 2215 94 3 3 chr18 24883466 24883753 -61105181 + AluSx SINE Alu 5 291 -21 327 246 27 45 chr18 24883891 24884001 -61104933 + L1ME LINE L1 4 111 -6008 1903 142 10 7 chr18 24884005 24884293 -61104641 + AluJb SINE Alu 1 289 -23 251 247 101 0 chr18 24884328 24884417 -61104517 + L1ME LINE L1 105 202 -5917 975 285 34 42 chr18 24884455 24884605 -61104329 + L1ME LINE L1 4790 4940 -1189 2124 93 11 0 chr18 24884605 24884912 -61104022 + AluSx SINE Alu 1 310 0 2450 57 0 3 chr18 24884914 24885213 -61103721 + AluY SINE Alu 1 298 -13 975 285 34 42 chr18 24885213 24885535 -61103399 + L1ME LINE L1 4941 5262 -867 400 173 67 48 chr18 24885758 24885862 -61103072 + L1MEd LINE L1 11 116 -6003 403 169 0 0 chr18 24885862 24885921 -61103013 + AluJ/FLAM SINE Alu 2 60 -252 594 286 38 27 chr18 24885955 24886261 -61102673 + L1ME LINE L1 5352 5667 -480 3914 183 47 41 chr18 24886262 24886678 -61102256 - MER21B LTR ERV1 -41 822 410 1855 156 7 7 chr18 24886678 24886973 -61101961 + AluSx SINE Alu 1 295 -17 1904 122 49 14 chr18 24886973 24887261 -61101673 + AluSx SINE Alu 1 298 -14 3914 183 47 41 chr18 24887261 24887654 -61101280 - MER21B LTR ERV1 -452 411 7 761 184 0 22 chr18 24887680 24887816 -61101118 + FRAM SINE Alu 31 163 -13 357 281 48 24 chr18 24887816 24887983 -61100951 - L1M4 LINE L1 -736 5442 5272 363 225 238 49 chr18 24888057 24888202 -61100732 - MLT1J1 LTR MaLR 0 450 334 2418 97 0 0 chr18 24888202 24888513 -61100421 - AluY SINE Alu 0 311 1 363 225 238 49 chr18 24888513 24888598 -61100336 - MLT1J1 LTR MaLR -116 334 186 1423 153 129 207 chr18 24888653 24889026 -61099908 + L1 LINE L1 3975 4376 -1770 920 89 32 0 chr18 24889026 24889149 -61099785 + AluSg/x SINE Alu 170 296 -16 1423 153 129 207 chr18 24889149 24889279 -61099655 + L1 LINE L1 4376 4538 -1608 8629 42 1 0 chr18 24889279 24890247 -61098687 - LTR5 LTR ERVK 0 969 1 1423 153 129 207 chr18 24890247 24890348 -61098586 + L1 LINE L1 4538 4645 -1501 1828 146 3 51 chr18 24890371 24890686 -61098248 + AluJb SINE Alu 1 300 -12 2136 133 10 0 chr18 24890692 24891001 -61097933 + AluSx SINE Alu 1 312 0 248 328 221 8 chr18 24891063 24891185 -61097749 - MER5A DNA MER1_type -1 188 41 1040 244 119 36 chr18 24891269 24891726 -61097208 + L2 LINE L2 2801 3309 -4 2271 108 3 0 chr18 24891773 24892068 -61096866 + AluSx SINE Alu 1 296 -16 539 170 22 7 chr18 24892879 24893014 -61095920 + GA-rich Low_complexity Low_complexity 2 138 0 2322 95 0 22 chr18 24893521 24893838 -61095096 - AluSg SINE Alu 0 310 1 2062 133 3 7 chr18 24894585 24894885 -61094049 - AluSx SINE Alu -13 299 1 1877 166 3 3 chr18 24895192 24895487 -61093447 - AluJo SINE Alu -17 295 1 199 348 165 9 chr18 24895560 24895675 -61093259 + L2 LINE L2 3030 3162 -110 2076 130 0 10 chr18 24895860 24896159 -61092775 + AluSp SINE Alu 1 296 -17 2000 142 3 7 chr18 24896187 24896489 -61092445 + AluSx SINE Alu 1 301 -11 764 196 115 0 chr18 24896645 24896793 -61092141 + FRAM SINE Alu 1 165 -11 633 209 38 100 chr18 24896815 24897025 -61091909 + Charlie1a DNA MER1_type 2 198 -1257 1903 86 47 29 chr18 24897041 24897373 -61091561 - AluY SINE Alu 0 337 1 1802 127 0 118 chr18 24897384 24897707 -61091227 - AluJb SINE Alu -16 286 2 2235 158 158 14 chr18 24897708 24898223 -61090711 + MLT2B3 LTR ERVL 5 534 0 4695 184 59 18 chr18 24898238 24899267 -61089667 + Charlie1a DNA MER1_type 192 1263 -192 1867 139 26 42 chr18 24899269 24899579 -61089355 + AluJo SINE Alu 1 305 -7 2038 124 0 3 chr18 24899598 24899908 -61089026 + AluSg SINE Alu 1 309 0 346 273 55 0 chr18 24899957 24900067 -61088867 + LTR50 LTR ERVL 1 116 -679 269 264 137 58 chr18 24900276 24900476 -61088458 + LTR50 LTR ERVL 487 716 -79 2121 146 0 0 chr18 24900476 24900777 -61088157 - AluSx SINE Alu -11 301 1 269 264 137 58 chr18 24900777 24900853 -61088081 + LTR50 LTR ERVL 716 785 -10 487 179 0 26 chr18 24900861 24900978 -61087956 + Charlie1a DNA MER1_type 1271 1384 -71 2012 103 11 14 chr18 24901007 24901324 -61087610 + AluSg SINE Alu 1 316 0 823 165 0 0 chr18 24901358 24901485 -61087449 + AluJb SINE Alu 1 127 -185 246 259 0 0 chr18 24901517 24901571 -61087363 + MER103 DNA DNA 58 111 -55 856 161 0 0 chr18 24902263 24902393 -61086541 - FLAM_C SINE Alu -13 130 1 2192 115 3 0 chr18 24902590 24902886 -61086048 + AluSp SINE Alu 1 297 -16 409 208 133 17 chr18 24902886 24903006 -61085928 - L2 LINE L2 -1 3312 3179 271 321 99 38 chr18 24903043 24903255 -61085679 + L2 LINE L2 1997 2221 -1093 297 337 17 52 chr18 24903323 24903495 -61085439 + L2 LINE L2 2362 2527 -787 2322 111 0 0 chr18 24903549 24903846 -61085088 + AluSx SINE Alu 1 297 -15 1809 160 3 7 chr18 24903846 24904139 -61084795 - AluJb SINE Alu -20 292 1 1448 239 43 3 chr18 24904139 24904508 -61084426 + L1MC4 LINE L1 7101 7484 -558 1560 167 6 55 chr18 24904509 24904820 -61084114 + AluJb SINE Alu 1 296 -16 2048 117 14 7 chr18 24904822 24905112 -61083822 + AluSx SINE Alu 1 292 -20 29 28 0 0 chr18 24905112 24905148 -61083786 + AT_rich Low_complexity Low_complexity 1 36 0 246 159 72 58 chr18 24905152 24905221 -61083713 + L1MC4 LINE L1 7830 7899 -143 3338 211 17 14 chr18 24905234 24905877 -61083057 + MER82 DNA MER2_type 2 646 -7 275 163 62 38 chr18 24905949 24906029 -61082905 + L1MC4 LINE L1 7918 7999 -43 308 148 0 19 chr18 24906042 24906096 -61082838 + MER82 DNA MER2_type 388 440 -213 1588 179 57 0 chr18 24906097 24906360 -61082574 - AluJo SINE Alu -34 278 1 254 130 22 0 chr18 24906374 24906420 -61082514 + L1MD3 LINE L1 7941 7987 -8 229 365 17 0 chr18 24906490 24906605 -61082329 + L2 LINE L2 2794 2910 -404 703 188 0 39 chr18 24906907 24907035 -61081899 + FLAM_C SINE Alu 2 124 -19 1443 196 14 11 chr18 24907207 24907488 -61081446 + AluJo SINE Alu 1 282 -30 321 26 0 0 chr18 24907491 24907529 -61081405 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 328 350 55 64 chr18 24907539 24907750 -61081184 - L2 LINE L2 -639 2675 2466 1983 121 10 3 chr18 24907750 24908048 -61080886 - AluSx SINE Alu -12 300 1 328 350 55 64 chr18 24908048 24908147 -61080787 - L2 LINE L2 -848 2466 2368 291 283 0 0 chr18 24908151 24908211 -61080723 - MER2 DNA MER2_type 0 345 286 409 294 72 22 chr18 24908246 24908426 -61080508 - L2 LINE L2 -974 2340 2152 224 368 28 0 chr18 24908731 24908837 -61080097 - L2 LINE L2 -262 3010 2902 731 270 0 6 chr18 24909079 24909242 -61079692 + L2 LINE L2 1404 1565 -1749 786 213 27 7 chr18 24909253 24909403 -61079531 - FAM SINE Alu -19 166 14 1251 223 133 28 chr18 24909403 24909802 -61079132 + L2 LINE L2 1553 1993 -1321 2079 131 7 0 chr18 24909811 24910108 -61078826 - AluSx SINE Alu -13 299 1 193 255 0 0 chr18 24910127 24910174 -61078760 + L2 LINE L2 3265 3311 -2 1977 157 0 3 chr18 24910743 24911037 -61077897 - AluSx SINE Alu -18 294 2 1136 178 10 92 chr18 24911070 24911212 -61077722 + AluJb SINE Alu 11 118 -194 222 37 0 0 chr18 24911212 24911239 -61077695 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1136 178 10 92 chr18 24911239 24911389 -61077545 + AluJb SINE Alu 118 279 -33 357 24 0 0 chr18 24911434 24911476 -61077458 + (CA)n Simple_repeat Simple_repeat 2 43 0 289 273 11 34 chr18 24911803 24911891 -61077043 - L2 LINE L2 0 3272 3187 1019 220 67 5 chr18 24912313 24912522 -61076412 - MLT1A1 LTR MaLR 0 365 144 23 0 0 0 chr18 24912522 24912545 -61076389 + AT_rich Low_complexity Low_complexity 1 23 0 357 200 100 0 chr18 24912548 24912628 -61076306 - L1MA7 LINE L1 -7 6284 6197 507 169 10 6 chr18 24912629 24912739 -61076195 - MLT1A1 LTR MaLR -233 132 59 1184 153 136 34 chr18 24912774 24913046 -61075888 + AluJo SINE Alu 24 319 0 195 42 0 0 chr18 24915095 24915119 -61073815 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 823 146 15 0 chr18 24915124 24915261 -61073673 - FRAM SINE Alu -37 139 1 750 123 0 19 chr18 24916101 24916207 -61072727 + AluSg/x SINE Alu 176 279 -33 193 277 96 24 chr18 24916372 24916455 -61072479 - MIR SINE MIR -127 135 47 186 308 10 77 chr18 24916515 24916619 -61072315 - MIR3 SINE MIR -11 197 101 2395 97 3 0 chr18 24916936 24917247 -61071687 - AluSx SINE Alu 0 312 1 228 182 0 0 chr18 24917410 24917454 -61071480 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 2193 94 10 13 chr18 24918480 24918779 -61070155 - AluSp SINE Alu -5 308 11 2049 148 3 3 chr18 24918791 24919095 -61069839 - AluSx SINE Alu -4 308 5 678 118 13 1 chr18 24919101 24919221 -61069713 - LTR12 LTR ERV1 0 714 481 332 184 46 35 chr18 24919222 24919309 -61069625 - LTR30 LTR ERV1 -79 643 556 351 131 16 0 chr18 24919309 24919370 -61069564 - LTR12 LTR ERV1 -425 289 228 1556 128 4 8 chr18 24919427 24919662 -61069272 - LTR12 LTR ERV1 -480 234 1 10375 99 3 10 chr18 24919673 24921126 -61067808 - HERV9 LTR ERV1 -2 8397 6955 * 32170 105 13 10 chr18 24921125 24925997 -61062937 - HERV9 LTR ERV1 -2858 5541 574 41664 65 7 2 chr18 24926037 24932157 -61056777 - L1PA5 LINE L1 -1 6153 1 3828 110 2 0 chr18 24932158 24932686 -61056248 - HERV9 LTR ERV1 -7817 582 54 520 137 0 0 chr18 24932702 24932775 -61056159 - LTR12 LTR ERV1 -130 584 512 317 197 33 98 chr18 24932775 24932897 -61056037 - LTR30 LTR ERV1 -56 666 553 315 133 93 13 chr18 24932898 24932973 -61055961 - LTR12 LTR ERV1 -429 285 205 960 201 5 19 chr18 24932986 24933195 -61055739 - LTR12 LTR ERV1 -456 258 53 253 231 0 0 chr18 24933195 24933247 -61055687 - LTR30 LTR ERV1 -670 52 1 690 267 50 23 chr18 24933264 24933522 -61055412 - L1MC/D LINE L1 -1988 5820 5556 257 364 0 0 chr18 24933653 24933730 -61055204 + L3 LINE CR1 482 558 -1019 188 305 0 0 chr18 24933804 24933863 -61055071 + L3 LINE CR1 667 725 -852 347 174 29 14 chr18 24933910 24933979 -61054955 + MIR SINE MIR 47 116 -146 2208 99 7 0 chr18 24933987 24934279 -61054655 - AluSx SINE Alu -18 294 1 2117 108 3 46 chr18 24934287 24934611 -61054323 - AluSp SINE Alu -3 310 1 1785 166 20 3 chr18 24935045 24935340 -61053594 + AluSx SINE Alu 1 300 -12 1477 181 18 11 chr18 24935340 24935617 -61053317 - AluJb SINE Alu -28 284 6 207 0 0 0 chr18 24935725 24935748 -61053186 + (A)n Simple_repeat Simple_repeat 1 23 0 2110 93 7 14 chr18 24935761 24936050 -61052884 + AluSp SINE Alu 11 297 -16 267 304 57 41 chr18 24936158 24936474 -61052460 - L1M4b LINE L1 -4410 2728 2408 1494 180 35 25 chr18 24936488 24936771 -61052163 - AluJo SINE Alu -21 291 6 5909 225 121 27 chr18 24936817 24937068 -61051866 - L1M4b LINE L1 -4831 2024 1798 7942 39 5 0 chr18 24937068 24938430 -61050504 - L1PA5 LINE L1 0 6154 4789 5909 225 121 27 chr18 24938430 24938956 -61049978 - L1M4b LINE L1 -5057 1798 1323 2745 6 0 58 chr18 24938956 24939283 -61049651 - AluYa5 SINE Alu -3 308 1 5909 225 121 27 chr18 24939283 24940261 -61048673 - L1M4b LINE L1 -5532 1323 108 1631 178 0 20 chr18 24940261 24940564 -61048370 - AluSx SINE Alu -15 297 1 5909 225 121 27 chr18 24940564 24940681 -61048253 - L1M4b LINE L1 -6747 108 3 1649 173 10 39 chr18 24940725 24941037 -61047897 - AluJo SINE Alu -9 303 1 532 250 13 26 chr18 24941118 24941274 -61047660 - L1MC/D LINE L1 -599 5565 5412 330 236 79 29 chr18 24941294 24941434 -61047500 - L1MC/D LINE L1 -872 5274 5128 834 150 13 26 chr18 24941493 24941646 -61047288 - FRAM SINE Alu -6 170 20 1579 151 98 53 chr18 24941780 24941940 -61046994 - LTR56 LTR ERV1 0 445 294 2028 104 56 7 chr18 24941940 24942227 -61046707 + AluSx SINE Alu 1 301 -11 1579 151 98 53 chr18 24942227 24942471 -61046463 - LTR56 LTR ERV1 -151 294 31 535 279 40 18 chr18 24942488 24942714 -61046220 - L1MC/D LINE L1 -1188 4958 4728 1428 190 28 35 chr18 24943348 24943638 -61045296 - AluJo SINE Alu -24 288 1 1255 141 0 11 chr18 24943674 24943858 -61045076 - AluSq SINE Alu -131 182 1 2256 98 10 0 chr18 24943897 24944193 -61044741 - AluSp SINE Alu -14 299 1 2462 77 0 3 chr18 24944363 24944673 -61044261 + AluY SINE Alu 1 309 -2 21 0 0 0 chr18 24944698 24944719 -61044215 + AT_rich Low_complexity Low_complexity 1 21 0 299 64 0 21 chr18 24945944 24945991 -61042943 + (TTTTA)n Simple_repeat Simple_repeat 2 47 0 1960 136 7 4 chr18 24945994 24946274 -61042660 - AluSx SINE Alu -31 281 1 330 379 20 30 chr18 24946358 24946659 -61042275 - MERVL LTR ERVL -666 4819 4522 472 278 196 5 chr18 24946820 24947029 -61041905 - MIR SINE MIR -12 250 2 318 288 81 0 chr18 24947051 24947162 -61041772 - L1ME LINE L1 -459 5662 5543 23 68 0 0 chr18 24947706 24947750 -61041184 + AT_rich Low_complexity Low_complexity 1 44 0 758 160 0 17 chr18 24947750 24947869 -61041065 - FLAM_C SINE Alu -25 118 2 328 153 337 0 chr18 24947897 24947995 -61040939 + Charlie4 DNA MER1_type 12 142 -1819 461 248 25 38 chr18 24948017 24948174 -61040760 + Charlie4 DNA MER1_type 79 233 -1728 2193 100 0 10 chr18 24948883 24949184 -61039750 + AluSx SINE Alu 1 298 -14 1100 165 44 22 chr18 24949184 24949423 -61039511 - MER61B LTR ERV1 -73 352 15 1245 169 64 0 chr18 24949445 24949664 -61039270 - MER1B DNA MER1_type -64 233 1 287 301 119 27 chr18 24950265 24950601 -61038333 - L1M4 LINE L1 -2443 3703 3337 810 191 0 0 chr18 24950812 24950938 -61037996 - FLAM_C SINE Alu -7 126 1 331 258 27 93 chr18 24951585 24951747 -61037187 - MIR SINE MIR -61 147 37 2097 126 3 0 chr18 24952377 24952695 -61036239 - AluSx SINE Alu 0 319 1 301 120 0 0 chr18 24952820 24952870 -61036064 - L1MA9 LINE L1 -34 6278 6229 2446 106 0 0 chr18 24952974 24953285 -61035649 + AluSx SINE Alu 2 312 0 217 213 49 16 chr18 24953364 24953425 -61035509 + MIR SINE MIR 79 141 -121 1439 183 91 54 chr18 24954199 24954330 -61034604 - Charlie1a DNA MER1_type -1306 1455 1330 1700 176 0 14 chr18 24954330 24954625 -61034309 - AluJo SINE Alu -21 291 1 1439 183 91 54 chr18 24954625 24954935 -61033999 - Charlie1a DNA MER1_type -1431 1330 998 * 2895 221 76 39 chr18 24954934 24955539 -61033395 - Charlie1a DNA MER1_type -1865 896 252 1531 191 7 19 chr18 24955539 24955848 -61033086 - AluJo SINE Alu -7 305 1 2895 221 76 39 chr18 24955848 24956058 -61032876 - Charlie1a DNA MER1_type -2509 252 51 5768 177 59 15 chr18 24956147 24956995 -61031939 + L1PA16 LINE L1 4014 4824 -1342 1893 149 0 20 chr18 24956995 24957296 -61031638 + AluSx SINE Alu 1 295 -17 5768 177 59 15 chr18 24957296 24958509 -61030425 + L1PA16 LINE L1 4824 6156 -10 11165 142 34 17 chr18 24959556 24961007 -61027927 - Tigger1 DNA MER2_type 0 2418 928 2164 107 3 13 chr18 24961007 24961307 -61027627 + AluSx SINE Alu 1 297 -15 11165 142 34 17 chr18 24961307 24961720 -61027214 - Tigger1 DNA MER2_type -1490 928 523 2082 89 34 7 chr18 24961835 24962126 -61026808 + AluSx SINE Alu 1 299 -13 1326 150 0 52 chr18 24962193 24962426 -61026508 - AluJb SINE Alu -5 307 87 1552 148 118 7 chr18 24962450 24962721 -61026213 - AluSg1 SINE Alu -3 306 6 22 0 0 0 chr18 24963854 24963876 -61025058 + AT_rich Low_complexity Low_complexity 1 22 0 1992 139 0 17 chr18 24963933 24964227 -61024707 - AluSx SINE Alu -22 290 2 317 212 153 66 chr18 24964245 24964382 -61024552 - L1MC4 LINE L1 -143 7899 7751 826 187 0 7 chr18 24964405 24964544 -61024390 - FLAM_C SINE Alu -5 138 1 191 68 102 169 chr18 24965255 24965314 -61023620 - MER5B DNA MER1_type -123 55 1 2347 86 6 6 chr18 24965592 24965905 -61023029 + AluSq SINE Alu 1 313 0 275 71 24 0 chr18 24966702 24966744 -61022190 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1318 181 0 13 chr18 24966746 24966973 -61021961 - AluJb SINE Alu -31 281 58 793 110 47 0 chr18 24967249 24967376 -61021558 - MER65A LTR ERV1 0 445 313 1423 158 0 42 chr18 24967376 24967636 -61021298 - AluJo SINE Alu -11 301 53 1728 160 27 50 chr18 24967637 24967974 -61020960 - MER65A LTR ERV1 -116 329 1 755 136 0 0 chr18 24968498 24968608 -61020326 - AluSg/x SINE Alu -8 302 193 2210 102 0 7 chr18 24968679 24968973 -61019961 + AluSx SINE Alu 14 305 -7 741 212 42 28 chr18 24968992 24969209 -61019725 + L1MC5 LINE L1 7694 7913 -48 2087 108 0 18 chr18 24969786 24970072 -61018862 - AluSx SINE Alu -31 281 1 2536 234 71 29 chr18 24970901 24971705 -61017229 - L1ME2 LINE L1 -9 6155 5318 224 213 40 0 chr18 24971748 24971823 -61017111 + (TA)n Simple_repeat Simple_repeat 1 78 0 227 213 25 8 chr18 24971843 24971965 -61016969 + (TA)n Simple_repeat Simple_repeat 1 124 0 860 230 44 7 chr18 24972072 24972328 -61016606 + L1M4 LINE L1 5014 5272 -874 33 73 0 0 chr18 24972328 24972396 -61016538 + AT_rich Low_complexity Low_complexity 1 68 0 377 247 146 59 chr18 24972465 24972578 -61016356 - HAL1b LINE L1 -644 704 602 1954 152 46 21 chr18 24972578 24972907 -61016027 - MER1B DNA MER1_type 0 337 1 377 247 146 59 chr18 24972907 24973032 -61015902 - HAL1b LINE L1 -746 602 445 207 0 0 0 chr18 24973234 24973257 -61015677 + (TG)n Simple_repeat Simple_repeat 2 24 0 2563 209 34 89 chr18 24973856 24974072 -61014862 - L1ME1 LINE L1 -55 6045 5819 2197 175 32 35 chr18 24974072 24974102 -61014832 - MER65C LTR ERV1 0 461 432 2064 113 27 7 chr18 24974102 24974395 -61014539 + AluSx SINE Alu 1 299 -13 2197 175 32 35 chr18 24974395 24974826 -61014108 - MER65C LTR ERV1 -29 432 1 2563 209 34 89 chr18 24974826 24975452 -61013482 - L1ME1 LINE L1 -281 5819 5249 2016 105 0 39 chr18 24975471 24975776 -61013158 - AluY SINE Alu -18 293 1 1663 174 0 45 chr18 24975778 24976089 -61012845 - AluJo SINE Alu -15 297 1 2453 84 3 0 chr18 24976096 24976404 -61012530 - AluSp SINE Alu -4 309 1 556 70 0 0 chr18 24976428 24976499 -61012435 - U3 snRNA snRNA -146 71 1 937 261 152 54 chr18 24976526 24977249 -61011685 - L1ME1 LINE L1 -2215 3865 3214 1664 156 67 25 chr18 24977249 24977532 -61011402 - AluJo SINE Alu -17 295 1 937 261 152 54 chr18 24977532 24977551 -61011383 - L1ME1 LINE L1 -2866 3214 3198 270 0 0 0 chr18 24977551 24977581 -61011353 + (TTA)n Simple_repeat Simple_repeat 1 30 0 937 261 152 54 chr18 24977581 24978179 -61010755 - L1ME1 LINE L1 -2882 3198 2392 337 319 6 38 chr18 24978212 24978369 -61010565 - L1ME1 LINE L1 -5840 230 79 1832 153 7 23 chr18 24978536 24978837 -61010097 - AluJo SINE Alu -16 296 1 388 271 71 6 chr18 24979442 24979612 -61009322 - L1M4 LINE L1 -948 5198 5018 21 0 0 0 chr18 24979612 24979633 -61009301 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr18 24979796 24979831 -61009103 + AT_rich Low_complexity Low_complexity 1 35 0 254 211 40 13 chr18 24979886 24979962 -61008972 + L1MEd LINE L1 895 972 -5147 353 277 43 11 chr18 24979968 24980062 -61008872 - L1MEd LINE L1 -5462 657 561 513 318 120 53 chr18 24980321 24980848 -61008086 - L1M4 LINE L1 -784 5362 4768 1840 110 4 0 chr18 24980848 24981118 -61007816 - AluSx SINE Alu 0 308 38 513 318 120 53 chr18 24981118 24981338 -61007596 - L1M4 LINE L1 -1378 4768 4564 196 375 0 12 chr18 24981542 24981622 -61007312 + L2 LINE L2 2878 2956 -357 300 200 40 53 chr18 24981946 24982021 -61006913 + L2 LINE L2 3231 3304 -9 2175 64 3 41 chr18 24982212 24982537 -61006397 - AluY SINE Alu 0 314 1 318 128 144 48 chr18 24982920 24983045 -61005889 + L1MC5 LINE L1 7625 7761 -200 1751 104 8 4 chr18 24983290 24983531 -61005403 + AluSx SINE Alu 15 256 -56 801 188 0 0 chr18 24983549 24983682 -61005252 + AluSg/x SINE Alu 128 260 -50 2222 102 3 26 chr18 24984039 24984352 -61004582 + AluSx SINE Alu 1 306 -6 325 289 44 69 chr18 24984443 24984602 -61004332 + MER5A DNA MER1_type 27 181 -8 876 222 53 83 chr18 24984602 24984999 -61003935 + Charlie1 DNA MER1_type 1818 2202 -559 25 0 0 0 chr18 24985271 24985296 -61003638 + AT_rich Low_complexity Low_complexity 1 25 0 255 312 8 64 chr18 24985397 24985522 -61003412 + AluSp/q SINE Alu 186 303 0 23 0 0 0 chr18 24985674 24985697 -61003237 + AT_rich Low_complexity Low_complexity 1 23 0 1279 174 51 86 chr18 24985801 24986174 -61002760 + Charlie1 DNA MER1_type 1843 2202 -559 335 140 140 70 chr18 24986170 24986341 -61002593 + Charlie1 DNA MER1_type 2475 2657 -104 * 342 305 51 73 chr18 24986342 24986447 -61002487 - MIR SINE MIR -79 183 82 2037 127 20 0 chr18 24986447 24986746 -61002188 - AluSx SINE Alu -7 305 1 342 305 51 73 chr18 24986746 24986817 -61002117 - MIR SINE MIR -180 82 11 398 317 0 91 chr18 24986821 24987029 -61001905 + MER5A DNA MER1_type 1 189 0 289 204 15 2 chr18 24987652 24987725 -61001209 - L1ME LINE L1 -350 5771 5697 2012 99 60 11 chr18 24987975 24988258 -61000676 + AluSx SINE Alu 1 297 -15 222 261 58 0 chr18 24988425 24988494 -61000440 - L2 LINE L2 -571 2743 2671 344 298 0 0 chr18 24989766 24989850 -60999084 - MIR3 SINE MIR -26 182 99 1646 192 0 7 chr18 24990293 24990590 -60998344 - AluJo SINE Alu -17 295 1 212 210 65 0 chr18 24991084 24991146 -60997788 + (TATATG)n Simple_repeat Simple_repeat 5 70 0 603 0 0 0 chr18 24991718 24991785 -60997149 + (TC)n Simple_repeat Simple_repeat 1 67 0 279 0 0 0 chr18 24991784 24991815 -60997119 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 24 0 0 0 chr18 24992180 24992204 -60996730 + AT_rich Low_complexity Low_complexity 1 24 0 1539 111 0 9 chr18 24992542 24992758 -60996176 + AluSq SINE Alu 1 214 -99 2007 136 19 13 chr18 24992996 24993306 -60995628 - AluSx SINE Alu 0 312 1 2377 86 0 3 chr18 24993648 24993952 -60994982 - AluSq SINE Alu -10 303 1 817 218 73 59 chr18 24994042 24994185 -60994749 - MER58A DNA MER1_type -2196 224 75 1291 226 90 17 chr18 24994185 24994530 -60994404 - MLT1A2 LTR MaLR 0 374 5 817 218 73 59 chr18 24994530 24994606 -60994328 - MER58A DNA MER1_type -2345 75 2 1456 176 0 8 chr18 24994664 24994902 -60994032 - AluJb SINE Alu -21 291 56 1790 163 0 0 chr18 24995544 24995821 -60993113 + AluJo SINE Alu 11 287 -25 2168 119 0 25 chr18 24995832 24996152 -60992782 + AluSx SINE Alu 1 312 0 2018 144 0 0 chr18 24996213 24996512 -60992422 - AluSq SINE Alu -14 299 1 546 248 64 76 chr18 24998208 24998458 -60990476 - L1MA9 LINE L1 -1 6290 6044 2856 230 46 7 chr18 24999097 24999959 -60988975 - L1M4 LINE L1 -2727 3655 2760 1197 145 0 86 chr18 24999965 25000199 -60988735 - AluJo SINE Alu -13 299 86 1159 191 136 18 chr18 25000219 25000772 -60988162 - L1M4 LINE L1 -3642 2740 2117 938 128 0 0 chr18 25000909 25001034 -60987900 - AluSq/x SINE Alu -188 125 1 21 0 0 0 chr18 25002536 25002557 -60986377 + AT_rich Low_complexity Low_complexity 1 21 0 1856 108 13 59 chr18 25004200 25004507 -60984427 - AluSx SINE Alu -19 293 1 2234 113 0 3 chr18 25004791 25005101 -60983833 + AluSc SINE Alu 1 309 0 468 182 55 0 chr18 25005121 25005231 -60983703 - L1MC4 LINE L1 -2 8040 7925 1934 123 20 3 chr18 25005238 25005538 -60983396 - AluSg SINE Alu -5 305 1 374 265 20 0 chr18 25005587 25005674 -60983260 + CT-rich Low_complexity Low_complexity 3 94 -12 1759 200 7 0 chr18 25005674 25005979 -60982955 - AluJo SINE Alu -5 307 1 374 265 20 0 chr18 25005979 25005993 -60982941 + CT-rich Low_complexity Low_complexity 94 106 0 956 248 93 16 chr18 25006050 25006372 -60982562 - L1MC4 LINE L1 -282 7760 7414 1322 177 5 0 chr18 25006425 25006640 -60982294 - AluJb SINE Alu -10 302 87 2633 242 75 23 chr18 25006641 25007460 -60981474 - L1MC4 LINE L1 -722 7320 6460 1290 301 108 22 chr18 25008033 25008662 -60980272 + L2 LINE L2 2231 2913 -401 1070 302 90 56 chr18 25008674 25009069 -60979865 + L2 LINE L2 2312 2692 -621 219 36 0 0 chr18 25009069 25009097 -60979837 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1070 302 90 56 chr18 25009097 25009149 -60979785 + L2 LINE L2 2692 2741 -572 2146 105 10 7 chr18 25009149 25009454 -60979480 - AluSq SINE Alu -7 306 1 1070 302 90 56 chr18 25009454 25009850 -60979084 + L2 LINE L2 2741 3182 -131 1019 151 0 0 chr18 25009852 25010004 -60978930 - AluSg/x SINE Alu -21 291 140 1578 194 7 20 chr18 25010012 25010311 -60978623 - AluJo SINE Alu -17 295 1 225 230 73 128 chr18 25010362 25010566 -60978368 + L2 LINE L2 3115 3307 -6 194 160 20 0 chr18 25010629 25010679 -60978255 + (TA)n Simple_repeat Simple_repeat 2 52 0 2393 100 3 0 chr18 25014035 25014345 -60974589 - AluSx SINE Alu -1 311 1 1905 146 0 17 chr18 25014788 25015076 -60973858 + AluSx SINE Alu 1 283 -29 2386 92 3 0 chr18 25015192 25015497 -60973437 - AluSp SINE Alu -5 308 3 1610 189 3 3 chr18 25016046 25016348 -60972586 - AluJo SINE Alu -10 302 1 830 206 21 46 chr18 25017267 25017461 -60971473 - MER5A DNA MER1_type 0 189 1 209 336 118 9 chr18 25017825 25017935 -60970999 + MIR SINE MIR 19 140 -68 307 346 46 0 chr18 25019687 25019817 -60969117 + L1MDa LINE L1 472 607 -5923 392 301 42 23 chr18 25020147 25020344 -60968590 + L1MDa LINE L1 855 1053 -5477 1298 204 9 0 chr18 25020356 25020576 -60968358 - MER8 DNA MER2_type -17 222 1 968 224 54 30 chr18 25020580 25020915 -60968019 + L1MDa LINE L1 1067 1409 -5134 760 208 109 113 chr18 25020912 25021408 -60967526 + L1MDa LINE L1 1660 2153 -4387 * 3689 216 58 14 chr18 25021416 25022679 -60966255 + L1M2c LINE L1 4 1832 -4957 918 198 0 23 chr18 25022680 25022857 -60966077 - FRAM SINE Alu -6 170 1 4329 204 41 25 chr18 25022858 25023465 -60965469 + L1M2c LINE L1 1801 2397 -4391 1074 144 0 0 chr18 25023465 25023645 -60965289 + (TA)n Simple_repeat Simple_repeat 1 180 0 2307 81 7 0 chr18 25023646 25023941 -60964993 - AluY SINE Alu -14 297 1 4329 204 41 25 chr18 25023941 25025050 -60963884 + L1M2c LINE L1 2396 3548 -3240 1034 165 5 25 chr18 25025828 25026028 -60962906 - L1PA16 LINE L1 -10 6156 5961 5400 169 42 22 chr18 25026087 25026166 -60962768 + L1MA5A LINE L1 4316 4392 -1905 252 0 0 0 chr18 25026166 25026194 -60962740 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 5400 169 42 22 chr18 25026194 25027111 -60961823 + L1MA5A LINE L1 4392 5290 -1007 1468 217 6 25 chr18 25027111 25027425 -60961509 + AluJo SINE Alu 1 308 -4 5400 169 42 22 chr18 25027425 25028350 -60960584 + L1MA5A LINE L1 5290 6280 -17 1002 234 82 22 chr18 25028575 25029045 -60959889 + L1MDa LINE L1 2192 2685 -3855 436 274 156 8 chr18 25029043 25029280 -60959654 + L1M2c LINE L1 3657 3928 -2860 * 458 180 45 63 chr18 25029280 25029391 -60959543 - AluSg/x SINE Alu -41 271 163 * 544 187 0 0 chr18 25029386 25029477 -60959457 + AluJb SINE Alu 192 282 -30 1889 239 37 93 chr18 25029499 25030170 -60958764 + L1M2c LINE L1 3984 4593 -2195 781 127 0 8 chr18 25030170 25030288 -60958646 + FLAM_C SINE Alu 1 117 -16 1889 239 37 93 chr18 25030288 25030518 -60958416 + L1M2c LINE L1 4593 4834 -1954 892 203 93 38 chr18 25030514 25030804 -60958130 - L1M4 LINE L1 -936 5210 4905 * 1936 132 14 0 chr18 25030804 25031093 -60957841 - AluSx SINE Alu -19 293 1 1229 155 147 0 chr18 25031152 25031384 -60957550 - MER67A LTR ERV1 -277 266 1 1667 264 60 33 chr18 25031384 25032051 -60956883 - L1M4 LINE L1 -1254 4892 4208 1853 147 102 6 chr18 25032741 25033074 -60955860 - MLT1A1 LTR MaLR 0 365 1 265 325 0 43 chr18 25033823 25033940 -60954994 + MIR SINE MIR 58 169 -93 21 36 0 0 chr18 25034522 25034550 -60954384 + AT_rich Low_complexity Low_complexity 1 28 0 182 284 172 9 chr18 25034959 25035075 -60953859 + L2 LINE L2 3160 3294 -19 2491 63 0 0 chr18 25035150 25035452 -60953482 + AluY SINE Alu 1 302 -9 573 248 67 14 chr18 25035918 25036128 -60952806 - L1ME LINE L1 -297 5824 5604 1568 170 25 11 chr18 25036461 25036737 -60952197 - AluJb SINE Alu -30 282 3 325 279 216 15 chr18 25036883 25037087 -60951847 - L1ME LINE L1 -2213 5595 5351 691 225 107 0 chr18 25037544 25037731 -60951203 + MER3 DNA MER1_type 1 207 -2 950 170 82 0 chr18 25037809 25038003 -60950931 - L1MB2 LINE L1 -39 6132 5923 855 128 8 8 chr18 25038012 25038145 -60950789 - FLAM_C SINE Alu 0 133 1 2298 103 3 0 chr18 25038185 25038487 -60950447 + AluSx SINE Alu 1 303 -9 524 285 145 14 chr18 25038828 25039042 -60949892 + MIR SINE MIR 8 249 -13 1227 207 63 35 chr18 25039514 25039833 -60949101 - MER2 DNA MER2_type -1 344 17 265 325 0 43 chr18 25040644 25040761 -60948173 + MIR SINE MIR 58 169 -93 21 36 0 0 chr18 25041343 25041371 -60947563 + AT_rich Low_complexity Low_complexity 1 28 0 182 284 172 9 chr18 25041780 25041896 -60947038 + L2 LINE L2 3160 3294 -19 2465 60 3 0 chr18 25041974 25042273 -60946661 + AluY SINE Alu 3 302 -9 573 248 67 14 chr18 25042737 25042947 -60945987 - L1MB2 LINE L1 -297 5824 5604 867 181 0 47 chr18 25043397 25043590 -60945344 - AluJo SINE Alu -126 186 3 312 280 242 21 chr18 25043753 25043939 -60944995 - L1MB2 LINE L1 -543 5578 5352 486 253 82 16 chr18 25044397 25044591 -60944343 + MER3 DNA MER1_type 1 207 -2 795 206 82 0 chr18 25044671 25044865 -60944069 - L1MB2 LINE L1 -39 6132 5923 851 128 8 8 chr18 25044875 25045008 -60943926 - FLAM_C SINE Alu 0 133 1 2209 108 7 0 chr18 25045048 25045345 -60943589 + AluSx SINE Alu 1 299 -13 1658 133 34 34 chr18 25045354 25045647 -60943287 + AluSx SINE Alu 1 293 -19 1935 166 0 13 chr18 25045875 25046176 -60942758 - AluSx SINE Alu -12 300 4 1347 156 19 59 chr18 25046181 25046374 -60942560 - AluJb SINE Alu -1 311 133 1429 135 0 45 chr18 25046374 25046685 -60942249 + AluY SINE Alu 5 301 -10 1347 156 19 59 chr18 25046685 25046798 -60942136 - AluJb SINE Alu -179 133 17 192 438 0 0 chr18 25046800 25046864 -60942070 - L2 LINE L2 -27 3245 3182 325 220 55 0 chr18 25046897 25046988 -60941946 - HAL1b LINE L1 0 1348 1253 212 284 105 11 chr18 25046995 25047090 -60941844 + L3 LINE CR1 795 898 -679 337 330 174 11 chr18 25047186 25047537 -60941397 + L3 LINE CR1 1163 1570 -7 932 194 31 47 chr18 25048254 25048602 -60940332 - L1MEc LINE L1 -1614 4601 4295 1647 183 38 15 chr18 25048626 25048979 -60939955 + Tigger7 DNA MER2_type 37 2328 -159 803 143 27 0 chr18 25049006 25049153 -60939781 + Tigger7 DNA MER2_type 2311 2461 -30 3052 227 47 56 chr18 25049155 25050107 -60938827 - L1MEc LINE L1 -1917 4298 3356 2158 119 0 7 chr18 25050107 25050402 -60938532 - AluSx SINE Alu -19 293 1 3052 227 47 56 chr18 25050402 25050552 -60938382 - L1MEc LINE L1 -2859 3356 3206 23 54 0 0 chr18 25050941 25050978 -60937956 + AT_rich Low_complexity Low_complexity 1 37 0 1648 93 27 0 chr18 25051568 25051793 -60937141 + AluSq SINE Alu 69 299 -14 3210 222 86 26 chr18 25052641 25053060 -60935874 - L1MEc LINE L1 -2952 3263 2870 591 61 0 24 chr18 25053060 25053142 -60935792 + MADE1 DNA Mariner 1 80 0 3210 222 86 26 chr18 25053142 25054008 -60934926 - L1MEc LINE L1 -3345 2870 1935 417 39 0 0 chr18 25054008 25054059 -60934875 + (TG)n Simple_repeat Simple_repeat 2 52 0 3210 222 86 26 chr18 25054059 25054107 -60934827 - L1MEc LINE L1 -4280 1935 1891 2308 96 0 0 chr18 25054146 25054439 -60934495 + AluSc SINE Alu 1 293 -16 926 171 6 6 chr18 25054875 25055051 -60933883 + AluJb SINE Alu 128 303 -9 2334 108 0 0 chr18 25056485 25056792 -60932142 - AluSx SINE Alu -5 307 1 1909 154 3 3 chr18 25057270 25057575 -60931359 - AluSx SINE Alu -7 305 1 206 162 0 0 chr18 25057672 25057709 -60931225 + L3b LINE CR1 1355 1391 -192 732 123 9 0 chr18 25057786 25057892 -60931042 - U6 snRNA snRNA 0 107 1 191 345 0 0 chr18 25058009 25058064 -60930870 + L3b LINE CR1 1475 1529 -54 354 191 0 48 chr18 25058219 25058303 -60930631 - MER116 DNA Mariner 0 80 1 455 310 56 0 chr18 25058367 25058509 -60930425 - MIR SINE MIR -50 212 63 2531 192 30 48 chr18 25058679 25059180 -60929754 - MLT2B3 LTR ERVL -62 492 1 347 268 197 22 chr18 25059205 25059463 -60929471 - L1MC/D LINE L1 -370 5751 5462 247 322 112 13 chr18 25060585 25060889 -60928045 + HAL1 LINE L1 813 1146 -1361 645 273 142 11 chr18 25060913 25061188 -60927746 + MLT2F LTR ERVL 1 311 -352 321 370 7 7 chr18 25061347 25061485 -60927449 + ERVL LTR ERVL 23 160 -5604 694 334 75 21 chr18 25061584 25061922 -60927012 + ERVL LTR ERVL 286 662 -5034 639 258 39 33 chr18 25061946 25062128 -60926806 + ERVL LTR ERVL 763 945 -4819 945 288 26 23 chr18 25062166 25062517 -60926417 + ERVL LTR ERVL 1032 1383 -4381 2946 276 82 13 chr18 25062866 25064174 -60924760 + ERVL LTR ERVL 1385 2843 -2921 2304 63 31 0 chr18 25064174 25064461 -60924473 + AluY SINE Alu 1 296 -15 2946 276 82 13 chr18 25064461 25064684 -60924250 + ERVL LTR ERVL 2843 3049 -2715 36 82 0 0 chr18 25064928 25065013 -60923921 + AT_rich Low_complexity Low_complexity 1 85 0 328 216 78 20 chr18 25065032 25065134 -60923800 - L1ME LINE L1 -538 5583 5476 195 42 0 0 chr18 25065246 25065270 -60923664 + (TTCA)n Simple_repeat Simple_repeat 2 25 0 6763 195 46 17 chr18 25066401 25068833 -60920101 - L1MB7 LINE L1 -16 6168 3476 1918 204 131 26 chr18 25070073 25070645 -60918289 - L1ME2 LINE L1 -2 6231 5600 * 3179 217 69 18 chr18 25070641 25071731 -60917203 - L1ME2 LINE L1 -942 5273 4129 724 214 202 4 chr18 25071765 25072032 -60916902 - L1ME2 LINE L1 -3127 3088 2769 722 235 74 99 chr18 25072028 25072514 -60916420 - L1ME2 LINE L1 -3711 2504 2008 * 1980 143 0 0 chr18 25072514 25072800 -60916134 - AluJb SINE Alu -26 286 1 722 235 74 99 chr18 25072800 25072930 -60916004 - L1ME2 LINE L1 -4207 2008 1876 2260 75 7 0 chr18 25072930 25073256 -60915678 + AluSp SINE Alu 1 328 0 722 235 74 99 chr18 25073256 25073485 -60915449 - L1ME2 LINE L1 -4339 1876 1726 457 310 211 25 chr18 25074570 25075125 -60913809 - L2 LINE L2 -447 2867 2210 522 198 0 0 chr18 25076260 25076356 -60912578 - MIR SINE MIR -71 191 96 220 243 14 54 chr18 25076381 25076455 -60912479 + L2 LINE L2 3181 3251 -21 231 114 0 0 chr18 25077166 25077201 -60911733 + (TTC)n Simple_repeat Simple_repeat 2 36 0 1394 234 140 10 chr18 25077909 25078409 -60910525 - L1ME3A LINE L1 -8 6162 5598 1650 157 0 12 chr18 25078556 25078811 -60910123 - AluSx SINE Alu -17 295 44 282 301 115 18 chr18 25079867 25079980 -60908954 - L2 LINE L2 -3 3269 3146 478 276 41 72 chr18 25080250 25080291 -60908643 + MIR SINE MIR 1 42 -220 2360 95 13 0 chr18 25080291 25080597 -60908337 - AluSx SINE Alu -2 310 1 478 276 41 72 chr18 25080597 25080776 -60908158 + MIR SINE MIR 42 214 -48 514 226 8 0 chr18 25080878 25081002 -60907932 - L1MA10 LINE L1 -24 6310 6186 202 316 22 44 chr18 25081016 25081152 -60907782 - L2 LINE L2 -610 2704 2572 187 329 68 0 chr18 25081181 25081254 -60907680 + L2 LINE L2 3209 3286 -27 24 0 0 0 chr18 25083144 25083168 -60905766 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr18 25083443 25083480 -60905454 + AT_rich Low_complexity Low_complexity 1 37 0 352 291 26 17 chr18 25083631 25083748 -60905186 + Charlie8 DNA MER1_type 113 230 -2187 1800 129 18 4 chr18 25083838 25084110 -60904824 + AluJo SINE Alu 16 291 -21 2093 128 0 3 chr18 25084113 25084402 -60904532 + AluSg SINE Alu 1 288 -22 204 40 0 0 chr18 25084403 25084428 -60904506 + (TG)n Simple_repeat Simple_repeat 2 26 0 1641 171 7 7 chr18 25084617 25084891 -60904043 - AluJo SINE Alu -34 278 5 2419 97 3 0 chr18 25084903 25085252 -60903682 - AluSx SINE Alu 0 350 1 478 270 86 0 chr18 25086263 25086415 -60902519 + MIR SINE MIR 47 211 -51 213 250 0 21 chr18 25086387 25086435 -60902499 - MIR SINE MIR -18 244 198 * 1379 118 70 41 chr18 25086467 25086737 -60902197 - Tigger3(Golem) DNA MER2_type 0 3038 2761 2398 93 0 0 chr18 25086821 25087123 -60901811 - AluSx SINE Alu -10 302 1 358 180 271 0 chr18 25088377 25088499 -60900435 - L1ME4a LINE L1 -1 6120 5966 1134 192 126 71 chr18 25089256 25089694 -60899240 - MLT1C LTR MaLR 0 467 6 258 271 129 12 chr18 25091162 25091247 -60897687 - L3 LINE CR1 -36 1541 1447 300 216 41 62 chr18 25091369 25091466 -60897468 - MIR SINE MIR -4 258 164 813 249 97 50 chr18 25091472 25091655 -60897279 + MLT1J2 LTR MaLR 2 175 -275 1921 166 3 0 chr18 25091655 25091951 -60896983 - AluJb SINE Alu -13 299 3 813 249 97 50 chr18 25091951 25092149 -60896785 + MLT1J2 LTR MaLR 175 401 -49 352 358 53 20 chr18 25092204 25092355 -60896579 - MIR SINE MIR -105 157 2 366 355 49 38 chr18 25092373 25092638 -60896296 - L3 LINE CR1 -282 1295 1028 410 205 13 0 chr18 25092720 25092798 -60896136 + MER5A DNA MER1_type 14 92 -97 1222 139 0 0 chr18 25092798 25092970 -60895964 - AluSg/x SINE Alu -16 296 125 255 61 0 0 chr18 25092971 25093004 -60895930 + (TG)n Simple_repeat Simple_repeat 2 34 0 457 310 211 25 chr18 25093408 25093963 -60894971 - L2 LINE L2 -447 2867 2210 522 198 0 0 chr18 25095098 25095194 -60893740 - MIR SINE MIR -71 191 96 220 243 14 54 chr18 25095219 25095293 -60893641 + L2 LINE L2 3181 3251 -21 216 158 0 0 chr18 25096004 25096042 -60892892 + T-rich Low_complexity Low_complexity 1 38 0 1394 234 140 10 chr18 25096750 25097250 -60891684 - L1ME3A LINE L1 -8 6162 5598 2342 98 0 0 chr18 25097397 25097692 -60891242 - AluSx SINE Alu -17 295 1 358 180 271 0 chr18 25098945 25099067 -60889867 - L1ME4a LINE L1 -1 6120 5966 1128 187 128 75 chr18 25099824 25100263 -60888671 - MLT1C LTR MaLR 0 467 6 258 271 129 12 chr18 25101731 25101816 -60887118 - L3 LINE CR1 -36 1541 1447 300 216 41 62 chr18 25101938 25102035 -60886899 - MIR SINE MIR -4 258 164 813 249 97 50 chr18 25102041 25102224 -60886710 + MLT1J2 LTR MaLR 2 175 -275 1921 166 3 0 chr18 25102224 25102520 -60886414 - AluJb SINE Alu -13 299 3 813 249 97 50 chr18 25102520 25102718 -60886216 + MLT1J2 LTR MaLR 175 401 -49 352 358 53 20 chr18 25102773 25102924 -60886010 - MIR SINE MIR -105 157 2 378 351 49 38 chr18 25102942 25103207 -60885727 - L3 LINE CR1 -282 1295 1028 410 205 13 0 chr18 25103289 25103367 -60885567 + MER5A DNA MER1_type 14 92 -97 1191 133 0 0 chr18 25103367 25103532 -60885402 - AluSg/x SINE Alu -16 296 132 237 65 0 0 chr18 25103539 25103570 -60885364 + (TG)n Simple_repeat Simple_repeat 2 32 0 373 278 0 0 chr18 25103570 25103660 -60885274 - L1MC4 LINE L1 -1339 6703 6614 335 311 0 0 chr18 25103606 25103696 -60885238 + L1MC4 LINE L1 6614 6703 -1339 * 1343 161 114 61 chr18 25103703 25103837 -60885097 - AluJb SINE Alu -17 295 170 2010 141 3 13 chr18 25103837 25104150 -60884784 - AluSx SINE Alu -2 310 1 1343 161 114 61 chr18 25104150 25104295 -60884639 - AluJb SINE Alu -142 170 1 227 228 291 0 chr18 25104295 25104374 -60884560 + MER5A DNA MER1_type 81 182 -7 739 266 66 90 chr18 25104406 25104741 -60884193 - L3 LINE CR1 -737 840 514 494 202 10 0 chr18 25104883 25104987 -60883947 + MLT1B LTR MaLR 1 105 -285 575 134 75 75 chr18 25105105 25105239 -60883695 + Tigger3(Golem) DNA MER2_type 2905 3038 0 213 250 0 21 chr18 25105271 25105319 -60883615 + MIR SINE MIR 198 244 -18 * 478 270 86 0 chr18 25105291 25105443 -60883491 - MIR SINE MIR -51 211 47 2201 111 0 0 chr18 25106454 25106743 -60882191 + AluSx SINE Alu 1 289 -23 28 0 0 0 chr18 25106745 25106773 -60882161 + AT_rich Low_complexity Low_complexity 1 28 0 222 37 0 0 chr18 25106933 25106960 -60881974 + (GA)n Simple_repeat Simple_repeat 2 28 0 2112 96 3 51 chr18 25107471 25107783 -60881151 + AluSx SINE Alu 1 297 -15 442 103 0 0 chr18 25108778 25108836 -60880098 + AluSg/x SINE Alu 190 247 -65 242 29 29 0 chr18 25108842 25108877 -60880057 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 206 200 55 73 chr18 25109051 25109106 -60879828 - L2 LINE L2 -1 3271 3218 28 0 0 0 chr18 25109754 25109782 -60879152 + AT_rich Low_complexity Low_complexity 1 28 0 187 211 0 0 chr18 25113039 25113077 -60875857 - L2 LINE L2 -1 3312 3275 2400 134 41 16 chr18 25115261 25115700 -60873234 - Tigger2 DNA MER2_type 0 2718 2269 414 159 0 0 chr18 25115686 25115755 -60873179 - Tigger2 DNA MER2_type -2649 69 1 * 328 226 60 12 chr18 25116704 25116788 -60872146 + MER5A DNA MER1_type 17 104 -85 535 310 16 22 chr18 25116859 25117043 -60871891 - MIR SINE MIR -70 192 10 502 249 259 0 chr18 25117323 25117528 -60871406 + MIR SINE MIR 5 262 0 2451 79 0 3 chr18 25117917 25118221 -60870713 - AluSq SINE Alu -10 303 1 1022 94 88 6 chr18 25118461 25118631 -60870303 + L1PBa LINE L1 2203 2386 -4477 195 42 0 0 chr18 25118735 25118759 -60870175 + (A)n Simple_repeat Simple_repeat 1 24 0 2300 98 7 13 chr18 25119686 25119992 -60868942 - AluSx SINE Alu -7 305 2 201 293 0 57 chr18 25120281 25120387 -60868547 + GA-rich Low_complexity Low_complexity 3 102 0 1317 78 28 17 chr18 25121374 25121553 -60867381 + THE1B LTR MaLR 1 181 -183 2409 93 0 3 chr18 25121557 25121858 -60867076 + AluSp SINE Alu 1 300 -13 1975 145 7 0 chr18 25121961 25122250 -60866684 - AluSx SINE Alu -21 291 1 22 0 0 0 chr18 25122482 25122504 -60866430 + AT_rich Low_complexity Low_complexity 1 22 0 2150 123 3 0 chr18 25122546 25122839 -60866095 + AluSx SINE Alu 1 294 -18 193 289 66 13 chr18 25123267 25123343 -60865591 + MIR SINE MIR 72 151 -111 246 272 26 35 chr18 25123931 25124045 -60864889 - L1ME4a LINE L1 -65 6056 5944 256 311 93 42 chr18 25124947 25125140 -60863794 - MIR SINE MIR -29 233 31 652 117 109 0 chr18 25125418 25125546 -60863388 + L1MA5 LINE L1 6159 6300 0 26 30 0 0 chr18 25125546 25125579 -60863355 + AT_rich Low_complexity Low_complexity 1 33 0 196 269 0 0 chr18 25125869 25125921 -60863013 + L2 LINE L2 3261 3312 -1 180 0 0 0 chr18 25126219 25126239 -60862695 + (GA)n Simple_repeat Simple_repeat 1 20 0 489 240 186 6 chr18 25127016 25127199 -60861735 - L1ME2 LINE L1 -77 6087 5872 1270 181 0 28 chr18 25127330 25127578 -60861356 + AluJo SINE Alu 59 299 -13 783 163 91 91 chr18 25127702 25127760 -60861174 - MER3 DNA MER1_type 0 209 152 2331 78 3 0 chr18 25127760 25128065 -60860869 - AluSq SINE Alu 0 306 1 783 163 91 91 chr18 25128065 25128214 -60860720 - MER3 DNA MER1_type -56 153 1 288 288 47 90 chr18 25128531 25128764 -60860170 + L2 LINE L2 3034 3256 -16 1962 131 0 24 chr18 25128767 25129081 -60859853 + AluSx SINE Alu 1 307 0 1888 160 7 14 chr18 25129092 25129385 -60859549 + AluJo SINE Alu 3 293 -19 598 278 79 4 chr18 25129838 25130065 -60858869 - MLT1L LTR MaLR -26 589 346 1677 137 0 97 chr18 25130279 25130418 -60858516 + AluJo SINE Alu 4 96 -216 1779 134 40 7 chr18 25130418 25130694 -60858240 + AluJb SINE Alu 1 285 -27 1677 137 0 97 chr18 25130694 25130875 -60858059 + AluJo SINE Alu 96 293 -19 219 88 0 0 chr18 25131421 25131455 -60857479 + (TG)n Simple_repeat Simple_repeat 2 35 0 888 178 0 0 chr18 25132458 25132600 -60856334 + AluJb SINE Alu 3 145 -164 2627 44 0 0 chr18 25132600 25132897 -60856037 + AluY SINE Alu 1 297 -14 1620 193 3 13 chr18 25134503 25134814 -60854120 - AluJo SINE Alu -4 308 1 900 146 0 15 chr18 25134814 25134951 -60853983 - AluJo SINE Alu -177 135 1 1394 164 84 0 chr18 25136231 25136530 -60852404 + MER33 DNA MER1_type 1 324 0 319 177 51 0 chr18 25137911 25137990 -60850944 + MER5B DNA MER1_type 19 101 -77 249 33 0 0 chr18 25138178 25138208 -60850726 + (TG)n Simple_repeat Simple_repeat 1 30 0 730 197 0 8 chr18 25138640 25138772 -60850162 + MER115 DNA AcHobo 563 693 0 2049 157 0 3 chr18 25140548 25140861 -60848073 - AluJo SINE Alu 0 312 1 246 49 219 0 chr18 25141038 25141079 -60847855 - MADE1 DNA Mariner 0 80 31 2032 103 10 10 chr18 25141082 25141384 -60847550 + L1MA2 LINE L1 5999 6300 -4 204 256 12 49 chr18 25142105 25142187 -60846747 - MIR SINE MIR -87 175 97 1548 138 110 0 chr18 25142295 25142597 -60846337 - AluJb SINE Alu 0 330 1 1750 169 21 3 chr18 25142696 25142980 -60845954 - AluJb SINE Alu -19 293 5 258 242 16 0 chr18 25142999 25143061 -60845873 - MER5B DNA MER1_type -81 97 35 2209 109 0 7 chr18 25143896 25144189 -60844745 + AluSx SINE Alu 1 291 -21 290 148 0 37 chr18 25144246 25144300 -60844634 + L2 LINE L2 3262 3313 0 547 207 63 0 chr18 25145408 25145519 -60843415 + FLAM_C SINE Alu 2 119 -24 233 307 139 0 chr18 25148637 25148738 -60840196 + MIR SINE MIR 78 192 -70 1917 104 11 0 chr18 25148738 25148998 -60839936 + AluSx SINE Alu 1 263 -49 232 211 53 0 chr18 25149664 25149721 -60839213 + MIR SINE MIR 116 175 -87 201 289 78 44 chr18 25149774 25149864 -60839070 - MIR SINE MIR -64 198 106 180 0 0 0 chr18 25151181 25151201 -60837733 + (CA)n Simple_repeat Simple_repeat 1 20 0 2335 112 0 0 chr18 25151380 25151692 -60837242 + AluSx SINE Alu 1 312 0 197 368 72 0 chr18 25152827 25152952 -60835982 + MIR3 SINE MIR 50 183 -25 718 195 63 40 chr18 25153042 25153216 -60835718 + MER5B DNA MER1_type 1 178 0 244 313 62 0 chr18 25153753 25153817 -60835117 + L2 LINE L2 3199 3266 -47 2247 104 3 0 chr18 25154170 25154457 -60834477 - AluSg SINE Alu -18 292 5 726 195 9 68 chr18 25154573 25154794 -60834140 + L1MC5 LINE L1 7724 7931 -30 207 0 0 0 chr18 25154887 25154910 -60834024 + (A)n Simple_repeat Simple_repeat 1 23 0 269 252 140 19 chr18 25156585 25156692 -60832242 + MIR SINE MIR 31 150 -112 25 31 0 0 chr18 25157777 25157809 -60831125 + AT_rich Low_complexity Low_complexity 1 32 0 702 312 107 47 chr18 25158671 25159072 -60829862 + L1ME4a LINE L1 3915 4291 -2078 2372 97 0 3 chr18 25159072 25159382 -60829552 - AluSq SINE Alu -4 309 1 702 312 107 47 chr18 25159382 25160586 -60828348 + L1ME4a LINE L1 4291 5620 -749 312 296 75 39 chr18 25160591 25160926 -60828008 + L1ME4a LINE L1 5656 6002 -119 2756 59 25 3 chr18 25161347 25161740 -60827194 - L1PA10 LINE L1 0 6168 5792 28 29 0 0 chr18 25162515 25162550 -60826384 + AT_rich Low_complexity Low_complexity 1 35 0 546 311 39 70 chr18 25162715 25163155 -60825779 + L2 LINE L2 2279 2704 -610 1138 189 65 12 chr18 25163155 25163403 -60825531 - L1MD1 LINE L1 -5 6237 5977 1897 150 114 6 chr18 25163482 25163928 -60825006 - LTR64 LTR ERVK 0 558 1 599 288 99 32 chr18 25164257 25164629 -60824305 - MLT1L LTR MaLR -2 613 217 186 200 55 73 chr18 25164766 25164821 -60824113 + L2 LINE L2 3218 3271 -1 242 29 29 0 chr18 25164995 25165030 -60823904 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 439 103 0 0 chr18 25165036 25165094 -60823840 - AluSc SINE Alu -64 245 188 2133 93 3 51 chr18 25166088 25166400 -60822534 - AluSx SINE Alu -15 297 1 222 37 0 0 chr18 25166911 25166938 -60821996 + (TC)n Simple_repeat Simple_repeat 2 28 0 28 0 0 0 chr18 25167098 25167126 -60821808 + AT_rich Low_complexity Low_complexity 1 28 0 2220 111 3 0 chr18 25167128 25167416 -60821518 - AluSx SINE Alu -23 289 1 1742 153 11 11 chr18 25167424 25167706 -60821228 - AluJo SINE Alu -22 290 9 365 267 34 7 chr18 25167747 25167893 -60821041 - L1ME4a LINE L1 -11 6110 5961 320 298 64 6 chr18 25168021 25168192 -60820742 - L1MC5 LINE L1 -520 7441 7261 983 190 38 0 chr18 25168324 25168508 -60820426 - MER20 DNA MER1_type -25 194 4 228 189 19 19 chr18 25168713 25168766 -60820168 - MLT1K LTR MaLR -342 246 194 2175 110 7 0 chr18 25169566 25169857 -60819077 + AluSq SINE Alu 1 293 -20 2404 165 83 0 chr18 25170441 25170872 -60818062 + MLT1D LTR MaLR 39 505 0 2317 102 0 0 chr18 25171113 25171408 -60817526 + AluSq SINE Alu 1 295 -18 1477 145 153 0 chr18 25171514 25171776 -60817158 - AluJo SINE Alu 0 302 1 248 270 80 95 chr18 25172797 25172934 -60816000 + L3 LINE CR1 243 377 -1200 1256 76 0 13 chr18 25172959 25173116 -60815818 - AluSq SINE Alu -158 155 1 511 233 78 8 chr18 25174677 25174806 -60814128 + MIR SINE MIR 90 227 -35 234 0 0 0 chr18 25174840 25174866 -60814068 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 195 240 120 0 chr18 25175503 25175553 -60813381 - L2 LINE L2 -38 3234 3179 746 149 0 0 chr18 25175562 25175669 -60813265 + FLAM_A SINE Alu 1 107 -35 738 254 168 75 chr18 25175784 25176315 -60812619 - L2 LINE L2 -382 2932 2353 244 336 92 15 chr18 25176318 25176449 -60812485 - MIR SINE MIR -8 254 114 259 280 280 8 chr18 25178687 25178805 -60810129 + MIR SINE MIR 2 151 -111 28 0 0 0 chr18 25179399 25179427 -60809507 + AT_rich Low_complexity Low_complexity 1 28 0 205 211 0 0 chr18 25179600 25179638 -60809296 + T-rich Low_complexity Low_complexity 1 38 0 283 207 88 14 chr18 25180236 25180354 -60808580 - MLT1H1 LTR MaLR 0 595 265 486 247 59 55 chr18 25180438 25180657 -60808277 - MLT1H1 LTR MaLR -335 220 1 1796 124 43 4 chr18 25181674 25181847 -60807087 - AluSx SINE Alu 0 307 118 270 0 0 0 chr18 25181847 25181877 -60807057 + (TTA)n Simple_repeat Simple_repeat 2 31 0 1796 124 43 4 chr18 25181877 25181984 -60806950 - AluSx SINE Alu -189 118 17 1361 271 75 21 chr18 25182015 25182576 -60806358 - L1MC4 LINE L1 -291 7751 7161 2195 96 7 4 chr18 25182590 25182871 -60806063 + AluSc SINE Alu 1 282 -27 451 301 51 6 chr18 25183062 25183218 -60805716 - MIR SINE MIR 0 262 100 659 266 143 0 chr18 25184059 25184318 -60804616 - MER102b DNA MER1_type -8 333 38 520 272 92 0 chr18 25184320 25184504 -60804430 - L1MC4a LINE L1 -435 7373 7173 2209 100 10 3 chr18 25185187 25185476 -60803458 + AluSg SINE Alu 1 291 -19 391 292 74 60 chr18 25185679 25185895 -60803039 - MIR SINE MIR -38 224 6 740 175 0 29 chr18 25186100 25186237 -60802697 + FLAM_C SINE Alu 1 133 0 2087 82 4 11 chr18 25186258 25186526 -60802408 + AluSp SINE Alu 1 266 -47 1433 235 68 32 chr18 25186997 25187440 -60801494 + MLT1D LTR MaLR 14 472 -33 726 236 171 90 chr18 25187599 25187645 -60801289 - MLT1K LTR MaLR -2 586 545 1510 173 41 15 chr18 25187645 25187916 -60801018 + AluJo SINE Alu 14 291 -21 726 236 171 90 chr18 25187916 25188402 -60800532 - MLT1K LTR MaLR -43 545 11 2231 107 10 0 chr18 25188980 25189269 -60799665 - AluSg SINE Alu -18 292 1 2483 204 19 57 chr18 25190117 25190208 -60798726 - MER68 LTR ERV1 -4 558 465 1934 131 3 34 chr18 25190208 25190499 -60798435 + AluJo SINE Alu 1 282 -30 2483 204 19 57 chr18 25190499 25190986 -60797948 - MER68 LTR ERV1 -97 465 2 283 282 73 9 chr18 25191031 25191141 -60797793 - L3 LINE CR1 -58 1519 1403 255 254 94 30 chr18 25191273 25191388 -60797546 - MIR3 SINE MIR -42 166 49 617 263 31 7 chr18 25191446 25191821 -60797113 + MER113 DNA MER1_type? 31 479 -42 2435 79 0 13 chr18 25192098 25192414 -60796520 - AluSx SINE Alu 0 312 1 531 65 39 0 chr18 25192646 25192723 -60796211 - MADE1 DNA Mariner 0 80 1 290 284 246 8 chr18 25192942 25193076 -60795858 + MIR SINE MIR 18 183 -79 250 284 0 53 chr18 25193277 25193372 -60795562 + Charlie8 DNA MER1_type 16 105 -2312 2155 108 30 7 chr18 25193397 25193513 -60795421 + AluSx SINE Alu 1 113 -199 207 0 0 0 chr18 25193513 25193536 -60795398 + (TAA)n Simple_repeat Simple_repeat 2 24 0 2155 108 30 7 chr18 25193536 25193724 -60795210 + AluSx SINE Alu 113 312 0 358 232 91 0 chr18 25193828 25193927 -60795007 + MER5B DNA MER1_type 1 108 -70 183 139 0 0 chr18 25194663 25194699 -60794235 + (A)n Simple_repeat Simple_repeat 1 36 0 317 217 287 49 chr18 25195293 25195436 -60793498 + MER5A DNA MER1_type 12 188 -1 306 178 228 30 chr18 25195748 25195849 -60793085 - L2 LINE L2 -14 3299 3179 282 284 65 25 chr18 25196346 25196547 -60792387 + L1M4 LINE L1 3403 3611 -2535 305 300 97 41 chr18 25196674 25196871 -60792063 + L1M4 LINE L1 3808 4033 -2113 2123 117 3 16 chr18 25196871 25197180 -60791754 + AluSg SINE Alu 1 305 -5 305 300 97 41 chr18 25197180 25197322 -60791612 + L1M4 LINE L1 4033 4166 -1980 1699 160 0 28 chr18 25197336 25197623 -60791311 + AluJo SINE Alu 21 299 -13 1703 173 0 18 chr18 25197623 25197901 -60791033 + AluSp SINE Alu 1 273 -40 395 183 7 56 chr18 25197912 25198054 -60790880 + GA-rich Low_complexity Low_complexity 2 136 0 213 237 0 0 chr18 25198091 25198150 -60790784 + G-rich Low_complexity Low_complexity 1 59 0 23 0 0 0 chr18 25198345 25198368 -60790566 + GC_rich Low_complexity Low_complexity 1 23 0 29 61 0 0 chr18 25198502 25198535 -60790399 + GC_rich Low_complexity Low_complexity 1 33 0 466 304 145 5 chr18 25200543 25200757 -60788177 + MIR SINE MIR 13 256 -6 2573 59 0 28 chr18 25200773 25201093 -60787841 - AluY SINE Alu 0 311 1 299 245 20 20 chr18 25201257 25201355 -60787579 - LTR67 LTR ERVL 0 557 460 2357 104 0 0 chr18 25201741 25202039 -60786895 + AluSq SINE Alu 1 298 -15 268 247 134 10 chr18 25202076 25202173 -60786761 + MIR3 SINE MIR 81 189 -19 977 155 0 50 chr18 25202320 25202452 -60786482 - AluSg/x SINE Alu -7 305 183 5796 0 0 11 chr18 25202452 25203095 -60785839 + LTR27 LTR ERV1 1 636 0 977 155 0 50 chr18 25203095 25203143 -60785791 - AluSg/x SINE Alu -129 183 134 735 188 8 8 chr18 25203143 25203276 -60785658 - FLAM_C SINE Alu 0 133 1 24 0 0 0 chr18 25203285 25203309 -60785625 + AT_rich Low_complexity Low_complexity 1 24 0 2270 243 58 28 chr18 25203371 25204146 -60784788 - L1ME1 LINE L1 -5 6161 5364 684 319 109 17 chr18 25204358 25204937 -60783997 - L1ME3A LINE L1 -226 5944 5313 523 320 79 27 chr18 25204943 25205081 -60783853 - L1ME3A LINE L1 -925 5221 5092 2331 81 0 10 chr18 25205081 25205377 -60783557 + AluSg SINE Alu 1 293 -17 523 320 79 27 chr18 25205377 25205948 -60782986 - L1ME3A LINE L1 -1054 5092 4475 3790 108 19 42 chr18 25205949 25206594 -60782340 - MER41B LTR ERV1 0 635 6 2522 137 98 31 chr18 25206719 25207289 -60781645 - MER4B LTR ERV1 0 903 1 419 198 0 0 chr18 25207414 25207495 -60781439 - AluJ/FRAM SINE Alu -16 296 216 317 302 70 0 chr18 25207498 25207584 -60781350 - HAL1 LINE L1 -637 1870 1779 1229 156 14 47 chr18 25207590 25207802 -60781132 - AluJo SINE Alu -107 205 1 319 287 78 61 chr18 25207805 25208035 -60780899 - HAL1 LINE L1 -169 2338 2105 1808 157 0 14 chr18 25208178 25208496 -60780438 + AluJb SINE Alu 1 314 0 216 0 0 0 chr18 25208496 25208520 -60780414 + (CA)n Simple_repeat Simple_repeat 1 24 0 647 255 91 8 chr18 25208563 25208806 -60780128 - HAL1 LINE L1 -565 1942 1680 420 263 196 45 chr18 25208828 25209318 -60779616 - HAL1 LINE L1 -1942 565 2 649 294 43 75 chr18 25209394 25209924 -60779010 - MER34 LTR ERV1 -29 513 1 180 77 0 0 chr18 25210101 25210127 -60778807 + (TTTCC)n Simple_repeat Simple_repeat 2 27 0 180 200 0 0 chr18 25210181 25210221 -60778713 + C-rich Low_complexity Low_complexity 1 40 0 304 364 54 43 chr18 25210932 25211060 -60777874 + HAL1 LINE L1 1046 1171 -1336 2236 110 3 3 chr18 25211060 25211369 -60777565 + AluSg SINE Alu 2 310 0 304 364 54 43 chr18 25211369 25211520 -60777414 + HAL1 LINE L1 1171 1328 -1179 21 57 0 0 chr18 25212553 25212588 -60776346 + AT_rich Low_complexity Low_complexity 1 35 0 1977 118 0 56 chr18 25212622 25212943 -60775991 + AluSx SINE Alu 1 303 -9 333 203 101 0 chr18 25213044 25213123 -60775811 + L2 LINE L2 3187 3273 -40 44 35 0 0 chr18 25214148 25214206 -60774728 + AT_rich Low_complexity Low_complexity 1 58 0 2499 77 0 6 chr18 25214225 25214538 -60774396 - AluY SINE Alu 0 311 1 357 127 79 0 chr18 25214644 25214707 -60774227 + L1ME4a LINE L1 6039 6106 -15 378 259 12 0 chr18 25214978 25215063 -60773871 - MIR3 SINE MIR -12 196 111 310 306 89 67 chr18 25215690 25215870 -60773064 + MIR SINE MIR 52 235 -27 192 314 71 14 chr18 25216623 25216693 -60772241 - MIR SINE MIR -55 207 134 614 236 73 17 chr18 25218549 25218727 -60770207 - MER5A DNA MER1_type 0 189 2 686 254 110 72 chr18 25218785 25219214 -60769720 - Charlie8 DNA MER1_type -1935 482 38 426 254 84 35 chr18 25220344 25220486 -60768448 + MER112 DNA MER1_type 1 149 -111 647 160 134 17 chr18 25220788 25220907 -60768027 + AluJo SINE Alu 3 135 -177 1826 189 0 10 chr18 25220907 25221220 -60767714 + AluJo SINE Alu 1 310 -2 1231 29 7 0 chr18 25221285 25221421 -60767513 + AluY SINE Alu 1 137 -174 182 36 0 36 chr18 25221421 25221449 -60767485 + (TCTCCC)n Simple_repeat Simple_repeat 2 28 0 7089 69 6 28 chr18 25221453 25222987 -60765947 + SVA Other Other 2 1411 0 187 43 0 0 chr18 25222987 25223010 -60765924 + (CAAAA)n Simple_repeat Simple_repeat 2 180 0 1308 76 6 12 chr18 25223014 25223186 -60765748 + AluY SINE Alu 127 297 -14 259 296 83 19 chr18 25223527 25223635 -60765299 - MIR SINE MIR -128 134 20 257 338 30 8 chr18 25223839 25223972 -60764962 + MIR3 SINE MIR 46 181 -27 206 225 113 50 chr18 25225008 25225088 -60763846 + MIR3 SINE MIR 70 154 -54 859 229 0 17 chr18 25225404 25225583 -60763351 + L1ME LINE L1 5457 5632 -534 383 206 0 31 chr18 25225592 25225689 -60763245 + MER20B DNA MER1_type 3 96 -123 431 217 12 15 chr18 25226634 25226803 -60762131 + MER20B DNA MER1_type 3 219 0 1977 136 0 11 chr18 25226967 25227282 -60761652 + AluSx SINE Alu 1 312 0 207 204 0 0 chr18 25228043 25228092 -60760842 + (TG)n Simple_repeat Simple_repeat 1 49 0 668 168 16 8 chr18 25229349 25229474 -60759460 - AluSq/x SINE Alu -180 132 7 250 294 28 9 chr18 25229562 25229671 -60759263 - MIR SINE MIR -141 121 11 311 212 92 134 chr18 25230346 25230563 -60758371 + MIR SINE MIR 55 262 0 405 228 50 30 chr18 25230564 25230665 -60758269 + L2 LINE L2 3169 3271 -1 567 97 0 90 chr18 25231204 25231359 -60757575 + AluSc SINE Alu 29 169 -140 270 215 32 43 chr18 25234272 25234365 -60754569 + GA-rich Low_complexity Low_complexity 4 95 0 1813 176 77 3 chr18 25234365 25234705 -60754229 - MLT2D LTR ERVL -48 366 2 208 239 28 0 chr18 25236472 25236543 -60752391 + CT-rich Low_complexity Low_complexity 3 75 0 628 209 17 11 chr18 25239488 25239665 -60749269 - L1MB3 LINE L1 -85 6098 5921 242 209 38 29 chr18 25239665 25239770 -60749164 + MER20B DNA MER1_type 653 758 -25 * 316 182 0 0 chr18 25239769 25239824 -60749110 + AluSp/q SINE Alu 240 294 -9 2342 91 3 0 chr18 25240504 25240800 -60748134 + AluSg SINE Alu 9 305 -5 35 54 0 0 chr18 25240840 25240896 -60748038 + AT_rich Low_complexity Low_complexity 1 56 0 989 254 90 22 chr18 25241352 25241886 -60747048 - L1MC4a LINE L1 -1887 5921 5295 24 0 0 0 chr18 25242148 25242172 -60746762 + GC_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr18 25242188 25242208 -60746726 + (A)n Simple_repeat Simple_repeat 1 20 0 189 0 0 0 chr18 25242221 25242242 -60746692 + (T)n Simple_repeat Simple_repeat 1 21 0 51 17 0 0 chr18 25242248 25242306 -60746628 + AT_rich Low_complexity Low_complexity 1 58 0 22 0 0 0 chr18 25242306 25242328 -60746606 + GC_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr18 25242430 25242454 -60746480 + (A)n Simple_repeat Simple_repeat 1 24 0 260 265 12 24 chr18 25242666 25242749 -60746185 - MER3 DNA MER1_type -100 109 28 1742 178 0 0 chr18 25242886 25243172 -60745762 + AluJb SINE Alu 1 286 -26 2369 86 0 3 chr18 25243494 25243796 -60745138 - AluY SINE Alu -10 301 1 1664 196 74 26 chr18 25244164 25244541 -60744393 + MLT1D LTR MaLR 47 441 -64 1117 213 0 21 chr18 25244549 25244789 -60744145 + AluJo SINE Alu 58 292 -20 1904 135 71 0 chr18 25244817 25245099 -60743835 + AluSx SINE Alu 1 302 -10 989 284 122 27 chr18 25245476 25246172 -60742762 - L2 LINE L2 -246 3067 2303 397 341 100 22 chr18 25246200 25246611 -60742323 - L2 LINE L2 -723 2591 2149 463 314 113 0 chr18 25247350 25247579 -60741355 + MIR SINE MIR 8 262 0 217 150 0 25 chr18 25247717 25247757 -60741177 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 469 287 124 10 chr18 25248140 25248342 -60740592 + MIR SINE MIR 4 228 -34 1635 207 36 6 chr18 25250399 25250733 -60738201 - MER2 DNA MER2_type 0 344 1 2333 81 0 3 chr18 25251404 25251700 -60737234 + AluY SINE Alu 1 295 -16 2227 108 0 49 chr18 25252038 25252362 -60736572 + AluSg SINE Alu 1 308 -2 238 315 37 19 chr18 25252564 25252672 -60736262 + MIR SINE MIR 153 262 0 24 0 0 0 chr18 25253218 25253242 -60735692 + AT_rich Low_complexity Low_complexity 1 24 0 273 113 73 27 chr18 25255051 25255201 -60733733 + (TA)n Simple_repeat Simple_repeat 2 158 0 21 57 0 0 chr18 25255684 25255719 -60733215 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr18 25256960 25256991 -60731943 + AT_rich Low_complexity Low_complexity 1 31 0 376 343 8 2 chr18 25258013 25258160 -60730774 + MIR SINE MIR 25 170 -62 858 237 0 17 chr18 25258268 25258445 -60730489 + FAM SINE Alu 1 174 -1 225 94 0 0 chr18 25260530 25260562 -60728372 + (T)n Simple_repeat Simple_repeat 1 32 0 1552 199 48 102 chr18 25262446 25262968 -60725966 - L1ME2 LINE L1 -2 6162 5669 527 180 0 11 chr18 25262968 25263057 -60725877 - Tigger5 DNA MER2_type -2 2321 2234 315 309 216 8 chr18 25263629 25263985 -60724949 - L2 LINE L2 -48 3265 2836 324 0 0 0 chr18 25264892 25264928 -60724006 + (CA)n Simple_repeat Simple_repeat 1 36 0 954 96 0 7 chr18 25265770 25265906 -60723028 - Alu SINE Alu 0 310 176 2522 142 21 30 chr18 25267655 25268091 -60720843 + Tigger2a DNA MER2_type 1 432 -2 22 35 0 0 chr18 25269007 25269036 -60719898 + AT_rich Low_complexity Low_complexity 1 29 0 208 297 30 20 chr18 25269187 25269288 -60719646 - MER5A DNA MER1_type 0 189 88 330 365 24 6 chr18 25269586 25269756 -60719178 - MIR SINE MIR -70 192 20 201 189 57 0 chr18 25271319 25271372 -60717562 + A-rich Low_complexity Low_complexity 5 60 0 592 316 85 47 chr18 25271924 25272559 -60716375 + L2 LINE L2 1302 1960 -1354 240 214 0 0 chr18 25273244 25273300 -60715634 + (CA)n Simple_repeat Simple_repeat 1 56 0 28 0 0 0 chr18 25273998 25274026 -60714908 + AT_rich Low_complexity Low_complexity 1 28 0 321 141 0 0 chr18 25274563 25274625 -60714309 + MIR SINE MIR 105 167 -41 583 304 57 9 chr18 25274929 25275156 -60713778 - MIR SINE MIR -2 260 23 24 0 0 0 chr18 25275888 25275912 -60713022 + AT_rich Low_complexity Low_complexity 1 24 0 180 235 118 82 chr18 25276938 25277023 -60711911 + MIR SINE MIR 30 117 -91 23 0 0 0 chr18 25277174 25277197 -60711737 + AT_rich Low_complexity Low_complexity 1 23 0 1970 150 40 3 chr18 25277511 25277858 -60711076 - MER47A DNA MER2_type 0 366 7 21 0 0 0 chr18 25278015 25278036 -60710898 + AT_rich Low_complexity Low_complexity 1 21 0 431 280 140 27 chr18 25278046 25278196 -60710738 + MER91A DNA MER1_type 4 170 -26 302 241 89 0 chr18 25279240 25279319 -60709615 + Charlie7 DNA MER1_type 5 90 -2522 438 65 0 0 chr18 25279576 25279638 -60709296 + (TAGA)n Simple_repeat Simple_repeat 3 64 0 29 70 0 0 chr18 25280629 25280686 -60708248 + AT_rich Low_complexity Low_complexity 1 57 0 22 35 0 0 chr18 25280945 25280974 -60707960 + AT_rich Low_complexity Low_complexity 1 29 0 2089 119 32 32 chr18 25281505 25281817 -60707117 - AluSx SINE Alu 0 312 1 351 305 224 9 chr18 25283046 25283256 -60705678 - MIR SINE MIR -1 261 7 1053 130 81 5 chr18 25283782 25283967 -60704967 - MSTB LTR MaLR -227 199 1 986 241 129 120 chr18 25284648 25284803 -60704131 - MLT1F1 LTR MaLR 0 567 415 2252 77 0 48 chr18 25284803 25285113 -60703821 - AluY SINE Alu -10 301 7 986 241 129 120 chr18 25285113 25285372 -60703562 - MLT1F1 LTR MaLR -152 415 119 1952 154 4 0 chr18 25285372 25285651 -60703283 + AluSx SINE Alu 1 280 -32 986 241 129 120 chr18 25285651 25285770 -60703164 - MLT1F1 LTR MaLR -448 119 3 1785 164 20 64 chr18 25286041 25286449 -60702485 + MLT1B LTR MaLR 1 390 0 423 248 19 19 chr18 25287796 25287901 -60701033 - L2 LINE L2 0 3272 3168 239 253 142 56 chr18 25288011 25288173 -60700761 - LTR67 LTR ERVL -340 217 42 2898 256 141 24 chr18 25288204 25289335 -60699599 + L2 LINE L2 1625 2887 -427 2579 204 61 48 chr18 25289786 25289939 -60698995 - L1ME1 LINE L1 -14 6225 6076 321 105 0 0 chr18 25289939 25289996 -60698938 - L1MA10 LINE L1 -1 6333 6277 2579 204 61 48 chr18 25289996 25290284 -60698650 - L1ME1 LINE L1 -163 6076 5793 1817 160 55 0 chr18 25290284 25290577 -60698357 - AluSx SINE Alu -3 309 1 2579 204 61 48 chr18 25290577 25291127 -60697807 - L1ME1 LINE L1 -446 5793 5254 * 5214 256 79 21 chr18 25291112 25292259 -60696675 - L1ME1 LINE L1 -3005 3210 2131 1730 186 25 27 chr18 25292259 25292625 -60696309 - MLT1A1 LTR MaLR 0 365 1 5214 256 79 21 chr18 25292625 25292806 -60696128 - L1ME1 LINE L1 -4084 2131 1962 2527 168 27 5 chr18 25292806 25293253 -60695681 - MSTB2 LTR MaLR 0 457 1 5214 256 79 21 chr18 25293253 25294965 -60693969 - L1ME1 LINE L1 -4253 1962 35 1549 264 85 22 chr18 25294965 25295977 -60692957 - L1ME3A LINE L1 -203 5967 4890 309 325 147 5 chr18 25295986 25296177 -60692757 - MIR SINE MIR -13 249 32 834 227 21 46 chr18 25296482 25296604 -60692330 + MER5A DNA MER1_type 1 118 -71 1992 177 81 8 chr18 25296604 25296999 -60691935 - MSTA LTR MaLR 0 428 5 834 227 21 46 chr18 25296999 25297070 -60691864 + MER5A DNA MER1_type 118 189 0 211 330 43 53 chr18 25297278 25297372 -60691562 + L2 LINE L2 3090 3182 -90 272 279 54 101 chr18 25297631 25297760 -60691174 + L2 LINE L2 3145 3267 -5 487 299 72 70 chr18 25298131 25298476 -60690458 - L2 LINE L2 -493 2821 2476 265 273 92 128 chr18 25299915 25300164 -60688770 - L2 LINE L2 -1 3271 3032 237 295 105 0 chr18 25300502 25300597 -60688337 - L2 LINE L2 -8 3305 3201 304 255 146 14 chr18 25300828 25301040 -60687894 + L1ME4a LINE L1 5881 6120 -1 220 27 54 0 chr18 25301223 25301260 -60687674 + (TAAAA)n Simple_repeat Simple_repeat 1 39 0 404 284 43 43 chr18 25301488 25301667 -60687267 - MIR SINE MIR -24 184 17 306 50 0 0 chr18 25301957 25301997 -60686937 + (CA)n Simple_repeat Simple_repeat 1 40 0 213 94 0 0 chr18 25302803 25302835 -60686099 + (T)n Simple_repeat Simple_repeat 1 32 0 297 227 94 47 chr18 25303763 25303891 -60685043 + MIR3 SINE MIR 3 136 -72 290 254 44 44 chr18 25304321 25304435 -60684499 + LTR16A1 LTR ERVL 180 293 -164 380 137 41 0 chr18 25304435 25304508 -60684426 + L1P5 LINE L1 5716 5791 -365 326 303 0 0 chr18 25304515 25304604 -60684330 - L1MC4 LINE L1 -1339 6703 6615 1786 187 3 19 chr18 25304604 25304983 -60683951 + L1PB4 LINE L1 5782 6154 -2 274 284 67 10 chr18 25305173 25305278 -60683656 + MIR SINE MIR 40 149 -64 2245 116 3 6 chr18 25305287 25305598 -60683336 + AluSx SINE Alu 1 310 -2 1271 124 78 23 chr18 25306565 25306782 -60682152 + MER30 DNA MER1_type 2 230 0 689 312 149 34 chr18 25306898 25307389 -60681545 - L2 LINE L2 0 3313 2761 656 255 99 78 chr18 25307474 25307881 -60681053 + L2 LINE L2 2571 3020 -293 2278 104 0 0 chr18 25307881 25308188 -60680746 - AluSx SINE Alu -5 307 1 656 255 99 78 chr18 25308188 25308403 -60680531 + L2 LINE L2 3020 3229 -84 913 269 30 27 chr18 25308453 25308818 -60680116 + MLT1I LTR MaLR 38 403 -6 291 322 0 0 chr18 25308819 25308906 -60680028 + L2 LINE L2 3182 3268 -4 184 318 108 91 chr18 25309027 25309389 -60679545 - L2 LINE L2 -10 3262 2895 608 264 13 123 chr18 25309405 25309535 -60679399 + MIR SINE MIR 35 129 -133 1955 136 3 0 chr18 25309535 25309821 -60679113 + AluJb SINE Alu 1 287 -25 608 264 13 123 chr18 25309821 25309925 -60679009 + MIR SINE MIR 129 243 -19 334 375 120 18 chr18 25310031 25310415 -60678519 - L2 LINE L2 -563 2751 2329 659 253 64 54 chr18 25310460 25310757 -60678177 + L2 LINE L2 3009 3308 -5 261 0 0 0 chr18 25310857 25310886 -60678048 + (CA)n Simple_repeat Simple_repeat 2 30 0 2410 66 0 13 chr18 25310961 25311262 -60677672 + AluY SINE Alu 1 297 -14 333 328 21 38 chr18 25311357 25311543 -60677391 + L1MC4a LINE L1 4882 5064 -1082 281 179 53 53 chr18 25311885 25311974 -60676960 + L1MC4a LINE L1 5462 5553 -611 2193 125 43 39 chr18 25312045 25312595 -60676339 - MLT2A2 LTR ERVL 0 554 1 355 269 69 60 chr18 25312595 25312944 -60675990 + L1MC4a LINE L1 5607 5958 -1850 23 54 0 0 chr18 25313363 25313400 -60675534 + AT_rich Low_complexity Low_complexity 1 37 0 539 328 39 15 chr18 25314561 25314765 -60674169 - MIR SINE MIR -31 231 23 678 327 11 34 chr18 25316340 25316606 -60672328 - MIR SINE MIR 0 262 3 305 222 211 0 chr18 25317110 25317200 -60671734 + L2 LINE L2 3203 3311 -2 258 258 39 96 chr18 25317589 25317673 -60671261 - LTR33 LTR ERVL -2 519 432 2113 135 0 0 chr18 25317673 25317969 -60670965 + AluSx SINE Alu 2 297 -15 258 258 39 96 chr18 25317969 25318113 -60670821 - LTR33 LTR ERVL -89 432 304 249 348 77 70 chr18 25318130 25318389 -60670545 + L2 LINE L2 3012 3272 0 1592 211 10 3 chr18 25318535 25318838 -60670096 + AluJo SINE Alu 1 305 -7 208 303 226 7 chr18 25319137 25319292 -60669642 + MIR SINE MIR 71 259 -3 556 225 33 0 chr18 25319432 25319552 -60669382 + AluSg/x SINE Alu 138 261 -51 978 48 79 0 chr18 25319563 25319689 -60669245 + MER85 DNA T2_type 1 136 -3 227 356 140 25 chr18 25320514 25320750 -60668184 + L2 LINE L2 2804 3066 -206 5753 121 29 7 chr18 25320782 25321880 -60667054 - L1PA16 LINE L1 -9 6157 5042 259 292 88 24 chr18 25321934 25322068 -60666866 - MIR SINE MIR -7 201 53 2159 130 3 0 chr18 25322080 25322388 -60666546 + AluSx SINE Alu 4 312 0 196 167 19 111 chr18 25322937 25322991 -60665943 - MIR SINE MIR -63 145 97 230 267 13 0 chr18 25323743 25323818 -60665116 + (TA)n Simple_repeat Simple_repeat 2 77 0 334 143 0 24 chr18 25323851 25323935 -60664999 + (TA)n Simple_repeat Simple_repeat 1 82 0 2140 112 0 55 chr18 25323935 25324247 -60664687 - AluSg SINE Alu -14 296 2 24 0 0 0 chr18 25324249 25324273 -60664661 + AT_rich Low_complexity Low_complexity 1 24 0 547 303 128 39 chr18 25325322 25325781 -60663153 - L2 LINE L2 -9 3304 2805 263 288 98 23 chr18 25325804 25325936 -60662998 - L2 LINE L2 -647 2667 2526 236 304 0 65 chr18 25326489 25326581 -60662353 + L2 LINE L2 3187 3272 0 292 298 99 8 chr18 25327419 25327540 -60661394 + L2 LINE L2 3137 3268 -4 3450 122 4 0 chr18 25329386 25329868 -60659066 - L1PB2 LINE L1 -3 6148 5665 2267 166 87 17 chr18 25330145 25330614 -60658320 - MLT1D LTR MaLR 0 505 4 186 43 0 0 chr18 25330725 25330748 -60658186 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 694 204 9 0 chr18 25330750 25330863 -60658071 - FLAM_A SINE Alu -19 114 1 397 267 85 18 chr18 25331481 25331646 -60657288 - MIR SINE MIR -66 196 21 7355 55 26 0 chr18 25331860 25332912 -60656022 - L1PA7 LINE L1 0 6154 5086 5614 79 3 1 chr18 25332912 25333672 -60655262 + L1PA7 LINE L1 4323 5083 -1063 493 322 40 22 chr18 25333788 25334015 -60654919 + L2 LINE L2 2815 3045 -227 3559 178 29 5 chr18 25334394 25335070 -60653864 + L1MD1 LINE L1 5555 7994 -1 2315 98 3 0 chr18 25337138 25337433 -60651501 - AluSc SINE Alu -13 296 1 1685 209 111 12 chr18 25339113 25339538 -60649396 - MLT1C LTR MaLR 0 467 1 232 208 50 133 chr18 25339817 25339937 -60648997 - MER5A DNA MER1_type 0 189 80 506 229 0 0 chr18 25340652 25340748 -60648186 + Zaphod DNA AcHobo 3936 4031 0 269 240 155 39 chr18 25342274 25342403 -60646531 - MIR SINE MIR -32 230 87 301 293 161 29 chr18 25342466 25342640 -60646294 - MIR SINE MIR -24 238 42 240 355 0 19 chr18 25342685 25342792 -60646142 - MIR SINE MIR -155 107 3 779 313 87 34 chr18 25345597 25345728 -60643206 + L2 LINE L2 2569 2692 -621 2634 48 0 0 chr18 25345728 25346037 -60642897 + AluY SINE Alu 1 309 -2 779 313 87 34 chr18 25346037 25346611 -60642323 + L2 LINE L2 2692 3310 -3 225 0 0 0 chr18 25349308 25349333 -60639601 + (CACCC)n Simple_repeat Simple_repeat 3 27 0 223 259 0 35 chr18 25350850 25350908 -60638026 - MIR SINE MIR -28 234 179 182 214 48 0 chr18 25351283 25351325 -60637609 - MIR SINE MIR -115 147 104 874 254 35 4 chr18 25351526 25351758 -60637176 + LTR16C LTR ERVL 253 491 0 5980 122 31 25 chr18 25352022 25352985 -60635949 + LTR5 LTR ERVK 1 969 0 250 306 27 45 chr18 25353568 25353679 -60635255 + MIR SINE MIR 32 140 -68 219 276 0 57 chr18 25354191 25354296 -60634638 + T-rich Low_complexity Low_complexity 1 99 0 515 321 6 6 chr18 25354516 25354681 -60634253 - MIR SINE MIR -87 175 11 314 252 130 16 chr18 25354772 25354895 -60634039 + MIR3 SINE MIR 9 145 -63 392 280 37 9 chr18 25355230 25355337 -60633597 + L2 LINE L2 3161 3270 -2 248 380 14 58 chr18 25357012 25357220 -60631714 + L2 LINE L2 3094 3292 -21 2161 109 0 0 chr18 25357326 25357632 -60631302 + AluSx SINE Alu 1 306 0 228 35 0 0 chr18 25358561 25358590 -60630344 + (ATG)n Simple_repeat Simple_repeat 1 29 0 370 336 14 14 chr18 25359205 25359345 -60629589 - MER5A DNA MER1_type 0 189 50 626 238 96 71 chr18 25359628 25359951 -60628983 - L2 LINE L2 0 3313 2983 348 340 165 24 chr18 25360049 25360546 -60628388 - L2 LINE L2 -2492 822 256 3025 76 0 8 chr18 25361032 25361399 -60627535 + THE1B LTR MaLR 1 364 0 209 329 12 35 chr18 25361625 25361710 -60627224 - L2 LINE L2 0 3313 3231 202 211 0 28 chr18 25361715 25361786 -60627148 + (TA)n Simple_repeat Simple_repeat 2 70 0 444 248 83 8 chr18 25361929 25362050 -60626884 + L2 LINE L2 2662 2791 -523 601 229 46 64 chr18 25367489 25367707 -60621227 - MIR SINE MIR -5 257 44 363 23 0 0 chr18 25367843 25367887 -60621047 + (TG)n Simple_repeat Simple_repeat 2 45 0 196 283 38 0 chr18 25369476 25369529 -60619405 - MIR3 SINE MIR -54 154 100 356 238 50 40 chr18 25369550 25369651 -60619283 + MER102a DNA MER1_type 3 104 -226 334 318 54 7 chr18 25369693 25369841 -60619093 + MER102a DNA MER1_type 176 330 0 389 79 0 16 chr18 25370440 25370503 -60618431 + (TCC)n Simple_repeat Simple_repeat 1 62 0 283 371 33 20 chr18 25370802 25370953 -60617981 + MER5A DNA MER1_type 26 178 -11 335 250 0 0 chr18 25371508 25371584 -60617350 + MER116 DNA Mariner 1 76 -4 26 0 0 0 chr18 25371671 25371697 -60617237 + AT_rich Low_complexity Low_complexity 1 26 0 276 127 18 18 chr18 25371731 25371786 -60617148 - L1MB2 LINE L1 -2 6169 6115 1645 166 44 23 chr18 25371821 25371833 -60617101 - L1MB3 LINE L1 -40 6143 6133 2135 106 0 7 chr18 25371833 25372125 -60616809 - AluSc SINE Alu -19 290 1 1645 166 44 23 chr18 25372125 25372456 -60616478 - L1MB3 LINE L1 -50 6133 5793 572 332 77 45 chr18 25372570 25373236 -60615698 + L2 LINE L2 2031 2717 -597 441 251 126 37 chr18 25373560 25373751 -60615183 + MIR SINE MIR 15 222 -40 259 328 26 7 chr18 25374227 25374355 -60614579 + L2 LINE L2 2839 2966 -306 2883 109 0 5 chr18 25375322 25375698 -60613236 + THE1C LTR MaLR 1 374 -1 9903 112 44 44 chr18 25375699 25377297 -60611637 + THE1C-int LTR MaLR 1 1580 0 2928 106 0 11 chr18 25377297 25377676 -60611258 + THE1C LTR MaLR 1 375 0 412 234 63 46 chr18 25377844 25378019 -60610915 + LTR33A LTR ERVL 10 187 -336 2007 194 19 14 chr18 25378414 25378827 -60610107 - MLT1C LTR MaLR 0 467 53 290 265 105 31 chr18 25379172 25379334 -60609600 + HERVL LTR ERVL 418 591 -5063 460 118 0 0 chr18 25379811 25379879 -60609055 - MSTD LTR MaLR 0 396 329 1902 159 0 3 chr18 25379904 25380199 -60608735 + AluSx SINE Alu 1 294 -18 420 286 121 0 chr18 25380207 25380347 -60608587 + MIR3 SINE MIR 29 185 -23 332 291 22 44 chr18 25381634 25381707 -60607227 + L1ME4a LINE L1 5792 5865 -256 4985 83 22 8 chr18 25381707 25382346 -60606588 + L1PA11 LINE L1 5527 6174 0 332 291 22 44 chr18 25382346 25382454 -60606480 + L1ME4a LINE L1 5865 5969 -152 5681 171 39 101 chr18 25382560 25383730 -60605204 - Charlie1a DNA MER1_type -1306 1455 401 2209 23 50 0 chr18 25383730 25383990 -60604944 + AluY SINE Alu 35 307 -4 5681 171 39 101 chr18 25383990 25384352 -60604582 - Charlie1a DNA MER1_type -2360 401 18 283 270 88 7 chr18 25384397 25384534 -60604400 + L1ME4a LINE L1 5970 6117 -4 613 158 16 47 chr18 25384914 25385041 -60603893 + Charlie5 DNA MER1_type 1 123 -2489 1464 178 95 3 chr18 25385041 25385400 -60603534 + Charlie5 DNA MER1_type 2233 2624 0 2226 117 3 3 chr18 25387112 25387420 -60601514 + AluSx SINE Alu 1 308 -4 237 108 0 0 chr18 25388285 25388322 -60600612 + (CA)n Simple_repeat Simple_repeat 2 38 0 2979 149 4 12 chr18 25389621 25389641 -60599293 - L1 LINE L1 -757 5389 5370 893 152 12 0 chr18 25389641 25389805 -60599129 - L1MA8 LINE L1 -8 6283 6118 2979 149 4 12 chr18 25389805 25390295 -60598639 - L1 LINE L1 -776 5370 4883 2372 172 111 12 chr18 25390349 25391725 -60597209 - SATR1 Satellite Satellite -1 1512 1 21 0 0 0 chr18 25391751 25391772 -60597162 + AT_rich Low_complexity Low_complexity 1 21 0 285 257 5 43 chr18 25391807 25391994 -60596940 + (TTA)n Simple_repeat Simple_repeat 1 180 0 2512 185 102 12 chr18 25391998 25396291 -60592643 - SATR1 Satellite Satellite -1 4681 1 1931 169 9 11 chr18 25396351 25396701 -60592233 - L1 LINE L1 -1264 4882 4534 222 189 14 54 chr18 25396884 25396958 -60591976 + MIR SINE MIR 191 261 -1 1458 167 117 11 chr18 25397653 25397935 -60590999 - AluJo SINE Alu 0 312 1 479 345 90 31 chr18 25398155 25398410 -60590524 - MER115 DNA AcHobo -260 433 164 262 175 0 0 chr18 25398821 25398861 -60590073 - MER113 DNA MER1_type? -28 493 454 217 216 0 0 chr18 25398989 25399026 -60589908 + (CA)n Simple_repeat Simple_repeat 2 38 0 256 200 25 25 chr18 25399029 25399109 -60589825 - MER113 DNA MER1_type? -441 80 1 1218 215 100 33 chr18 25399501 25399831 -60589103 - MLT1B LTR MaLR -38 352 1 363 301 51 13 chr18 25399907 25400063 -60588871 + MER5A DNA MER1_type 28 189 0 487 331 86 35 chr18 25400543 25400833 -60588101 - L2 LINE L2 0 3272 2968 530 289 88 10 chr18 25401177 25401381 -60587553 + MIR SINE MIR 11 230 -32 504 327 44 22 chr18 25401387 25401705 -60587229 - L2 LINE L2 -1319 1995 1671 790 224 6 19 chr18 25401770 25401930 -60587004 + Charlie1a DNA MER1_type 1 158 -1297 2108 185 31 15 chr18 25401930 25402320 -60586614 - MSTD LTR MaLR 0 396 1 * 5006 194 56 23 chr18 25402320 25403390 -60585544 + Charlie1a DNA MER1_type 151 1265 -1496 1460 174 13 60 chr18 25403390 25403706 -60585228 + AluJo SINE Alu 11 311 -1 5006 194 56 23 chr18 25403706 25403819 -60585115 + Charlie1a DNA MER1_type 1265 1373 -82 406 321 46 36 chr18 25403823 25404103 -60584831 - L2 LINE L2 -1704 1610 1328 21 36 0 0 chr18 25404276 25404304 -60584630 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr18 25405588 25405609 -60583325 + AT_rich Low_complexity Low_complexity 1 21 0 722 206 90 16 chr18 25406204 25406393 -60582541 + MLT1B LTR MaLR 188 390 0 450 311 49 64 chr18 25406518 25406586 -60582348 - L2 LINE L2 -564 2750 2683 1784 124 0 44 chr18 25406586 25406860 -60582074 + AluSx SINE Alu 31 292 -20 180 0 0 0 chr18 25406865 25406885 -60582049 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 450 311 49 64 chr18 25406885 25407154 -60581780 - L2 LINE L2 -635 2679 2412 744 286 24 5 chr18 25407414 25407620 -60581314 + MIR SINE MIR 2 211 -51 344 182 100 27 chr18 25407866 25407976 -60580958 + LTR67 LTR ERVL 435 552 -5 1510 197 23 10 chr18 25408507 25408811 -60580123 - AluJo SINE Alu -4 308 1 2413 161 60 5 chr18 25409144 25409547 -60579387 - MSTB1 LTR MaLR -3 429 5 227 204 19 0 chr18 25409725 25409779 -60579155 + (CAT)n Simple_repeat Simple_repeat 2 56 0 22 35 0 0 chr18 25410671 25410700 -60578234 + AT_rich Low_complexity Low_complexity 1 29 0 822 231 29 0 chr18 25413693 25413866 -60575068 + MER45A DNA AcHobo 1 178 0 21 36 0 0 chr18 25417363 25417391 -60571543 + AT_rich Low_complexity Low_complexity 1 28 0 30 27 0 0 chr18 25418574 25418611 -60570323 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr18 25420125 25420149 -60568785 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr18 25420183 25420208 -60568726 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr18 25420352 25420373 -60568561 + AT_rich Low_complexity Low_complexity 1 21 0 2241 113 0 3 chr18 25420723 25421024 -60567910 - AluSx SINE Alu -12 300 1 2107 121 10 16 chr18 25421960 25422273 -60566661 - AluJb SINE Alu -1 311 1 593 314 48 5 chr18 25422285 25422492 -60566442 + MIR SINE MIR 32 247 -15 2375 67 3 0 chr18 25422636 25422949 -60565985 + AluY SINE Alu 1 314 0 617 269 39 16 chr18 25423111 25423293 -60565641 - MIR SINE MIR -17 245 60 221 303 15 0 chr18 25426177 25426243 -60562691 + L2 LINE L2 3205 3271 -1 183 267 127 100 chr18 25428788 25428938 -60559996 + L2 LINE L2 3118 3271 -1 551 87 39 0 chr18 25429502 25429606 -60559328 + (TGGA)n Simple_repeat Simple_repeat 3 110 0 323 304 23 58 chr18 25429806 25429977 -60558957 - MIR SINE MIR -56 206 42 385 250 45 0 chr18 25430424 25430512 -60558422 - MIR SINE MIR -54 208 117 1915 136 30 7 chr18 25430514 25430809 -60558125 + AluSx SINE Alu 1 302 -10 515 42 0 14 chr18 25430835 25430906 -60558028 + (GGAA)n Simple_repeat Simple_repeat 2 71 0 447 317 17 0 chr18 25430906 25431026 -60557908 - MIR SINE MIR -128 134 13 7540 32 0 4 chr18 25431374 25432392 -60556542 - L1PA5 LINE L1 -2 6152 5137 43 35 0 0 chr18 25432536 25432593 -60556341 + AT_rich Low_complexity Low_complexity 1 57 0 396 0 0 0 chr18 25432716 25432760 -60556174 + (TG)n Simple_repeat Simple_repeat 2 45 0 236 167 0 50 chr18 25434408 25434468 -60554466 + L1ME4a LINE L1 6065 6121 0 363 281 179 15 chr18 25434612 25434808 -60554126 - MER102b DNA MER1_type 0 341 114 222 303 72 112 chr18 25434865 25434930 -60554004 + L2 LINE L2 2560 2626 -688 775 243 63 19 chr18 25434930 25435136 -60553798 + MER20 DNA MER1_type 1 215 -4 2593 99 11 8 chr18 25435136 25435510 -60553424 - THE1C LTR MaLR 0 375 1 222 303 72 112 chr18 25435510 25435595 -60553339 + L2 LINE L2 2624 2705 -609 253 316 34 34 chr18 25435687 25435804 -60553130 + MLT1L LTR MaLR 95 211 -404 1410 244 39 66 chr18 25435857 25436418 -60552516 + MLT1H LTR MaLR 4 549 0 308 247 28 104 chr18 25436510 25436596 -60552338 + MLT1L LTR MaLR 421 512 -103 284 0 28 0 chr18 25436596 25436632 -60552302 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 2043 129 0 0 chr18 25436632 25436912 -60552022 - AluSx SINE Alu -32 280 1 1583 184 3 41 chr18 25436918 25437211 -60551723 - AluJo SINE Alu -20 292 11 308 247 28 104 chr18 25437211 25437298 -60551636 + MLT1L LTR MaLR 516 588 -27 222 37 0 0 chr18 25437498 25437525 -60551409 + (TC)n Simple_repeat Simple_repeat 2 28 0 2070 65 0 0 chr18 25437610 25437872 -60551062 + L1PA7 LINE L1 5893 6154 0 1035 249 199 35 chr18 25437939 25438537 -60550397 - HAL1 LINE L1 -84 2423 1728 180 0 0 0 chr18 25438641 25438661 -60550273 + (TC)n Simple_repeat Simple_repeat 2 21 0 573 223 74 10 chr18 25438661 25438863 -60550071 - HAL1 LINE L1 -1087 1420 1206 1621 276 101 38 chr18 25438864 25439599 -60549335 - HAL1 LINE L1 -1629 878 84 2750 13 0 13 chr18 25439599 25439912 -60549022 - AluYa5 SINE Alu -2 309 1 1621 276 101 38 chr18 25439912 25440002 -60548932 - HAL1 LINE L1 -2423 84 1 222 271 104 35 chr18 25441255 25441399 -60547535 + L2 LINE L2 3160 3313 0 2501 58 0 0 chr18 25441746 25442041 -60546893 + AluY SINE Alu 1 295 -16 812 278 87 0 chr18 25442742 25442983 -60545951 - MIR SINE MIR 0 262 1 333 287 9 19 chr18 25443205 25443313 -60545621 - MIR SINE MIR -5 257 151 2520 71 0 3 chr18 25443346 25443655 -60545279 - AluSq SINE Alu -5 308 1 248 231 58 0 chr18 25443664 25443716 -60545218 - L2 LINE L2 -31 3241 3187 1558 142 81 9 chr18 25443724 25444047 -60544887 - Ricksha DNA DNA -8 3246 2901 6676 131 17 40 chr18 25444111 25445346 -60543588 - Ricksha DNA DNA -351 2895 1690 691 155 113 5 chr18 25445345 25445510 -60543424 - Ricksha DNA DNA -1761 285 1 * 2283 99 0 13 chr18 25445658 25445971 -60542963 + AluY SINE Alu 1 309 -2 311 258 108 25 chr18 25446106 25446226 -60542708 - MIR SINE MIR -126 136 7 283 288 169 0 chr18 25446833 25446951 -60541983 + L2 LINE L2 3133 3270 -2 1825 146 3 31 chr18 25447347 25447641 -60541293 + AluJo SINE Alu 1 286 -26 21 0 0 0 chr18 25449480 25449501 -60539433 + AT_rich Low_complexity Low_complexity 1 21 0 2026 132 0 13 chr18 25449907 25450211 -60538723 + AluSx SINE Alu 1 300 -12 307 317 78 0 chr18 25451472 25451639 -60537295 + Charlie8 DNA MER1_type 46 225 -2192 264 244 61 0 chr18 25452123 25452205 -60536729 + GA-rich Low_complexity Low_complexity 1 87 0 377 283 176 35 chr18 25454288 25454487 -60534447 + MIR SINE MIR 19 243 -19 2052 118 0 7 chr18 25456774 25457102 -60531832 - AluSx SINE Alu 0 332 7 228 214 0 0 chr18 25458653 25458709 -60530225 + GA-rich Low_complexity Low_complexity 2 57 0 1030 164 33 6 chr18 25458762 25458945 -60529989 - AluJo SINE Alu -3 309 122 303 279 37 22 chr18 25459340 25459476 -60529458 + L1MC/D LINE L1 5674 5811 -1997 2338 196 20 58 chr18 25460274 25460435 -60528499 + L1MA8 LINE L1 466 632 -6857 2237 109 0 20 chr18 25460435 25460764 -60528170 + AluSq SINE Alu 1 313 0 2338 196 20 58 chr18 25460764 25461188 -60527746 + L1MA8 LINE L1 631 1029 -6460 2474 236 56 44 chr18 25461197 25462565 -60526369 + L1MA8 LINE L1 2008 3371 -4194 5468 167 46 37 chr18 25462595 25463109 -60525825 + L1MA8 LINE L1 4042 4550 -3015 1645 148 8 0 chr18 25463109 25463345 -60525589 + AluSx SINE Alu 44 281 -31 7633 22 2 0 chr18 25463346 25464579 -60524355 + L1PA4 LINE L1 4917 6151 -4 5468 167 46 37 chr18 25464579 25465406 -60523528 + L1MA8 LINE L1 4549 5397 -2168 5420 123 24 5 chr18 25465409 25466340 -60522594 + L1MA8 LINE L1 6759 7706 -4 2113 109 3 11 chr18 25468439 25468762 -60520172 + AluSg SINE Alu 1 321 0 284 335 100 25 chr18 25468766 25469127 -60519807 + L2 LINE L2 1699 2086 -1228 271 248 22 88 chr18 25469152 25469289 -60519645 - L2 LINE L2 -50 3263 3136 234 350 86 0 chr18 25469289 25469406 -60519528 - MIR3 SINE MIR -48 160 34 194 250 0 0 chr18 25470132 25470176 -60518758 - L2 LINE L2 -8 3305 3262 * 246 231 0 0 chr18 25470167 25470219 -60518715 + L2 LINE L2 3262 3313 0 1417 150 57 63 chr18 25470370 25470670 -60518264 - AluJb SINE Alu -14 298 1 191 222 0 0 chr18 25473142 25473178 -60515756 - L2 LINE L2 -15 3257 3222 352 266 81 35 chr18 25473822 25473995 -60514939 - MLT1K LTR MaLR -377 211 31 888 258 41 0 chr18 25474329 25474550 -60514384 - MIR SINE MIR -2 260 31 544 135 7 7 chr18 25476528 25476637 -60512297 + L1MA9 LINE L1 6182 6290 -1 201 344 0 16 chr18 25477804 25477868 -60511066 + MER5B DNA MER1_type 104 166 -12 183 80 0 0 chr18 25477879 25477904 -60511030 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 18387 147 18 28 chr18 25477957 25479210 -60509724 - L1MA2 LINE L1 -18 7705 6441 194 0 39 0 chr18 25479210 25479236 -60509698 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 18387 147 18 28 chr18 25479236 25482727 -60506207 - L1MA2 LINE L1 -1282 6441 2918 2047 111 4 4 chr18 25482727 25483046 -60505888 - AluSc SINE Alu 0 319 1 18387 147 18 28 chr18 25483046 25483577 -60505357 - L1MA2 LINE L1 -4805 2918 2383 2363 80 7 0 chr18 25483577 25483877 -60505057 - AluY SINE Alu -9 302 1 18387 147 18 28 chr18 25483877 25485900 -60503034 - L1MA2 LINE L1 -5340 2383 479 922 198 31 13 chr18 25486061 25486288 -60502646 + L1MA9 LINE L1 5931 6161 -151 262 200 18 0 chr18 25486288 25486343 -60502591 + GA-rich Low_complexity Low_complexity 3 58 0 459 114 9 97 chr18 25486343 25486457 -60502477 + L1MA9 LINE L1 6161 6264 -48 221 277 17 17 chr18 25486460 25486579 -60502355 + A-rich Low_complexity Low_complexity 5 123 0 276 268 164 27 chr18 25486695 25487061 -60501873 + L1ME4a LINE L1 5696 6111 -10 24 100 0 0 chr18 25487069 25487149 -60501785 + AT_rich Low_complexity Low_complexity 1 80 0 284 261 63 45 chr18 25487731 25487842 -60501092 - L2 LINE L2 0 3272 3160 1911 203 173 12 chr18 25488126 25488613 -60500321 + MLT1F1 LTR MaLR 1 565 -2 277 252 260 16 chr18 25488656 25488779 -60500155 + MLT1J2 LTR MaLR 298 450 0 26 30 0 0 chr18 25488845 25488878 -60500056 + AT_rich Low_complexity Low_complexity 1 33 0 1934 142 44 0 chr18 25489019 25489315 -60499619 - AluJo SINE Alu -1 311 3 242 158 0 0 chr18 25489904 25489942 -60498992 - tRNA-Ile-ATT tRNA tRNA -33 44 7 186 71 0 0 chr18 25492418 25492446 -60496488 + (GA)n Simple_repeat Simple_repeat 2 29 0 576 283 133 15 chr18 25492734 25493133 -60495801 + L1ME4a LINE L1 5440 5885 -277 40 59 0 0 chr18 25493434 25493502 -60495432 + AT_rich Low_complexity Low_complexity 1 68 0 261 345 46 46 chr18 25494339 25494513 -60494421 - L2 LINE L2 -91 3181 3008 207 69 0 0 chr18 25495963 25495992 -60492942 + (T)n Simple_repeat Simple_repeat 1 29 0 535 306 57 35 chr18 25496472 25496701 -60492233 + L3 LINE CR1 1311 1544 -33 198 305 201 52 chr18 25497579 25497887 -60491047 + L2 LINE L2 1963 2316 -998 944 182 11 6 chr18 25498506 25498682 -60490252 + MER5B DNA MER1_type 2 178 0 1845 169 0 19 chr18 25499916 25500230 -60488704 - AluJo SINE Alu -4 308 1 270 354 0 9 chr18 25501818 25501931 -60487003 + MER5B DNA MER1_type 5 116 -62 330 45 0 0 chr18 25502081 25502125 -60486809 + (TG)n Simple_repeat Simple_repeat 2 45 0 467 272 83 30 chr18 25503397 25503566 -60485368 + MIR SINE MIR 25 202 -60 386 295 0 0 chr18 25503629 25503724 -60485210 + MIR SINE MIR 53 147 -115 1998 157 0 3 chr18 25503834 25504146 -60484788 - AluSx SINE Alu -1 311 1 5029 94 19 6 chr18 25505013 25505793 -60483141 + L1PB2 LINE L1 5355 6144 -7 189 317 33 0 chr18 25506153 25506213 -60482721 + L2 LINE L2 3189 3250 -22 328 297 26 39 chr18 25506696 25506851 -60482083 + L1ME4a LINE L1 5969 6121 0 254 319 12 40 chr18 25507410 25507543 -60481391 + MIR SINE MIR 37 160 -48 1887 147 43 25 chr18 25507845 25508213 -60480721 + THE1C LTR MaLR 1 375 0 631 176 48 0 chr18 25509207 25509332 -60479602 + MLT2B3 LTR ERVL 1 131 -423 725 158 99 136 chr18 25509333 25509605 -60479329 + MLT2B3 LTR ERVL 293 554 0 2693 123 45 2 chr18 25509625 25510096 -60478838 + L1MB3 LINE L1 5686 6176 -7 740 320 23 4 chr18 25510748 25511004 -60477930 - MIR SINE MIR 0 262 2 209 293 158 30 chr18 25512352 25512485 -60476449 - MIR SINE MIR -6 256 107 32 43 0 0 chr18 25512655 25512701 -60476233 + AT_rich Low_complexity Low_complexity 1 46 0 1315 236 113 62 chr18 25512897 25513384 -60475550 + MLT1G1 LTR MaLR 15 595 0 527 277 29 39 chr18 25513384 25513590 -60475344 + L2 LINE L2 3110 3313 0 181 333 14 0 chr18 25513890 25513959 -60474975 - L3 LINE CR1 -337 1240 1171 22 35 0 0 chr18 25514108 25514137 -60474797 + AT_rich Low_complexity Low_complexity 1 29 0 1926 42 0 54 chr18 25514181 25514441 -60474493 - L1PA5 LINE L1 0 6154 5909 292 182 0 18 chr18 25514468 25514523 -60474411 + MIR SINE MIR 188 241 -21 879 333 67 29 chr18 25514602 25515080 -60473854 + L2 LINE L2 2818 3313 0 517 309 131 23 chr18 25515089 25515348 -60473586 - L3 LINE CR1 -437 1140 854 760 325 100 18 chr18 25515715 25516096 -60472838 - L3 LINE CR1 -734 843 432 186 191 24 0 chr18 25517265 25517307 -60471627 - L2 LINE L2 0 3313 3271 186 103 0 0 chr18 25517310 25517339 -60471595 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2119 107 0 13 chr18 25517393 25517693 -60471241 + AluSc SINE Alu 1 296 -13 1926 154 0 0 chr18 25517738 25518024 -60470910 + AluJo SINE Alu 1 286 -26 1823 235 108 19 chr18 25518124 25518661 -60470273 - MLT1E LTR MaLR 0 593 9 2264 104 3 0 chr18 25519251 25519550 -60469384 + AluSc SINE Alu 8 307 -2 1963 132 13 10 chr18 25519611 25519921 -60469013 + AluSx SINE Alu 1 311 -1 215 325 48 36 chr18 25520683 25520766 -60468168 + MER5B DNA MER1_type 94 177 -1 397 241 37 19 chr18 25520946 25521054 -60467880 + MER5B DNA MER1_type 5 114 -64 2470 134 10 3 chr18 25524900 25525287 -60463647 - MLT1B LTR MaLR 0 390 1 204 178 22 22 chr18 25525623 25525668 -60463266 + L2 LINE L2 3212 3256 -16 213 362 196 0 chr18 25525822 25525960 -60462974 - L2 LINE L2 -5 3267 3103 1271 194 46 75 chr18 25525979 25526107 -60462827 + MLT2D LTR ERVL 1 131 -423 2229 112 0 0 chr18 25526107 25526402 -60462532 + AluSx SINE Alu 1 295 -17 1271 194 46 75 chr18 25526402 25526676 -60462258 + MLT2D LTR ERVL 131 534 -20 395 152 13 0 chr18 25526712 25526791 -60462143 + (TA)n Simple_repeat Simple_repeat 2 81 0 246 170 0 19 chr18 25526797 25526850 -60462084 + MLT2A2 LTR ERVL 402 453 0 187 309 36 0 chr18 25526872 25526927 -60462007 - L2 LINE L2 -216 3056 3000 419 220 174 9 chr18 25527392 25527501 -60461433 + FLAM_A SINE Alu 1 127 -6 378 0 0 0 chr18 25527501 25527543 -60461391 + (CA)n Simple_repeat Simple_repeat 2 43 0 1476 179 47 10 chr18 25527831 25528132 -60460802 + AluSx SINE Alu 1 312 0 719 275 123 51 chr18 25528280 25529004 -60459930 + L1MEd LINE L1 893 1668 -4862 486 251 143 5 chr18 25529033 25529236 -60459698 + HAL1 LINE L1 1395 1625 -882 248 154 66 22 chr18 25529240 25529331 -60459603 + (TATAA)n Simple_repeat Simple_repeat 4 98 0 1751 166 3 7 chr18 25529441 25529730 -60459204 + AluJo SINE Alu 1 288 -24 2276 113 3 0 chr18 25529950 25530250 -60458684 + AluSp SINE Alu 1 301 -12 232 256 80 22 chr18 25530336 25530473 -60458461 + L1MEd LINE L1 2455 2599 -3941 612 230 64 107 chr18 25530478 25530717 -60458217 + L1MC5 LINE L1 7348 7596 -365 2156 124 0 13 chr18 25530717 25531024 -60457910 + AluSx SINE Alu 1 303 -9 612 230 64 107 chr18 25531024 25531362 -60457572 + L1MC5 LINE L1 7596 7900 -61 283 86 0 0 chr18 25531415 25531450 -60457484 + U2 snRNA snRNA 1 35 -153 298 255 66 100 chr18 25531450 25531564 -60457370 + L1MEd LINE L1 2631 2747 -3793 1248 54 0 0 chr18 25531564 25531712 -60457222 - L1PA13 LINE L1 -8 6155 6008 298 255 66 100 chr18 25531712 25531868 -60457066 + L1MEd LINE L1 2747 2892 -3648 1271 198 170 34 chr18 25531997 25532380 -60456554 + MLT1D LTR MaLR 71 505 0 27 49 0 0 chr18 25532927 25532968 -60455966 + GC_rich Low_complexity Low_complexity 1 41 0 274 244 207 0 chr18 25535317 25535399 -60453535 - L2 LINE L2 -24 3289 3191 2058 169 47 49 chr18 25535712 25536180 -60452754 + MLT1C LTR MaLR 1 467 0 554 157 186 29 chr18 25536298 25536438 -60452496 + MER5A DNA MER1_type 1 162 -27 1741 123 0 8 chr18 25536862 25537097 -60451837 + AluSg SINE Alu 1 233 -77 31 0 0 0 chr18 25537174 25537205 -60451729 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr18 25537240 25537268 -60451666 + AT_rich Low_complexity Low_complexity 1 28 0 581 14 27 0 chr18 25537568 25537641 -60451293 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 331 307 0 51 chr18 25538274 25538411 -60450523 - MLT1L LTR MaLR -56 559 430 290 237 175 0 chr18 25538600 25538697 -60450237 - L2 LINE L2 0 3313 3200 286 288 80 15 chr18 25538745 25538894 -60450040 + LTR33A LTR ERVL 292 699 -92 670 197 14 7 chr18 25539429 25539571 -60449363 + L2 LINE L2 1822 1964 -1350 1150 210 6 0 chr18 25539703 25539921 -60449013 - MIR SINE MIR 0 262 43 221 260 137 0 chr18 25540458 25540531 -60448403 + L2 LINE L2 3154 3236 -36 2510 112 15 3 chr18 25541488 25541819 -60447115 - MER1B DNA MER1_type 0 337 3 839 214 10 25 chr18 25542034 25542235 -60446699 + L1MC5 LINE L1 7603 7800 -161 228 135 0 0 chr18 25542309 25542346 -60446588 + (TG)n Simple_repeat Simple_repeat 2 38 0 2750 110 6 3 chr18 25542682 25543045 -60445889 - THE1B LTR MaLR 0 364 1 734 171 0 7 chr18 25543271 25543503 -60445431 + AluJb SINE Alu 2 295 -17 433 310 28 21 chr18 25543569 25543711 -60445223 - MIR SINE MIR -112 150 8 282 340 0 0 chr18 25543761 25543858 -60445076 + L2 LINE L2 1206 1302 -2012 649 260 121 25 chr18 25543859 25544174 -60444760 + L2 LINE L2 1687 2031 -1283 255 258 192 41 chr18 25544186 25544457 -60444477 - L2 LINE L2 -381 2933 2622 3715 45 2 16 chr18 25544481 25544928 -60444006 - L1PA4 LINE L1 -3 6152 5712 819 155 0 0 chr18 25546423 25546552 -60442382 + AluJb SINE Alu 1 129 -183 419 333 36 41 chr18 25547332 25547527 -60441407 + MIR SINE MIR 37 230 -32 1265 180 3 98 chr18 25547762 25547935 -60440999 + MER33 DNA MER1_type 27 156 -2429 1604 186 25 4 chr18 25547935 25548210 -60440724 - AluJo SINE Alu -30 282 2 1265 180 3 98 chr18 25548210 25548364 -60440570 + MER33 DNA MER1_type 156 323 -1 2262 121 0 0 chr18 25548415 25548722 -60440212 + AluSx SINE Alu 1 307 -5 257 265 12 24 chr18 25548935 25549018 -60439916 - MER3 DNA MER1_type -100 109 28 1718 178 0 0 chr18 25549155 25549441 -60439493 + AluJb SINE Alu 1 286 -26 2612 47 0 0 chr18 25549761 25550062 -60438872 - AluY SINE Alu -10 301 1 191 330 111 27 chr18 25550600 25550709 -60438225 + MIR SINE MIR 36 152 -61 1091 242 95 142 chr18 25551996 25552950 -60435984 + L1ME1 LINE L1 22 931 -5465 1412 147 37 138 chr18 25553034 25553361 -60435573 + AluJo SINE Alu 1 294 -8 189 0 0 0 chr18 25553369 25553390 -60435544 + (GGAAA)n Simple_repeat Simple_repeat 2 22 0 2154 192 44 10 chr18 25553418 25553898 -60435036 + L1ME1 LINE L1 2324 2819 -3396 2876 231 50 34 chr18 25553930 25554854 -60434080 + L1ME1 LINE L1 3213 4151 -2064 2587 240 29 49 chr18 25554870 25554961 -60433973 + L1ME1 LINE L1 5277 5368 -867 1927 128 28 14 chr18 25554961 25555251 -60433683 + AluJo SINE Alu 14 307 -5 2587 240 29 49 chr18 25555251 25556018 -60432916 + L1ME1 LINE L1 5368 6118 -117 482 232 72 14 chr18 25555996 25556134 -60432800 - L1M4 LINE L1 -453 5731 5586 * 319 133 167 0 chr18 25556138 25556198 -60432736 + L1ME1 LINE L1 6118 6187 -48 203 243 0 27 chr18 25556713 25556787 -60432147 + (TATATG)n Simple_repeat Simple_repeat 6 77 0 293 103 39 26 chr18 25557122 25557200 -60431734 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 305 129 4 0 chr18 25559046 25559101 -60429833 - MIR SINE MIR -77 131 74 198 175 50 0 chr18 25560401 25560441 -60428493 - MIR SINE MIR -8 254 213 231 278 100 0 chr18 25560476 25560566 -60428368 - L2 LINE L2 0 3272 3174 198 250 18 18 chr18 25560679 25560735 -60428199 - MIR SINE MIR -120 142 87 2787 164 68 30 chr18 25560916 25560954 -60427980 + L1MB7 LINE L1 5569 5604 -580 2336 92 3 0 chr18 25560954 25561248 -60427686 + AluSx SINE Alu 1 295 -17 2787 164 68 30 chr18 25561248 25561784 -60427150 + L1MB7 LINE L1 5604 6165 -19 1093 166 36 49 chr18 25561910 25562103 -60426831 + L1PB4 LINE L1 5937 6128 -28 2315 106 13 0 chr18 25562103 25562406 -60426528 - AluSx SINE Alu -5 307 1 1093 166 36 49 chr18 25562406 25562435 -60426499 + L1PB4 LINE L1 6128 6156 0 1550 161 0 88 chr18 25562479 25562808 -60426126 + AluJo SINE Alu 8 307 -5 758 125 0 0 chr18 25563171 25563275 -60425659 + FRAM SINE Alu 62 165 -11 321 307 85 16 chr18 25563468 25563657 -60425277 - MIR3 SINE MIR -3 205 4 469 241 128 36 chr18 25563983 25564178 -60424756 - MLT1K LTR MaLR -8 580 368 2267 84 44 0 chr18 25564265 25564562 -60424372 + AluSx SINE Alu 1 310 -2 2244 106 3 3 chr18 25564568 25564870 -60424064 + AluSg SINE Alu 1 302 -8 681 124 191 0 chr18 25565506 25565611 -60423323 - FLAM_C SINE Alu -18 125 1 350 323 111 41 chr18 25565974 25566315 -60422619 + MLT1K LTR MaLR 221 585 -3 833 117 0 84 chr18 25567124 25567278 -60421656 - FLAM_C SINE Alu 0 143 3 802 208 13 0 chr18 25567279 25567438 -60421496 - FRAM SINE Alu -4 172 12 285 268 24 37 chr18 25570499 25570581 -60418353 - MIR3 SINE MIR -17 191 111 1764 218 59 2 chr18 25571175 25571601 -60417333 + L1ME2 LINE L1 5452 5901 -263 674 197 53 96 chr18 25571604 25571812 -60417122 + L1ME2 LINE L1 5956 6154 -10 309 114 29 14 chr18 25571931 25572001 -60416933 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 1665 164 44 17 chr18 25572114 25572407 -60416527 + AluJb SINE Alu 1 301 -11 332 22 22 0 chr18 25572485 25572530 -60416404 + (CA)n Simple_repeat Simple_repeat 1 46 0 288 279 183 0 chr18 25572676 25572780 -60416154 + MIR SINE MIR 43 165 -97 180 0 0 0 chr18 25573368 25573388 -60415546 + (A)n Simple_repeat Simple_repeat 1 20 0 252 275 0 50 chr18 25574003 25574083 -60414851 + L2 LINE L2 3188 3263 -9 824 271 114 8 chr18 25574111 25574347 -60414587 + MIR SINE MIR 2 262 0 1598 205 0 31 chr18 25574432 25574754 -60414180 + AluJo SINE Alu 1 312 0 2209 119 0 3 chr18 25575173 25575475 -60413459 + AluSx SINE Alu 1 301 -11 452 175 146 0 chr18 25577152 25577255 -60411679 - Charlie1 DNA MER1_type -5 2756 2639 2002 130 7 7 chr18 25577255 25577547 -60411387 + AluSx SINE Alu 13 304 -8 516 72 0 0 chr18 25577556 25577625 -60411309 + (GGAA)n Simple_repeat Simple_repeat 4 72 0 1297 188 12 50 chr18 25577639 25577958 -60410976 - Charlie1 DNA MER1_type -112 2649 2343 342 0 0 0 chr18 25578689 25578727 -60410207 + (TG)n Simple_repeat Simple_repeat 2 39 0 234 260 48 10 chr18 25578950 25579054 -60409880 + L1MC4 LINE L1 7837 7944 -98 243 79 0 0 chr18 25579739 25579777 -60409157 + (TC)n Simple_repeat Simple_repeat 2 39 0 335 362 142 37 chr18 25580187 25580455 -60408479 - L2 LINE L2 -6 3266 2971 1794 117 7 75 chr18 25580696 25581003 -60407931 - AluJo SINE Alu -26 286 1 837 171 157 0 chr18 25581451 25581615 -60407319 - FRAM SINE Alu 0 182 1 195 42 0 0 chr18 25581634 25581658 -60407276 + (CA)n Simple_repeat Simple_repeat 2 25 0 291 280 320 6 chr18 25581875 25582050 -60406884 - MIR SINE MIR -19 243 14 296 56 0 0 chr18 25582152 25582188 -60406746 - U2 snRNA snRNA -152 36 1 1505 190 65 73 chr18 25582561 25582946 -60405988 + MER66A LTR ERV1 97 478 0 496 151 70 0 chr18 25584051 25584137 -60404797 + MLT1H LTR MaLR 5 96 -453 1878 161 13 0 chr18 25584237 25584634 -60404300 - AluJb SINE Alu 0 409 9 897 262 150 14 chr18 25584645 25584931 -60404003 + MLT1H LTR MaLR 225 549 0 244 104 0 83 chr18 25585630 25585678 -60403256 + L1MB1 LINE L1 4699 4742 -1404 839 156 0 21 chr18 25585683 25585824 -60403110 + FLAM_C SINE Alu 1 138 -5 4149 155 40 43 chr18 25585824 25586518 -60402416 + L1MB1 LINE L1 4739 5433 -756 207 114 0 0 chr18 25586518 25586553 -60402381 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4149 155 40 43 chr18 25586553 25586603 -60402331 + L1MB1 LINE L1 5433 5482 -707 237 65 0 0 chr18 25586603 25586634 -60402300 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4149 155 40 43 chr18 25586634 25586758 -60402176 + L1MB1 LINE L1 5482 5605 -584 2105 120 0 0 chr18 25586758 25587089 -60401845 + AluSx SINE Alu 1 331 0 4149 155 40 43 chr18 25587089 25587515 -60401419 + L1MB1 LINE L1 5605 6036 -153 1352 249 92 63 chr18 25587801 25588290 -60400644 - MLT1J LTR MaLR -4 507 5 2369 108 61 19 chr18 25588473 25588833 -60400101 - THE1C LTR MaLR 0 375 1 206 121 0 0 chr18 25588847 25588880 -60400054 + (A)n Simple_repeat Simple_repeat 1 33 0 504 282 64 45 chr18 25588881 25589147 -60399787 - MLT1K LTR MaLR -38 550 280 339 247 10 31 chr18 25589236 25589333 -60399601 - MLT1K LTR MaLR -476 112 18 187 269 0 0 chr18 25589435 25589487 -60399447 + MIR SINE MIR 140 191 -71 2170 106 14 3 chr18 25589798 25590090 -60398844 + AluSx SINE Alu 1 295 -17 277 329 108 25 chr18 25590488 25590728 -60398206 - MIR SINE MIR -1 261 2 812 250 24 9 chr18 25590747 25590959 -60397975 + U3 snRNA snRNA 1 215 -2 24 0 0 0 chr18 25590965 25590989 -60397945 + AT_rich Low_complexity Low_complexity 1 24 0 1170 202 108 56 chr18 25590989 25591114 -60397820 + AluJo SINE Alu 1 118 -184 2240 93 3 31 chr18 25591114 25591435 -60397499 - AluSx SINE Alu 0 312 1 1170 202 108 56 chr18 25591435 25591596 -60397338 + AluJo SINE Alu 118 302 0 262 0 26 26 chr18 25592536 25592575 -60396359 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2125 108 3 33 chr18 25595794 25596101 -60392833 + AluSp SINE Alu 15 312 -1 261 0 0 0 chr18 25597251 25597280 -60391654 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 588 250 127 33 chr18 25597290 25597566 -60391368 - L2 LINE L2 -21 3292 2991 369 234 178 0 chr18 25599858 25599965 -60388969 + HsTC2 DNA Tc2 19 144 -1754 1549 221 43 41 chr18 25599976 25600249 -60388685 + HsTC2 DNA Tc2 1307 1578 -320 1833 128 7 18 chr18 25600249 25600530 -60388404 - AluJb SINE Alu -34 278 1 1549 221 43 41 chr18 25600530 25600673 -60388261 + HsTC2 DNA Tc2 1578 1900 2 232 319 0 0 chr18 25600679 25600748 -60388186 + MIR SINE MIR 84 152 -110 360 264 163 50 chr18 25602263 25602473 -60386461 + L2 LINE L2 1849 2096 -1218 1852 147 3 17 chr18 25602473 25602911 -60386023 - AluJo SINE Alu 0 434 1 360 264 163 50 chr18 25602911 25602956 -60385978 + L2 LINE L2 2096 2135 -1179 954 146 0 64 chr18 25602999 25603201 -60385733 + L1PA7 LINE L1 5977 6167 0 285 314 58 26 chr18 25603241 25603397 -60385537 + L2 LINE L2 2521 2681 -633 1794 211 71 24 chr18 25603411 25603832 -60385102 + MLT1D LTR MaLR 1 441 -64 1389 165 0 52 chr18 25603840 25604088 -60384846 + AluJo SINE Alu 58 292 -20 1909 131 71 0 chr18 25604116 25604398 -60384536 + AluSx SINE Alu 1 302 -10 283 296 23 30 chr18 25604400 25604532 -60384402 + MIR SINE MIR 130 260 -2 1055 224 51 4 chr18 25604566 25604803 -60384131 - MIR SINE MIR -10 252 5 445 180 25 74 chr18 25604817 25604888 -60384046 + MER104 DNA Tc2 57 121 -1777 2791 96 8 6 chr18 25604888 25605251 -60383683 - THE1B LTR MaLR 0 364 1 445 180 25 74 chr18 25605251 25605301 -60383633 + MER104 DNA Tc2 121 172 -8 21 0 0 0 chr18 25606297 25606318 -60382616 + AT_rich Low_complexity Low_complexity 1 21 0 2224 136 0 3 chr18 25606322 25606630 -60382304 - AluSx SINE Alu -5 307 1 2054 124 0 16 chr18 25606855 25607169 -60381765 + AluJo SINE Alu 1 309 -3 216 97 0 0 chr18 25607302 25607333 -60381601 + (GGGA)n Simple_repeat Simple_repeat 4 34 0 807 171 16 23 chr18 25608647 25608776 -60380158 - FLAM_C SINE Alu -4 129 2 2163 139 0 0 chr18 25609385 25609695 -60379239 + AluSg SINE Alu 1 310 0 22 35 0 0 chr18 25609746 25609775 -60379159 + AT_rich Low_complexity Low_complexity 1 29 0 418 312 78 0 chr18 25609871 25610012 -60378922 - MIR SINE MIR -48 214 63 849 146 7 51 chr18 25610410 25610547 -60378387 - FLAM_C SINE Alu -2 131 1 476 208 31 0 chr18 25610700 25610796 -60378138 - MER7A DNA MER2_type -248 98 2 251 275 153 51 chr18 25610908 25611219 -60377715 - L2 LINE L2 -193 3079 2737 220 159 43 43 chr18 25611220 25611289 -60377645 + T-rich Low_complexity Low_complexity 5 73 0 609 98 0 59 chr18 25612783 25612885 -60376049 + L1PA10 LINE L1 6073 6168 0 231 182 45 0 chr18 25613062 25613106 -60375828 + GA-rich Low_complexity Low_complexity 5 50 0 200 280 243 0 chr18 25613366 25613473 -60375461 + MIR SINE MIR 20 152 -110 315 0 0 0 chr18 25614296 25614331 -60374603 + (CAA)n Simple_repeat Simple_repeat 2 36 0 180 77 0 0 chr18 25614501 25614527 -60374407 + (A)n Simple_repeat Simple_repeat 1 26 0 1704 157 18 3 chr18 25615067 25615353 -60373581 - L1MB3 LINE L1 -2 6181 5892 1934 137 20 0 chr18 25616279 25616578 -60372356 - AluSx SINE Alu -7 305 1 231 114 0 0 chr18 25616639 25616674 -60372260 + (TG)n Simple_repeat Simple_repeat 1 35 0 189 94 0 0 chr18 25616675 25616707 -60372227 + (T)n Simple_repeat Simple_repeat 1 32 0 198 284 14 27 chr18 25617709 25617783 -60371151 - MIR3 SINE MIR -21 187 115 499 284 28 0 chr18 25617951 25618092 -60370842 - MIR SINE MIR 0 262 118 2242 87 0 55 chr18 25618445 25618757 -60370177 + AluSx SINE Alu 1 295 -17 25 0 0 0 chr18 25620062 25620087 -60368847 + AT_rich Low_complexity Low_complexity 1 25 0 639 295 93 35 chr18 25620390 25620766 -60368168 + MARNA DNA Mariner 54 451 -135 291 271 156 0 chr18 25620858 25620980 -60367954 + MIR3 SINE MIR 66 206 -2 21 0 0 0 chr18 25623039 25623060 -60365874 + GC_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr18 25623207 25623229 -60365705 + GC_rich Low_complexity Low_complexity 1 22 0 205 204 20 51 chr18 25623303 25623401 -60365533 + C-rich Low_complexity Low_complexity 6 100 0 27 87 0 0 chr18 25623501 25623570 -60365364 + GC_rich Low_complexity Low_complexity 1 69 0 267 79 0 0 chr18 25624805 25624843 -60364091 + (TG)n Simple_repeat Simple_repeat 2 39 0 463 292 97 31 chr18 25626620 25626815 -60362119 - L2 LINE L2 0 3313 3106 434 318 92 34 chr18 25627047 25627396 -60361538 - L2 LINE L2 -523 2791 2423 198 280 0 0 chr18 25627543 25627593 -60361341 - L2 LINE L2 -1 3312 3263 2326 109 0 0 chr18 25628465 25628777 -60360157 - AluSx SINE Alu 0 312 1 285 294 28 9 chr18 25628858 25628967 -60359967 - MIR SINE MIR -141 121 11 371 212 92 134 chr18 25629641 25629858 -60359076 + MIR SINE MIR 55 262 0 440 228 50 30 chr18 25629859 25629960 -60358974 + L2 LINE L2 3169 3271 -1 2165 68 4 11 chr18 25630499 25630778 -60358156 + AluSc SINE Alu 29 305 -4 265 305 57 0 chr18 25631235 25631340 -60357594 + MIR SINE MIR 117 227 -35 * 709 243 42 23 chr18 25631327 25631541 -60357393 - MIR SINE MIR -29 233 16 246 270 111 24 chr18 25631579 25631705 -60357229 - MIR SINE MIR -2 260 124 2083 103 0 31 chr18 25632133 25632450 -60356484 + AluSx SINE Alu 1 308 0 2244 102 0 40 chr18 25632730 25633053 -60355881 - AluSg SINE Alu 0 310 1 1066 186 11 5 chr18 25634334 25634522 -60354412 - MER5A DNA MER1_type 0 189 1 1760 170 17 0 chr18 25634586 25634875 -60354059 + AluJo SINE Alu 5 298 -14 747 136 12 130 chr18 25634883 25635045 -60353889 + FRAM SINE Alu 18 160 -16 266 280 189 8 chr18 25635055 25635187 -60353747 - MER103 DNA DNA -9 157 2 213 39 0 0 chr18 25635487 25635513 -60353421 + (TC)n Simple_repeat Simple_repeat 2 27 0 2043 128 10 0 chr18 25635513 25635802 -60353132 - AluSx SINE Alu -20 292 1 282 271 220 23 chr18 25636060 25636237 -60352697 - L2 LINE L2 0 3313 3102 2519 58 0 0 chr18 25636308 25636599 -60352335 - AluY SINE Alu -20 291 1 1505 201 8 63 chr18 25636893 25637272 -60351662 + MLT1A2 LTR MaLR 17 374 0 273 325 0 0 chr18 25638224 25638307 -60350627 + MIR SINE MIR 179 261 -1 221 180 60 0 chr18 25638348 25638398 -60350536 + (TATATG)n Simple_repeat Simple_repeat 1 53 0 1412 183 10 48 chr18 25639805 25640116 -60348818 - AluJb SINE Alu -5 307 9 384 324 150 0 chr18 25640408 25640621 -60348313 + MIR SINE MIR 2 246 -16 194 277 12 60 chr18 25641709 25641792 -60347142 - MIR SINE MIR -169 93 15 633 216 99 13 chr18 25642387 25642564 -60346370 - MIR SINE MIR -62 146 3 394 273 0 0 chr18 25643276 25643375 -60345559 + MIR SINE MIR 56 154 -108 496 158 0 0 chr18 25643644 25643720 -60345214 - MADE1 DNA Mariner -4 76 1 869 281 103 26 chr18 25643937 25644392 -60344542 + MER90 LTR ERV1 118 607 -7 403 235 10 31 chr18 25644527 25644625 -60344309 + MER5A DNA MER1_type 4 99 -90 796 165 252 15 chr18 25645081 25645347 -60343587 + MER96B DNA MER1_type? 44 372 -45 376 279 18 0 chr18 25645411 25645522 -60343412 + MIR SINE MIR 34 146 -116 28 0 0 0 chr18 25645654 25645682 -60343252 + AT_rich Low_complexity Low_complexity 1 28 0 990 249 116 4 chr18 25646147 25646646 -60342288 - L1ME2 LINE L1 -198 5966 5254 230 91 23 0 chr18 25646756 25646800 -60342134 - L1MA7 LINE L1 0 6291 6247 715 317 75 68 chr18 25646905 25647864 -60341070 - L1ME2 LINE L1 -1101 5045 4094 2226 112 3 10 chr18 25647864 25648176 -60340758 - AluSx SINE Alu -2 310 1 715 317 75 68 chr18 25648176 25648201 -60340733 - L1ME2 LINE L1 -2052 4094 4071 2554 54 0 10 chr18 25648201 25648514 -60340420 - AluY SINE Alu -1 310 1 715 317 75 68 chr18 25648514 25648711 -60340223 - L1ME2 LINE L1 -2075 4071 3855 2004 152 17 17 chr18 25648711 25649059 -60339875 + MER7A DNA MER2_type 1 346 0 715 317 75 68 chr18 25649059 25649122 -60339812 - L1ME2 LINE L1 -2291 3855 3794 3124 219 45 24 chr18 25649261 25649652 -60339282 - Charlie1a DNA MER1_type -2028 733 319 1540 165 19 73 chr18 25649652 25649967 -60338967 + AluJo SINE Alu 1 298 -14 3124 219 45 24 chr18 25649967 25650293 -60338641 - Charlie1a DNA MER1_type -2442 319 1 1590 122 14 0 chr18 25650341 25650563 -60338371 + AluSg/x SINE Alu 72 296 -16 327 333 51 17 chr18 25650572 25650749 -60338185 + L2 LINE L2 2909 3091 -181 237 65 0 0 chr18 25651933 25651964 -60336970 + (TG)n Simple_repeat Simple_repeat 2 32 0 221 274 65 0 chr18 25652029 25652091 -60336843 - MIR3 SINE MIR -31 177 112 333 195 13 26 chr18 25652812 25652889 -60336045 + MER116 DNA Mariner 5 80 0 306 0 0 0 chr18 25652985 25653019 -60335915 + (CA)n Simple_repeat Simple_repeat 1 34 0 677 283 48 42 chr18 25653358 25653508 -60335426 + L2 LINE L2 2873 3021 -292 1664 193 7 3 chr18 25653508 25653809 -60335125 + AluJb SINE Alu 2 303 -9 677 283 48 42 chr18 25653809 25654012 -60334922 + L2 LINE L2 3021 3228 -85 464 250 195 83 chr18 25654042 25654426 -60334508 - MLT1K LTR MaLR -11 577 151 2639 105 14 3 chr18 25654612 25654982 -60333952 - THE1C LTR MaLR 0 375 2 10246 108 34 42 chr18 25654983 25656576 -60332358 - THE1C-int LTR MaLR 0 1580 1 2613 103 16 8 chr18 25656578 25656948 -60331986 - THE1C LTR MaLR -2 373 1 287 269 108 85 chr18 25657379 25657766 -60331168 + L2 LINE L2 2825 3220 -93 364 308 31 15 chr18 25658173 25658303 -60330631 - MIR SINE MIR -57 151 20 2540 65 0 3 chr18 25659147 25659455 -60329479 + AluY SINE Alu 1 307 -4 226 257 43 0 chr18 25659912 25659982 -60328952 + MIR SINE MIR 117 189 -73 641 243 42 23 chr18 25660004 25660218 -60328716 - MIR SINE MIR -29 233 16 214 286 111 24 chr18 25660256 25660382 -60328552 - MIR SINE MIR -2 260 124 1883 113 0 75 chr18 25660810 25661130 -60327804 + AluSq SINE Alu 1 296 -17 209 200 108 31 chr18 25662289 25662354 -60326580 + L2 LINE L2 3203 3272 0 189 0 0 0 chr18 25663058 25663079 -60325855 + (A)n Simple_repeat Simple_repeat 1 21 0 2394 91 0 3 chr18 25663716 25664014 -60324920 - AluSg SINE Alu -13 297 1 2003 144 7 3 chr18 25664459 25664764 -60324170 - AluJo SINE Alu -6 306 1 517 273 34 19 chr18 25665348 25665553 -60323381 - MIR SINE MIR -50 212 5 2391 100 3 0 chr18 25666132 25666443 -60322491 + AluSx SINE Alu 1 312 0 1238 37 0 0 chr18 25667122 25667258 -60321676 - AluY SINE Alu -175 136 1 728 206 0 0 chr18 25667269 25667400 -60321534 - FLAM_C SINE Alu 0 133 3 219 88 0 0 chr18 25668403 25668437 -60320497 + (CA)n Simple_repeat Simple_repeat 2 35 0 1677 137 0 97 chr18 25668983 25669164 -60319770 - AluJo SINE Alu -19 293 155 1779 134 40 7 chr18 25669164 25669440 -60319494 - AluJb SINE Alu -27 285 1 1677 137 0 97 chr18 25669440 25669579 -60319355 - AluJo SINE Alu -157 155 4 598 278 79 4 chr18 25669793 25670020 -60318914 + MLT1L LTR MaLR 346 589 -26 1931 156 7 14 chr18 25670473 25670768 -60318166 - AluJo SINE Alu -19 293 1 395 143 0 0 chr18 25670798 25670854 -60318080 - Tigger5 DNA MER2_type 0 2323 2268 220 136 51 85 chr18 25671252 25671311 -60317623 + L2 LINE L2 3216 3272 0 1433 173 76 33 chr18 25671443 25671773 -60317161 + MER2 DNA MER2_type 1 344 0 2306 88 3 0 chr18 25672121 25672406 -60316528 - AluSg SINE Alu -16 294 9 436 74 0 0 chr18 25673086 25673140 -60315794 - Alu SINE Alu -19 291 238 1941 228 104 28 chr18 25673145 25673238 -60315696 - MER20B DNA MER1_type -30 753 668 1556 119 31 8 chr18 25673238 25673498 -60315436 + L1MB3 LINE L1 5918 6183 0 1941 228 104 28 chr18 25673498 25674080 -60314854 - MER20B DNA MER1_type -115 668 27 180 222 0 22 chr18 25674577 25674622 -60314312 + L2 LINE L2 3225 3268 -4 395 300 33 114 chr18 25676116 25676389 -60312545 + L2 LINE L2 3022 3272 0 1026 206 10 111 chr18 25677603 25677909 -60311025 - AluJo SINE Alu -12 300 26 21 36 0 0 chr18 25678017 25678045 -60310889 + AT_rich Low_complexity Low_complexity 1 28 0 219 313 61 10 chr18 25678986 25679085 -60309849 + MIR SINE MIR 50 153 -109 28 29 0 0 chr18 25679864 25679899 -60309035 + AT_rich Low_complexity Low_complexity 1 35 0 2015 155 0 19 chr18 25679992 25680308 -60308626 + AluJo SINE Alu 1 310 -2 265 392 24 51 chr18 25680627 25680733 -60308201 - L2 LINE L2 -93 3179 3072 1628 186 20 3 chr18 25680733 25681034 -60307900 + AluJo SINE Alu 1 306 -6 265 392 24 51 chr18 25681034 25681182 -60307752 - L2 LINE L2 -200 3072 2932 1325 241 132 34 chr18 25681220 25681635 -60307299 - MLT1H LTR MaLR -34 515 47 4133 103 44 2 chr18 25681635 25682220 -60306714 + MER4B LTR ERV1 1 610 0 1325 241 132 34 chr18 25682220 25682273 -60306661 - MLT1H LTR MaLR -502 47 1 468 48 0 0 chr18 25682289 25682352 -60306582 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 1268 266 50 56 chr18 25682771 25683158 -60305776 + MLT1J LTR MaLR 31 419 -92 6534 76 19 35 chr18 25683158 25684273 -60304661 - L1PA14 LINE L1 0 6161 5031 387 0 0 0 chr18 25684273 25684316 -60304618 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2054 131 0 7 chr18 25684318 25684609 -60304325 - AluSx SINE Alu -23 289 1 6534 76 19 35 chr18 25684609 25684621 -60304313 - L1PA14 LINE L1 -1131 5030 5019 1868 160 7 10 chr18 25684621 25684921 -60304013 - AluJb SINE Alu -13 299 1 6534 76 19 35 chr18 25684921 25685196 -60303738 - L1PA14 LINE L1 -1142 5019 4740 1268 266 50 56 chr18 25685196 25685292 -60303642 + MLT1J LTR MaLR 419 511 0 3923 202 98 10 chr18 25685566 25686715 -60302219 + L1MB7 LINE L1 3589 4860 -1286 240 35 0 0 chr18 25686715 25686744 -60302190 + (T)n Simple_repeat Simple_repeat 1 29 0 3591 171 17 39 chr18 25688755 25689574 -60299360 + L1MB7 LINE L1 4847 5627 -557 306 0 0 0 chr18 25689574 25689608 -60299326 + (TG)n Simple_repeat Simple_repeat 2 35 0 3591 171 17 39 chr18 25689608 25689970 -60298964 + L1MB7 LINE L1 5627 5996 -188 322 239 0 0 chr18 25689981 25690048 -60298886 + L1MB7 LINE L1 5967 6033 -151 906 275 69 26 chr18 25690054 25690126 -60298808 - L1MC4 LINE L1 -1192 6850 6783 2129 126 17 0 chr18 25690126 25690420 -60298514 + AluSx SINE Alu 1 299 -13 906 275 69 26 chr18 25690420 25690652 -60298282 - L1MC4 LINE L1 -1259 6783 6533 297 335 68 34 chr18 25691345 25691521 -60297413 - MIR SINE MIR -69 193 12 1754 170 5 81 chr18 25691586 25691980 -60296954 - MLT1A2 LTR MaLR -6 368 5 1804 163 3 31 chr18 25692000 25692320 -60296614 - AluJo SINE Alu -1 311 1 673 306 15 0 chr18 25692561 25692767 -60296167 - MLT1J LTR MaLR -302 209 1 297 185 0 0 chr18 25692977 25693031 -60295903 - MLT2D LTR ERVL 0 554 501 223 281 0 16 chr18 25693044 25693108 -60295826 + G-rich Low_complexity Low_complexity 6 68 0 1734 185 77 3 chr18 25693108 25693448 -60295486 - MLT2D LTR ERVL -48 366 2 993 140 0 0 chr18 25694139 25694402 -60294532 + (TCC)n Simple_repeat Simple_repeat 1 441 0 993 140 0 0 chr18 25694402 25694580 -60294354 + (TCC)n Simple_repeat Simple_repeat 3 180 0 978 144 0 0 chr18 25694673 25694853 -60294081 + (TCC)n Simple_repeat Simple_repeat 1 180 0 362 274 57 0 chr18 25695196 25695302 -60293632 - MIR SINE MIR -119 143 32 317 261 36 9 chr18 25695428 25695539 -60293395 - L2 LINE L2 -2499 815 702 1564 171 42 21 chr18 25696783 25697070 -60291864 + AluJo SINE Alu 1 293 -19 23 33 0 0 chr18 25697223 25697253 -60291681 + AT_rich Low_complexity Low_complexity 1 30 0 1198 287 128 38 chr18 25697641 25697722 -60291212 - MLT1L LTR MaLR -8 607 535 1971 129 7 18 chr18 25697722 25698039 -60290895 + AluSx SINE Alu 1 314 0 1198 287 128 38 chr18 25698039 25698513 -60290421 - MLT1L LTR MaLR -80 535 1 375 303 81 0 chr18 25698626 25698811 -60290123 + MIR SINE MIR 60 259 -3 384 217 24 12 chr18 25699680 25699763 -60289171 + Charlie1 DNA MER1_type 1 84 -2677 594 93 0 0 chr18 25699763 25699849 -60289085 + (TTCCC)n Simple_repeat Simple_repeat 1 86 0 503 240 144 7 chr18 25699849 25699995 -60288939 - FRAM SINE Alu 0 166 1 14008 114 16 11 chr18 25699997 25702062 -60286872 - Tigger1 DNA MER2_type -332 2086 11 979 131 82 58 chr18 25702088 25702294 -60286640 - AluJo SINE Alu -14 298 88 206 320 58 0 chr18 25702611 25702714 -60286220 - MIR3 SINE MIR -17 191 83 495 232 32 0 chr18 25703479 25703604 -60285330 + L2 LINE L2 3183 3311 -2 1379 150 104 7 chr18 25703643 25703930 -60285004 - MER33 DNA MER1_type -9 315 1 2388 116 0 0 chr18 25704718 25705029 -60283905 - AluSx SINE Alu -1 311 1 995 259 70 39 chr18 25705336 25705854 -60283080 - L1MC4a LINE L1 -1887 5921 5325 1709 173 3 20 chr18 25705854 25706155 -60282779 - AluJb SINE Alu -16 296 1 995 259 70 39 chr18 25706155 25706221 -60282713 - L1MC4a LINE L1 -2483 5325 5262 29 78 0 0 chr18 25706281 25706345 -60282589 + AT_rich Low_complexity Low_complexity 1 64 0 548 212 124 0 chr18 25706398 25706511 -60282423 - FLAM_A SINE Alu -6 127 1 449 176 24 88 chr18 25706511 25706583 -60282351 - L2 LINE L2 -10 3303 3241 1733 184 0 33 chr18 25706583 25706887 -60282047 + AluJb SINE Alu 1 294 -18 449 176 24 88 chr18 25706887 25706939 -60281995 - L2 LINE L2 -72 3241 3187 1288 186 35 58 chr18 25707120 25707464 -60281470 - MER58B DNA MER1_type -3 338 3 441 283 105 0 chr18 25707846 25708037 -60280897 + L2 LINE L2 3103 3313 0 180 0 0 0 chr18 25708855 25708875 -60280059 + (TG)n Simple_repeat Simple_repeat 1 20 0 219 208 97 42 chr18 25708937 25709009 -60279925 - L2 LINE L2 -8 3305 3230 1188 125 17 0 chr18 25709916 25710092 -60278842 + AluSg/x SINE Alu 132 310 -2 1378 176 6 104 chr18 25710279 25710597 -60278337 + AluJo SINE Alu 13 299 -13 2231 127 3 0 chr18 25711516 25711816 -60277118 - AluSq SINE Alu -12 301 1 21 0 0 0 chr18 25711867 25711888 -60277046 + AT_rich Low_complexity Low_complexity 1 21 0 223 294 28 55 chr18 25711911 25712020 -60276914 - L2 LINE L2 -219 3053 2948 288 220 66 44 chr18 25712137 25712228 -60276706 - MIR SINE MIR -98 110 18 189 327 0 0 chr18 25712273 25712325 -60276609 - L2 LINE L2 -104 3168 3117 238 312 80 32 chr18 25712325 25712450 -60276484 - L2 LINE L2 -4 3309 3179 658 242 199 5 chr18 25712601 25712812 -60276122 - MIR SINE MIR -8 254 3 192 271 136 40 chr18 25712824 25713001 -60275933 - L2 LINE L2 -188 3084 2891 1791 165 76 22 chr18 25713427 25713797 -60275137 + MLT1B LTR MaLR 1 390 0 1389 160 38 100 chr18 25713862 25714181 -60274753 + AluJb SINE Alu 1 299 -13 523 263 179 50 chr18 25715268 25715625 -60273309 - L1MC4a LINE L1 -1906 5902 5500 771 253 6 6 chr18 25715839 25716017 -60272917 + MER5B DNA MER1_type 1 178 0 333 132 0 0 chr18 25716341 25716394 -60272540 - MER5B DNA MER1_type -123 55 3 480 198 87 0 chr18 25716882 25717008 -60271926 + MER5A DNA MER1_type 3 139 -50 6618 71 47 26 chr18 25717019 25717473 -60271461 - L1MA2 LINE L1 0 6304 5861 2477 78 0 7 chr18 25717473 25717782 -60271152 - AluSc SINE Alu -2 307 1 6618 71 47 26 chr18 25717782 25718270 -60270664 - L1MA2 LINE L1 -443 5861 5343 227 286 0 0 chr18 25718278 25718334 -60270600 + MER5A DNA MER1_type 134 189 0 495 243 43 81 chr18 25718762 25718947 -60269987 + MER5A DNA MER1_type 1 178 -11 282 282 159 35 chr18 25719580 25719798 -60269136 + MIR SINE MIR 15 254 -8 317 200 0 0 chr18 25719832 25719892 -60269042 + L1ME4a LINE L1 6061 6120 -1 376 209 38 29 chr18 25720863 25720968 -60267966 - L1ME LINE L1 -460 5661 5556 924 90 0 0 chr18 25720972 25721094 -60267840 - AluSp/q SINE Alu -4 309 188 327 143 40 48 chr18 25722142 25722268 -60266666 + CT-rich Low_complexity Low_complexity 4 128 0 461 161 28 44 chr18 25722286 25722466 -60266468 + CT-rich Low_complexity Low_complexity 3 179 0 188 234 202 11 chr18 25722489 25722583 -60266351 + MIR SINE MIR 3 114 -148 632 233 131 24 chr18 25722687 25722893 -60266041 - MIR SINE MIR -31 231 4 246 193 34 227 chr18 25722938 25723057 -60265877 - L2 LINE L2 -17 3296 3201 1597 156 4 19 chr18 25723175 25723445 -60265489 + AluJb SINE Alu 47 312 0 399 21 0 0 chr18 25725818 25725866 -60263068 + (TG)n Simple_repeat Simple_repeat 2 49 0 31 58 0 0 chr18 25727360 25727412 -60261522 + GC_rich Low_complexity Low_complexity 1 52 0 30 45 0 0 chr18 25727976 25728020 -60260914 + GC_rich Low_complexity Low_complexity 1 44 0 462 135 0 48 chr18 25728049 25728175 -60260759 + (GGA)n Simple_repeat Simple_repeat 2 121 0 25 31 0 0 chr18 25728306 25728338 -60260596 + GC_rich Low_complexity Low_complexity 1 32 0 187 283 17 33 chr18 25730402 25730462 -60258472 - L2 LINE L2 -95 3177 3119 218 200 0 18 chr18 25730484 25730539 -60258395 + MIR SINE MIR 81 134 -74 187 211 0 0 chr18 25733292 25733330 -60255604 - L2 LINE L2 -1 3312 3275 2715 126 41 14 chr18 25735509 25735947 -60252987 - Tigger2 DNA MER2_type 0 2718 2269 449 159 0 0 chr18 25735933 25736002 -60252932 - Tigger2 DNA MER2_type -2649 69 1 * 333 226 60 12 chr18 25736949 25737033 -60251901 + MER5A DNA MER1_type 17 104 -85 540 305 11 23 chr18 25737104 25737281 -60251653 - MIR SINE MIR -70 192 18 474 249 259 0 chr18 25737563 25737768 -60251166 + MIR SINE MIR 5 262 0 2493 79 0 0 chr18 25738156 25738459 -60250475 - AluSq SINE Alu -10 303 1 182 239 0 22 chr18 25739653 25739666 -60249268 - L2 LINE L2 -4 3309 3265 191 182 0 0 chr18 25739666 25739699 -60249235 - MIR SINE MIR -10 252 220 193 389 25 31 chr18 25740352 25740514 -60248420 - L2 LINE L2 -5 3267 3107 230 156 0 22 chr18 25740555 25740600 -60248334 - MIR SINE MIR -99 163 120 189 0 0 0 chr18 25742575 25742596 -60246338 + (T)n Simple_repeat Simple_repeat 1 21 0 1767 146 4 4 chr18 25742624 25742892 -60246042 + AluJb SINE Alu 1 268 -44 262 257 40 0 chr18 25743359 25743433 -60245501 - MIR SINE MIR -87 121 45 379 303 115 8 chr18 25743440 25743562 -60245372 - L2 LINE L2 0 3272 3138 2006 134 23 3 chr18 25743860 25744165 -60244769 + AluJo SINE Alu 1 311 -1 194 313 0 0 chr18 25744726 25744774 -60244160 + L3 LINE CR1 1530 1577 0 872 125 8 16 chr18 25745068 25745209 -60243725 - FLAM_C SINE Alu 0 144 5 385 305 34 8 chr18 25745346 25745464 -60243470 + L2 LINE L2 3192 3312 -1 207 244 0 0 chr18 25745644 25745685 -60243249 - L2 LINE L2 -15 3298 3258 726 328 139 14 chr18 25747318 25747892 -60241042 - L2 LINE L2 -958 2356 1711 1857 186 18 3 chr18 25748599 25748932 -60240002 - L1MC1 LINE L1 -16 6317 5980 280 254 70 44 chr18 25750391 25750505 -60238429 - L2 LINE L2 -20 3252 3136 883 230 0 0 chr18 25750538 25750686 -60238248 + FRAM SINE Alu 1 148 -18 22 0 0 0 chr18 25751567 25751589 -60237345 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr18 25752756 25752786 -60236148 + AT_rich Low_complexity Low_complexity 1 30 0 770 211 0 0 chr18 25752786 25752919 -60236015 - FLAM_A SINE Alu 0 133 1 284 293 33 67 chr18 25752929 25753079 -60235855 - MIR SINE MIR -46 216 72 266 206 175 0 chr18 25753188 25753251 -60235683 - MER103 DNA DNA -86 80 7 22 56 0 0 chr18 25753365 25753401 -60235533 + AT_rich Low_complexity Low_complexity 1 36 0 585 258 42 27 chr18 25753504 25753709 -60235225 + MIR SINE MIR 55 262 0 2852 163 13 9 chr18 25753865 25754330 -60234604 - MLT1C LTR MaLR 0 467 1 390 238 113 20 chr18 25754433 25754450 -60234484 - L1MA10 LINE L1 0 6334 6318 941 217 72 65 chr18 25754450 25754726 -60234208 - L1ME2 LINE L1 -9 6155 5878 231 278 113 17 chr18 25754852 25754967 -60233967 - MIR SINE MIR -10 252 127 286 306 24 0 chr18 25755106 25755191 -60233743 + MIR SINE MIR 164 250 -12 227 269 172 11 chr18 25756194 25756287 -60232647 + MIR3 SINE MIR 85 192 -16 876 136 0 0 chr18 25757586 25757704 -60231230 + FLAM_C SINE Alu 6 123 -20 1680 93 5 0 chr18 25757860 25758074 -60230860 + AluSg SINE Alu 1 215 -95 352 67 0 0 chr18 25758075 25758120 -60230814 + AluSg SINE Alu 250 294 -7 314 276 57 19 chr18 25758290 25758395 -60230539 - L2 LINE L2 -8 3305 3197 2419 103 43 57 chr18 25758555 25758740 -60230194 - THE1B LTR MaLR 0 364 185 2467 90 0 3 chr18 25758740 25759050 -60229884 - AluSp SINE Alu -4 309 1 2419 103 43 57 chr18 25759050 25759233 -60229701 - THE1B LTR MaLR -179 185 1 201 293 0 57 chr18 25760220 25760326 -60228608 + CT-rich Low_complexity Low_complexity 3 102 0 2293 84 7 14 chr18 25760625 25760921 -60228013 + AluSx SINE Alu 12 305 -7 1703 200 10 0 chr18 25761848 25762153 -60226781 - AluJo SINE Alu -4 308 1 478 316 38 0 chr18 25762694 25762852 -60226082 - MIR3 SINE MIR -1 207 44 2528 47 0 0 chr18 25763037 25763333 -60225601 + AluY SINE Alu 1 296 -15 1953 145 7 0 chr18 25763436 25763725 -60225209 - AluSx SINE Alu -21 291 1 22 0 0 0 chr18 25763957 25763979 -60224955 + AT_rich Low_complexity Low_complexity 1 22 0 2130 123 3 0 chr18 25764021 25764314 -60224620 + AluSx SINE Alu 1 294 -18 214 289 66 13 chr18 25764742 25764818 -60224116 + MIR SINE MIR 72 151 -111 254 272 26 35 chr18 25765406 25765520 -60223414 - L1ME4a LINE L1 -65 6056 5944 306 311 93 42 chr18 25766422 25766615 -60222319 - MIR SINE MIR -29 233 31 688 117 109 0 chr18 25766893 25767021 -60221913 + L1MA5 LINE L1 6159 6300 0 26 30 0 0 chr18 25767021 25767054 -60221880 + AT_rich Low_complexity Low_complexity 1 33 0 209 269 0 0 chr18 25767344 25767396 -60221538 + L2 LINE L2 3261 3312 -1 180 0 0 0 chr18 25767694 25767714 -60221220 + (GA)n Simple_repeat Simple_repeat 1 20 0 486 240 186 6 chr18 25768491 25768674 -60220260 - L1ME2 LINE L1 -77 6087 5872 1264 181 0 28 chr18 25768805 25769053 -60219881 + AluJo SINE Alu 59 299 -13 839 163 91 91 chr18 25769177 25769235 -60219699 - MER3 DNA MER1_type 0 209 152 2303 78 3 0 chr18 25769235 25769540 -60219394 - AluSq SINE Alu 0 306 1 839 163 91 91 chr18 25769540 25769689 -60219245 - MER3 DNA MER1_type -56 153 1 356 288 47 90 chr18 25770006 25770239 -60218695 + L2 LINE L2 3034 3256 -16 1937 131 0 24 chr18 25770242 25770556 -60218378 + AluSx SINE Alu 1 307 0 1877 160 7 14 chr18 25770567 25770860 -60218074 + AluJo SINE Alu 3 293 -19 594 278 79 4 chr18 25771313 25771540 -60217394 - MLT1L LTR MaLR -26 589 346 1658 137 0 97 chr18 25771754 25771893 -60217041 + AluJo SINE Alu 4 96 -216 1763 134 40 7 chr18 25771893 25772169 -60216765 + AluJb SINE Alu 1 285 -27 1658 137 0 97 chr18 25772169 25772350 -60216584 + AluJo SINE Alu 96 293 -19 219 88 0 0 chr18 25772896 25772930 -60216004 + (TG)n Simple_repeat Simple_repeat 2 35 0 878 178 0 0 chr18 25773933 25774075 -60214859 + AluJb SINE Alu 3 145 -164 2598 44 0 0 chr18 25774075 25774372 -60214562 + AluY SINE Alu 1 297 -14 1606 193 3 13 chr18 25775978 25776289 -60212645 - AluJo SINE Alu -4 308 1 893 146 0 15 chr18 25776289 25776426 -60212508 - AluJo SINE Alu -177 135 1 1474 164 84 0 chr18 25777706 25778005 -60210929 + MER33 DNA MER1_type 1 324 0 346 177 51 0 chr18 25779386 25779465 -60209469 + MER5B DNA MER1_type 19 101 -77 249 33 0 0 chr18 25779653 25779683 -60209251 + (TG)n Simple_repeat Simple_repeat 1 30 0 735 197 0 8 chr18 25780115 25780247 -60208687 + MER115 DNA AcHobo 563 693 0 1365 125 5 0 chr18 25781965 25782165 -60206769 + AluJb SINE Alu 104 304 -8 396 0 0 0 chr18 25782202 25782246 -60206688 + (T)n Simple_repeat Simple_repeat 1 44 0 25 31 0 0 chr18 25782534 25782566 -60206368 + AT_rich Low_complexity Low_complexity 1 32 0 307 252 140 19 chr18 25783651 25783758 -60205176 - MIR SINE MIR -112 150 31 189 0 0 0 chr18 25785433 25785454 -60203480 + (T)n Simple_repeat Simple_repeat 1 21 0 726 195 9 68 chr18 25785547 25785768 -60203166 - L1MC5 LINE L1 -30 7931 7724 2466 68 0 0 chr18 25785884 25786177 -60202757 + AluY SINE Alu 5 297 -14 1620 193 3 13 chr18 25787791 25788102 -60200832 - AluJo SINE Alu -4 308 1 900 146 0 15 chr18 25788102 25788239 -60200695 - AluJo SINE Alu -177 135 1 1394 164 84 0 chr18 25789519 25789818 -60199116 + MER33 DNA MER1_type 1 324 0 319 177 51 0 chr18 25791199 25791278 -60197656 + MER5B DNA MER1_type 19 101 -77 249 33 0 0 chr18 25791466 25791496 -60197438 + (TG)n Simple_repeat Simple_repeat 1 30 0 730 197 0 8 chr18 25791928 25792060 -60196874 + MER115 DNA AcHobo 563 693 0 2049 157 0 3 chr18 25793836 25794149 -60194785 - AluJo SINE Alu 0 312 1 246 49 219 0 chr18 25794326 25794367 -60194567 - MADE1 DNA Mariner 0 80 31 2032 103 10 10 chr18 25794370 25794672 -60194262 + L1MA2 LINE L1 5999 6300 -4 204 256 12 49 chr18 25795393 25795475 -60193459 - MIR SINE MIR -87 175 97 1548 138 110 0 chr18 25795583 25795885 -60193049 - AluJb SINE Alu 0 330 1 1750 169 21 3 chr18 25795984 25796268 -60192666 - AluJb SINE Alu -19 293 5 258 242 16 0 chr18 25796287 25796349 -60192585 - MER5B DNA MER1_type -81 97 35 2209 109 0 7 chr18 25797184 25797477 -60191457 + AluSx SINE Alu 1 291 -21 290 148 0 37 chr18 25797534 25797588 -60191346 + L2 LINE L2 3262 3313 0 547 207 63 0 chr18 25798696 25798807 -60190127 + FLAM_C SINE Alu 2 119 -24 346 278 43 26 chr18 25799484 25799599 -60189335 - MIR3 SINE MIR -28 180 64 2211 115 3 3 chr18 25800370 25800666 -60188268 - AluSq SINE Alu -17 296 1 376 165 102 87 chr18 25800677 25800804 -60188130 - FLAM_C SINE Alu -4 129 1 2418 94 0 0 chr18 25800834 25801142 -60187792 - AluSg SINE Alu -2 308 1 381 255 10 10 chr18 25801142 25801244 -60187690 + MLT1K LTR MaLR 485 586 -2 218 313 0 24 chr18 25802450 25802533 -60186401 + L2 LINE L2 2918 2998 -274 195 42 0 0 chr18 25804310 25804334 -60184600 + (A)n Simple_repeat Simple_repeat 1 24 0 284 296 9 19 chr18 25804367 25804475 -60184459 + MIR SINE MIR 151 257 -5 707 253 104 17 chr18 25804697 25804938 -60183996 + MIR SINE MIR 1 262 0 2523 61 0 0 chr18 25805639 25805934 -60183000 - AluY SINE Alu -16 295 1 685 177 0 32 chr18 25807709 25807833 -60181101 - AluJo SINE Alu -147 165 46 1417 178 95 3 chr18 25809397 25809756 -60179178 - Charlie5 DNA MER1_type 0 2624 2233 607 158 16 47 chr18 25809756 25809883 -60179051 - Charlie5 DNA MER1_type -2489 123 1 269 270 88 7 chr18 25810263 25810400 -60178534 - L1ME4a LINE L1 -4 6117 5970 1167 185 11 164 chr18 25810445 25810811 -60178123 + Charlie1a DNA MER1_type 18 326 -1129 216 0 0 0 chr18 25810811 25810835 -60178099 + (T)n Simple_repeat Simple_repeat 1 24 0 45 34 0 0 chr18 25810853 25810912 -60178022 + GC_rich Low_complexity Low_complexity 1 59 0 374 296 21 7 chr18 25813468 25813610 -60175324 - MIR SINE MIR -117 145 2 2257 179 20 0 chr18 25815575 25815967 -60172967 - MER70B LTR ERVL -109 469 70 1859 158 0 0 chr18 25815967 25816239 -60172695 - AluJb SINE Alu -12 300 29 235 211 0 19 chr18 25817770 25817822 -60171112 - 7SLRNA srpRNA srpRNA -65 255 205 1394 204 18 46 chr18 25817922 25818251 -60170683 - MLT1A2 LTR MaLR -54 320 1 2079 123 0 7 chr18 25819340 25819669 -60169265 - AluSx SINE Alu 0 327 1 196 310 50 10 chr18 25819731 25819831 -60169103 + L2 LINE L2 2228 2331 -983 5124 122 55 6 chr18 25821565 25822501 -60166433 + L1PA13 LINE L1 5176 6163 0 550 246 0 9 chr18 25822502 25822616 -60166318 - FLAM_A SINE Alu -17 116 4 857 258 61 0 chr18 25822619 25822817 -60166117 + MER74A LTR ERVL 17 226 -332 376 362 15 41 chr18 25822917 25823188 -60165746 - L3 LINE CR1 -63 1514 1251 749 319 44 26 chr18 25823288 25823427 -60165507 + L1ME2 LINE L1 5258 5393 -771 748 189 0 0 chr18 25823427 25823559 -60165375 + FLAM_C SINE Alu 1 132 -1 749 319 44 26 chr18 25823559 25824036 -60164898 + L1ME2 LINE L1 5393 5897 -267 2140 104 10 39 chr18 25824978 25825286 -60163648 + AluSq SINE Alu 4 302 -11 270 191 103 71 chr18 25825495 25825576 -60163358 + L1MC/D LINE L1 5351 5439 -2369 2262 112 7 3 chr18 25825576 25825880 -60163054 + AluSg SINE Alu 1 305 -5 270 191 103 71 chr18 25825880 25825924 -60163010 + L1MC/D LINE L1 5439 5480 -2328 935 222 14 32 chr18 25826174 25826395 -60162539 - L1M4 LINE L1 -1984 4162 3946 876 146 46 91 chr18 25826438 25826657 -60162277 - L1MC1 LINE L1 -28 6305 6097 2206 106 3 0 chr18 25826658 25826942 -60161992 - AluSx SINE Alu -27 285 1 334 324 22 38 chr18 25826942 25827127 -60161807 - L1MEd LINE L1 -5060 1059 878 230 255 0 0 chr18 25827487 25827538 -60161396 - L2 LINE L2 -30 3242 3192 703 205 95 9 chr18 25827685 25827895 -60161039 + L1M4 LINE L1 2922 3149 -2997 1755 133 22 66 chr18 25827948 25828265 -60160669 + AluJo SINE Alu 1 303 -9 375 287 168 0 chr18 25828266 25828409 -60160525 + L1M4 LINE L1 3236 3402 -2744 1264 91 6 11 chr18 25828417 25828593 -60160341 + AluSg/x SINE Alu 119 293 -17 219 258 167 0 chr18 25828751 25828817 -60160117 + MIR3 SINE MIR 111 187 -21 22 0 0 0 chr18 25830840 25830862 -60158072 + AT_rich Low_complexity Low_complexity 1 22 0 2331 113 0 0 chr18 25832081 25832381 -60156553 + AluSx SINE Alu 1 300 -12 24 53 0 0 chr18 25832637 25832675 -60156259 + AT_rich Low_complexity Low_complexity 1 38 0 1636 166 3 48 chr18 25833711 25834025 -60154909 + AluJo SINE Alu 1 300 -12 416 343 0 0 chr18 25834056 25834202 -60154732 - L2 LINE L2 -246 3067 2922 2165 114 3 3 chr18 25834205 25834503 -60154431 + AluSg SINE Alu 1 298 -12 788 248 93 5 chr18 25834508 25834722 -60154212 - MLT1H LTR MaLR -1 548 316 431 225 0 11 chr18 25834876 25834965 -60153969 - Tigger5 DNA MER2_type -2 2321 2234 236 343 20 0 chr18 25835542 25835641 -60153293 - L2 LINE L2 -48 3224 3124 217 381 0 10 chr18 25837050 25837147 -60151787 + MIR SINE MIR 3 98 -164 203 313 159 40 chr18 25837200 25837376 -60151558 + MIR SINE MIR 42 238 -24 252 239 65 43 chr18 25837439 25837531 -60151403 + MIR SINE MIR 87 180 -82 12592 62 5 1 chr18 25837886 25839552 -60149382 + L1P LINE L1 2882 4553 -1593 184 330 125 0 chr18 25839746 25839834 -60149100 + MIR SINE MIR 110 208 -54 218 205 0 0 chr18 25840075 25840114 -60148820 + (TATATG)n Simple_repeat Simple_repeat 2 40 0 356 261 45 0 chr18 25840114 25840202 -60148732 + L1MC4 LINE L1 6614 6705 -1337 262 0 0 0 chr18 25840532 25840561 -60148373 - L1P LINE L1 -753 5419 5391 2947 69 2 17 chr18 25840561 25840943 -60147991 + L1PA8 LINE L1 5775 6161 -11 1276 61 6 6 chr18 25840943 25841123 -60147811 + (GAA)n Simple_repeat Simple_repeat 1 180 0 528 16 0 0 chr18 25841123 25841184 -60147750 + (GGAGAA)n Simple_repeat Simple_repeat 1 61 0 2947 69 2 17 chr18 25841184 25841204 -60147730 + L1PA8 LINE L1 6159 6172 0 308 294 44 144 chr18 25841638 25841978 -60146956 + L2 LINE L2 2941 3246 -26 5830 236 16 7 chr18 25842580 25844214 -60144720 - L1PA15-16 LINE L1 -2383 4466 2817 376 176 0 0 chr18 25844317 25844385 -60144549 - L1PA15-16 LINE L1 -4061 2788 2721 266 357 20 6 chr18 25844842 25845005 -60143929 + MIR SINE MIR 42 205 -56 185 346 107 25 chr18 25845637 25845796 -60143138 - L3b LINE CR1 -188 1395 1224 4866 144 25 11 chr18 25845824 25847111 -60141823 + L1P LINE L1 4 3004 -3142 187 376 0 11 chr18 25847440 25847533 -60141401 + MIR3 SINE MIR 111 202 -6 336 311 121 32 chr18 25848062 25848409 -60140525 + L2 LINE L2 2181 2558 -756 1041 295 120 25 chr18 25848468 25849165 -60139769 + L2 LINE L2 2303 3067 -246 2434 137 2 19 chr18 25849362 25849787 -60139147 - L1MA9 LINE L1 -628 5684 5267 553 113 0 0 chr18 25849787 25849867 -60139067 + L1MA9 LINE L1 5701 5780 -554 211 132 73 0 chr18 25849909 25849977 -60138957 + (TA)n Simple_repeat Simple_repeat 1 73 0 974 172 0 6 chr18 25849977 25850151 -60138783 + L1MA9 LINE L1 5783 5955 -357 1428 136 29 15 chr18 25850154 25850427 -60138507 + L1MA9 LINE L1 6036 6312 0 594 155 26 17 chr18 25851169 25851285 -60137649 - L1MB1 LINE L1 -1 6167 6051 225 253 107 0 chr18 25851285 25851360 -60137574 + L1MB2 LINE L1 5980 6062 -109 1799 160 0 35 chr18 25851799 25852118 -60136816 + AluJb SINE Alu 3 310 -2 22 0 0 0 chr18 25852227 25852249 -60136685 + AT_rich Low_complexity Low_complexity 1 22 0 2106 119 28 0 chr18 25852656 25852941 -60135993 + AluSx SINE Alu 3 295 -17 1015 235 23 4 chr18 25852962 25853222 -60135712 + Charlie5 DNA MER1_type 1 265 -2347 556 204 45 6 chr18 25853220 25853396 -60135538 + Charlie5 DNA MER1_type 2403 2585 -27 * 2996 138 45 14 chr18 25853524 25854081 -60134853 + L1MB3 LINE L1 5609 6182 -1 22 0 0 0 chr18 25854081 25854103 -60134831 + AT_rich Low_complexity Low_complexity 1 22 0 1452 187 50 15 chr18 25854667 25855004 -60133930 + L1MB3 LINE L1 5834 6182 -1 22 0 0 0 chr18 25855004 25855026 -60133908 + AT_rich Low_complexity Low_complexity 1 22 0 255 250 0 73 chr18 25857541 25857609 -60131325 + MIR SINE MIR 46 108 -154 801 179 94 60 chr18 25857656 25857857 -60131077 + MER63A DNA MER1_type 1 208 -2 306 335 122 0 chr18 25857858 25858046 -60130888 + MIR SINE MIR 46 256 -6 463 356 92 59 chr18 25858099 25859277 -60129657 + L2 LINE L2 1711 2927 -387 317 375 64 47 chr18 25859338 25859634 -60129300 + L2 LINE L2 2935 3235 -37 285 359 168 0 chr18 25861456 25861665 -60127269 - L3 LINE CR1 -1 1576 1333 221 233 97 58 chr18 25862456 25862559 -60126375 + MIR3 SINE MIR 2 108 -100 297 0 0 0 chr18 25862792 25862825 -60126109 + (TG)n Simple_repeat Simple_repeat 2 34 0 24 0 0 0 chr18 25863720 25863744 -60125190 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr18 25863783 25863816 -60125118 + AT_rich Low_complexity Low_complexity 1 33 0 1343 238 20 23 chr18 25864849 25865202 -60123732 + L1 LINE L1 2427 2778 -3368 1519 198 65 112 chr18 25866383 25866538 -60122396 + MLT1F LTR MaLR 17 178 -364 1406 208 13 33 chr18 25866538 25866841 -60122093 + AluJo SINE Alu 5 301 -11 1519 198 65 112 chr18 25866841 25867205 -60121729 + MLT1F LTR MaLR 178 512 -30 229 213 0 25 chr18 25867640 25867720 -60121214 + (TA)n Simple_repeat Simple_repeat 2 79 0 187 274 0 20 chr18 25868300 25868351 -60120583 - MIR SINE MIR -116 92 43 234 0 0 0 chr18 25868740 25868766 -60120168 + (TG)n Simple_repeat Simple_repeat 2 27 0 23 0 0 0 chr18 25868835 25868858 -60120076 + AT_rich Low_complexity Low_complexity 1 23 0 269 314 186 0 chr18 25869006 25869200 -60119734 - MIR SINE MIR -13 249 20 399 311 40 7 chr18 25869242 25869390 -60119544 + MIR SINE MIR 53 205 -57 832 248 101 87 chr18 25871198 25871691 -60117243 + MLT1H1 LTR MaLR 44 543 -12 785 197 0 0 chr18 25873600 25873727 -60115207 - FLAM_A SINE Alu -6 127 1 500 88 15 0 chr18 25873876 25873944 -60114990 + MER84 LTR ERVI 1 69 -438 497 317 201 26 chr18 25874228 25874572 -60114362 + MER115 DNA AcHobo 32 435 -258 1711 131 26 9 chr18 25874590 25874970 -60113964 + MER84 LTR ERVI 5 451 -56 6320 37 1 0 chr18 25874970 25875723 -60113211 - L1PA5 LINE L1 -6 6148 5395 343 209 30 0 chr18 25875723 25875790 -60113144 + MER84 LTR ERVI 439 507 0 371 305 86 37 chr18 25875886 25876073 -60112861 - MIR SINE MIR -59 203 8 320 342 40 0 chr18 25879038 25879187 -60109747 + MIR SINE MIR 37 191 -71 600 213 0 57 chr18 25879259 25879400 -60109534 - FLAM_C SINE Alu 0 133 1 207 0 0 0 chr18 25880257 25880280 -60108654 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 207 0 0 0 chr18 25881103 25881126 -60107808 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 23 0 0 0 chr18 25881878 25881901 -60107033 + AT_rich Low_complexity Low_complexity 1 23 0 337 229 177 0 chr18 25883904 25884000 -60104934 + MER45A DNA AcHobo 53 165 -13 203 196 71 71 chr18 25884233 25884289 -60104645 - L2 LINE L2 -3 3310 3255 603 266 126 48 chr18 25884426 25884840 -60104094 + LTR33A LTR ERVL 1 446 -77 181 269 0 19 chr18 25885191 25885243 -60103691 + L2 LINE L2 3255 3305 -8 180 272 61 61 chr18 25886188 25886302 -60102632 + L3 LINE CR1 535 648 -929 351 296 197 7 chr18 25886717 25886869 -60102065 + MER5A DNA MER1_type 9 189 0 318 189 54 14 chr18 25888598 25888746 -60100188 + (TA)n Simple_repeat Simple_repeat 2 155 0 210 105 0 0 chr18 25888986 25889024 -60099910 + (T)n Simple_repeat Simple_repeat 1 38 0 2024 151 135 3 chr18 25891769 25892147 -60096787 - MSTA LTR MaLR 0 428 1 415 229 0 0 chr18 25892365 25892448 -60096486 + MER82 DNA MER2_type 14 96 -557 321 300 113 27 chr18 25892539 25892689 -60096245 - MIR SINE MIR -99 163 1 385 203 0 13 chr18 25892725 25892804 -60096130 + MER82 DNA MER2_type 449 526 -127 23 0 0 0 chr18 25893521 25893544 -60095390 + AT_rich Low_complexity Low_complexity 1 23 0 1489 234 150 7 chr18 25893626 25894066 -60094868 - MLT1D LTR MaLR -2 503 1 322 331 79 8 chr18 25894287 25894414 -60094520 + L2 LINE L2 2932 3067 -205 223 329 25 13 chr18 25894514 25894593 -60094341 + L2 LINE L2 3234 3313 0 647 223 16 72 chr18 25895133 25895326 -60093608 + AluJo SINE Alu 85 266 -46 21 57 0 0 chr18 25896423 25896458 -60092476 + AT_rich Low_complexity Low_complexity 1 35 0 5006 221 12 12 chr18 25896986 25898300 -60090634 - L1P LINE L1 -2193 3953 2640 5693 131 12 1 chr18 25898311 25899430 -60089504 + L1PA15 LINE L1 5035 6163 -2 450 350 145 0 chr18 25899588 25899802 -60089132 - MIR SINE MIR 0 262 18 2415 80 3 0 chr18 25901537 25901839 -60087095 - AluSc SINE Alu -6 303 1 6835 61 2 14 chr18 25902292 25902958 -60085976 - L1PA6 LINE L1 -4 6150 5478 2265 84 0 3 chr18 25902958 25903256 -60085678 - AluY SINE Alu -12 299 3 6835 61 2 14 chr18 25903256 25904207 -60084727 - L1PA6 LINE L1 -676 5478 4551 788 318 85 31 chr18 25906473 25907047 -60081887 - L2 LINE L2 -3 3310 2692 2608 48 0 0 chr18 25907047 25907356 -60081578 - AluY SINE Alu -2 309 1 788 318 85 31 chr18 25907356 25907487 -60081447 - L2 LINE L2 -621 2692 2569 248 355 0 19 chr18 25910292 25910399 -60078535 + MIR SINE MIR 3 107 -155 312 293 161 29 chr18 25910444 25910618 -60078316 + MIR SINE MIR 42 238 -24 276 240 155 39 chr18 25910681 25910810 -60078124 + MIR SINE MIR 87 230 -32 182 354 93 9 chr18 25911871 25912097 -60076837 - L2 LINE L2 -65 3248 3004 464 229 0 0 chr18 25912333 25912429 -60076505 - Zaphod DNA AcHobo 0 4031 3936 228 250 33 117 chr18 25913144 25913264 -60075670 + MER5A DNA MER1_type 80 189 0 1491 209 111 12 chr18 25913543 25913968 -60074966 + MLT1C LTR MaLR 1 467 0 2316 98 3 0 chr18 25915648 25915943 -60072991 + AluSc SINE Alu 1 296 -13 3226 179 29 5 chr18 25918008 25918684 -60070250 - L1MD3 LINE L1 -1 7994 5555 5208 80 3 1 chr18 25919472 25920232 -60068702 - L1PA7 LINE L1 -1063 5083 4323 6871 55 19 0 chr18 25920232 25921284 -60067650 + L1PA7 LINE L1 5086 6154 0 424 267 85 18 chr18 25921498 25921663 -60067271 + MIR SINE MIR 21 196 -66 656 204 9 0 chr18 25922281 25922419 -60066515 + FLAM_A SINE Alu 1 139 0 2070 171 85 15 chr18 25922530 25922999 -60065935 + MLT1D LTR MaLR 4 505 0 181 333 22 80 chr18 25923097 25923235 -60065699 - MIR SINE MIR -80 182 53 3186 124 4 0 chr18 25923276 25923758 -60065176 + L1PB2 LINE L1 5665 6148 -3 300 298 99 8 chr18 25925602 25925723 -60063211 - L2 LINE L2 -4 3268 3137 242 304 0 65 chr18 25926562 25926654 -60062280 - L2 LINE L2 0 3272 3187 264 288 98 23 chr18 25927207 25927339 -60061595 + L2 LINE L2 2526 2667 -647 535 305 128 39 chr18 25927362 25927821 -60061113 + L2 LINE L2 2805 3304 -9 24 0 0 0 chr18 25928869 25928893 -60060041 + AT_rich Low_complexity Low_complexity 1 24 0 2113 113 0 55 chr18 25928895 25929204 -60059730 + AluSg SINE Alu 2 293 -17 180 0 0 0 chr18 25929204 25929224 -60059710 + (T)n Simple_repeat Simple_repeat 1 20 0 224 258 15 0 chr18 25929333 25929399 -60059535 + (TA)n Simple_repeat Simple_repeat 2 68 0 196 167 19 111 chr18 25930151 25930205 -60058729 + MIR SINE MIR 97 145 -63 2188 127 3 0 chr18 25930757 25931065 -60057869 - AluSx SINE Alu 0 312 4 237 286 98 24 chr18 25931077 25931210 -60057724 + MIR SINE MIR 53 201 -7 5765 120 29 8 chr18 25931264 25932363 -60056571 + L1PA16 LINE L1 5042 6157 -9 227 356 140 25 chr18 25932395 25932631 -60056303 - L2 LINE L2 -206 3066 2804 978 48 79 0 chr18 25933456 25933582 -60055352 - MER85 DNA T2_type -3 136 1 556 225 33 0 chr18 25933593 25933713 -60055221 - AluSg/x SINE Alu -51 261 138 208 303 226 7 chr18 25933854 25934009 -60054925 - MIR SINE MIR -3 259 71 1282 167 134 30 chr18 25934315 25934584 -60054350 - AluJo SINE Alu -15 297 1 422 353 90 31 chr18 25934804 25935059 -60053875 - MER115 DNA AcHobo -260 433 164 243 175 0 0 chr18 25935470 25935510 -60053424 - MER113 DNA MER1_type? -28 493 454 217 216 0 0 chr18 25935638 25935675 -60053259 + (CA)n Simple_repeat Simple_repeat 2 38 0 1204 196 135 3 chr18 25936150 25936286 -60052648 - MLT1B LTR MaLR -38 352 235 297 0 0 0 chr18 25936286 25936319 -60052615 + (GA)n Simple_repeat Simple_repeat 1 33 0 1204 196 135 3 chr18 25936319 25936493 -60052441 - MLT1B LTR MaLR -155 235 1 370 301 51 13 chr18 25936569 25936725 -60052209 + MER5A DNA MER1_type 28 189 0 487 331 86 35 chr18 25937201 25937491 -60051443 - L2 LINE L2 0 3272 2968 530 289 88 10 chr18 25937835 25938039 -60050895 + MIR SINE MIR 11 230 -32 504 327 44 22 chr18 25938045 25938363 -60050571 - L2 LINE L2 -1319 1995 1671 805 217 6 19 chr18 25938428 25938588 -60050346 + Charlie1a DNA MER1_type 1 158 -1297 2120 185 31 15 chr18 25938588 25938978 -60049956 - MSTD LTR MaLR 0 396 1 * 4829 196 57 7 chr18 25938978 25940041 -60048893 + Charlie1a DNA MER1_type 151 1267 -188 1435 177 13 60 chr18 25940048 25940364 -60048570 + AluJo SINE Alu 11 311 -1 282 202 55 28 chr18 25940368 25940477 -60048457 + Charlie1a DNA MER1_type 1262 1373 -82 406 321 46 36 chr18 25940481 25940761 -60048173 - L2 LINE L2 -1704 1610 1328 21 36 0 0 chr18 25940934 25940962 -60047972 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr18 25942246 25942267 -60046667 + AT_rich Low_complexity Low_complexity 1 21 0 722 206 90 16 chr18 25942862 25943051 -60045883 + MLT1B LTR MaLR 188 390 0 450 311 49 64 chr18 25943176 25943244 -60045690 - L2 LINE L2 -564 2750 2683 1784 124 0 44 chr18 25943244 25943518 -60045416 + AluSx SINE Alu 31 292 -20 180 0 0 0 chr18 25943523 25943543 -60045391 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 450 311 49 64 chr18 25943543 25943812 -60045122 - L2 LINE L2 -635 2679 2412 744 286 24 5 chr18 25944072 25944278 -60044656 + MIR SINE MIR 2 211 -51 344 182 100 27 chr18 25944524 25944634 -60044300 + LTR67 LTR ERVL 435 552 -5 1510 197 23 10 chr18 25945164 25945468 -60043466 - AluJo SINE Alu -4 308 1 2572 160 24 7 chr18 25945801 25946219 -60042715 - MSTB1 LTR MaLR -3 429 5 227 204 19 0 chr18 25946397 25946451 -60042483 + (CAT)n Simple_repeat Simple_repeat 2 56 0 22 35 0 0 chr18 25947343 25947372 -60041562 + AT_rich Low_complexity Low_complexity 1 29 0 822 231 29 0 chr18 25950364 25950537 -60038397 + MER45A DNA AcHobo 1 178 0 727 266 33 0 chr18 25953197 25953441 -60035493 + L1ME1 LINE L1 2910 3161 -2985 * 2908 202 62 53 chr18 25953412 25953962 -60034972 + L1ME1 LINE L1 5185 5728 -442 1776 164 55 0 chr18 25953962 25954255 -60034679 + AluSx SINE Alu 1 309 -3 2908 202 62 53 chr18 25954255 25954543 -60034391 + L1ME1 LINE L1 5728 6006 -164 349 105 0 0 chr18 25954543 25954600 -60034334 + L1MA10 LINE L1 6277 6333 -1 2908 202 62 53 chr18 25954600 25954756 -60034178 + L1ME1 LINE L1 6006 6159 -11 1598 269 137 33 chr18 25955204 25955940 -60032994 - L2 LINE L2 -427 2887 2075 353 271 0 0 chr18 25955939 25956024 -60032910 + L2 LINE L2 3188 3272 0 * 1952 167 20 64 chr18 25957371 25957779 -60031155 - MLT1B LTR MaLR 0 390 1 311 244 70 12 chr18 25958054 25958140 -60030794 + MLT1F1 LTR MaLR 7 97 -496 1935 154 4 0 chr18 25958169 25958448 -60030486 - AluSx SINE Alu -32 280 1 571 263 205 15 chr18 25958448 25958707 -60030227 + MLT1F1 LTR MaLR 89 396 -171 1392 73 5 78 chr18 25958707 25958912 -60030022 + AluY SINE Alu 7 196 -115 230 133 0 22 chr18 26059347 26059392 -59929542 + (TTC)n Simple_repeat Simple_repeat 3 46 0 194 62 31 0 chr18 26062818 26062850 -59926084 + (GAAAA)n Simple_repeat Simple_repeat 2 34 0 794 215 102 30 chr18 26063864 26063906 -59925028 - L1MB8 LINE L1 -12 6166 6128 2039 116 0 19 chr18 26063906 26064044 -59924890 + AluSx SINE Alu 1 140 -172 2186 92 10 20 chr18 26064044 26064347 -59924587 + AluSg SINE Alu 1 300 -10 2039 116 0 19 chr18 26064347 26064518 -59924416 + AluSx SINE Alu 140 304 -8 794 215 102 30 chr18 26064518 26064740 -59924194 - L1MB8 LINE L1 -50 6128 5883 192 154 0 26 chr18 26064967 26065006 -59923928 + MIR SINE MIR 106 143 -65 193 318 71 0 chr18 26065708 26065793 -59923141 - L2 LINE L2 -370 2943 2853 296 391 75 6 chr18 26066399 26066573 -59922361 + MIR SINE MIR 56 241 -21 2181 112 3 0 chr18 26066889 26067185 -59921749 - AluSx SINE Alu -15 297 1 1862 147 14 0 chr18 26067205 26067490 -59921444 + AluSx SINE Alu 3 291 -21 253 351 30 15 chr18 26069903 26070034 -59918900 - MIR SINE MIR -51 211 79 699 230 0 0 chr18 26070060 26070195 -59918739 - AluJb SINE Alu -58 254 120 1556 130 61 0 chr18 26070312 26070559 -59918375 - AluSx SINE Alu -14 298 37 2025 136 23 0 chr18 26071705 26072006 -59916928 + AluJb SINE Alu 1 308 -4 252 196 0 0 chr18 26072069 26072115 -59916819 - AluJ/FLAM SINE Alu -228 74 29 328 286 64 7 chr18 26072666 26072806 -59916128 - L1MB8 LINE L1 0 6178 6031 1345 166 4 8 chr18 26072811 26073052 -59915882 + AluJo SINE Alu 21 260 -52 1478 157 12 12 chr18 26073069 26073318 -59915616 - AluJb SINE Alu -20 292 44 2345 64 27 0 chr18 26073318 26073612 -59915322 - AluSg SINE Alu -7 303 1 288 218 0 0 chr18 26073612 26073667 -59915267 - AluJb SINE Alu -245 55 1 1039 232 40 14 chr18 26073691 26073988 -59914946 - L1MB7 LINE L1 -145 6039 5735 353 203 23 53 chr18 26075502 26075635 -59913299 + (CTGGGG)n Simple_repeat Simple_repeat 5 133 0 453 248 0 0 chr18 26076072 26076233 -59912701 + (TG)n Simple_repeat Simple_repeat 1 161 0 2088 99 0 3 chr18 26077949 26078231 -59910703 + AluSx SINE Alu 1 281 -31 768 143 7 57 chr18 26078545 26078685 -59910249 + FLAM_C SINE Alu 1 133 0 210 336 39 29 chr18 26078997 26079101 -59909833 + MIR SINE MIR 110 214 -48 330 316 70 19 chr18 26079435 26079593 -59909341 + MIR SINE MIR 46 211 -51 1750 148 4 4 chr18 26080309 26080580 -59908354 + AluJb SINE Alu 21 291 -21 1775 145 44 14 chr18 26080611 26080907 -59908027 + AluJb SINE Alu 1 305 -7 2502 56 0 0 chr18 26080927 26081229 -59907705 + AluY SINE Alu 1 302 -9 745 288 107 44 chr18 26081668 26082143 -59906791 - L1ME3A LINE L1 -1 6169 5665 3184 215 111 19 chr18 26082144 26082502 -59906432 - L1ME3A LINE L1 -1059 5087 4763 2164 95 10 14 chr18 26082502 26082797 -59906137 + AluSq SINE Alu 5 298 -15 3184 215 111 19 chr18 26082797 26083479 -59905455 - L1ME3A LINE L1 -1383 4763 3952 1540 178 47 3 chr18 26083597 26083895 -59905039 + MER7A DNA MER2_type 24 332 -14 337 219 89 32 chr18 26083992 26084115 -59904819 - L2 LINE L2 -7 3306 3177 252 130 0 0 chr18 26084555 26084601 -59904333 + (GGA)n Simple_repeat Simple_repeat 2 47 0 378 290 232 0 chr18 26088785 26088992 -59899942 - L2 LINE L2 -239 3074 2820 1034 259 78 39 chr18 26090130 26090566 -59898368 - MLT1C LTR MaLR 0 467 15 305 313 52 22 chr18 26090674 26090808 -59898126 + MIR3 SINE MIR 61 198 -10 743 75 25 0 chr18 26091390 26091949 -59896985 - MSR1 Satellite Satellite 0 572 1 270 229 0 0 chr18 26092788 26092858 -59896076 + (TG)n Simple_repeat Simple_repeat 1 70 0 2761 181 28 0 chr18 26093338 26093797 -59895137 - MER70A LTR ERVL 0 472 1 2061 111 3 7 chr18 26094048 26094336 -59894598 + AluSx SINE Alu 6 292 -20 2096 106 14 0 chr18 26094337 26094621 -59894313 + AluSg SINE Alu 1 288 -22 1911 82 111 11 chr18 26094622 26094902 -59894032 + AluSp SINE Alu 1 308 -5 1844 259 67 28 chr18 26094902 26095695 -59893239 - L1ME3 LINE L1 -120 6042 5227 2282 68 54 0 chr18 26096719 26097014 -59891920 + AluY SINE Alu 1 311 0 1870 124 0 0 chr18 26097018 26097283 -59891651 + AluSx SINE Alu 33 297 -15 669 160 0 24 chr18 26097347 26097472 -59891462 + MLT1B LTR MaLR 1 122 -268 482 214 0 11 chr18 26097472 26097561 -59891373 + AluJb SINE Alu 35 122 -190 2027 110 0 13 chr18 26097579 26097716 -59891218 + AluSx SINE Alu 1 138 -174 2268 84 7 7 chr18 26097716 26098015 -59890919 + AluSq SINE Alu 1 299 -14 2027 110 0 13 chr18 26098015 26098178 -59890756 + AluSx SINE Alu 138 297 -15 362 221 21 53 chr18 26098179 26098274 -59890660 - L1MC4 LINE L1 -1339 6703 6612 986 85 18 22 chr18 26098274 26098499 -59890435 + (TA)n Simple_repeat Simple_repeat 1 224 0 1124 133 0 0 chr18 26098502 26098667 -59890267 + AluJb SINE Alu 136 300 -12 1337 139 76 8 chr18 26098671 26098922 -59890012 + MLT1B LTR MaLR 123 390 0 2087 81 3 14 chr18 26098997 26099322 -59889612 - AluSx SINE Alu 0 322 1 1646 114 118 8 chr18 26100318 26100581 -59888353 + AluSg SINE Alu 4 295 -15 382 276 52 52 chr18 26100887 26101097 -59887837 - L2 LINE L2 -235 3037 2828 246 32 0 0 chr18 26101133 26101164 -59887770 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 433 304 38 53 chr18 26101367 26101476 -59887458 - ERVL LTR ERVL -3178 2586 2477 2208 59 42 0 chr18 26101476 26101764 -59887170 - AluY SINE Alu -11 300 1 433 304 38 53 chr18 26101764 26101917 -59887017 - ERVL LTR ERVL -3287 2477 2328 945 144 83 0 chr18 26101946 26102126 -59886808 + MSTA LTR MaLR 4 198 -230 641 128 0 18 chr18 26102127 26102384 -59886550 + AluSx SINE Alu 1 306 -4 1502 110 8 12 chr18 26102384 26102630 -59886304 + MSTA LTR MaLR 184 428 0 845 323 72 13 chr18 26102641 26103115 -59885819 - ERVL LTR ERVL -3488 2276 1775 1986 85 4 32 chr18 26103231 26103366 -59885568 + AluSx SINE Alu 1 128 -184 2149 99 0 3 chr18 26103366 26103681 -59885253 + AluY SINE Alu 1 314 0 1986 85 4 32 chr18 26103681 26103823 -59885111 + AluSx SINE Alu 128 273 -39 212 0 36 0 chr18 26103838 26103866 -59885068 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 476 241 53 8 chr18 26103992 26104125 -59884809 + LTR16A1 LTR ERVL 307 445 -12 404 214 0 0 chr18 26104348 26104437 -59884497 - MLT1F LTR MaLR -131 411 323 2075 100 16 22 chr18 26104538 26104849 -59884085 - AluSx SINE Alu -3 309 1 203 239 45 0 chr18 26104975 26105042 -59883892 + GA-rich Low_complexity Low_complexity 1 70 0 902 141 0 0 chr18 26105065 26105193 -59883741 + FLAM_C SINE Alu 2 129 -4 213 235 15 59 chr18 26105300 26105368 -59883566 - MIR SINE MIR -55 153 89 1905 156 0 7 chr18 26105382 26105689 -59883245 - AluJo SINE Alu -7 305 1 2236 106 3 0 chr18 26105695 26106006 -59882928 - AluSx SINE Alu 0 312 1 1523 155 7 43 chr18 26106007 26106284 -59882650 - AluJb SINE Alu -16 296 30 532 284 78 20 chr18 26106452 26106656 -59882278 - MIR SINE MIR -4 258 43 212 348 48 48 chr18 26106665 26106872 -59882062 - L2 LINE L2 -210 3062 2856 277 215 78 13 chr18 26107435 26107526 -59881408 - MSR1 Satellite Satellite 0 96 1 739 70 7 0 chr18 26107741 26108662 -59880272 + MSR1 Satellite Satellite 1 927 -20 322 205 0 0 chr18 26109606 26109684 -59879250 - MER33 DNA MER1_type -12 312 235 1214 155 20 0 chr18 26109687 26109887 -59879047 + AluJb SINE Alu 109 312 0 2261 102 0 0 chr18 26109952 26110247 -59878687 - AluSx SINE Alu -16 296 2 583 260 15 15 chr18 26110295 26110499 -59878435 - MER33 DNA MER1_type -120 204 1 545 257 58 44 chr18 26111291 26111497 -59877437 - MER3 DNA MER1_type 0 209 1 205 281 31 0 chr18 26111508 26111572 -59877362 + MER5A DNA MER1_type 4 69 -120 186 277 21 0 chr18 26111611 26111658 -59877276 + MER5A DNA MER1_type 62 109 -80 1935 115 52 0 chr18 26111794 26112082 -59876852 + AluSx SINE Alu 1 303 -9 350 205 0 0 chr18 26112508 26112591 -59876343 - MER33 DNA MER1_type -7 317 235 1003 185 25 10 chr18 26112594 26112794 -59876140 + AluJb SINE Alu 109 311 -1 2444 57 3 0 chr18 26112854 26113153 -59875781 - AluY SINE Alu -11 300 1 2108 111 17 0 chr18 26113154 26113442 -59875492 - AluSx SINE Alu -18 294 2 383 316 20 40 chr18 26113442 26113594 -59875340 + L1MCa LINE L1 1920 2068 -4358 558 215 6 44 chr18 26113612 26113770 -59875164 - MER33 DNA MER1_type -172 152 1 480 157 148 0 chr18 26114584 26114692 -59874242 - MER3 DNA MER1_type 0 209 86 1697 178 14 0 chr18 26114797 26115084 -59873850 - AluJo SINE Alu -4 308 18 406 227 72 0 chr18 26115121 26115218 -59873716 - MLT1A1 LTR MaLR -211 154 51 2483 48 3 6 chr18 26115227 26115538 -59873396 - AluY SINE Alu 0 311 2 225 244 0 0 chr18 26116193 26116234 -59872700 + polypyrimidine Low_complexity Low_complexity 2 42 0 323 345 80 28 chr18 26116234 26116483 -59872451 - L1M4c LINE L1 -5174 1210 949 313 113 0 32 chr18 26116501 26116563 -59872371 + (TTTC)n Simple_repeat Simple_repeat 2 61 0 1907 172 13 0 chr18 26116565 26116873 -59872061 - AluSx SINE Alu 0 312 1 1694 188 7 7 chr18 26116873 26117177 -59871757 - AluJo SINE Alu -8 304 1 1840 157 3 13 chr18 26117969 26118269 -59870665 - AluJo SINE Alu -15 297 1 2270 94 0 0 chr18 26119791 26120089 -59868845 - AluSq SINE Alu -10 303 6 946 232 28 69 chr18 26120093 26120333 -59868601 - L1MB8 LINE L1 -39 6139 5891 1908 138 10 3 chr18 26120333 26120623 -59868311 + AluJo SINE Alu 5 296 -16 946 232 28 69 chr18 26120623 26120676 -59868258 - L1MB8 LINE L1 -287 5891 5837 1820 145 19 19 chr18 26120676 26120848 -59868086 - AluSx SINE Alu -2 310 136 2301 107 0 0 chr18 26120848 26121157 -59867777 - AluSq SINE Alu -4 309 1 1820 145 19 19 chr18 26121157 26121294 -59867640 - AluSx SINE Alu -175 137 1 946 232 28 69 chr18 26121294 26121550 -59867384 - L1MB8 LINE L1 -341 5837 5530 2343 86 0 3 chr18 26122050 26122363 -59866571 + AluSp SINE Alu 1 312 -1 980 221 5 5 chr18 26122498 26122711 -59866223 - MER20 DNA MER1_type -5 214 2 997 145 20 0 chr18 26122741 26122923 -59866011 - AluJb SINE Alu 0 311 127 2016 154 3 0 chr18 26122942 26123253 -59865681 - AluSx SINE Alu 0 312 1 1576 124 86 176 chr18 26123298 26123349 -59865585 - Tigger2a DNA MER2_type -2275 433 379 2177 91 0 13 chr18 26123349 26123657 -59865277 + AluY SINE Alu 1 304 -7 1576 124 86 176 chr18 26123657 26123806 -59865128 - Tigger2a DNA MER2_type -2329 379 218 2132 89 0 0 chr18 26123806 26124087 -59864847 - AluY SINE Alu -30 281 1 1576 124 86 176 chr18 26124087 26124361 -59864573 - Tigger2a DNA MER2_type -2490 218 1 505 260 40 51 chr18 26124925 26125067 -59863867 - L2 LINE L2 0 3313 3172 2226 106 0 10 chr18 26125067 26125379 -59863555 + AluY SINE Alu 2 310 -1 505 260 40 51 chr18 26125379 26125413 -59863521 - L2 LINE L2 -141 3172 3139 1113 110 7 0 chr18 26125414 26125568 -59863366 + AluSg/x SINE Alu 135 289 -21 366 274 79 53 chr18 26125573 26125820 -59863114 + L1MCa LINE L1 1906 2118 -4308 2249 94 0 3 chr18 26125820 26126119 -59862815 - AluSg SINE Alu -12 298 1 366 274 79 53 chr18 26126119 26126131 -59862803 + L1MCa LINE L1 2118 2128 -4298 234 0 0 0 chr18 26126177 26126203 -59862731 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 1788 143 0 43 chr18 26126208 26126508 -59862426 - AluJo SINE Alu -24 288 2 555 321 57 36 chr18 26126514 26126882 -59862052 - L2 LINE L2 -243 3070 2695 2185 123 0 0 chr18 26126922 26127230 -59861704 + AluSx SINE Alu 1 308 -4 423 393 64 11 chr18 26127231 26127608 -59861326 - L2 LINE L2 -1106 2208 1812 2288 82 0 0 chr18 26127653 26127977 -59860957 - AluSx SINE Alu 0 324 1 2652 35 0 0 chr18 26128833 26129144 -59859790 - AluY SINE Alu 0 311 1 2082 116 7 0 chr18 26129151 26129445 -59859489 - AluSx SINE Alu -16 296 1 215 387 6 18 chr18 26130803 26130914 -59858020 + GA-rich Low_complexity Low_complexity 2 112 -55 1995 120 43 3 chr18 26130914 26131214 -59857720 + AluSq SINE Alu 1 312 -1 215 387 6 18 chr18 26131214 26131270 -59857664 + GA-rich Low_complexity Low_complexity 112 167 0 2162 93 0 0 chr18 26131367 26131701 -59857233 - AluSg SINE Alu 0 334 1 2308 89 3 0 chr18 26131877 26132204 -59856730 - AluSp SINE Alu 0 329 2 652 251 50 5 chr18 26132273 26132472 -59856462 + L1MB5 LINE L1 5930 6137 -37 2063 122 0 0 chr18 26132472 26132766 -59856168 - AluSx SINE Alu -18 294 1 180 0 0 0 chr18 26132777 26132797 -59856137 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2024 93 0 34 chr18 26132803 26133094 -59855840 - AluY SINE Alu -30 281 1 1868 166 0 3 chr18 26133114 26133410 -59855524 + AluJb SINE Alu 3 297 -15 652 266 64 5 chr18 26133460 26133648 -59855286 + MIR SINE MIR 44 242 -20 210 37 0 0 chr18 26133657 26133684 -59855250 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1916 100 11 0 chr18 26133689 26133950 -59854984 - AluSq SINE Alu -35 278 15 1654 151 74 0 chr18 26135246 26135531 -59853403 - AluJo SINE Alu 0 312 7 190 193 35 0 chr18 26135883 26135940 -59852994 + (CA)n Simple_repeat Simple_repeat 1 59 0 279 0 0 0 chr18 26137423 26137454 -59851480 + (A)n Simple_repeat Simple_repeat 1 31 0 227 321 67 22 chr18 26137462 26137596 -59851338 - MIR3 SINE MIR -8 200 61 183 329 29 0 chr18 26137555 26137625 -59851309 - L2 LINE L2 -3043 271 200 * 330 401 25 6 chr18 26138136 26138298 -59850636 - L2 LINE L2 -35 3237 3073 1727 117 68 0 chr18 26138353 26138641 -59850293 + AluSx SINE Alu 1 306 0 339 296 96 0 chr18 26138750 26138865 -59850069 - L2 LINE L2 -217 3055 2930 320 294 0 11 chr18 26139229 26139321 -59849613 + MIR SINE MIR 33 123 -85 399 304 53 23 chr18 26139444 26139615 -59849319 + MER5A DNA MER1_type 14 189 0 21 0 0 0 chr18 26142597 26142618 -59846316 + GC_rich Low_complexity Low_complexity 1 21 0 326 195 26 24 chr18 26143281 26143364 -59845570 + MIR SINE MIR 101 183 -58 2493 58 0 3 chr18 26143673 26144069 -59844865 - AluY SINE Alu 0 395 1 914 119 0 0 chr18 26144097 26144231 -59844703 - AluSp/q SINE Alu 0 313 180 1421 170 118 4 chr18 26144231 26144398 -59844536 - AluJo SINE Alu -1 301 155 216 0 0 0 chr18 26144398 26144422 -59844512 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1421 170 118 4 chr18 26144422 26144524 -59844410 - AluJo SINE Alu -147 155 1 417 20 0 0 chr18 26144852 26144902 -59844032 + (TG)n Simple_repeat Simple_repeat 1 50 0 297 298 0 81 chr18 26144961 26145046 -59843888 - MIR SINE MIR -76 186 96 2180 104 0 0 chr18 26145046 26145334 -59843600 + AluSq SINE Alu 1 288 -25 207 0 0 0 chr18 26145334 26145357 -59843577 + (GA)n Simple_repeat Simple_repeat 2 24 0 297 298 0 81 chr18 26145357 26145394 -59843540 - MIR SINE MIR -164 98 73 280 347 0 0 chr18 26145541 26145639 -59843295 - L2 LINE L2 -246 3067 2970 1365 222 69 6 chr18 26145641 26146001 -59842933 + L1MB5 LINE L1 5791 6173 -1 956 206 161 4 chr18 26146009 26146274 -59842660 + AluJo SINE Alu 1 303 0 2184 103 3 0 chr18 26146275 26146575 -59842359 + AluSp SINE Alu 1 301 -12 1135 196 5 9 chr18 26146575 26146799 -59842135 + AluJo SINE Alu 86 308 -4 354 299 212 4 chr18 26146802 26147043 -59841891 - L2 LINE L2 -337 2977 2687 974 106 0 0 chr18 26147043 26147175 -59841759 + AluSx SINE Alu 1 132 -181 2245 97 3 3 chr18 26147185 26147493 -59841441 + AluSx SINE Alu 1 308 -4 2080 77 4 0 chr18 26147495 26147767 -59841167 + AluSp SINE Alu 2 274 -39 306 0 0 0 chr18 26147767 26147801 -59841133 + (TC)n Simple_repeat Simple_repeat 2 35 0 282 56 0 0 chr18 26147801 26147837 -59841097 + (TA)n Simple_repeat Simple_repeat 2 37 0 325 292 62 0 chr18 26147860 26147956 -59840978 - L1MC4 LINE L1 -1333 6709 6608 1259 103 6 0 chr18 26147961 26148135 -59840799 + AluSx SINE Alu 118 292 -18 254 331 66 25 chr18 26148394 26148515 -59840419 - MIR SINE MIR -58 150 25 2113 105 3 10 chr18 26148558 26148862 -59840072 - AluSx SINE Alu -10 302 1 658 164 0 0 chr18 26148933 26149037 -59839897 - U13 snRNA snRNA 0 104 1 247 277 59 40 chr18 26150381 26150482 -59838452 - MSR1 Satellite Satellite 0 111 9 627 53 0 0 chr18 26150938 26151013 -59837921 + AluSp/q SINE Alu 205 279 -34 1238 90 0 6 chr18 26151013 26151190 -59837744 + AluY SINE Alu 136 311 0 210 330 44 11 chr18 26151293 26151384 -59837550 + MIR SINE MIR 99 192 -70 2247 100 7 3 chr18 26151385 26151695 -59837239 + AluSq SINE Alu 1 311 -2 1852 148 0 3 chr18 26151699 26152009 -59836925 - AluSx SINE Alu 0 309 1 1552 146 155 6 chr18 26152011 26152334 -59836600 - MSTA LTR MaLR -57 371 1 501 135 42 0 chr18 26152521 26152617 -59836317 + MER2 DNA MER2_type 1 100 -245 875 135 8 0 chr18 26152617 26152750 -59836184 + AluJo SINE Alu 2 135 -177 1279 159 30 142 chr18 26152750 26152901 -59836033 + AluYb8 SINE Alu 1 95 -223 2625 36 3 0 chr18 26152901 26153210 -59835724 + AluY SINE Alu 2 311 0 1279 159 30 142 chr18 26153210 26153397 -59835537 + AluYb8 SINE Alu 95 301 -17 421 198 0 0 chr18 26153398 26153484 -59835450 + MER2 DNA MER2_type 96 181 -164 1174 103 6 0 chr18 26153602 26153767 -59835167 - AluSg/x SINE Alu -10 300 135 259 291 24 78 chr18 26154175 26154316 -59834618 + MIR SINE MIR 50 152 -56 594 103 28 0 chr18 26154580 26154739 -59834195 - MSR1 Satellite Satellite 0 163 1 206 214 0 0 chr18 26155149 26155191 -59833743 + G-rich Low_complexity Low_complexity 5 46 0 210 215 0 62 chr18 26155928 26155993 -59832941 + MIR SINE MIR 85 145 -63 655 131 7 25 chr18 26156337 26156524 -59832410 + MSR1 Satellite Satellite 1 183 -8 661 115 49 22 chr18 26157748 26158357 -59830577 - MSR1 Satellite Satellite -1 625 1 626 62 19 16 chr18 26160211 26160647 -59828287 + MSR1 Satellite Satellite 1 437 -24 215 261 163 0 chr18 26160912 26161004 -59827930 - L2 LINE L2 -251 3021 2915 905 102 0 138 chr18 26161759 26161955 -59826979 - AluSc SINE Alu 0 309 141 872 178 55 0 chr18 26161987 26162150 -59826784 + FRAM SINE Alu 1 166 -10 1556 136 59 12 chr18 26162154 26162291 -59826643 - Tigger7 DNA MER2_type -44 2543 2414 1747 184 0 19 chr18 26162291 26162427 -59826507 + AluJb SINE Alu 1 138 -174 1937 126 0 0 chr18 26162427 26162729 -59826205 + AluSg SINE Alu 3 304 0 1747 184 0 19 chr18 26162729 26162907 -59826027 + AluJb SINE Alu 138 310 -2 1556 136 59 12 chr18 26162907 26163093 -59825841 - Tigger7 DNA MER2_type -173 2414 2205 655 152 0 0 chr18 26163090 26163202 -59825732 - Tigger7 DNA MER2_type -2374 113 2 * 224 298 0 48 chr18 26163209 26163393 -59825541 + GA-rich Low_complexity Low_complexity 1 175 0 3072 193 31 36 chr18 26163888 26164147 -59824787 - MER49 LTR ERV1 -5 918 659 2326 75 0 0 chr18 26164147 26164442 -59824492 - AluSg SINE Alu -15 295 1 3072 193 31 36 chr18 26164442 26164925 -59824009 - MER49 LTR ERV1 -264 659 180 228 188 16 16 chr18 26164972 26165090 -59823844 + (CAGA)n Simple_repeat Simple_repeat 1 118 0 207 247 22 82 chr18 26165230 26165412 -59823522 + (CAGAGA)n Simple_repeat Simple_repeat 2 172 0 447 132 0 15 chr18 26165924 26165992 -59822942 - AluS SINE Alu -240 69 3 2024 93 0 34 chr18 26166013 26166304 -59822630 + AluY SINE Alu 1 281 -30 180 0 0 0 chr18 26166310 26166330 -59822604 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2063 122 0 0 chr18 26166341 26166635 -59822299 + AluSx SINE Alu 1 294 -18 652 251 50 5 chr18 26166635 26166834 -59822100 - L1MB5 LINE L1 -37 6137 5930 2309 89 3 0 chr18 26166903 26167230 -59821704 + AluSp SINE Alu 2 329 0 2163 93 0 0 chr18 26167406 26167740 -59821194 + AluSg SINE Alu 1 334 0 215 387 6 18 chr18 26167837 26167893 -59821041 + CT-rich Low_complexity Low_complexity 2 57 -110 1995 120 43 3 chr18 26167893 26168193 -59820741 - AluSq SINE Alu -1 312 1 215 387 6 18 chr18 26168193 26168304 -59820630 + CT-rich Low_complexity Low_complexity 57 167 0 1891 161 0 3 chr18 26169662 26169960 -59818974 + AluJb SINE Alu 1 297 -15 652 266 64 5 chr18 26170010 26170198 -59818736 + MIR SINE MIR 44 242 -20 210 37 0 0 chr18 26170207 26170234 -59818700 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1916 100 11 0 chr18 26170239 26170500 -59818434 - AluSq SINE Alu -35 278 15 1654 151 74 0 chr18 26171796 26172081 -59816853 - AluJo SINE Alu 0 312 7 190 193 35 0 chr18 26172433 26172490 -59816444 + (CA)n Simple_repeat Simple_repeat 1 59 0 279 0 0 0 chr18 26173973 26174004 -59814930 + (A)n Simple_repeat Simple_repeat 1 31 0 227 321 67 22 chr18 26174012 26174146 -59814788 - MIR3 SINE MIR -8 200 61 183 329 29 0 chr18 26174105 26174175 -59814759 - L2 LINE L2 -3043 271 200 * 330 401 25 6 chr18 26174686 26174848 -59814086 - L2 LINE L2 -35 3237 3073 1727 117 68 0 chr18 26174903 26175191 -59813743 + AluSx SINE Alu 1 306 0 339 296 96 0 chr18 26175300 26175415 -59813519 - L2 LINE L2 -217 3055 2930 320 294 0 11 chr18 26175779 26175871 -59813063 + MIR SINE MIR 33 123 -85 399 304 53 23 chr18 26175994 26176165 -59812769 + MER5A DNA MER1_type 14 189 0 21 0 0 0 chr18 26179147 26179168 -59809766 + GC_rich Low_complexity Low_complexity 1 21 0 326 195 26 24 chr18 26179831 26179914 -59809020 + MIR SINE MIR 101 183 -58 2493 58 0 3 chr18 26180223 26180619 -59808315 - AluY SINE Alu 0 395 1 914 119 0 0 chr18 26180647 26180781 -59808153 - AluSp/q SINE Alu 0 313 180 1421 170 118 4 chr18 26180781 26180948 -59807986 - AluJo SINE Alu -1 301 155 216 0 0 0 chr18 26180948 26180972 -59807962 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1421 170 118 4 chr18 26180972 26181074 -59807860 - AluJo SINE Alu -147 155 1 417 20 0 0 chr18 26181402 26181452 -59807482 + (TG)n Simple_repeat Simple_repeat 1 50 0 297 298 0 81 chr18 26181511 26181596 -59807338 - MIR SINE MIR -76 186 96 2180 104 0 0 chr18 26181596 26181884 -59807050 + AluSq SINE Alu 1 288 -25 207 0 0 0 chr18 26181884 26181907 -59807027 + (GA)n Simple_repeat Simple_repeat 2 24 0 297 298 0 81 chr18 26181907 26181944 -59806990 - MIR SINE MIR -164 98 73 280 347 0 0 chr18 26182091 26182189 -59806745 - L2 LINE L2 -246 3067 2970 1365 222 69 6 chr18 26182191 26182551 -59806383 + L1MB5 LINE L1 5791 6173 -1 956 206 161 4 chr18 26182559 26182824 -59806110 + AluJo SINE Alu 1 303 0 2184 103 3 0 chr18 26182825 26183125 -59805809 + AluSp SINE Alu 1 301 -12 1135 196 5 9 chr18 26183125 26183349 -59805585 + AluJo SINE Alu 86 308 -4 354 299 212 4 chr18 26183352 26183593 -59805341 - L2 LINE L2 -337 2977 2687 974 106 0 0 chr18 26183593 26183725 -59805209 + AluSx SINE Alu 1 132 -181 2245 97 3 3 chr18 26183735 26184043 -59804891 + AluSx SINE Alu 1 308 -4 2080 77 4 0 chr18 26184045 26184317 -59804617 + AluSp SINE Alu 2 274 -39 306 0 0 0 chr18 26184317 26184351 -59804583 + (TC)n Simple_repeat Simple_repeat 2 35 0 282 56 0 0 chr18 26184351 26184387 -59804547 + (TA)n Simple_repeat Simple_repeat 2 37 0 325 292 62 0 chr18 26184410 26184506 -59804428 - L1MC4 LINE L1 -1333 6709 6608 1259 103 6 0 chr18 26184511 26184685 -59804249 + AluSx SINE Alu 120 294 -18 254 331 66 25 chr18 26184944 26185065 -59803869 - MIR SINE MIR -58 150 25 2113 105 3 10 chr18 26185108 26185412 -59803522 - AluSx SINE Alu -10 302 1 658 164 0 0 chr18 26185483 26185587 -59803347 - U13 snRNA snRNA 0 104 1 247 277 59 40 chr18 26186931 26187032 -59801902 - MSR1 Satellite Satellite 0 111 9 627 53 0 0 chr18 26187488 26187563 -59801371 + AluSp/q SINE Alu 205 279 -34 1238 90 0 6 chr18 26187563 26187740 -59801194 + AluY SINE Alu 136 311 0 210 330 44 11 chr18 26187843 26187934 -59801000 + MIR SINE MIR 99 192 -70 2247 100 7 3 chr18 26187935 26188245 -59800689 + AluSq SINE Alu 1 311 -2 1852 148 0 3 chr18 26188249 26188559 -59800375 - AluSx SINE Alu 0 309 1 1552 146 155 6 chr18 26188561 26188884 -59800050 - MSTA LTR MaLR -57 371 1 501 135 42 0 chr18 26189071 26189167 -59799767 + MER2 DNA MER2_type 1 100 -245 875 135 8 0 chr18 26189167 26189300 -59799634 + AluJo SINE Alu 2 135 -177 1279 159 30 142 chr18 26189300 26189451 -59799483 + AluYb8 SINE Alu 1 95 -223 2625 36 3 0 chr18 26189451 26189760 -59799174 + AluY SINE Alu 2 311 0 1279 159 30 142 chr18 26189760 26189947 -59798987 + AluYb8 SINE Alu 95 301 -17 421 198 0 0 chr18 26189948 26190034 -59798900 + MER2 DNA MER2_type 96 181 -164 1174 103 6 0 chr18 26190152 26190317 -59798617 - AluSg/x SINE Alu -10 300 135 259 291 24 78 chr18 26190725 26190866 -59798068 + MIR SINE MIR 50 152 -56 594 103 28 0 chr18 26191130 26191289 -59797645 - MSR1 Satellite Satellite 0 163 1 470 151 8 34 chr18 26191754 26191873 -59797061 + CT-rich Low_complexity Low_complexity 3 118 0 1513 181 11 22 chr18 26191887 26192164 -59796770 - AluJo SINE Alu -38 274 1 261 332 104 11 chr18 26192181 26192530 -59796404 + L2 LINE L2 2575 2960 -312 1440 174 0 23 chr18 26192539 26192798 -59796136 + AluJo SINE Alu 50 302 -10 2162 108 3 7 chr18 26192806 26193103 -59795831 + AluSq SINE Alu 1 296 -17 249 269 247 18 chr18 26193306 26193525 -59795409 - L2 LINE L2 -1005 2309 2041 860 107 0 101 chr18 26193875 26193987 -59794947 + AluJb SINE Alu 1 96 -216 2171 109 0 16 chr18 26193987 26194291 -59794643 - AluSx SINE Alu -11 301 3 860 107 0 101 chr18 26194291 26194327 -59794607 + AluJb SINE Alu 96 134 -178 2177 106 0 10 chr18 26194327 26194628 -59794306 + AluSx SINE Alu 1 298 -14 504 245 163 49 chr18 26194628 26194755 -59794179 - MER33 DNA MER1_type -2311 274 163 2350 60 0 16 chr18 26194755 26195070 -59793864 + AluY SINE Alu 2 311 0 504 245 163 49 chr18 26195070 26195187 -59793747 - MER33 DNA MER1_type -2422 163 2 205 259 0 19 chr18 26195341 26195395 -59793539 - MER91 DNA MER1_type 0 196 144 1992 73 84 0 chr18 26195395 26195669 -59793265 + AluSq SINE Alu 1 297 -16 2142 95 0 3 chr18 26196350 26196678 -59792256 - AluSc SINE Alu 0 327 1 1574 192 3 35 chr18 26196680 26196997 -59791937 - AluJo SINE Alu -5 307 1 2169 87 13 13 chr18 26197023 26197334 -59791600 - AluSx SINE Alu -1 311 1 745 168 0 0 chr18 26197353 26197478 -59791456 - FLAM_A SINE Alu -5 137 13 1504 209 104 8 chr18 26197493 26197876 -59791058 + MLT1D LTR MaLR 82 501 -4 2049 124 0 17 chr18 26197881 26198179 -59790755 + AluSx SINE Alu 6 298 -14 204 248 8 116 chr18 26198573 26198598 -59790336 - MIR SINE MIR -77 131 105 2337 81 0 0 chr18 26198598 26198895 -59790039 + AluSx SINE Alu 1 297 -15 204 248 8 116 chr18 26198895 26198998 -59789936 - MIR SINE MIR -103 105 17 649 86 27 8 chr18 26199230 26199845 -59789089 - MSR1 Satellite Satellite -5 626 1 312 187 107 0 chr18 26200168 26200243 -59788691 + MIR SINE MIR 59 141 -67 407 333 47 13 chr18 26200627 26200777 -59788157 + MIR SINE MIR 44 198 -64 873 146 0 0 chr18 26200789 26200919 -59788015 + FLAM_C SINE Alu 1 130 -13 931 194 6 0 chr18 26200948 26201118 -59787816 - MIR SINE MIR -87 175 5 545 282 40 0 chr18 26201119 26201293 -59787641 + MER63A DNA MER1_type 2 182 -28 2274 71 24 0 chr18 26201355 26201650 -59787284 + AluSq SINE Alu 1 302 -11 779 172 16 0 chr18 26201650 26201778 -59787156 + AluJb SINE Alu 180 309 -3 180 0 0 0 chr18 26201778 26201798 -59787136 + (GGAA)n Simple_repeat Simple_repeat 1 20 0 398 247 87 53 chr18 26201798 26202079 -59786855 - MLT1J LTR MaLR -102 409 100 251 358 51 15 chr18 26202161 26202298 -59786636 - MIR3 SINE MIR -52 156 15 347 246 22 36 chr18 26202520 26202658 -59786276 + (CAGAGA)n Simple_repeat Simple_repeat 3 138 0 679 83 11 6 chr18 26204257 26204577 -59784357 + MSR1 Satellite Satellite 1 321 0 635 96 17 0 chr18 26204631 26204914 -59784020 + MSR1 Satellite Satellite 1 287 0 305 313 52 22 chr18 26205496 26205630 -59783304 - MIR3 SINE MIR -10 198 61 1034 259 78 39 chr18 26205738 26206174 -59782760 + MLT1C LTR MaLR 15 467 0 378 290 232 0 chr18 26207312 26207519 -59781415 + L2 LINE L2 2820 3074 -239 252 130 0 0 chr18 26211701 26211747 -59777187 + (TCC)n Simple_repeat Simple_repeat 2 47 0 337 219 89 32 chr18 26212187 26212310 -59776624 + L2 LINE L2 3177 3306 -7 1540 178 47 3 chr18 26212407 26212705 -59776229 - MER7A DNA MER2_type -14 332 24 3184 215 111 19 chr18 26212823 26213505 -59775429 + L1ME3A LINE L1 3952 4763 -1383 2164 95 10 14 chr18 26213505 26213800 -59775134 - AluSq SINE Alu -15 298 5 3184 215 111 19 chr18 26213800 26214158 -59774776 + L1ME3A LINE L1 4763 5087 -1059 745 288 107 44 chr18 26214159 26214634 -59774300 + L1ME3A LINE L1 5665 6169 -1 2502 56 0 0 chr18 26215073 26215375 -59773559 - AluY SINE Alu -9 302 1 1775 145 44 14 chr18 26215395 26215691 -59773243 - AluJb SINE Alu -7 305 1 1750 148 4 4 chr18 26215722 26215993 -59772941 - AluJb SINE Alu -21 291 21 330 316 70 19 chr18 26216709 26216867 -59772067 - MIR SINE MIR -51 211 46 210 336 39 29 chr18 26217201 26217305 -59771629 - MIR SINE MIR -48 214 110 768 143 7 57 chr18 26217617 26217757 -59771177 - FLAM_C SINE Alu 0 133 1 2088 99 0 3 chr18 26218071 26218353 -59770581 - AluSx SINE Alu -31 281 1 453 248 0 0 chr18 26220069 26220230 -59768704 + (CA)n Simple_repeat Simple_repeat 1 161 0 353 203 23 53 chr18 26220667 26220800 -59768134 + (CCCCAG)n Simple_repeat Simple_repeat 5 133 0 1039 232 40 14 chr18 26222314 26222611 -59766323 + L1MB7 LINE L1 5735 6039 -145 288 218 0 0 chr18 26222635 26222690 -59766244 + AluJb SINE Alu 1 55 -247 2345 64 27 0 chr18 26222690 26222985 -59765949 + AluSg SINE Alu 1 303 -7 1478 157 12 12 chr18 26222985 26223233 -59765701 + AluJb SINE Alu 44 292 -20 1497 155 4 0 chr18 26223250 26223489 -59765445 - AluJo SINE Alu -52 260 21 328 286 64 7 chr18 26223494 26223634 -59765300 + L1MB8 LINE L1 6031 6178 0 252 196 0 0 chr18 26224185 26224231 -59764703 + AluJ/FLAM SINE Alu 29 74 -228 2025 136 23 0 chr18 26224294 26224595 -59764339 - AluJb SINE Alu -4 308 1 1556 130 61 0 chr18 26225742 26225989 -59762945 + AluSx SINE Alu 37 298 -14 699 230 0 0 chr18 26226106 26226241 -59762693 + AluJb SINE Alu 120 254 -58 253 351 30 15 chr18 26226267 26226398 -59762536 + MIR SINE MIR 79 211 -51 1862 147 14 0 chr18 26228811 26229096 -59759838 - AluSx SINE Alu -21 291 3 2181 112 3 0 chr18 26229116 26229412 -59759522 + AluSx SINE Alu 1 297 -15 296 391 75 6 chr18 26229728 26229902 -59759032 - MIR SINE MIR -21 241 56 193 318 71 0 chr18 26230508 26230593 -59758341 + L2 LINE L2 2853 2943 -370 192 154 0 26 chr18 26231295 26231334 -59757600 - MIR SINE MIR -65 143 106 794 215 102 30 chr18 26231561 26231783 -59757151 + L1MB8 LINE L1 5883 6128 -50 2039 116 0 19 chr18 26231783 26231954 -59756980 - AluSx SINE Alu -8 304 140 2186 92 10 20 chr18 26231954 26232257 -59756677 - AluSg SINE Alu -10 300 1 2039 116 0 19 chr18 26232257 26232395 -59756539 - AluSx SINE Alu -172 140 1 794 215 102 30 chr18 26232395 26232437 -59756497 + L1MB8 LINE L1 6128 6166 -12 1276 153 114 19 chr18 26232873 26233135 -59755799 - AluJb SINE Alu -12 300 14 193 241 35 0 chr18 26233276 26233334 -59755600 + MIR SINE MIR 78 137 -71 2439 77 0 0 chr18 26233843 26234153 -59754781 - AluSg SINE Alu 0 310 1 288 235 62 0 chr18 26234171 26234252 -59754682 + CT-rich Low_complexity Low_complexity 3 88 0 2539 202 42 34 chr18 26234844 26235024 -59753910 + L1MB7 LINE L1 5522 5699 -485 926 205 0 0 chr18 26235024 26235185 -59753749 - FRAM SINE Alu -1 165 5 2235 112 0 0 chr18 26235195 26235498 -59753436 - AluSx SINE Alu -9 303 1 2398 69 13 0 chr18 26235498 26235801 -59753133 - AluSx SINE Alu -4 308 1 2539 202 42 34 chr18 26235801 26236251 -59752683 + L1MB7 LINE L1 5706 6169 -15 414 152 0 0 chr18 26236264 26236330 -59752604 + AluJ/FLAM SINE Alu 1 66 -246 1521 141 43 69 chr18 26236368 26236650 -59752284 + AluSx SINE Alu 1 276 -26 480 35 0 0 chr18 26236650 26236708 -59752226 + (CA)n Simple_repeat Simple_repeat 1 58 0 1521 141 43 69 chr18 26236708 26236729 -59752205 + AluSx SINE Alu 276 296 -6 1949 216 14 6 chr18 26236878 26237240 -59751694 + MLT1A1 LTR MaLR 1 365 0 992 187 0 22 chr18 26237263 26237282 -59751652 - AluJb SINE Alu -1 311 293 2221 91 0 31 chr18 26237282 26237601 -59751333 - AluSc SINE Alu 0 309 1 992 187 0 22 chr18 26237601 26237763 -59751171 - AluJb SINE Alu -19 293 134 1388 196 196 21 chr18 26238018 26238401 -59750533 - LTR7 LTR ERV1 0 450 1 3198 117 14 14 chr18 26238401 26238958 -59749976 - HERVH LTR ERV1 0 7713 7157 1162 152 45 41 chr18 26238951 26239084 -59749850 - HERVH LTR ERV1 -1697 6016 5885 * 2453 61 0 0 chr18 26239084 26239381 -59749553 + AluY SINE Alu 1 297 -14 1162 152 45 41 chr18 26239381 26239516 -59749418 - HERVH LTR ERV1 -1828 5885 5747 6254 113 4 10 chr18 26239516 26241074 -59747860 - HERVH LTR ERV1 -1805 5286 3426 2406 69 0 25 chr18 26241074 26241393 -59747541 - AluY SINE Alu 0 311 1 6254 113 4 10 chr18 26241393 26241463 -59747471 - HERVH LTR ERV1 -3665 3426 3357 10316 123 16 28 chr18 26241463 26241692 -59747242 - HERVH LTR ERV1 -4883 2830 2600 2539 50 0 0 chr18 26241692 26241995 -59746939 - AluY SINE Alu -8 303 1 10316 123 16 28 chr18 26241995 26244327 -59744607 - HERVH LTR ERV1 -5113 2600 1 1308 199 132 55 chr18 26244327 26244745 -59744189 - LTR7 LTR ERV1 0 450 1 446 227 17 42 chr18 26244745 26244864 -59744070 - MLT1J LTR MaLR -394 117 2 494 192 14 145 chr18 26244962 26245003 -59743931 - MLT1H LTR MaLR 0 549 504 2060 134 0 19 chr18 26245003 26245317 -59743617 + AluSx SINE Alu 5 312 0 494 192 14 145 chr18 26245317 26245375 -59743559 - MLT1H LTR MaLR -45 504 440 2438 57 0 3 chr18 26245375 26245674 -59743260 + AluY SINE Alu 1 298 -13 494 192 14 145 chr18 26245674 26245787 -59743147 - MLT1H LTR MaLR -109 440 364 391 268 6 48 chr18 26245874 26246042 -59742892 - MLT1J LTR MaLR -1 510 350 2097 92 74 0 chr18 26246044 26246327 -59742607 + AluSg SINE Alu 1 304 -6 201 288 25 12 chr18 26246334 26246414 -59742520 + MIR SINE MIR 32 112 -150 293 111 0 56 chr18 26246841 26246925 -59742009 + AluSp/q SINE Alu 234 314 0 2199 82 11 0 chr18 26247220 26247531 -59741403 + AluSx SINE Alu 1 314 0 2370 68 3 0 chr18 26247859 26248168 -59740766 + AluSg SINE Alu 1 310 0 446 262 54 13 chr18 26249055 26249204 -59739730 - L2 LINE L2 0 3313 3159 1983 128 10 0 chr18 26249208 26249513 -59739421 + AluSc SINE Alu 1 308 -1 33 0 0 0 chr18 26249916 26249949 -59738985 + GC_rich Low_complexity Low_complexity 1 33 0 249 247 13 0 chr18 26250025 26250102 -59738832 + (CGG)n Simple_repeat Simple_repeat 1 78 0 30 77 0 0 chr18 26250218 26250283 -59738651 + GC_rich Low_complexity Low_complexity 1 65 0 251 339 113 8 chr18 26252185 26252309 -59736625 + MIR SINE MIR 47 183 -79 401 169 236 0 chr18 26252926 26253015 -59735919 - MER81 DNA DNA 0 114 5 626 134 28 0 chr18 26253231 26253633 -59735301 - MSR1 Satellite Satellite -6 413 1 342 113 0 0 chr18 26254320 26254382 -59734552 - MSR1 Satellite Satellite -1 110 49 276 206 59 0 chr18 26255201 26255269 -59733665 + MIR SINE MIR 110 181 -81 232 298 137 8 chr18 26255660 26255791 -59733143 + MIR SINE MIR 47 194 -68 301 256 12 0 chr18 26256102 26256188 -59732746 - L1MC4 LINE L1 0 8042 7956 1013 183 36 33 chr18 26256211 26256485 -59732449 - L1MB8 LINE L1 0 6178 5904 218 244 24 37 chr18 26256579 26256661 -59732273 + CT-rich Low_complexity Low_complexity 5 85 0 1979 114 11 0 chr18 26256666 26256946 -59731988 - AluSx SINE Alu -16 296 14 1404 178 77 11 chr18 26258152 26258439 -59730495 + AluJb SINE Alu 1 306 -6 1354 179 81 30 chr18 26258443 26258571 -59730363 + L1MB3 LINE L1 5683 5803 -380 1935 123 7 0 chr18 26258571 26258855 -59730079 + AluSp SINE Alu 28 313 0 1354 179 81 30 chr18 26258855 26259061 -59729873 + L1MB3 LINE L1 5803 6034 -149 918 154 0 0 chr18 26259067 26259203 -59729731 - AluJb SINE Alu -176 136 1 517 170 34 61 chr18 26259205 26259315 -59729619 + L1MB2 LINE L1 6022 6129 -42 2244 96 3 7 chr18 26259315 26259616 -59729318 + AluSx SINE Alu 1 300 -12 517 170 34 61 chr18 26259616 26259652 -59729282 + L1MB2 LINE L1 6129 6164 -7 3565 35 21 5 chr18 26259692 26260127 -59728807 - L1PA5 LINE L1 0 6154 5713 2142 107 0 0 chr18 26260138 26260418 -59728516 - AluSq SINE Alu -33 280 1 407 238 143 0 chr18 26260433 26260580 -59728354 - MLT1K LTR MaLR -64 524 357 273 294 171 5 chr18 26260646 26260833 -59728101 - MLT1K LTR MaLR -338 250 33 237 311 120 12 chr18 26261104 26261271 -59727663 + L1ME LINE L1 5538 5722 -448 554 273 23 6 chr18 26261336 26261508 -59727426 - MER58B DNA MER1_type 0 341 167 848 161 29 83 chr18 26261514 26261593 -59727341 + L1MB5 LINE L1 5933 6015 -159 1771 164 17 0 chr18 26261593 26261885 -59727049 - AluJo SINE Alu -15 297 1 848 161 29 83 chr18 26261885 26262047 -59726887 + L1MB5 LINE L1 6015 6161 -13 854 168 74 0 chr18 26262330 26262479 -59726455 + FRAM SINE Alu 1 159 -17 2090 110 0 0 chr18 26262480 26262752 -59726182 + AluSg SINE Alu 1 272 -38 1893 150 17 0 chr18 26262837 26263124 -59725810 - AluSx SINE Alu -15 297 6 316 350 73 19 chr18 26263130 26263336 -59725598 - L1MCa LINE L1 -4303 2123 1907 * 345 217 33 65 chr18 26263277 26263369 -59725565 + L1MC4 LINE L1 6614 6702 -1340 2059 103 0 45 chr18 26263370 26263681 -59725253 - AluSg SINE Alu -13 297 1 25 0 0 0 chr18 26263685 26263710 -59725224 + AT_rich Low_complexity Low_complexity 1 25 0 471 189 8 45 chr18 26264198 26264330 -59724604 - L1M4 LINE L1 -3105 3041 2915 1959 132 30 3 chr18 26264334 26264630 -59724304 - AluJb SINE Alu -8 304 1 426 296 108 31 chr18 26264630 26265018 -59723916 - L1M4 LINE L1 -3281 2865 2448 1884 164 7 0 chr18 26265019 26265318 -59723616 - AluSx SINE Alu -11 301 1 271 339 26 9 chr18 26265544 26265659 -59723275 - MLT1K LTR MaLR -175 413 297 289 313 140 6 chr18 26265693 26265872 -59723062 - MLT1K LTR MaLR -248 340 138 628 296 29 22 chr18 26265893 26266170 -59722764 - MLT1J LTR MaLR -194 317 39 2067 123 10 0 chr18 26266280 26266582 -59722352 - AluSx SINE Alu -7 305 1 2057 107 0 4 chr18 26266638 26266949 -59721985 + AluSg SINE Alu 1 310 0 419 273 74 0 chr18 26266991 26267112 -59721822 - L2 LINE L2 -4 3268 3139 756 210 66 0 chr18 26267112 26267293 -59721641 - MER20 DNA MER1_type -26 193 1 219 293 121 6 chr18 26267421 26267595 -59721339 - L2 LINE L2 -343 2971 2778 652 265 32 36 chr18 26267804 26268023 -59720911 - MER20 DNA MER1_type -1 218 1 186 43 0 0 chr18 26268900 26268923 -59720011 + (CCCCAG)n Simple_repeat Simple_repeat 2 24 0 550 316 48 9 chr18 26269168 26269396 -59719538 + MIR SINE MIR 5 241 -21 212 324 11 45 chr18 26270609 26270788 -59718146 + G-rich Low_complexity Low_complexity 4 176 0 245 282 176 0 chr18 26272658 26272743 -59716191 + L2 LINE L2 3173 3272 0 724 32 17 0 chr18 26273214 26274274 -59714660 - MSR1 Satellite Satellite 0 1078 1 405 282 16 53 chr18 26276932 26277010 -59711924 + Charlie8 DNA MER1_type 67 146 -195 2146 85 3 17 chr18 26277010 26277329 -59711605 + AluSx SINE Alu 1 312 0 405 282 16 53 chr18 26277329 26277438 -59711496 + Charlie8 DNA MER1_type 146 247 -94 688 291 80 66 chr18 26277557 26278184 -59710750 - L2 LINE L2 -148 3165 2510 305 316 92 23 chr18 26279165 26279383 -59709551 - L2 LINE L2 -203 3069 2837 186 103 0 0 chr18 26281108 26281137 -59707797 + (CTGGGG)n Simple_repeat Simple_repeat 3 31 0 343 198 42 52 chr18 26281910 26282006 -59706928 - MIR SINE MIR -94 168 74 2187 84 7 3 chr18 26282085 26282372 -59706562 + AluSc SINE Alu 1 288 -21 288 284 74 0 chr18 26282372 26282453 -59706481 - MIR SINE MIR -5 257 171 279 219 143 76 chr18 26282505 26282624 -59706310 - MIR3 SINE MIR -37 171 45 245 206 0 29 chr18 26283637 26283705 -59705229 + MSR1 Satellite Satellite 45 110 -1 216 265 29 15 chr18 26283713 26283781 -59705153 + (CCCCG)n Simple_repeat Simple_repeat 5 73 0 852 103 0 73 chr18 26284354 26284490 -59704444 + FLAM_C SINE Alu 1 126 -7 22 35 0 0 chr18 26285333 26285362 -59703572 + GC_rich Low_complexity Low_complexity 1 29 0 3322 25 0 0 chr18 26385621 26385985 -59602949 + L1PA2 LINE L1 5792 6155 0 414 0 0 0 chr18 26386205 26386251 -59602683 + (CA)n Simple_repeat Simple_repeat 2 47 0 371 273 45 15 chr18 26386657 26386789 -59602145 - MER5A DNA MER1_type 0 189 54 1971 5 0 9 chr18 26387235 26387454 -59601480 - AluYa5 SINE Alu -94 217 1 2469 142 19 10 chr18 26387455 26387870 -59601064 - L1MA5A LINE L1 -22 6275 5857 674 246 30 18 chr18 26387875 26388042 -59600892 - MER97c DNA MER1_type? -921 169 1 2402 92 7 0 chr18 26388172 26388476 -59600458 - AluSg SINE Alu -4 306 1 230 233 67 17 chr18 26388493 26388553 -59600381 + L3 LINE CR1 1379 1441 -136 201 302 0 0 chr18 26388791 26388834 -59600100 - L2 LINE L2 -13 3259 3217 312 116 0 0 chr18 26388876 26388919 -59600015 - L1MA5 LINE L1 -213 6087 6045 1360 142 5 9 chr18 26389004 26389216 -59599718 + THE1C LTR MaLR 1 211 -164 875 210 156 70 chr18 26389338 26389528 -59599406 + MER97c DNA MER1_type? 349 578 -512 2424 96 0 0 chr18 26389528 26389830 -59599104 - AluY SINE Alu -9 302 1 875 210 156 70 chr18 26389830 26389953 -59598981 + MER97c DNA MER1_type? 578 689 -401 345 260 0 0 chr18 26389958 26390031 -59598903 + MER97c DNA MER1_type? 992 1064 -26 22 35 0 0 chr18 26390132 26390161 -59598773 + AT_rich Low_complexity Low_complexity 1 29 0 4273 102 0 19 chr18 26390161 26390336 -59598598 - L1PB1 LINE L1 -12 6139 5962 2394 104 0 0 chr18 26390336 26390645 -59598289 - AluSq SINE Alu -4 309 1 4273 102 0 19 chr18 26390645 26391058 -59597876 - L1PB1 LINE L1 -189 5962 5562 3267 98 39 11 chr18 26391058 26391456 -59597478 + MLT2A2 LTR ERVL 1 414 -39 564 15 0 0 chr18 26391456 26391521 -59597413 + (TA)n Simple_repeat Simple_repeat 2 66 0 3267 98 39 11 chr18 26391521 26391563 -59597371 + MLT2A2 LTR ERVL 414 453 0 7999 101 3 2 chr18 26391563 26392642 -59596292 + HERVL-A2 LTR ERVL 1 1080 -4574 276 220 0 0 chr18 26394818 26394877 -59594057 - MLT1L LTR MaLR -361 254 196 994 192 33 0 chr18 26394946 26395128 -59593806 + MER5A DNA MER1_type 2 189 0 1872 192 113 5 chr18 26395766 26396198 -59592736 + MLT2B1 LTR ERVL 1 479 -41 219 216 26 0 chr18 26396199 26396315 -59592619 + (TA)n Simple_repeat Simple_repeat 1 119 0 501 145 0 0 chr18 26396315 26396391 -59592543 - MLT2B1 LTR ERVL -70 450 375 1458 173 77 0 chr18 26396412 26396712 -59592222 - MER46B DNA MER2_type -35 201 4 324 0 0 0 chr18 26396712 26396748 -59592186 + (TG)n Simple_repeat Simple_repeat 2 37 0 22 0 0 0 chr18 26396755 26396777 -59592157 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr18 26396882 26396903 -59592031 + AT_rich Low_complexity Low_complexity 1 21 0 2427 80 0 0 chr18 26397039 26397339 -59591595 + AluY SINE Alu 1 300 -11 1891 156 71 6 chr18 26397601 26397940 -59590994 + MLT1A1 LTR MaLR 5 365 0 304 330 112 29 chr18 26398343 26398549 -59590385 - L3b LINE CR1 -1 1582 1360 4274 184 47 31 chr18 26398569 26398998 -59589936 - L1MB7 LINE L1 0 6900 6479 2006 134 38 30 chr18 26398998 26399370 -59589564 + THE1C LTR MaLR 1 375 0 4274 184 47 31 chr18 26399370 26399659 -59589275 - L1MB7 LINE L1 -421 6479 6196 1692 172 32 3 chr18 26399659 26399944 -59588990 - AluJo SINE Alu -19 293 1 4274 184 47 31 chr18 26399944 26401143 -59587791 - L1MB7 LINE L1 -704 6196 4951 2290 166 59 16 chr18 26401377 26401870 -59587064 - L1MC1 LINE L1 -6 6327 5814 3605 153 18 13 chr18 26401970 26402746 -59586188 - L1MC1 LINE L1 -420 5913 5130 241 254 110 81 chr18 26404145 26404354 -59584580 - L2 LINE L2 -1 3312 3098 249 295 60 71 chr18 26404780 26404963 -59583971 + MER5A DNA MER1_type 6 186 -3 * 603 223 36 2 chr18 26404963 26405096 -59583838 + MIR SINE MIR 52 191 -63 1782 152 22 38 chr18 26405324 26405640 -59583294 - AluJb SINE Alu 0 312 2 312 335 45 66 chr18 26405763 26406142 -59582792 + MLT1K LTR MaLR 129 499 -89 239 368 18 0 chr18 26407237 26407351 -59581583 - MIR3 SINE MIR -22 186 71 1389 185 53 7 chr18 26407464 26407745 -59581189 - ERVL LTR ERVL -3549 2215 1922 1683 143 0 4 chr18 26408511 26408776 -59580158 + HERVL LTR ERVL 1201 1464 -4190 12230 118 97 15 chr18 26408776 26411552 -59577382 - L1MB7 LINE L1 -3230 3632 634 1136 162 0 0 chr18 26411552 26411750 -59577184 - L1MB7 LINE L1 -6663 200 3 240 86 0 0 chr18 26411822 26411857 -59577077 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1181 133 0 28 chr18 26411881 26412035 -59576899 - AluSg/x SINE Alu -12 300 150 5408 66 133 0 chr18 26412035 26412764 -59576170 - LTR12 LTR ERV1 0 826 1 1181 133 0 28 chr18 26412764 26412789 -59576145 - AluSg/x SINE Alu -162 150 126 732 192 0 0 chr18 26412789 26412914 -59576020 - FLAM_C SINE Alu -8 125 1 22 0 0 0 chr18 26412926 26412948 -59575986 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr18 26413054 26413075 -59575859 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2694 109 31 3 chr18 26413162 26413546 -59575388 + MER48 LTR ERV1 4 398 0 258 171 0 0 chr18 26414797 26414838 -59574096 - LTR8A LTR ERV1 -2 725 685 22 91 0 0 chr18 26414973 26415006 -59573928 + AT_rich Low_complexity Low_complexity 1 33 0 255 260 42 42 chr18 26416849 26416945 -59571989 - L2 LINE L2 -31 3241 3146 518 336 138 41 chr18 26417072 26418627 -59570307 - L2 LINE L2 -367 2947 1242 2406 85 0 0 chr18 26418815 26419120 -59569814 - AluSg SINE Alu -5 305 1 1774 166 30 0 chr18 26419920 26419981 -59568953 - AluSx SINE Alu 0 312 254 207 0 0 0 chr18 26419981 26420004 -59568930 + (CAGTG)n Simple_repeat Simple_repeat 1 23 0 1774 166 30 0 chr18 26420004 26420237 -59568697 - AluSx SINE Alu -58 254 9 191 345 36 0 chr18 26420603 26420658 -59568276 + MIR SINE MIR 41 97 -111 192 339 17 0 chr18 26421101 26421160 -59567774 - MIR3 SINE MIR -5 203 144 484 299 39 19 chr18 26421167 26421493 -59567441 + L1ME2 LINE L1 5659 5907 -257 1329 156 20 54 chr18 26421727 26421821 -59567113 + MER49 LTR ERV1 1 97 -826 2265 108 0 6 chr18 26421821 26422135 -59566799 + AluSx SINE Alu 1 312 0 1329 156 20 54 chr18 26422135 26422335 -59566599 + MER49 LTR ERV1 97 285 -638 21 0 0 0 chr18 26422368 26422389 -59566545 + AT_rich Low_complexity Low_complexity 1 21 0 1388 144 8 19 chr18 26422514 26422770 -59566164 - LTR8A LTR ERV1 -465 262 10 2213 100 0 0 chr18 26422809 26423098 -59565836 - AluSg SINE Alu -21 289 1 857 152 0 0 chr18 26423109 26423234 -59565700 - AluJb SINE Alu -187 125 1 657 268 48 63 chr18 26423289 26423815 -59565119 - L1M4 LINE L1 -886 5260 4743 471 238 66 88 chr18 26423927 26424243 -59564691 - L1M4 LINE L1 -1473 4673 4351 2192 76 0 7 chr18 26424243 26424533 -59564401 - AluY SINE Alu -18 293 6 471 238 66 88 chr18 26424533 26424616 -59564318 - L1M4 LINE L1 -1795 4351 4268 2205 112 0 22 chr18 26424616 26424928 -59564006 - AluY SINE Alu -6 305 1 471 238 66 88 chr18 26424928 26425137 -59563797 - L1M4 LINE L1 -1878 4268 4078 1314 148 91 117 chr18 26425218 26425678 -59563256 + LTR7 LTR ERV1 1 448 -2 3162 89 18 0 chr18 26425880 26426328 -59562606 - LTR10C LTR ERV1 0 591 136 37763 44 54 2 chr18 26426578 26432036 -59556898 - L1P2 LINE L1 -399 5756 3 204 97 0 0 chr18 26432260 26432291 -59556643 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 2766 235 77 44 chr18 26432316 26433652 -59555282 + HAL1 LINE L1 978 2357 -150 233 292 0 28 chr18 26433657 26433729 -59555205 - MIR SINE MIR -170 92 23 220 299 63 39 chr18 26434240 26434367 -59554567 + L2 LINE L2 2237 2366 -948 202 328 0 0 chr18 26434603 26434667 -59554267 + L2 LINE L2 3245 3308 -5 2731 148 17 23 chr18 26434788 26435307 -59553627 - MER34 LTR ERV1 0 542 27 619 322 145 27 chr18 26435628 26436145 -59552789 - L2 LINE L2 -6 3307 2716 857 181 0 40 chr18 26436153 26436352 -59552582 - AluY SINE Alu -15 296 106 339 296 116 41 chr18 26436484 26436656 -59552278 - L2 LINE L2 -602 2712 2528 381 274 0 10 chr18 26436682 26436784 -59552150 - L2 LINE L2 -936 2378 2278 1944 236 107 4 chr18 26436828 26437371 -59551563 + MLT1E1 LTR MaLR 56 654 0 314 157 0 0 chr18 26437371 26437422 -59551512 - L2 LINE L2 -1052 2262 2212 422 286 66 12 chr18 26437446 26437705 -59551229 + L1M4 LINE L1 2418 2690 -3456 2369 62 7 16 chr18 26437707 26438013 -59550921 - AluY SINE Alu -6 305 3 258 95 0 0 chr18 26438078 26438120 -59550814 + L1ME3A LINE L1 5909 5950 -220 649 309 85 4 chr18 26438292 26438551 -59550383 + MLT1J2 LTR MaLR 125 404 -46 25 95 0 0 chr18 26438664 26438738 -59550196 + AT_rich Low_complexity Low_complexity 1 74 0 364 273 110 7 chr18 26439422 26439576 -59549358 + HAL1b LINE L1 561 730 -618 35 24 0 0 chr18 26441197 26441239 -59547695 + AT_rich Low_complexity Low_complexity 1 42 0 2471 257 72 25 chr18 26441926 26443042 -59545892 - L1MC4 LINE L1 0 8042 6875 254 343 142 56 chr18 26443834 26444775 -59544159 - L2 LINE L2 -3 3269 2249 214 162 0 0 chr18 26445552 26445589 -59543345 + A-rich Low_complexity Low_complexity 1 37 0 205 258 10 10 chr18 26447110 26447188 -59541746 + (TA)n Simple_repeat Simple_repeat 1 81 -16 207 0 0 0 chr18 26447188 26447211 -59541723 + (TC)n Simple_repeat Simple_repeat 2 24 0 205 258 10 10 chr18 26447211 26447229 -59541705 + (TA)n Simple_repeat Simple_repeat 80 97 0 244 184 92 13 chr18 26448361 26448437 -59540497 + MER20B DNA MER1_type 519 600 -183 312 217 33 11 chr18 26448472 26448564 -59540370 + MER20B DNA MER1_type 688 781 -2 577 253 30 24 chr18 26448726 26448892 -59540042 + MIR3 SINE MIR 19 185 -23 204 40 0 0 chr18 26453257 26453282 -59535652 + (CCCCAG)n Simple_repeat Simple_repeat 1 25 0 270 95 0 0 chr18 26453505 26453547 -59535387 + (CCCCCG)n Simple_repeat Simple_repeat 4 45 0 740 194 0 0 chr18 26454172 26454311 -59534623 + FRAM SINE Alu 1 40 0 895 209 29 10 chr18 26454749 26454955 -59533979 - L1MB2 LINE L1 -41 6130 5921 592 88 22 0 chr18 26454955 26455046 -59533888 + L1M LINE L1 5254 5346 -822 241 47 47 0 chr18 26456527 26456570 -59532364 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 340 229 38 29 chr18 26457158 26457263 -59531671 + MIR3 SINE MIR 92 197 -11 21 57 0 0 chr18 26457901 26457936 -59530998 + AT_rich Low_complexity Low_complexity 1 35 0 189 224 69 0 chr18 26458062 26458120 -59530814 + L2 LINE L2 3250 3311 -2 399 89 0 0 chr18 26458876 26458932 -59530002 + (TG)n Simple_repeat Simple_repeat 2 57 0 26173 32 1 1 chr18 26460333 26463513 -59525421 + L1P LINE L1 1808 4985 -1161 1849 168 10 7 chr18 26463639 26463948 -59524986 + AluJb SINE Alu 1 310 -2 2503 123 33 10 chr18 26464044 26464435 -59524499 + L1PB2 LINE L1 5750 6149 -2 206 156 22 0 chr18 26464521 26464566 -59524368 + (TA)n Simple_repeat Simple_repeat 2 47 0 653 313 131 17 chr18 26464584 26465131 -59523803 - L2 LINE L2 -1 3312 2703 1798 145 7 25 chr18 26465189 26465472 -59523462 - AluJo SINE Alu -24 288 11 198 0 0 0 chr18 26466215 26466237 -59522697 + (A)n Simple_repeat Simple_repeat 1 22 0 520 299 115 31 chr18 26467062 26467350 -59521584 - L2 LINE L2 -57 3256 2945 207 0 0 0 chr18 26467973 26467996 -59520938 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1310 178 21 21 chr18 26468408 26468694 -59520240 + L1MA8 LINE L1 6003 6288 -3 540 250 8 0 chr18 26469097 26469217 -59519717 + MER5B DNA MER1_type 1 121 -57 202 207 134 12 chr18 26469217 26469299 -59519635 + MER5B DNA MER1_type 87 178 0 342 248 201 7 chr18 26469311 26469460 -59519474 - MER5A DNA MER1_type -6 183 6 886 230 11 5 chr18 26469473 26469660 -59519274 + MER5A DNA MER1_type 1 188 -1 536 222 24 8 chr18 26470070 26470196 -59518738 + MIR SINE MIR 117 244 -18 181 283 67 50 chr18 26470570 26470690 -59518244 - L2 LINE L2 -94 3219 3098 205 206 33 22 chr18 26470721 26470813 -59518121 + (TTTA)n Simple_repeat Simple_repeat 1 93 0 495 0 0 0 chr18 26470813 26470868 -59518066 + (TG)n Simple_repeat Simple_repeat 2 56 0 235 352 48 48 chr18 26471715 26471840 -59517094 + L2 LINE L2 3187 3311 -2 878 290 28 8 chr18 26472149 26472397 -59516537 - MIR SINE MIR 0 262 10 21 0 0 0 chr18 26472930 26472951 -59515983 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr18 26473011 26473036 -59515898 + AT_rich Low_complexity Low_complexity 1 25 0 264 322 11 11 chr18 26473561 26473648 -59515286 + MIR SINE MIR 78 164 -98 513 267 124 32 chr18 26473681 26473898 -59515036 + MIR SINE MIR 24 260 -2 240 35 0 0 chr18 26474179 26474208 -59514726 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 220 254 0 18 chr18 26474208 26474258 -59514676 - L2 LINE L2 -14 3258 3210 538 135 0 62 chr18 26474491 26474587 -59514347 + AluJ/FLAM SINE Alu 3 92 -220 2368 70 0 22 chr18 26474587 26474899 -59514035 + AluY SINE Alu 1 305 -6 1569 133 0 0 chr18 26474900 26475126 -59513808 + AluSq SINE Alu 82 307 -6 186 43 0 0 chr18 26475252 26475275 -59513659 + (A)n Simple_repeat Simple_repeat 1 23 0 1223 207 5 0 chr18 26475537 26475759 -59513175 + MER58A DNA MER1_type 1 223 -1 21 0 0 0 chr18 26477030 26477051 -59511883 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr18 26477099 26477121 -59511813 + AT_rich Low_complexity Low_complexity 1 22 0 1851 56 0 0 chr18 26477248 26477479 -59511455 + L1PA8 LINE L1 5939 6169 -3 1740 154 0 34 chr18 26477911 26478242 -59510692 + AluJb SINE Alu 6 312 0 613 191 0 0 chr18 26478406 26478516 -59510418 + AluJb SINE Alu 196 305 -7 1989 110 29 0 chr18 26478683 26478993 -59509941 - AluSx SINE Alu 0 318 1 26 0 0 0 chr18 26480438 26480464 -59508470 + AT_rich Low_complexity Low_complexity 1 26 0 2282 100 0 7 chr18 26480567 26480876 -59508058 - AluSp SINE Alu -5 308 2 2513 121 18 3 chr18 26481374 26481763 -59507171 - L1PA13 LINE L1 0 6163 5769 7474 36 3 0 chr18 26481771 26482837 -59506097 - L1PA4 LINE L1 -3 6152 5086 1738 118 9 1 chr18 26482839 26483116 -59505818 - L1PA12 LINE L1 -298 5870 5593 456 311 69 42 chr18 26483121 26483410 -59505524 - L1MEd LINE L1 -4958 1161 865 234 258 16 0 chr18 26483606 26483668 -59505266 + CT-rich Low_complexity Low_complexity 3 65 0 612 224 18 36 chr18 26484792 26484943 -59503991 - L1MD3 LINE L1 -8 7987 7838 1912 184 60 52 chr18 26484943 26485444 -59503490 + MLT1D LTR MaLR 1 505 0 612 224 18 36 chr18 26485444 26485457 -59503477 - L1MD3 LINE L1 -157 7838 7826 23 0 0 0 chr18 26485870 26485893 -59503041 + AT_rich Low_complexity Low_complexity 1 23 0 1082 238 87 68 chr18 26486888 26487188 -59501746 - MLT1D LTR MaLR 0 505 191 357 24 0 0 chr18 26487188 26487230 -59501704 + (TG)n Simple_repeat Simple_repeat 1 42 0 1082 238 87 68 chr18 26487230 26487425 -59501509 - MLT1D LTR MaLR -314 191 1 241 309 106 27 chr18 26487548 26487736 -59501198 + MLT1K LTR MaLR 316 518 -70 241 248 20 69 chr18 26487843 26487944 -59500990 - MIR SINE MIR -1 261 166 764 250 53 53 chr18 26488329 26488440 -59500494 + MIR SINE MIR 4 114 -148 2128 126 10 10 chr18 26488440 26488749 -59500185 + AluSx SINE Alu 1 309 -3 764 250 53 53 chr18 26488749 26488881 -59500053 + MIR SINE MIR 113 247 -15 230 319 0 0 chr18 26488901 26488973 -59499961 + L2 LINE L2 3242 3313 0 198 300 17 0 chr18 26489044 26489104 -59499830 - L2 LINE L2 -6 3266 3206 807 341 10 26 chr18 26489156 26489461 -59499473 - L3 LINE CR1 -220 1357 1058 7594 27 0 0 chr18 26491547 26492580 -59496354 - L1PA4 LINE L1 -3 6152 5117 860 289 68 64 chr18 26493013 26493481 -59495453 + LTR33 LTR ERVL 1 470 -51 1414 206 4 11 chr18 26493578 26493845 -59495089 + AluJo SINE Alu 34 298 -14 450 338 84 57 chr18 26493996 26494532 -59494402 - L2 LINE L2 -178 3094 2550 24 0 0 0 chr18 26495017 26495041 -59493893 + AT_rich Low_complexity Low_complexity 1 24 0 219 261 0 0 chr18 26496181 26496227 -59492707 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 1947 156 42 0 chr18 26496238 26496571 -59492363 + MER7A DNA MER2_type 2 346 0 2116 213 48 29 chr18 26496971 26497257 -59491677 - MLT1E3 LTR MaLR -54 570 291 201 39 0 0 chr18 26497257 26497283 -59491651 + (TG)n Simple_repeat Simple_repeat 1 26 0 1706 173 4 0 chr18 26497290 26497561 -59491373 - AluJb SINE Alu -30 282 11 2116 213 48 29 chr18 26497561 26497607 -59491327 - MLT1E3 LTR MaLR -338 286 242 189 0 0 0 chr18 26497607 26497628 -59491306 + (TC)n Simple_repeat Simple_repeat 2 22 0 2116 213 48 29 chr18 26497628 26497845 -59491089 - MLT1E3 LTR MaLR -382 242 1 2331 96 0 10 chr18 26498449 26498763 -59490171 + AluSx SINE Alu 1 311 -1 2104 116 3 10 chr18 26501499 26501792 -59487142 + AluSx SINE Alu 1 291 -21 1399 175 37 72 chr18 26502070 26502447 -59486487 - MLT1A1 LTR MaLR 0 365 2 306 257 29 0 chr18 26503117 26503187 -59485747 - MIR3 SINE MIR -23 185 114 508 259 97 57 chr18 26505927 26506298 -59482636 + L1MC4a LINE L1 5574 5959 -1849 2297 91 0 3 chr18 26506315 26506600 -59482334 + AluSg SINE Alu 1 284 -26 24 0 0 0 chr18 26506601 26506625 -59482309 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr18 26506814 26506839 -59482095 + AT_rich Low_complexity Low_complexity 1 25 0 945 254 78 54 chr18 26507040 26507264 -59481670 + LTR16C LTR ERVL 149 385 -106 2126 109 0 3 chr18 26507264 26507558 -59481376 - AluSg SINE Alu -1 309 17 945 254 78 54 chr18 26507558 26507668 -59481266 + LTR16C LTR ERVL 385 491 0 938 339 86 38 chr18 26507913 26508831 -59480103 + ERVL LTR ERVL 362 1323 -3673 292 111 63 16 chr18 26508859 26508922 -59480012 - MER53 DNA DNA -84 105 40 234 0 0 0 chr18 26508926 26508952 -59479982 + (TG)n Simple_repeat Simple_repeat 1 26 0 1448 335 71 23 chr18 26508994 26510509 -59478425 + ERVL LTR ERVL 1329 3012 -2473 433 375 19 3 chr18 26510503 26510815 -59478119 + ERVL LTR ERVL 4329 4645 -1119 * 472 183 17 8 chr18 26510828 26510948 -59477986 + LTR16C LTR ERVL 367 487 -4 1382 73 0 6 chr18 26511693 26511870 -59477064 - AluY SINE Alu -135 176 1 855 235 33 0 chr18 26511870 26512053 -59476881 - MER58A DNA MER1_type -33 191 3 1587 160 87 0 chr18 26512834 26513109 -59475825 - AluJb SINE Alu -13 299 1 185 250 0 0 chr18 26516798 26516842 -59472092 - MIR3 SINE MIR -10 198 155 403 91 0 0 chr18 26516911 26516977 -59471957 - L1PB4 LINE L1 0 6156 6091 1867 220 30 24 chr18 26516995 26517491 -59471443 - MLT1D LTR MaLR -6 499 1 461 259 82 34 chr18 26517549 26517842 -59471092 + MER113 DNA MER1_type? 175 481 -40 281 274 0 0 chr18 26518063 26518136 -59470798 - L3 LINE CR1 -219 1358 1286 265 353 82 16 chr18 26518141 26518325 -59470609 + MIR SINE MIR 8 203 -59 366 296 0 28 chr18 26518348 26518456 -59470478 + MER94 DNA DNA 4 108 -26 243 363 68 16 chr18 26518504 26518694 -59470240 - L3 LINE CR1 -284 1293 1094 373 286 197 6 chr18 26518706 26518884 -59470050 + MIR SINE MIR 42 253 -9 381 268 39 33 chr18 26518959 26519112 -59469822 - L2 LINE L2 -49 3264 3111 695 269 43 106 chr18 26519142 26519403 -59469531 - L3 LINE CR1 -509 1068 792 264 30 0 0 chr18 26519403 26519436 -59469498 + (TG)n Simple_repeat Simple_repeat 2 34 0 695 269 43 106 chr18 26519436 26519451 -59469483 - L3 LINE CR1 -785 792 778 2351 98 0 10 chr18 26519451 26519757 -59469177 - AluSx SINE Alu -5 307 5 695 269 43 106 chr18 26519757 26519922 -59469012 - L3 LINE CR1 -799 778 654 25 0 0 0 chr18 26520027 26520052 -59468882 + AT_rich Low_complexity Low_complexity 1 25 0 29 0 0 0 chr18 26520336 26520365 -59468569 + AT_rich Low_complexity Low_complexity 1 29 0 2299 106 6 3 chr18 26520380 26520691 -59468243 + AluSx SINE Alu 1 312 0 895 219 30 60 chr18 26520999 26521264 -59467670 + L2 LINE L2 3048 3304 -9 330 294 76 8 chr18 26521477 26521596 -59467338 - MIR SINE MIR -62 200 74 373 278 52 0 chr18 26521628 26521725 -59467209 + MIR3 SINE MIR 68 169 -39 658 283 67 27 chr18 26522066 26522289 -59466645 - MIR SINE MIR 0 262 31 2075 126 64 14 chr18 26523372 26523729 -59465205 - THE1C LTR MaLR 0 375 1 2247 122 0 0 chr18 26524688 26524991 -59463943 - AluSg SINE Alu -7 303 1 218 340 11 0 chr18 26526102 26526213 -59462721 + (TA)n Simple_repeat Simple_repeat 1 112 0 734 276 43 89 chr18 26526333 26526724 -59462210 + L2 LINE L2 2281 2653 -661 712 289 123 50 chr18 26526726 26527211 -59461723 + L2 LINE L2 2760 3281 -32 2331 101 7 0 chr18 26527274 26527581 -59461353 - AluSg SINE Alu -1 309 1 232 281 31 0 chr18 26528031 26528095 -59460839 + (TCTCTG)n Simple_repeat Simple_repeat 1 66 0 238 319 33 55 chr18 26528282 26528373 -59460561 + L2 LINE L2 3184 3272 0 2382 112 36 17 chr18 26531197 26531554 -59457380 - THE1B LTR MaLR 0 364 1 392 301 77 38 chr18 26532599 26532808 -59456126 + MIR SINE MIR 43 259 -3 367 254 121 29 chr18 26532809 26532982 -59455952 - LTR16A1 LTR ERVL -15 442 254 696 204 210 0 chr18 26533381 26533562 -59455372 + MER20 DNA MER1_type 1 219 0 384 342 7 0 chr18 26533809 26533961 -59454973 - ERVL LTR ERVL -1419 4345 4193 3496 197 46 25 chr18 26534130 26534155 -59454779 - L1MB7 LINE L1 -10 6410 6387 2280 97 0 7 chr18 26534155 26534454 -59454480 + AluSc SINE Alu 1 297 -12 3496 197 46 25 chr18 26534454 26535312 -59453622 - L1MB7 LINE L1 -33 6387 5508 * 5266 239 46 14 chr18 26535300 26537028 -59451906 - L1MB7 LINE L1 -1243 5139 3356 3326 110 0 2 chr18 26537032 26537522 -59451412 - L1PA13 LINE L1 0 6163 5675 6605 177 41 10 chr18 26537522 26539215 -59449719 - L1PA12 LINE L1 -5513 2068 72 2809 249 85 26 chr18 26539204 26541364 -59447570 - L1MB7 LINE L1 -3026 3356 1061 * 526 253 93 42 chr18 26541367 26541604 -59447330 + LTR40b LTR ERVL 210 458 -4 301 176 54 14 chr18 26541607 26541681 -59447253 + HERVL40 LTR ERVL 1 77 -5453 183 42 0 0 chr18 26542015 26542039 -59446895 + (TTG)n Simple_repeat Simple_repeat 2 25 0 375 115 71 106 chr18 26542054 26542167 -59446767 + HERVL40 LTR ERVL 1098 1206 -4324 357 261 42 42 chr18 26542756 26542875 -59446059 + HERVL40 LTR ERVL 1373 1491 -4039 967 294 5 51 chr18 26542963 26543354 -59445580 + HERVL40 LTR ERVL 2050 2422 -3108 * 3231 262 93 31 chr18 26543337 26544544 -59444390 + HERVL40 LTR ERVL 2831 4111 -1419 1772 244 111 39 chr18 26544555 26545178 -59443756 + HERVL40 LTR ERVL 4492 5159 -371 244 347 0 0 chr18 26545178 26545253 -59443681 - MLT1G1 LTR MaLR -408 147 73 4400 95 33 21 chr18 26545288 26545963 -59442971 + L1PB1 LINE L1 5468 6150 -1 1800 169 4 0 chr18 26545993 26546265 -59442669 + AluJb SINE Alu 17 289 -23 269 206 0 32 chr18 26546266 26546329 -59442605 - MLT1G1 LTR MaLR -534 61 1 444 259 78 0 chr18 26546531 26546647 -59442287 + L2 LINE L2 3188 3312 -1 2054 122 0 20 chr18 26547723 26548026 -59440908 - AluSx SINE Alu -15 297 1 214 148 19 56 chr18 26548137 26548191 -59440743 + A-rich Low_complexity Low_complexity 3 54 0 2142 238 100 40 chr18 26549025 26549322 -59439612 - L1ME3A LINE L1 -5 6165 5887 8070 136 12 2 chr18 26549322 26550609 -59438325 - HSMAR2 DNA Mariner -2 1300 1 2142 238 100 40 chr18 26550609 26551091 -59437843 - L1ME3A LINE L1 -283 5887 5331 2391 84 0 3 chr18 26551091 26551390 -59437544 - AluY SINE Alu -12 299 2 2142 238 100 40 chr18 26551390 26551437 -59437497 - L1ME3A LINE L1 -839 5331 5288 289 264 146 14 chr18 26551511 26551655 -59437279 - L1ME3A LINE L1 -979 5167 5005 191 35 0 35 chr18 26551687 26551716 -59437218 + (TAA)n Simple_repeat Simple_repeat 2 29 0 320 245 43 21 chr18 26551760 26551854 -59437080 - MIR SINE MIR -74 188 93 25 0 0 0 chr18 26552529 26552554 -59436380 + AT_rich Low_complexity Low_complexity 1 25 0 267 298 132 0 chr18 26553724 26553838 -59435096 - L2 LINE L2 0 3313 3185 222 295 0 51 chr18 26554842 26554920 -59434014 - L2 LINE L2 -217 3055 2982 503 278 18 17 chr18 26556945 26557085 -59431849 + MIR SINE MIR 1 135 -73 329 284 75 91 chr18 26557180 26557739 -59431195 + L1M4 LINE L1 3811 4360 -1786 327 321 18 18 chr18 26557882 26557991 -59430943 + MIR SINE MIR 11 119 -143 11718 56 84 5 chr18 26558287 26559858 -59429076 + L1P LINE L1 4 1699 -4447 335 275 0 22 chr18 26560132 26560223 -59428711 - MIR SINE MIR -56 206 118 292 311 106 0 chr18 26560580 26560712 -59428222 - MER69 DNA AcHobo -2380 146 1 1988 131 3 0 chr18 26560737 26561048 -59427886 + AluSx SINE Alu 1 312 0 221 245 0 0 chr18 26561278 26561339 -59427595 + (TATG)n Simple_repeat Simple_repeat 1 61 0 1527 196 26 59 chr18 26561460 26561847 -59427087 + MLT1A2 LTR MaLR 1 374 0 262 243 40 0 chr18 26562091 26562165 -59426769 + (TTTA)n Simple_repeat Simple_repeat 2 78 0 255 231 102 37 chr18 26563168 26563276 -59425658 - MIR SINE MIR 0 262 148 3706 151 19 23 chr18 26563681 26564378 -59424556 + L1MB2 LINE L1 5477 6170 -1 1540 147 14 11 chr18 26564416 26564702 -59424232 - L1MA3 LINE L1 0 6305 6019 26 0 0 0 chr18 26565974 26566000 -59422934 + AT_rich Low_complexity Low_complexity 1 26 0 1288 201 41 52 chr18 26566164 26566532 -59422402 + MLT1A1 LTR MaLR 1 364 -1 193 232 18 36 chr18 26566662 26566718 -59422216 - MER5B DNA MER1_type -123 55 1 439 273 61 8 chr18 26567181 26567313 -59421621 + MIR SINE MIR 1 139 -123 28 29 0 0 chr18 26567349 26567384 -59421550 + AT_rich Low_complexity Low_complexity 1 35 0 348 292 125 35 chr18 26567676 26567820 -59421114 - L2 LINE L2 0 3272 3116 13783 138 34 22 chr18 26567822 26570211 -59418723 - Tigger1 DNA MER2_type 0 2418 1 2056 89 0 32 chr18 26570248 26570530 -59418404 + AluSg SINE Alu 21 293 -17 207 0 0 0 chr18 26571304 26571327 -59417607 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 353 260 125 0 chr18 26572347 26572443 -59416491 + MER69 DNA AcHobo 218 325 -901 293 238 0 89 chr18 26572484 26572520 -59416414 + MER69 DNA AcHobo 477 515 -711 2825 171 44 26 chr18 26572520 26573064 -59415870 + MLT2B3 LTR ERVL 1 554 0 293 238 0 89 chr18 26573064 26573128 -59415806 + MER69 DNA AcHobo 515 568 -658 931 207 192 15 chr18 26573174 26573565 -59415369 + MER69 DNA AcHobo 2024 2483 -43 822 148 0 30 chr18 26574067 26574202 -59414732 - FLAM_C SINE Alu -2 131 1 30 0 0 0 chr18 26574572 26574602 -59414332 + AT_rich Low_complexity Low_complexity 1 30 0 237 33 0 0 chr18 26575997 26576027 -59412907 + (TA)n Simple_repeat Simple_repeat 2 31 0 198 0 0 0 chr18 26576027 26576049 -59412885 + (T)n Simple_repeat Simple_repeat 1 22 0 201 328 0 0 chr18 26576278 26576336 -59412598 - L2 LINE L2 -2 3270 3213 373 327 93 13 chr18 26576603 26576753 -59412181 - MIR SINE MIR -73 189 28 213 44 22 44 chr18 26576776 26576821 -59412113 + (TTATA)n Simple_repeat Simple_repeat 1 44 0 25 51 0 0 chr18 26576972 26577011 -59411923 + AT_rich Low_complexity Low_complexity 1 39 0 2137 215 65 48 chr18 26577264 26577915 -59411019 - L1MC4 LINE L1 -142 7900 7239 1352 249 58 13 chr18 26577935 26577951 -59410983 - L1MC4 LINE L1 -950 7092 7078 2211 104 0 7 chr18 26577951 26578248 -59410686 - AluSx SINE Alu -17 295 1 1352 249 58 13 chr18 26578248 26578609 -59410325 - L1MC4 LINE L1 -964 7078 6698 870 232 45 65 chr18 26578727 26579037 -59409897 + MLT2C1 LTR ERVL 59 362 -35 428 235 129 8 chr18 26579045 26579177 -59409757 - L1MC4 LINE L1 -1436 6606 6459 938 219 33 14 chr18 26579694 26579909 -59409025 + MER20 DNA MER1_type 1 219 0 412 331 51 0 chr18 26580381 26580559 -59408375 + MER5A DNA MER1_type 1 187 -2 252 198 0 50 chr18 26581328 26581429 -59407505 + (TTA)n Simple_repeat Simple_repeat 3 98 0 2271 66 7 3 chr18 26581436 26581737 -59407197 + L1PA10 LINE L1 5867 6168 0 5035 223 35 35 chr18 26581908 26584406 -59404528 - L1MD2 LINE L1 -10 6349 3855 1528 223 62 47 chr18 26585281 26585729 -59403205 - MLT1C LTR MaLR -4 463 9 224 281 177 10 chr18 26586681 26586777 -59402157 - MIR SINE MIR -94 168 57 706 219 0 0 chr18 26587346 26587469 -59401465 + FLAM_A SINE Alu 1 123 -10 2329 123 16 27 chr18 26588818 26589184 -59399750 + THE1B LTR MaLR 1 362 -2 366 242 0 11 chr18 26589942 26590033 -59398901 - MLT1B LTR MaLR 0 390 301 34 84 0 0 chr18 26590374 26590457 -59398477 + AT_rich Low_complexity Low_complexity 1 83 0 2122 131 0 0 chr18 26590471 26590761 -59398173 - AluSx SINE Alu -20 292 3 282 271 215 0 chr18 26590882 26591026 -59397908 - L3 LINE CR1 -1 1576 1402 1925 163 23 9 chr18 26591041 26591384 -59397550 - MER7A DNA MER2_type 0 346 1 2893 225 86 26 chr18 26591615 26591717 -59397217 - L1ME1 LINE L1 -18 6148 6054 2469 74 0 3 chr18 26591717 26592028 -59396906 - AluY SINE Alu -1 310 1 2893 225 86 26 chr18 26592028 26593466 -59395468 - L1ME1 LINE L1 -112 6054 4507 498 253 77 4 chr18 26593633 26593866 -59395068 + L1M4 LINE L1 4229 4478 -1668 1416 198 146 2 chr18 26594021 26594405 -59394529 - MER89 LTR ERV1 0 559 19 223 312 39 13 chr18 26594534 26594611 -59394323 - L2 LINE L2 -268 3004 2926 201 300 0 0 chr18 26595346 26595396 -59393538 + GA-rich Low_complexity Low_complexity 5 54 0 259 329 171 0 chr18 26596696 26596842 -59392092 + L2 LINE L2 3143 3313 0 7613 229 109 25 chr18 26597279 26600996 -59387938 + L1MDa LINE L1 19 4045 -2495 539 287 11 0 chr18 26601308 26601482 -59387452 - L1M4 LINE L1 -1254 4892 4717 467 300 61 25 chr18 26602597 26602754 -59386180 + MIR SINE MIR 29 191 -62 2418 41 0 76 chr18 26604442 26604786 -59384148 + AluYb8 SINE Alu 1 318 0 1900 176 0 0 chr18 26605127 26605423 -59383511 - AluJb SINE Alu -16 296 1 344 265 94 47 chr18 26606177 26606411 -59382523 + L1MDa LINE L1 1222 1466 -5255 1200 249 88 78 chr18 26606412 26607326 -59381608 + L1MDa LINE L1 4498 5420 -1120 791 282 14 5 chr18 26607953 26608166 -59380768 - MIR SINE MIR -13 249 35 954 185 17 0 chr18 26608768 26608941 -59379993 - AluJb SINE Alu 0 312 137 412 301 117 12 chr18 26609408 26609571 -59379363 - MIR SINE MIR -70 192 13 524 193 9 0 chr18 26610033 26610147 -59378787 + (CAT)n Simple_repeat Simple_repeat 3 117 0 292 232 24 24 chr18 26610718 26610800 -59378134 - MIR SINE MIR -77 185 104 1580 164 0 0 chr18 26611231 26611469 -59377465 + AluSx SINE Alu 1 238 -74 216 0 0 0 chr18 26611489 26611513 -59377421 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 222 342 108 0 chr18 26612879 26612999 -59375935 - L2 LINE L2 0 3313 3181 444 262 115 86 chr18 26613347 26613591 -59375343 - MIR SINE MIR 0 262 12 2337 96 0 3 chr18 26614035 26614336 -59374598 + AluSq SINE Alu 1 300 -13 674 322 47 0 chr18 26614556 26614792 -59374142 + MIR SINE MIR 7 253 -9 201 263 35 0 chr18 26615178 26615235 -59373699 - L2 LINE L2 -220 3052 2994 188 143 302 48 chr18 26615271 26615334 -59373600 + L2 LINE L2 3193 3271 -1 243 0 0 0 chr18 26615773 26615800 -59373134 + (TG)n Simple_repeat Simple_repeat 2 28 0 307 241 46 46 chr18 26616751 26616838 -59372096 + L1MC4 LINE L1 6617 6703 -1339 1365 184 58 84 chr18 26616966 26617347 -59371587 - MLT1A2 LTR MaLR 0 374 4 737 287 79 45 chr18 26617348 26617813 -59371121 + L2 LINE L2 2791 3280 -33 303 196 0 0 chr18 26617832 26617888 -59371046 + L1MC4 LINE L1 6648 6703 -1339 219 69 0 0 chr18 26617933 26617962 -59370972 + (CATA)n Simple_repeat Simple_repeat 2 30 0 1893 135 81 3 chr18 26617962 26618295 -59370639 - MER46B DNA MER2_type -2 234 1 1386 169 42 60 chr18 26619495 26619779 -59369155 - MLT2B2 LTR ERVL -236 279 1 333 263 53 18 chr18 26620273 26620387 -59368547 - L2 LINE L2 0 3313 3196 537 331 44 19 chr18 26620915 26621135 -59367799 - MIR SINE MIR -6 256 34 1041 223 43 29 chr18 26621308 26621687 -59367247 + MLT2B3 LTR ERVL 165 548 -6 2372 88 135 21 chr18 26622466 26622850 -59366084 - MSTA LTR MaLR 0 428 1 459 145 0 0 chr18 26624673 26624756 -59364178 + (GA)n Simple_repeat Simple_repeat 2 84 0 30 0 0 0 chr18 26626282 26626312 -59362622 + AT_rich Low_complexity Low_complexity 1 30 0 5975 219 39 40 chr18 26626903 26628773 -59360161 + L1M4 LINE L1 3435 5302 -844 3336 194 49 22 chr18 26628775 26629547 -59359387 - L1MB7 LINE L1 -120 6064 5272 2291 107 3 3 chr18 26630343 26630653 -59358281 + AluSq SINE Alu 1 310 -3 25 0 0 0 chr18 26630653 26630678 -59358256 + AT_rich Low_complexity Low_complexity 1 25 0 3855 86 24 2 chr18 26631516 26632063 -59356871 + L1PA13 LINE L1 5602 6160 -3 406 244 72 32 chr18 26632072 26632293 -59356641 - L1MB7 LINE L1 -1603 4543 4314 467 283 13 20 chr18 26632332 26632484 -59356450 + MIR SINE MIR 112 262 0 22 0 0 0 chr18 26633728 26633750 -59355184 + AT_rich Low_complexity Low_complexity 1 22 0 252 184 0 0 chr18 26633821 26633870 -59355064 + (CACG)n Simple_repeat Simple_repeat 3 51 0 294 29 0 0 chr18 26633875 26633910 -59355024 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 3550 68 9 3 chr18 26633910 26634381 -59354553 - L1PA8 LINE L1 -22 6150 5679 355 261 56 33 chr18 26634420 26634600 -59354334 - L1ME4a LINE L1 -257 5864 5681 410 310 63 68 chr18 26634601 26634965 -59353969 - L1ME4a LINE L1 -490 5631 5255 274 243 29 0 chr18 26635030 26635100 -59353834 + (TATATG)n Simple_repeat Simple_repeat 5 76 0 532 371 52 45 chr18 26636012 26636414 -59352520 - L2 LINE L2 -1 3271 2867 1052 228 18 18 chr18 26636633 26636857 -59352077 + MER58A DNA MER1_type 1 224 0 34 42 0 0 chr18 26636971 26637019 -59351915 + AT_rich Low_complexity Low_complexity 1 48 0 196 333 151 13 chr18 26637383 26637542 -59351392 - MIR SINE MIR -3 259 79 832 161 12 36 chr18 26638294 26638462 -59350472 - FRAM SINE Alu -8 168 5 779 178 0 25 chr18 26638486 26638643 -59350291 - L1 LINE L1 -1689 4457 4305 1728 144 100 7 chr18 26638645 26639011 -59349923 - MSTA LTR MaLR 0 428 1 333 114 0 148 chr18 26639011 26639099 -59349835 - L1 LINE L1 -1839 4307 4233 1275 120 0 0 chr18 26639099 26639325 -59349609 - AluSg/x SINE Alu 0 362 137 4480 162 20 24 chr18 26639326 26640191 -59348743 - L1 LINE L1 -1904 4242 3382 1942 127 7 23 chr18 26641270 26641577 -59347357 + AluJb SINE Alu 1 302 -10 216 67 0 0 chr18 26643758 26643788 -59345146 + (GA)n Simple_repeat Simple_repeat 2 31 0 392 50 0 17 chr18 26644420 26644480 -59344454 + (CA)n Simple_repeat Simple_repeat 2 60 0 186 133 0 0 chr18 26644638 26644668 -59344266 + (TC)n Simple_repeat Simple_repeat 1 30 0 322 339 63 56 chr18 26644929 26645310 -59343624 - L1ME3A LINE L1 -238 5932 5535 372 183 14 0 chr18 26645779 26645850 -59343084 - MLT1D LTR MaLR -63 442 371 205 283 0 38 chr18 26646842 26646895 -59342039 + MIR3 SINE MIR 106 156 -52 233 387 28 0 chr18 26647334 26647440 -59341494 - L2 LINE L2 -20 3293 3185 225 222 0 0 chr18 26648668 26648713 -59340221 - L3 LINE CR1 -4 1573 1529 248 310 16 85 chr18 26648715 26648816 -59340118 - MER5A DNA MER1_type 0 189 97 1978 218 26 28 chr18 26648816 26649284 -59339650 - MLT1C LTR MaLR 0 467 1 248 310 16 85 chr18 26649284 26649311 -59339623 - MER5A DNA MER1_type -92 97 70 254 263 0 0 chr18 26649360 26649417 -59339517 - MIR3 SINE MIR -54 154 98 1042 219 179 8 chr18 26650346 26650462 -59338472 + AluSg SINE Alu 1 96 -204 519 17 0 0 chr18 26650462 26650522 -59338412 + (CA)n Simple_repeat Simple_repeat 1 60 0 1042 219 179 8 chr18 26650522 26650651 -59338283 + AluSg SINE Alu 96 288 -12 558 216 12 12 chr18 26650666 26650828 -59338106 + GA-rich Low_complexity Low_complexity 3 164 0 237 315 103 27 chr18 26651452 26651598 -59337336 + MER5A DNA MER1_type 33 189 0 579 152 0 10 chr18 26652061 26652160 -59336774 + MER4A LTR ERV1 1 98 -566 1573 142 3 79 chr18 26652160 26652534 -59336400 + MER4A LTR ERV1 261 664 0 358 331 97 27 chr18 26653788 26654087 -59334847 - L2 LINE L2 -427 2887 2568 250 220 0 0 chr18 26654126 26654176 -59334758 - L2 LINE L2 -6 3307 3258 184 339 0 15 chr18 26654528 26654593 -59334341 - L2 LINE L2 -514 2800 2737 22 35 0 0 chr18 26658234 26658263 -59330671 + AT_rich Low_complexity Low_complexity 1 29 0 592 173 0 110 chr18 26659268 26659441 -59329493 - MLT1D LTR MaLR -350 155 2 309 326 23 23 chr18 26659794 26659923 -59329011 + MLT2E LTR ERVL 36 164 -464 265 244 24 47 chr18 26660017 26660144 -59328790 + MLT2E LTR ERVL 505 628 0 2230 121 0 0 chr18 26660443 26660740 -59328194 - AluSx SINE Alu -15 297 1 210 44 0 111 chr18 26661133 26661178 -59327756 + (TAAAAA)n Simple_repeat Simple_repeat 3 42 0 377 219 9 9 chr18 26662422 26662527 -59326407 + MER103 DNA DNA 17 121 -45 2240 106 0 3 chr18 26664430 26664731 -59324203 - AluSq SINE Alu -13 300 1 3368 113 20 2 chr18 26665600 26666103 -59322831 + MER41E LTR ERV1 1 512 0 255 261 11 68 chr18 26666139 26666227 -59322707 + MIR SINE MIR 110 192 -70 272 270 36 54 chr18 26666317 26666428 -59322506 - MIR SINE MIR -88 174 66 365 290 111 51 chr18 26666556 26667025 -59321909 + L1ME LINE L1 5308 5817 -304 273 331 86 27 chr18 26667713 26667970 -59320964 + LTR33A LTR ERVL 252 523 0 2234 131 0 6 chr18 26668124 26668437 -59320497 + AluSq SINE Alu 1 311 -2 280 285 161 15 chr18 26668453 26668590 -59320344 - MIR SINE MIR -101 161 5 900 327 88 56 chr18 26668883 26669950 -59318984 - L2 LINE L2 -88 3184 2078 1894 48 0 13 chr18 26670243 26670474 -59318460 + AluY SINE Alu 84 311 0 412 113 0 0 chr18 26671427 26671498 -59317436 - L1M4 LINE L1 -847 5299 5229 1655 95 14 0 chr18 26672438 26672659 -59316275 - AluSq SINE Alu -89 224 1 1840 178 39 0 chr18 26672660 26672998 -59315936 + LTR51 LTR ERV1 321 671 0 2673 23 0 10 chr18 26675351 26675658 -59313276 + AluY SINE Alu 1 304 -7 25 0 0 0 chr18 26676825 26676850 -59312084 + AT_rich Low_complexity Low_complexity 1 25 0 535 275 49 62 chr18 26677648 26677892 -59311042 + MIR SINE MIR 22 262 0 6469 254 58 12 chr18 26678498 26681136 -59307798 + L1M2a LINE L1 1 2804 -4364 218 0 94 0 chr18 26681136 26681168 -59307766 + A-rich Low_complexity Low_complexity 2 36 0 6469 254 58 12 chr18 26681168 26681380 -59307554 + L1M2a LINE L1 2804 3005 -4163 1703 119 14 10 chr18 26681601 26681896 -59307038 - MER6 DNA MER2_type 0 865 310 1043 229 50 30 chr18 26681896 26682258 -59306676 + L1MA9 LINE L1 5904 6272 -40 802 196 232 57 chr18 26683223 26683555 -59305379 + MSTD LTR MaLR 1 390 -6 239 306 41 69 chr18 26683694 26683759 -59305175 - MLT1J LTR MaLR -8 503 438 2186 105 34 0 chr18 26683759 26684054 -59304880 - AluSq SINE Alu -7 306 2 239 306 41 69 chr18 26684054 26684233 -59304701 - MLT1J LTR MaLR -73 438 266 207 368 15 0 chr18 26685611 26685679 -59303255 - MIR3 SINE MIR -32 176 108 2678 251 63 78 chr18 26686063 26686704 -59302230 + L2 LINE L2 1749 2365 -949 1583 119 22 0 chr18 26686704 26686930 -59302004 - AluSq SINE Alu -82 231 1 2678 251 63 78 chr18 26686930 26687453 -59301481 + L2 LINE L2 2365 2895 -419 318 327 183 15 chr18 26688854 26689056 -59299878 + MIR SINE MIR 19 254 -8 183 276 138 0 chr18 26689452 26689539 -59299395 - L2 LINE L2 -1324 1990 1892 29 28 0 0 chr18 26690664 26690700 -59298234 + AT_rich Low_complexity Low_complexity 1 36 0 617 180 31 0 chr18 26692750 26692878 -59296056 - L1MA10 LINE L1 -263 5905 5774 * 1616 168 30 81 chr18 26692869 26693303 -59295631 + L1MA10 LINE L1 5914 6325 -9 482 314 62 14 chr18 26693735 26693945 -59294989 + MIR SINE MIR 10 229 -33 234 300 0 0 chr18 26694003 26694053 -59294881 - L2 LINE L2 -22 3250 3201 2011 146 0 0 chr18 26694126 26694421 -59294513 - AluSc SINE Alu -12 297 3 552 276 113 48 chr18 26695184 26695423 -59293511 + HAL1b LINE L1 103 325 -1023 1332 179 28 106 chr18 26695423 26695819 -59293115 + MLT1A1 LTR MaLR 1 365 0 552 276 113 48 chr18 26695819 26696098 -59292836 + HAL1b LINE L1 325 664 -684 1646 154 40 40 chr18 26696098 26696397 -59292537 + AluJo SINE Alu 1 299 -13 552 276 113 48 chr18 26696397 26696454 -59292480 + HAL1b LINE L1 664 716 -632 491 278 151 23 chr18 26696515 26696680 -59292254 + HAL1b LINE L1 952 1095 -253 4591 146 19 14 chr18 26696680 26697665 -59291269 - L1PA16 LINE L1 -16 6150 5128 2340 87 0 3 chr18 26697665 26697975 -59290959 - AluY SINE Alu -2 309 1 4591 146 19 14 chr18 26697975 26698346 -59290588 - L1PA16 LINE L1 -1038 5128 4760 491 278 151 23 chr18 26698346 26698532 -59290402 + HAL1b LINE L1 1095 1348 0 28 29 0 0 chr18 26699895 26699930 -59289004 + AT_rich Low_complexity Low_complexity 1 35 0 197 377 27 14 chr18 26701912 26702058 -59286876 - MIR3 SINE MIR -45 163 16 2320 166 110 17 chr18 26702829 26702871 -59286063 - MLT2B2 LTR ERVL 0 515 478 435 38 0 0 chr18 26702871 26702924 -59286010 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 2320 166 110 17 chr18 26702924 26703352 -59285582 - MLT2B2 LTR ERVL -37 478 1 259 346 40 10 chr18 26703634 26703735 -59285199 + L2 LINE L2 3206 3309 -4 439 307 40 31 chr18 26704076 26704304 -59284630 + LTR40a LTR ERVL 192 421 -98 773 273 88 4 chr18 26704551 26704811 -59284123 + L1ME3 LINE L1 5878 6159 -3 1385 180 65 84 chr18 26705023 26705451 -59283483 + MLT2C2 LTR ERVL 1 420 -44 2061 148 58 0 chr18 26705465 26705810 -59283124 + MER47A DNA MER2_type 2 366 0 212 240 0 13 chr18 26705815 26705890 -59283044 + (CA)n Simple_repeat Simple_repeat 2 75 0 2312 95 3 7 chr18 26706263 26706568 -59282366 - AluSq SINE Alu -6 307 4 378 0 0 0 chr18 26707325 26707367 -59281567 + (CA)n Simple_repeat Simple_repeat 2 43 0 922 298 66 16 chr18 26707392 26707832 -59281102 + LTR16B LTR ERVL 1 462 -2 1604 177 70 23 chr18 26708491 26708835 -59280099 - MLT1A1 LTR MaLR -2 363 4 293 297 148 31 chr18 26709045 26709274 -59279660 + MIR SINE MIR 5 260 -2 208 195 0 24 chr18 26712211 26712252 -59276682 - MER5B DNA MER1_type -4 174 135 810 293 98 10 chr18 26712979 26713644 -59275290 + L1M1 LINE L1 2662 3468 -4278 249 33 0 0 chr18 26713668 26713698 -59275236 + (TATATG)n Simple_repeat Simple_repeat 5 34 0 300 70 0 0 chr18 26713716 26713759 -59275175 + (CA)n Simple_repeat Simple_repeat 2 44 0 891 282 131 29 chr18 26713765 26714766 -59274168 + L1M1 LINE L1 4369 5488 -2077 * 1036 285 117 21 chr18 26714761 26715193 -59273741 + L1M1 LINE L1 5913 6417 -1148 518 268 89 38 chr18 26715193 26715406 -59273528 - MER58A DNA MER1_type 0 224 1 1036 285 117 21 chr18 26715406 26715556 -59273378 + L1M1 LINE L1 6417 6551 -1014 1876 233 70 11 chr18 26715964 26716419 -59272515 - MLT1D LTR MaLR -2 503 22 1529 230 18 6 chr18 26716503 26716829 -59272105 - MSTD LTR MaLR 0 396 67 1258 167 0 45 chr18 26716831 26717052 -59271882 - AluJo SINE Alu -101 211 1 284 116 0 0 chr18 26717055 26717098 -59271836 - MSTD LTR MaLR -353 43 1 180 0 0 0 chr18 26717347 26717367 -59271567 + (TAAAAA)n Simple_repeat Simple_repeat 5 24 0 732 328 12 0 chr18 26718839 26719086 -59269848 + MIR SINE MIR 13 262 0 2279 134 68 12 chr18 26719544 26719953 -59268981 - MER57B LTR ERV1 -2 432 1 5113 193 33 64 chr18 26720134 26721774 -59267160 - L1MC1 LINE L1 0 6333 4776 1532 182 24 30 chr18 26721774 26722071 -59266863 - AluJo SINE Alu -17 295 1 5113 193 33 64 chr18 26722071 26722581 -59266353 - L1MC1 LINE L1 -1557 4776 4252 769 271 32 29 chr18 26724383 26724629 -59264305 - MER113 DNA MER1_type? -146 375 126 1500 158 107 25 chr18 26724629 26724946 -59263988 - MER61A LTR ERV1 0 343 1 769 271 32 29 chr18 26724946 26725039 -59263895 - MER113 DNA MER1_type? -395 126 35 2268 66 10 30 chr18 26725102 26725407 -59263527 - AluY SINE Alu -12 299 1 184 292 0 0 chr18 26725541 26725589 -59263345 + L2 LINE L2 3223 3270 -2 292 311 76 17 chr18 26726168 26726287 -59262647 - MIR SINE MIR -67 141 16 298 256 8 66 chr18 26726604 26726695 -59262239 - MIR SINE MIR 0 262 178 2339 93 3 10 chr18 26726695 26727007 -59261927 + AluSg SINE Alu 1 310 0 298 256 8 66 chr18 26727007 26727036 -59261898 - MIR SINE MIR -84 178 149 207 100 0 0 chr18 26728564 26728594 -59260340 + (T)n Simple_repeat Simple_repeat 1 30 0 603 333 118 22 chr18 26729017 26729541 -59259393 - L2 LINE L2 -1 3312 2746 23 0 0 0 chr18 26729741 26729764 -59259170 + AT_rich Low_complexity Low_complexity 1 23 0 249 363 11 0 chr18 26730169 26730260 -59258674 + L1MEd LINE L1 1390 1481 -5466 1929 131 11 0 chr18 26730414 26730718 -59258216 - AluSx SINE Alu 0 307 1 233 215 46 0 chr18 26730754 26730819 -59258115 + L1MEd LINE L1 1691 1758 -5202 236 298 110 26 chr18 26730847 26731119 -59257815 + L1MEd LINE L1 1790 2084 -4863 308 311 162 35 chr18 26731276 26731504 -59257430 + LTR33 LTR ERVL 235 491 -30 265 274 80 24 chr18 26731763 26731975 -59256959 + L1MEd LINE L1 2276 2499 -4639 2755 244 100 36 chr18 26732057 26732834 -59256100 + L1MEd LINE L1 4 830 -6029 2422 224 77 24 chr18 26732816 26733789 -59255145 + L1MEd LINE L1 3543 4567 -2390 * 4792 218 19 31 chr18 26733823 26735958 -59252976 + L1MB8 LINE L1 4326 6433 -5 220 120 40 0 chr18 26735958 26736008 -59252926 + (TA)n Simple_repeat Simple_repeat 1 52 0 1535 292 81 17 chr18 26736270 26737365 -59251569 + L1M4b LINE L1 2925 4046 -2911 23 68 0 0 chr18 26737484 26737528 -59251406 + AT_rich Low_complexity Low_complexity 1 44 0 1254 178 58 35 chr18 26737840 26738099 -59250835 - AluJo SINE Alu -13 299 35 2894 178 23 16 chr18 26738099 26738898 -59250036 - L1MB5 LINE L1 -313 5861 5058 414 239 27 17 chr18 26739121 26739259 -59249675 + L1ME LINE L1 5460 5600 -570 1230 237 89 11 chr18 26739331 26739778 -59249156 - L1MB5 LINE L1 -1199 4947 4466 732 224 58 0 chr18 26739791 26739947 -59248987 - MER20 DNA MER1_type -54 165 1 236 314 46 46 chr18 26740165 26740340 -59248594 + L1ME LINE L1 200 374 -5696 288 119 0 102 chr18 26740344 26740403 -59248531 + MLT1B LTR MaLR 4 56 -334 36 40 0 0 chr18 26741028 26741078 -59247856 + AT_rich Low_complexity Low_complexity 1 50 0 363 121 0 0 chr18 26741674 26741732 -59247202 + (CA)n Simple_repeat Simple_repeat 2 59 0 232 105 53 18 chr18 26741742 26741799 -59247135 + (TA)n Simple_repeat Simple_repeat 1 59 0 273 315 14 0 chr18 26742044 26742117 -59246817 - MIR SINE MIR -83 125 52 734 284 19 23 chr18 26742149 26742364 -59246570 + MIR SINE MIR 10 223 -39 1756 184 13 3 chr18 26744410 26744747 -59244187 - AluJb SINE Alu 0 340 1 212 290 101 72 chr18 26745248 26745386 -59243548 - L2 LINE L2 -220 3052 2911 3637 85 12 4 chr18 26745386 26745893 -59243041 + L1PA10 LINE L1 5658 6168 0 261 366 15 0 chr18 26745963 26746094 -59242840 - MIR SINE MIR -113 149 17 311 95 0 0 chr18 26746932 26746974 -59241960 - LTR5 LTR ERVK -815 154 113 2663 10 0 10 chr18 26746974 26747309 -59241625 + SVA Other Other 1089 1386 0 22 0 0 0 chr18 26748464 26748486 -59240448 + AT_rich Low_complexity Low_complexity 1 22 0 2124 94 3 17 chr18 26748493 26748815 -59240119 + AluSx SINE Alu 1 318 0 784 199 66 0 chr18 26749715 26749911 -59239023 + MER33 DNA MER1_type 10 218 -106 1824 111 70 4 chr18 26749927 26750198 -59238736 - AluSg SINE Alu -21 289 1 380 169 0 0 chr18 26750334 26750399 -59238535 + MER33 DNA MER1_type 297 361 -2 437 248 66 8 chr18 26750418 26750539 -59238395 + MER5A DNA MER1_type 10 137 -52 770 297 14 28 chr18 26752235 26752598 -59236336 - L2 LINE L2 -213 3100 2743 1006 243 118 29 chr18 26752682 26752938 -59235996 + L1ME3A LINE L1 5361 5593 -577 758 225 14 50 chr18 26752938 26753156 -59235778 + MER58C DNA MER1_type 4 213 -2 1006 243 118 29 chr18 26753156 26753345 -59235589 + L1ME3A LINE L1 5593 6013 -157 948 275 99 47 chr18 26753742 26754543 -59234391 + L2 LINE L2 2475 3313 0 22 80 0 0 chr18 26754728 26754778 -59234156 + AT_rich Low_complexity Low_complexity 1 50 0 39 68 0 0 chr18 26755828 26755902 -59233032 + AT_rich Low_complexity Low_complexity 1 74 0 25 0 0 0 chr18 26755977 26756002 -59232932 + AT_rich Low_complexity Low_complexity 1 25 0 709 270 11 0 chr18 26756107 26756281 -59232653 + MIR SINE MIR 86 261 -1 428 373 30 53 chr18 26756336 26756810 -59232124 - L3 LINE CR1 -725 852 390 315 313 30 0 chr18 26757454 26757553 -59231381 + MIR3 SINE MIR 83 184 -24 301 318 136 0 chr18 26758097 26758251 -59230683 + MIR SINE MIR 86 260 -2 1831 156 164 11 chr18 26759095 26759466 -59229468 - MSTA LTR MaLR 0 428 1 920 305 52 26 chr18 26759580 26760078 -59228856 - MLT1J LTR MaLR 0 511 1 741 250 25 20 chr18 26760513 26760757 -59228177 - L1MC4a LINE L1 -1940 5868 5624 516 258 78 37 chr18 26761302 26761519 -59227415 - HAL1b LINE L1 -847 501 276 196 318 0 64 chr18 26763138 26763248 -59225686 - L2 LINE L2 -563 2751 2649 780 332 45 11 chr18 26763853 26764227 -59224707 + LTR16C LTR ERVL 97 483 -8 224 337 74 11 chr18 26764357 26764452 -59224482 + L2 LINE L2 3172 3272 0 197 397 32 39 chr18 26764710 26764866 -59224068 - MIR SINE MIR -71 191 37 208 330 46 18 chr18 26765793 26765902 -59223032 + L2 LINE L2 3202 3313 0 322 328 94 8 chr18 26766267 26766395 -59222539 + MIR SINE MIR 12 150 -112 1312 323 120 26 chr18 26766477 26767263 -59221671 - L2 LINE L2 -272 3041 2188 26 50 0 0 chr18 26767682 26767722 -59221212 + AT_rich Low_complexity Low_complexity 1 40 0 1518 319 191 22 chr18 26767839 26769158 -59219776 - L2 LINE L2 -1216 2098 557 206 329 0 37 chr18 26769211 26769293 -59219641 + MIR SINE MIR 153 231 -31 210 290 0 48 chr18 26769416 26769478 -59219456 - MIR3 SINE MIR -6 202 144 395 335 13 20 chr18 26769506 26769658 -59219276 - MER5B DNA MER1_type -27 151 1 311 234 266 0 chr18 26769658 26769761 -59219173 - MIR SINE MIR -54 154 30 184 240 0 60 chr18 26770188 26770238 -59218696 - MER5B DNA MER1_type -3 175 129 20695 158 27 31 chr18 26771988 26774241 -59214693 + L1MA4 LINE L1 24 2286 -5433 1966 145 0 16 chr18 26774241 26774544 -59214390 + AluSx SINE Alu 9 306 -6 20695 158 27 31 chr18 26774544 26779744 -59209190 + L1MA4 LINE L1 2286 7461 -258 1783 109 0 48 chr18 26779866 26780179 -59208755 + L1MA2 LINE L1 6007 6304 0 250 262 201 31 chr18 26780280 26780432 -59208502 + MER5B DNA MER1_type 9 172 -6 300 155 0 0 chr18 26780463 26780521 -59208413 - L1MA9 LINE L1 -38 6274 6217 42681 35 21 2 chr18 26780762 26786824 -59202110 + L1PA2 LINE L1 1 6155 0 2519 234 33 56 chr18 26787046 26787589 -59201345 - L1ME1 LINE L1 -4 6162 5608 4451 155 41 1 chr18 26787589 26788338 -59200596 + LTR39 LTR ERV1 3 781 -2 2519 234 33 56 chr18 26788338 26788545 -59200389 - L1ME1 LINE L1 -558 5608 5398 2270 87 10 0 chr18 26788545 26788834 -59200100 + AluSg SINE Alu 1 292 -18 2519 234 33 56 chr18 26788834 26789394 -59199540 - L1ME1 LINE L1 -768 5398 4896 1466 153 36 140 chr18 26789404 26789688 -59199246 + LTR23 LTR ERV1 1 248 -219 2012 91 42 0 chr18 26789688 26789953 -59198981 - AluSp SINE Alu -37 276 1 1466 153 36 140 chr18 26789953 26790153 -59198781 + LTR23 LTR ERV1 248 467 0 2722 249 47 35 chr18 26790179 26790514 -59198420 - L1ME1 LINE L1 -1260 4886 4556 2271 103 0 0 chr18 26790514 26790805 -59198129 - AluSc SINE Alu -16 293 3 2722 249 47 35 chr18 26790805 26791493 -59197441 - L1ME1 LINE L1 -1590 4556 3851 307 225 133 42 chr18 26791491 26791731 -59197203 - L1ME4a LINE L1 -85 6036 5775 * 31 44 0 0 chr18 26791731 26791776 -59197158 + AT_rich Low_complexity Low_complexity 1 45 0 507 267 120 60 chr18 26791781 26791998 -59196936 - MIR SINE MIR -32 230 1 306 333 11 62 chr18 26792046 26792223 -59196711 - L1ME4a LINE L1 -404 5717 5550 3738 160 24 21 chr18 26792765 26793272 -59195662 - L1MA9 LINE L1 -5 6307 5796 444 19 0 0 chr18 26793272 26793325 -59195609 + (CA)n Simple_repeat Simple_repeat 1 53 0 3738 160 24 21 chr18 26793325 26793565 -59195369 - L1MA9 LINE L1 -516 5796 5558 443 239 227 25 chr18 26793679 26793842 -59195092 + MIR SINE MIR 48 243 -19 23 0 0 0 chr18 26794069 26794092 -59194842 + AT_rich Low_complexity Low_complexity 1 23 0 4675 188 14 8 chr18 26794370 26795135 -59193799 - L1PB4 LINE L1 0 6156 5397 2182 100 34 0 chr18 26795135 26795426 -59193508 - AluSp SINE Alu -12 301 1 4675 188 14 8 chr18 26795426 26795641 -59193293 - L1PB4 LINE L1 -759 5397 5185 1956 127 72 20 chr18 26795641 26795987 -59192947 - THE1B LTR MaLR 0 364 1 4675 188 14 8 chr18 26795987 26796650 -59192284 - L1PB4 LINE L1 -971 5185 4503 23 68 0 0 chr18 26796997 26797041 -59191893 + AT_rich Low_complexity Low_complexity 1 44 0 187 296 148 19 chr18 26797751 26797859 -59191075 - L2 LINE L2 -11 3302 3181 273 321 36 0 chr18 26798130 26798242 -59190692 - MIR SINE MIR -46 216 101 391 329 88 33 chr18 26798404 26798644 -59190290 + MIR SINE MIR 2 254 -8 201 133 0 0 chr18 26799387 26799417 -59189517 + (TG)n Simple_repeat Simple_repeat 2 31 0 443 297 39 0 chr18 26799711 26799839 -59189095 - MIR3 SINE MIR -22 186 54 260 269 93 60 chr18 26800283 26800465 -59188469 + L2 LINE L2 3126 3313 0 697 338 105 0 chr18 26801213 26801527 -59187407 + MLT1I LTR MaLR 63 409 0 2128 130 36 30 chr18 26801700 26802062 -59186872 + THE1B LTR MaLR 1 364 0 7770 24 1 1 chr18 26802088 26803678 -59185256 + L1PA3 LINE L1 4565 6155 0 221 171 0 0 chr18 26803685 26803726 -59185208 + A-rich Low_complexity Low_complexity 1 41 0 569 290 68 6 chr18 26803854 26804001 -59184933 + L2 LINE L2 2361 2522 -792 2385 75 7 0 chr18 26804001 26804308 -59184626 - AluY SINE Alu -2 309 1 569 290 68 6 chr18 26804308 26804336 -59184598 + L2 LINE L2 2522 2547 -767 2031 139 0 19 chr18 26804434 26804744 -59184190 + AluSx SINE Alu 1 304 -8 331 221 24 79 chr18 26805949 26806076 -59182858 + HAL1b LINE L1 485 604 -744 210 37 0 0 chr18 26806479 26806506 -59182428 + (CA)n Simple_repeat Simple_repeat 2 28 0 1412 313 45 25 chr18 26806530 26807756 -59181178 + L1M4 LINE L1 4028 5278 -868 1834 190 24 0 chr18 26807852 26808189 -59180745 + MER70A LTR ERVL 128 472 0 1937 275 67 51 chr18 26808196 26809304 -59179630 + L1MC3 LINE L1 6633 8031 -11 954 271 115 48 chr18 26809389 26810113 -59178821 + L2 LINE L2 2529 3286 -27 232 266 0 0 chr18 26810781 26810845 -59178089 + T-rich Low_complexity Low_complexity 1 64 0 332 339 58 8 chr18 26811867 26811988 -59176946 - L2 LINE L2 -8 3264 3138 217 200 36 18 chr18 26812421 26812476 -59176458 + CT-rich Low_complexity Low_complexity 1 56 0 324 0 0 0 chr18 26812479 26812515 -59176419 + (CA)n Simple_repeat Simple_repeat 2 37 0 207 301 233 0 chr18 26814077 26814210 -59174724 - MIR SINE MIR -15 247 84 594 310 54 0 chr18 26814971 26815155 -59173779 - MIR SINE MIR -10 252 59 307 368 61 0 chr18 26816390 26816504 -59172430 - MIR SINE MIR -70 138 18 3089 174 35 19 chr18 26816695 26817326 -59171608 + L1MB1 LINE L1 5527 6167 -1 243 250 0 0 chr18 26817599 26817667 -59171267 + GA-rich Low_complexity Low_complexity 4 71 0 230 172 17 17 chr18 26818336 26818394 -59170540 + MER94 DNA DNA 60 117 -17 476 283 147 88 chr18 26819511 26819988 -59168946 - L2 LINE L2 0 3313 2809 2410 185 27 12 chr18 26820015 26820502 -59168432 + MLT1D LTR MaLR 10 503 -2 334 179 12 48 chr18 26820503 26820587 -59168347 - L2 LINE L2 -570 2744 2664 220 235 20 0 chr18 26820593 26820644 -59168290 + L2 LINE L2 2661 2712 -602 211 364 70 0 chr18 26820661 26820790 -59168144 - L2 LINE L2 -659 2655 2518 824 212 48 0 chr18 26820849 26821038 -59167896 - MER3 DNA MER1_type -10 199 2 316 214 45 62 chr18 26821053 26821165 -59167769 - L2 LINE L2 -1148 2166 2057 199 355 136 0 chr18 26822150 26822260 -59166674 - L2 LINE L2 -3 3310 3186 1995 127 0 0 chr18 26822331 26822606 -59166328 - AluSg SINE Alu -10 300 26 1637 181 3 22 chr18 26822606 26822921 -59166013 - AluJo SINE Alu -3 309 1 1040 170 38 69 chr18 26823506 26823794 -59165140 + L1MC3 LINE L1 6819 7097 -688 278 315 0 0 chr18 26823794 26823883 -59165051 + MLT1F1 LTR MaLR 35 123 -444 602 181 9 0 chr18 26823892 26823997 -59164937 + L1MC3 LINE L1 7195 7300 -485 1816 169 3 10 chr18 26823997 26824305 -59164629 - AluJb SINE Alu -6 306 1 316 241 0 58 chr18 26824341 26824428 -59164506 - AluJ/FRAM SINE Alu 0 302 221 1456 198 0 0 chr18 26824428 26824670 -59164264 - AluJo SINE Alu -65 247 6 2234 161 37 26 chr18 26824676 26824759 -59164175 + L1MC3 LINE L1 7288 7369 -416 303 28 0 0 chr18 26824759 26824795 -59164139 + (CA)n Simple_repeat Simple_repeat 1 36 0 2234 161 37 26 chr18 26824795 26825140 -59163794 + L1MC3 LINE L1 7369 7721 -64 8273 118 15 12 chr18 26825649 26826718 -59162216 + HSMAR2 DNA Mariner 2 1077 -225 1929 140 14 0 chr18 26826718 26827057 -59161877 + AluSx SINE Alu 1 343 0 8273 118 15 12 chr18 26827057 26827284 -59161650 + HSMAR2 DNA Mariner 1077 1302 0 527 276 158 49 chr18 26827418 26827910 -59161024 - MLT1H LTR MaLR -3 546 1 256 296 9 123 chr18 26829097 26829317 -59159617 + L2 LINE L2 2967 3161 -111 236 282 0 97 chr18 26829808 26829911 -59159023 + MIR SINE MIR 88 180 -82 324 0 0 0 chr18 26832345 26832381 -59156553 + (TG)n Simple_repeat Simple_repeat 2 37 0 1594 206 61 44 chr18 26832978 26833434 -59155500 - MER31B LTR ERV1 -2 464 1 542 324 66 59 chr18 26833634 26834091 -59154843 + L2 LINE L2 2421 2880 -434 415 354 20 15 chr18 26834241 26834436 -59154498 + L2 LINE L2 3118 3313 0 1949 74 8 16 chr18 26835490 26835746 -59153188 - AluY SINE Alu -19 292 39 251 363 44 18 chr18 26835923 26836036 -59152898 - L3 LINE CR1 -437 1140 1025 1756 68 0 0 chr18 26837631 26837837 -59151097 + AluY SINE Alu 84 289 -22 1029 82 0 0 chr18 26837864 26837998 -59150936 + AluSp/q SINE Alu 173 306 -7 342 67 0 0 chr18 26838133 26838178 -59150756 + (TG)n Simple_repeat Simple_repeat 2 46 0 186 143 0 0 chr18 26839598 26839633 -59149301 + (TGGGGG)n Simple_repeat Simple_repeat 2 36 0 313 251 62 31 chr18 26839745 26839972 -59148962 + L1M2 LINE L1 7 240 -6609 * 1171 229 34 34 chr18 26839965 26840006 -59148928 + L1M2 LINE L1 1577 1617 -5232 5035 80 36 1 chr18 26840006 26840671 -59148263 - LTR12 LTR ERV1 0 688 1 1171 229 34 34 chr18 26840671 26841065 -59147869 + L1M2 LINE L1 1616 2012 -4837 212 162 0 0 chr18 26841747 26841784 -59147150 + A-rich Low_complexity Low_complexity 2 38 0 913 201 0 0 chr18 26841944 26842098 -59146836 + FRAM SINE Alu 4 157 -19 240 59 0 0 chr18 26842146 26842180 -59146754 + (CA)n Simple_repeat Simple_repeat 1 34 0 202 336 67 10 chr18 26842251 26842355 -59146579 - MIR SINE MIR -101 161 52 522 322 89 78 chr18 26842688 26843147 -59145787 - L2 LINE L2 0 3272 2809 1400 186 27 24 chr18 26843165 26843460 -59145474 - MLT1A1 LTR MaLR -69 296 1 2297 89 0 20 chr18 26843639 26843943 -59144991 - AluSx SINE Alu -14 298 1 258 294 93 53 chr18 26844071 26844621 -59144313 - L1M4 LINE L1 -2392 3754 3183 201 121 0 0 chr18 26844634 26844667 -59144267 + (TG)n Simple_repeat Simple_repeat 2 34 0 443 245 19 0 chr18 26844730 26844836 -59144098 - L2 LINE L2 -973 2341 2234 1801 242 80 133 chr18 26844847 26845368 -59143566 - MLT1G LTR MaLR 0 590 112 2163 131 0 0 chr18 26845368 26845674 -59143260 - AluSq SINE Alu -7 306 1 1801 242 80 133 chr18 26845674 26845781 -59143153 - MLT1G LTR MaLR -478 112 1 478 243 118 83 chr18 26845843 26846012 -59142922 - MER5A DNA MER1_type -1 188 14 1934 141 6 6 chr18 26846808 26847120 -59141814 + AluSx SINE Alu 1 312 0 2094 99 18 0 chr18 26847518 26847801 -59141133 + AluSp SINE Alu 1 288 -25 243 0 0 0 chr18 26847808 26847835 -59141099 + (TTAAA)n Simple_repeat Simple_repeat 4 30 0 203 200 0 0 chr18 26849330 26849365 -59139569 + A-rich Low_complexity Low_complexity 1 35 0 264 384 0 0 chr18 26849874 26850051 -59138883 + L1ME LINE L1 5536 5712 -409 658 260 205 16 chr18 26850150 26850408 -59138526 - L2 LINE L2 -3 3310 3004 227 301 205 15 chr18 26851587 26851809 -59137125 - L2 LINE L2 -301 3012 2761 3631 132 25 22 chr18 26851957 26852556 -59136378 + LTR26 LTR ERV1 3 603 0 207 0 0 0 chr18 26852772 26852795 -59136139 + (A)n Simple_repeat Simple_repeat 1 23 0 334 299 7 35 chr18 26852938 26853082 -59135852 - MER103 DNA DNA -19 147 8 266 258 16 0 chr18 26854379 26854441 -59134493 + MIR SINE MIR 64 126 -82 270 269 67 50 chr18 26854487 26854606 -59134328 + MIR SINE MIR 127 247 -15 312 333 211 4 chr18 26854673 26854910 -59134024 - L1ME LINE L1 -375 5746 5461 28 71 0 0 chr18 26854910 26854966 -59133968 + AT_rich Low_complexity Low_complexity 1 56 0 304 296 65 112 chr18 26854999 26855401 -59133533 - L1ME LINE L1 -818 5328 4946 2258 86 0 13 chr18 26855831 26856133 -59132801 - AluY SINE Alu -13 298 1 3360 80 18 0 chr18 26856376 26856826 -59132108 + LTR22A LTR ERVK 1 458 0 476 179 47 160 chr18 26857965 26858284 -59130650 - Charlie2a DNA MER1_type -1847 1015 733 * 524 318 155 17 chr18 26858282 26858694 -59130240 - Charlie2a DNA MER1_type -2388 474 6 185 279 109 41 chr18 26858757 26858904 -59130030 - L2 LINE L2 -1061 2253 2097 263 281 0 0 chr18 26859036 26859093 -59129841 + MLT1K LTR MaLR 132 188 -400 1989 183 89 5 chr18 26859574 26859967 -59128967 + MSTB LTR MaLR 1 426 0 210 273 18 0 chr18 26860016 26860071 -59128863 + (TATG)n Simple_repeat Simple_repeat 2 57 0 25 56 0 42 chr18 26860097 26860169 -59128765 + AT_rich Low_complexity Low_complexity 1 69 0 467 340 102 25 chr18 26861309 26861624 -59127310 - L1ME3A LINE L1 -286 5884 5546 250 274 62 22 chr18 26861691 26861870 -59127064 - L1M2 LINE L1 -703 5448 5263 312 290 108 17 chr18 26861903 26862079 -59126855 - L1ME3A LINE L1 -919 5227 5036 2037 146 0 7 chr18 26862640 26862948 -59125986 + AluSx SINE Alu 1 306 -6 667 251 74 17 chr18 26863069 26863244 -59125690 - MIR3 SINE MIR -13 195 11 281 328 107 53 chr18 26864696 26865318 -59123616 + L2 LINE L2 2689 3267 -5 703 286 89 0 chr18 26868365 26868589 -59120345 + MIR SINE MIR 15 258 -4 297 75 0 0 chr18 26869164 26869204 -59119730 + (CA)n Simple_repeat Simple_repeat 1 40 0 254 313 96 54 chr18 26869279 26869445 -59119489 - MIR3 SINE MIR -33 175 3 243 0 0 0 chr18 26870231 26870258 -59118676 + (CA)n Simple_repeat Simple_repeat 2 28 0 681 315 118 14 chr18 26871343 26871699 -59117235 - MLT1J2 LTR MaLR -37 413 21 784 277 44 0 chr18 26871763 26871969 -59116965 + MER58C DNA MER1_type 1 215 0 1122 253 64 0 chr18 26872042 26872338 -59116596 - MLT1E LTR MaLR 0 593 279 1182 172 10 0 chr18 26872343 26872547 -59116387 + MLT2B1 LTR ERVL 1 206 -314 389 188 0 10 chr18 26872563 26872659 -59116275 + (TG)n Simple_repeat Simple_repeat 2 96 0 644 167 117 0 chr18 26872740 26872860 -59116074 - MLT1E LTR MaLR -459 134 1 915 280 100 18 chr18 26872860 26873260 -59115674 - LTR33 LTR ERVL -72 449 17 374 356 112 48 chr18 26875383 26875714 -59113220 + L2 LINE L2 2921 3272 0 597 261 43 21 chr18 26876392 26876580 -59112354 + MIR SINE MIR 1 192 -70 1830 169 65 37 chr18 26877035 26877390 -59111544 - MLT1A1 LTR MaLR 0 365 1 1583 188 0 52 chr18 26877616 26877998 -59110936 + AluJb SINE Alu 1 365 0 203 278 113 52 chr18 26878047 26878162 -59110772 + MIR SINE MIR 78 199 -63 288 246 60 66 chr18 26878563 26878730 -59110204 - L1 LINE L1 -2335 3811 3646 2137 124 7 0 chr18 26879295 26879602 -59109332 + AluSx SINE Alu 1 309 -3 2915 295 161 12 chr18 26879805 26881509 -59107425 - L2 LINE L2 -1 3312 1339 182 200 0 0 chr18 26881757 26881787 -59107147 - L2 LINE L2 -107 3165 3136 203 338 47 74 chr18 26882291 26882590 -59106344 - L2 LINE L2 -626 2688 2398 6110 63 3 54 chr18 26883364 26884237 -59104697 + L1PA8 LINE L1 5333 6161 -11 370 257 62 106 chr18 26884545 26884660 -59104274 - MIR SINE MIR -40 222 120 2314 103 0 0 chr18 26884660 26884961 -59103973 + AluSq SINE Alu 1 301 -12 370 257 62 106 chr18 26884961 26885071 -59103863 - MIR SINE MIR -142 120 7 24 85 0 0 chr18 26885220 26885279 -59103655 + AT_rich Low_complexity Low_complexity 1 59 0 1064 88 27 0 chr18 26885876 26886023 -59102911 - L1PA8 LINE L1 -3 6169 6019 1998 172 27 5 chr18 26886229 26886592 -59102342 - MER57A LTR ERV1 0 403 33 1553 197 65 9 chr18 26886592 26886917 -59102017 + MER61A LTR ERV1 1 343 0 283 57 0 0 chr18 26886917 26886952 -59101982 - MER57A LTR ERV1 -368 35 1 * 3466 127 2 25 chr18 26886952 26887500 -59101434 - MER34B LTR ERV1 -30 535 1 200 133 0 44 chr18 26888481 26888526 -59100408 + (CAAAG)n Simple_repeat Simple_repeat 2 44 0 192 97 0 0 chr18 26888829 26888860 -59100074 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 247 293 0 0 chr18 26889990 26890048 -59098886 + L2 LINE L2 3256 3313 0 616 264 137 24 chr18 26890257 26890469 -59098465 + MIR SINE MIR 2 237 -25 271 273 15 0 chr18 26890800 26890866 -59098068 - MIR SINE MIR 0 262 196 1156 205 10 24 chr18 26893952 26894245 -59094689 + L1MB7 LINE L1 4168 4456 -1690 1580 209 8 32 chr18 26894252 26894621 -59094313 + L1MB7 LINE L1 4750 5109 -1037 3729 182 59 32 chr18 26894646 26894719 -59094215 + L1MB7 LINE L1 5258 5328 -856 1671 157 26 43 chr18 26894719 26895024 -59093910 + AluJb SINE Alu 1 300 -12 3729 182 59 32 chr18 26895024 26895796 -59093138 + L1MB7 LINE L1 5328 6126 -58 1777 149 0 4 chr18 26895801 26896070 -59092864 + AluJo SINE Alu 6 273 -39 247 149 43 0 chr18 26896103 26896150 -59092784 + L1MB8 LINE L1 6115 6163 -15 196 389 56 9 chr18 26896607 26896715 -59092219 + MER5A DNA MER1_type 77 189 0 2257 144 59 24 chr18 26896800 26897209 -59091725 + MSTC LTR MaLR 1 423 -5 1020 260 117 25 chr18 26897244 26897679 -59091255 - L1MC4 LINE L1 -89 7953 7479 491 216 56 0 chr18 26897708 26897833 -59091101 - L1MC4 LINE L1 -641 7401 7270 331 315 63 9 chr18 26899219 26899330 -59089604 - L2 LINE L2 -13 3259 3143 556 329 200 10 chr18 26900766 26901460 -59087474 + L2 LINE L2 1567 2392 -922 194 320 80 13 chr18 26901545 26901620 -59087314 + L2 LINE L2 3148 3227 -45 428 333 81 36 chr18 26902337 26902694 -59086240 - L2 LINE L2 -344 2970 2598 206 128 26 0 chr18 26902835 26902874 -59086060 + (TG)n Simple_repeat Simple_repeat 2 41 0 233 222 72 7 chr18 26902874 26903027 -59085907 + (TA)n Simple_repeat Simple_repeat 1 163 0 613 323 140 43 chr18 26903047 26904285 -59084649 - L2 LINE L2 -50 3222 1402 236 246 49 0 chr18 26904939 26905000 -59083934 - MLT1J LTR MaLR -443 68 5 3888 115 7 2 chr18 26905674 26906249 -59082685 + L1PA13 LINE L1 5585 6162 -1 199 240 0 20 chr18 26908987 26909037 -59079897 + L2 LINE L2 3261 3309 -4 29 70 0 0 chr18 26909549 26909606 -59079328 + AT_rich Low_complexity Low_complexity 1 57 0 211 178 68 0 chr18 26910503 26910576 -59078358 + (TA)n Simple_repeat Simple_repeat 1 78 0 22 0 0 0 chr18 26910902 26910924 -59078010 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr18 26911010 26911047 -59077887 + AT_rich Low_complexity Low_complexity 1 37 0 2729 105 21 2 chr18 26911296 26911714 -59077220 + L1PA11 LINE L1 5748 6173 -1 340 294 10 0 chr18 26913015 26913117 -59075817 - L1ME3A LINE L1 -39 6131 6029 785 234 11 43 chr18 26913140 26913328 -59075606 + MER5A DNA MER1_type 5 186 -3 1071 157 0 11 chr18 26913426 26913604 -59075330 + AluSg/x SINE Alu 137 312 0 285 295 49 0 chr18 26913609 26913731 -59075203 + L1ME4a LINE L1 5972 6099 -22 888 297 118 20 chr18 26914289 26914730 -59074204 + LTR16C LTR ERVL 3 486 -5 537 304 58 23 chr18 26916603 26916912 -59072022 - L1ME3A LINE L1 -272 5898 5579 24 0 0 0 chr18 26917028 26917052 -59071882 + AT_rich Low_complexity Low_complexity 1 24 0 276 297 81 40 chr18 26917323 26918049 -59070885 + L1MEc LINE L1 2186 2915 -3300 24 32 0 0 chr18 26918217 26918248 -59070686 + AT_rich Low_complexity Low_complexity 1 31 0 232 317 90 24 chr18 26918471 26918761 -59070173 + L1P5 LINE L1 5352 5660 -494 413 279 36 12 chr18 26918783 26918948 -59069986 + L1MC4a LINE L1 5750 5918 -1890 1047 186 10 21 chr18 26920383 26920576 -59068358 + MLT2B2 LTR ERVL 1 191 -324 1317 213 24 45 chr18 26920675 26920965 -59067969 + MLT2B1 LTR ERVL 195 479 -41 198 0 0 0 chr18 26920965 26920987 -59067947 + (TA)n Simple_repeat Simple_repeat 1 22 0 1317 213 24 45 chr18 26920987 26921029 -59067905 + MLT2B1 LTR ERVL 479 520 0 26 50 0 0 chr18 26921047 26921087 -59067847 + AT_rich Low_complexity Low_complexity 1 40 0 229 291 95 32 chr18 26921567 26921725 -59067209 - HAL1b LINE L1 -793 555 388 180 0 0 0 chr18 26923068 26923088 -59065846 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 182 83 56 0 chr18 26924056 26924092 -59064842 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 35 0 0 0 chr18 26924454 26924489 -59064445 + AT_rich Low_complexity Low_complexity 1 35 0 291 254 99 28 chr18 26926126 26926268 -59062666 + MER117 DNA MER1_type 6 157 -40 181 147 29 0 chr18 26926774 26926808 -59062126 + L2 LINE L2 3277 3311 -2 328 299 11 0 chr18 26926935 26927022 -59061912 + MIR SINE MIR 63 150 -112 236 356 23 30 chr18 26930650 26930782 -59058152 - L3 LINE CR1 -98 1479 1349 191 300 44 33 chr18 26930802 26930892 -59058042 - MER5B DNA MER1_type -1 177 87 1177 242 54 67 chr18 26930892 26931338 -59057596 - MER39 LTR ERV1 0 707 268 238 264 264 0 chr18 26931323 26931414 -59057520 - MER34 LTR ERV1 -423 119 5 * 248 320 13 13 chr18 26931420 26931498 -59057436 - MER5B DNA MER1_type -89 89 12 387 311 16 55 chr18 26931500 26931683 -59057251 + MER5B DNA MER1_type 2 177 -1 290 190 35 0 chr18 26932074 26932132 -59056802 - MER39 LTR ERV1 -112 595 536 258 164 0 0 chr18 26932849 26932904 -59056030 + GA-rich Low_complexity Low_complexity 2 56 0 370 299 128 16 chr18 26933510 26933697 -59055237 - MIR SINE MIR -9 253 46 2282 111 36 30 chr18 26934174 26934536 -59054398 - THE1B LTR MaLR 0 364 1 364 161 62 12 chr18 26934536 26934617 -59054317 + MER53 DNA DNA 4 88 -101 * 420 114 23 199 chr18 26934615 26934791 -59054143 + MER53 DNA DNA 42 186 -3 255 253 0 58 chr18 26935074 26935161 -59053773 - L2 LINE L2 0 3313 3232 23 54 0 0 chr18 26935469 26935506 -59053428 + AT_rich Low_complexity Low_complexity 1 37 0 2206 104 13 10 chr18 26935568 26935877 -59053057 - AluSx SINE Alu -1 311 2 1952 134 0 11 chr18 26938150 26938434 -59050500 + AluSx SINE Alu 1 281 -31 204 40 0 0 chr18 26939462 26939487 -59049447 + (GA)n Simple_repeat Simple_repeat 2 26 0 210 171 13 53 chr18 26941115 26941191 -59047743 + (TATATG)n Simple_repeat Simple_repeat 3 75 0 229 146 18 18 chr18 26941200 26941255 -59047679 - LTR66 LTR ERVL -173 437 383 243 0 0 0 chr18 26941261 26941288 -59047646 + (TG)n Simple_repeat Simple_repeat 2 28 0 2316 105 0 0 chr18 26941941 26942246 -59046688 - AluSq SINE Alu -8 305 1 391 266 28 79 chr18 26942679 26942893 -59046041 - MLT1J1 LTR MaLR -1 445 243 5729 95 256 92 chr18 26943711 26945169 -59043765 - pTR5 LTR ERV1 0 2438 741 1776 265 28 8 chr18 26946471 26946943 -59041991 - MER41E LTR ERV1 -11 501 21 262 164 15 30 chr18 26947052 26947119 -59041815 - MER41E LTR ERV1 -221 291 226 407 315 47 27 chr18 26947909 26948058 -59040876 - MIR3 SINE MIR -21 187 36 228 387 68 8 chr18 26950099 26950334 -59038600 - MIR SINE MIR -11 251 3 199 333 0 0 chr18 26950406 26950466 -59038468 + MIR SINE MIR 58 117 -145 215 233 96 14 chr18 26950557 26950630 -59038304 + MIR SINE MIR 172 250 -12 2481 191 66 39 chr18 26951121 26951743 -59037191 - L1MB8 LINE L1 -1 6177 5539 243 250 0 0 chr18 26952547 26952599 -59036335 - L2 LINE L2 -8 3305 3254 1042 270 42 26 chr18 26952629 26953010 -59035924 - MARNA DNA Mariner -199 387 1 2039 143 6 32 chr18 26953337 26953680 -59035254 - MER1B DNA MER1_type -1 336 3 1777 223 19 14 chr18 26953817 26954230 -59034704 - MLT1C LTR MaLR 0 467 53 2002 244 32 35 chr18 26954313 26954904 -59034030 - L1ME3A LINE L1 -89 6081 5493 383 153 90 84 chr18 26958581 26958716 -59030218 - L1ME LINE L1 -520 5601 5470 338 245 132 74 chr18 26958866 26959123 -59029811 + L1MC5 LINE L1 7292 7563 -398 2113 287 97 36 chr18 26959259 26959947 -59028987 - L1ME LINE L1 -1222 4924 4279 404 0 39 0 chr18 26959947 26959998 -59028936 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 2113 287 97 36 chr18 26959998 26960774 -59028160 - L1ME LINE L1 -1867 4279 3371 2192 121 3 0 chr18 26961686 26961993 -59026941 - AluSp SINE Alu -5 308 1 22 0 0 0 chr18 26962524 26962546 -59026388 + AT_rich Low_complexity Low_complexity 1 22 0 2101 135 0 7 chr18 26962620 26962916 -59026018 - AluSx SINE Alu -13 299 6 205 312 129 29 chr18 26963115 26963285 -59025649 - MIR SINE MIR -45 217 31 273 303 61 10 chr18 26963715 26963814 -59025120 + L2 LINE L2 3169 3272 0 574 213 35 21 chr18 26963819 26963960 -59024974 + Charlie1 DNA MER1_type 1 143 -2618 5288 124 37 2 chr18 26963964 26964784 -59024150 - L1PA15 LINE L1 -5 6160 5313 213 94 0 0 chr18 26964785 26964817 -59024117 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1517 108 18 5 chr18 26964833 26965055 -59023879 - MER30 DNA MER1_type 0 230 6 5760 187 7 3 chr18 26965077 26966124 -59022810 - L1PA15 LINE L1 -876 5270 4216 4351 107 12 17 chr18 26966124 26966771 -59022163 + LTR9B LTR ERV1 1 644 0 5760 187 7 3 chr18 26966771 26966854 -59022080 - L1PA15 LINE L1 -1930 4216 4135 349 195 92 46 chr18 26966861 26966948 -59021986 + Charlie1 DNA MER1_type 137 227 -2534 * 453 199 14 71 chr18 26966943 26967084 -59021850 + Charlie1 DNA MER1_type 2621 2753 -8 194 0 39 0 chr18 26967346 26967372 -59021562 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 24 32 0 0 chr18 26967952 26967983 -59020951 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr18 26968599 26968622 -59020312 + AT_rich Low_complexity Low_complexity 1 23 0 442 281 6 24 chr18 26968624 26968791 -59020143 - MER103 DNA DNA -1 165 2 3692 228 27 13 chr18 26971401 26972187 -59016747 - MER21B LTR ERV1 -24 839 43 217 132 0 0 chr18 26972333 26972371 -59016563 + (TA)n Simple_repeat Simple_repeat 2 39 0 288 277 92 23 chr18 26974598 26974728 -59014206 + L2 LINE L2 3175 3313 0 207 0 0 0 chr18 26975737 26975760 -59013174 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 197 314 0 29 chr18 26976195 26976265 -59012669 - L2 LINE L2 0 3272 3205 657 259 39 10 chr18 26976378 26976583 -59012351 - MIR SINE MIR -29 233 23 302 345 42 24 chr18 26976609 26976774 -59012160 + L1ME3A LINE L1 5231 5398 -748 284 378 59 3 chr18 26976777 26977084 -59011850 + L1ME3A LINE L1 5582 5905 -265 513 316 78 33 chr18 26977282 26977526 -59011408 - MIR SINE MIR 0 262 8 5355 141 8 13 chr18 26977545 26978438 -59010496 - L1PA16 LINE L1 -6 6160 5273 8519 228 42 23 chr18 26978440 26979556 -59009378 - L1PA16 LINE L1 -2082 4064 2971 1781 177 0 7 chr18 26979556 26979856 -59009078 + AluSg SINE Alu 1 298 -12 8519 228 42 23 chr18 26979856 26981081 -59007853 - L1PA16 LINE L1 -3175 2971 1678 274 345 76 7 chr18 26981366 26981511 -59007423 - MIR SINE MIR -11 251 97 21 0 0 0 chr18 26981890 26981911 -59007023 + AT_rich Low_complexity Low_complexity 1 21 0 691 266 80 21 chr18 26982233 26982470 -59006464 + MIR SINE MIR 2 252 -10 356 354 31 12 chr18 26982502 26982663 -59006271 - MIR3 SINE MIR -25 183 20 213 224 10 0 chr18 26984697 26984758 -59004176 + A-rich Low_complexity Low_complexity 1 61 0 2871 178 16 11 chr18 26985615 26986171 -59002763 + MER89 LTR ERV1 1 559 0 1788 135 13 53 chr18 26987406 26987578 -59001356 - AluJb SINE Alu -7 305 150 2160 136 0 0 chr18 26987578 26987879 -59001055 - AluSg SINE Alu -9 301 1 1788 135 13 53 chr18 26987879 26988024 -59000910 - AluJb SINE Alu -162 150 1 951 279 111 32 chr18 26988024 26988740 -59000194 - L2 LINE L2 -11 3302 2549 803 196 65 0 chr18 26989490 26989658 -58999276 + AluJo SINE Alu 121 299 -13 642 218 8 0 chr18 26990111 26990235 -58998699 + AluJb SINE Alu 137 261 -51 1044 198 16 5 chr18 26990261 26990448 -58998486 - MER5A DNA MER1_type 0 189 1 1067 202 55 105 chr18 26991867 26992022 -58996912 - MER39 LTR ERV1 -4 703 542 4320 24 0 0 chr18 26992022 26992527 -58996407 + L1PA4 LINE L1 5648 6152 -3 1067 202 55 105 chr18 26992527 26992753 -58996181 - MER39 LTR ERV1 -165 542 341 563 184 120 8 chr18 26992756 26992881 -58996053 - MER39 LTR ERV1 -568 139 1 212 227 0 0 chr18 26992977 26993021 -58995913 + MIR SINE MIR 219 262 0 31 76 0 0 chr18 26993113 26993179 -58995755 + AT_rich Low_complexity Low_complexity 1 66 0 2126 119 7 0 chr18 26993809 26994111 -58994823 - AluSg SINE Alu -6 304 1 21 0 0 0 chr18 26994118 26994139 -58994795 + AT_rich Low_complexity Low_complexity 1 21 0 248 293 228 8 chr18 26994310 26994433 -58994501 - L3 LINE CR1 -28 1549 1400 2148 109 0 0 chr18 26996114 26996432 -58992502 - AluSq SINE Alu 0 318 1 1268 205 58 53 chr18 26997381 26997723 -58991211 + MER2 DNA MER2_type 1 344 0 245 189 113 0 chr18 26997882 26997935 -58990999 + MIR SINE MIR 91 149 -59 207 167 0 0 chr18 26998045 26998087 -58990847 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 322 234 21 64 chr18 26998254 26998348 -58990586 + L1MC4 LINE L1 6615 6704 -1338 1720 142 16 10 chr18 26998884 26999195 -58989739 - L1MA5A LINE L1 -2 6295 5983 349 281 82 82 chr18 26999197 26999433 -58989501 + L1M2c LINE L1 998 1266 -5523 333 277 20 10 chr18 26999448 26999549 -58989385 - L1MEd LINE L1 -4973 1146 1045 698 210 8 0 chr18 26999739 26999863 -58989071 - FLAM_A SINE Alu -8 125 1 300 295 38 0 chr18 27000207 27000312 -58988622 + HAL1 LINE L1 1495 1603 -904 3471 90 20 0 chr18 27000902 27001392 -58987542 - L1PA13 LINE L1 -5 6158 5659 453 269 208 40 chr18 27002094 27002469 -58986465 + L1M2c LINE L1 2826 3263 -3525 24 32 0 0 chr18 27002469 27002500 -58986434 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr18 27002615 27002643 -58986291 + AT_rich Low_complexity Low_complexity 1 28 0 273 233 0 22 chr18 27002704 27002794 -58986140 + L1MC4a LINE L1 5255 5342 -2466 587 252 0 9 chr18 27002991 27003106 -58985828 + MER81 DNA DNA 1 114 0 749 173 0 0 chr18 27003239 27003366 -58985568 - LTR54 LTR ERV1 -61 449 323 2355 176 23 59 chr18 27003431 27003960 -58984974 + LTR54 LTR ERV1 1 510 0 22 35 0 0 chr18 27004918 27004947 -58983987 + AT_rich Low_complexity Low_complexity 1 29 0 314 305 39 13 chr18 27005269 27005423 -58983511 + HAL1b LINE L1 256 413 -935 235 326 31 0 chr18 27005555 27005653 -58983281 + LTR50 LTR ERVL 490 590 -205 2226 93 3 23 chr18 27005740 27006050 -58982884 - AluSc SINE Alu -5 304 1 824 306 82 18 chr18 27006063 27006406 -58982528 + L1MC4a LINE L1 6559 6923 -885 1278 246 62 31 chr18 27006518 27006872 -58982062 + MLT1A1 LTR MaLR 1 365 0 25389 59 11 6 chr18 27007100 27012411 -58976523 + L1PA3 LINE L1 982 6337 0 221 171 0 0 chr18 27012418 27012459 -58976475 + A-rich Low_complexity Low_complexity 1 41 0 569 290 68 6 chr18 27012587 27012734 -58976200 + L2 LINE L2 2361 2522 -792 2385 75 7 0 chr18 27012734 27013041 -58975893 - AluY SINE Alu -2 309 1 569 290 68 6 chr18 27013041 27013069 -58975865 + L2 LINE L2 2522 2547 -767 2088 139 0 13 chr18 27013167 27013477 -58975457 + AluSx SINE Alu 1 306 -6 2222 105 3 0 chr18 27064169 27064464 -58924470 - AluSp SINE Alu -17 296 1 180 111 0 0 chr18 27064710 27064737 -58924197 + (CA)n Simple_repeat Simple_repeat 1 27 0 390 21 0 0 chr18 27066117 27066164 -58922770 + (TG)n Simple_repeat Simple_repeat 2 48 0 2312 146 20 77 chr18 27067759 27068254 -58920680 - MLT1C LTR MaLR 0 467 1 22 0 0 0 chr18 27068277 27068299 -58920635 + AT_rich Low_complexity Low_complexity 1 22 0 526 307 102 11 chr18 27068578 27068852 -58920082 - L3b LINE CR1 -181 1402 1104 2280 114 0 0 chr18 27069089 27069396 -58919538 - AluSc SINE Alu -2 307 1 2053 159 38 31 chr18 27069571 27070118 -58918816 - MLT2A2 LTR ERVL 0 554 1 1494 182 28 47 chr18 27070573 27070891 -58918043 - AluJo SINE Alu 0 312 1 240 35 0 0 chr18 27071052 27071081 -58917853 + (ATG)n Simple_repeat Simple_repeat 2 30 0 480 280 81 22 chr18 27071088 27071272 -58917662 - MIR SINE MIR -13 249 51 204 154 0 26 chr18 27071754 27071793 -58917141 + CT-rich Low_complexity Low_complexity 1 38 0 698 232 113 0 chr18 27071876 27072044 -58916890 - MER58A DNA MER1_type -1 223 37 1001 137 50 12 chr18 27072112 27072273 -58916661 + THE1C LTR MaLR 1 167 -208 24833 41 42 2 chr18 27072289 27075433 -58913501 + L1P LINE L1 2 3271 -2875 284 354 82 31 chr18 27076197 27076392 -58912542 + L2 LINE L2 3063 3267 -5 3304 68 5 0 chr18 27076735 27077162 -58911772 - L1PA7 LINE L1 -1 6153 5725 359 245 71 0 chr18 27077636 27077734 -58911200 + MIR SINE MIR 75 179 -83 2177 102 32 0 chr18 27077842 27078127 -58910807 - AluSg SINE Alu -15 295 2 232 296 0 0 chr18 27078908 27078962 -58909972 - L2 LINE L2 -5 3267 3214 330 325 104 6 chr18 27080156 27080319 -58908615 + MIR3 SINE MIR 10 188 -20 439 167 56 11 chr18 27080375 27080465 -58908469 - MER67A LTR ERV1 0 543 450 756 229 36 61 chr18 27080493 27080868 -58908066 - MER67C LTR ERV1 -257 257 1 800 187 151 63 chr18 27081812 27082082 -58906852 - MER69 DNA AcHobo -1 2525 2219 2035 133 10 0 chr18 27082082 27082382 -58906552 - AluSx SINE Alu -9 303 1 800 187 151 63 chr18 27082382 27082443 -58906491 - MER69 DNA AcHobo -307 2219 2165 1214 209 63 4 chr18 27082451 27082719 -58906215 - MER58B DNA MER1_type -8 333 50 945 232 91 44 chr18 27082741 27083341 -58905593 - MER69 DNA AcHobo -349 2177 1478 951 297 22 7 chr18 27083343 27083612 -58905322 - MER69 DNA AcHobo -785 441 169 21 36 0 0 chr18 27085091 27085119 -58903815 + AT_rich Low_complexity Low_complexity 1 28 0 383 153 90 84 chr18 27089453 27089588 -58899346 - L1ME LINE L1 -520 5601 5470 1996 293 98 35 chr18 27089630 27090377 -58898557 - L1ME LINE L1 -1155 4991 4293 404 0 39 0 chr18 27090377 27090428 -58898506 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 1996 293 98 35 chr18 27090428 27091204 -58897730 - L1ME LINE L1 -1853 4293 3371 180 0 0 0 chr18 27094042 27094062 -58894872 + (ATG)n Simple_repeat Simple_repeat 1 20 0 225 233 0 133 chr18 27094123 27094213 -58894721 - MER5B DNA MER1_type -100 78 1 301 327 10 40 chr18 27094531 27094621 -58894313 - L2 LINE L2 -38 3234 3146 1281 190 87 35 chr18 27094621 27094968 -58893966 - MLT1A1 LTR MaLR 0 365 1 523 293 12 30 chr18 27095135 27095302 -58893632 - L2 LINE L2 -765 2549 2386 194 383 34 0 chr18 27095296 27095445 -58893489 - MIR SINE MIR -94 168 15 * 317 229 29 0 chr18 27096018 27096088 -58892846 - L2 LINE L2 -15 3257 3186 379 240 13 0 chr18 27096175 27096250 -58892684 + L2 LINE L2 3155 3230 -42 1378 137 44 4 chr18 27096358 27096585 -58892349 - AluJb SINE Alu -76 236 1 183 80 0 0 chr18 27096674 27096699 -58892235 + (TCCC)n Simple_repeat Simple_repeat 2 26 0 258 348 19 50 chr18 27098598 27098759 -58890175 - MER5B DNA MER1_type -22 156 1 285 327 10 0 chr18 27101586 27101690 -58887244 - MIR3 SINE MIR -6 202 98 391 368 22 0 chr18 27102636 27102772 -58886162 + L3 LINE CR1 406 544 -1033 547 336 157 14 chr18 27102813 27103259 -58885675 + L2 LINE L2 2804 3313 0 576 300 58 61 chr18 27103321 27103651 -58885283 + L3 LINE CR1 642 970 -607 272 362 0 21 chr18 27103833 27103927 -58885007 + L3 LINE CR1 1362 1453 -124 32 0 0 0 chr18 27104722 27104754 -58884180 + AT_rich Low_complexity Low_complexity 1 32 0 2192 121 3 0 chr18 27105573 27105880 -58883054 - AluSp SINE Alu -5 308 1 22 0 0 0 chr18 27106411 27106433 -58882501 + AT_rich Low_complexity Low_complexity 1 22 0 2093 136 0 7 chr18 27106507 27106802 -58882132 - AluSx SINE Alu -14 298 6 205 312 129 29 chr18 27107001 27107171 -58881763 - MIR SINE MIR -45 217 31 273 303 61 10 chr18 27107601 27107700 -58881234 + L2 LINE L2 3169 3272 0 574 213 35 21 chr18 27107705 27107846 -58881088 + Charlie1 DNA MER1_type 1 143 -2618 5261 125 37 2 chr18 27107850 27108667 -58880267 - L1PA15 LINE L1 -5 6160 5316 506 90 0 0 chr18 27108767 27108834 -58880100 - L1PA10 LINE L1 -291 5877 5811 1768 118 62 14 chr18 27108916 27109204 -58879730 - AluSq SINE Alu -11 302 1 29 0 0 0 chr18 27109253 27109282 -58879652 + AT_rich Low_complexity Low_complexity 1 29 0 488 316 41 15 chr18 27109438 27109634 -58879300 + MIR SINE MIR 33 233 -29 214 183 70 42 chr18 27109676 27109747 -58879187 + MIR SINE MIR 75 147 -115 286 250 42 31 chr18 27109801 27109897 -58879037 + LTR48B LTR ERV1 6 102 -542 * 1293 220 75 55 chr18 27109867 27110304 -58878630 + MER39 LTR ERV1 257 702 -5 387 370 50 18 chr18 27110445 27110723 -58878211 - L3 LINE CR1 -588 989 703 216 296 148 17 chr18 27110876 27110991 -58877943 + MIR SINE MIR 127 256 -6 1374 207 3 111 chr18 27111456 27111843 -58877091 - MLT1A1 LTR MaLR 0 365 21 550 233 86 6 chr18 27111896 27112059 -58876875 - MER5B DNA MER1_type -1 177 2 1553 211 14 0 chr18 27112522 27112801 -58876133 - AluJo SINE Alu -23 289 7 25 31 0 0 chr18 27112828 27112860 -58876074 + AT_rich Low_complexity Low_complexity 1 32 0 222 196 0 0 chr18 27112927 27112971 -58875963 + T-rich Low_complexity Low_complexity 1 47 -4 9721 28 2 0 chr18 27112971 27114901 -58874033 - L1PA4 LINE L1 -3 6152 4222 4867 139 62 6 chr18 27115633 27116868 -58872066 + L1PA16 LINE L1 4879 6163 -3 212 288 0 17 chr18 27116889 27116948 -58871986 + (TG)n Simple_repeat Simple_repeat 2 59 0 22 35 0 0 chr18 27117864 27117893 -58871041 + AT_rich Low_complexity Low_complexity 1 29 0 974 264 131 5 chr18 27118770 27119257 -58869677 + L2 LINE L2 2725 3287 -26 207 0 0 0 chr18 27119265 27119288 -58869646 + (TGAA)n Simple_repeat Simple_repeat 4 26 0 196 212 197 15 chr18 27119601 27119667 -58869267 - L2 LINE L2 -7 3265 3188 258 170 21 0 chr18 27119719 27119766 -58869168 - L2 LINE L2 0 3313 3266 2208 103 3 10 chr18 27119839 27120150 -58868784 - AluY SINE Alu -2 309 1 21 0 0 0 chr18 27120393 27120414 -58868520 + AT_rich Low_complexity Low_complexity 1 21 0 1668 226 94 51 chr18 27120738 27121247 -58867687 - LTR26B LTR ERV1 0 531 1 1769 146 187 11 chr18 27121837 27122201 -58866733 - MSTA LTR MaLR 0 428 1 196 298 0 18 chr18 27123395 27123452 -58865482 - L2 LINE L2 -2 3311 3256 469 251 62 105 chr18 27123855 27124269 -58864665 - L2 LINE L2 -1 3312 2 282 368 8 45 chr18 27125092 27125225 -58863709 + MER91A DNA MER1_type 61 188 -8 185 241 48 24 chr18 27125256 27125339 -58863595 + L2 LINE L2 1597 1681 -1633 188 380 67 40 chr18 27125478 27125899 -58863035 + L2 LINE L2 1864 2295 -1019 1024 204 33 5 chr18 27126582 27126793 -58862141 - AluJo SINE Alu -11 301 85 301 161 48 0 chr18 27128171 27128233 -58860701 + MLT1A1 LTR MaLR 301 365 0 316 141 0 71 chr18 27128348 27128433 -58860501 + L1MC5 LINE L1 7139 7217 -744 320 231 128 96 chr18 27128598 27128849 -58860085 + L1MC5 LINE L1 7305 7563 -398 22 35 0 0 chr18 27128849 27128878 -58860056 + AT_rich Low_complexity Low_complexity 1 29 0 186 43 0 0 chr18 27129705 27129728 -58859206 + (GAAA)n Simple_repeat Simple_repeat 3 25 0 1939 167 0 0 chr18 27129728 27130040 -58858894 + AluJb SINE Alu 1 312 0 832 136 92 49 chr18 27130162 27130346 -58858588 - THE1B LTR MaLR -2 362 171 198 0 0 0 chr18 27130352 27130374 -58858560 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 276 0 0 0 chr18 27130374 27130407 -58858527 - L1PA3 LINE L1 -11 6144 6112 216 0 0 0 chr18 27131899 27131923 -58857011 + (A)n Simple_repeat Simple_repeat 1 24 0 198 0 0 0 chr18 27132050 27132072 -58856862 + (A)n Simple_repeat Simple_repeat 1 22 0 253 278 175 10 chr18 27133685 27133782 -58855152 - MIR SINE MIR -75 187 75 208 267 0 0 chr18 27133920 27133965 -58854969 - MIR SINE MIR -215 47 3 2186 133 33 25 chr18 27134749 27135110 -58853824 + THE1B LTR MaLR 1 364 0 23 54 0 0 chr18 27135181 27135218 -58853716 + AT_rich Low_complexity Low_complexity 1 37 0 1642 228 35 28 chr18 27135397 27135826 -58853108 + MLT1C LTR MaLR 34 465 -2 621 288 85 6 chr18 27135909 27136119 -58852815 + MIR SINE MIR 19 241 -21 2031 131 0 0 chr18 27136922 27137244 -58851690 - AluSq SINE Alu 0 322 1 349 197 45 0 chr18 27140352 27140418 -58848516 + MIR SINE MIR 117 185 -77 186 43 0 0 chr18 27140509 27140532 -58848402 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1967 131 0 14 chr18 27140534 27140817 -58848117 - AluSq SINE Alu -30 283 5 463 322 51 19 chr18 27140877 27141091 -58847843 + MIR SINE MIR 42 262 0 1220 151 0 0 chr18 27141226 27141412 -58847522 - MSTB LTR MaLR -239 187 2 946 190 31 132 chr18 27141688 27142135 -58846799 - LTR37A LTR ERV1 -1 425 24 1135 239 51 103 chr18 27142353 27142847 -58846087 - MER31-int LTR ERV1 -827 4109 3642 308 266 44 74 chr18 27142909 27143138 -58845796 - MER31-int LTR ERV1 -1409 4922 4701 240 326 11 11 chr18 27143671 27143763 -58845171 + MER5B DNA MER1_type 87 178 0 309 232 43 82 chr18 27144184 27144391 -58844543 - MER31-int LTR ERV1 -2147 2789 2591 1209 168 13 148 chr18 27144465 27144917 -58844017 - LTR37A LTR ERV1 -18 408 18 447 348 112 16 chr18 27145066 27145371 -58843563 - L2 LINE L2 -64 3208 2875 319 312 58 40 chr18 27146002 27146175 -58842759 - MIR SINE MIR -34 228 53 1040 166 16 21 chr18 27146336 27146529 -58842405 - MER115 DNA AcHobo 0 693 502 457 311 0 0 chr18 27146822 27146944 -58841990 + MER5C DNA MER1_type 3 124 -200 281 268 134 28 chr18 27147062 27147204 -58841730 - MER115 DNA AcHobo -529 164 8 33 25 0 0 chr18 27148064 27148104 -58840830 + AT_rich Low_complexity Low_complexity 1 40 0 425 367 13 6 chr18 27148608 27148766 -58840168 - MER5A DNA MER1_type -1 188 30 1037 201 160 36 chr18 27149028 27149416 -58839518 + LTR37B LTR ERV1 32 467 -1 26 0 0 0 chr18 27150281 27150307 -58838627 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr18 27150657 27150680 -58838254 + AT_rich Low_complexity Low_complexity 1 23 0 488 262 204 16 chr18 27151483 27151796 -58837138 - LTR16A LTR ERVL -78 372 1 782 257 56 0 chr18 27152221 27152400 -58836534 + MER5A DNA MER1_type 1 189 0 545 274 47 57 chr18 27152862 27153249 -58835685 + MER31-int LTR ERV1 3419 3801 -1135 189 0 0 0 chr18 27153802 27153823 -58835111 + (A)n Simple_repeat Simple_repeat 1 21 0 2334 147 10 10 chr18 27153864 27154266 -58834668 + L1MA4 LINE L1 5619 6020 -280 356 177 38 0 chr18 27154281 27154360 -58834574 + L1MB4 LINE L1 6099 6180 0 815 193 113 69 chr18 27154414 27154452 -58834482 + LTR37B LTR ERV1 10 45 -423 1819 129 103 26 chr18 27154452 27154800 -58834134 + THE1C LTR MaLR 1 375 0 815 193 113 69 chr18 27154800 27155124 -58833810 + LTR37B LTR ERV1 45 388 -80 233 241 13 51 chr18 27155189 27155268 -58833666 - MER46C DNA MER2_type -261 77 2 220 179 18 18 chr18 27156567 27156623 -58832311 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 21 0 0 0 chr18 27156848 27156869 -58832065 + AT_rich Low_complexity Low_complexity 1 21 0 1854 162 16 7 chr18 27157726 27158034 -58830900 + AluJo SINE Alu 2 312 0 1092 222 167 12 chr18 27158800 27159249 -58829685 + MLT1H LTR MaLR 1 549 0 309 192 39 10 chr18 27159366 27159470 -58829464 + (TTATA)n Simple_repeat Simple_repeat 2 108 0 468 317 62 27 chr18 27159747 27159971 -58828963 - MLT1L LTR MaLR -52 563 332 782 264 169 25 chr18 27160120 27160284 -58828650 - HAL1 LINE L1 -728 1779 1640 1433 177 138 84 chr18 27160284 27160690 -58828244 + MSTA LTR MaLR 1 428 0 782 264 169 25 chr18 27160690 27161368 -58827566 - HAL1 LINE L1 -867 1640 790 434 218 0 0 chr18 27161752 27161830 -58827104 + MLT1B LTR MaLR 1 78 -312 6918 139 47 11 chr18 27161830 27162049 -58826885 - Tigger3b DNA MER2_type -1798 1230 1020 1785 188 15 12 chr18 27162049 27162389 -58826545 + MER2 DNA MER2_type 1 341 -3 6918 139 47 11 chr18 27162389 27162472 -58826462 - Tigger3b DNA MER2_type -2008 1020 941 1796 154 45 63 chr18 27162472 27162854 -58826080 + THE1C LTR MaLR 1 375 0 6918 139 47 11 chr18 27162854 27163735 -58825199 - Tigger3b DNA MER2_type -2087 941 3 1785 132 18 55 chr18 27163736 27164062 -58824872 + MLT1B LTR MaLR 77 390 0 2634 147 9 5 chr18 27164087 27164510 -58824424 - MER61B LTR ERV1 0 425 1 274 370 110 0 chr18 27164661 27164788 -58824146 + LTR16C LTR ERVL 142 282 -209 819 205 35 6 chr18 27164914 27165085 -58823849 + FRAM SINE Alu 1 176 0 2063 146 57 31 chr18 27165103 27165528 -58823406 - LTR23 LTR ERV1 0 437 2 1301 223 66 63 chr18 27166099 27166581 -58822353 - LTR48B LTR ERV1 -16 771 130 357 280 0 34 chr18 27166553 27166671 -58822263 - MER34 LTR ERV1 -428 114 1 * 212 350 26 8 chr18 27166995 27167112 -58821822 + L2 LINE L2 3194 3312 -1 777 63 45 9 chr18 27167566 27167677 -58821257 - L1PA11 LINE L1 0 6174 6060 12588 34 6 1 chr18 27167781 27169318 -58819616 + L1P LINE L1 3498 5041 -1105 281 53 105 0 chr18 27169418 27169475 -58819459 - MER30B DNA MER1_type -122 68 6 5760 187 7 3 chr18 27169497 27170544 -58818390 - L1P LINE L1 -876 5270 4216 3506 227 8 38 chr18 27170544 27171208 -58817726 + LTR9B LTR ERV1 1 644 0 5760 187 7 3 chr18 27171208 27171291 -58817643 - L1P LINE L1 -1930 4216 4135 349 195 92 46 chr18 27171298 27171385 -58817549 + Charlie1 DNA MER1_type 137 227 -2534 * 453 199 14 71 chr18 27171380 27171521 -58817413 + Charlie1 DNA MER1_type 2621 2753 -8 194 0 39 0 chr18 27171783 27171809 -58817125 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 24 32 0 0 chr18 27172389 27172420 -58816514 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr18 27173036 27173059 -58815875 + AT_rich Low_complexity Low_complexity 1 23 0 442 281 6 24 chr18 27173061 27173228 -58815706 - MER103 DNA DNA -1 165 2 3692 228 27 13 chr18 27175751 27176537 -58812397 - MER21B LTR ERV1 -24 839 43 217 132 0 0 chr18 27176683 27176721 -58812213 + (TA)n Simple_repeat Simple_repeat 2 39 0 288 277 92 23 chr18 27178949 27179079 -58809855 + L2 LINE L2 3175 3313 0 207 0 0 0 chr18 27180088 27180111 -58808823 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 197 314 0 29 chr18 27180546 27180616 -58808318 - L2 LINE L2 0 3272 3205 657 259 39 10 chr18 27180729 27180934 -58808000 - MIR SINE MIR -29 233 23 302 345 42 24 chr18 27180960 27181125 -58807809 + L1ME3A LINE L1 5231 5398 -748 284 378 59 3 chr18 27181128 27181435 -58807499 + L1ME3A LINE L1 5582 5905 -265 513 316 78 33 chr18 27181633 27181877 -58807057 - MIR SINE MIR 0 262 8 5355 141 8 13 chr18 27181896 27182789 -58806145 - L1PA16 LINE L1 -6 6160 5273 8519 228 42 23 chr18 27182791 27183907 -58805027 - L1PA16 LINE L1 -2082 4064 2971 1781 177 0 7 chr18 27183907 27184207 -58804727 + AluSg SINE Alu 1 298 -12 8519 228 42 23 chr18 27184207 27185432 -58803502 - L1PA16 LINE L1 -3175 2971 1678 274 345 76 7 chr18 27185717 27185862 -58803072 - MIR SINE MIR -11 251 97 21 0 0 0 chr18 27186241 27186262 -58802672 + AT_rich Low_complexity Low_complexity 1 21 0 691 266 80 21 chr18 27186584 27186821 -58802113 + MIR SINE MIR 2 252 -10 356 354 31 12 chr18 27186853 27187014 -58801920 - MIR3 SINE MIR -25 183 20 213 224 10 0 chr18 27189048 27189109 -58799825 + A-rich Low_complexity Low_complexity 1 61 0 2871 178 16 11 chr18 27189966 27190522 -58798412 + MER89 LTR ERV1 1 559 0 1788 135 13 53 chr18 27191757 27191929 -58797005 - AluJb SINE Alu -7 305 150 2160 136 0 0 chr18 27191929 27192230 -58796704 - AluSg SINE Alu -9 301 1 1788 135 13 53 chr18 27192230 27192375 -58796559 - AluJb SINE Alu -162 150 1 951 279 111 32 chr18 27192375 27193091 -58795843 - L2 LINE L2 -11 3302 2549 803 196 65 0 chr18 27193841 27194009 -58794925 + AluJo SINE Alu 121 299 -13 642 218 8 0 chr18 27194461 27194585 -58794349 + AluJb SINE Alu 137 261 -51 1044 198 16 5 chr18 27194611 27194798 -58794136 - MER5A DNA MER1_type 0 189 1 1067 202 55 105 chr18 27196217 27196372 -58792562 - MER39 LTR ERV1 -4 703 542 4320 24 0 0 chr18 27196372 27196877 -58792057 + L1PA4 LINE L1 5648 6152 -3 1067 202 55 105 chr18 27196877 27197103 -58791831 - MER39 LTR ERV1 -165 542 341 563 184 120 8 chr18 27197106 27197231 -58791703 - MER39 LTR ERV1 -568 139 1 212 227 0 0 chr18 27197327 27197371 -58791563 + MIR SINE MIR 219 262 0 31 76 0 0 chr18 27197463 27197529 -58791405 + AT_rich Low_complexity Low_complexity 1 66 0 2126 119 7 0 chr18 27198159 27198461 -58790473 - AluSg SINE Alu -6 304 1 21 0 0 0 chr18 27198468 27198489 -58790445 + AT_rich Low_complexity Low_complexity 1 21 0 228 276 236 16 chr18 27198660 27198783 -58790151 - L3 LINE CR1 -28 1549 1400 2148 109 0 0 chr18 27200464 27200782 -58788152 - AluSq SINE Alu 0 318 1 1268 205 58 53 chr18 27201731 27202073 -58786861 + MER2 DNA MER2_type 1 344 0 245 189 113 0 chr18 27202232 27202285 -58786649 + MIR SINE MIR 91 149 -59 207 167 0 0 chr18 27202395 27202437 -58786497 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 322 234 21 64 chr18 27202604 27202698 -58786236 + L1MC4 LINE L1 6615 6704 -1338 1720 142 16 10 chr18 27203234 27203545 -58785389 - L1MA5A LINE L1 -2 6295 5983 355 289 191 51 chr18 27203547 27203782 -58785152 + L1M2c LINE L1 919 1186 -5603 333 277 20 10 chr18 27203798 27203899 -58785035 - L1MEd LINE L1 -4973 1146 1045 698 210 8 0 chr18 27204089 27204213 -58784721 - FLAM_A SINE Alu -8 125 1 300 295 38 0 chr18 27204557 27204662 -58784272 + HAL1 LINE L1 1495 1603 -904 3471 90 20 0 chr18 27205262 27205752 -58783182 - L1PA13 LINE L1 -5 6158 5659 453 269 208 40 chr18 27206454 27206829 -58782105 + L1M2c LINE L1 2826 3263 -3525 24 32 0 0 chr18 27206829 27206860 -58782074 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr18 27206975 27207003 -58781931 + AT_rich Low_complexity Low_complexity 1 28 0 251 231 0 33 chr18 27207064 27207155 -58781779 + L1M LINE L1 5255 5342 -2466 587 252 0 9 chr18 27207419 27207534 -58781400 + MER81 DNA DNA 1 114 0 749 173 0 0 chr18 27207667 27207794 -58781140 - LTR54 LTR ERV1 -61 449 323 2355 176 23 59 chr18 27207859 27208388 -58780546 + LTR54 LTR ERV1 1 510 0 22 35 0 0 chr18 27209346 27209375 -58779559 + AT_rich Low_complexity Low_complexity 1 29 0 235 326 31 0 chr18 27209983 27210081 -58778853 + LTR50 LTR ERVL 490 590 -205 186 43 0 0 chr18 27210168 27210191 -58778743 + (T)n Simple_repeat Simple_repeat 1 23 0 2380 86 0 10 chr18 27411104 27411408 -58577526 + AluSg SINE Alu 1 301 -9 381 294 52 52 chr18 27411615 27411768 -58577166 - MIR3 SINE MIR -18 190 38 3262 21 0 0 chr18 27412673 27413057 -58575877 - L1P LINE L1 -869 5277 4894 * 8211 23 1 0 chr18 27413055 27414016 -58574918 + L1P LINE L1 3959 4920 -1226 356 322 20 27 chr18 27414017 27414166 -58574768 + MIR3 SINE MIR 54 201 -7 190 245 31 71 chr18 27415005 27415103 -58573831 + MIR3 SINE MIR 103 196 -12 217 200 0 0 chr18 27415315 27415355 -58573579 + MIR3 SINE MIR 151 190 -18 1620 114 37 87 chr18 27415776 27416102 -58572832 + AluSq SINE Alu 1 311 0 226 353 118 22 chr18 27417117 27417253 -58571681 + L2 LINE L2 3116 3264 -8 4353 189 30 37 chr18 27418256 27419436 -58569498 + L1MA9 LINE L1 4600 5785 -527 180 111 0 0 chr18 27419436 27419463 -58569471 + (TATATG)n Simple_repeat Simple_repeat 2 28 0 4353 189 30 37 chr18 27419463 27419951 -58568983 + L1MA9 LINE L1 5785 6275 -37 229 301 14 14 chr18 27422627 27422700 -58566234 - MIR SINE MIR -80 182 110 444 278 40 7 chr18 27422721 27422872 -58566062 - MIR SINE MIR -30 232 77 538 168 0 168 chr18 27423923 27424090 -58564844 - MER90 LTR ERV1 0 614 476 2255 97 3 7 chr18 27424097 27424395 -58564539 + AluSc SINE Alu 1 297 -12 1402 223 47 13 chr18 27424408 27424726 -58564208 - MER90 LTR ERV1 -240 335 7 544 294 119 0 chr18 27424795 27424996 -58563938 - MIR SINE MIR -20 242 18 800 168 20 56 chr18 27425249 27425445 -58563489 + MER53 DNA DNA 1 189 0 471 185 17 8 chr18 27427205 27427324 -58561610 - L1MB8 LINE L1 0 6178 6059 2286 222 60 62 chr18 27427325 27428547 -58560387 - L1MCa LINE L1 -4850 1195 414 1072 242 62 59 chr18 27428547 27428919 -58560015 - MLT1A2 LTR MaLR -1 373 1 2286 222 60 62 chr18 27428919 27429083 -58559851 - L1MCa LINE L1 -5631 414 251 1363 179 8 4 chr18 27429083 27429323 -58559611 + MLT2C2 LTR ERVL 1 241 -223 396 0 0 0 chr18 27429326 27429370 -58559564 + (TG)n Simple_repeat Simple_repeat 1 44 0 613 270 16 64 chr18 27429474 27429760 -58559174 - L1MCa LINE L1 -5792 344 3 2719 74 14 0 chr18 27429788 27430138 -58558796 - THE1A LTR MaLR 0 355 1 11662 96 4 2 chr18 27430138 27431714 -58557220 - THE1A-int LTR MaLR 0 1580 1 2597 63 18 0 chr18 27431714 27432046 -58556888 - THE1A LTR MaLR 0 355 18 621 233 35 0 chr18 27432060 27432232 -58556702 - L1MB8 LINE L1 -289 5889 5712 1908 237 58 83 chr18 27432271 27432619 -58556315 - L1ME1 LINE L1 -41 6385 6030 3723 224 42 8 chr18 27432619 27433453 -58555481 - MER21B LTR ERV1 -1 862 1 1908 237 58 83 chr18 27433453 27434077 -58554857 - L1ME1 LINE L1 -396 6030 5448 825 266 19 27 chr18 27434080 27434339 -58554595 - L1ME1 LINE L1 -1853 4553 4297 1851 167 20 3 chr18 27434352 27434646 -58554288 + AluSg SINE Alu 1 299 -11 1015 202 46 17 chr18 27434655 27434893 -58554041 + AluJo SINE Alu 4 248 -64 1922 265 62 18 chr18 27434963 27435005 -58553929 - L1ME1 LINE L1 -2129 4277 4238 1103 212 99 68 chr18 27435005 27435359 -58553575 - MLT1A1 LTR MaLR 0 365 1 1922 265 62 18 chr18 27435359 27436078 -58552856 - L1ME1 LINE L1 -2168 4238 3483 250 274 123 7 chr18 27436118 27436264 -58552670 + MER20B DNA MER1_type 620 782 -1 351 149 4 0 chr18 27436415 27436495 -58552439 - L1M4 LINE L1 -2910 3236 3155 524 262 28 0 chr18 27436635 27436776 -58552158 - L1M4 LINE L1 -3351 2795 2651 * 1062 242 135 40 chr18 27436744 27437549 -58551385 - L1ME1 LINE L1 -4757 1649 777 332 302 16 32 chr18 27438188 27438377 -58550557 + L1MC4a LINE L1 2436 2621 -3525 1678 139 34 4 chr18 27438402 27438668 -58550266 + AluSx SINE Alu 33 306 -6 503 309 47 29 chr18 27438971 27439246 -58549688 + L1ME3A LINE L1 5566 5845 -325 2290 262 43 23 chr18 27439274 27439892 -58549042 + L1MC4a LINE L1 4637 4834 -1312 6649 113 45 69 chr18 27439892 27441153 -58547781 + Tigger3b DNA MER2_type 1 1231 0 2290 262 43 23 chr18 27441153 27441727 -58547207 + L1MC4a LINE L1 4834 5395 -751 4465 212 94 20 chr18 27441834 27442241 -58546693 + L1MC4a LINE L1 6172 6547 -1261 210 105 0 0 chr18 27442241 27442279 -58546655 + (TG)n Simple_repeat Simple_repeat 1 38 0 4465 212 94 20 chr18 27442279 27443092 -58545842 + L1MC4a LINE L1 6547 7483 -325 818 217 40 48 chr18 27443104 27443353 -58545581 + L1MD3 LINE L1 7749 7995 0 2458 63 3 28 chr18 27443359 27443676 -58545258 + AluY SINE Alu 1 309 -2 21 0 0 0 chr18 27444431 27444452 -58544482 + AT_rich Low_complexity Low_complexity 1 21 0 315 209 0 114 chr18 27444470 27444575 -58544359 + L1MC4 LINE L1 6614 6706 -1336 302 209 19 95 chr18 27444491 27444596 -58544338 - L1MC4 LINE L1 -1334 6708 6612 * 631 314 57 14 chr18 27445201 27445497 -58543437 - MARNA DNA Mariner -56 530 222 440 286 0 0 chr18 27446467 27446572 -58542362 + MIR SINE MIR 157 261 -1 236 308 87 0 chr18 27447416 27447520 -58541414 - L2 LINE L2 -22 3291 3179 1803 33 0 0 chr18 27448523 27448738 -58540196 - L1PA5 LINE L1 -1 6153 5939 909 222 42 27 chr18 27448738 27448999 -58539935 - L1MC4 LINE L1 -135 7907 7643 6931 55 15 0 chr18 27449133 27450352 -58538582 - L1PA7 LINE L1 0 6154 4926 798 232 84 17 chr18 27450355 27450700 -58538234 - L1M4 LINE L1 -784 5362 4995 992 130 7 0 chr18 27450704 27450858 -58538076 - Tigger1 DNA MER2_type -113 2305 2151 1174 299 137 14 chr18 27450879 27451667 -58537267 - L1ME LINE L1 -4759 2379 1342 445 312 162 41 chr18 27451774 27452306 -58536628 - L1ME LINE L1 -5474 1473 878 183 318 168 9 chr18 27452718 27452825 -58536109 + L2 LINE L2 3140 3263 -9 410 316 7 15 chr18 27453280 27453416 -58535518 - MIR SINE MIR -11 251 117 212 237 0 0 chr18 27457250 27457288 -58531646 + polypurine Low_complexity Low_complexity 1 38 0 194 88 0 29 chr18 27458392 27458426 -58530508 + (TTAA)n Simple_repeat Simple_repeat 2 34 0 246 348 98 61 chr18 27458498 27458837 -58530097 + L2 LINE L2 2673 3043 -229 2189 133 88 18 chr18 27458837 27459237 -58529697 - MSTA LTR MaLR 0 428 1 246 348 98 61 chr18 27459237 27459465 -58529469 + L2 LINE L2 3043 3261 -11 1565 177 7 37 chr18 27460224 27460523 -58528411 - AluJb SINE Alu -17 295 6 338 331 30 30 chr18 27460972 27461105 -58527829 + MIR SINE MIR 12 144 -118 2560 132 34 5 chr18 27461573 27461989 -58526945 + MSTA LTR MaLR 1 428 0 2576 53 0 0 chr18 27463531 27463833 -58525101 - AluY SINE Alu -9 302 1 331 347 83 0 chr18 27464909 27465030 -58523904 - MIR SINE MIR -117 145 15 398 283 26 40 chr18 27465759 27465911 -58523023 + MIR SINE MIR 19 168 -94 322 213 0 0 chr18 27465945 27466006 -58522928 - HsTC2 DNA Tc2 -610 1288 1228 1290 199 28 24 chr18 27467228 27467515 -58521419 + AluJo SINE Alu 1 288 -24 252 0 0 0 chr18 27467917 27467945 -58520989 + (T)n Simple_repeat Simple_repeat 1 28 0 343 236 111 50 chr18 27469323 27469522 -58519412 + L1MC4 LINE L1 3729 3939 -2207 183 148 16 82 chr18 27470240 27470422 -58518512 + (TATATG)n Simple_repeat Simple_repeat 6 175 0 454 296 64 39 chr18 27471175 27471503 -58517431 + L1MC4 LINE L1 5272 5615 -556 746 241 85 35 chr18 27471929 27472248 -58516686 + L1MC4 LINE L1 5607 5941 -1867 25 51 0 0 chr18 27472425 27472464 -58516470 + AT_rich Low_complexity Low_complexity 1 39 0 203 171 0 0 chr18 27473836 27473877 -58515057 + A-rich Low_complexity Low_complexity 1 41 0 395 234 298 19 chr18 27476063 27476268 -58512666 + MIR SINE MIR 1 262 0 475 307 48 61 chr18 27476791 27477084 -58511850 + MLT1I LTR MaLR 90 378 -31 308 299 0 31 chr18 27477528 27477625 -58511309 + L2 LINE L2 2566 2659 -655 329 0 0 24 chr18 27478120 27478162 -58510772 + (TCCA)n Simple_repeat Simple_repeat 1 41 0 189 320 165 48 chr18 27478174 27478256 -58510678 + L2 LINE L2 3022 3093 -179 1771 161 7 16 chr18 27478256 27478561 -58510373 - AluJb SINE Alu -10 302 1 189 320 165 48 chr18 27478561 27478684 -58510250 + L2 LINE L2 3093 3251 -21 632 226 46 74 chr18 27479001 27479218 -58509716 - MIR SINE MIR -7 255 45 21 57 0 0 chr18 27479248 27479283 -58509651 + AT_rich Low_complexity Low_complexity 1 35 0 225 279 13 0 chr18 27479430 27479509 -58509425 + (TA)n Simple_repeat Simple_repeat 2 81 0 334 287 21 0 chr18 27479511 27479605 -58509329 - L1MC4 LINE L1 -1339 6703 6608 305 283 22 11 chr18 27479564 27479656 -58509278 + L1MC4 LINE L1 6611 6703 -1339 * 2281 132 16 29 chr18 27479674 27480054 -58508880 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr18 27480482 27480503 -58508431 + AT_rich Low_complexity Low_complexity 1 21 0 851 185 0 0 chr18 27480877 27481023 -58507911 + FRAM SINE Alu 1 146 -30 291 28 0 0 chr18 27481028 27481064 -58507870 + (CA)n Simple_repeat Simple_repeat 2 37 0 226 211 0 0 chr18 27482055 27482107 -58506827 + (CA)n Simple_repeat Simple_repeat 1 52 0 387 350 133 18 chr18 27482258 27482641 -58506293 - L2 LINE L2 -35 3237 2811 862 132 0 22 chr18 27482825 27482961 -58505973 + AluJb SINE Alu 1 133 -179 734 228 107 15 chr18 27484991 27485188 -58503746 + MER58C DNA MER1_type 1 215 0 586 284 77 27 chr18 27485625 27485847 -58503087 - MIR SINE MIR -9 253 21 534 295 83 18 chr18 27486004 27486221 -58502713 - MIR SINE MIR -25 237 7 1767 131 14 21 chr18 27486731 27487014 -58501920 + AluSg SINE Alu 30 310 0 399 254 203 34 chr18 27487494 27487671 -58501263 + Charlie8 DNA MER1_type 27 233 -2184 197 270 0 63 chr18 27489019 27489082 -58499852 - L2 LINE L2 0 3313 3255 401 317 61 6 chr18 27489103 27489267 -58499667 - MIR SINE MIR -6 256 84 2071 91 59 0 chr18 27490734 27491021 -58497913 + AluSq SINE Alu 1 304 -9 21 36 0 0 chr18 27491021 27491049 -58497885 + AT_rich Low_complexity Low_complexity 1 28 0 326 292 0 0 chr18 27491582 27491654 -58497280 + MIR SINE MIR 47 118 -144 623 209 15 126 chr18 27491730 27491936 -58496998 - MER58A DNA MER1_type -6 218 36 2397 79 0 0 chr18 27491955 27492246 -58496688 + AluSg SINE Alu 1 291 -19 182 283 0 19 chr18 27493401 27493454 -58495480 + MIR SINE MIR 7 58 -204 357 326 112 35 chr18 27493711 27493996 -58494938 - L2 LINE L2 -9 3263 2957 800 239 47 75 chr18 27494753 27495075 -58493859 + MLT1J1 LTR MaLR 133 445 -1 493 313 43 21 chr18 27495224 27495457 -58493477 - MER102a DNA MER1_type 0 330 93 2007 187 6 6 chr18 27495591 27495950 -58492984 + MLT1A1 LTR MaLR 1 359 -6 2698 204 232 23 chr18 27496389 27497242 -58491692 - LTR28 LTR ERV1 0 1020 1 221 272 18 132 chr18 27497607 27497721 -58491213 + MIR SINE MIR 147 247 -15 1584 251 75 58 chr18 27499231 27499665 -58489269 + L1ME3 LINE L1 4665 5090 -1072 1666 164 21 25 chr18 27499665 27499951 -58488983 - AluJb SINE Alu -23 289 5 1584 251 75 58 chr18 27499951 27500887 -58488047 + L1ME3 LINE L1 5090 6074 -88 269 268 107 67 chr18 27500907 27501310 -58487624 + L1MCc LINE L1 20 438 -5985 180 365 0 0 chr18 27502588 27502651 -58486283 + MIR SINE MIR 23 85 -177 308 376 58 10 chr18 27503088 27503293 -58485641 + MIR SINE MIR 47 261 -1 303 377 8 0 chr18 27503523 27503645 -58485289 + L2 LINE L2 3187 3309 -4 21 36 0 0 chr18 27503979 27504007 -58484927 + AT_rich Low_complexity Low_complexity 1 28 0 194 344 31 21 chr18 27507473 27507569 -58481365 - MIR SINE MIR -159 103 7 235 247 13 52 chr18 27507672 27507749 -58481185 - MIR SINE MIR -121 141 68 212 316 116 0 chr18 27507986 27508081 -58480853 - MIR SINE MIR -120 142 37 207 0 0 0 chr18 27508218 27508241 -58480693 + (CATA)n Simple_repeat Simple_repeat 2 24 0 379 316 65 49 chr18 27508735 27508982 -58479952 - MIR SINE MIR -10 252 2 527 281 69 10 chr18 27512608 27512811 -58476123 - MIR SINE MIR -40 222 8 1903 81 0 12 chr18 27515017 27515265 -58473669 + AluSg SINE Alu 59 303 -7 554 154 118 0 chr18 27516264 27516374 -58472560 + MER20 DNA MER1_type 96 218 -1 187 258 11 108 chr18 27516620 27516713 -58472221 + L2 LINE L2 3227 3310 -3 292 188 188 30 chr18 27516898 27517031 -58471903 + MER113 DNA MER1_type? 70 223 -298 318 303 18 18 chr18 27517203 27517312 -58471622 - L2 LINE L2 -2 3270 3162 372 80 0 0 chr18 27517431 27517481 -58471453 + MADE1 DNA Mariner 1 50 -30 2463 58 0 0 chr18 27517745 27518040 -58470894 - AluY SINE Alu -16 295 1 261 269 39 0 chr18 27518041 27518119 -58470815 + MIR SINE MIR 88 168 -94 787 239 53 16 chr18 27518182 27518429 -58470505 - MIR SINE MIR 0 262 7 1566 147 33 29 chr18 27518544 27518816 -58470118 - AluJb SINE Alu -10 302 30 229 227 0 0 chr18 27519594 27519660 -58469274 + L1MC4 LINE L1 6640 6705 -1337 2092 112 49 25 chr18 27519694 27520060 -58468874 + THE1C LTR MaLR 1 375 0 1853 138 7 0 chr18 27520061 27520336 -58468598 - AluJb SINE Alu -35 277 1 473 268 83 19 chr18 27520336 27520493 -58468441 - MIR SINE MIR -49 213 47 675 335 85 17 chr18 27520830 27521182 -58467752 - L3b LINE CR1 -4 1579 1204 567 233 62 7 chr18 27524109 27524255 -58464679 + L2 LINE L2 3160 3313 0 22 35 0 0 chr18 27524547 27524576 -58464358 + AT_rich Low_complexity Low_complexity 1 29 0 433 267 88 37 chr18 27526116 27526333 -58462601 - MIR SINE MIR -23 239 12 1413 85 0 40 chr18 27526371 27526571 -58462363 + AluSx SINE Alu 1 192 -120 1871 135 0 41 chr18 27527195 27527514 -58461420 - AluSx SINE Alu -6 306 1 1826 70 8 0 chr18 27527995 27528236 -58460698 + L1PA6 LINE L1 5912 6154 0 239 284 111 24 chr18 27528240 27528516 -58460418 + L1P LINE L1 4747 5038 -1108 1714 83 76 38 chr18 27530149 27530413 -58458521 - AluY SINE Alu -18 293 20 249 175 0 35 chr18 27532556 27532613 -58456321 + L2 LINE L2 3259 3313 0 22 0 0 0 chr18 27533519 27533541 -58455393 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr18 27534078 27534111 -58454823 + AT_rich Low_complexity Low_complexity 1 33 0 187 369 0 36 chr18 27535160 27535244 -58453690 + L2 LINE L2 2568 2648 -666 214 296 71 20 chr18 27536013 27536111 -58452823 - MIR SINE MIR -34 228 126 3116 221 26 12 chr18 27536331 27537185 -58451749 - L1PB1 LINE L1 -2222 3924 3059 2706 183 28 111 chr18 27537185 27538151 -58450783 + L1PB1 LINE L1 3928 4813 -1333 * 4402 119 57 16 chr18 27538132 27538886 -58450048 + L1PB1 LINE L1 5360 6144 -7 413 206 9 0 chr18 27538893 27539000 -58449934 + GA-rich Low_complexity Low_complexity 2 109 0 22 56 0 0 chr18 27539881 27539917 -58449017 + AT_rich Low_complexity Low_complexity 1 36 0 1205 204 96 4 chr18 27540283 27540563 -58448371 + L1MC2 LINE L1 6031 6336 -8 1856 147 17 7 chr18 27542918 27543211 -58445723 - AluSx SINE Alu -16 296 1 33 66 0 0 chr18 27544015 27544076 -58444858 + AT_rich Low_complexity Low_complexity 1 61 0 24 77 0 0 chr18 27544150 27544202 -58444732 + AT_rich Low_complexity Low_complexity 1 52 0 248 246 0 16 chr18 27544444 27544505 -58444429 + GA-rich Low_complexity Low_complexity 4 63 0 1937 128 10 3 chr18 27544827 27545142 -58443792 + AluSx SINE Alu 1 317 0 692 154 24 0 chr18 27545202 27545325 -58443609 - L1MA6 LINE L1 -2 6298 6173 317 283 44 0 chr18 27545326 27545439 -58443495 + L1MA6 LINE L1 6049 6166 -134 23 0 0 0 chr18 27545458 27545481 -58443453 + AT_rich Low_complexity Low_complexity 1 23 0 324 146 85 24 chr18 27546231 27546313 -58442621 - Charlie5 DNA MER1_type 0 2620 2534 315 336 75 65 chr18 27546407 27546806 -58442128 + MLT1I LTR MaLR 5 407 -2 206 254 16 0 chr18 27550074 27550137 -58438797 + A-rich Low_complexity Low_complexity 2 65 0 198 71 0 0 chr18 27550285 27550313 -58438621 + (CTGGGG)n Simple_repeat Simple_repeat 2 29 0 1362 287 171 25 chr18 27550481 27551230 -58437704 + L2 LINE L2 2081 2938 -376 252 86 0 0 chr18 27553071 27553106 -58435828 + (TG)n Simple_repeat Simple_repeat 2 36 0 280 331 134 38 chr18 27553677 27553834 -58435100 + MIR3 SINE MIR 16 187 -21 21 36 0 0 chr18 27554004 27554032 -58434902 + AT_rich Low_complexity Low_complexity 1 28 0 223 98 59 0 chr18 27554250 27554301 -58434633 + A-rich Low_complexity Low_complexity 6 59 0 1866 146 11 0 chr18 27557733 27558014 -58430920 + AluJb SINE Alu 1 284 -28 492 48 0 0 chr18 27558014 27558077 -58430857 + (TG)n Simple_repeat Simple_repeat 1 63 0 186 325 137 39 chr18 27558212 27558446 -58430488 - L3b LINE CR1 -225 1358 1102 317 246 5 14 chr18 27559072 27559152 -58429782 - MIR SINE MIR -65 143 67 25 0 0 0 chr18 27561499 27561524 -58427410 + AT_rich Low_complexity Low_complexity 1 25 0 503 191 0 0 chr18 27562147 27562236 -58426698 - L2 LINE L2 0 3313 3225 2647 82 3 16 chr18 27562687 27563051 -58425883 + L1PB2 LINE L1 5782 6140 -11 270 73 0 0 chr18 27563051 27563092 -58425842 + (TA)n Simple_repeat Simple_repeat 1 41 0 2094 118 0 23 chr18 27563466 27563772 -58425162 - AluSx SINE Alu -13 299 1 404 318 69 11 chr18 27564258 27564409 -58424525 + MIR SINE MIR 51 217 -45 234 0 0 0 chr18 27564409 27564435 -58424499 + (TG)n Simple_repeat Simple_repeat 2 27 0 404 318 69 11 chr18 27564435 27564472 -58424462 + MIR SINE MIR 217 250 -12 298 344 45 19 chr18 27565070 27565227 -58423707 + L2 LINE L2 2890 3050 -222 220 333 0 0 chr18 27565336 27565402 -58423532 + L2 LINE L2 3206 3271 -1 2577 48 0 3 chr18 27567140 27567451 -58421483 + AluY SINE Alu 1 310 -1 490 237 53 23 chr18 27568766 27568897 -58420037 + MER5B DNA MER1_type 40 174 -4 195 42 0 0 chr18 27569089 27569113 -58419821 + (A)n Simple_repeat Simple_repeat 1 24 0 401 301 144 6 chr18 27569293 27569466 -58419468 - MIR SINE MIR -12 250 54 368 241 89 9 chr18 27571285 27571428 -58417506 + MLT1G1 LTR MaLR 281 405 -4 420 309 118 11 chr18 27571617 27571795 -58417139 - MIR SINE MIR -12 250 54 2044 156 34 21 chr18 27574049 27574428 -58414506 + MLT1B LTR MaLR 2 385 -5 259 114 114 0 chr18 27574662 27574706 -58414228 + LTR54 LTR ERV1 51 99 -411 302 262 176 4 chr18 27574717 27574926 -58414008 + MER57B LTR ERV1 108 347 -56 275 188 16 0 chr18 27574900 27574964 -58413970 + LTR54 LTR ERV1 427 491 -19 * 434 321 75 5 chr18 27575041 27575228 -58413706 + MER57-int LTR ERV1 1946 2145 -4186 768 179 241 0 chr18 27576087 27576282 -58412652 + MER34C LTR ERV1 68 309 -276 1658 153 45 17 chr18 27576295 27576582 -58412352 - THE1B LTR MaLR -69 295 1 349 176 0 0 chr18 27576651 27576719 -58412215 + MER57-int LTR ERV1 1123 1190 -3681 339 171 80 85 chr18 27576699 27576875 -58412059 + MER57-int LTR ERV1 2565 2739 -4019 * 3712 203 81 122 chr18 27576962 27578599 -58410335 + MER57-int LTR ERV1 1843 3545 -3992 2008 143 3 7 chr18 27578599 27578900 -58410034 + AluSx SINE Alu 1 300 -12 3712 203 81 122 chr18 27578900 27579836 -58409098 + MER57-int LTR ERV1 3545 6205 -1332 2074 230 28 28 chr18 27580050 27580559 -58408375 + MER57-int LTR ERV1 6635 7143 -394 482 212 126 14 chr18 27580562 27580924 -58408010 + LTR54 LTR ERV1 24 510 0 220 308 11 11 chr18 27580925 27581016 -58407918 + (TA)n Simple_repeat Simple_repeat 1 91 0 988 247 115 43 chr18 27581017 27581415 -58407519 - L1MC5 LINE L1 -382 7579 7132 1981 139 3 3 chr18 27581415 27581702 -58407232 - AluSx SINE Alu -25 287 1 988 247 115 43 chr18 27581702 27581833 -58407101 - L1MC5 LINE L1 -829 7132 7012 648 239 113 0 chr18 27581945 27582104 -58406830 - L1MC5 LINE L1 -1149 6812 6636 1428 150 146 8 chr18 27582577 27582830 -58406104 + AluSx SINE Alu 1 288 -14 2440 101 46 0 chr18 27582862 27583207 -58405727 - THE1B LTR MaLR -3 361 1 479 263 28 50 chr18 27583207 27583386 -58405548 - L1MC5 LINE L1 -1947 5861 5687 2003 126 3 0 chr18 27583907 27584193 -58404741 + AluSx SINE Alu 1 287 -25 668 167 80 33 chr18 27585495 27585645 -58403289 - FRAM SINE Alu -19 157 1 21 36 0 0 chr18 27585753 27585781 -58403153 + AT_rich Low_complexity Low_complexity 1 28 0 299 180 49 0 chr18 27586110 27586171 -58402763 - MER69 DNA AcHobo -2461 65 2 2207 126 30 61 chr18 27588416 27588876 -58400058 - L1MB8 LINE L1 -5 6173 5728 187 268 0 36 chr18 27589045 27589101 -58399833 + MIR SINE MIR 91 144 -64 465 304 67 0 chr18 27589236 27589430 -58399504 - LTR33 LTR ERVL -284 237 31 334 205 236 31 chr18 27591511 27591672 -58397262 - MIR SINE MIR -50 212 19 222 263 110 61 chr18 27593183 27593411 -58395523 + L2 LINE L2 1875 2113 -1201 562 306 23 27 chr18 27594919 27595155 -58393779 + MIR SINE MIR 1 227 -35 24 67 0 0 chr18 27595266 27595311 -58393623 + AT_rich Low_complexity Low_complexity 1 45 0 1012 93 8 0 chr18 27595630 27595759 -58393175 - AluSq/x SINE Alu -181 132 3 21 71 0 0 chr18 27595845 27595887 -58393047 + AT_rich Low_complexity Low_complexity 1 42 0 264 270 81 27 chr18 27596147 27596258 -58392676 + MIR SINE MIR 24 140 -68 201 284 57 71 chr18 27596282 27596423 -58392511 - L2 LINE L2 0 3313 3175 640 296 22 48 chr18 27597498 27597728 -58391206 + MIR SINE MIR 24 247 -15 1683 62 0 9 chr18 27597754 27597979 -58390955 - L1PA5 LINE L1 0 6154 5932 2305 110 0 0 chr18 27598824 27599133 -58389801 + AluSx SINE Alu 1 309 -3 205 240 67 53 chr18 27602203 27602278 -58386656 + MIR SINE MIR 71 146 -62 1362 195 0 15 chr18 27603359 27603620 -58385314 + AluJo SINE Alu 21 277 -35 185 296 84 14 chr18 27604060 27604131 -58384803 + L3 LINE CR1 1495 1570 -7 22 0 0 0 chr18 27604674 27604696 -58384238 + AT_rich Low_complexity Low_complexity 1 22 0 304 224 235 0 chr18 27604696 27604781 -58384153 - MIR3 SINE MIR -28 180 76 243 286 86 0 chr18 27606981 27607051 -58381883 + L2 LINE L2 3196 3271 -1 367 83 42 14 chr18 27608972 27609044 -58379890 + A-rich Low_complexity Low_complexity 2 75 0 358 293 32 32 chr18 27610997 27611120 -58377814 - L2 LINE L2 0 3272 3150 1566 159 206 0 chr18 27613047 27613368 -58375566 - MLT1B LTR MaLR -3 387 1 27 49 0 0 chr18 27613827 27613868 -58375066 + AT_rich Low_complexity Low_complexity 1 41 0 1872 168 0 7 chr18 27615421 27615729 -58373205 + AluSx SINE Alu 1 306 -6 2589 56 0 0 chr18 27615729 27616032 -58372902 + AluY SINE Alu 1 303 -8 777 200 0 0 chr18 27616515 27616655 -58372279 + FLAM_C SINE Alu 1 140 -3 1821 167 33 0 chr18 27616752 27617052 -58371882 + AluSx SINE Alu 1 310 -2 183 323 54 21 chr18 27617420 27617513 -58371421 - L2 LINE L2 -881 2433 2338 226 288 0 0 chr18 27617536 27617602 -58371332 + L1ME LINE L1 5383 5448 -673 431 306 89 39 chr18 27617681 27617939 -58370995 + L1ME LINE L1 5545 5815 -306 25 0 0 0 chr18 27618584 27618609 -58370325 + AT_rich Low_complexity Low_complexity 1 25 0 242 200 0 0 chr18 27618619 27618659 -58370275 + Alu SINE Alu 2 41 -258 1096 191 23 2 chr18 27618711 27618988 -58369946 - MER2 DNA MER2_type 0 345 1 430 292 44 37 chr18 27619190 27619488 -58369446 + L1ME4a LINE L1 5588 5887 -234 3051 228 14 3 chr18 27619529 27620174 -58368760 + MER82 DNA MER2_type 2 653 0 29 28 0 0 chr18 27620876 27620912 -58368022 + AT_rich Low_complexity Low_complexity 1 36 0 228 67 0 0 chr18 27621219 27621249 -58367685 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 1263 256 94 31 chr18 27621308 27621797 -58367137 + MLT2B1 LTR ERVL 1 520 0 417 181 3 36 chr18 27624359 27624700 -58364234 + (TA)n Simple_repeat Simple_repeat 1 329 0 193 114 0 45 chr18 27624699 27624743 -58364191 + (CA)n Simple_repeat Simple_repeat 2 43 0 * 2666 62 3 3 chr18 27624757 27625096 -58363838 - L1PA7 LINE L1 -29 6125 5787 418 45 15 15 chr18 27625919 27625985 -58362949 + (TCTA)n Simple_repeat Simple_repeat 1 66 0 581 304 25 0 chr18 27626242 27626430 -58362504 + MIR3 SINE MIR 13 205 -3 29 28 0 0 chr18 27626789 27626825 -58362109 + AT_rich Low_complexity Low_complexity 1 36 0 2150 129 0 0 chr18 27627365 27627667 -58361267 + AluSx SINE Alu 1 302 -10 24 0 0 0 chr18 27628437 27628461 -58360473 + AT_rich Low_complexity Low_complexity 1 24 0 186 133 0 0 chr18 27629089 27629119 -58359815 + (GAAAA)n Simple_repeat Simple_repeat 1 30 0 190 353 25 33 chr18 27632015 27632137 -58356797 - MIR3 SINE MIR -82 126 6 208 269 64 26 chr18 27632712 27632790 -58356144 - MIR3 SINE MIR -19 189 109 240 338 35 71 chr18 27632871 27633069 -58355865 + MIR3 SINE MIR 13 203 -5 207 0 0 0 chr18 27633935 27633958 -58354976 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1025 146 49 15 chr18 27634365 27634570 -58354364 - Charlie5 DNA MER1_type 0 2614 2403 319 213 0 0 chr18 27634575 27634636 -58354298 - Charlie5 DNA MER1_type -2550 62 2 1700 118 72 13 chr18 27635272 27635576 -58353358 + L1MA5A LINE L1 5972 6293 -4 23 0 0 0 chr18 27636121 27636144 -58352790 + AT_rich Low_complexity Low_complexity 1 23 0 941 188 94 15 chr18 27637222 27637424 -58351510 + MER20 DNA MER1_type 2 219 0 317 325 50 45 chr18 27638936 27639136 -58349798 - MIR3 SINE MIR -6 202 2 207 0 0 0 chr18 27639821 27639844 -58349090 + (TG)n Simple_repeat Simple_repeat 1 23 0 1067 282 96 34 chr18 27640887 27641358 -58347576 + MLT1J LTR MaLR 10 509 -2 254 284 74 43 chr18 27642504 27642666 -58346268 + L2 LINE L2 1854 2020 -1294 188 217 205 36 chr18 27642864 27642947 -58345987 - L2 LINE L2 -1 3271 3175 201 309 40 91 chr18 27643217 27643392 -58345542 + L2 LINE L2 2362 2527 -787 * 256 338 15 0 chr18 27643390 27643458 -58345476 + L2 LINE L2 2990 3058 -214 210 271 29 14 chr18 27643775 27643845 -58345089 + MIR3 SINE MIR 136 206 -2 22 35 0 0 chr18 27644367 27644396 -58344538 + AT_rich Low_complexity Low_complexity 1 29 0 248 288 14 14 chr18 27646387 27646460 -58342474 - Tigger5 DNA MER2_type 0 2323 2251 * 251 211 39 0 chr18 27646431 27646483 -58342451 - Tigger5 DNA MER2_type -2269 54 1 501 291 21 0 chr18 27646877 27647018 -58341916 - MIR SINE MIR -1 261 118 227 340 72 20 chr18 27647619 27647772 -58341162 + MIR SINE MIR 66 226 -36 211 324 204 0 chr18 27647937 27648045 -58340889 - L2 LINE L2 -14 3258 3129 1417 156 74 42 chr18 27649640 27649923 -58339011 + AluJb SINE Alu 5 296 -16 1319 184 0 4 chr18 27650779 27651007 -58337927 + AluJo SINE Alu 12 238 -74 29 0 0 0 chr18 27651027 27651056 -58337878 + AT_rich Low_complexity Low_complexity 1 29 0 310 298 146 28 chr18 27651204 27651382 -58337552 + MIR SINE MIR 59 257 -5 225 0 0 0 chr18 27652906 27652931 -58336003 + (TG)n Simple_repeat Simple_repeat 1 25 0 246 241 86 0 chr18 27653179 27653237 -58335697 - L2 LINE L2 -41 3272 3210 539 292 11 11 chr18 27653432 27653617 -58335317 - MLT1L LTR MaLR -2 613 429 203 275 22 33 chr18 27653673 27653764 -58335170 + GA-rich Low_complexity Low_complexity 4 93 0 204 351 13 26 chr18 27654393 27654470 -58334464 + MIR SINE MIR 69 144 -118 2413 82 3 0 chr18 27654525 27654831 -58334103 + AluY SINE Alu 1 307 -4 1278 214 82 11 chr18 27655100 27655381 -58333553 + AluJo SINE Alu 1 301 -1 626 140 132 0 chr18 27655382 27655496 -58333438 + AluSc SINE Alu 170 298 -11 1607 189 3 7 chr18 27655663 27655954 -58332980 + AluJb SINE Alu 13 302 -10 393 213 128 43 chr18 27658046 27658187 -58330747 + MER5A DNA MER1_type 37 189 0 315 0 0 0 chr18 27658799 27658834 -58330100 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 28 71 0 0 chr18 27658962 27659018 -58329916 + AT_rich Low_complexity Low_complexity 1 56 0 219 88 0 0 chr18 27659248 27659282 -58329652 + (TG)n Simple_repeat Simple_repeat 1 34 0 776 286 181 16 chr18 27659469 27659850 -58329084 + L3 LINE CR1 822 1265 -312 272 348 42 0 chr18 27659855 27659973 -58328961 + L2 LINE L2 3191 3313 0 418 269 82 87 chr18 27659997 27660216 -58328718 + L3 LINE CR1 1279 1496 -81 210 213 33 33 chr18 27660372 27660433 -58328501 - MER5A DNA MER1_type -1 188 128 2069 268 126 24 chr18 27660444 27661327 -58327607 + L2 LINE L2 1560 2532 -782 1654 194 66 21 chr18 27661327 27661598 -58327336 + L1MB5 LINE L1 4935 5192 -982 2028 180 14 6 chr18 27661598 27661960 -58326974 + MLT1A1 LTR MaLR 1 365 0 1654 194 66 21 chr18 27661960 27662119 -58326815 + L1MB5 LINE L1 5192 5342 -832 225 65 0 0 chr18 27662119 27662150 -58326784 + (TA)n Simple_repeat Simple_repeat 1 31 0 1654 194 66 21 chr18 27662150 27662432 -58326502 + L1MB5 LINE L1 5342 5680 -494 412 217 43 26 chr18 27662440 27662555 -58326379 + L1MB5 LINE L1 5783 5899 -275 834 226 5 32 chr18 27662560 27662750 -58326184 + L1MB5 LINE L1 5982 6166 -8 782 243 211 41 chr18 27662769 27663335 -58325599 + L2 LINE L2 2538 3195 -118 361 272 19 136 chr18 27664934 27664993 -58323941 + MIR3 SINE MIR 23 87 -121 2880 80 0 4 chr18 27664993 27665400 -58323534 + L1PA8 LINE L1 5768 6171 -1 361 272 19 136 chr18 27665400 27665486 -58323448 + MIR3 SINE MIR 87 165 -43 296 282 40 46 chr18 27665736 27665910 -58323024 + L1ME LINE L1 5610 5782 -339 22 0 0 0 chr18 27668485 27668507 -58320427 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr18 27669462 27669486 -58319448 + AT_rich Low_complexity Low_complexity 1 24 0 295 314 145 0 chr18 27670321 27670528 -58318406 + L1ME LINE L1 5540 5776 -394 216 268 144 0 chr18 27671806 27671903 -58317031 + MIR SINE MIR 100 210 -52 215 219 137 27 chr18 27672232 27672305 -58316629 - MIR SINE MIR -20 242 162 204 339 35 63 chr18 27672402 27672456 -58316478 - L3 LINE CR1 -30 1547 1493 697 166 23 196 chr18 27672456 27672721 -58316213 + MER20 DNA MER1_type 1 219 0 204 339 35 63 chr18 27672721 27672840 -58316094 - L3 LINE CR1 -84 1493 1379 1133 196 62 21 chr18 27673013 27673304 -58315630 - MER58B DNA MER1_type 0 341 39 361 292 45 45 chr18 27673331 27673509 -58315425 - MIR SINE MIR -44 218 41 333 282 274 23 chr18 27673533 27674049 -58314885 - L2 LINE L2 0 3272 2626 493 272 7 48 chr18 27674296 27674443 -58314491 - L2 LINE L2 -202 3070 2930 317 313 17 28 chr18 27674442 27674687 -58314247 - L3 LINE CR1 -627 950 664 * 639 242 126 35 chr18 27674809 27675040 -58313894 + MIR SINE MIR 8 259 -3 266 281 122 55 chr18 27675107 27675271 -58313663 - MER5A DNA MER1_type 0 189 15 707 253 105 31 chr18 27676375 27676604 -58312330 + MIR SINE MIR 16 261 -1 461 292 93 12 chr18 27677300 27677557 -58311377 - Tigger8 DNA MER2_type -241 425 148 642 263 66 15 chr18 27678570 27678768 -58310166 - MIR SINE MIR -10 252 45 2063 174 42 32 chr18 27679825 27680331 -58308603 + Charlie1b DNA MER1_type 3 513 -10 2317 111 0 0 chr18 27680874 27681180 -58307754 - AluSx SINE Alu -6 306 1 2192 115 3 3 chr18 27682521 27682825 -58306109 + AluSx SINE Alu 1 304 -8 573 242 93 41 chr18 27683972 27684166 -58304768 + MIR SINE MIR 52 255 -7 284 298 121 28 chr18 27684383 27684598 -58304336 + L1ME3A LINE L1 5422 5656 -514 529 283 58 0 chr18 27684611 27684749 -58304185 + MER5A DNA MER1_type 42 187 -2 295 342 39 19 chr18 27684612 27684767 -58304167 - MER5A DNA MER1_type -31 158 1 * 545 244 107 15 chr18 27684783 27684988 -58303946 + L1ME3A LINE L1 5682 5905 -265 254 240 0 27 chr18 27684988 27685063 -58303871 + (TA)n Simple_repeat Simple_repeat 1 73 0 316 340 5 64 chr18 27685129 27685332 -58303602 + L1ME3A LINE L1 5972 6162 -8 588 310 130 0 chr18 27685436 27685636 -58303298 + MIR SINE MIR 25 250 -12 255 157 0 0 chr18 27685875 27685926 -58303008 + (CA)n Simple_repeat Simple_repeat 2 52 0 1631 182 0 31 chr18 27686424 27686715 -58302219 - AluJo SINE Alu -30 282 1 718 207 37 92 chr18 27686718 27686935 -58301999 - MIR SINE MIR -38 224 20 192 77 0 0 chr18 27686935 27686961 -58301973 + (T)n Simple_repeat Simple_repeat 1 26 0 216 0 0 0 chr18 27687373 27687397 -58301537 + (TA)n Simple_repeat Simple_repeat 2 25 0 497 251 189 4 chr18 27688733 27688976 -58299958 + L1ME3A LINE L1 5873 6160 -10 211 288 51 0 chr18 27690219 27690278 -58298656 + MIR SINE MIR 112 173 -89 2150 120 0 10 chr18 27691569 27691868 -58297066 - AluY SINE Alu -15 296 1 323 299 22 73 chr18 27691997 27692134 -58296800 - L1MC/D LINE L1 -2025 5783 5654 1909 114 34 20 chr18 27692170 27692467 -58296467 + AluSx SINE Alu 1 301 -11 261 225 0 56 chr18 27692975 27693046 -58295888 - MIR3 SINE MIR -25 183 117 309 51 0 0 chr18 27693300 27693339 -58295595 + (TG)n Simple_repeat Simple_repeat 1 39 0 27 0 0 0 chr18 27693714 27693741 -58295193 + AT_rich Low_complexity Low_complexity 1 27 0 322 319 142 38 chr18 27696695 27696983 -58291951 + L1M2 LINE L1 772 1089 -5760 304 309 144 62 chr18 27696974 27697265 -58291669 + L1MDa LINE L1 623 937 -5603 * 222 37 0 0 chr18 27698047 27698074 -58290860 + (CGCGG)n Simple_repeat Simple_repeat 5 31 0 33 56 0 0 chr18 27698129 27698183 -58290751 + GC_rich Low_complexity Low_complexity 1 54 0 258 125 0 0 chr18 27698281 27698329 -58290605 + (CGG)n Simple_repeat Simple_repeat 2 49 0 186 103 0 0 chr18 27698371 27698400 -58290534 + (TCCCC)n Simple_repeat Simple_repeat 1 29 0 331 288 139 55 chr18 27698990 27699372 -58289562 + L1M2 LINE L1 527 940 -5909 529 241 103 40 chr18 27702280 27702454 -58286480 - MIR3 SINE MIR -3 205 21 219 262 82 0 chr18 27703103 27703164 -58285770 + MIR SINE MIR 77 142 -120 257 376 73 0 chr18 27704060 27704222 -58284712 + MIR SINE MIR 13 141 -67 249 223 139 65 chr18 27705642 27705951 -58282983 - HAL1 LINE L1 -1316 1191 860 243 0 0 0 chr18 27705993 27706020 -58282914 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2090 77 42 3 chr18 27706023 27706308 -58282626 - AluY SINE Alu -15 296 1 2367 104 0 0 chr18 27706959 27707266 -58281668 + AluSc SINE Alu 1 307 -2 1206 101 0 6 chr18 27709696 27709864 -58279070 - AluSg/x SINE Alu -6 306 140 23 0 0 0 chr18 27710256 27710279 -58278655 + AT_rich Low_complexity Low_complexity 1 23 0 2152 105 3 7 chr18 27710344 27710656 -58278278 - AluSx SINE Alu 0 311 1 374 267 155 67 chr18 27711215 27711705 -58277229 - L1 LINE L1 -1314 4832 4300 1839 149 56 0 chr18 27711850 27712138 -58276796 + AluSx SINE Alu 1 304 -8 42 57 0 0 chr18 27712248 27712318 -58276616 + AT_rich Low_complexity Low_complexity 1 70 0 307 319 57 0 chr18 27712356 27712497 -58276437 - L1 LINE L1 -2204 3942 3794 1491 204 52 105 chr18 27713132 27713675 -58275259 - LTR40a LTR ERVL 0 519 6 2312 106 0 0 chr18 27714140 27714433 -58274501 - AluSg SINE Alu -17 293 1 1972 164 0 0 chr18 27714496 27714800 -58274134 - AluJb SINE Alu -8 304 1 2089 118 0 48 chr18 27715369 27715684 -58273250 + AluSx SINE Alu 1 300 -12 486 145 0 0 chr18 27715692 27715768 -58273166 - AluJb SINE Alu -35 277 202 1114 229 64 20 chr18 27716012 27716370 -58272564 - MLT1B LTR MaLR -15 375 2 437 378 59 23 chr18 27716370 27716677 -58272257 + L2 LINE L2 2925 3242 -30 21 0 0 0 chr18 27717216 27717237 -58271697 + AT_rich Low_complexity Low_complexity 1 21 0 2383 82 0 0 chr18 27717848 27718142 -58270792 - AluY SINE Alu -17 294 1 750 131 0 0 chr18 27718316 27718423 -58270511 + FLAM_C SINE Alu 1 107 -36 2135 152 5 14 chr18 27718487 27718856 -58270078 + MER47A DNA MER2_type 1 366 0 25 65 0 0 chr18 27719725 27719771 -58269163 + AT_rich Low_complexity Low_complexity 1 46 0 2080 131 0 3 chr18 27721633 27721924 -58267010 + AluSx SINE Alu 1 290 -22 882 169 68 0 chr18 27722379 27722556 -58266378 - MER5A DNA MER1_type 0 189 1 848 160 0 0 chr18 27723035 27723166 -58265768 - FLAM_C SINE Alu -1 132 2 857 299 73 48 chr18 27724593 27724809 -58264125 - ERVL LTR ERVL -2990 2774 2565 2359 82 3 0 chr18 27724809 27725101 -58263833 - AluSp SINE Alu -20 293 1 857 299 73 48 chr18 27725101 27725503 -58263431 - ERVL LTR ERVL -3199 2565 2141 404 363 39 22 chr18 27726115 27726575 -58262359 - ERVL LTR ERVL -4495 1269 802 40 49 0 0 chr18 27726986 27727047 -58261887 + AT_rich Low_complexity Low_complexity 1 61 0 2318 100 0 23 chr18 27727116 27727426 -58261508 - AluSx SINE Alu -9 303 1 5443 99 20 20 chr18 27727692 27728576 -58260358 - L1PA13 LINE L1 0 6163 5280 2209 186 38 19 chr18 27728584 27729107 -58259827 - L1P LINE L1 -2497 3649 3117 2180 171 26 40 chr18 27729183 27729610 -58259324 + MSTB LTR MaLR 1 421 -5 1360 131 58 8 chr18 27729615 27729874 -58259060 + MSTB-int LTR MaLR 1 272 -1379 1085 105 17 33 chr18 27729874 27730055 -58258879 + LTR9 LTR ERV1 1 178 -434 2477 127 34 5 chr18 27730064 27730451 -58258483 - MER48 LTR ERV1 0 398 1 12613 87 20 4 chr18 27730451 27732253 -58256681 - HERVH48 LTR ERV1 0 6654 4825 3520 107 21 1 chr18 27732263 27733322 -58255612 - HERVH48 LTR ERV1 -2429 4225 3112 1582 184 68 0 chr18 27733401 27733737 -58255197 - L1MA6 LINE L1 0 6300 5942 189 167 0 0 chr18 27734307 27734343 -58254591 + L2 LINE L2 3277 3312 -1 207 0 0 0 chr18 27734361 27734384 -58254550 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5818 50 7 0 chr18 27734384 27735108 -58253826 - L1PA7 LINE L1 -11 6143 5415 255 263 0 26 chr18 27736297 27736373 -58252561 - MLT1K LTR MaLR -49 539 466 21 0 0 0 chr18 27738043 27738064 -58250870 + AT_rich Low_complexity Low_complexity 1 21 0 234 330 98 51 chr18 27738281 27738496 -58250438 - MIR SINE MIR -32 230 6 410 223 16 75 chr18 27738642 27738830 -58250104 + MER104 DNA Tc2 4 180 0 332 244 92 23 chr18 27739536 27739667 -58249267 + MIR SINE MIR 123 262 0 651 309 76 13 chr18 27739931 27740167 -58248767 + MIR SINE MIR 9 259 -3 206 371 73 0 chr18 27740204 27740355 -58248579 + MIR SINE MIR 89 250 -12 1835 106 0 8 chr18 27741812 27742058 -58246876 + AluSx SINE Alu 59 302 -10 17532 67 5 0 chr18 27743202 27746316 -58242618 - L1PA6 LINE L1 -1 6153 3026 7631 26 2 2 chr18 27746319 27747568 -58241366 - L1PA3 LINE L1 -3 6152 4904 11990 93 7 3 chr18 27747568 27749367 -58239567 - L1PA6 LINE L1 -3114 3032 1227 4881 172 28 2 chr18 27749417 27750351 -58238583 - L1PA6 LINE L1 -5184 962 5 1595 174 76 22 chr18 27751404 27751760 -58237174 + THE1C LTR MaLR 1 375 0 1729 36 0 32 chr18 27751841 27752061 -58236873 + L1PA3 LINE L1 5940 6152 -3 22 0 0 0 chr18 27753305 27753327 -58235607 + AT_rich Low_complexity Low_complexity 1 22 0 276 149 0 0 chr18 27753454 27753501 -58235433 + (TG)n Simple_repeat Simple_repeat 2 48 0 25 0 0 0 chr18 27753501 27753526 -58235408 + AT_rich Low_complexity Low_complexity 1 25 0 2237 223 65 27 chr18 27753658 27754654 -58234280 + L1ME1 LINE L1 5083 6120 -46 450 255 13 7 chr18 27754555 27754704 -58234230 + L1MA10 LINE L1 6181 6330 -4 * 9180 94 19 7 chr18 27754713 27755985 -58232949 - HSMAR1 DNA Mariner 0 1287 1 31 44 0 0 chr18 27756041 27756086 -58232848 + AT_rich Low_complexity Low_complexity 1 45 0 1891 129 46 20 chr18 27756323 27756440 -58232494 + AluSg SINE Alu 1 113 -197 180 0 0 0 chr18 27756440 27756460 -58232474 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1891 129 46 20 chr18 27756460 27756644 -58232290 + AluSg SINE Alu 113 310 0 23 68 0 0 chr18 27756747 27756791 -58232143 + AT_rich Low_complexity Low_complexity 1 44 0 273 163 0 0 chr18 27756914 27756963 -58231971 + CT-rich Low_complexity Low_complexity 2 50 0 296 294 255 0 chr18 27757563 27757716 -58231218 + MIR SINE MIR 71 262 0 21 0 0 0 chr18 27758364 27758385 -58230549 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr18 27758554 27758592 -58230342 + AT_rich Low_complexity Low_complexity 1 38 0 190 412 8 0 chr18 27759294 27759425 -58229509 - L2 LINE L2 -707 2607 2476 290 337 0 0 chr18 27759427 27759516 -58229418 - L2 LINE L2 -982 2332 2244 328 253 167 49 chr18 27759637 27759806 -58229128 + MIR SINE MIR 28 220 -42 2243 146 46 38 chr18 27759806 27760259 -58228675 - MSTB2 LTR MaLR 0 457 1 328 253 167 49 chr18 27760259 27760291 -58228643 + MIR SINE MIR 220 247 -15 37 23 0 0 chr18 27760331 27760375 -58228559 + AT_rich Low_complexity Low_complexity 1 44 0 800 172 218 64 chr18 27760459 27760785 -58228149 + LTR37A LTR ERV1 51 426 0 2306 101 0 0 chr18 27760986 27761292 -58227642 - AluSg SINE Alu -4 306 1 308 255 32 0 chr18 27761376 27761470 -58227464 + MER103 DNA DNA 11 107 -59 378 61 0 0 chr18 27761470 27761519 -58227415 + (CA)n Simple_repeat Simple_repeat 2 50 0 38461 36 20 1 chr18 27761667 27767707 -58221227 + L1PA3 LINE L1 2 6155 0 297 0 0 0 chr18 27768328 27768361 -58220573 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 1306 183 15 30 chr18 27768361 27768624 -58220310 - AluJo SINE Alu -51 261 3 2902 13 0 0 chr18 27769151 27769469 -58219465 - AluYb8 SINE Alu 0 318 1 1501 180 10 21 chr18 27769561 27769850 -58219084 + AluJo SINE Alu 1 286 -26 4571 136 80 34 chr18 27769883 27770694 -58218240 - MER49 LTR ERV1 0 923 67 432 0 0 0 chr18 27770694 27770742 -58218192 + (TG)n Simple_repeat Simple_repeat 2 49 0 4571 136 80 34 chr18 27770742 27770811 -58218123 - MER49 LTR ERV1 -856 67 3 1063 315 74 32 chr18 27771278 27771776 -58217158 + LTR33 LTR ERVL 1 519 -2 201 200 20 0 chr18 27771996 27772046 -58216888 + (TAA)n Simple_repeat Simple_repeat 3 53 0 22 0 0 0 chr18 27772767 27772789 -58216145 + AT_rich Low_complexity Low_complexity 1 22 0 2105 146 120 8 chr18 27774253 27774636 -58214298 + MSTA LTR MaLR 1 426 -2 1720 184 0 0 chr18 27774637 27774914 -58214020 - AluJb SINE Alu -33 279 3 3572 104 35 0 chr18 27774967 27775504 -58213430 - L1PA8A LINE L1 -2 6129 5574 2914 98 8 0 chr18 27775504 27776098 -58212836 + L1PA8A LINE L1 4960 5556 -575 23 0 0 0 chr18 27776779 27776802 -58212132 + AT_rich Low_complexity Low_complexity 1 23 0 434 282 51 32 chr18 27777018 27777174 -58211760 - MIR SINE MIR -93 169 11 217 314 211 41 chr18 27778791 27779399 -58209535 - L2 LINE L2 -1051 2263 1553 756 314 59 57 chr18 27779490 27779932 -58209002 + L2 LINE L2 2233 2675 -639 294 368 44 54 chr18 27780168 27780464 -58208470 + L2 LINE L2 2980 3272 0 1758 177 0 7 chr18 27780754 27781037 -58207897 + L1M2 LINE L1 1 281 -6568 * 3095 143 34 4 chr18 27781035 27781593 -58207341 + L1MA4A LINE L1 5254 5828 -475 1620 48 5 5 chr18 27781593 27781798 -58207136 + L1PA7 LINE L1 5940 6147 -7 2902 102 20 35 chr18 27781827 27782318 -58206616 + L1MA4A LINE L1 5814 6297 -6 2506 64 0 6 chr18 27784073 27784385 -58204549 - AluY SINE Alu -1 310 1 504 235 68 0 chr18 27785472 27785604 -58203330 + MER103 DNA DNA 9 149 -17 6231 106 11 0 chr18 27785630 27786660 -58202274 - L1PA10 LINE L1 -2 6166 5128 23 78 0 0 chr18 27787433 27787484 -58201450 + AT_rich Low_complexity Low_complexity 1 51 0 768 289 109 53 chr18 27789174 27789551 -58199383 + MLT1J LTR MaLR 110 507 -4 388 215 18 11 chr18 27791196 27791325 -58197609 + MER5A DNA MER1_type 4 189 0 5860 201 74 16 chr18 27791938 27793154 -58195780 - L1 LINE L1 -958 5188 3867 1032 71 7 0 chr18 27793154 27793294 -58195640 - L1PB1 LINE L1 0 6151 6011 5860 201 74 16 chr18 27793294 27793570 -58195364 - L1 LINE L1 -2279 3867 3609 5195 141 40 50 chr18 27793669 27793776 -58195158 + L1MA9 LINE L1 5188 5295 -1017 207 0 0 0 chr18 27793776 27793799 -58195135 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 5195 141 40 50 chr18 27793799 27794125 -58194809 + L1MA9 LINE L1 5295 5623 -689 1806 165 7 3 chr18 27794125 27794422 -58194512 + AluSx SINE Alu 1 298 -14 5195 141 40 50 chr18 27794422 27794622 -58194312 + L1MA9 LINE L1 5623 5824 -488 303 28 0 0 chr18 27794622 27794658 -58194276 + (CA)n Simple_repeat Simple_repeat 2 37 0 5195 141 40 50 chr18 27794658 27795156 -58193778 + L1MA9 LINE L1 5824 6312 0 2146 112 6 10 chr18 27795275 27795588 -58193346 - AluSq SINE Alu -1 312 1 357 289 114 49 chr18 27795725 27795988 -58192946 - HAL1 LINE L1 -2 2505 2226 1633 165 0 15 chr18 27796155 27796427 -58192507 - AluJo SINE Alu -10 302 35 1835 124 6 48 chr18 27796726 27797040 -58191894 - AluSx SINE Alu 0 312 12 795 283 127 44 chr18 27797331 27797897 -58191037 - HAL1 LINE L1 -697 1810 1198 1470 246 98 42 chr18 27797922 27798541 -58190393 + MLT1E1 LTR MaLR 1 654 0 286 261 96 47 chr18 27798541 27798863 -58190071 - HAL1 LINE L1 -1344 1163 826 280 286 0 0 chr18 27799280 27799343 -58189591 + polypyrimidine Low_complexity Low_complexity 4 66 0 2931 134 11 35 chr18 27799503 27799548 -58189386 - L1MA9 LINE L1 0 6312 6267 1897 146 20 3 chr18 27799548 27799850 -58189084 - AluSx SINE Alu -5 307 1 2931 134 11 35 chr18 27799850 27799951 -58188983 - L1MA9 LINE L1 -45 6267 6165 2302 138 22 0 chr18 27799951 27800307 -58188627 + THE1B LTR MaLR 1 364 0 2931 134 11 35 chr18 27800307 27800697 -58188237 - L1MA9 LINE L1 -147 6165 5788 259 189 14 14 chr18 27800726 27800800 -58188134 + (TA)n Simple_repeat Simple_repeat 1 74 0 21 0 0 0 chr18 27800804 27800825 -58188109 + AT_rich Low_complexity Low_complexity 1 21 0 237 178 0 0 chr18 27800853 27800898 -58188036 - L1MC4 LINE L1 -1340 6702 6658 21 0 0 0 chr18 27800921 27800942 -58187992 + AT_rich Low_complexity Low_complexity 1 21 0 315 0 0 0 chr18 27800953 27800988 -58187946 + (TG)n Simple_repeat Simple_repeat 2 36 0 2427 145 17 68 chr18 27800988 27801457 -58187477 - Tigger2 DNA MER2_type -1 2717 2273 246 254 15 15 chr18 27801447 27801514 -58187420 - Tigger2 DNA MER2_type -2650 68 2 * 648 251 17 6 chr18 27801782 27801957 -58186977 + MLT1K LTR MaLR 405 581 -7 8173 166 152 12 chr18 27802553 27804099 -58184835 + L1PA15-16 LINE L1 2 1763 -5086 1922 146 10 7 chr18 27804714 27805022 -58183912 - Tigger3b DNA MER2_type 0 1231 923 1970 167 46 31 chr18 27805022 27805576 -58183358 + MLT2A2 LTR ERVL 1 554 0 4938 142 41 12 chr18 27805578 27806477 -58182457 - Tigger3b DNA MER2_type -306 925 1 2417 54 0 35 chr18 27806666 27806980 -58181954 - AluY SINE Alu -8 303 1 2303 56 0 0 chr18 27807683 27807969 -58180965 + L1PA7 LINE L1 5861 6146 -8 24 0 0 0 chr18 27807969 27807993 -58180941 + AT_rich Low_complexity Low_complexity 1 24 0 26 88 0 0 chr18 27808818 27808886 -58180048 + AT_rich Low_complexity Low_complexity 1 68 0 1455 200 77 6 chr18 27809889 27810214 -58178720 - MER7A DNA MER2_type 0 346 1 264 333 0 0 chr18 27810520 27810616 -58178318 + L1M4c LINE L1 1470 1565 -4819 908 279 19 24 chr18 27810738 27811150 -58177784 + L1M4c LINE L1 2127 2536 -4027 1691 254 87 35 chr18 27811151 27811715 -58177219 + MLT1E LTR MaLR 1 593 0 2237 195 33 18 chr18 27811737 27812188 -58176746 - MLT1C LTR MaLR 0 467 10 1267 246 37 9 chr18 27812199 27812654 -58176280 + MLT1E-int LTR MaLR 21 605 -766 232 316 131 24 chr18 27812699 27812867 -58176067 + MLT1K LTR MaLR 283 468 -120 2152 120 0 19 chr18 27814128 27814436 -58174498 + AluSp SINE Alu 1 302 -11 19681 100 63 53 chr18 27815125 27821195 -58167739 - L1PA4 LINE L1 0 6155 12 274 354 0 0 chr18 27821209 27821291 -58167643 - L2 LINE L2 -43 3270 3189 328 295 122 7 chr18 27821622 27821761 -58167173 - MIR SINE MIR -61 201 47 5141 212 26 7 chr18 27821924 27823786 -58165148 + L1MC1 LINE L1 4419 6315 -18 4987 215 18 57 chr18 27824113 27824339 -58164595 + L1PB4 LINE L1 2036 2269 -3877 297 0 0 0 chr18 27824339 27824372 -58164562 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 6971 157 15 43 chr18 27824380 27826582 -58162352 - L1PA12 LINE L1 -11 6157 3990 4987 215 18 57 chr18 27826582 27827518 -58161416 + L1PB4 LINE L1 2276 3104 -3042 1863 87 7 63 chr18 27827518 27827804 -58161130 + AluY SINE Alu 41 310 -1 4987 215 18 57 chr18 27827804 27828272 -58160662 + L1PB4 LINE L1 3104 3589 -2557 * 5039 78 8 8 chr18 27828271 27828934 -58160000 + THE1B-int LTR MaLR 917 1579 -1 2146 128 72 17 chr18 27828935 27829280 -58159654 + THE1B LTR MaLR 1 364 0 4131 176 22 50 chr18 27829280 27829851 -58159083 + L1PB4 LINE L1 4817 5403 -753 8276 185 22 5 chr18 27829851 27832225 -58156709 + L1PA13 LINE L1 3763 6157 -6 4131 176 22 50 chr18 27832225 27832617 -58156317 + L1PB4 LINE L1 5403 5734 -422 336 24 0 0 chr18 27832617 27832658 -58156276 + (TG)n Simple_repeat Simple_repeat 2 42 0 4131 176 22 50 chr18 27832658 27833064 -58155870 + L1PB4 LINE L1 5734 6150 -6 24 67 0 0 chr18 27833095 27833140 -58155794 + AT_rich Low_complexity Low_complexity 1 45 0 328 388 29 12 chr18 27833500 27833670 -58155264 - MIR SINE MIR -62 200 28 386 36 36 0 chr18 27834598 27834653 -58154281 + (CATATA)n Simple_repeat Simple_repeat 5 61 0 299 352 74 0 chr18 27834927 27835035 -58153899 + L2 LINE L2 3147 3262 -10 610 279 50 25 chr18 27835165 27835366 -58153568 + MIR SINE MIR 20 225 -37 237 220 0 0 chr18 27835958 27836008 -58152926 + MLT1J LTR MaLR 3 52 -459 238 250 56 9 chr18 27836082 27836190 -58152744 + MLT1J LTR MaLR 79 191 -320 343 209 45 82 chr18 27837016 27837072 -58151862 - MLT1J1 LTR MaLR 0 446 389 2824 170 75 72 chr18 27837072 27837714 -58151220 + MER73 LTR ERVL 1 644 0 343 209 45 82 chr18 27837714 27837791 -58151143 - MLT1J1 LTR MaLR -57 389 318 467 236 23 132 chr18 27837818 27838076 -58150858 + MIR SINE MIR 32 261 -1 385 311 60 76 chr18 27838482 27838797 -58150137 - L2 LINE L2 -5 3308 2999 1945 185 11 17 chr18 27838799 27839156 -58149778 + MLT1A1 LTR MaLR 3 357 -8 233 328 0 0 chr18 27839195 27839262 -58149672 - L2 LINE L2 -337 2977 2911 191 176 0 0 chr18 27839261 27839295 -58149639 + MIR SINE MIR 159 192 -70 * 927 287 88 9 chr18 27839317 27839658 -58149276 + LTR16A LTR ERVL 3 370 -80 250 322 63 23 chr18 27839769 27839943 -58148991 + MIR SINE MIR 49 229 -33 2380 264 103 22 chr18 27840048 27840675 -58148259 - L1ME3A LINE L1 0 6564 5989 198 0 0 0 chr18 27840675 27840697 -58148237 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 2286 107 7 0 chr18 27840707 27841015 -58147919 + AluSx SINE Alu 1 310 -2 2380 264 103 22 chr18 27841015 27842526 -58146408 - L1ME3A LINE L1 -583 5981 4235 1239 272 69 36 chr18 27842772 27843540 -58145394 - L1ME3A LINE L1 -3175 3365 2573 423 271 94 62 chr18 27843573 27843817 -58145117 - L1ME3A LINE L1 -4117 2604 2353 316 254 112 78 chr18 27844193 27844767 -58144167 - L1MDa LINE L1 -4763 1958 1327 182 308 82 63 chr18 27845075 27845234 -58143700 - L2 LINE L2 -15 3298 3137 238 436 43 6 chr18 27846122 27846285 -58142649 - L2 LINE L2 0 3272 3104 302 301 70 50 chr18 27846631 27846830 -58142104 - MLT1L LTR MaLR -290 325 123 27 0 0 0 chr18 27847478 27847505 -58141429 + AT_rich Low_complexity Low_complexity 1 27 0 1372 226 85 42 chr18 27848127 27848574 -58140360 + MER21B LTR ERV1 387 852 -11 2236 98 0 7 chr18 27849735 27850030 -58138904 - AluSx SINE Alu -19 293 1 882 130 48 0 chr18 27850960 27851106 -58137828 - L1MC1 LINE L1 -146 6187 6035 4539 149 22 5 chr18 27851290 27852048 -58136886 - L1MC1 LINE L1 -27 6306 5536 1803 262 65 5 chr18 27852120 27852738 -58136196 - L1M4 LINE L1 -1395 4751 4097 733 266 86 23 chr18 27853285 27853589 -58135345 + Charlie2 DNA MER1_type 8 330 -2532 * 1971 208 177 22 chr18 27853580 27853835 -58135099 + Charlie2 DNA MER1_type 1856 2070 -792 2761 116 14 2 chr18 27853835 27854258 -58134676 - MER57B LTR ERV1 -4 430 3 1971 208 177 22 chr18 27854258 27854868 -58134066 + Charlie2 DNA MER1_type 2070 2855 -7 30 27 0 0 chr18 27854912 27854949 -58133985 + AT_rich Low_complexity Low_complexity 1 37 0 1835 196 27 0 chr18 27855143 27855180 -58133754 + L1 LINE L1 4364 4399 -1747 207 0 0 0 chr18 27855180 27855203 -58133731 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1835 196 27 0 chr18 27855203 27855578 -58133356 + L1 LINE L1 4399 4787 -1359 355 273 207 47 chr18 27855578 27855853 -58133081 - L3 LINE CR1 -730 847 529 1754 161 21 7 chr18 27856225 27856510 -58132424 - AluJo SINE Alu -19 293 5 228 221 65 13 chr18 27857893 27857970 -58130964 + MLT1L LTR MaLR 517 597 -18 342 0 0 0 chr18 27858567 27858605 -58130329 + (CA)n Simple_repeat Simple_repeat 2 39 0 6040 104 20 7 chr18 27858633 27859981 -58128953 - L1PA11 LINE L1 0 6174 4808 337 323 53 53 chr18 27860005 27860342 -58128592 + L1ME LINE L1 5483 5819 -302 4055 150 28 11 chr18 27860469 27861191 -58127743 - L1MC3 LINE L1 -166 7619 6886 7689 184 28 21 chr18 27861194 27862585 -58126349 - L1PA16 LINE L1 -1 6165 4746 1617 98 27 0 chr18 27862585 27862809 -58126125 - MER30 DNA MER1_type 0 230 1 7689 184 28 21 chr18 27862809 27864046 -58124888 - L1PA16 LINE L1 -1420 4746 3520 180 0 0 0 chr18 27865380 27865400 -58123534 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1540 209 24 30 chr18 27865580 27865953 -58122981 + MLT1A2 LTR MaLR 2 372 -2 964 258 50 53 chr18 27865998 27866521 -58122413 + LTR33 LTR ERVL 1 521 0 255 308 10 19 chr18 27867917 27868021 -58120913 - L2 LINE L2 -590 2724 2622 1974 150 134 8 chr18 27868048 27868428 -58120506 - MSTA LTR MaLR 0 428 1 279 0 0 0 chr18 27869113 27869144 -58119790 + (CAAT)n Simple_repeat Simple_repeat 3 33 0 226 266 122 36 chr18 27869276 27869415 -58119519 - MIR SINE MIR -16 246 96 21 36 0 0 chr18 27870621 27870649 -58118285 + AT_rich Low_complexity Low_complexity 1 28 0 2267 61 0 3 chr18 27873204 27873498 -58115436 + L1PA4 LINE L1 5861 6153 -2 3339 102 10 23 chr18 27874103 27874582 -58114352 - MER1A DNA MER1_type 0 529 57 246 216 232 24 chr18 27874698 27874823 -58114111 + MER5A DNA MER1_type 37 187 -2 * 470 192 20 10 chr18 27874728 27874827 -58114107 - MER5A DNA MER1_type -77 112 13 195 325 94 26 chr18 27875638 27875755 -58113179 + MER5A DNA MER1_type 20 144 -45 868 204 17 0 chr18 27877496 27877672 -58111262 - MER3 DNA MER1_type -30 179 1 237 33 0 0 chr18 27878218 27878248 -58110686 + (A)n Simple_repeat Simple_repeat 1 30 0 913 193 6 0 chr18 27878377 27878548 -58110386 - MER4D LTR ERV1 -10 893 722 569 161 0 0 chr18 27878549 27878642 -58110292 + AluJ/FLAM SINE Alu 1 93 -219 641 186 0 0 chr18 27878648 27878766 -58110168 + AluSg/x SINE Alu 192 309 -1 2131 170 32 101 chr18 27878766 27879389 -58109545 - MER4D LTR ERV1 -163 616 62 1200 179 107 27 chr18 27879382 27879469 -58109465 - MER49 LTR ERV1 -639 284 205 * 1510 242 47 86 chr18 27879469 27880106 -58108828 - LTR9 LTR ERV1 0 612 1 1200 179 107 27 chr18 27880106 27880281 -58108653 - MER49 LTR ERV1 -718 205 1 2984 168 29 78 chr18 27880791 27880982 -58107952 + LTR8 LTR ERV1 1 200 -491 258 32 0 0 chr18 27880982 27881013 -58107921 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2984 168 29 78 chr18 27881013 27881548 -58107386 + LTR8 LTR ERV1 200 691 0 2589 181 48 22 chr18 27881562 27882142 -58106792 + LTR49 LTR ERV1 1 595 0 22 0 0 0 chr18 27883465 27883487 -58105447 + AT_rich Low_complexity Low_complexity 1 22 0 269 224 144 0 chr18 27883850 27883975 -58104959 + L1MC/D LINE L1 3106 3248 -2898 314 255 107 29 chr18 27884260 27884587 -58104347 + L1MC/D LINE L1 5122 5475 -757 225 241 19 9 chr18 27884742 27884850 -58104084 + (TA)n Simple_repeat Simple_repeat 1 109 0 325 314 0 0 chr18 27885438 27885543 -58103391 - L1ME LINE L1 -508 5613 5509 23 0 0 0 chr18 27885600 27885623 -58103311 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr18 27885797 27885836 -58103098 + AT_rich Low_complexity Low_complexity 1 39 0 287 335 46 9 chr18 27885846 27886064 -58102870 - L1MC4 LINE L1 -55 7987 7762 534 361 121 0 chr18 27886090 27886403 -58102531 + LTR33 LTR ERVL 18 368 -153 255 61 0 0 chr18 27886590 27886623 -58102311 + (TA)n Simple_repeat Simple_repeat 1 33 0 2149 118 0 20 chr18 27886623 27886922 -58102012 - AluSx SINE Alu -17 295 3 2145 128 7 0 chr18 27887093 27887398 -58101536 - AluSx SINE Alu -5 307 1 23 0 0 0 chr18 27887712 27887735 -58101199 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr18 27887826 27887847 -58101087 + AT_rich Low_complexity Low_complexity 1 21 0 885 171 29 120 chr18 27887892 27888167 -58100767 + MLT1F1 LTR MaLR 3 252 -315 353 338 25 20 chr18 27888415 27888616 -58100318 + HERV16 LTR ERVL 4494 4695 -301 717 335 19 25 chr18 27888974 27889341 -58099593 + LTR16B LTR ERVL 47 411 -53 858 227 92 5 chr18 27889532 27889717 -58099217 - MER58A DNA MER1_type -4 220 20 260 320 95 31 chr18 27889836 27890320 -58098614 - HAL1b LINE L1 -498 850 336 2561 149 35 7 chr18 27890686 27891114 -58097820 + MER83 LTR ERV1 1 440 -8 1055 244 121 16 chr18 27892141 27892448 -58096486 + LTR16B LTR ERVL 1 339 -125 2106 120 13 3 chr18 27894082 27894391 -58094543 - AluSq SINE Alu -1 312 1 22 0 0 0 chr18 27894668 27894690 -58094244 + AT_rich Low_complexity Low_complexity 1 22 0 2223 101 3 3 chr18 27896759 27897056 -58091878 - AluSg1 SINE Alu -12 297 1 728 326 175 27 chr18 27897201 27897823 -58091111 + L3 LINE CR1 270 983 -594 482 283 100 22 chr18 27898069 27898249 -58090685 - MIR SINE MIR -63 199 6 299 279 94 64 chr18 27898475 27898772 -58090162 + L2 LINE L2 3008 3313 0 687 312 61 8 chr18 27899290 27899537 -58089397 + MIR SINE MIR 2 261 -1 292 267 35 35 chr18 27899639 27899725 -58089209 + MIR SINE MIR 63 148 -114 211 356 9 26 chr18 27900798 27900913 -58088021 - L3 LINE CR1 -623 954 842 348 64 0 0 chr18 27901110 27901157 -58087777 + (CA)n Simple_repeat Simple_repeat 2 48 0 258 56 0 0 chr18 27903121 27903157 -58085777 + (TG)n Simple_repeat Simple_repeat 2 37 0 23 0 0 0 chr18 27903357 27903380 -58085554 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr18 27903420 27903455 -58085479 + AT_rich Low_complexity Low_complexity 1 35 0 1997 334 78 30 chr18 27905480 27906751 -58082183 + L2 LINE L2 79 1410 -1904 762 296 34 13 chr18 27906955 27907188 -58081746 + LTR16A LTR ERVL 207 444 -6 643 273 38 49 chr18 27907194 27907458 -58081476 + HERV16 LTR ERVL 1 261 -4735 279 359 46 10 chr18 27907553 27907748 -58081186 + HERV16 LTR ERVL 1248 1449 -3547 434 306 27 27 chr18 27907794 27907941 -58080993 + L2 LINE L2 3163 3309 -4 12926 167 25 19 chr18 27908646 27909230 -58079704 + L1M4c LINE L1 2 581 -5801 1889 119 4 0 chr18 27909230 27909483 -58079451 + AluSx SINE Alu 14 267 -45 12926 167 25 19 chr18 27909483 27911454 -58077480 + L1M4c LINE L1 581 2573 -3809 4329 238 42 45 chr18 27911457 27911516 -58077418 + L1M4c LINE L1 2734 2792 -3590 2009 104 82 25 chr18 27911516 27911871 -58077063 + THE1C LTR MaLR 1 375 0 4329 238 42 45 chr18 27911871 27912635 -58076299 + L1M4c LINE L1 2792 3557 -2825 2005 162 103 3 chr18 27912635 27913024 -58075910 + MSTA LTR MaLR 1 428 0 4329 238 42 45 chr18 27913024 27913551 -58075383 + L1M4c LINE L1 3557 4082 -2300 1889 190 40 107 chr18 27913551 27914082 -58074852 + LTR42 LTR ERVL 1 495 0 4329 238 42 45 chr18 27914082 27914319 -58074615 + L1M4c LINE L1 4082 4318 -2064 6673 229 52 38 chr18 27914420 27915754 -58073180 - L1PA15-16 LINE L1 -3718 3131 1818 194 61 0 30 chr18 27915754 27915787 -58073147 + (TTA)n Simple_repeat Simple_repeat 2 33 0 6673 229 52 38 chr18 27915787 27917984 -58070950 - L1PA15-16 LINE L1 -5031 1818 1 312 341 72 0 chr18 27918078 27918216 -58070718 + L1ME4a LINE L1 5947 6094 -27 2252 184 21 28 chr18 27918663 27919088 -58069846 - MSTB LTR MaLR 0 426 5 32 26 0 0 chr18 27919144 27919183 -58069751 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr18 27919195 27919216 -58069718 + AT_rich Low_complexity Low_complexity 1 21 0 322 218 13 0 chr18 27919788 27919866 -58069068 + MER116 DNA Mariner 2 80 0 1057 80 0 0 chr18 27920471 27920608 -58068326 + AluSp/q SINE Alu 167 303 -10 553 108 16 43 chr18 27920608 27920793 -58068141 + (TA)n Simple_repeat Simple_repeat 1 180 0 972 192 47 23 chr18 27921275 27921489 -58067445 - MER20 DNA MER1_type 0 219 1 26 0 0 0 chr18 27921786 27921812 -58067122 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr18 27921893 27921916 -58067018 + AT_rich Low_complexity Low_complexity 1 23 0 230 114 0 23 chr18 27922118 27922162 -58066772 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 2510 36 30 0 chr18 27922848 27923150 -58065784 - AluY SINE Alu 0 311 1 339 237 66 157 chr18 27923361 27923635 -58065299 - MLT1K LTR MaLR 0 588 340 264 272 60 82 chr18 27923679 27923863 -58065071 - LTR67 LTR ERVL 0 557 378 1356 228 15 133 chr18 27924126 27924464 -58064470 + AluY SINE Alu 1 298 -3 27 0 0 0 chr18 27924464 27924491 -58064443 + AT_rich Low_complexity Low_complexity 1 27 0 400 316 36 5 chr18 27925037 27925233 -58063701 - ERVL LTR ERVL -1075 4689 4488 1775 205 74 37 chr18 27925711 27926198 -58062736 - MLT1D LTR MaLR 0 505 1 661 338 64 4 chr18 27926386 27926620 -58062314 - MIR SINE MIR -3 259 12 682 323 91 38 chr18 27926684 27927111 -58061823 - LTR16A LTR ERVL 0 450 1 476 312 12 17 chr18 27927125 27927298 -58061636 + MER5B DNA MER1_type 4 175 -3 1642 237 82 35 chr18 27929548 27930059 -58058875 - MER90 LTR ERV1 -12 563 29 31 44 0 0 chr18 27930511 27930556 -58058378 + AT_rich Low_complexity Low_complexity 1 45 0 192 392 100 45 chr18 27930753 27931044 -58057890 + L2 LINE L2 2961 3267 -5 709 308 44 0 chr18 27931207 27931434 -58057500 - MIR SINE MIR -1 261 25 958 174 82 46 chr18 27933151 27933346 -58055588 + AluJb SINE Alu 84 285 -27 1123 282 68 22 chr18 27933624 27934039 -58054895 - LTR16A LTR ERVL 0 450 17 424 275 152 41 chr18 27934168 27934437 -58054497 + HAL1 LINE L1 1048 1346 -1161 1924 112 45 0 chr18 27935373 27935659 -58053275 - AluSq SINE Alu -14 299 1 21 36 0 0 chr18 27935936 27935964 -58052970 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr18 27936267 27936299 -58052635 + AT_rich Low_complexity Low_complexity 1 32 0 1831 256 65 18 chr18 27936325 27936833 -58052101 + MLT1F LTR MaLR 6 537 -5 2240 138 32 3 chr18 27937012 27937383 -58051551 - MSTA LTR MaLR -46 382 1 323 263 15 102 chr18 27938730 27938935 -58049999 + L1MC5 LINE L1 7536 7722 -239 805 153 47 0 chr18 27938948 27939118 -58049816 - L1MA9 LINE L1 -38 6274 6097 716 250 73 5 chr18 27939330 27939522 -58049412 - MER70A LTR ERVL -264 208 4 340 158 0 0 chr18 27939529 27939586 -58049348 - L1MA9 LINE L1 -206 6106 6050 1700 226 22 8 chr18 27939617 27940059 -58048875 + MLT2B1 LTR ERVL 1 520 0 871 265 40 102 chr18 27940462 27941040 -58047894 + MER34 LTR ERV1 1 542 0 2229 101 7 0 chr18 27941218 27941524 -58047410 + AluY SINE Alu 1 308 -3 483 333 33 22 chr18 27942195 27942375 -58046559 - MLT1J LTR MaLR -239 272 91 857 238 133 80 chr18 27943076 27943476 -58045458 - MER110 LTR ERV1 -24 467 47 3293 207 47 70 chr18 27943778 27944120 -58044814 + L1M3 LINE L1 4133 4481 -1702 2036 133 0 59 chr18 27944120 27944443 -58044491 + AluSc SINE Alu 3 306 -3 3293 207 47 70 chr18 27944443 27945825 -58043109 + L1M3 LINE L1 4481 5822 -361 324 327 52 24 chr18 27945835 27946134 -58042800 + L1PA13 LINE L1 7 1051 -6534 16728 188 25 36 chr18 27947353 27949633 -58039301 + L1PA13 LINE L1 2319 4623 -2978 1043 33 0 0 chr18 27949633 27949754 -58039180 + AluY SINE Alu 176 296 -15 16728 188 25 36 chr18 27949754 27952698 -58036236 + L1PA13 LINE L1 4623 7594 -7 1720 145 38 46 chr18 27952702 27953075 -58035859 + L1MB3 LINE L1 5812 6181 -2 1584 171 0 4 chr18 27953381 27953639 -58035295 + AluJb SINE Alu 3 259 -53 3901 57 0 18 chr18 27953718 27954223 -58034711 + L1PA7 LINE L1 5653 6148 -6 21 0 0 0 chr18 27954940 27954961 -58033973 + AT_rich Low_complexity Low_complexity 1 21 0 1689 113 52 0 chr18 27956961 27957128 -58031806 - AluY SINE Alu -10 301 115 402 21 0 0 chr18 27957128 27957175 -58031759 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1689 113 52 0 chr18 27957175 27957255 -58031679 - AluY SINE Alu -196 115 41 198 303 183 49 chr18 27957568 27957710 -58031224 - L2 LINE L2 -40 3232 3072 740 275 101 39 chr18 27958841 27959226 -58029708 - MLT1I LTR MaLR 0 409 1 584 284 102 4 chr18 27959477 27959836 -58029098 - MLT1J LTR MaLR -31 480 43 2029 126 34 0 chr18 27960917 27961234 -58027700 + AluSx SINE Alu 1 312 0 2301 274 280 42 chr18 27962762 27964921 -58024013 + L2 LINE L2 638 3313 0 2197 105 7 0 chr18 27965022 27965316 -58023618 - AluSp SINE Alu -17 296 1 180 367 71 10 chr18 27965573 27965671 -58023263 - MIR3 SINE MIR -97 111 8 492 301 38 16 chr18 27967155 27967338 -58021596 - MIR SINE MIR 0 262 76 270 322 22 11 chr18 27967382 27967472 -58021462 - MIR SINE MIR -143 119 29 426 332 69 47 chr18 27967633 27967997 -58020937 - MLT1H LTR MaLR -55 494 123 180 0 0 0 chr18 27968067 27968087 -58020847 + (T)n Simple_repeat Simple_repeat 1 20 0 934 280 21 25 chr18 27969200 27969479 -58019455 + MER97c DNA MER1_type? 2 279 -811 321 203 81 0 chr18 27969493 27969567 -58019367 - MLT2B2 LTR ERVL -9 506 427 425 312 60 43 chr18 27969575 27969857 -58019077 + L1M4 LINE L1 4561 4847 -1299 615 213 40 0 chr18 27971658 27971808 -58017126 - L1MD2 LINE L1 -1 6752 6597 1466 205 34 65 chr18 27971811 27972289 -58016645 - L1MD2 LINE L1 -218 6535 6073 26 0 0 0 chr18 27972289 27972315 -58016619 + AT_rich Low_complexity Low_complexity 1 26 0 40799 32 21 1 chr18 27972315 27978332 -58010602 - L1PA2 LINE L1 -5 6150 8 10091 253 52 21 chr18 27978340 27980354 -58008580 - L1MD2 LINE L1 -668 6085 4134 2591 94 3 22 chr18 27980354 27980716 -58008218 + THE1A LTR MaLR 1 355 0 11022 107 9 8 chr18 27980716 27982293 -58006641 + THE1A-int LTR MaLR 1 1580 0 2531 102 8 0 chr18 27982293 27982645 -58006289 + THE1A LTR MaLR 1 355 0 10091 253 52 21 chr18 27982645 27986325 -58002609 - L1MD2 LINE L1 -2618 4135 42 248 379 8 32 chr18 28037741 28037865 -57951069 - MER5A DNA MER1_type -51 138 18 2257 175 24 0 chr18 28038457 28038875 -57950059 - MSTA LTR MaLR 0 428 1 2033 135 0 0 chr18 28039244 28039540 -57949394 - AluSx SINE Alu -16 296 1 226 339 136 14 chr18 28040090 28040311 -57948623 - L1ME LINE L1 -537 5627 5380 186 351 140 35 chr18 28041112 28041606 -57947328 + L2 LINE L2 2552 3092 -180 2045 180 59 5 chr18 28043319 28043725 -57945209 + MSTA LTR MaLR 1 428 0 369 242 126 0 chr18 28044269 28044364 -57944570 - MER58B DNA MER1_type -3 338 232 2579 108 8 0 chr18 28045341 28045702 -57943232 + THE1B LTR MaLR 1 364 0 6241 89 20 7 chr18 28046062 28046945 -57941989 + L1PA10 LINE L1 5254 6151 -17 207 0 0 0 chr18 28046945 28046968 -57941966 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 6241 89 20 7 chr18 28046968 28046986 -57941948 + L1PA10 LINE L1 6151 6167 -1 332 316 8 17 chr18 28047284 28047401 -57941533 - MIR SINE MIR -68 140 25 29 0 0 0 chr18 28048005 28048034 -57940900 + AT_rich Low_complexity Low_complexity 1 29 0 364 253 24 0 chr18 28048684 28048767 -57940167 + MER7A DNA MER2_type 1 83 -263 993 175 38 26 chr18 28048769 28049048 -57939886 + LTR1 LTR ERV1 1 187 -598 * 1847 194 116 99 chr18 28049047 28049763 -57939171 + LTR1B LTR ERV1 99 826 0 1407 152 0 25 chr18 28049771 28050015 -57938919 + MER7A DNA MER2_type 109 346 0 407 288 93 0 chr18 28052496 28052635 -57936299 + MIR SINE MIR 63 214 -48 3487 228 66 20 chr18 28053337 28054881 -57934053 - L1MB4 LINE L1 0 6416 4809 2044 239 60 38 chr18 28054883 28055531 -57933403 - L1MB4 LINE L1 -2170 4212 3539 1396 136 32 0 chr18 28055531 28055752 -57933182 + MER30 DNA MER1_type 2 229 -1 2044 239 60 38 chr18 28055752 28055962 -57932972 - L1MB4 LINE L1 -2843 3539 3335 4343 161 34 9 chr18 28056016 28056829 -57932105 - L1MA3 LINE L1 -31 6274 5441 746 223 46 52 chr18 28056827 28057132 -57931802 - L1MB4 LINE L1 -5268 1116 814 * 415 209 19 0 chr18 28057135 28057240 -57931694 + L1ME2 LINE L1 5866 5972 -192 266 279 58 0 chr18 28057357 28057443 -57931491 + MLT1C LTR MaLR 54 144 -361 439 171 43 18 chr18 28057444 28057518 -57931416 + (TA)n Simple_repeat Simple_repeat 1 72 -96 3324 112 49 4 chr18 28057518 28058047 -57930887 + L1PA11 LINE L1 5617 6169 -5 439 171 43 18 chr18 28058047 28058136 -57930798 + (TA)n Simple_repeat Simple_repeat 72 168 0 922 257 33 40 chr18 28058136 28058436 -57930498 + MLT1C LTR MaLR 168 465 -2 1479 171 117 0 chr18 28058467 28058724 -57930210 + AluJb SINE Alu 5 291 -21 368 302 47 68 chr18 28058737 28058972 -57929962 + MLT1I LTR MaLR 180 409 0 22 56 0 0 chr18 28059539 28059575 -57929359 + AT_rich Low_complexity Low_complexity 1 36 0 261 108 108 0 chr18 28059879 28059953 -57928981 + (TTAA)n Simple_repeat Simple_repeat 1 82 0 270 73 0 0 chr18 28060056 28060097 -57928837 + (TATAA)n Simple_repeat Simple_repeat 2 42 0 660 322 58 59 chr18 28060121 28060692 -57928242 - L2 LINE L2 -226 3087 2517 247 184 40 0 chr18 28060945 28061021 -57927913 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 26 30 0 0 chr18 28061419 28061452 -57927482 + AT_rich Low_complexity Low_complexity 1 33 0 5502 131 5 4 chr18 28061770 28062607 -57926327 + L1PA16 LINE L1 5320 6157 -9 851 130 0 0 chr18 28062627 28062750 -57926184 + AluSg/x SINE Alu 172 294 -16 1413 205 47 22 chr18 28063063 28063424 -57925510 - MLT1A2 LTR MaLR 0 374 5 539 72 0 0 chr18 28063898 28063967 -57924967 - THE1C LTR MaLR -306 69 1 221 291 0 0 chr18 28066693 28066748 -57922186 + (CACCAT)n Simple_repeat Simple_repeat 1 55 0 461 158 9 26 chr18 28068470 28068584 -57920350 + T-rich Low_complexity Low_complexity 2 113 0 890 175 6 0 chr18 28068602 28068779 -57920155 + CT-rich Low_complexity Low_complexity 1 178 0 244 284 52 17 chr18 28069527 28069643 -57919291 - L1ME LINE L1 -298 5823 5704 219 361 131 16 chr18 28069696 28069818 -57919116 + MIR SINE MIR 54 189 -73 22 35 0 0 chr18 28070832 28070861 -57918073 + AT_rich Low_complexity Low_complexity 1 29 0 1324 235 157 25 chr18 28070862 28071366 -57917568 - MLT1F1 LTR MaLR 0 567 1 300 111 0 0 chr18 28071496 28071541 -57917393 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 308 310 58 39 chr18 28071996 28072151 -57916783 + L3 LINE CR1 1403 1560 -17 183 261 87 29 chr18 28072303 28072372 -57916562 + MIR SINE MIR 119 191 -71 1636 245 21 13 chr18 28072492 28072876 -57916058 + MER82 DNA MER2_type 267 653 0 581 222 17 0 chr18 28073009 28073126 -57915808 - MER82 DNA MER2_type -527 126 8 21 0 0 0 chr18 28074946 28074967 -57913967 + AT_rich Low_complexity Low_complexity 1 21 0 210 37 0 0 chr18 28075070 28075097 -57913837 + (CA)n Simple_repeat Simple_repeat 2 28 0 270 296 17 9 chr18 28075221 28075336 -57913598 - L1MEc LINE L1 -5453 943 828 1398 212 120 83 chr18 28075342 28075702 -57913232 - MLT1F1 LTR MaLR -2 565 178 2710 16 0 0 chr18 28075702 28076006 -57912928 - AluYb8 SINE Alu -14 304 1 1398 212 120 83 chr18 28076006 28076181 -57912753 - MLT1F1 LTR MaLR -389 178 11 213 267 0 17 chr18 28076509 28076569 -57912365 + (TA)n Simple_repeat Simple_repeat 1 59 0 31 0 0 0 chr18 28078050 28078081 -57910853 + AT_rich Low_complexity Low_complexity 1 31 0 683 241 119 34 chr18 28078212 28078448 -57910486 + MIR SINE MIR 1 256 -6 191 410 16 0 chr18 28079572 28079633 -57909301 + L2 LINE L2 3117 3178 -94 4169 160 11 17 chr18 28079976 28080689 -57908245 + Tigger1 DNA MER2_type 2 710 -1708 3608 116 9 11 chr18 28080689 28081135 -57907799 - Ricksha_b DNA DNA -2083 771 325 1958 156 8 19 chr18 28081135 28081494 -57907440 + THE1A LTR MaLR 1 355 0 3608 116 9 11 chr18 28081494 28081581 -57907353 - Ricksha_b DNA DNA -2529 325 239 471 269 0 0 chr18 28081591 28081710 -57907224 - Ricksha_b DNA DNA -1135 119 1 8154 138 17 6 chr18 28081711 28083011 -57905923 + Tigger1 DNA MER2_type 951 2264 -154 227 339 29 18 chr18 28083030 28083201 -57905733 + L1MC/D LINE L1 5602 5774 -2034 407 52 17 0 chr18 28083378 28083436 -57905498 + (TG)n Simple_repeat Simple_repeat 2 60 0 23 54 0 0 chr18 28083558 28083595 -57905339 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr18 28083652 28083681 -57905253 + AT_rich Low_complexity Low_complexity 1 29 0 304 294 0 40 chr18 28085315 28085441 -57903493 - L1MC4 LINE L1 -1314 6728 6608 26 0 0 0 chr18 28086245 28086271 -57902663 + AT_rich Low_complexity Low_complexity 1 26 0 205 344 53 53 chr18 28086909 28087098 -57901836 - MIR SINE MIR -50 212 24 828 235 93 10 chr18 28087098 28087387 -57901547 - MER33 DNA MER1_type 0 324 12 192 361 82 16 chr18 28087473 28087656 -57901278 + MIR SINE MIR 53 247 -15 2941 94 66 0 chr18 28088412 28088837 -57900097 - MLT2A2 LTR ERVL 0 453 1 239 368 26 13 chr18 28089496 28089651 -57899283 - L1ME LINE L1 -464 5698 5542 2548 34 0 0 chr18 28089661 28089958 -57898976 - AluY SINE Alu -14 297 1 402 357 18 22 chr18 28090007 28090234 -57898700 + L1M4 LINE L1 4904 5129 -1017 350 207 0 49 chr18 28090420 28090502 -57898432 - MER58 DNA MER1_type -10 2410 128 35 0 0 0 chr18 28090525 28090560 -57898374 + AT_rich Low_complexity Low_complexity 1 35 0 236 274 0 0 chr18 28090693 28090744 -57898190 - MIR3 SINE MIR -49 159 109 408 297 41 51 chr18 28092359 28092555 -57896379 + L1ME3A LINE L1 4031 4224 -1922 424 283 36 20 chr18 28092625 28092876 -57896058 + L1ME3A LINE L1 4392 4646 -1500 566 200 122 0 chr18 28092922 28093037 -57895897 + FLAM_C SINE Alu 2 130 -3 216 0 0 0 chr18 28093057 28093081 -57895853 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 28 71 0 0 chr18 28093454 28093510 -57895424 + AT_rich Low_complexity Low_complexity 1 56 0 345 282 80 16 chr18 28093970 28094158 -57894776 + L1ME3A LINE L1 5682 5881 -289 22 0 0 0 chr18 28095266 28095288 -57893646 + AT_rich Low_complexity Low_complexity 1 22 0 206 265 0 0 chr18 28096138 28096187 -57892747 - L2 LINE L2 -2 3311 3263 425 189 22 11 chr18 28096880 28096970 -57891964 - MLT1H LTR MaLR -22 527 437 273 223 29 114 chr18 28096966 28097141 -57891793 - Charlie2 DNA MER1_type -811 2051 1892 * 887 248 191 31 chr18 28097201 28097552 -57891382 - MLT1H LTR MaLR -148 407 1 184 304 43 70 chr18 28097830 28097945 -57890989 + MIR3 SINE MIR 90 201 -7 313 281 188 0 chr18 28098065 28098161 -57890773 + L2 LINE L2 3143 3256 -16 235 363 37 0 chr18 28098314 28098449 -57890485 + Charlie2 DNA MER1_type 182 321 -2461 574 292 25 13 chr18 28098462 28098698 -57890236 + Charlie2 DNA MER1_type 1862 2100 -762 490 211 0 0 chr18 28098853 28098948 -57889986 + FLAM_A SINE Alu 16 110 -32 261 0 0 0 chr18 28098949 28098978 -57889956 + (TC)n Simple_repeat Simple_repeat 2 30 0 228 35 0 0 chr18 28098996 28099025 -57889909 + (CA)n Simple_repeat Simple_repeat 2 30 0 257 268 0 0 chr18 28099028 28099099 -57889835 + L1MC4 LINE L1 6614 6684 -1358 704 250 35 0 chr18 28099361 28099533 -57889401 - MER45A DNA AcHobo 0 178 1 1315 242 40 49 chr18 28101510 28101935 -57886999 - MLT1D LTR MaLR -79 426 6 202 179 250 0 chr18 28101961 28102017 -57886917 + MIR SINE MIR 167 236 -26 3499 223 51 62 chr18 28102053 28102632 -57886302 + MER45B DNA AcHobo 59 643 -938 2196 114 3 0 chr18 28102632 28102930 -57886004 + AluSp SINE Alu 1 299 -14 432 0 0 0 chr18 28102930 28102978 -57885956 + (TA)n Simple_repeat Simple_repeat 2 49 0 3499 223 51 62 chr18 28102978 28103108 -57885826 + MER45B DNA AcHobo 642 772 -809 7494 30 1 0 chr18 28103108 28104331 -57884603 + L1PA3 LINE L1 4922 6150 -5 3499 223 51 62 chr18 28104331 28104612 -57884322 + MER45B DNA AcHobo 772 1040 0 356 318 28 9 chr18 28104623 28104730 -57884204 + MIR SINE MIR 34 142 -120 289 289 127 36 chr18 28105756 28105922 -57883012 + MIR SINE MIR 36 216 -46 694 213 52 0 chr18 28107803 28107939 -57880995 + Tigger3(Golem) DNA MER2_type 1 143 -2886 * 1423 188 12 0 chr18 28107935 28108190 -57880744 + Tigger3(Golem) DNA MER2_type 2781 3038 0 254 391 24 21 chr18 28110564 28110847 -57878087 - L2 LINE L2 -17 3296 2917 218 323 61 10 chr18 28110891 28110990 -57877944 - MIR SINE MIR -65 143 40 382 331 78 18 chr18 28111952 28112236 -57876698 + L1M4 LINE L1 2288 2588 -3558 1056 188 100 52 chr18 28112278 28112490 -57876444 + MER63 DNA MER1_type 734 967 -93 697 122 43 0 chr18 28112490 28112605 -57876329 - L1PA13 LINE L1 0 6163 6044 1056 188 100 52 chr18 28112605 28112701 -57876233 + MER63 DNA MER1_type 967 1057 -3 301 319 25 0 chr18 28112791 28112910 -57876024 + Charlie2b DNA MER1_type 530 651 -2131 189 0 0 0 chr18 28113214 28113235 -57875699 + (TTA)n Simple_repeat Simple_repeat 3 23 0 1312 124 9 4 chr18 28113236 28113461 -57875473 - L1MA1 LINE L1 0 6302 6077 2155 107 0 0 chr18 28113572 28113853 -57875081 - AluSg SINE Alu -29 281 1 2065 144 41 24 chr18 28114064 28114433 -57874501 - THE1C LTR MaLR 0 375 1 512 326 60 32 chr18 28114518 28115113 -57873821 - L1ME3A LINE L1 -215 5955 5344 295 250 92 73 chr18 28115112 28115372 -57873562 - HAL1 LINE L1 -838 1669 1405 * 464 285 52 36 chr18 28115419 28115668 -57873266 - L1MEd LINE L1 -4910 1209 957 890 226 18 14 chr18 28115890 28116107 -57872827 - MER20 DNA MER1_type 0 219 2 280 319 94 6 chr18 28116121 28116281 -57872653 + L1MC4 LINE L1 7505 7678 -364 341 273 36 56 chr18 28116313 28116630 -57872304 + L1MC4 LINE L1 7753 7995 0 274 315 112 33 chr18 28116839 28117080 -57871854 + MIR SINE MIR 1 260 -2 624 269 72 28 chr18 28118037 28118286 -57870648 - MIR SINE MIR -1 261 2 21 36 0 0 chr18 28118294 28118322 -57870612 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr18 28119212 28119240 -57869694 + AT_rich Low_complexity Low_complexity 1 28 0 448 167 36 0 chr18 28119435 28119519 -57869415 - Tigger5 DNA MER2_type 0 2323 2237 229 264 0 0 chr18 28119529 28119582 -57869352 - Tigger5 DNA MER2_type -2269 54 2 23 78 0 0 chr18 28119696 28119747 -57869187 + AT_rich Low_complexity Low_complexity 1 51 0 270 0 0 0 chr18 28120339 28120369 -57868565 + (T)n Simple_repeat Simple_repeat 1 30 0 384 258 34 70 chr18 28121342 28121627 -57867307 - L1MC4 LINE L1 -740 7221 6982 402 301 25 6 chr18 28121717 28121880 -57867054 - L1MC4 LINE L1 -1013 7029 6864 2883 232 112 24 chr18 28122124 28124275 -57864659 + L1MCb LINE L1 10 2477 -4087 1041 262 12 6 chr18 28124253 28124581 -57864353 + L1MCb LINE L1 2689 3018 -3546 * 282 87 0 0 chr18 28124752 28124798 -57864136 + (TG)n Simple_repeat Simple_repeat 2 47 0 1430 137 0 5 chr18 28124904 28125115 -57863819 + LOR1a LTR ERV1 288 497 0 23 54 0 0 chr18 28126559 28126596 -57862338 + AT_rich Low_complexity Low_complexity 1 37 0 305 290 15 46 chr18 28127559 28127690 -57861244 + MIR SINE MIR 76 202 -60 839 240 64 5 chr18 28128119 28128323 -57860611 - MER58A DNA MER1_type -8 216 1 260 215 21 21 chr18 28128700 28128793 -57860141 + L1M4 LINE L1 4609 4701 -1445 921 225 74 63 chr18 28128875 28129319 -57859615 - L1M4 LINE L1 -962 5184 4736 341 303 83 38 chr18 28129343 28129739 -57859195 - L1M4 LINE L1 -1797 4349 3936 4358 229 90 42 chr18 28129744 28130043 -57858891 + L1M4 LINE L1 5 288 -6254 1977 125 4 0 chr18 28130043 28130482 -57858452 - AluSx SINE Alu 0 440 1 4358 229 90 42 chr18 28130482 28131335 -57857599 + L1M4 LINE L1 288 1237 -5305 1857 154 27 27 chr18 28131335 28131672 -57857262 + MER1B DNA MER1_type 1 337 0 4358 229 90 42 chr18 28131672 28131879 -57857055 + L1M4 LINE L1 1237 1433 -5109 1848 231 83 57 chr18 28131977 28132841 -57856093 - L1MDa LINE L1 -3890 2650 1764 1127 191 184 0 chr18 28132851 28133123 -57855811 - MER2 DNA MER2_type -7 338 17 2100 213 75 40 chr18 28133136 28133856 -57855078 - L1MDa LINE L1 -4785 1755 1011 267 304 54 18 chr18 28133976 28134144 -57854790 - L1M4 LINE L1 -2340 3806 3633 4055 218 68 38 chr18 28134245 28135507 -57853427 + L1M4 LINE L1 3716 5015 -1131 241 232 0 0 chr18 28135520 28135576 -57853358 + L1M LINE L1 5353 5408 -770 339 149 43 53 chr18 28135578 28135672 -57853262 + L1MB8 LINE L1 6085 6177 -1 283 319 117 23 chr18 28135882 28136623 -57852311 - L1M4 LINE L1 -2871 3275 2465 742 258 6 6 chr18 28136632 28136810 -57852124 + MER45A DNA AcHobo 1 178 0 181 376 89 20 chr18 28137116 28137217 -57851717 + L2 LINE L2 3162 3269 -3 461 338 46 29 chr18 28137517 28137757 -57851177 + LTR16C LTR ERVL 245 488 -3 196 171 0 0 chr18 28137759 28137794 -57851140 + L2 LINE L2 3279 3313 0 2338 185 60 92 chr18 28138388 28139010 -57849924 + LTR31 LTR ERV1 3 604 -15 23 0 0 0 chr18 28139021 28139044 -57849890 + AT_rich Low_complexity Low_complexity 1 23 0 491 282 75 48 chr18 28139188 28139564 -57849370 - L1MC4a LINE L1 -1834 5974 5589 484 301 129 50 chr18 28140827 28141266 -57847668 - MLT1H LTR MaLR -6 584 76 1724 186 34 12 chr18 28141510 28141837 -57847097 - MER1B DNA MER1_type 0 339 6 577 252 67 4 chr18 28142487 28142725 -57846209 + L1M4 LINE L1 3066 3318 -2828 4045 199 21 51 chr18 28142746 28143642 -57845292 + L1ME1 LINE L1 6 874 -5552 233 213 21 0 chr18 28143847 28143894 -57845040 - MER6B DNA MER2_type -1 209 162 2253 53 3 11 chr18 28144030 28144314 -57844620 - AluY SINE Alu -10 301 20 1165 174 24 10 chr18 28144551 28144758 -57844176 + MER6B DNA MER2_type 1 210 0 22 35 0 0 chr18 28144923 28144952 -57843982 + AT_rich Low_complexity Low_complexity 1 29 0 734 252 87 52 chr18 28145076 28145343 -57843591 + L1ME1 LINE L1 3823 4112 -2314 2251 53 0 74 chr18 28145343 28145666 -57843268 - AluY SINE Alu -12 299 1 734 252 87 52 chr18 28145666 28145823 -57843111 + L1ME1 LINE L1 4112 4262 -2164 3468 239 44 41 chr18 28145918 28148092 -57840842 + L1ME1 LINE L1 4266 6441 -5 339 264 5 104 chr18 28149093 28149286 -57839648 - MER31-int LTR ERV1 -2365 2571 2398 263 215 15 96 chr18 28150241 28150376 -57838558 - MER31-int LTR ERV1 -3503 1433 1310 2427 158 24 98 chr18 28150444 28150993 -57837941 + MLT2B2 LTR ERVL 8 515 0 355 285 8 0 chr18 28151743 28151866 -57837068 - LTR37A LTR ERV1 -22 404 281 286 266 9 18 chr18 28151873 28151982 -57836952 + (TA)n Simple_repeat Simple_repeat 2 109 0 587 224 18 82 chr18 28152134 28152304 -57836630 + MLT1E3 LTR MaLR 61 219 -405 247 100 60 0 chr18 28152567 28152617 -57836317 + MLT2F LTR ERVL 609 661 -2 474 217 83 123 chr18 28152654 28152931 -57836003 - LTR37B LTR ERV1 -192 276 11 301 252 118 0 chr18 28152964 28153083 -57835851 + L1ME LINE L1 5197 5329 -817 5333 58 0 0 chr18 28153083 28153750 -57835184 + L1PA6 LINE L1 5487 6153 -1 458 302 73 47 chr18 28153756 28153832 -57835102 + L1ME LINE L1 5290 5363 -799 1385 175 142 12 chr18 28153832 28154164 -57834770 + THE1C LTR MaLR 1 375 0 458 302 73 47 chr18 28154164 28154495 -57834439 + L1ME LINE L1 5363 5718 -444 461 184 0 0 chr18 28154740 28154827 -57834107 + AluJ/FRAM SINE Alu 220 306 -6 1623 282 173 13 chr18 28154844 28155631 -57833303 - L2 LINE L2 -1382 1932 1020 446 333 0 0 chr18 28155634 28155742 -57833192 - L2 LINE L2 -498 2816 2709 341 320 39 20 chr18 28155848 28156001 -57832933 - MIR SINE MIR -53 209 54 216 0 0 0 chr18 28156207 28156231 -57832703 + (ATG)n Simple_repeat Simple_repeat 3 26 0 292 293 13 0 chr18 28156249 28156324 -57832610 - MIR SINE MIR -19 243 168 589 279 41 0 chr18 28156903 28157050 -57831884 - MIR SINE MIR -103 159 7 5030 149 17 48 chr18 28158217 28159169 -57829765 - MER49 LTR ERV1 0 923 2 422 258 156 65 chr18 28159635 28160200 -57828734 - HAL1b LINE L1 0 1348 733 1588 293 52 62 chr18 28160493 28161597 -57827337 - HAL1 LINE L1 -13 2494 1401 1059 36 65 0 chr18 28161619 28161758 -57827176 - AluY SINE Alu -12 299 152 604 291 90 11 chr18 28161762 28162130 -57826804 - HAL1 LINE L1 -1120 1387 991 4155 177 19 39 chr18 28162144 28162997 -57825937 - L1MB2 LINE L1 -9 6162 5327 440 281 60 18 chr18 28162998 28163165 -57825769 - HAL1 LINE L1 -1561 946 773 290 209 23 39 chr18 28163224 28163353 -57825581 + T-rich Low_complexity Low_complexity 6 132 0 286 344 76 32 chr18 28164435 28164592 -57824342 + MIR3 SINE MIR 34 197 -11 22 0 0 0 chr18 28164611 28164633 -57824301 + AT_rich Low_complexity Low_complexity 1 22 0 5213 222 38 3 chr18 28165357 28165423 -57823511 - L1MB2 LINE L1 -1667 4479 4417 185 0 0 39 chr18 28165423 28165449 -57823485 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 5213 222 38 3 chr18 28165449 28166648 -57822286 - L1MB2 LINE L1 -1729 4417 3170 608 229 6 0 chr18 28166948 28167114 -57821820 + GA-rich Low_complexity Low_complexity 2 168 0 30 27 0 0 chr18 28167804 28167841 -57821093 + AT_rich Low_complexity Low_complexity 1 37 0 352 353 90 20 chr18 28167917 28168161 -57820773 + MIR SINE MIR 2 262 0 43 20 0 0 chr18 28169016 28169066 -57819868 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr18 28169204 28169225 -57819709 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr18 28169584 28169614 -57819320 + AT_rich Low_complexity Low_complexity 1 30 0 408 306 83 0 chr18 28169990 28170147 -57818787 + MLT1J LTR MaLR 1 170 -341 391 224 0 0 chr18 28170174 28170250 -57818684 + Tigger3(Golem) DNA MER2_type 1 76 -2953 611 211 0 0 chr18 28170381 28170490 -57818444 + Tigger3(Golem) DNA MER2_type 2921 3029 0 686 274 50 46 chr18 28170496 28170777 -57818157 + MLT1J LTR MaLR 228 509 -2 557 329 109 6 chr18 28171216 28171547 -57817387 - L3 LINE CR1 -78 1499 1135 2069 135 0 0 chr18 28171624 28171921 -57817013 - AluSx SINE Alu -15 297 1 1959 149 18 24 chr18 28172405 28172740 -57816194 - MER1B DNA MER1_type 0 337 5 404 359 29 10 chr18 28173535 28173741 -57815193 - MIR SINE MIR -44 218 9 6661 73 10 0 chr18 28176788 28178043 -57810891 + L1PA7 LINE L1 4894 6154 0 244 266 31 0 chr18 28180403 28180467 -57808467 + MIR SINE MIR 78 143 -119 1931 103 0 0 chr18 28180483 28180790 -57808144 + AluSg SINE Alu 48 354 0 198 0 0 0 chr18 28181657 28181679 -57807255 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 3086 139 14 2 chr18 28182334 28182853 -57806081 - Tigger3(Golem) DNA MER2_type -1 3028 2504 3093 97 2 2 chr18 28182865 28183341 -57805593 - L1P LINE L1 -3346 2800 2325 10258 81 6 1 chr18 28183341 28185552 -57803382 + L1PA7 LINE L1 3919 6150 -4 1712 115 3 60 chr18 28185571 28185885 -57803049 - Tigger3(Golem) DNA MER2_type -625 2404 2109 676 233 0 0 chr18 28185873 28186006 -57802928 - Tigger3(Golem) DNA MER2_type -2896 133 1 * 32 26 0 0 chr18 28186772 28186811 -57802123 + AT_rich Low_complexity Low_complexity 1 39 0 10344 131 39 38 chr18 28187431 28187790 -57801144 - Tigger1 DNA MER2_type -481 1937 1580 2557 168 9 7 chr18 28187790 28188212 -57800722 - MSTB LTR MaLR 0 426 4 10344 131 39 38 chr18 28188212 28189779 -57799155 - Tigger1 DNA MER2_type -838 1580 10 22 70 0 0 chr18 28190375 28190418 -57798516 + AT_rich Low_complexity Low_complexity 1 43 0 614 320 81 9 chr18 28190825 28191047 -57797887 - MIR SINE MIR -2 260 23 24 0 0 0 chr18 28193016 28193040 -57795894 + AT_rich Low_complexity Low_complexity 1 24 0 2308 122 0 3 chr18 28194285 28194596 -57794338 + AluSq SINE Alu 1 310 -3 968 200 31 162 chr18 28195098 28195518 -57793416 - MLT1A1 LTR MaLR 0 365 1 331 309 54 20 chr18 28196871 28197020 -57791914 + MIR SINE MIR 57 210 -52 1907 161 0 0 chr18 28197546 28197845 -57791089 - AluSx SINE Alu -13 299 1 247 307 0 13 chr18 28198885 28198960 -57789974 - MIR SINE MIR -5 257 184 2076 144 3 0 chr18 28199477 28199776 -57789158 + AluSx SINE Alu 1 300 -12 23 0 0 0 chr18 28199966 28199989 -57788945 + AT_rich Low_complexity Low_complexity 1 23 0 226 257 89 145 chr18 28200271 28200450 -57788484 + L2 LINE L2 2310 2478 -836 503 313 76 104 chr18 28200934 28201436 -57787498 + L2 LINE L2 2475 2962 -352 380 156 21 62 chr18 28201774 28201870 -57787064 + MLT1G1 LTR MaLR 3 94 -473 470 296 20 20 chr18 28201915 28202067 -57786867 + MLT1G1 LTR MaLR 154 305 -225 571 216 50 106 chr18 28202087 28202305 -57786629 - MER58A DNA MER1_type -13 211 6 491 273 56 37 chr18 28202346 28202507 -57786427 + MLT1G1 LTR MaLR 432 595 0 2205 128 0 3 chr18 28202954 28203258 -57785676 + AluSx SINE Alu 1 303 -9 21 57 0 0 chr18 28203371 28203406 -57785528 + AT_rich Low_complexity Low_complexity 1 35 0 914 197 9 58 chr18 28203511 28203734 -57785200 - AluJo SINE Alu -16 296 85 1638 194 14 0 chr18 28205151 28205439 -57783495 - AluJb SINE Alu -20 292 1 288 197 16 0 chr18 28205626 28205687 -57783247 + MLT1F LTR MaLR 481 542 0 210 245 113 57 chr18 28206832 28206938 -57781996 - MIR SINE MIR -137 125 14 181 175 0 35 chr18 28206947 28207004 -57781930 + CT-rich Low_complexity Low_complexity 4 58 0 21 0 0 0 chr18 28207073 28207094 -57781840 + AT_rich Low_complexity Low_complexity 1 21 0 1569 162 86 13 chr18 28209820 28210134 -57778800 + MER1B DNA MER1_type 1 337 0 2013 66 13 0 chr18 28210380 28210681 -57778253 - L1P LINE L1 -825 5321 5017 2250 98 0 3 chr18 28210682 28211008 -57777926 + L1PA8 LINE L1 5848 6172 0 221 189 19 0 chr18 28211522 28211575 -57777359 + A-rich Low_complexity Low_complexity 6 59 0 22 56 0 0 chr18 28212146 28212182 -57776752 + AT_rich Low_complexity Low_complexity 1 36 0 4557 148 3 6 chr18 28213415 28214139 -57774795 - MER72 LTR ERV1 0 722 1 186 43 0 0 chr18 28214162 28214185 -57774749 + (TC)n Simple_repeat Simple_repeat 1 23 0 820 237 31 70 chr18 28214871 28215286 -57773648 + LTR8 LTR ERV1 310 691 0 311 290 32 0 chr18 28215911 28216004 -57772930 + MIR SINE MIR 6 101 -161 2486 104 63 23 chr18 28216008 28216439 -57772495 - LTR7 LTR ERV1 -2 448 1 2332 94 48 0 chr18 28216439 28216811 -57772123 - HERVH LTR ERV1 0 7713 7324 1354 110 18 9 chr18 28216811 28217029 -57771905 - HERVH LTR ERV1 -1894 5819 5600 3333 160 5 3 chr18 28217036 28217604 -57771330 - HERVH LTR ERV1 -2570 5143 4575 1276 98 0 0 chr18 28217601 28217784 -57771150 - HERVH LTR ERV1 -3043 4670 4488 * 3211 109 4 6 chr18 28217786 28218289 -57770645 - HERVH LTR ERV1 -3720 3993 3492 809 163 14 0 chr18 28218281 28218428 -57770506 - HERVH LTR ERV1 -4425 3288 3140 * 18505 90 25 32 chr18 28218422 28221428 -57767506 - HERVH LTR ERV1 -4726 2987 1 2386 104 59 21 chr18 28221437 28221861 -57767073 - LTR7 LTR ERV1 -10 440 1 251 343 70 0 chr18 28221863 28222006 -57766928 + MIR SINE MIR 110 262 0 1575 216 39 44 chr18 28222010 28222421 -57766513 - LTR2 LTR ERV1 0 449 41 24 0 0 0 chr18 28223002 28223026 -57765908 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr18 28223221 28223242 -57765692 + AT_rich Low_complexity Low_complexity 1 21 0 867 345 162 46 chr18 28223355 28224407 -57764527 - L2 LINE L2 -17 3255 2327 1784 103 4 38 chr18 28224407 28224670 -57764264 + AluSx SINE Alu 50 303 -9 867 345 162 46 chr18 28224670 28225632 -57763302 - L2 LINE L2 -945 2327 998 23 54 0 0 chr18 28226370 28226407 -57762527 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr18 28226530 28226558 -57762376 + AT_rich Low_complexity Low_complexity 1 28 0 33 25 0 0 chr18 28226751 28226791 -57762143 + AT_rich Low_complexity Low_complexity 1 40 0 215 309 0 0 chr18 28229245 28229313 -57759621 + (TCCA)n Simple_repeat Simple_repeat 1 68 0 301 318 88 75 chr18 28229358 28229666 -57759268 - L2 LINE L2 -22 3250 2939 261 250 15 15 chr18 28231307 28231443 -57757491 + (TTA)n Simple_repeat Simple_repeat 1 136 0 24 32 0 0 chr18 28231443 28231474 -57757460 + AT_rich Low_complexity Low_complexity 1 31 0 351 253 153 50 chr18 28231481 28231683 -57757251 - L1MEd LINE L1 -5212 907 685 25 51 0 0 chr18 28232640 28232679 -57756255 + AT_rich Low_complexity Low_complexity 1 39 0 1921 160 42 6 chr18 28233238 28233569 -57755365 - MER2 DNA MER2_type -1 343 1 22 0 0 0 chr18 28233654 28233676 -57755258 + AT_rich Low_complexity Low_complexity 1 22 0 21 82 0 0 chr18 28235013 28235062 -57753872 + AT_rich Low_complexity Low_complexity 1 49 0 722 278 94 15 chr18 28235251 28235582 -57753352 + L2 LINE L2 2956 3312 -1 577 203 20 14 chr18 28236396 28236544 -57752390 - L1MA4 LINE L1 -1 6299 6151 275 283 113 28 chr18 28237276 28237382 -57751552 - MIR3 SINE MIR -11 197 83 386 360 39 75 chr18 28237852 28238185 -57750749 - L2 LINE L2 -1 3271 2951 301 234 43 43 chr18 28238319 28238413 -57750521 - MLT1I LTR MaLR -3 406 313 416 280 54 25 chr18 28238465 28238655 -57750279 - MLT1J2 LTR MaLR -211 235 42 1915 127 41 3 chr18 28238757 28239048 -57749886 - AluSx SINE Alu -10 302 1 507 188 0 0 chr18 28240200 28240285 -57748649 - MSTB LTR MaLR -341 85 1 290 265 60 66 chr18 28240392 28240558 -57748376 + MIR SINE MIR 90 254 -8 2183 179 44 2 chr18 28240648 28241057 -57747877 - MSTB LTR MaLR 0 426 1 321 264 101 51 chr18 28241862 28242040 -57746894 - L2 LINE L2 -9 3304 3118 214 162 0 0 chr18 28242902 28242939 -57745995 - MIR3 SINE MIR -6 202 166 282 295 69 49 chr18 28242940 28243107 -57745827 + MER5A DNA MER1_type 14 172 -6 33 0 0 0 chr18 28243203 28243236 -57745698 + AT_rich Low_complexity Low_complexity 1 33 0 796 272 111 0 chr18 28243529 28243764 -57745170 - MIR SINE MIR 0 262 2 789 276 39 54 chr18 28244567 28244900 -57744034 - MLT1I LTR MaLR 0 409 82 984 320 95 30 chr18 28245962 28246516 -57742418 + L2 LINE L2 2484 3063 -250 1761 262 88 10 chr18 28246553 28247050 -57741884 - MLT1F1 LTR MaLR -12 555 20 1720 187 20 3 chr18 28247051 28247351 -57741583 - AluJb SINE Alu -7 305 1 403 322 35 85 chr18 28247521 28247675 -57741259 + MIR SINE MIR 17 154 -108 2175 119 0 3 chr18 28247675 28247970 -57740964 + AluSg SINE Alu 2 295 -15 403 322 35 85 chr18 28247970 28248073 -57740861 + MIR SINE MIR 154 261 -1 275 286 34 59 chr18 28248079 28248198 -57740736 + L2 LINE L2 3149 3264 -49 22 0 0 0 chr18 28248240 28248262 -57740672 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr18 28248835 28248873 -57740061 + AT_rich Low_complexity Low_complexity 1 38 0 280 333 44 31 chr18 28249774 28249933 -57739001 - L2 LINE L2 -12 3301 3141 257 253 92 23 chr18 28249977 28250064 -57738870 - L2 LINE L2 -2 3311 3219 781 289 78 56 chr18 28250187 28250354 -57738580 - L2 LINE L2 -460 2854 2692 2169 127 7 0 chr18 28250354 28250662 -57738272 + AluSq SINE Alu 1 310 -3 781 289 78 56 chr18 28250662 28250889 -57738045 - L2 LINE L2 -622 2692 2451 206 369 60 0 chr18 28250912 28250996 -57737938 - L2 LINE L2 -219 3053 2965 2088 191 3 3 chr18 28252988 28253343 -57735591 + MLT1A1 LTR MaLR 3 357 -8 223 139 0 0 chr18 28253350 28253386 -57735548 - MIR SINE MIR -109 153 118 214 167 0 24 chr18 28253467 28253509 -57735425 + (CTA)n Simple_repeat Simple_repeat 3 43 0 2215 186 21 78 chr18 28253509 28254074 -57734860 + LTR8 LTR ERV1 1 533 -158 748 43 11 0 chr18 28254074 28254167 -57734767 - AluSp SINE Alu -171 142 49 1082 138 11 6 chr18 28254167 28254341 -57734593 + AluSp SINE Alu 136 310 -3 1021 112 92 0 chr18 28254341 28254493 -57734441 + LTR8 LTR ERV1 526 691 0 1710 145 35 14 chr18 28255797 28256087 -57732847 - AluSq SINE Alu -17 296 1 180 200 0 0 chr18 28256179 28256219 -57732715 + (TATATG)n Simple_repeat Simple_repeat 3 42 0 2907 184 50 61 chr18 28256892 28257627 -57731307 + LTR8A LTR ERV1 1 727 0 275 316 45 38 chr18 28257735 28257868 -57731066 - MIR SINE MIR -76 186 53 2638 23 0 13 chr18 28258144 28258452 -57730482 + AluY SINE Alu 1 304 -7 218 323 0 15 chr18 28258727 28258792 -57730142 - MIR SINE MIR -125 83 20 339 294 126 56 chr18 28260025 28260157 -57728777 - LTR16A1 LTR ERVL -2 455 334 2046 196 3 0 chr18 28260157 28260519 -57728415 + MLT1A1 LTR MaLR 3 365 0 339 294 126 56 chr18 28260519 28260617 -57728317 - LTR16A1 LTR ERVL -123 334 209 225 0 0 0 chr18 28261192 28261217 -57727717 + (A)n Simple_repeat Simple_repeat 1 25 0 736 264 103 39 chr18 28262024 28262384 -57726550 + LTR33 LTR ERVL 105 487 -34 2236 244 121 29 chr18 28262497 28263394 -57725540 + Zaphod DNA AcHobo 9 988 -3043 253 114 0 0 chr18 28263394 28263429 -57725505 - MER58A DNA MER1_type 0 224 190 594 193 9 0 chr18 28263433 28263542 -57725392 - MER58A DNA MER1_type 0 151 42 1166 223 105 10 chr18 28263575 28263983 -57724951 + Zaphod DNA AcHobo 3585 4031 0 252 329 168 0 chr18 28264040 28264177 -57724757 + Charlie8 DNA MER1_type 1 160 -2257 21 71 0 0 chr18 28265198 28265240 -57723694 + AT_rich Low_complexity Low_complexity 1 42 0 853 209 114 0 chr18 28265334 28265545 -57723389 + MER106A DNA MER1_type 1 235 -1 21 36 0 0 chr18 28267594 28267622 -57721312 + AT_rich Low_complexity Low_complexity 1 28 0 1467 199 7 24 chr18 28268572 28268869 -57720065 + AluJo SINE Alu 5 296 -16 237 65 0 0 chr18 28270030 28270061 -57718873 + (CA)n Simple_repeat Simple_repeat 2 32 0 2456 192 91 32 chr18 28270204 28270851 -57718083 - L1MD2 LINE L1 -2 6357 5673 278 346 0 0 chr18 28270998 28271079 -57717855 + L2 LINE L2 3151 3231 -41 1203 223 45 45 chr18 28271086 28271441 -57717493 + MLT1A1 LTR MaLR 11 365 0 246 310 163 16 chr18 28271559 28271688 -57717246 - MIR SINE MIR -112 150 3 13025 35 2 0 chr18 28272520 28274091 -57714843 + L1P LINE L1 3518 5091 -1055 893 268 25 28 chr18 28274091 28274375 -57714559 + LTR40a LTR ERVL 235 517 -2 733 185 24 47 chr18 28274497 28274708 -57714226 + L1ME4a LINE L1 4567 4772 -1374 209 305 34 0 chr18 28275410 28275469 -57713465 - L2 LINE L2 -4 3309 3249 23 0 0 0 chr18 28275663 28275686 -57713248 + AT_rich Low_complexity Low_complexity 1 23 0 328 244 43 29 chr18 28275782 28275918 -57713016 - L1MA10 LINE L1 -4 6293 6009 810 253 8 0 chr18 28275957 28276194 -57712740 + L1ME4a LINE L1 4959 5197 -949 5723 179 34 48 chr18 28276194 28277424 -57711510 + L1MA9 LINE L1 4042 5288 -1024 1316 196 139 27 chr18 28277424 28277833 -57711101 - MSTB2 LTR MaLR -2 455 1 5723 179 34 48 chr18 28277833 28278352 -57710582 + L1MA9 LINE L1 5288 5771 -541 432 0 0 0 chr18 28278352 28278400 -57710534 + (TG)n Simple_repeat Simple_repeat 2 49 0 5723 179 34 48 chr18 28278400 28278745 -57710189 + L1MA9 LINE L1 5771 6119 -193 1164 148 45 0 chr18 28278818 28279020 -57709914 + L1MA9 LINE L1 6100 6310 -2 304 189 156 16 chr18 28279374 28279496 -57709438 + L1ME4a LINE L1 5738 5876 -245 22 35 0 0 chr18 28282361 28282390 -57706544 + AT_rich Low_complexity Low_complexity 1 29 0 1832 136 6 54 chr18 28283597 28283950 -57704984 + MER1B DNA MER1_type 2 337 0 27 73 0 0 chr18 28284261 28284316 -57704618 + AT_rich Low_complexity Low_complexity 1 55 0 194 227 13 0 chr18 28284338 28284413 -57704521 + (TA)n Simple_repeat Simple_repeat 1 76 0 23 0 0 0 chr18 28284597 28284620 -57704314 + AT_rich Low_complexity Low_complexity 1 23 0 206 156 22 0 chr18 28286698 28286743 -57702191 + GA-rich Low_complexity Low_complexity 2 47 0 1357 233 36 22 chr18 28289817 28290177 -57698757 + MLT1A1 LTR MaLR 1 365 0 227 351 8 60 chr18 28290311 28290445 -57698489 - MIR SINE MIR -62 146 20 213 39 0 0 chr18 28290468 28290494 -57698440 + (T)n Simple_repeat Simple_repeat 1 26 0 365 308 58 0 chr18 28291890 28292010 -57696924 + L2 LINE L2 3182 3308 -5 1346 234 53 48 chr18 28292010 28292464 -57696470 - LTR16A1 LTR ERVL 0 457 2 387 330 124 0 chr18 28292732 28292926 -57696008 + MIR SINE MIR 20 237 -25 328 314 52 48 chr18 28293118 28293366 -57695568 + L2 LINE L2 3051 3299 -14 23 33 0 0 chr18 28293908 28293938 -57694996 + AT_rich Low_complexity Low_complexity 1 30 0 25 75 0 0 chr18 28295972 28296025 -57692909 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr18 28296788 28296809 -57692125 + AT_rich Low_complexity Low_complexity 1 21 0 399 258 42 0 chr18 28297578 28297745 -57691189 + (TA)n Simple_repeat Simple_repeat 1 174 0 624 204 74 23 chr18 28298349 28298525 -57690409 - MER5A DNA MER1_type 0 189 5 271 299 34 26 chr18 28298677 28298794 -57690140 - MIR SINE MIR -45 217 100 188 83 0 28 chr18 28299075 28299111 -57689823 + (TTTTTG)n Simple_repeat Simple_repeat 1 35 0 293 135 0 0 chr18 28299421 28299473 -57689461 + L1MA4 LINE L1 6244 6295 -5 193 277 327 0 chr18 28300371 28300472 -57688462 + L2 LINE L2 3138 3271 -1 556 250 39 8 chr18 28301327 28301455 -57687479 + L2 LINE L2 3182 3313 0 1275 248 107 48 chr18 28301674 28301783 -57687151 - Charlie7 DNA MER1_type -1 2611 2510 3445 165 46 43 chr18 28301783 28302566 -57686368 + LTR1 LTR ERV1 1 785 0 1275 248 107 48 chr18 28302566 28303263 -57685671 - Charlie7 DNA MER1_type -102 2510 1758 356 151 55 14 chr18 28303352 28303425 -57685509 - Charlie7 DNA MER1_type -863 1749 1674 364 244 100 33 chr18 28303651 28303831 -57685103 - Charlie7 DNA MER1_type -2418 194 3 2467 78 0 0 chr18 28304366 28304675 -57684259 - AluY SINE Alu -2 309 1 1380 135 45 9 chr18 28306142 28306364 -57682570 - MER30 DNA MER1_type 0 230 1 22 0 0 0 chr18 28306741 28306763 -57682171 + AT_rich Low_complexity Low_complexity 1 22 0 2777 7 0 3 chr18 28306978 28307288 -57681646 + AluYa5 SINE Alu 1 309 -2 1942 149 3 0 chr18 28307347 28307635 -57681299 + AluSq SINE Alu 2 290 -23 891 216 274 6 chr18 28307732 28308083 -57680851 + L1MA6 LINE L1 5850 6294 -6 26 0 0 0 chr18 28308223 28308249 -57680685 + AT_rich Low_complexity Low_complexity 1 26 0 457 269 35 21 chr18 28309478 28309623 -57679311 - MIR SINE MIR 0 262 116 231 372 60 22 chr18 28309957 28310140 -57678794 - MIR SINE MIR -64 198 9 279 0 0 0 chr18 28311494 28311525 -57677409 + (CA)n Simple_repeat Simple_repeat 2 32 0 30 27 0 0 chr18 28311911 28311948 -57676986 + AT_rich Low_complexity Low_complexity 1 37 0 311 306 63 82 chr18 28312792 28313204 -57675730 + MLT1I LTR MaLR 1 404 -5 446 236 94 0 chr18 28315352 28315479 -57673455 + MLT1I LTR MaLR 263 401 -8 180 0 0 0 chr18 28315789 28315809 -57673125 + (T)n Simple_repeat Simple_repeat 1 20 0 222 91 0 0 chr18 28316179 28316212 -57672722 + (TTTAA)n Simple_repeat Simple_repeat 1 33 0 479 279 86 71 chr18 28316821 28317101 -57671833 + LTR16A1 LTR ERVL 174 457 0 749 312 60 25 chr18 28317114 28317428 -57671506 + MLT1I LTR MaLR 85 409 0 320 252 136 45 chr18 28318808 28318992 -57669942 - MIR SINE MIR -32 230 34 22 0 0 0 chr18 28319665 28319687 -57669247 + AT_rich Low_complexity Low_complexity 1 22 0 29 78 0 0 chr18 28319789 28319853 -57669081 + AT_rich Low_complexity Low_complexity 1 64 0 656 325 52 12 chr18 28320982 28321234 -57667700 + MIR SINE MIR 1 262 0 23 78 0 0 chr18 28321435 28321486 -57667448 + AT_rich Low_complexity Low_complexity 1 51 0 562 346 85 25 chr18 28321965 28322485 -57666449 - L2 LINE L2 -786 2528 1978 966 63 0 0 chr18 28322627 28322753 -57666181 + (TA)n Simple_repeat Simple_repeat 2 127 0 330 276 29 9 chr18 28322911 28323016 -57665918 - MIR SINE MIR -108 154 48 450 156 9 18 chr18 28323028 28323137 -57665797 + CT-rich Low_complexity Low_complexity 4 111 0 753 265 0 0 chr18 28323141 28323303 -57665631 - FAM SINE Alu -13 162 1 24 0 0 0 chr18 28323896 28323920 -57665014 + AT_rich Low_complexity Low_complexity 1 24 0 377 306 147 30 chr18 28325051 28325384 -57663550 - MLT1K LTR MaLR -134 454 83 523 336 80 4 chr18 28325634 28325860 -57663074 + MIR SINE MIR 20 262 0 907 216 96 142 chr18 28326139 28326343 -57662591 + MLT1F LTR MaLR 1 213 -329 276 120 0 0 chr18 28326343 28326393 -57662541 + (CA)n Simple_repeat Simple_repeat 2 51 0 907 216 96 142 chr18 28326393 28326752 -57662182 + MLT1F LTR MaLR 213 538 -4 221 116 0 23 chr18 28327235 28327278 -57661656 + (CA)n Simple_repeat Simple_repeat 1 42 0 372 59 0 0 chr18 28327302 28327353 -57661581 + (TC)n Simple_repeat Simple_repeat 1 51 0 330 319 96 30 chr18 28328221 28328356 -57660578 + MLT1F1 LTR MaLR 179 322 -245 * 344 344 23 0 chr18 28328346 28328474 -57660460 + MLT1F1 LTR MaLR 428 558 -9 210 299 47 63 chr18 28329037 28329164 -57659770 - L2 LINE L2 -215 3057 2933 424 339 54 0 chr18 28329406 28329536 -57659398 - L2 LINE L2 -12 3301 3165 3539 199 29 47 chr18 28329639 28330551 -57658383 - L1MD1 LINE L1 0 6636 5742 * 3811 227 54 30 chr18 28330543 28332128 -57656806 - L1MD1 LINE L1 -3389 3151 1541 971 289 96 49 chr18 28332198 28332624 -57656310 - MLT1H LTR MaLR -24 525 80 487 338 92 11 chr18 28332705 28333054 -57655880 - L2 LINE L2 -693 2621 2245 26 30 0 0 chr18 28333902 28333935 -57654999 + AT_rich Low_complexity Low_complexity 1 33 0 247 348 93 42 chr18 28335205 28335441 -57653493 + L2 LINE L2 567 814 -2500 507 318 52 60 chr18 28336452 28336559 -57652375 - MIR SINE MIR 0 262 156 1314 244 109 0 chr18 28336559 28336916 -57652018 - MSTD LTR MaLR 0 396 1 507 318 52 60 chr18 28336916 28337060 -57651874 - MIR SINE MIR -106 156 13 23 0 0 0 chr18 28337246 28337269 -57651665 + AT_rich Low_complexity Low_complexity 1 23 0 241 245 0 0 chr18 28337820 28337869 -57651065 + (TTCA)n Simple_repeat Simple_repeat 4 52 0 24 91 0 0 chr18 28338770 28338836 -57650098 + AT_rich Low_complexity Low_complexity 1 66 0 181 316 184 31 chr18 28338893 28338991 -57649943 - MIR SINE MIR -141 121 9 27 62 0 0 chr18 28339789 28339837 -57649097 + AT_rich Low_complexity Low_complexity 1 48 0 183 80 0 0 chr18 28340120 28340145 -57648789 + (TG)n Simple_repeat Simple_repeat 2 26 0 225 119 0 0 chr18 28340145 28340187 -57648747 - LTR66 LTR ERVL -171 439 398 584 183 19 0 chr18 28340558 28340662 -57648272 - L1M2 LINE L1 -532 5780 5675 272 285 108 0 chr18 28340843 28340973 -57647961 + MER103 DNA DNA 21 164 -2 12546 197 25 7 chr18 28341681 28342192 -57646742 - L1MA5 LINE L1 0 7362 6862 231 36 0 0 chr18 28342192 28342220 -57646714 + (TA)n Simple_repeat Simple_repeat 1 28 0 12546 197 25 7 chr18 28342220 28345474 -57643460 - L1MA5 LINE L1 -500 6862 3523 5519 229 32 30 chr18 28345480 28347001 -57641933 - L1MA5 LINE L1 -4085 3124 1600 2327 258 66 29 chr18 28346979 28347771 -57641163 - L1MA5 LINE L1 -6409 800 1 * 254 254 17 0 chr18 28348933 28348992 -57639942 + (CA)n Simple_repeat Simple_repeat 1 60 0 22 0 0 0 chr18 28351015 28351037 -57637897 + AT_rich Low_complexity Low_complexity 1 22 0 200 213 98 49 chr18 28351255 28351316 -57637618 - MIR SINE MIR -86 176 113 1914 167 28 63 chr18 28351658 28352118 -57636816 + MER31B LTR ERV1 23 466 0 318 253 147 35 chr18 28353026 28353196 -57635738 + MIR SINE MIR 53 241 -21 2327 98 0 3 chr18 28354167 28354472 -57634462 + AluSc SINE Alu 6 309 0 696 129 234 0 chr18 28354664 28354788 -57634146 - MER93b LTR ERV1 -220 153 1 594 227 31 47 chr18 28354877 28355005 -57633929 + MER5A DNA MER1_type 11 136 -53 218 274 16 0 chr18 28356235 28356297 -57632637 + L2 LINE L2 3168 3230 -83 229 339 45 127 chr18 28357140 28357361 -57631573 - L2 LINE L2 -5 3267 3065 441 0 0 0 chr18 28357556 28357605 -57631329 + (CA)n Simple_repeat Simple_repeat 2 50 0 300 227 21 72 chr18 28357624 28357721 -57631213 - L1MC4 LINE L1 -1337 6705 6614 180 0 0 0 chr18 28357866 28357886 -57631048 + (TA)n Simple_repeat Simple_repeat 2 21 0 192 97 0 0 chr18 28357888 28357919 -57631015 + (GA)n Simple_repeat Simple_repeat 2 32 0 1495 254 68 41 chr18 28358309 28358841 -57630093 - MLT1E2 LTR MaLR -80 546 1 2223 134 18 3 chr18 28358914 28359257 -57629677 - MER7A DNA MER2_type 0 346 1 223 353 49 29 chr18 28359543 28359645 -57629289 + MIR3 SINE MIR 78 181 -27 21 0 0 0 chr18 28359828 28359849 -57629085 + AT_rich Low_complexity Low_complexity 1 21 0 354 64 0 0 chr18 28359954 28360001 -57628933 + HSMAR2 DNA Mariner 2 48 -1254 1636 187 43 3 chr18 28360001 28360301 -57628633 + AluJb SINE Alu 1 312 0 3235 159 176 26 chr18 28360411 28361108 -57627826 - MSTA-int LTR MaLR -776 804 3 1950 158 117 8 chr18 28361110 28361496 -57627438 - MSTA LTR MaLR 0 428 1 1682 145 10 7 chr18 28361496 28361785 -57627149 + HSMAR2 DNA Mariner 1012 1301 -1 216 0 0 0 chr18 28361900 28361924 -57627010 + (A)n Simple_repeat Simple_repeat 1 24 0 377 364 37 6 chr18 28362426 28362588 -57626346 + L2 LINE L2 3104 3270 -2 30 0 0 0 chr18 28362897 28362927 -57626007 + AT_rich Low_complexity Low_complexity 1 30 0 379 371 20 0 chr18 28363431 28363582 -57625352 + MIR3 SINE MIR 38 191 -17 354 107 0 0 chr18 28363734 28363790 -57625144 + (TC)n Simple_repeat Simple_repeat 1 56 0 200 328 30 0 chr18 28364169 28364236 -57624698 + MIR SINE MIR 68 136 -126 250 298 36 150 chr18 28364594 28365100 -57623834 - L2 LINE L2 0 3272 2825 5736 142 5 15 chr18 28365165 28366390 -57622544 - L1PB2 LINE L1 -36 6115 4898 2718 211 10 0 chr18 28366400 28367022 -57621912 + L1PB2 LINE L1 4280 4907 -1239 382 371 53 20 chr18 28367244 28367546 -57621388 - L2 LINE L2 -976 2338 2027 767 262 75 30 chr18 28368052 28368343 -57620591 - L1MC4 LINE L1 -758 7284 6890 285 29 0 0 chr18 28368343 28368377 -57620557 + (CA)n Simple_repeat Simple_repeat 2 35 0 767 262 75 30 chr18 28368377 28368522 -57620412 - L1MC4 LINE L1 -1152 6890 6753 25 51 0 0 chr18 28368735 28368774 -57620160 + AT_rich Low_complexity Low_complexity 1 39 0 417 329 100 25 chr18 28369000 28369401 -57619533 + L1PA12 LINE L1 1667 2097 -5484 16290 208 21 29 chr18 28369412 28372757 -57616177 + L1PA15 LINE L1 1544 4832 -2771 1972 109 0 11 chr18 28372757 28373033 -57615901 + AluY SINE Alu 35 307 -4 16290 208 21 29 chr18 28373033 28375781 -57613153 + L1PA15 LINE L1 4832 7602 -1 212 200 0 40 chr18 28376664 28376714 -57612220 - MIR SINE MIR -61 201 154 297 287 43 21 chr18 28377664 28377758 -57611176 + L2 LINE L2 3218 3313 0 594 207 129 0 chr18 28378240 28378380 -57610554 + AluJb SINE Alu 142 299 -13 445 356 27 45 chr18 28378667 28378959 -57609975 - L2 LINE L2 -3 3269 2983 21 71 0 0 chr18 28379137 28379179 -57609755 + AT_rich Low_complexity Low_complexity 1 42 0 1673 226 8 22 chr18 28379255 28379613 -57609321 + MLT1A1 LTR MaLR 11 363 -2 598 289 51 42 chr18 28380428 28380739 -57608195 - L3 LINE CR1 -17 1560 1247 1643 183 103 9 chr18 28381150 28381500 -57607434 + MSTD LTR MaLR 14 396 0 190 357 0 0 chr18 28381509 28381565 -57607369 + MIR SINE MIR 6 61 -201 2464 64 0 3 chr18 28382018 28382330 -57606604 - AluY SINE Alu 0 311 1 279 0 0 0 chr18 28382840 28382871 -57606063 + (CA)n Simple_repeat Simple_repeat 2 32 0 330 285 20 26 chr18 28383933 28384053 -57604881 - Charlie4 DNA MER1_type -4 1957 1837 2014 149 27 27 chr18 28384053 28384428 -57604506 + THE1C LTR MaLR 1 375 0 330 285 20 26 chr18 28384428 28384458 -57604476 - Charlie4 DNA MER1_type -124 1837 1808 1787 128 41 82 chr18 28387272 28387663 -57601271 - THE1C LTR MaLR 0 375 1 750 267 74 0 chr18 28387709 28387926 -57601008 + MLT1G LTR MaLR 358 590 0 192 77 0 0 chr18 28388790 28388816 -57600118 + (T)n Simple_repeat Simple_repeat 1 26 0 22 0 0 0 chr18 28389440 28389462 -57599472 + AT_rich Low_complexity Low_complexity 1 22 0 463 278 184 37 chr18 28390348 28390457 -57598477 + L1ME4a LINE L1 5607 5699 -422 2251 120 0 0 chr18 28390457 28390765 -57598169 + AluSq SINE Alu 2 309 -4 463 278 184 37 chr18 28390765 28391062 -57597872 + L1ME4a LINE L1 5699 6073 -48 793 296 49 83 chr18 28391455 28391743 -57597191 + L2 LINE L2 2576 2872 -441 1695 122 115 3 chr18 28391743 28392047 -57596887 - L1PB3 LINE L1 -3 6151 5814 2894 86 68 2 chr18 28392047 28392482 -57596452 - L1PA2 LINE L1 0 6155 5686 793 296 49 83 chr18 28392482 28392955 -57595979 + L2 LINE L2 2870 3308 -5 707 310 76 35 chr18 28393247 28393563 -57595371 + MLT1J2 LTR MaLR 101 429 -21 345 284 43 21 chr18 28395177 28395318 -57593616 - MIR SINE MIR -110 152 9 21 36 0 0 chr18 28396922 28396950 -57591984 + AT_rich Low_complexity Low_complexity 1 28 0 554 200 21 28 chr18 28400053 28400198 -57588736 - L1ME2 LINE L1 -2 6162 6019 496 208 0 0 chr18 28400206 28400307 -57588627 - L1ME2 LINE L1 -184 5980 5880 339 291 18 42 chr18 28400305 28400470 -57588464 - L1 LINE L1 -2118 4028 3868 * 27 49 0 0 chr18 28400471 28400512 -57588422 + AT_rich Low_complexity Low_complexity 1 41 0 5920 44 0 3 chr18 28400512 28401240 -57587694 - L1PA5 LINE L1 0 6154 5429 3919 61 2 4 chr18 28401240 28401765 -57587169 + L1P LINE L1 3138 3661 -2485 905 256 46 29 chr18 28401768 28402116 -57586818 - L1 LINE L1 -2303 3843 3490 550 292 62 25 chr18 28402139 28402574 -57586360 - L1 LINE L1 -2824 3322 2872 * 4196 220 41 9 chr18 28402573 28404299 -57584635 - L1MB8 LINE L1 -1 6246 4427 289 194 136 0 chr18 28404276 28404379 -57584555 - L1MB8 LINE L1 -3227 2988 2872 * 1101 258 114 34 chr18 28404379 28405258 -57583676 - L1MB8 LINE L1 -3558 2657 1761 717 299 25 11 chr18 28405260 28405615 -57583319 - L1 LINE L1 -3463 2683 2324 853 253 31 93 chr18 28405615 28405689 -57583245 + MLT2C2 LTR ERVL 1 78 -386 1860 146 0 4 chr18 28405689 28405964 -57582970 + AluSx SINE Alu 1 274 -38 222 37 0 0 chr18 28405966 28405993 -57582941 + (TC)n Simple_repeat Simple_repeat 2 28 0 * 257 19 19 57 chr18 28405992 28406045 -57582889 + (TA)n Simple_repeat Simple_repeat 2 52 0 853 253 31 93 chr18 28405993 28406418 -57582516 + MLT2C2 LTR ERVL 79 423 -41 351 198 0 0 chr18 28406418 28406497 -57582437 + (CA)n Simple_repeat Simple_repeat 1 82 -4 2076 110 34 52 chr18 28406497 28406879 -57582055 - THE1C LTR MaLR 0 375 1 351 198 0 0 chr18 28406879 28406885 -57582049 + (CA)n Simple_repeat Simple_repeat 81 86 0 484 308 0 0 chr18 28407553 28407683 -57581251 - MER58A DNA MER1_type 0 224 95 5844 57 44 1 chr18 28407711 28408480 -57580454 - L1PA8 LINE L1 -5 6167 5366 365 235 71 0 chr18 28408495 28408580 -57580354 - MER58A DNA MER1_type -16 91 1 335 355 61 30 chr18 28409104 28409406 -57579528 + L1MC/D LINE L1 5354 5664 -508 625 313 39 91 chr18 28409609 28409893 -57579041 + MLT1I LTR MaLR 63 325 -84 1688 205 0 0 chr18 28409893 28410181 -57578753 - AluJb SINE Alu -24 288 1 625 313 39 91 chr18 28410181 28410260 -57578674 + MLT1I LTR MaLR 325 407 -2 21 0 0 0 chr18 28410389 28410410 -57578524 + AT_rich Low_complexity Low_complexity 1 21 0 202 341 93 33 chr18 28410731 28410913 -57578021 - L2 LINE L2 -1303 2011 1819 23 0 0 0 chr18 28411732 28411755 -57577179 + AT_rich Low_complexity Low_complexity 1 23 0 383 232 45 9 chr18 28411966 28412078 -57576856 - MER103 DNA DNA -50 116 1 253 266 63 63 chr18 28412235 28412393 -57576541 - MIR SINE MIR -58 204 47 21 36 0 0 chr18 28412813 28412841 -57576093 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr18 28413296 28413318 -57575616 + AT_rich Low_complexity Low_complexity 1 22 0 272 278 116 44 chr18 28413561 28413878 -57575056 + MLT1J LTR MaLR 100 481 -30 301 331 99 0 chr18 28414095 28414216 -57574718 + MIR SINE MIR 61 193 -69 186 43 0 0 chr18 28415074 28415097 -57573837 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 10630 166 37 12 chr18 28416474 28419445 -57569489 + L1MA6 LINE L1 3260 6295 -5 1720 167 7 3 chr18 28419544 28419872 -57569062 + AluSx SINE Alu 1 329 0 2064 129 10 0 chr18 28421488 28421797 -57567137 - AluSx SINE Alu 0 312 1 26 0 0 0 chr18 28421891 28421917 -57567017 + AT_rich Low_complexity Low_complexity 1 26 0 605 292 106 22 chr18 28422651 28422877 -57566057 - MIR SINE MIR -1 261 17 23 33 0 0 chr18 28423629 28423659 -57565275 + AT_rich Low_complexity Low_complexity 1 30 0 269 238 137 36 chr18 28424312 28424480 -57564454 - L1ME LINE L1 -721 5441 5257 617 316 76 30 chr18 28425142 28425578 -57563356 + LTR16A LTR ERVL 2 450 0 216 347 32 0 chr18 28426067 28426162 -57562772 - L2 LINE L2 -208 3064 2967 248 260 30 50 chr18 28426324 28426424 -57562510 - L2 LINE L2 -530 2784 2687 236 273 13 0 chr18 28426624 28426701 -57562233 - LTR33 LTR ERVL -103 418 341 28 29 0 0 chr18 28426749 28426784 -57562150 + AT_rich Low_complexity Low_complexity 1 35 0 225 284 59 10 chr18 28426953 28427055 -57561879 - LTR33 LTR ERVL -412 109 3 417 156 0 0 chr18 28427101 28427178 -57561756 + CT-rich Low_complexity Low_complexity 1 77 0 194 157 0 20 chr18 28427246 28427297 -57561637 + CT-rich Low_complexity Low_complexity 2 51 0 636 136 32 19 chr18 28427363 28427517 -57561417 + CT-rich Low_complexity Low_complexity 3 158 0 317 251 191 44 chr18 28427577 28427828 -57561106 - L1ME LINE L1 -5254 816 529 234 0 0 0 chr18 28428094 28428120 -57560814 + (TG)n Simple_repeat Simple_repeat 2 27 0 2228 96 0 3 chr18 28428484 28428776 -57560158 + AluSc SINE Alu 1 291 -18 24 41 0 20 chr18 28429359 28429384 -57559550 + AT_rich Low_complexity Low_complexity 1 26 -22 2218 96 17 0 chr18 28429384 28429677 -57559257 + AluY SINE Alu 1 298 -13 24 41 0 20 chr18 28429677 28429700 -57559234 + AT_rich Low_complexity Low_complexity 26 48 0 2134 82 55 7 chr18 28430184 28430477 -57558457 - AluSg1 SINE Alu -2 307 1 1022 310 126 31 chr18 28431776 28432832 -57556102 + Charlie8 DNA MER1_type 61 1216 -1201 2881 207 11 71 chr18 28432866 28433601 -57555333 + LTR8 LTR ERV1 1 691 0 972 263 23 6 chr18 28433601 28433909 -57555025 + HUERS-P1 LTR ERV1 1 387 -5876 15756 191 63 93 chr18 28434242 28439274 -57549660 + HUERS-P1 LTR ERV1 662 4502 -434 1276 154 142 48 chr18 28439294 28439624 -57549310 + HUERS-P1 LTR ERV1 5914 6274 -57 1196 296 13 0 chr18 28439705 28440016 -57548918 + HUERS-P1 LTR ERV1 5946 6260 -3 2381 229 12 76 chr18 28440019 28440692 -57548242 + LTR8 LTR ERV1 1 630 -61 952 294 121 58 chr18 28440728 28441116 -57547818 + Charlie8 DNA MER1_type 1442 1804 -613 2618 105 11 5 chr18 28441116 28441489 -57547445 + THE1C LTR MaLR 1 375 0 952 294 121 58 chr18 28441489 28442015 -57546919 + Charlie8 DNA MER1_type 1804 2414 -3 217 206 59 0 chr18 28442066 28442134 -57546800 + (TTTAA)n Simple_repeat Simple_repeat 5 76 0 260 262 128 43 chr18 28442173 28442314 -57546620 - MLT1H LTR MaLR -7 542 390 1146 189 42 52 chr18 28442840 28442998 -57545936 + L1MA9 LINE L1 5972 6127 -185 1992 132 14 0 chr18 28442998 28443294 -57545640 - AluSx SINE Alu -12 300 1 1146 189 42 52 chr18 28443294 28443441 -57545493 + L1MA9 LINE L1 6127 6274 -38 1124 247 50 23 chr18 28443446 28443949 -57544985 + L1ME LINE L1 5187 5709 -455 1546 288 59 49 chr18 28444111 28444862 -57544072 + MER20B DNA MER1_type 7 764 -19 30 27 0 0 chr18 28444924 28444961 -57543973 + AT_rich Low_complexity Low_complexity 1 37 0 320 253 68 0 chr18 28445744 28445859 -57543075 - MIR SINE MIR -41 167 40 261 98 0 0 chr18 28446191 28446232 -57542702 + (TATG)n Simple_repeat Simple_repeat 2 42 0 229 155 69 0 chr18 28446245 28446303 -57542631 - L1MC4 LINE L1 -1337 6705 6644 225 250 0 0 chr18 28446550 28446602 -57542332 + (CAT)n Simple_repeat Simple_repeat 1 52 0 285 294 9 28 chr18 28446672 28446781 -57542153 + L2 LINE L2 3191 3297 -16 508 291 59 46 chr18 28447704 28448064 -57540870 - LTR31 LTR ERV1 0 601 255 280 287 103 48 chr18 28448220 28448492 -57540442 - MLT1I LTR MaLR -3 406 120 1950 204 3 0 chr18 28448729 28449077 -57539857 + MLT1A1 LTR MaLR 15 363 -2 1085 75 0 0 chr18 28449247 28449380 -57539554 + AluYa5 SINE Alu 3 135 -176 385 251 148 54 chr18 28449383 28449586 -57539348 + HAL1 LINE L1 872 1093 -1414 3150 304 62 43 chr18 28449590 28450462 -57538472 + L1MEc LINE L1 36 890 -1686 1449 194 42 32 chr18 28450462 28450771 -57538163 + AluJo SINE Alu 1 312 0 330 26 0 0 chr18 28450779 28450818 -57538116 + (CA)n Simple_repeat Simple_repeat 2 40 0 3150 304 62 43 chr18 28450818 28451903 -57537031 + L1MEc LINE L1 896 1938 -638 450 255 56 6 chr18 28451998 28452159 -57536775 + HAL1 LINE L1 2031 2199 -308 1096 193 39 12 chr18 28452175 28452429 -57536505 + MER45B DNA AcHobo 779 1039 -1 22 0 0 0 chr18 28452503 28452525 -57536409 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr18 28453935 28453975 -57534959 + AT_rich Low_complexity Low_complexity 1 40 0 1864 154 45 21 chr18 28454919 28454983 -57533951 - MER1B DNA MER1_type -2373 339 278 366 23 0 0 chr18 28454983 28455026 -57533908 + (TG)n Simple_repeat Simple_repeat 2 44 0 1864 154 45 21 chr18 28455026 28455292 -57533642 - MER1B DNA MER1_type -2434 278 1 570 277 170 0 chr18 28456297 28456521 -57532413 - MIR SINE MIR 0 262 1 22 35 0 0 chr18 28458416 28458445 -57530489 + AT_rich Low_complexity Low_complexity 1 29 0 2175 107 3 31 chr18 28459029 28459346 -57529588 + AluSg1 SINE Alu 1 308 -1 222 37 0 0 chr18 28459473 28459500 -57529434 + (A)n Simple_repeat Simple_repeat 1 27 0 337 296 105 20 chr18 28459965 28460117 -57528817 - L1MEc LINE L1 -4604 2518 2354 1158 298 54 11 chr18 28460157 28460604 -57528330 - L1MEc LINE L1 -5157 1266 801 893 296 106 31 chr18 28460687 28461726 -57527208 + L1MEc LINE L1 2910 4026 -2189 329 190 38 38 chr18 28461750 28461908 -57527026 + (TAAA)n Simple_repeat Simple_repeat 1 158 0 279 289 72 82 chr18 28461922 28462116 -57526818 + L1MEc LINE L1 4096 4287 -1928 * 1740 228 24 17 chr18 28462106 28462528 -57526406 + L1MC3 LINE L1 7155 7579 -206 737 180 46 21 chr18 28462528 28462640 -57526294 + L1MC2 LINE L1 6131 6252 -92 1328 81 19 128 chr18 28462640 28462898 -57526036 + MER30 DNA MER1_type 1 230 0 737 180 46 21 chr18 28462898 28462979 -57525955 + L1MC2 LINE L1 6252 6329 -15 1766 167 0 10 chr18 28462979 28463273 -57525661 + AluSx SINE Alu 1 291 -21 5673 16 0 1 chr18 28464558 28465359 -57523575 + L1PA2 LINE L1 5112 5911 -244 26 30 0 0 chr18 28465512 28465545 -57523389 + AT_rich Low_complexity Low_complexity 1 33 0 208 186 23 0 chr18 28466125 28466168 -57522766 + CT-rich Low_complexity Low_complexity 4 47 0 1377 171 103 8 chr18 28466283 28466535 -57522399 + AluJb SINE Alu 15 290 -22 4070 158 18 49 chr18 28466537 28467295 -57521639 - L1MA7 LINE L1 -3 6288 5559 1842 176 7 3 chr18 28467295 28467602 -57521332 - AluSx SINE Alu -4 308 1 4070 158 18 49 chr18 28467602 28467722 -57521212 - L1MA7 LINE L1 -732 5559 5437 331 318 104 21 chr18 28468554 28468746 -57520188 + MIR SINE MIR 49 256 -6 1566 152 11 30 chr18 28469780 28470050 -57518884 + AluSx SINE Alu 39 303 -9 260 277 12 0 chr18 28470446 28470529 -57518405 - L1MEd LINE L1 -6033 86 3 27 0 0 0 chr18 28470950 28470977 -57517957 + AT_rich Low_complexity Low_complexity 1 27 0 1696 282 80 12 chr18 28471419 28472007 -57516927 + L1ME2 LINE L1 38 665 -5731 1288 229 28 11 chr18 28472004 28472358 -57516576 + L1ME2 LINE L1 3763 4122 -2093 * 309 288 71 35 chr18 28472378 28472576 -57516358 + L1ME2 LINE L1 4231 4435 -1780 2759 225 31 4 chr18 28472592 28473139 -57515795 + MER68 LTR ERV1 1 562 0 762 264 57 28 chr18 28473140 28473458 -57515476 + L1ME2 LINE L1 4448 4774 -1441 638 259 82 5 chr18 28473483 28473703 -57515231 + L1ME2 LINE L1 4852 5088 -1127 1539 187 92 14 chr18 28473703 28474051 -57514883 - THE1C LTR MaLR 0 375 1 9469 134 34 12 chr18 28474051 28475596 -57513338 - THE1C-int LTR MaLR 0 1580 1 1793 157 70 14 chr18 28475603 28475948 -57512986 - THE1C LTR MaLR -11 364 1 9296 142 10 10 chr18 28475972 28478461 -57510473 + L1PA13 LINE L1 3663 6163 0 2469 252 57 27 chr18 28478454 28478530 -57510404 + L1ME2 LINE L1 5109 5181 -1222 * 1970 89 46 7 chr18 28478530 28478811 -57510123 + AluY SINE Alu 1 292 -19 2469 252 57 27 chr18 28478811 28479785 -57509149 + L1ME2 LINE L1 5181 6362 -41 1995 89 7 34 chr18 28479908 28480232 -57508702 + AluSq SINE Alu 1 316 0 336 375 37 45 chr18 28480460 28480812 -57508122 + L3 LINE CR1 73 421 -1156 28 48 0 0 chr18 28480857 28480899 -57508035 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr18 28481166 28481188 -57507746 + AT_rich Low_complexity Low_complexity 1 22 0 2246 97 7 3 chr18 28482746 28483056 -57505878 + AluSq SINE Alu 3 313 0 1364 249 40 56 chr18 28483496 28484014 -57504920 - L1ME2 LINE L1 -22 6142 5633 1266 290 191 12 chr18 28484014 28484665 -57504269 + LTR41 LTR ERVL 1 767 -6 976 233 65 18 chr18 28484668 28485148 -57503786 - L1ME2 LINE L1 -527 5637 5126 336 313 8 16 chr18 28485182 28485310 -57503624 - L1ME2 LINE L1 -1144 5002 4876 240 289 70 23 chr18 28485319 28485447 -57503487 - L1ME2 LINE L1 -1978 4168 4035 3092 244 85 16 chr18 28485464 28486714 -57502220 - L1ME1 LINE L1 -5 6161 4817 21 36 0 0 chr18 28486856 28486884 -57502050 + AT_rich Low_complexity Low_complexity 1 28 0 651 319 94 18 chr18 28486909 28487864 -57501070 + L1ME3 LINE L1 4131 5158 -988 875 293 79 29 chr18 28488044 28488637 -57500297 + L1ME3 LINE L1 5329 5951 -211 3684 180 43 96 chr18 28489845 28490937 -57497997 + L1MA9 LINE L1 5127 6275 -37 2080 87 25 0 chr18 28490937 28491223 -57497711 + AluY SINE Alu 1 293 -18 3684 180 43 96 chr18 28491223 28491246 -57497688 + L1MA9 LINE L1 6275 6155 -157 201 74 0 0 chr18 28491246 28491273 -57497661 + (CA)n Simple_repeat Simple_repeat 2 28 0 3684 180 43 96 chr18 28491273 28491423 -57497511 + L1MA9 LINE L1 6154 6310 -2 554 245 113 6 chr18 28491787 28491946 -57496988 + MER45C DNA AcHobo 1 176 -777 242 348 156 35 chr18 28492039 28492321 -57496613 + MER45C DNA AcHobo 309 624 -329 309 170 19 0 chr18 28492325 28492378 -57496556 + MER45C DNA AcHobo 900 953 0 245 287 128 0 chr18 28492571 28492665 -57496269 - MIR SINE MIR -84 178 73 187 342 79 33 chr18 28492833 28492985 -57495949 - L2 LINE L2 -467 2847 2689 893 218 11 5 chr18 28493795 28493983 -57494951 + MER5A DNA MER1_type 1 189 0 263 271 0 17 chr18 28495627 28495686 -57493248 - L3 LINE CR1 -11 1566 1509 313 126 69 11 chr18 28495947 28496034 -57492900 + CT-rich Low_complexity Low_complexity 2 93 0 466 29 29 0 chr18 28496764 28496832 -57492102 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 3017 268 109 31 chr18 28497567 28498946 -57489988 + L1MEc LINE L1 37 1523 -4873 321 382 0 7 chr18 28499097 28499233 -57489701 + MIR SINE MIR 128 262 0 306 36 73 0 chr18 28499976 28500031 -57488903 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 280 330 12 12 chr18 28500073 28500246 -57488688 + (TA)n Simple_repeat Simple_repeat 2 174 0 36 40 0 0 chr18 28501743 28501793 -57487141 + AT_rich Low_complexity Low_complexity 1 50 0 27 29 0 0 chr18 28502064 28502098 -57486836 + AT_rich Low_complexity Low_complexity 1 34 0 26 74 0 0 chr18 28502256 28502310 -57486624 + AT_rich Low_complexity Low_complexity 1 54 0 4832 47 2 5 chr18 28502370 28503033 -57485901 + L1P2 LINE L1 4781 5443 -711 772 243 5 28 chr18 28503135 28503353 -57485581 + L1MEc LINE L1 2445 2657 -3558 286 196 147 0 chr18 28503353 28503455 -57485479 + L1MEc LINE L1 2872 2988 -3227 * 4128 222 58 6 chr18 28503432 28505159 -57483775 + L1MB8 LINE L1 4427 6246 -1 552 292 62 25 chr18 28505158 28505593 -57483341 + L1MEc LINE L1 2941 3391 -2824 * 905 256 46 29 chr18 28505616 28505964 -57482970 + L1MEc LINE L1 3559 3912 -2303 3895 61 4 4 chr18 28505967 28506492 -57482442 - L1P LINE L1 -2485 3661 3137 5886 47 0 0 chr18 28506492 28507216 -57481718 + L1PA5 LINE L1 5429 6153 -1 183 129 0 0 chr18 28507668 28507699 -57481235 + (T)n Simple_repeat Simple_repeat 1 31 0 1349 205 3 34 chr18 28508628 28508926 -57480008 - AluJo SINE Alu -8 304 16 715 208 66 8 chr18 28508927 28509250 -57479684 - L1MD1 LINE L1 -189 6447 5943 609 300 80 16 chr18 28509251 28509643 -57479291 - L1MD1 LINE L1 -863 5677 5243 2181 172 37 28 chr18 28509680 28510115 -57478819 + Tigger2 DNA MER2_type 2280 2718 0 1294 263 91 10 chr18 28510192 28510678 -57478256 - L1MD1 LINE L1 -1576 4964 4440 323 303 43 40 chr18 28510677 28510903 -57478031 - L1MD1 LINE L1 -2576 3964 3734 * 2200 74 3 7 chr18 28510903 28511209 -57477725 - AluY SINE Alu 0 305 1 323 303 43 40 chr18 28511209 28511258 -57477676 - L1MD1 LINE L1 -2806 3734 3687 1250 306 43 10 chr18 28511278 28511676 -57477258 - L1MD1 LINE L1 -5446 1094 684 920 309 99 62 chr18 28511910 28512567 -57476367 + L1M3d LINE L1 11 691 -5200 1402 264 101 5 chr18 28512685 28513249 -57475685 + L1MC/D LINE L1 1801 2418 -4189 1393 171 30 33 chr18 28513254 28513559 -57475375 + L1MA10 LINE L1 6028 6331 -3 314 320 120 13 chr18 28514109 28514259 -57474675 + MIR SINE MIR 85 250 -12 1379 268 66 5 chr18 28514705 28515292 -57473642 + L1MC/D LINE L1 2347 2972 -3454 235 194 60 0 chr18 28515504 28515571 -57473363 + L1MC/D LINE L1 5513 5583 -843 6903 64 2 2 chr18 28515593 28516602 -57472332 + L1PA7 LINE L1 5145 6153 -1 220 286 24 36 chr18 28516607 28516691 -57472243 + MIR SINE MIR 180 262 0 489 220 47 13 chr18 28516729 28516879 -57472055 + L1MC/D LINE L1 5627 5781 -2284 427 195 20 174 chr18 28516880 28517094 -57471840 + L1MA10 LINE L1 5952 6291 -43 2262 278 72 16 chr18 28517444 28518604 -57470330 - L1M4 LINE L1 -2215 3931 2708 876 248 23 23 chr18 28519232 28519450 -57469484 - MER20 DNA MER1_type 0 219 2 474 279 19 31 chr18 28519633 28519794 -57469140 + MER5B DNA MER1_type 2 160 -18 707 284 99 23 chr18 28520456 28520840 -57468094 - LTR16A1 LTR ERVL -42 415 3 921 195 6 0 chr18 28521096 28521270 -57467664 + AluJb SINE Alu 137 311 -1 777 239 42 114 chr18 28521362 28521722 -57467212 - L2 LINE L2 0 3313 2980 31 58 0 0 chr18 28522050 28522102 -57466832 + AT_rich Low_complexity Low_complexity 1 52 0 25 31 0 0 chr18 28523498 28523530 -57465404 + AT_rich Low_complexity Low_complexity 1 32 0 2476 62 0 3 chr18 28523579 28523886 -57465048 - AluY SINE Alu -5 306 1 360 180 0 50 chr18 28524012 28524096 -57464838 - AluJ/FRAM SINE Alu -7 295 226 198 326 35 12 chr18 28524274 28524360 -57464574 - L2 LINE L2 -246 3026 2939 316 288 12 88 chr18 28525241 28525411 -57463523 + MER5A DNA MER1_type 2 158 -31 606 299 33 66 chr18 28525654 28525694 -57463240 - MER115 DNA AcHobo -41 652 612 2758 71 98 0 chr18 28525694 28526102 -57462832 - LTR7 LTR ERV1 -2 448 1 606 299 33 66 chr18 28526102 28526332 -57462602 - MER115 DNA AcHobo -81 612 391 795 229 0 0 chr18 28526750 28526903 -57462031 - FRAM SINE Alu -13 153 1 397 316 53 0 chr18 28526926 28527040 -57461894 - L2 LINE L2 -1 3312 3193 186 300 50 20 chr18 28527041 28527141 -57461793 - L3 LINE CR1 -73 1504 1402 2289 55 14 0 chr18 28527437 28527726 -57461208 + AluY SINE Alu 1 293 -18 3986 84 15 2 chr18 28527941 28528487 -57460447 - MER41A LTR ERV1 0 554 2 1225 219 67 79 chr18 28528531 28528947 -57459987 - MER110 LTR ERV1 -2 489 79 247 254 51 0 chr18 28529004 28529063 -57459871 - MER110 LTR ERV1 -429 62 1 22 70 0 0 chr18 28529250 28529293 -57459641 + AT_rich Low_complexity Low_complexity 1 43 0 1180 224 108 77 chr18 28530251 28530786 -57458148 + MER92C LTR ERV1 1 552 -2 216 206 0 59 chr18 28530800 28530868 -57458066 + T-rich Low_complexity Low_complexity 2 65 0 197 159 23 0 chr18 28531363 28531407 -57457527 + (CA)n Simple_repeat Simple_repeat 2 46 0 2782 178 30 84 chr18 28532994 28533192 -57455742 - MER4D LTR ERV1 0 903 696 2183 176 13 2 chr18 28533192 28533590 -57455344 + MER57A LTR ERV1 2 403 0 2782 178 30 84 chr18 28533590 28534095 -57454839 - MER4D LTR ERV1 -207 696 238 216 0 0 0 chr18 28534128 28534152 -57454782 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1415 208 40 3 chr18 28534162 28534460 -57454474 - MER49 LTR ERV1 -614 309 1 3621 161 14 3 chr18 28534626 28535254 -57453680 - MER41B LTR ERV1 0 635 1 22 56 0 0 chr18 28535394 28535430 -57453504 + AT_rich Low_complexity Low_complexity 1 36 0 309 276 77 8 chr18 28537833 28538005 -57450929 - LTR16C LTR ERVL -1 490 270 22 35 0 0 chr18 28538786 28538815 -57450119 + AT_rich Low_complexity Low_complexity 1 29 0 214 422 37 0 chr18 28539085 28539194 -57449740 - MIR SINE MIR -64 144 32 260 384 61 37 chr18 28539292 28539586 -57449348 + LTR67 LTR ERVL 4 304 -253 384 257 14 57 chr18 28539621 28539761 -57449173 + MIR SINE MIR 128 261 -1 278 329 109 24 chr18 28539803 28540013 -57448921 + L2 LINE L2 1728 1955 -1359 801 234 5 33 chr18 28540026 28540210 -57448724 + AluJo SINE Alu 126 304 -8 268 311 11 22 chr18 28540358 28540448 -57448486 + L2 LINE L2 3218 3306 -7 189 0 0 0 chr18 28540496 28540517 -57448417 + (TG)n Simple_repeat Simple_repeat 2 22 0 307 341 64 12 chr18 28542900 28543073 -57445861 - MER5A DNA MER1_type 0 189 8 1764 199 9 3 chr18 28545526 28545868 -57443066 - L1MCa LINE L1 -6081 345 2 252 233 39 48 chr18 28545958 28546061 -57442873 + HsTC2 DNA Tc2 2 103 -1795 254 131 33 0 chr18 28546321 28546382 -57442552 + (TCTCTG)n Simple_repeat Simple_repeat 4 66 0 335 199 120 9 chr18 28546431 28546577 -57442357 + HsTC2 DNA Tc2 1738 1896 -2 456 233 189 22 chr18 28546579 28546759 -57442175 - MER63A DNA MER1_type 0 210 1 231 261 22 65 chr18 28547617 28547709 -57441225 + L2 LINE L2 3219 3306 -7 180 176 0 0 chr18 28547765 28547799 -57441135 + (TA)n Simple_repeat Simple_repeat 1 34 0 725 460 119 28 chr18 28548851 28549136 -57439798 - MER7A DNA MER2_type -36 310 2 230 238 0 0 chr18 28550998 28551040 -57437894 + (CA)n Simple_repeat Simple_repeat 2 43 0 25 0 0 0 chr18 28552249 28552274 -57436660 + AT_rich Low_complexity Low_complexity 1 25 0 212 220 20 0 chr18 28552357 28552407 -57436527 + (TA)n Simple_repeat Simple_repeat 1 51 0 229 262 0 0 chr18 28552407 28552468 -57436466 - L1MC4 LINE L1 -1337 6705 6645 182 146 49 73 chr18 28552890 28552931 -57436003 - MIR SINE MIR -6 256 217 225 0 0 0 chr18 28553721 28553746 -57435188 + (TTTTTG)n Simple_repeat Simple_repeat 6 30 0 839 158 0 0 chr18 28555151 28555284 -57433650 + AluSq/x SINE Alu 1 133 -180 1079 154 0 0 chr18 28555442 28555620 -57433314 + AluSp SINE Alu 130 307 0 325 333 43 64 chr18 28555933 28556167 -57432767 + L3 LINE CR1 1202 1430 -147 192 328 0 0 chr18 28556277 28556338 -57432596 - MIR SINE MIR 0 262 202 23 54 0 0 chr18 28556774 28556811 -57432123 + AT_rich Low_complexity Low_complexity 1 37 0 21 57 0 0 chr18 28556937 28556972 -57431962 + AT_rich Low_complexity Low_complexity 1 35 0 307 295 62 8 chr18 28558115 28558244 -57430690 + L1M4 LINE L1 3985 4120 -2026 507 273 163 55 chr18 28558417 28559079 -57429855 + L1M4 LINE L1 4356 5130 -1016 1694 180 7 3 chr18 28559079 28559373 -57429561 - AluSx SINE Alu -17 295 1 507 273 163 55 chr18 28559373 28559553 -57429381 + L1M4 LINE L1 5130 5289 -857 1453 284 62 8 chr18 28559632 28560118 -57428816 + LTR26 LTR ERV1 92 603 0 4826 157 57 32 chr18 28561807 28562741 -57426193 - L1MC1 LINE L1 -5 6328 5372 31 44 0 0 chr18 28562801 28562846 -57426088 + AT_rich Low_complexity Low_complexity 1 45 0 223 279 147 23 chr18 28562937 28563066 -57425868 + MIR SINE MIR 53 197 -65 247 260 40 0 chr18 28563105 28563205 -57425729 + T-rich Low_complexity Low_complexity 2 105 0 1003 206 14 5 chr18 28564254 28564477 -57424457 - L1MC3 LINE L1 -11 7774 7550 23 33 0 0 chr18 28564689 28564719 -57424215 + AT_rich Low_complexity Low_complexity 1 30 0 2602 101 3 6 chr18 28564934 28565299 -57423635 - THE1B LTR MaLR 0 364 1 31 0 0 0 chr18 28565716 28565747 -57423187 + AT_rich Low_complexity Low_complexity 1 31 0 591 229 53 53 chr18 28566380 28566550 -57422384 + L1ME1 LINE L1 32 201 -6195 3816 56 8 0 chr18 28566657 28567143 -57421791 - L1P3 LINE L1 -333 5821 5332 3670 286 70 18 chr18 28567155 28569300 -57419634 + L1ME1 LINE L1 235 2647 -3568 9360 219 30 16 chr18 28569300 28570872 -57418062 - L1P LINE L1 -1730 4416 2809 6014 103 24 1 chr18 28570872 28572408 -57416526 - L1PA11 LINE L1 -3 6171 4597 9360 219 30 16 chr18 28572408 28572894 -57416040 - L1P LINE L1 -3337 2809 2331 2869 144 2 7 chr18 28572890 28573347 -57415587 + L1PA13 LINE L1 5686 6140 -23 * 466 245 49 0 chr18 28573348 28573491 -57415443 + L1ME1 LINE L1 4178 4327 -1888 312 212 0 0 chr18 28573659 28573725 -57415209 + L1ME1 LINE L1 4364 4429 -1786 451 211 74 0 chr18 28573747 28573842 -57415092 + U6 snRNA snRNA 2 103 -4 1338 162 4 4 chr18 28573856 28574103 -57414831 + L1MB3 LINE L1 5921 6167 -16 21984 96 24 2 chr18 28574110 28578134 -57410800 - L1PA7 LINE L1 -16 6138 2028 2507 225 51 52 chr18 28578222 28578603 -57410331 + L1ME1 LINE L1 4743 5123 -1112 620 237 106 15 chr18 28578603 28578801 -57410133 - MER20 DNA MER1_type 0 219 4 2507 225 51 52 chr18 28578801 28579110 -57409824 + L1ME1 LINE L1 5123 5431 -804 334 176 0 14 chr18 28579110 28579184 -57409750 + L1MA8 LINE L1 6208 6280 -11 2507 225 51 52 chr18 28579184 28579212 -57409722 + L1ME1 LINE L1 5431 5458 -777 2019 199 49 5 chr18 28579212 28579620 -57409314 - MSTB LTR MaLR 0 426 1 2507 225 51 52 chr18 28579620 28580337 -57408597 + L1ME1 LINE L1 5458 6165 -70 399 203 301 0 chr18 28580257 28580380 -57408554 + L1MA10 LINE L1 6244 6403 0 * 880 329 39 12 chr18 28581723 28582124 -57406810 - LTR16A1 LTR ERVL -3 481 66 268 316 124 43 chr18 28582659 28582836 -57406098 + MER5B DNA MER1_type 1 178 0 23 0 0 0 chr18 28583579 28583602 -57405332 + AT_rich Low_complexity Low_complexity 1 23 0 802 114 0 8 chr18 28584180 28584312 -57404622 + L1PB1 LINE L1 6021 6151 0 25 31 0 0 chr18 28585042 28585074 -57403860 + AT_rich Low_complexity Low_complexity 1 32 0 1266 180 149 28 chr18 28585980 28586302 -57402632 + MLT1A1 LTR MaLR 5 365 0 231 253 0 48 chr18 28587418 28587501 -57401433 + CT-rich Low_complexity Low_complexity 3 81 0 396 341 76 29 chr18 28588978 28589254 -57399680 - L1ME3A LINE L1 -288 5882 5594 21 57 0 0 chr18 28589707 28589742 -57399192 + AT_rich Low_complexity Low_complexity 1 35 0 381 260 39 49 chr18 28590402 28590606 -57398328 - L1MEd LINE L1 -4910 1209 1008 22 35 0 0 chr18 28590878 28590907 -57398027 + AT_rich Low_complexity Low_complexity 1 29 0 294 29 0 0 chr18 28592436 28592471 -57396463 + (CA)n Simple_repeat Simple_repeat 2 36 0 237 33 0 0 chr18 28593374 28593404 -57395530 + (TG)n Simple_repeat Simple_repeat 1 30 0 555 297 46 0 chr18 28593827 28594002 -57394932 + MIR SINE MIR 3 185 -77 2231 98 0 3 chr18 28597769 28598065 -57390869 + AluSc SINE Alu 1 295 -14 1055 161 0 17 chr18 28598237 28598417 -57390517 + AluJo SINE Alu 1 177 -135 456 19 0 0 chr18 28598492 28598545 -57390389 + (TG)n Simple_repeat Simple_repeat 2 54 0 266 214 67 11 chr18 28598545 28598634 -57390300 + L1MC4 LINE L1 6614 6707 -1335 586 268 73 6 chr18 28598985 28599149 -57389785 - MER5B DNA MER1_type -1 177 3 210 402 18 18 chr18 28600073 28600185 -57388749 - MIR SINE MIR -128 134 23 1218 234 44 25 chr18 28600367 28600730 -57388204 - MLT1A2 LTR MaLR -3 371 2 28 0 0 0 chr18 28601316 28601344 -57387590 + AT_rich Low_complexity Low_complexity 1 28 0 185 32 0 65 chr18 28601344 28601375 -57387559 + (CAAAA)n Simple_repeat Simple_repeat 5 33 0 277 403 0 35 chr18 28601425 28601569 -57387365 - MIR3 SINE MIR -46 162 24 213 341 44 22 chr18 28601802 28601893 -57387041 + L2 LINE L2 2437 2529 -785 261 279 98 71 chr18 28602022 28602205 -57386729 + MIR SINE MIR 46 233 -29 274 306 153 28 chr18 28602215 28602431 -57386503 + MIR SINE MIR 20 262 0 24 53 0 0 chr18 28602800 28602838 -57386096 + AT_rich Low_complexity Low_complexity 1 38 0 1864 106 39 11 chr18 28603167 28603451 -57385483 - AluSx SINE Alu -20 292 1 244 316 88 29 chr18 28606205 28606376 -57382558 - MIR SINE MIR -70 192 12 1332 121 5 9 chr18 28608158 28608373 -57380561 + L1PB1 LINE L1 5935 6148 -3 21 82 0 0 chr18 28608373 28608422 -57380512 + AT_rich Low_complexity Low_complexity 1 49 0 240 195 0 0 chr18 28608492 28608533 -57380401 - MARNA DNA Mariner -376 210 170 186 319 99 0 chr18 28609365 28609456 -57379478 + MIR SINE MIR 146 245 -17 1070 184 25 128 chr18 28610254 28610661 -57378273 + MLT1A1 LTR MaLR 1 365 0 275 267 75 42 chr18 28610863 28610983 -57377951 - MER5B DNA MER1_type -1 177 54 373 271 73 13 chr18 28612153 28612304 -57376630 - MIR3 SINE MIR -2 206 47 851 259 123 55 chr18 28612952 28613466 -57375468 - MLT1H LTR MaLR 0 549 1 239 338 12 12 chr18 28613513 28613593 -57375341 - MIR SINE MIR -152 110 31 969 322 49 53 chr18 28613647 28614173 -57374761 + L2 LINE L2 2561 3086 -227 186 349 134 41 chr18 28614238 28614410 -57374524 + L2 LINE L2 3126 3313 0 182 288 118 88 chr18 28615690 28615860 -57373074 - L2 LINE L2 0 3313 3139 301 102 34 0 chr18 28615885 28615944 -57372990 + L1MB8 LINE L1 6118 6178 0 292 372 26 19 chr18 28616288 28616444 -57372490 + MER5A DNA MER1_type 2 158 -31 286 285 90 72 chr18 28616776 28617109 -57371825 + L1M4 LINE L1 80 720 -5702 1698 263 86 63 chr18 28617379 28617819 -57371115 + L1M4 LINE L1 814 1242 -5880 204 40 0 0 chr18 28617819 28617844 -57371090 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1698 263 86 63 chr18 28617844 28619441 -57369493 + L1M4 LINE L1 1242 3093 -4029 1685 190 44 65 chr18 28619463 28620130 -57368804 + L1M4 LINE L1 5650 6292 -677 473 65 0 0 chr18 28620128 28620190 -57368744 - L1P LINE L1 -1392 4754 4693 * 2449 86 14 3 chr18 28620265 28620616 -57368318 + L1PA13 LINE L1 5805 6159 -4 439 152 13 0 chr18 28620731 28620810 -57368124 - MADE1 DNA Mariner 0 80 1 1778 226 62 45 chr18 28622667 28623248 -57365686 - L1ME1 LINE L1 -20 6146 5556 2561 147 17 2 chr18 28624220 28624642 -57364292 + MSTA LTR MaLR 1 428 0 688 230 27 16 chr18 28625423 28625610 -57363324 + MER53 DNA DNA 1 189 0 1050 315 119 32 chr18 28625989 28627080 -57361854 - HAL1 LINE L1 -670 1837 652 206 344 22 11 chr18 28627617 28627707 -57361227 + MIR SINE MIR 25 115 -147 343 250 191 0 chr18 28627964 28628100 -57360834 + MIR SINE MIR 72 233 -29 617 294 46 5 chr18 28628182 28628376 -57360558 - MIR SINE MIR -60 202 1 1858 281 56 11 chr18 28630996 28631619 -57357315 - L1ME3A LINE L1 -57 6113 5463 368 269 65 27 chr18 28631640 28631826 -57357108 - L1ME3A LINE L1 -814 5332 5140 5257 145 23 3 chr18 28632540 28632885 -57356049 - L1PB4 LINE L1 -8 6148 5812 231 88 0 0 chr18 28632885 28632919 -57356015 + (TG)n Simple_repeat Simple_repeat 2 35 0 5257 145 23 3 chr18 28632919 28633576 -57355358 - L1PB4 LINE L1 -344 5812 5127 4210 170 12 31 chr18 28633571 28634901 -57354033 - L1P5 LINE L1 -428 5728 4412 * 28 91 0 0 chr18 28636192 28636269 -57352665 + AT_rich Low_complexity Low_complexity 1 77 0 447 19 0 0 chr18 28637155 28637207 -57351727 + (TG)n Simple_repeat Simple_repeat 2 53 0 1687 193 22 17 chr18 28637207 28637565 -57351369 - MLT1A1 LTR MaLR -4 361 2 565 236 8 0 chr18 28637890 28638013 -57350921 + MIR SINE MIR 66 189 -73 429 329 61 20 chr18 28638340 28638586 -57350348 + MIR SINE MIR 1 256 -6 297 0 0 0 chr18 28639095 28639128 -57349806 + (TG)n Simple_repeat Simple_repeat 2 34 0 1598 173 53 7 chr18 28639208 28639492 -57349442 + AluSx SINE Alu 1 297 -15 611 63 0 32 chr18 28639496 28639591 -57349343 + AluY SINE Alu 41 132 -179 1314 219 137 0 chr18 28639712 28640027 -57348907 + MLT1A1 LTR MaLR 6 363 -2 240 314 159 45 chr18 28640587 28641027 -57347907 + L2 LINE L2 1799 2288 -1026 309 323 40 24 chr18 28641031 28641155 -57347779 + L2 LINE L2 2649 2774 -540 814 162 113 164 chr18 28642454 28642999 -57345935 - MER66A LTR ERV1 -23 504 100 308 284 0 60 chr18 28643096 28643212 -57345722 + L1MC4 LINE L1 6595 6703 -1339 207 184 0 0 chr18 28643212 28643250 -57345684 + (CATA)n Simple_repeat Simple_repeat 4 41 0 2162 35 39 77 chr18 28643369 28643681 -57345253 + AluY SINE Alu 1 300 -11 1116 47 0 82 chr18 28643974 28644144 -57344790 + AluY SINE Alu 146 301 -10 22 0 0 0 chr18 28644665 28644687 -57344247 + AT_rich Low_complexity Low_complexity 1 22 0 515 299 115 1 chr18 28644845 28645165 -57343769 - L1ME LINE L1 -370 5751 5384 180 219 0 0 chr18 28645256 28645297 -57343637 + CT-rich Low_complexity Low_complexity 1 41 0 27 49 0 0 chr18 28645498 28645539 -57343395 + AT_rich Low_complexity Low_complexity 1 41 0 285 75 0 0 chr18 28645721 28645761 -57343173 + (CTATT)n Simple_repeat Simple_repeat 3 42 0 270 282 9 18 chr18 28645763 28645873 -57343061 + (CCTAT)n Simple_repeat Simple_repeat 1 109 0 22 0 0 0 chr18 28646072 28646094 -57342840 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr18 28646265 28646296 -57342638 + AT_rich Low_complexity Low_complexity 1 31 0 1191 170 54 9 chr18 28646984 28647090 -57341844 - AluJo SINE Alu -73 239 139 369 0 0 0 chr18 28647090 28647131 -57341803 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1191 170 54 9 chr18 28647131 28647247 -57341687 - AluJo SINE Alu -173 139 7 25 0 0 0 chr18 28647485 28647510 -57341424 + AT_rich Low_complexity Low_complexity 1 25 0 375 282 181 53 chr18 28647597 28647710 -57341224 - L1M4 LINE L1 -2701 3445 3348 2388 185 48 16 chr18 28647710 28648208 -57340726 + MLT2B2 LTR ERVL 1 514 -1 375 282 181 53 chr18 28648208 28648491 -57340443 - L1M4 LINE L1 -2798 3348 2998 245 303 139 32 chr18 28648803 28649054 -57339880 - HAL1 LINE L1 -848 1659 1382 246 346 13 13 chr18 28649087 28649243 -57339691 - L1MEd LINE L1 -5959 160 5 21 36 0 0 chr18 28650247 28650275 -57338659 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr18 28651113 28651137 -57337797 + AT_rich Low_complexity Low_complexity 1 24 0 261 137 41 55 chr18 28651148 28651221 -57337713 - L1MC4 LINE L1 -1333 6709 6638 1363 243 80 86 chr18 28651487 28652035 -57336899 - MLT1H1 LTR MaLR -2 553 9 232 365 0 0 chr18 28652711 28652796 -57336138 - MIR3 SINE MIR -13 195 111 1499 254 101 35 chr18 28652902 28653366 -57335568 - MLT1E LTR MaLR -2 591 86 1777 144 64 25 chr18 28653366 28653727 -57335207 - THE1C LTR MaLR 0 375 1 1499 254 101 35 chr18 28653727 28653797 -57335137 - MLT1E LTR MaLR -507 86 22 29 28 0 0 chr18 28653817 28653853 -57335081 + AT_rich Low_complexity Low_complexity 1 36 0 220 211 0 0 chr18 28654465 28654503 -57334431 + (CATATA)n Simple_repeat Simple_repeat 4 41 0 600 102 33 6 chr18 28655585 28655702 -57333232 + MLT1B LTR MaLR 305 386 -4 2198 103 0 0 chr18 28655965 28656294 -57332640 + AluSc SINE Alu 1 329 0 766 215 23 29 chr18 28656605 28656777 -57332157 - AluJo SINE Alu -20 292 122 375 197 84 0 chr18 28658091 28658162 -57330772 + Tigger3(Golem) DNA MER2_type 1 77 -2952 * 823 183 22 0 chr18 28658160 28658297 -57330637 + Tigger3(Golem) DNA MER2_type 2896 3035 0 1377 240 30 25 chr18 28658391 28658757 -57330177 - MER82 DNA MER2_type -7 646 279 398 207 37 0 chr18 28658807 28658889 -57330045 + Tigger5 DNA MER2_type 2238 2322 -1 1500 181 22 4 chr18 28658889 28659165 -57329769 - MER82 DNA MER2_type -372 281 1 277 333 53 0 chr18 28659214 28659328 -57329606 + MIR SINE MIR 41 160 -102 552 249 185 60 chr18 28660458 28660907 -57328027 + L1MC4a LINE L1 5522 6026 -1782 21 71 0 0 chr18 28661760 28661802 -57327132 + AT_rich Low_complexity Low_complexity 1 42 0 666 122 187 0 chr18 28662064 28662203 -57326731 - L1MA6 LINE L1 -363 5937 5773 533 324 125 4 chr18 28662388 28662791 -57326143 - L2 LINE L2 -139 3174 2722 23 54 0 0 chr18 28662839 28662876 -57326058 + AT_rich Low_complexity Low_complexity 1 37 0 187 389 16 24 chr18 28663289 28663415 -57325519 - L2 LINE L2 -212 3060 2936 452 288 28 28 chr18 28664270 28664427 -57324507 - MIR3 SINE MIR -1 207 50 535 295 27 6 chr18 28667577 28667760 -57321174 + MIR SINE MIR 64 250 -12 3878 224 67 62 chr18 28669241 28670420 -57318514 + L1MC4 LINE L1 6681 7853 -189 1032 231 20 103 chr18 28670420 28670818 -57318116 - MLT1A1 LTR MaLR 0 365 1 3878 224 67 62 chr18 28670818 28670852 -57318082 + L1MC4 LINE L1 7853 7885 -157 428 77 15 0 chr18 28670852 28670917 -57318017 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 3878 224 67 62 chr18 28670917 28671052 -57317882 + L1MC4 LINE L1 7885 8036 -6 23 0 0 0 chr18 28671052 28671075 -57317859 + AT_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr18 28671229 28671265 -57317669 + AT_rich Low_complexity Low_complexity 1 36 0 865 191 38 0 chr18 28672966 28673123 -57315811 + FAM SINE Alu 13 175 -10 225 0 0 0 chr18 28676196 28676221 -57312713 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 24 53 0 0 chr18 28676352 28676390 -57312544 + AT_rich Low_complexity Low_complexity 1 38 0 13193 27 0 0 chr18 28676390 28678712 -57310222 - L1PA2 LINE L1 -10 6145 3823 310 123 0 0 chr18 28678917 28678968 -57309966 - MLT2D LTR ERVL -3 394 350 226 211 0 0 chr18 28678968 28679006 -57309928 + (CGTG)n Simple_repeat Simple_repeat 2 39 0 271 111 19 19 chr18 28679012 28679066 -57309868 + (GA)n Simple_repeat Simple_repeat 2 55 0 1857 172 15 24 chr18 28679115 28679452 -57309482 - MLT2D LTR ERVL -76 338 5 208 377 47 9 chr18 28681360 28681466 -57307468 + MIR SINE MIR 30 139 -69 273 389 61 0 chr18 28682244 28682375 -57306559 - L2 LINE L2 -1 3271 3133 395 128 0 13 chr18 28683243 28683321 -57305613 + (GGGA)n Simple_repeat Simple_repeat 2 78 0 235 341 187 10 chr18 28683326 28683953 -57304981 + HAL1 LINE L1 1047 1784 -723 319 222 208 28 chr18 28684311 28684455 -57304479 + HAL1 LINE L1 2142 2311 -196 29 60 0 0 chr18 28684628 28684678 -57304256 + AT_rich Low_complexity Low_complexity 1 50 0 201 380 43 12 chr18 28685916 28686079 -57302855 + L3 LINE CR1 190 357 -1220 2090 130 0 0 chr18 28686741 28687042 -57301892 + AluSx SINE Alu 11 311 -1 329 278 62 0 chr18 28687729 28687826 -57301108 + L1MC/D LINE L1 4755 4857 -1289 718 314 122 9 chr18 28688172 28688605 -57300329 + L1MC/D LINE L1 5257 5738 -2070 22 0 0 0 chr18 28688649 28688671 -57300263 + AT_rich Low_complexity Low_complexity 1 22 0 207 270 108 36 chr18 28690606 28690717 -57298217 - MIR SINE MIR -10 252 134 22 35 0 0 chr18 28691483 28691512 -57297422 + AT_rich Low_complexity Low_complexity 1 29 0 7205 145 7 13 chr18 28691518 28693854 -57295080 - L1MA1 LINE L1 -4 6298 3970 324 0 0 0 chr18 28693857 28693893 -57295041 + (T)n Simple_repeat Simple_repeat 1 36 0 8811 211 18 10 chr18 28694239 28694592 -57294342 - L1 LINE L1 -1826 5739 5390 2843 6 0 0 chr18 28694592 28694903 -57294031 - AluYa5 SINE Alu 0 311 1 8811 211 18 10 chr18 28694903 28696890 -57292044 - L1 LINE L1 -2175 5390 3379 23 54 0 0 chr18 28697917 28697954 -57290980 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr18 28698034 28698056 -57290878 + AT_rich Low_complexity Low_complexity 1 22 0 2441 101 8 40 chr18 28698284 28698662 -57290272 - THE1C LTR MaLR 0 375 10 189 121 0 0 chr18 28699900 28699933 -57289001 + (CA)n Simple_repeat Simple_repeat 1 33 0 635 278 67 26 chr18 28700437 28700707 -57288227 + L2 LINE L2 3032 3312 -1 437 306 72 25 chr18 28700726 28700961 -57287973 - LTR16A1 LTR ERVL -2 455 210 252 280 145 85 chr18 28701207 28701407 -57287527 - MIR SINE MIR -50 212 1 26 0 0 0 chr18 28702311 28702337 -57286597 + AT_rich Low_complexity Low_complexity 1 26 0 588 316 110 12 chr18 28703113 28703531 -57285403 - L1ME4a LINE L1 -251 5870 5412 2238 86 3 16 chr18 28705372 28705675 -57283259 - AluY SINE Alu -12 299 1 182 411 0 0 chr18 28705854 28705910 -57283024 + L2 LINE L2 3229 3284 -29 2141 107 3 3 chr18 28706230 28706519 -57282415 - AluSx SINE Alu -23 289 1 827 271 18 21 chr18 28706733 28707013 -57281921 - LTR4 LTR ERV1 0 596 318 297 220 44 55 chr18 28707290 28707381 -57281553 - LTR4 LTR ERV1 -506 90 1 256 229 0 0 chr18 28708836 28708897 -57280037 + MER4-int LTR ERV1 1105 1165 -5433 770 300 63 36 chr18 28708945 28709471 -57279463 - L1MC4 LINE L1 -231 7811 7272 1812 168 58 3 chr18 28709476 28709803 -57279131 + MER7A DNA MER2_type 1 343 -3 1121 248 159 104 chr18 28709809 28710874 -57278060 - L1MC4 LINE L1 -623 7185 6063 1334 300 91 13 chr18 28710939 28711489 -57277445 - MLT2F LTR ERVL -70 593 1 30 27 0 0 chr18 28711515 28711552 -57277382 + AT_rich Low_complexity Low_complexity 1 37 0 1788 287 85 9 chr18 28711812 28712468 -57276466 - ERVL-F LTR ERVL -332 5432 4727 260 211 19 0 chr18 28712555 28712607 -57276327 - ERVL-F LTR ERVL -1073 4691 4639 1737 239 75 111 chr18 28712609 28714444 -57274490 - L1MC4a LINE L1 -858 5288 4400 2125 184 10 31 chr18 28715125 28715539 -57273395 + MER67D LTR ERV1 5 409 -105 22 0 0 0 chr18 28716808 28716830 -57272104 + AT_rich Low_complexity Low_complexity 1 22 0 246 249 24 3 chr18 28716858 28716932 -57272002 - MIR SINE MIR -48 160 84 683 306 64 6 chr18 28717660 28718072 -57270862 + LTR33 LTR ERVL 3 487 -34 299 287 155 22 chr18 28718157 28718338 -57270596 + MIR SINE MIR 12 216 -46 1077 175 32 74 chr18 28718338 28718676 -57270258 - MER33 DNA MER1_type 0 324 1 3354 166 43 14 chr18 28718706 28719332 -57269602 + LTR48B LTR ERV1 1 644 0 1477 171 104 7 chr18 28719440 28719749 -57269185 - MER44D DNA MER2_type 0 609 1 26 30 0 0 chr18 28719843 28719876 -57269058 + AT_rich Low_complexity Low_complexity 1 33 0 397 319 9 0 chr18 28720273 28720386 -57268548 + L2 LINE L2 3198 3311 -2 1889 274 35 5 chr18 28721035 28721600 -57267334 - L1ME3A LINE L1 -5 6165 5584 209 33 33 0 chr18 28721699 28721729 -57267205 + (TA)n Simple_repeat Simple_repeat 1 31 0 1652 137 0 0 chr18 28722278 28722527 -57266407 + AluSq SINE Alu 58 306 -7 24 53 0 0 chr18 28722552 28722590 -57266344 + AT_rich Low_complexity Low_complexity 1 38 0 643 50 0 0 chr18 28722933 28723013 -57265921 + MADE1 DNA Mariner 1 80 0 2190 96 4 101 chr18 28723342 28723824 -57265110 - MER1A DNA MER1_type -1 532 94 452 263 26 20 chr18 28723824 28723976 -57264958 - L1 LINE L1 -1038 5108 4956 6174 79 1 35 chr18 28723976 28724599 -57264335 + L1PB1 LINE L1 5159 5739 -412 252 0 0 0 chr18 28724599 28724627 -57264307 + (TG)n Simple_repeat Simple_repeat 2 29 0 6174 79 1 35 chr18 28724627 28725026 -57263908 + L1PB1 LINE L1 5739 6150 -1 606 211 0 0 chr18 28725047 28725161 -57263773 - MER1A DNA MER1_type -413 114 1 1481 223 121 24 chr18 28725264 28725851 -57263083 + LTR48B LTR ERV1 1 644 0 191 365 65 9 chr18 28726311 28726418 -57262516 - L2 LINE L2 -19 3294 3182 1373 241 90 28 chr18 28726488 28726920 -57262014 - MER39 LTR ERV1 0 707 249 31 0 0 0 chr18 28726990 28727021 -57261913 + AT_rich Low_complexity Low_complexity 1 31 0 184 235 0 0 chr18 28727276 28727310 -57261624 - L2 LINE L2 -257 3056 3023 218 274 0 0 chr18 28727536 28727587 -57261347 + L2 LINE L2 3263 3313 0 2754 206 39 19 chr18 28727626 28727978 -57260956 + MER39 LTR ERV1 75 446 -261 2502 163 14 5 chr18 28727978 28728402 -57260532 + MSTA LTR MaLR 1 428 0 2754 206 39 19 chr18 28728402 28728670 -57260264 + MER39 LTR ERV1 446 707 0 1124 146 53 143 chr18 28729186 28729543 -57259391 + MER39-int LTR ERV1 1372 1696 -4635 1343 267 31 6 chr18 28729570 28729896 -57259038 + MER39-int LTR ERV1 1909 2242 -4089 710 299 35 49 chr18 28730191 28730459 -57258475 + MER39-int LTR ERV1 753 2647 -3684 291 254 28 0 chr18 28730462 28730533 -57258401 + MER31A LTR ERV1 26 98 -387 272 133 0 0 chr18 28730540 28730585 -57258349 - MER54B LTR ERVL -2 791 747 528 164 25 157 chr18 28730594 28730753 -57258181 - MER73 LTR ERVL -496 148 11 388 254 67 2 chr18 28730995 28731136 -57257798 + MER39-int LTR ERV1 1016 1947 -3849 * 495 184 46 112 chr18 28731117 28731184 -57257750 + MER39-int LTR ERV1 1282 1352 -3519 5387 133 12 21 chr18 28731184 28732400 -57256534 + L1PA16 LINE L1 4941 6156 -10 495 184 46 112 chr18 28732400 28732724 -57256210 + MER39-int LTR ERV1 1352 2025 -2846 374 292 28 42 chr18 28732909 28733053 -57255881 + MER39-int LTR ERV1 3264 3405 -2926 29 78 0 0 chr18 28733172 28733236 -57255698 + AT_rich Low_complexity Low_complexity 1 64 0 548 216 78 38 chr18 28733404 28733723 -57255211 + MER39-int LTR ERV1 1925 2256 -2867 7410 202 64 82 chr18 28733773 28734637 -57254297 + MER39-int LTR ERV1 3690 4568 -1763 1707 193 0 16 chr18 28734637 28734948 -57253986 - AluJb SINE Alu -6 306 1 7410 202 64 82 chr18 28734948 28736620 -57252314 + MER39-int LTR ERV1 4568 6181 -150 2762 193 80 7 chr18 28736710 28737286 -57251648 + MER39 LTR ERV1 90 707 0 2449 59 0 3 chr18 28737372 28737676 -57251258 + AluY SINE Alu 1 303 -8 2126 150 94 23 chr18 28739124 28739551 -57249383 - MSTB2 LTR MaLR 0 457 1 893 294 117 35 chr18 28740205 28741034 -57247900 - L1ME3A LINE L1 -16 6154 5258 24 0 0 0 chr18 28741172 28741196 -57247738 + AT_rich Low_complexity Low_complexity 1 24 0 204 40 0 0 chr18 28742286 28742311 -57246623 + (A)n Simple_repeat Simple_repeat 1 25 0 2058 139 106 16 chr18 28742328 28742716 -57246218 - MSTB1 LTR MaLR 0 432 10 860 274 9 18 chr18 28743348 28743574 -57245360 - MER58A DNA MER1_type 0 224 1 304 193 204 23 chr18 28743591 28743622 -57245312 + MER5A DNA MER1_type 9 33 -156 608 259 99 0 chr18 28743622 28743784 -57245150 - MER45A DNA AcHobo 0 178 1 304 193 204 23 chr18 28743784 28743840 -57245094 + MER5A DNA MER1_type 33 112 -77 926 263 74 0 chr18 28744190 28744433 -57244501 + MIR SINE MIR 2 262 0 233 193 18 18 chr18 28744703 28744760 -57244174 + MER58B DNA MER1_type 270 326 -15 1975 121 7 0 chr18 28745256 28745537 -57243397 + AluSp SINE Alu 1 283 -30 7168 40 6 0 chr18 28745537 28747856 -57241078 + L1PA5 LINE L1 3757 6151 -3 835 206 210 32 chr18 28748555 28748865 -57240069 + MLT1A1 LTR MaLR 1 365 0 351 284 30 52 chr18 28750358 28750492 -57238442 + L2 LINE L2 2476 2606 -708 3230 131 33 25 chr18 28750558 28751076 -57237858 + MER1A DNA MER1_type 8 529 0 977 298 110 18 chr18 28751078 28751712 -57237222 + L2 LINE L2 2628 3313 0 29 28 0 0 chr18 28751815 28751851 -57237083 + AT_rich Low_complexity Low_complexity 1 36 0 1189 196 0 25 chr18 28751901 28752136 -57236798 + AluJo SINE Alu 84 312 0 39 68 0 0 chr18 28752205 28752279 -57236655 + AT_rich Low_complexity Low_complexity 1 74 0 279 0 0 0 chr18 28752361 28752392 -57236542 + (CA)n Simple_repeat Simple_repeat 2 32 0 617 279 62 56 chr18 28752738 28753074 -57235860 - MLT1I LTR MaLR -15 394 57 3232 155 111 34 chr18 28753074 28753873 -57235061 + MER4D LTR ERV1 1 870 -2 251 139 23 0 chr18 28753890 28753933 -57235001 - MLT1I LTR MaLR -365 44 1 612 312 89 77 chr18 28754083 28754989 -57233945 + L1MEd LINE L1 43 959 -5160 561 198 156 18 chr18 28754991 28755158 -57233776 - L1MB4 LINE L1 0 6180 5991 * 3178 242 123 36 chr18 28755140 28755467 -57233467 - L1M4 LINE L1 -2520 4124 3827 1751 133 60 7 chr18 28755467 28755752 -57233182 - AluSg SINE Alu -10 300 1 3178 242 123 36 chr18 28755752 28756752 -57232182 - L1M4 LINE L1 -2817 3827 2681 10613 226 37 9 chr18 28756753 28756836 -57232098 + L1MB2 LINE L1 2358 2437 -3734 1798 197 29 9 chr18 28756836 28757176 -57231758 - MER7A DNA MER2_type -1 345 1 10613 226 37 9 chr18 28757176 28760719 -57228215 + L1MB2 LINE L1 2437 6089 -82 920 194 71 5 chr18 28760720 28760824 -57228110 + MER2 DNA MER2_type 2 98 -247 246 62 0 0 chr18 28760824 28760856 -57228078 + (CA)n Simple_repeat Simple_repeat 1 32 0 920 194 71 5 chr18 28760856 28760947 -57227987 + MER2 DNA MER2_type 98 210 -135 539 193 0 9 chr18 28760950 28761059 -57227875 - FLAM_A SINE Alu -1 141 34 386 224 13 0 chr18 28761077 28761153 -57227781 + MER2 DNA MER2_type 269 345 0 603 254 87 56 chr18 28761233 28761556 -57227378 - L1M4 LINE L1 -5869 673 341 312 262 73 43 chr18 28761873 28762037 -57226897 + L1MEd LINE L1 980 1148 -4971 2274 170 104 7 chr18 28762044 28762505 -57226429 + MER61D LTR ERV1 1 501 0 254 278 0 22 chr18 28762505 28762595 -57226339 + L1MEd LINE L1 1153 1240 -4879 27 0 0 0 chr18 28762652 28762679 -57226255 + AT_rich Low_complexity Low_complexity 1 27 0 21 57 0 0 chr18 28763786 28763821 -57225113 + AT_rich Low_complexity Low_complexity 1 35 0 561 164 67 0 chr18 28763824 28763928 -57225006 - MSTB1 LTR MaLR 0 432 322 1705 178 129 36 chr18 28763931 28764004 -57224930 - MSTB1 LTR MaLR -33 399 334 1812 107 12 4 chr18 28764004 28764256 -57224678 + AluSx SINE Alu 39 292 -20 1705 178 129 36 chr18 28764256 28764547 -57224387 - MSTB1 LTR MaLR -98 334 1 672 325 36 3 chr18 28764549 28764909 -57224025 + L1ME3A LINE L1 5585 5956 -214 1649 187 89 15 chr18 28765136 28765285 -57223649 + MSTB LTR MaLR 3 140 -286 1632 178 3 7 chr18 28765285 28765572 -57223362 - AluSx SINE Alu -26 286 1 1649 187 89 15 chr18 28765572 28765813 -57223121 + MSTB LTR MaLR 140 422 -4 798 312 103 18 chr18 28765817 28765957 -57222977 - L2 LINE L2 -1028 2286 2159 2238 192 69 0 chr18 28765957 28766394 -57222540 + MLT1C LTR MaLR 1 467 0 798 312 103 18 chr18 28766394 28766651 -57222283 - L2 LINE L2 -1155 2159 1855 315 0 0 0 chr18 28766666 28766701 -57222233 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1326 191 59 0 chr18 28766713 28766838 -57222096 - AluJb SINE Alu -57 255 139 189 0 0 0 chr18 28766838 28766859 -57222075 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1326 191 59 0 chr18 28766859 28766969 -57221965 - AluJb SINE Alu -173 139 6 595 318 87 7 chr18 28766982 28767268 -57221666 - L2 LINE L2 -1485 1829 1521 259 278 87 70 chr18 28767416 28767531 -57221403 - L2 LINE L2 -9 3304 3188 474 316 84 11 chr18 28767682 28767872 -57221062 - L2 LINE L2 -1946 1368 1165 535 143 11 0 chr18 28769226 28769317 -57219617 + MLT1A1 LTR MaLR 1 92 -273 2319 49 0 68 chr18 28769338 28769662 -57219272 + AluY SINE Alu 1 302 -9 25 0 0 0 chr18 28769838 28769863 -57219071 + AT_rich Low_complexity Low_complexity 1 25 0 308 233 0 14 chr18 28770010 28770083 -57218851 - MERVL LTR ERVL -2167 3318 3247 609 162 0 9 chr18 28770332 28770443 -57218491 + MSTA LTR MaLR 1 110 -318 1247 182 105 16 chr18 28770548 28770806 -57218128 + MSTA LTR MaLR 148 428 0 266 332 119 8 chr18 28770809 28771044 -57217890 - MERVL LTR ERVL -2690 2964 2704 272 224 60 60 chr18 28771936 28772052 -57216882 - LTR33A LTR ERVL -3 520 405 186 317 81 32 chr18 28772378 28772501 -57216433 + L2 LINE L2 2629 2757 -557 2390 50 0 10 chr18 28772966 28773263 -57215671 - AluY SINE Alu -17 294 1 210 365 60 65 chr18 28773485 28774052 -57214882 + L2 LINE L2 718 1281 -2033 479 374 0 10 chr18 28774085 28774288 -57214646 + L2 LINE L2 2094 2294 -1020 1418 91 5 25 chr18 28775969 28776200 -57212734 - AluSg/x SINE Alu 0 315 89 2418 127 3 3 chr18 28776765 28777120 -57211814 + THE1A LTR MaLR 1 355 0 224 222 0 0 chr18 28777946 28777991 -57210943 - L2 LINE L2 0 3313 3269 679 277 48 56 chr18 28778505 28778664 -57210270 + HAL1 LINE L1 1356 1515 -992 2237 55 0 39 chr18 28778664 28778972 -57209962 - AluY SINE Alu -15 296 1 679 277 48 56 chr18 28778972 28779187 -57209747 + HAL1 LINE L1 1515 1727 -780 243 0 0 0 chr18 28779258 28779285 -57209649 + (TA)n Simple_repeat Simple_repeat 2 28 0 279 231 13 13 chr18 28779914 28779992 -57208942 + MIR SINE MIR 184 261 -1 752 332 51 54 chr18 28780328 28780861 -57208073 + ERVL LTR ERVL 3665 4195 -1569 1021 234 111 30 chr18 28780882 28781215 -57207719 + MLT1A1 LTR MaLR 3 362 -3 647 344 59 14 chr18 28781263 28781731 -57207203 + ERVL LTR ERVL 4223 4770 -757 189 0 0 0 chr18 28781731 28781752 -57207182 + (TTG)n Simple_repeat Simple_repeat 1 21 0 647 344 59 14 chr18 28781752 28781786 -57207148 + ERVL LTR ERVL 4770 4801 -726 875 300 94 19 chr18 28781800 28782160 -57206774 + MLT1I LTR MaLR 11 397 -12 210 71 0 0 chr18 28782198 28782226 -57206708 + (GA)n Simple_repeat Simple_repeat 1 28 0 297 248 21 0 chr18 28782242 28782387 -57206547 + (TA)n Simple_repeat Simple_repeat 1 148 0 25 0 0 0 chr18 28782994 28783019 -57205915 + AT_rich Low_complexity Low_complexity 1 25 0 1452 189 0 59 chr18 28783371 28783678 -57205256 - AluJo SINE Alu -23 289 1 241 165 24 94 chr18 28783941 28784026 -57204908 + MLT1I-int LTR MaLR 1629 1707 -28 984 303 47 18 chr18 28784068 28784454 -57204480 + MLT1I LTR MaLR 13 409 0 881 313 92 57 chr18 28784455 28785285 -57203649 + ERVL LTR ERVL 4808 5666 -98 300 272 120 52 chr18 28785729 28785979 -57202955 + L1ME LINE L1 4060 4326 -1820 1195 240 91 26 chr18 28786114 28786463 -57202471 - MLT1D LTR MaLR 0 505 134 720 250 152 65 chr18 28786463 28786799 -57202135 + MLT1A1 LTR MaLR 1 365 0 437 263 53 0 chr18 28786799 28786913 -57202021 - MLT1D LTR MaLR -367 138 19 500 311 62 20 chr18 28787199 28787553 -57201381 + L1ME LINE L1 5419 5787 -375 353 248 44 51 chr18 28788278 28788415 -57200519 - MER69A DNA AcHobo -26 151 16 447 349 33 48 chr18 28788433 28788829 -57200105 + L1M4 LINE L1 4011 4400 -1746 1771 223 51 41 chr18 28789137 28789474 -57199460 - L1MB5 LINE L1 -47 6127 5782 240 35 0 0 chr18 28789474 28789503 -57199431 + (TG)n Simple_repeat Simple_repeat 2 30 0 1771 223 51 41 chr18 28789503 28789658 -57199276 - L1MB5 LINE L1 -392 5782 5630 23 68 0 0 chr18 28790115 28790159 -57198775 + AT_rich Low_complexity Low_complexity 1 44 0 602 75 0 0 chr18 28790197 28790277 -57198657 + MADE1 DNA Mariner 1 80 0 186 242 0 0 chr18 28790683 28790749 -57198185 + (TA)n Simple_repeat Simple_repeat 2 67 0 386 256 0 0 chr18 28790754 28790836 -57198098 - Tigger5 DNA MER2_type 0 2323 2242 307 286 0 0 chr18 28790826 28790903 -57198031 + Tigger5 DNA MER2_type 2242 2318 -5 * 25 51 0 0 chr18 28791051 28791090 -57197844 + AT_rich Low_complexity Low_complexity 1 39 0 1199 209 75 7 chr18 28791445 28791723 -57197211 + AluSg SINE Alu 2 298 -2 226 286 29 0 chr18 28791752 28791822 -57197112 + GA-rich Low_complexity Low_complexity 1 72 0 26 0 0 0 chr18 28792248 28792274 -57196660 + AT_rich Low_complexity Low_complexity 1 26 0 408 296 107 6 chr18 28794277 28794446 -57194488 + MIR SINE MIR 64 249 -13 294 125 0 0 chr18 28795011 28795059 -57193875 + (TTAAA)n Simple_repeat Simple_repeat 5 52 0 23 54 0 0 chr18 28795489 28795526 -57193408 + AT_rich Low_complexity Low_complexity 1 37 0 199 326 137 11 chr18 28795987 28796082 -57192852 + L2 LINE L2 2973 3079 -193 997 238 117 45 chr18 28796439 28796842 -57192092 + MLT1C LTR MaLR 8 439 -28 22 0 0 0 chr18 28797007 28797029 -57191905 + AT_rich Low_complexity Low_complexity 1 22 0 1945 104 20 34 chr18 28797129 28797427 -57191507 + AluSg SINE Alu 1 294 -16 25 51 0 0 chr18 28798776 28798815 -57190119 + AT_rich Low_complexity Low_complexity 1 39 0 340 279 125 0 chr18 28799113 28799217 -57189717 + L2 LINE L2 3197 3313 0 363 344 26 57 chr18 28799325 28799555 -57189379 - MIR SINE MIR 0 262 40 24 53 0 0 chr18 28799582 28799620 -57189314 + AT_rich Low_complexity Low_complexity 1 38 0 254 385 59 32 chr18 28800820 28801041 -57187893 + MIR SINE MIR 20 246 -16 338 252 78 43 chr18 28802640 28802755 -57186179 + L2 LINE L2 3188 3306 -7 209 289 0 0 chr18 28802813 28802858 -57186076 + L2 LINE L2 3220 3264 -8 5916 172 15 13 chr18 28803031 28804931 -57184003 - L1MA3 LINE L1 0 6305 4402 35 41 0 0 chr18 28805175 28805224 -57183710 + AT_rich Low_complexity Low_complexity 1 49 0 192 307 102 34 chr18 28805575 28805663 -57183271 + L2 LINE L2 3179 3272 0 2466 89 0 32 chr18 28805776 28806212 -57182722 - L1P4 LINE L1 -555 5613 5189 2453 88 21 0 chr18 28806211 28806572 -57182362 + L1PA10 LINE L1 5801 6168 0 * 2624 169 70 39 chr18 28807069 28807636 -57181298 + L1MB2 LINE L1 5587 6171 0 34 72 0 0 chr18 28807838 28807907 -57181027 + AT_rich Low_complexity Low_complexity 1 69 0 21 0 0 0 chr18 28808126 28808147 -57180787 + AT_rich Low_complexity Low_complexity 1 21 0 874 234 130 52 chr18 28808613 28808766 -57180168 - MLT2B1 LTR ERVL 0 414 274 1400 196 6 40 chr18 28808766 28809087 -57179847 + AluJo SINE Alu 3 312 0 874 234 130 52 chr18 28809087 28809317 -57179617 - MLT2B1 LTR ERVL -140 274 1 204 135 0 0 chr18 28809582 28809619 -57179315 + (TG)n Simple_repeat Simple_repeat 2 38 0 297 109 0 0 chr18 28812487 28812542 -57176392 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 1883 144 0 11 chr18 28812542 28812827 -57176107 - AluJb SINE Alu -30 282 1 306 192 39 10 chr18 28813596 28813700 -57175234 + (TA)n Simple_repeat Simple_repeat 1 107 0 320 326 87 15 chr18 28814037 28814233 -57174701 + L2 LINE L2 2718 2927 -387 274 277 76 34 chr18 28814397 28814516 -57174418 + L2 LINE L2 3165 3288 -25 26 64 0 0 chr18 28814653 28814700 -57174234 + AT_rich Low_complexity Low_complexity 1 47 0 399 350 62 31 chr18 28814960 28815249 -57173685 + L2 LINE L2 2565 2862 -452 319 329 50 96 chr18 28818085 28818365 -57170569 - L2 LINE L2 -1 3271 3005 32 26 0 0 chr18 28818521 28818560 -57170374 + AT_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr18 28818627 28818655 -57170279 + AT_rich Low_complexity Low_complexity 1 28 0 318 348 97 6 chr18 28818969 28819288 -57169646 - L1M4 LINE L1 -1940 4206 3859 1718 318 89 27 chr18 28819581 28820219 -57168715 + L2 LINE L2 89 811 -2503 2124 194 44 2 chr18 28820219 28820626 -57168308 - MSTB LTR MaLR -2 424 1 1718 318 89 27 chr18 28820626 28820974 -57167960 + L2 LINE L2 811 1136 -2178 859 319 18 36 chr18 28821130 28821465 -57167469 - LTR16A LTR ERVL -13 437 109 894 185 7 0 chr18 28821501 28821652 -57167282 - FRAM SINE Alu -24 152 1 2493 252 56 58 chr18 28821982 28822755 -57166179 + MER21B LTR ERV1 1 856 -75 1442 136 25 0 chr18 28822983 28823218 -57165716 + AluSg/x SINE Alu 70 310 0 508 380 31 10 chr18 28823335 28823689 -57165245 - HERV16 LTR ERVL -928 4557 4187 428 319 80 47 chr18 28823911 28824162 -57164772 - HERV16 LTR ERVL -1311 3685 3444 2085 122 7 0 chr18 28824162 28824450 -57164484 + AluSq SINE Alu 1 290 -23 207 69 0 0 chr18 28824453 28824482 -57164452 + (TAGA)n Simple_repeat Simple_repeat 3 31 0 428 319 80 47 chr18 28824482 28824678 -57164256 - HERV16 LTR ERVL -1553 3443 3219 436 348 16 11 chr18 28824835 28825022 -57163912 - HERV16 LTR ERVL -2374 3280 3093 1173 345 25 29 chr18 28825066 28825510 -57163424 - HERV16 LTR ERVL -1979 3017 2576 984 333 80 21 chr18 28825589 28826158 -57162776 - HERV16 LTR ERVL -2710 2286 1803 1845 214 45 87 chr18 28826159 28826325 -57162609 + MER92B LTR ERV1 1 172 -464 1626 186 39 33 chr18 28826325 28826686 -57162248 + MLT1A1 LTR MaLR 1 363 -2 1845 214 45 87 chr18 28826686 28827002 -57161932 + MER92B LTR ERV1 172 450 -186 2001 147 103 10 chr18 28827002 28827391 -57161543 - MSTA LTR MaLR -3 425 1 1845 214 45 87 chr18 28827391 28827571 -57161363 + MER92B LTR ERV1 450 636 0 1263 319 78 28 chr18 28828488 28829138 -57159796 - HERV16 LTR ERVL -4294 702 20 372 246 43 0 chr18 28829218 28829356 -57159578 + L1M4 LINE L1 2737 2880 -3266 728 200 0 0 chr18 28829356 28829486 -57159448 + FLAM_C SINE Alu 1 130 -13 21 0 0 0 chr18 28829487 28829508 -57159426 + AT_rich Low_complexity Low_complexity 1 21 0 247 192 51 13 chr18 28829513 28829591 -57159343 + L1M4 LINE L1 2861 2941 -3205 1081 146 0 6 chr18 28829789 28829998 -57158936 - AluJb SINE Alu 0 327 120 2918 189 12 28 chr18 28830152 28830692 -57158242 + L1MA7 LINE L1 4768 5306 -914 1636 152 48 31 chr18 28830692 28831045 -57157889 + L1MA8 LINE L1 5928 6288 -3 2918 189 12 28 chr18 28831045 28831213 -57157721 + L1MA7 LINE L1 5306 5475 -745 258 293 0 0 chr18 28831258 28831357 -57157577 + L1M4 LINE L1 4272 4370 -1776 1536 194 16 3 chr18 28831359 28831669 -57157265 + L1MA7 LINE L1 5474 5787 -504 11601 137 28 10 chr18 28831669 28832824 -57156110 + Tigger1 DNA MER2_type 1 1134 -1284 2408 48 0 16 chr18 28832824 28833133 -57155801 + AluY SINE Alu 1 304 -7 11601 137 28 10 chr18 28833133 28834340 -57154594 + Tigger1 DNA MER2_type 1134 2402 -16 2351 174 22 28 chr18 28834351 28834857 -57154077 + L1MA7 LINE L1 5786 6288 -3 1259 246 80 27 chr18 28834875 28835647 -57153287 + L1MC/D LINE L1 3338 4634 -1512 1232 250 22 58 chr18 28835640 28836446 -57152488 + L1MC/D LINE L1 4859 5629 -704 * 554 184 0 0 chr18 28836455 28836553 -57152381 + L1MC3 LINE L1 7681 7778 -7 2798 93 60 0 chr18 28836654 28837085 -57151849 + L1PA13 LINE L1 5703 6159 -4 279 114 0 0 chr18 28837233 28837277 -57151657 + (TG)n Simple_repeat Simple_repeat 2 45 0 234 254 0 17 chr18 28837481 28837540 -57151394 + L1P LINE L1 4906 4963 -1183 266 352 47 16 chr18 28838156 28838284 -57150650 + MER5B DNA MER1_type 1 132 -46 1525 141 21 96 chr18 28838301 28838635 -57150299 - MLT2A2 LTR ERVL -144 309 1 6500 113 10 3 chr18 28838635 28839883 -57149051 - HERVL-A2 LTR ERVL 0 5654 4332 * 10999 107 24 1 chr18 28839878 28841704 -57147230 - HERVL LTR ERVL -2603 3051 1091 21 0 0 0 chr18 28842071 28842092 -57146842 + AT_rich Low_complexity Low_complexity 1 21 0 25 75 0 0 chr18 28842656 28842709 -57146225 + AT_rich Low_complexity Low_complexity 1 53 0 1182 141 21 47 chr18 28843104 28843338 -57145596 + L1PA11 LINE L1 5944 6171 -3 4220 94 22 22 chr18 28844121 28844746 -57144188 + L1PA13 LINE L1 5519 6143 -20 281 323 21 10 chr18 28844893 28844989 -57143945 + MIR SINE MIR 3 99 -163 353 213 11 11 chr18 28845838 28845932 -57143002 + L1MEd LINE L1 25 118 -6001 464 242 117 0 chr18 28846253 28846373 -57142561 - MIR SINE MIR -4 258 125 26 50 0 0 chr18 28847490 28847530 -57141404 + AT_rich Low_complexity Low_complexity 1 40 0 21 57 0 0 chr18 28848155 28848190 -57140744 + AT_rich Low_complexity Low_complexity 1 35 0 2126 91 0 3 chr18 28848584 28848869 -57140065 - AluSg SINE Alu -10 300 17 211 258 0 30 chr18 28849776 28849842 -57139092 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 326 294 76 66 chr18 28850244 28850441 -57138493 + MIR SINE MIR 40 238 -24 189 308 39 0 chr18 28851572 28851650 -57137284 - L3b LINE CR1 -155 1428 1348 24 0 0 0 chr18 28851844 28851868 -57137066 + AT_rich Low_complexity Low_complexity 1 24 0 2427 59 0 3 chr18 28852372 28852675 -57136259 + AluY SINE Alu 1 302 -9 192 319 133 44 chr18 28853829 28853942 -57134992 - L2 LINE L2 -2 3270 3148 222 37 0 0 chr18 28854070 28854097 -57134837 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 363 102 0 0 chr18 28854099 28854148 -57134786 - AluJ/FRAM SINE Alu -21 281 233 408 226 29 44 chr18 28854481 28854618 -57134316 + MER103 DNA DNA 20 154 -12 240 343 116 38 chr18 28854731 28854802 -57134132 - L2 LINE L2 -585 2729 2665 1727 169 4 0 chr18 28854802 28855127 -57133807 + AluSx SINE Alu 9 334 0 240 343 116 38 chr18 28855127 28855526 -57133408 - L2 LINE L2 -649 2665 2220 22 70 0 0 chr18 28857217 28857260 -57131674 + AT_rich Low_complexity Low_complexity 1 43 0 2244 261 55 39 chr18 28857383 28857718 -57131216 - HsTC2 DNA Tc2 -1058 840 512 1981 182 101 21 chr18 28857718 28858146 -57130788 + MLT2C2 LTR ERVL 3 464 0 2244 261 55 39 chr18 28858146 28858636 -57130298 - HsTC2 DNA Tc2 -1386 512 2 439 368 51 33 chr18 28858838 28859227 -57129707 + HAL1 LINE L1 1247 1642 -865 1715 102 0 0 chr18 28859487 28859712 -57129222 - AluY SINE Alu -3 308 84 330 80 0 0 chr18 28860238 28860288 -57128646 + (CA)n Simple_repeat Simple_repeat 1 50 0 2051 159 0 9 chr18 28860341 28860675 -57128259 - MER7A DNA MER2_type 0 346 18 303 366 119 17 chr18 28862692 28862927 -57126007 + L1MC/D LINE L1 5574 5832 -1976 213 154 0 0 chr18 28864013 28864052 -57124882 + (TG)n Simple_repeat Simple_repeat 2 40 0 2119 107 13 7 chr18 28864968 28865276 -57123658 + AluSg SINE Alu 1 310 0 2130 89 6 49 chr18 28866119 28866443 -57122491 - AluSx SINE Alu -2 310 1 300 358 144 20 chr18 28866552 28867004 -57121930 + L2 LINE L2 2804 3311 -2 201 158 0 88 chr18 28867749 28867806 -57121128 + A-rich Low_complexity Low_complexity 5 56 0 22 56 0 0 chr18 28867814 28867850 -57121084 + AT_rich Low_complexity Low_complexity 1 36 0 2290 145 30 25 chr18 28868602 28869037 -57119897 - LTR23 LTR ERV1 0 437 1 606 214 89 18 chr18 28869161 28869329 -57119605 - L1MB8 LINE L1 -2 6176 5997 369 0 0 0 chr18 28869643 28869684 -57119250 + (TG)n Simple_repeat Simple_repeat 2 42 0 213 39 0 0 chr18 28869817 28869843 -57119091 + (TG)n Simple_repeat Simple_repeat 1 26 0 536 200 9 0 chr18 28869914 28870019 -57118915 + FLAM_A SINE Alu 1 106 -36 228 272 4 105 chr18 28870174 28870402 -57118532 - L1MEc LINE L1 -4460 1936 1732 1544 276 65 48 chr18 28870424 28872019 -57116915 - L1M4c LINE L1 -4453 2685 931 490 288 111 18 chr18 28872621 28872847 -57116087 - L1M4c LINE L1 -6601 258 12 21 0 0 0 chr18 28873293 28873314 -57115620 + AT_rich Low_complexity Low_complexity 1 21 0 820 295 119 43 chr18 28874694 28875131 -57113803 - L2 LINE L2 -6 3307 2838 * 1960 312 107 64 chr18 28875100 28876684 -57112250 - L2 LINE L2 -874 2440 789 352 221 32 0 chr18 28876928 28877023 -57111911 + L1MC4a LINE L1 5740 5837 -1971 186 43 0 0 chr18 28877053 28877076 -57111858 + (T)n Simple_repeat Simple_repeat 1 23 0 441 247 186 26 chr18 28877081 28877275 -57111659 - L2 LINE L2 -1829 1485 1261 213 39 0 0 chr18 28878111 28878137 -57110797 + (TG)n Simple_repeat Simple_repeat 2 27 0 349 358 77 46 chr18 28881773 28882100 -57106834 + L2 LINE L2 2916 3252 -20 22 56 0 0 chr18 28882619 28882655 -57106279 + AT_rich Low_complexity Low_complexity 1 36 0 1019 300 147 30 chr18 28883379 28884103 -57104831 + L2 LINE L2 2348 3166 -147 1359 279 39 2 chr18 28884145 28884578 -57104356 + L1 LINE L1 2343 2791 -4705 1702 224 28 31 chr18 28884608 28885183 -57103751 + L1 LINE L1 3027 3599 -3966 * 6345 183 17 39 chr18 28885170 28885191 -57103743 + L1 LINE L1 4907 4927 -2638 192 40 0 0 chr18 28885191 28885216 -57103718 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 6345 183 17 39 chr18 28885216 28886634 -57102300 + L1 LINE L1 4927 6314 -1251 680 196 98 12 chr18 28886630 28886793 -57102141 + L1MB3 LINE L1 5997 6173 -10 * 218 273 29 65 chr18 28886989 28887128 -57101806 - L2 LINE L2 -1366 1948 1815 248 391 8 0 chr18 28887974 28888107 -57100827 + L2 LINE L2 2606 2739 -575 219 218 0 36 chr18 28888421 28888476 -57100458 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 267 79 0 0 chr18 28888502 28888540 -57100394 + (TG)n Simple_repeat Simple_repeat 1 38 0 1918 123 32 0 chr18 28888685 28888969 -57099965 + AluSx SINE Alu 1 293 -19 440 376 37 62 chr18 28888970 28889489 -57099445 + L1MEc LINE L1 442 947 -5774 895 231 43 5 chr18 28889512 28889720 -57099214 - AluJo SINE Alu -10 302 87 1632 256 109 42 chr18 28889873 28890444 -57098490 - MLT1E2 LTR MaLR 0 626 18 330 168 56 0 chr18 28890604 28890711 -57098223 + (TA)n Simple_repeat Simple_repeat 1 113 0 515 333 55 11 chr18 28890711 28891287 -57097647 + L1MEc LINE L1 1281 1866 -4674 984 243 57 53 chr18 28891337 28891831 -57097103 + L1MEc LINE L1 3221 3716 -2824 572 227 87 15 chr18 28891882 28892146 -57096788 + L1MEc LINE L1 4615 4897 -1643 29 0 0 0 chr18 28892214 28892243 -57096691 + AT_rich Low_complexity Low_complexity 1 29 0 1817 139 0 11 chr18 28892251 28892560 -57096374 + AluSx SINE Alu 14 312 0 1655 231 79 18 chr18 28893665 28894120 -57094814 + MLT1D LTR MaLR 23 505 0 4929 206 62 13 chr18 28894191 28896084 -57092850 - L1PA11 LINE L1 -9 6165 4125 1709 154 69 50 chr18 28896229 28896593 -57092341 + THE1C LTR MaLR 5 375 0 6357 171 46 14 chr18 28896593 28897950 -57090984 + THE1C-int LTR MaLR 1 1605 -46 1665 157 70 39 chr18 28897959 28898316 -57090618 - LTR10A LTR ERV1 -61 548 181 392 245 240 0 chr18 28898329 28898533 -57090401 - LTR10A LTR ERV1 -356 253 1 11546 110 22 75 chr18 28898536 28902889 -57086045 - Harlequin LTR ERV1 -4 6645 704 793 236 82 121 chr18 28903027 28903748 -57085186 - Harlequin LTR ERV1 -5956 693 1 1606 186 186 26 chr18 28903757 28904219 -57084715 - LTR10A LTR ERV1 -61 548 13 1593 153 68 44 chr18 28904281 28904647 -57084287 + THE1C LTR MaLR 1 375 0 597 319 11 59 chr18 28905152 28905422 -57083512 + LTR16B LTR ERVL 1 257 -207 243 310 101 16 chr18 28906559 28906688 -57082246 - MIR SINE MIR -58 204 65 2289 80 3 7 chr18 28907181 28907483 -57081451 - AluY SINE Alu -10 301 1 2037 128 3 0 chr18 28907933 28908229 -57080705 - AluSx SINE Alu -2 310 14 637 299 79 45 chr18 28909149 28909671 -57079263 - L1ME3A LINE L1 -301 5869 5297 22 56 0 0 chr18 28910080 28910116 -57078818 + AT_rich Low_complexity Low_complexity 1 36 0 24 67 0 0 chr18 28910269 28910314 -57078620 + AT_rich Low_complexity Low_complexity 1 45 0 397 294 68 37 chr18 28910317 28910759 -57078175 + L1ME3A LINE L1 4536 4997 -1149 399 251 39 59 chr18 28911041 28911244 -57077690 + L1ME3A LINE L1 5753 5951 -219 24 53 0 0 chr18 28911476 28911514 -57077420 + AT_rich Low_complexity Low_complexity 1 38 0 232 47 0 78 chr18 28911623 28911687 -57077247 + (TTTA)n Simple_repeat Simple_repeat 4 62 0 2147 129 3 0 chr18 28912306 28912617 -57076317 - AluSx SINE Alu 0 312 1 30 59 0 0 chr18 28912769 28912820 -57076114 + AT_rich Low_complexity Low_complexity 1 51 0 25 0 0 0 chr18 28914666 28914691 -57074243 + AT_rich Low_complexity Low_complexity 1 25 0 5332 270 49 15 chr18 28914717 28916878 -57072056 + L1ME LINE L1 2110 4342 -1804 2194 119 0 7 chr18 28916905 28917215 -57071719 + AluSq SINE Alu 1 308 -5 274 279 135 44 chr18 28917226 28917545 -57071389 + L1ME LINE L1 5521 5868 -253 2080 139 0 0 chr18 28918395 28918690 -57070244 - AluSx SINE Alu -17 295 1 31 82 0 0 chr18 28918744 28918817 -57070117 + AT_rich Low_complexity Low_complexity 1 73 0 23 54 0 0 chr18 28920737 28920774 -57068160 + AT_rich Low_complexity Low_complexity 1 37 0 206 150 25 0 chr18 28921464 28921504 -57067430 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 2035 131 14 0 chr18 28921554 28921851 -57067083 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr18 28922588 28922609 -57066325 + AT_rich Low_complexity Low_complexity 1 21 0 264 301 53 30 chr18 28923687 28923820 -57065114 + MER5B DNA MER1_type 1 136 -42 1856 234 32 28 chr18 28923934 28924472 -57064462 - L1MB8 LINE L1 -14 6975 6436 629 238 91 4 chr18 28924439 28924670 -57064264 - L1MB8 LINE L1 -1555 5402 5152 * 1477 152 138 3 chr18 28924671 28924954 -57063980 + MER39B LTR ERV1 1 321 -332 990 227 88 78 chr18 28925004 28925378 -57063556 + MLT1B LTR MaLR 1 378 -12 897 254 50 88 chr18 28925390 28926037 -57062897 - L1MB8 LINE L1 -2535 4422 3801 537 16 0 0 chr18 28926201 28926263 -57062671 + (TG)n Simple_repeat Simple_repeat 2 63 0 2405 287 54 29 chr18 28926636 28927546 -57061388 - L1MB8 LINE L1 -5914 945 13 427 296 7 53 chr18 28927618 28927770 -57061164 - MER5B DNA MER1_type -30 148 4 35 24 0 0 chr18 28927978 28928020 -57060914 + AT_rich Low_complexity Low_complexity 1 42 0 275 179 0 13 chr18 28928894 28928972 -57059962 + CT-rich Low_complexity Low_complexity 1 77 0 2213 119 3 0 chr18 28929275 28929585 -57059349 + AluSp SINE Alu 3 313 0 26 0 0 0 chr18 28930167 28930193 -57058741 + AT_rich Low_complexity Low_complexity 1 26 0 368 202 39 39 chr18 28930603 28930707 -57058227 + MER21B LTR ERV1 3 106 -757 * 3600 211 48 33 chr18 28930705 28931526 -57057408 + MER21B LTR ERV1 19 851 -12 1597 145 123 33 chr18 28931801 28932133 -57056801 + THE1B LTR MaLR 1 362 -2 7288 121 16 41 chr18 28932135 28933311 -57055623 + THE1B-int LTR MaLR 1 1147 -433 691 107 0 9 chr18 28933314 28933426 -57055508 + THE1B-int LTR MaLR 1470 1580 0 1866 142 54 26 chr18 28933428 28933780 -57055154 + THE1B LTR MaLR 3 364 0 612 297 171 37 chr18 28934868 28935557 -57053377 - L2 LINE L2 0 3313 2532 366 94 0 0 chr18 28935557 28935610 -57053324 + MADE1 DNA Mariner 1 53 -27 828 81 37 19 chr18 28936142 28936303 -57052631 + GA-rich Low_complexity Low_complexity 4 167 0 2061 105 39 0 chr18 28938354 28938639 -57050295 - AluSc SINE Alu -13 296 1 299 327 65 0 chr18 28939146 28939253 -57049681 + MER34 LTR ERV1 1 114 -428 1231 135 10 121 chr18 28939275 28939564 -57049370 + LTR29 LTR ERV1 162 418 -204 4112 156 30 6 chr18 28939564 28940269 -57048665 + MER50 LTR ERV1 1 722 -12 1030 198 5 25 chr18 28940304 28940452 -57048482 + LTR29 LTR ERV1 415 559 -63 5884 75 2 9 chr18 28940452 28941237 -57047697 - LTR17 LTR ERV1 0 780 1 1030 198 5 25 chr18 28941237 28941290 -57047644 + LTR29 LTR ERV1 559 612 -10 3033 163 75 3 chr18 28941520 28942096 -57046838 - LTR62 LTR ERVK -98 621 5 1135 251 26 83 chr18 28942184 28942570 -57046364 - MER45R DNA AcHobo -1184 397 34 349 253 92 51 chr18 28942774 28943029 -57045905 - L1ME3A LINE L1 -318 5844 5567 299 313 102 31 chr18 28943631 28943954 -57044980 - L1MEd LINE L1 -4879 1240 895 350 115 0 0 chr18 28944073 28944134 -57044800 - MLT2B1 LTR ERVL 0 520 460 263 70 0 23 chr18 28944179 28944222 -57044712 + (TAGA)n Simple_repeat Simple_repeat 2 43 0 5103 187 50 53 chr18 28944267 28945557 -57043377 - L1M4c LINE L1 -5097 1287 2 33 80 0 0 chr18 28945557 28945632 -57043302 + AT_rich Low_complexity Low_complexity 1 75 0 2127 94 0 44 chr18 28945949 28946247 -57042687 - AluSg SINE Alu -13 297 13 413 323 36 36 chr18 28946519 28946714 -57042220 + L2 LINE L2 2559 2753 -561 21 36 0 0 chr18 28946824 28946852 -57042082 + AT_rich Low_complexity Low_complexity 1 28 0 401 311 34 0 chr18 28947231 28947350 -57041584 - L2 LINE L2 -1 3312 3190 2187 109 0 7 chr18 28948203 28948496 -57040438 - AluSg SINE Alu -19 291 1 1527 191 7 27 chr18 28949776 28950074 -57038860 - AluJo SINE Alu -20 292 1 4232 218 49 32 chr18 28950081 28951617 -57037317 - L1MD2 LINE L1 -10 6349 4781 983 223 54 9 chr18 28951621 28951845 -57037089 - MLT1A1 LTR MaLR -6 359 126 1178 275 141 9 chr18 28951866 28952434 -57036500 - L1MD2 LINE L1 -1361 4785 4143 38 22 0 0 chr18 28952566 28952611 -57036323 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr18 28953398 28953420 -57035514 + AT_rich Low_complexity Low_complexity 1 22 0 1940 100 16 22 chr18 28954052 28954363 -57034571 - AluSc SINE Alu 0 309 1 1418 232 0 9 chr18 28954371 28954686 -57034248 - AluJo SINE Alu 0 312 1 2242 95 3 22 chr18 28954801 28954938 -57033996 + AluY SINE Alu 1 139 -172 2048 89 3 34 chr18 28954938 28955265 -57033669 + AluY SINE Alu 1 318 0 2242 95 3 22 chr18 28955265 28955442 -57033492 + AluY SINE Alu 139 310 -1 450 252 72 55 chr18 28955443 28955804 -57033130 + L1MEc LINE L1 1110 1476 -4920 21 82 0 0 chr18 28956243 28956292 -57032642 + AT_rich Low_complexity Low_complexity 1 49 0 1863 153 94 24 chr18 28957918 28958258 -57030676 + THE1B LTR MaLR 1 364 0 1108 190 8 76 chr18 28958597 28958860 -57030074 - AluJo SINE Alu -67 245 1 1952 225 40 54 chr18 28959741 28960297 -57028637 - MER44D DNA MER2_type 0 605 3 643 302 131 39 chr18 28960768 28961202 -57027732 - MLT1J LTR MaLR -35 476 3 2050 203 63 24 chr18 28961653 28962111 -57026823 - LTR22 LTR ERVK -33 476 1 12176 101 4 2 chr18 28962111 28963790 -57025144 - HERVK22 LTR ERVK 0 6837 5156 10646 96 6 4 chr18 28963787 28965239 -57023695 - HERVK22 LTR ERVK -5382 1455 1 * 2154 189 61 26 chr18 28965240 28965731 -57023203 - LTR22 LTR ERVK -1 508 1 2001 135 7 0 chr18 28967016 28967312 -57021622 + AluSq SINE Alu 1 298 -15 266 259 165 0 chr18 28968226 28968311 -57020623 - MIR SINE MIR -162 100 2 396 0 0 0 chr18 28968975 28969019 -57019915 + (CA)n Simple_repeat Simple_repeat 2 45 0 1407 228 0 16 chr18 28969347 28969650 -57019284 - AluJo SINE Alu -14 298 1 260 261 68 80 chr18 28969684 28969933 -57019001 - HAL1 LINE L1 -15 2492 2247 528 292 91 18 chr18 28969980 28970254 -57018680 - HAL1 LINE L1 -2168 339 46 238 360 0 12 chr18 28970470 28970556 -57018378 + MIR SINE MIR 61 145 -63 2058 92 4 4 chr18 28970605 28970909 -57018025 + AluY SINE Alu 1 304 0 267 31 0 0 chr18 28971550 28971582 -57017352 + (TTA)n Simple_repeat Simple_repeat 2 33 0 801 263 11 5 chr18 28971808 28971994 -57016940 + MLT1E1 LTR MaLR 468 654 0 667 310 77 83 chr18 28972026 28972664 -57016270 + L1MEc LINE L1 1170 1803 -4593 475 315 61 55 chr18 28972671 28973017 -57015917 + L1MEc LINE L1 1866 2213 -4183 302 275 82 21 chr18 28973029 28973360 -57015574 + L1MEc LINE L1 2189 2539 -3676 271 290 28 19 chr18 28973509 28973616 -57015318 + L1MEc LINE L1 2785 2892 -3323 445 342 67 19 chr18 28973736 28974049 -57014885 + L1MEc LINE L1 3186 3513 -2702 33 0 0 0 chr18 28974254 28974287 -57014647 + AT_rich Low_complexity Low_complexity 1 33 0 1024 193 65 49 chr18 28975056 28975290 -57013644 + LTR48 LTR ERV1 121 326 -216 2192 102 0 0 chr18 28975290 28975601 -57013333 + AluSg SINE Alu 1 311 0 1024 193 65 49 chr18 28975601 28975822 -57013112 + LTR48 LTR ERV1 326 542 0 1777 245 146 38 chr18 28978012 28978754 -57010180 + L1MC3 LINE L1 6507 7328 -457 707 255 90 11 chr18 28978764 28979042 -57009892 + L1MD3 LINE L1 7690 7989 -6 23 54 0 0 chr18 28979350 28979387 -57009547 + AT_rich Low_complexity Low_complexity 1 37 0 240 35 0 0 chr18 28979764 28979793 -57009141 + (TG)n Simple_repeat Simple_repeat 1 29 0 1731 167 3 35 chr18 28980045 28980362 -57008572 - AluJb SINE Alu -5 307 1 1831 288 26 21 chr18 28980724 28981297 -57007637 + L2 LINE L2 2053 2628 -686 826 279 52 78 chr18 28981559 28981985 -57006949 + L2 LINE L2 2895 3309 -4 1614 161 55 68 chr18 28982914 28983294 -57005640 - THE1C LTR MaLR 0 375 1 306 217 108 12 chr18 28984993 28985076 -57003858 - L1MC4a LINE L1 -1852 5956 5866 382 244 47 53 chr18 28985126 28985309 -57003625 + MLT1H1 LTR MaLR 16 198 -369 23 33 0 0 chr18 28985614 28985644 -57003290 + AT_rich Low_complexity Low_complexity 1 30 0 21 71 0 0 chr18 28987279 28987321 -57001613 + AT_rich Low_complexity Low_complexity 1 42 0 1484 220 37 22 chr18 28987480 28987835 -57001099 - MLT1A2 LTR MaLR 0 374 15 30 0 0 0 chr18 28988859 28988889 -57000045 + AT_rich Low_complexity Low_complexity 1 30 0 234 275 54 27 chr18 28988935 28989084 -56999850 + L1ME LINE L1 5714 5866 -255 276 210 13 25 chr18 28989134 28989291 -56999643 + (TA)n Simple_repeat Simple_repeat 2 156 0 3308 254 101 43 chr18 28989393 28991130 -56997804 - Charlie2a DNA MER1_type -785 2077 240 7943 209 52 15 chr18 28993391 28994443 -56994491 + L1MC3 LINE L1 5734 6890 -895 2142 126 3 0 chr18 28994443 28994752 -56994182 - AluSx SINE Alu -2 310 1 7943 209 52 15 chr18 28994752 28995614 -56993320 + L1MC3 LINE L1 6890 7719 -66 23 54 0 0 chr18 28995620 28995657 -56993277 + AT_rich Low_complexity Low_complexity 1 37 0 207 328 44 28 chr18 28995953 28996133 -56992801 - L2 LINE L2 -1222 2092 1910 2371 124 3 19 chr18 28996551 28996921 -56992013 - THE1B LTR MaLR 0 364 1 223 343 137 0 chr18 28996921 28997096 -56991838 - MIR SINE MIR -8 254 56 266 380 100 37 chr18 28997178 28997805 -56991129 + L2 LINE L2 2375 3033 -239 1015 163 5 40 chr18 28997849 28998051 -56990883 - L1MC3 LINE L1 -290 7495 7301 21 0 0 0 chr18 28998619 28998640 -56990294 + AT_rich Low_complexity Low_complexity 1 21 0 2044 135 7 0 chr18 28999364 28999668 -56989266 - AluSx SINE Alu -4 308 3 380 253 32 52 chr18 29000363 29000517 -56988417 - MER5B DNA MER1_type -21 157 7 297 0 0 0 chr18 29000564 29000597 -56988337 + (TG)n Simple_repeat Simple_repeat 1 33 0 191 256 0 0 chr18 29000840 29000883 -56988051 - MER5A DNA MER1_type -138 51 9 462 309 12 24 chr18 29000951 29001119 -56987815 - MER5B DNA MER1_type -6 172 7 22 56 0 0 chr18 29001802 29001838 -56987096 + AT_rich Low_complexity Low_complexity 1 36 0 31 44 0 0 chr18 29002193 29002238 -56986696 + AT_rich Low_complexity Low_complexity 1 45 0 25 51 0 0 chr18 29002742 29002781 -56986153 + AT_rich Low_complexity Low_complexity 1 39 0 317 350 21 7 chr18 29003493 29003633 -56985301 + MER117 DNA MER1_type 25 166 -31 22 35 0 0 chr18 29003864 29003893 -56985041 + AT_rich Low_complexity Low_complexity 1 29 0 343 317 20 0 chr18 29004188 29004289 -56984645 + MIR SINE MIR 91 193 -69 330 26 0 0 chr18 29004410 29004449 -56984485 + (CAT)n Simple_repeat Simple_repeat 1 39 0 289 291 70 0 chr18 29004459 29004545 -56984389 - MIR SINE MIR -15 247 156 2148 74 0 74 chr18 29004739 29005075 -56983859 - AluY SINE Alu 0 311 1 1269 181 31 3 chr18 29005461 29005748 -56983186 + L1MA8 LINE L1 5997 6291 0 225 216 81 0 chr18 29007416 29007490 -56981444 + LTR68 LTR ERV1 1 80 -660 22 0 0 0 chr18 29007602 29007624 -56981310 + AT_rich Low_complexity Low_complexity 1 22 0 1961 125 0 4 chr18 29007637 29007947 -56980987 + AluSg SINE Alu 4 312 0 584 213 51 41 chr18 29008511 29008708 -56980226 + LTR37A LTR ERV1 219 417 -9 374 222 11 0 chr18 29008728 29008818 -56980116 - L1MD1 LINE L1 -140 6102 6012 1852 348 133 7 chr18 29008822 29009473 -56979461 - L1MA9 LINE L1 -30 6282 5632 2908 243 53 41 chr18 29009473 29011921 -56977013 - L1MD1 LINE L1 -175 6461 4042 1949 98 7 44 chr18 29011921 29012256 -56976678 - AluSq SINE Alu 0 324 1 2908 243 53 41 chr18 29012256 29012617 -56976317 - L1MD1 LINE L1 -2594 4042 3687 2145 147 44 5 chr18 29012617 29013005 -56975929 - MER57A LTR ERV1 0 403 1 2908 243 53 41 chr18 29013005 29013739 -56975195 - L1MD1 LINE L1 -2949 3687 16 5575 119 27 6 chr18 29014076 29014960 -56973974 - L1PA8A LINE L1 -895 5251 4349 6280 87 1 11 chr18 29014966 29015853 -56973081 + L1PA8A LINE L1 5254 6131 0 1287 194 33 10 chr18 29016445 29016744 -56972190 + L1MA10 LINE L1 6016 6321 -13 670 301 30 60 chr18 29018376 29018745 -56970189 + MER31-int LTR ERV1 3665 4022 -914 638 133 9 19 chr18 29068798 29068903 -56920031 - THE1B LTR MaLR -260 104 1 2184 157 59 10 chr18 29069009 29069417 -56919517 + MSTA LTR MaLR 1 428 0 1721 147 14 10 chr18 29069421 29069714 -56919220 + MSTA-int LTR MaLR 5 298 -1353 4734 215 15 11 chr18 29069714 29070667 -56918267 + MSTA-int LTR MaLR 440 1395 -256 266 241 11 0 chr18 29070879 29070966 -56917968 + (TA)n Simple_repeat Simple_repeat 2 89 0 26 0 0 0 chr18 29071601 29071627 -56917307 + AT_rich Low_complexity Low_complexity 1 26 0 273 309 57 95 chr18 29071684 29071946 -56916988 + L2 LINE L2 2128 2379 -935 291 54 0 0 chr18 29071956 29071993 -56916941 + (TCTA)n Simple_repeat Simple_repeat 4 40 0 232 300 40 30 chr18 29073044 29073144 -56915790 - Charlie7 DNA MER1_type -2042 570 470 2182 81 0 3 chr18 29073344 29073627 -56915307 - AluY SINE Alu -14 297 16 26 93 0 0 chr18 29074115 29074190 -56914744 + AT_rich Low_complexity Low_complexity 1 75 0 2008 132 0 16 chr18 29074524 29074827 -56914107 - AluSg SINE Alu -12 298 1 28 0 0 0 chr18 29075826 29075854 -56913080 + AT_rich Low_complexity Low_complexity 1 28 0 1002 137 11 34 chr18 29076191 29076366 -56912568 + THE1B LTR MaLR 194 364 0 5392 113 8 9 chr18 29076367 29077161 -56911773 + THE1B-int LTR MaLR 2 794 -786 3665 159 94 21 chr18 29077165 29077931 -56911003 - LTR12 LTR ERV1 0 826 5 5384 135 10 28 chr18 29078068 29078999 -56909935 + L1MA3 LINE L1 5392 6305 0 1628 238 19 11 chr18 29079093 29079455 -56909479 - MLT1A1 LTR MaLR 0 365 1 22 0 0 0 chr18 29079856 29079878 -56909056 + AT_rich Low_complexity Low_complexity 1 22 0 235 298 132 30 chr18 29079988 29080189 -56908745 + MIR SINE MIR 30 248 -14 189 0 0 0 chr18 29080404 29080425 -56908509 + (A)n Simple_repeat Simple_repeat 1 21 0 2704 268 48 23 chr18 29080431 29081493 -56907441 + L1M4 LINE L1 3520 4608 -1538 409 217 12 0 chr18 29081524 29081607 -56907327 + AluJ/FRAM SINE Alu 217 300 -2 2261 262 41 46 chr18 29082009 29082705 -56906229 + L1M1 LINE L1 2117 2817 -4748 1637 192 13 3 chr18 29082705 29083012 -56905922 + AluJb SINE Alu 1 310 -2 2261 262 41 46 chr18 29083012 29083699 -56905235 + L1M1 LINE L1 2817 3506 -4059 422 181 0 0 chr18 29083707 29083790 -56905144 + L1M1 LINE L1 4751 4833 -2732 1216 171 28 16 chr18 29083792 29084044 -56904890 - MER39 LTR ERV1 0 707 453 277 214 14 29 chr18 29084044 29084114 -56904820 + Tigger2 DNA MER2_type 1 69 -2649 * 2185 152 23 28 chr18 29084112 29084501 -56904433 + Tigger2 DNA MER2_type 2280 2666 -52 240 279 104 93 chr18 29084767 29084950 -56903984 + L2 LINE L2 3127 3311 -2 289 204 29 29 chr18 29085291 29085428 -56903506 + (TA)n Simple_repeat Simple_repeat 1 137 0 262 208 19 0 chr18 29086623 29086676 -56902258 + MLT1H1 LTR MaLR 2 55 -500 925 275 44 9 chr18 29086743 29087187 -56901747 + MLT1E2-int LTR MaLR 22 602 -769 556 331 6 0 chr18 29087391 29087560 -56901374 + MLT1E2-int LTR MaLR 691 860 -511 259 324 20 0 chr18 29087731 29087833 -56901101 + MLT1E2-int LTR MaLR 983 1086 -285 600 264 143 0 chr18 29087938 29088154 -56900780 - MLT1A2 LTR MaLR -127 247 1 250 167 93 0 chr18 29088157 29088211 -56900723 - MLT1C LTR MaLR -378 89 31 815 256 46 148 chr18 29088248 29088686 -56900248 + MLT1E2 LTR MaLR 113 626 0 384 65 65 0 chr18 29089045 29089107 -56899827 + MLT1H1 LTR MaLR 490 555 0 434 285 65 61 chr18 29089534 29089780 -56899154 + LTR40a LTR ERVL 192 438 -81 267 152 0 0 chr18 29089788 29089834 -56899100 + (TG)n Simple_repeat Simple_repeat 1 46 0 7885 187 34 13 chr18 29090303 29091674 -56897260 + L1 LINE L1 10 1778 -5787 204 40 0 0 chr18 29091674 29091699 -56897235 + (GA)n Simple_repeat Simple_repeat 2 26 0 7885 187 34 13 chr18 29091699 29092369 -56896565 + L1 LINE L1 1778 2433 -5132 7437 118 19 30 chr18 29092404 29092430 -56896504 + L1 LINE L1 2414 2439 -5126 1965 174 78 29 chr18 29092430 29092668 -56896266 - MSTA LTR MaLR 0 428 160 2213 82 14 7 chr18 29092668 29092959 -56895975 - AluY SINE Alu -18 293 1 1965 174 78 29 chr18 29092959 29093128 -56895806 - MSTA LTR MaLR -268 160 1 7437 118 19 30 chr18 29093128 29094562 -56894372 + L1 LINE L1 2439 3860 -3705 263 177 0 127 chr18 29094564 29094643 -56894291 - pTR5 LTR ERV1 -1562 876 808 5561 197 61 24 chr18 29094744 29096062 -56892872 + L1 LINE L1 5192 6558 -1007 689 303 77 23 chr18 29096181 29097204 -56891730 - L1MEc LINE L1 -3564 2818 1781 22 0 0 0 chr18 29097236 29097258 -56891676 + AT_rich Low_complexity Low_complexity 1 22 0 301 330 54 1 chr18 29097292 29097526 -56891408 - L1MEc LINE L1 -4790 1745 1342 34 65 0 0 chr18 29097526 29097588 -56891346 + AT_rich Low_complexity Low_complexity 1 62 0 23 33 0 0 chr18 29098615 29098645 -56890289 + AT_rich Low_complexity Low_complexity 1 30 0 5661 177 17 17 chr18 29099832 29100912 -56888022 + L1MC1 LINE L1 5254 6333 0 568 330 120 42 chr18 29100912 29101346 -56887588 - L2 LINE L2 -410 2904 2437 824 96 0 0 chr18 29101517 29101632 -56887302 - THE1A LTR MaLR -240 115 1 9940 218 121 12 chr18 29101633 29104975 -56883959 - L1P4 LINE L1 -399 7204 3486 4819 282 36 36 chr18 29105075 29106885 -56882049 - L1P4 LINE L1 -4704 2877 1068 1117 16 0 0 chr18 29107016 29107144 -56881790 + L1PA5 LINE L1 6019 6146 -8 28 86 0 0 chr18 29107385 29107455 -56881479 + AT_rich Low_complexity Low_complexity 1 70 0 226 357 36 0 chr18 29107573 29107657 -56881277 - MIR SINE MIR -96 166 80 53 73 0 0 chr18 29107756 29107865 -56881069 + AT_rich Low_complexity Low_complexity 1 109 0 5528 130 5 3 chr18 29107885 29109299 -56879635 - L1PA14 LINE L1 -4 6157 4739 2125 126 0 0 chr18 29109607 29109900 -56879034 - AluSc SINE Alu -8 301 9 2442 192 47 66 chr18 29109940 29110564 -56878370 + LTR9 LTR ERV1 1 612 0 375 320 136 39 chr18 29110874 29111162 -56877772 - L2 LINE L2 -4 3309 2984 655 317 63 23 chr18 29111162 29111604 -56877330 - LTR16B LTR ERVL -4 460 1 375 320 136 39 chr18 29111604 29111646 -56877288 - L2 LINE L2 -329 2984 2947 567 164 10 10 chr18 29111655 29111759 -56877175 + MLT1A1 LTR MaLR 1 104 -261 1167 186 68 20 chr18 29111761 29112013 -56876921 - MSTB LTR MaLR -2 424 161 420 315 93 6 chr18 29112243 29112405 -56876529 - LTR16B LTR ERVL -91 373 198 1247 158 77 4 chr18 29112408 29112642 -56876292 + MST-int LTR MaLR 1401 1651 0 5526 217 17 27 chr18 29112706 29114890 -56874044 + L1MA4 LINE L1 3609 5762 -538 545 186 0 156 chr18 29114889 29115120 -56873814 + L1MA4 LINE L1 6061 6255 -45 * 735 211 27 7 chr18 29115121 29115294 -56873640 + FRAM SINE Alu 1 176 0 1623 97 127 19 chr18 29115647 29115914 -56873020 + AluSg1 SINE Alu 2 297 -12 22 0 0 0 chr18 29116385 29116407 -56872527 + AT_rich Low_complexity Low_complexity 1 22 0 2423 152 67 20 chr18 29116772 29117232 -56871702 - L1PA15 LINE L1 -1 6164 5683 14878 227 14 16 chr18 29117368 29117785 -56871149 - L1PA15 LINE L1 -965 5181 4765 216 0 0 0 chr18 29117785 29117809 -56871125 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 14878 227 14 16 chr18 29117809 29121068 -56867866 - L1PA15 LINE L1 -1381 4765 1511 867 128 0 0 chr18 29121230 29121371 -56867563 + (GGAA)n Simple_repeat Simple_repeat 4 144 0 316 271 36 78 chr18 29121900 29122066 -56866868 - Charlie8 DNA MER1_type -2148 269 111 310 399 29 6 chr18 29122375 29122548 -56866386 + L1M3c LINE L1 958 1134 -5964 1803 262 50 25 chr18 29123259 29124198 -56864736 + L1M3c LINE L1 1546 2525 -4573 1205 205 0 0 chr18 29124204 29124409 -56864525 + AluJo SINE Alu 6 210 -102 2290 268 75 29 chr18 29124410 29124981 -56863953 + L1MA1 LINE L1 2591 3134 -4431 2232 112 0 10 chr18 29124981 29125294 -56863640 + AluSx SINE Alu 3 312 0 2290 268 75 29 chr18 29125294 29125510 -56863424 + L1MA1 LINE L1 3134 3339 -4226 1920 150 0 79 chr18 29125510 29125713 -56863221 + MER1B DNA MER1_type 1 165 -2545 2197 93 7 0 chr18 29125713 29126020 -56862914 - AluSg SINE Alu 0 309 1 1920 150 0 79 chr18 29126020 29126181 -56862753 + MER1B DNA MER1_type 165 337 0 2290 268 75 29 chr18 29126181 29127128 -56861806 + L1MA1 LINE L1 3339 4389 -3176 21 0 0 0 chr18 29128202 29128223 -56860711 + AT_rich Low_complexity Low_complexity 1 21 0 2387 88 0 3 chr18 29128752 29129060 -56859874 + AluSc SINE Alu 1 307 -2 26 0 0 0 chr18 29131303 29131329 -56857605 + AT_rich Low_complexity Low_complexity 1 26 0 3093 228 59 27 chr18 29131334 29132076 -56856858 + L1PA13 LINE L1 1 766 -6021 1776 110 11 4 chr18 29132178 29132441 -56856493 + THE1B-int LTR MaLR 1316 1580 0 1807 162 25 27 chr18 29132441 29132806 -56856128 + THE1B LTR MaLR 1 364 0 22 0 0 0 chr18 29133316 29133338 -56855596 + AT_rich Low_complexity Low_complexity 1 22 0 191 313 125 18 chr18 29133493 29133605 -56855329 + MIR SINE MIR 103 226 -36 2441 75 0 0 chr18 29134731 29135039 -56853895 - AluY SINE Alu -3 308 1 691 229 7 0 chr18 29136756 29136900 -56852034 + L1MA9 LINE L1 5652 5796 -375 388 80 21 80 chr18 29137000 29137188 -56851746 + (TATAA)n Simple_repeat Simple_repeat 1 177 0 27 29 0 0 chr18 29137189 29137223 -56851711 + AT_rich Low_complexity Low_complexity 1 34 0 445 104 52 40 chr18 29137223 29137396 -56851538 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 372 75 106 6 chr18 29137360 29137521 -56851413 + (TA)n Simple_repeat Simple_repeat 1 177 0 * 519 243 13 7 chr18 29137542 29137694 -56851240 + L1MA1 LINE L1 4766 4918 -2647 2274 193 37 16 chr18 29137784 29138292 -56850642 + L1MA9 LINE L1 5792 6310 -2 1967 104 7 0 chr18 29138566 29138845 -56850089 - AluY SINE Alu -30 281 1 237 33 0 0 chr18 29139351 29139381 -56849553 + (GA)n Simple_repeat Simple_repeat 1 30 0 2283 88 7 0 chr18 29140139 29140433 -56848501 - AluSc SINE Alu -13 296 1 22 70 0 0 chr18 29141303 29141346 -56847588 + AT_rich Low_complexity Low_complexity 1 43 0 646 321 37 23 chr18 29141560 29141778 -56847156 + MIR SINE MIR 32 252 -10 6819 158 24 7 chr18 29141813 29143975 -56844959 + L1MA1 LINE L1 5450 7721 0 971 229 14 9 chr18 29144039 29144257 -56844677 - MER58A DNA MER1_type -2 222 4 2009 144 35 32 chr18 29145195 29145543 -56843391 + THE1B LTR MaLR 1 349 -15 10018 116 55 2 chr18 29145543 29147044 -56841890 + THE1B-int LTR MaLR 1 1580 0 1986 131 6 29 chr18 29147044 29147358 -56841576 + THE1B LTR MaLR 1 307 -57 370 181 12 48 chr18 29147465 29147548 -56841386 + THE1B LTR MaLR 276 355 0 243 157 0 0 chr18 29147563 29147614 -56841320 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 213 132 0 0 chr18 29147618 29147656 -56841278 + (CA)n Simple_repeat Simple_repeat 1 38 0 32 0 0 0 chr18 29147811 29147843 -56841091 + AT_rich Low_complexity Low_complexity 1 32 0 401 306 96 15 chr18 29148452 29148682 -56840252 + MIR SINE MIR 8 252 -10 186 314 20 0 chr18 29149708 29149759 -56839175 - L2 LINE L2 -8 3305 3254 590 204 0 9 chr18 29149787 29149944 -56838990 + FLAM_A SINE Alu 4 159 0 21 71 0 0 chr18 29150123 29150165 -56838769 + AT_rich Low_complexity Low_complexity 1 42 0 2984 158 17 15 chr18 29150277 29150796 -56838138 - L1MC1 LINE L1 -18 6315 5796 915 222 106 94 chr18 29150801 29151313 -56837621 + MER66A LTR ERV1 97 469 -9 488 211 16 8 chr18 29151317 29151440 -56837494 - L1MC1 LINE L1 -549 5784 5661 635 184 61 37 chr18 29151507 29151670 -56837264 + LTR52 LTR ERVL 8 174 -247 3093 251 66 27 chr18 29151710 29152931 -56836003 + L1MC3 LINE L1 4997 5401 -745 2069 120 3 46 chr18 29153010 29153335 -56835599 - AluSq SINE Alu 0 313 3 242 211 35 0 chr18 29153337 29153394 -56835540 + L1M4 LINE L1 4849 4907 -1239 3779 254 38 57 chr18 29153526 29155688 -56833246 + L1P3 LINE L1 10 2157 -4304 290 57 0 38 chr18 29155686 29155739 -56833195 - L1PA8 LINE L1 0 6172 6122 * 874 157 0 0 chr18 29155739 29155886 -56833048 - L1P LINE L1 -1222 4924 4778 * 1764 120 4 8 chr18 29155864 29156131 -56832803 - L1P LINE L1 -1788 4358 4093 6214 109 6 0 chr18 29156132 29157224 -56831710 + L1PA8 LINE L1 5061 6157 -15 2827 119 0 37 chr18 29157225 29157688 -56831246 + L1PA15 LINE L1 5719 6164 -1 7280 195 29 17 chr18 29157693 29159377 -56829557 + L1 LINE L1 3225 4928 -1218 425 100 0 0 chr18 29159494 29159554 -56829380 - AluSp/q SINE Alu -94 219 160 1989 108 4 7 chr18 29159612 29159891 -56829043 + AluSc SINE Alu 17 294 -15 429 252 30 8 chr18 29160909 29161040 -56827894 + MER94 DNA DNA 1 134 0 304 311 46 33 chr18 29161534 29161685 -56827249 + MER5A DNA MER1_type 36 188 -1 813 181 0 18 chr18 29162068 29162234 -56826700 + L1MC3 LINE L1 6963 7125 -660 825 196 36 0 chr18 29162238 29162406 -56826528 + L1MC3 LINE L1 7505 7678 -107 2206 180 12 17 chr18 29162409 29163156 -56825778 - MER54B LTR ERVL -2 791 7 471 102 46 93 chr18 29163160 29163268 -56825666 + L1MC3 LINE L1 7675 7777 -8 3949 135 17 6 chr18 29163582 29164219 -56824715 + LTR9B LTR ERV1 1 644 0 26 64 0 0 chr18 29166086 29166133 -56822801 + AT_rich Low_complexity Low_complexity 1 47 0 3138 158 46 28 chr18 29166316 29167537 -56821397 + L1P5 LINE L1 499 1742 -4462 13126 198 53 16 chr18 29167540 29169227 -56819707 + L1P5 LINE L1 1931 3554 -2657 258 32 0 0 chr18 29169227 29169258 -56819676 + (CAA)n Simple_repeat Simple_repeat 3 33 0 13126 198 53 16 chr18 29169258 29170395 -56818539 + L1P5 LINE L1 3554 4931 -1280 403 143 13 13 chr18 29170395 29170472 -56818462 - MADE1 DNA Mariner -2 78 2 13126 198 53 16 chr18 29170472 29171274 -56817660 + L1P5 LINE L1 4931 5702 -509 265 257 111 23 chr18 29171697 29171868 -56817066 + L1MC5 LINE L1 7632 7817 -144 6576 64 28 0 chr18 29172036 29172899 -56816035 - L1PA7 LINE L1 -1 6153 5277 189 0 0 0 chr18 29172899 29172920 -56816014 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 6576 64 28 0 chr18 29172920 29173462 -56815472 - L1PA7 LINE L1 -877 5277 4752 227 73 49 0 chr18 29173642 29173683 -56815251 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 2177 109 3 7 chr18 29175069 29175372 -56813562 - AluSx SINE Alu -10 302 1 387 335 89 38 chr18 29175447 29175499 -56813435 - LTR16A LTR ERVL 0 450 402 1007 366 26 57 chr18 29175499 29175884 -56813050 - MLT1A2 LTR MaLR 0 374 2 387 335 89 38 chr18 29175884 29176067 -56812867 - LTR16A LTR ERVL -48 402 203 21 0 0 0 chr18 29176300 29176321 -56812613 + AT_rich Low_complexity Low_complexity 1 21 0 203 410 26 0 chr18 29176577 29176694 -56812240 - L2 LINE L2 -212 3060 2941 305 319 109 79 chr18 29179447 29179879 -56809055 + LTR16A LTR ERVL 1 445 -5 220 195 0 0 chr18 29180536 29180577 -56808357 + GA-rich Low_complexity Low_complexity 4 44 0 31 58 0 0 chr18 29180678 29180730 -56808204 + AT_rich Low_complexity Low_complexity 1 52 0 2824 179 35 23 chr18 29180813 29181417 -56807517 - L1MA8 LINE L1 -220 6071 5461 2078 123 0 3 chr18 29181422 29181715 -56807219 + AluSx SINE Alu 5 296 -16 22 103 0 0 chr18 29182079 29182157 -56806777 + AT_rich Low_complexity Low_complexity 1 78 0 22 35 0 0 chr18 29182173 29182202 -56806732 + AT_rich Low_complexity Low_complexity 1 29 0 547 249 123 59 chr18 29182554 29182975 -56805959 + LTR37B LTR ERV1 6 453 -15 787 273 29 13 chr18 29184091 29184329 -56804605 - L1PA12 LINE L1 -7339 242 1 326 328 86 30 chr18 29184334 29184636 -56804298 - L1M4 LINE L1 -3651 2495 2177 720 270 88 17 chr18 29184885 29185237 -56803697 + LTR37A LTR ERV1 39 415 -11 27 0 0 0 chr18 29185279 29185306 -56803628 + AT_rich Low_complexity Low_complexity 1 27 0 348 272 10 10 chr18 29185503 29185606 -56803328 + L1ME3A LINE L1 6059 6161 -9 863 165 34 139 chr18 29186084 29186259 -56802675 - Tigger2a DNA MER2_type -2275 443 304 1841 161 0 0 chr18 29186259 29186544 -56802390 - AluSx SINE Alu -27 285 1 863 165 34 139 chr18 29186544 29186635 -56802299 - Tigger2a DNA MER2_type -2414 304 205 2923 221 11 17 chr18 29186674 29187425 -56801509 - L1 LINE L1 -1884 4262 3517 * 4113 182 14 9 chr18 29187423 29189013 -56799921 + L1PA16 LINE L1 4461 6111 -20 293 64 0 0 chr18 29189028 29189075 -56799859 + L1PA14 LINE L1 6115 6161 0 * 767 198 183 20 chr18 29189074 29189276 -56799658 + L1PA16 LINE L1 5923 6157 -9 1116 171 0 46 chr18 29189370 29189586 -56799348 - Tigger2a DNA MER2_type -225 209 4 458 219 61 26 chr18 29190320 29190434 -56798500 + MIR SINE MIR 23 140 -122 274 182 0 61 chr18 29190538 29190604 -56798330 - MIR SINE MIR -115 147 86 471 35 0 0 chr18 29191991 29192048 -56796886 + (CA)n Simple_repeat Simple_repeat 2 58 0 26 30 0 0 chr18 29192347 29192380 -56796554 + AT_rich Low_complexity Low_complexity 1 33 0 365 277 97 7 chr18 29192382 29192537 -56796397 - MIR SINE MIR -2 260 92 22 70 0 0 chr18 29192546 29192589 -56796345 + AT_rich Low_complexity Low_complexity 1 43 0 333 68 0 0 chr18 29194098 29194142 -56794792 + (TATG)n Simple_repeat Simple_repeat 4 47 0 1492 204 118 6 chr18 29194637 29195000 -56793934 - MER39B LTR ERV1 -249 404 1 7539 199 46 44 chr18 29195000 29195418 -56793516 + L1MB1 LINE L1 3413 3829 -2339 266 226 0 0 chr18 29195418 29195471 -56793463 - MLT1A2 LTR MaLR -2 372 320 7539 199 46 44 chr18 29195471 29196680 -56792254 + L1MB1 LINE L1 3829 5088 -1080 1600 194 0 7 chr18 29196680 29196974 -56791960 + AluJb SINE Alu 10 301 -11 7539 199 46 44 chr18 29196974 29198050 -56790884 + L1MB1 LINE L1 5088 6161 -7 2309 107 0 0 chr18 29199430 29199739 -56789195 - AluSg SINE Alu -1 309 1 343 373 76 21 chr18 29199941 29200092 -56788842 + MIR SINE MIR 12 182 -80 2122 174 55 30 chr18 29200092 29200564 -56788370 + MER66B LTR ERV1 3 486 0 343 373 76 21 chr18 29200564 29200648 -56788286 + MIR SINE MIR 182 260 -2 199 284 37 92 chr18 29201747 29201856 -56787078 + MIR SINE MIR 66 144 -64 287 229 33 0 chr18 29202243 29202352 -56786582 - MIR SINE MIR -23 185 71 207 146 21 21 chr18 29203365 29203413 -56785521 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 222 366 67 57 chr18 29203428 29203830 -56785104 - L2 LINE L2 -343 2971 2566 264 304 146 35 chr18 29203876 29204047 -56784887 - L1ME LINE L1 -333 5788 5599 33 25 0 0 chr18 29204184 29204224 -56784710 + AT_rich Low_complexity Low_complexity 1 40 0 316 310 134 6 chr18 29204439 29204610 -56784324 + L2 LINE L2 3117 3309 -4 229 185 54 11 chr18 29206873 29206965 -56781969 + (TA)n Simple_repeat Simple_repeat 2 97 0 292 240 110 29 chr18 29207867 29208060 -56780874 - L1ME3A LINE L1 -15 6155 5950 1807 185 28 11 chr18 29208070 29208427 -56780507 - MLT1A1 LTR MaLR -2 363 1 1952 115 45 3 chr18 29208469 29208755 -56780179 + AluSg SINE Alu 1 298 -12 277 253 69 0 chr18 29208768 29208855 -56780079 - L1ME3A LINE L1 -243 5927 5835 207 0 0 0 chr18 29208858 29208881 -56780053 + (TA)n Simple_repeat Simple_repeat 2 24 0 725 257 62 17 chr18 29208888 29209304 -56779630 - L1M4 LINE L1 -2864 3282 2848 1536 216 8 35 chr18 29209415 29209786 -56779148 - L1MB8 LINE L1 -9 6169 5809 6264 161 2 4 chr18 29209786 29211692 -56777242 - L1PA13 LINE L1 -5 6158 4249 3632 147 33 36 chr18 29211692 29212391 -56776543 + L1PA13 LINE L1 3546 4242 -1904 2053 212 29 9 chr18 29212388 29212832 -56776102 - L1MB8 LINE L1 -358 5820 5368 * 363 279 52 65 chr18 29263023 29263177 -56725757 - MIR SINE MIR -83 179 28 2056 109 0 11 chr18 29263994 29264162 -56724772 - AluSx SINE Alu -11 301 136 2432 53 0 3 chr18 29264162 29264461 -56724473 - AluY SINE Alu -13 298 1 2056 109 0 11 chr18 29264461 29264576 -56724358 - AluSx SINE Alu -176 136 21 405 304 36 14 chr18 29265875 29266013 -56722921 - L2 LINE L2 0 3313 3173 991 169 5 42 chr18 29266092 29266305 -56722629 + L1M4 LINE L1 4787 4991 -1155 2145 191 22 31 chr18 29266307 29266720 -56722214 + MLT2B1 LTR ERVL 6 414 -106 2127 108 24 0 chr18 29266957 29267254 -56721680 - AluSp SINE Alu -9 304 1 243 88 0 0 chr18 29267337 29267371 -56721563 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2673 148 35 10 chr18 29267374 29267859 -56721075 - L1MB1 LINE L1 -12 6156 5660 365 82 0 0 chr18 29267859 29267908 -56721026 + L1P4 LINE L1 5420 5468 -695 371 291 119 62 chr18 29269510 29270022 -56718912 + L1ME LINE L1 352 892 -5178 268 214 43 0 chr18 29270080 29270150 -56718784 + MLT1E2 LTR MaLR 31 103 -523 625 250 22 33 chr18 29270256 29270436 -56718498 - MER45A DNA AcHobo 0 178 1 315 194 22 22 chr18 29271483 29271663 -56717271 + (TA)n Simple_repeat Simple_repeat 1 180 0 26 0 0 0 chr18 29271898 29271924 -56717010 + AT_rich Low_complexity Low_complexity 1 26 0 220 184 0 0 chr18 29272791 29272829 -56716105 - MIR SINE MIR -152 110 73 258 247 0 0 chr18 29273319 29273396 -56715538 + (TA)n Simple_repeat Simple_repeat 1 77 0 235 307 23 0 chr18 29273399 29273487 -56715447 + L1MC4 LINE L1 6614 6703 -1339 229 291 47 0 chr18 29273501 29273587 -56715347 + L1MC4 LINE L1 6614 6703 -1339 244 279 47 0 chr18 29273603 29273689 -56715245 + L1MC4 LINE L1 6614 6703 -1339 230 260 0 62 chr18 29273649 29273745 -56715189 - L1MC4 LINE L1 -1339 6703 6614 * 230 260 0 62 chr18 29273751 29273847 -56715087 - L1MC4 LINE L1 -1339 6703 6614 * 244 326 0 0 chr18 29273807 29273896 -56715038 + L1MC4 LINE L1 6614 6702 -1340 * 258 240 0 73 chr18 29273875 29273971 -56714963 - L1MC4 LINE L1 -1339 6703 6615 488 215 215 0 chr18 29274105 29274226 -56714708 - MLT1A1 LTR MaLR -216 149 3 255 343 40 32 chr18 29274253 29274501 -56714433 + HAL1 LINE L1 1792 2041 -466 532 165 31 0 chr18 29274524 29274621 -56714313 - MLT1C-int LTR MaLR -36 1335 1236 5056 230 26 33 chr18 29274700 29275624 -56713310 - MLT1C-int LTR MaLR -165 1206 290 1990 152 3 0 chr18 29275624 29275933 -56713001 - AluSx SINE Alu -2 310 1 5056 230 26 33 chr18 29275933 29276221 -56712713 - MLT1C-int LTR MaLR -1081 290 2 814 231 42 103 chr18 29276232 29276555 -56712379 - MLT1C LTR MaLR -10 380 101 2185 100 0 0 chr18 29276555 29276844 -56712090 - AluY SINE Alu -22 289 1 814 231 42 103 chr18 29276844 29276909 -56712025 - MLT1C LTR MaLR -289 101 34 387 127 0 0 chr18 29276913 29276976 -56711958 + (TG)n Simple_repeat Simple_repeat 2 64 0 23 54 0 0 chr18 29278669 29278706 -56710228 + AT_rich Low_complexity Low_complexity 1 37 0 879 232 4 84 chr18 29280095 29280332 -56708602 - MER58A DNA MER1_type -6 218 1 257 263 105 70 chr18 29280824 29280938 -56707996 - MLT1H LTR MaLR 0 549 432 312 333 111 0 chr18 29282410 29282554 -56706380 + MIR SINE MIR 103 262 0 185 234 0 21 chr18 29283758 29283805 -56705129 - L2 LINE L2 -1 3312 3267 554 298 40 49 chr18 29283937 29284263 -56704671 - L1ME1 LINE L1 -3 6163 5841 445 255 151 67 chr18 29284280 29284578 -56704356 - L1MEc LINE L1 -4465 2142 1820 301 268 64 64 chr18 29284637 29284794 -56704140 - L1MEc LINE L1 -4834 1592 1436 5152 143 32 11 chr18 29284891 29285864 -56703070 - L1PA16 LINE L1 0 6166 5175 1489 298 62 30 chr18 29286603 29287446 -56701488 - L1ME1 LINE L1 -4 6162 5293 718 274 134 25 chr18 29287564 29288013 -56700921 - L1ME1 LINE L1 -921 5225 4728 318 331 24 8 chr18 29289176 29289303 -56699631 + L2 LINE L2 3177 3305 -8 307 236 34 22 chr18 29289311 29289400 -56699534 + MIR SINE MIR 68 157 -105 253 182 146 0 chr18 29290304 29290359 -56698575 - Tigger4(Zombi) DNA MER2_type 0 2731 2669 418 266 100 30 chr18 29290359 29290660 -56698274 + HAL1b LINE L1 1017 1338 -10 546 291 21 8 chr18 29290793 29291027 -56697907 + L1MC3 LINE L1 5613 5849 -1959 321 321 25 25 chr18 29291070 29291232 -56697702 - MIR SINE MIR -13 249 88 270 0 0 0 chr18 29291653 29291683 -56697251 + (TG)n Simple_repeat Simple_repeat 2 31 0 2963 186 89 82 chr18 29292163 29292426 -56696508 + L1MC3 LINE L1 6831 7091 -694 254 167 37 19 chr18 29292426 29292480 -56696454 + MLT1F1 LTR MaLR 35 89 -478 2963 186 89 82 chr18 29292480 29293103 -56695831 + L1MC3 LINE L1 7091 7777 -8 287 229 49 0 chr18 29293116 29293238 -56695696 + (TA)n Simple_repeat Simple_repeat 2 129 0 647 254 46 20 chr18 29293844 29294041 -56694893 + MIR SINE MIR 2 203 -59 183 317 74 77 chr18 29294233 29294586 -56694348 - L2 LINE L2 -102 3170 2819 1235 133 5 5 chr18 29294662 29294850 -56694084 + AluSx SINE Alu 28 215 -97 4965 147 76 119 chr18 29294853 29296193 -56692741 - pTR5 LTR ERV1 0 2438 1157 7339 45 0 1 chr18 29297115 29298479 -56690455 + L1PA5 LINE L1 4786 6149 -5 1531 252 49 47 chr18 29300170 29301189 -56687745 - L1ME1 LINE L1 -239 5910 4884 359 288 66 66 chr18 29301405 29301648 -56687286 - L1ME1 LINE L1 -5042 1077 835 411 302 176 6 chr18 29301800 29301959 -56686975 + MER5A DNA MER1_type 4 189 0 43 20 0 0 chr18 29302493 29302543 -56686391 + AT_rich Low_complexity Low_complexity 1 50 0 237 333 0 0 chr18 29302760 29302838 -56686096 + T-rich Low_complexity Low_complexity 1 78 0 2395 89 0 6 chr18 29303507 29303820 -56685114 - AluY SINE Alu 0 311 1 1083 209 5 5 chr18 29304108 29304318 -56684616 + MER2 DNA MER2_type 1 210 -135 24 53 0 0 chr18 29304328 29304366 -56684568 + AT_rich Low_complexity Low_complexity 1 38 0 430 337 34 10 chr18 29304630 29304924 -56684010 + L1ME LINE L1 5515 5815 -306 22 56 0 0 chr18 29304994 29305030 -56683904 + AT_rich Low_complexity Low_complexity 1 36 0 243 286 95 24 chr18 29305457 29305625 -56683309 + MLT1J LTR MaLR 301 480 -31 2332 188 45 39 chr18 29305877 29306461 -56682473 - L1MD3 LINE L1 -14 7981 7395 304 263 11 11 chr18 29306476 29306571 -56682363 - MLT1F1 LTR MaLR -472 95 1 414 228 203 35 chr18 29306588 29306915 -56682019 - L1MD3 LINE L1 -730 7078 6743 336 309 24 24 chr18 29306943 29307069 -56681865 - L1MCb LINE L1 -1085 5856 5731 609 258 21 57 chr18 29307077 29307360 -56681574 - L1MCb LINE L1 -2131 4810 4538 57 66 0 0 chr18 29307362 29307468 -56681466 + AT_rich Low_complexity Low_complexity 1 106 0 2125 293 49 33 chr18 29307505 29308860 -56680074 - L1MCb LINE L1 -2660 4281 2937 803 215 21 11 chr18 29308861 29309052 -56679882 + LTR1 LTR ERV1 1 193 -592 15789 183 34 26 chr18 29309102 29312090 -56676844 + HUERS-P2 LTR ERV1 78 3088 0 1827 210 180 48 chr18 29312097 29312820 -56676114 + LTR1B LTR ERV1 9 826 0 355 235 181 7 chr18 29312836 29313113 -56675821 - L1MCb LINE L1 -4048 2893 2569 1752 140 9 36 chr18 29313160 29313696 -56675238 + MER4A LTR ERV1 5 664 0 318 226 94 94 chr18 29313757 29313991 -56674943 - L1M1 LINE L1 -4551 3014 2781 1498 201 11 3 chr18 29314002 29314285 -56674649 + MER49 LTR ERV1 1 285 -638 2785 166 39 80 chr18 29314371 29314733 -56674201 + MER4D LTR ERV1 238 560 -343 2305 80 17 0 chr18 29314733 29315032 -56673902 - AluY SINE Alu -7 304 1 2785 166 39 80 chr18 29315032 29315354 -56673580 + MER4D LTR ERV1 560 894 -9 909 269 71 39 chr18 29315359 29316171 -56672763 - L1MCb LINE L1 -4887 1536 1212 1855 215 35 52 chr18 29316255 29316775 -56672159 + MER67D LTR ERV1 1 511 -3 247 326 25 54 chr18 29316884 29317254 -56671680 - L1MCb LINE L1 -5741 681 246 677 291 110 12 chr18 29317307 29317644 -56671290 - LTR50 LTR ERVL -125 670 301 35 41 0 0 chr18 29317883 29317932 -56671002 + AT_rich Low_complexity Low_complexity 1 49 0 24 32 0 0 chr18 29319542 29319573 -56669361 + AT_rich Low_complexity Low_complexity 1 31 0 1503 183 49 7 chr18 29319780 29320065 -56668869 + AluJb SINE Alu 1 297 -15 2829 49 0 3 chr18 29321575 29321922 -56667012 - L1PA7 LINE L1 -12 6142 5797 632 189 8 0 chr18 29321925 29322057 -56666877 - L1 LINE L1 -2097 4049 3917 929 282 62 7 chr18 29322108 29322399 -56666535 + MLT1D LTR MaLR 5 311 -194 766 188 127 46 chr18 29322738 29322935 -56665999 + MLT1D LTR MaLR 293 505 0 744 307 168 6 chr18 29322936 29323275 -56665659 - L2 LINE L2 -2855 459 66 2261 96 3 0 chr18 29323933 29324235 -56664699 + AluSp SINE Alu 1 303 -10 36 0 0 0 chr18 29325654 29325690 -56663244 + AT_rich Low_complexity Low_complexity 1 36 0 805 147 49 14 chr18 29326083 29326226 -56662708 + THE1C LTR MaLR 1 148 -227 225 108 0 0 chr18 29326426 29326468 -56662466 + (CAGAGA)n Simple_repeat Simple_repeat 1 79 0 225 108 0 0 chr18 29326468 29326505 -56662429 + (CAGAGA)n Simple_repeat Simple_repeat 2 38 0 602 308 11 34 chr18 29326630 29326893 -56662041 + L1MC4 LINE L1 6652 6908 -1134 2584 246 85 14 chr18 29326899 29327703 -56661231 + L1MDb LINE L1 562 1422 -4987 210 373 93 0 chr18 29328722 29328840 -56660094 + MIR SINE MIR 48 176 -86 1536 156 59 47 chr18 29328943 29329282 -56659652 + MER61A LTR ERV1 1 343 0 2164 182 54 52 chr18 29329284 29329900 -56659034 + MER61A-int LTR ERV1 3 700 -4517 24663 98 42 19 chr18 29329926 29333703 -56655231 + MER61A-int LTR ERV1 1306 5217 0 1652 139 62 45 chr18 29333703 29334040 -56654894 + MER61A LTR ERV1 1 343 0 363 333 54 29 chr18 29334617 29334821 -56654113 + LTR33 LTR ERVL 304 512 -9 338 191 0 16 chr18 29334836 29334899 -56654035 - MLT1I LTR MaLR -2 407 346 196 354 50 20 chr18 29335507 29335606 -56653328 + MIR SINE MIR 20 121 -87 1919 181 118 41 chr18 29335814 29336322 -56652612 - LTR10B LTR ERV1 0 547 1 984 224 31 7 chr18 29336322 29336606 -56652328 - LTR10B-int LTR ERV1 0 6649 6254 * 1533 191 0 17 chr18 29336598 29336891 -56652043 - LTR10B-int LTR ERV1 -886 6899 6612 3671 237 29 0 chr18 29336929 29337689 -56651245 - LTR10B-int LTR ERV1 -1950 5835 5054 * 4135 205 5 32 chr18 29337686 29338809 -56650125 - LTR10B-int LTR ERV1 -3175 4112 2692 4711 242 17 6 chr18 29338864 29339877 -56649057 - LTR10B-int LTR ERV1 -5682 2103 1080 358 201 114 51 chr18 29339907 29340036 -56648898 - LTR10B-int LTR ERV1 -5928 721 495 * 1282 183 103 8 chr18 29340023 29340286 -56648648 - LTR10B-int LTR ERV1 -6357 292 5 1605 173 103 13 chr18 29340286 29340673 -56648261 - LTR10B LTR ERV1 0 547 126 553 149 65 52 chr18 29340834 29340988 -56647946 - LTR10B LTR ERV1 -391 156 1 264 361 50 0 chr18 29342405 29342524 -56646410 + L2 LINE L2 2225 2349 -965 397 313 50 62 chr18 29342548 29342788 -56646146 - L1ME3A LINE L1 -9 6161 5925 294 291 0 12 chr18 29342839 29342925 -56646009 + MLT2F LTR ERVL 53 137 -526 1392 268 41 9 chr18 29343542 29344101 -56644833 - L1M4 LINE L1 -1342 5302 4726 840 265 35 52 chr18 29344207 29344554 -56644380 - L1M4 LINE L1 -6186 356 16 357 359 93 24 chr18 29344751 29345161 -56643773 - L2 LINE L2 -1197 2117 1680 345 332 43 47 chr18 29346067 29346278 -56642656 + MIR SINE MIR 9 218 -44 999 198 9 26 chr18 29346684 29346916 -56642018 - L1MB8 LINE L1 -2 6176 5949 2493 65 0 0 chr18 29347849 29348157 -56640777 - AluY SINE Alu -3 308 1 192 275 50 50 chr18 29348649 29348729 -56640205 - MIR SINE MIR -71 191 112 263 299 28 28 chr18 29349020 29349127 -56639807 + MIR3 SINE MIR 92 198 -10 37 0 0 0 chr18 29349282 29349319 -56639615 + AT_rich Low_complexity Low_complexity 1 37 0 2177 112 0 7 chr18 29349607 29349911 -56639023 - AluSc SINE Alu -7 302 1 28 0 0 0 chr18 29350043 29350071 -56638863 + AT_rich Low_complexity Low_complexity 1 28 0 429 332 73 18 chr18 29350642 29350862 -56638072 + MIR SINE MIR 13 244 -18 264 336 52 9 chr18 29351094 29351210 -56637724 - L3 LINE CR1 -88 1489 1369 208 300 55 45 chr18 29351603 29351713 -56637221 - L3 LINE CR1 -588 989 879 23 68 0 0 chr18 29353293 29353337 -56635597 + AT_rich Low_complexity Low_complexity 1 44 0 1530 202 0 16 chr18 29353385 29353702 -56635232 - AluJb SINE Alu 0 312 1 371 299 26 62 chr18 29354481 29354675 -56634259 - MLT1J2 LTR MaLR -191 259 73 230 368 26 8 chr18 29358865 29358982 -56629952 - L2 LINE L2 -219 3053 2935 458 384 47 42 chr18 29359040 29359655 -56629279 - L2 LINE L2 -459 2855 2238 313 294 16 48 chr18 29360274 29360400 -56628534 + MIR SINE MIR 14 135 -127 184 243 43 57 chr18 29360836 29360906 -56628028 - MIR SINE MIR -124 138 70 3175 159 36 37 chr18 29360911 29361529 -56627405 - LTR29 LTR ERV1 -5 617 1 442 197 50 69 chr18 29361587 29361759 -56627175 - LTR26 LTR ERV1 -4 723 430 * 508 146 62 21 chr18 29361756 29361852 -56627082 - LTR8 LTR ERV1 -591 100 1 3245 164 22 9 chr18 29361883 29362464 -56626470 - LTR49 LTR ERV1 -6 589 1 9672 209 36 7 chr18 29362996 29364929 -56624005 + L1M1 LINE L1 17 2005 -5560 1016 89 83 0 chr18 29364929 29365086 -56623848 + MSTA LTR MaLR 2 171 -257 7311 184 32 23 chr18 29365106 29367338 -56621596 + L1M1 LINE L1 2647 4923 -2642 2420 56 7 3 chr18 29367338 29367642 -56621292 + AluY SINE Alu 4 308 -3 7311 184 32 23 chr18 29367642 29368219 -56620715 + L1M1 LINE L1 4923 5493 -2072 1056 299 77 63 chr18 29368317 29369134 -56619800 - L1MDb LINE L1 -5479 930 9 2287 259 28 11 chr18 29370530 29371238 -56617696 + L1M1 LINE L1 5861 6580 -985 3923 161 13 26 chr18 29371339 29372120 -56616814 + L1MC1 LINE L1 5561 6331 -2 2465 202 33 31 chr18 29372677 29373217 -56615717 - MER44D DNA MER2_type 0 605 10 494 319 46 14 chr18 29373533 29373749 -56615185 - MIR SINE MIR -14 248 26 2115 84 3 18 chr18 29374075 29374361 -56614573 - AluY SINE Alu -29 282 1 3320 224 177 11 chr18 29375250 29376149 -56612785 - THE1B-int LTR MaLR -601 1050 3 1856 152 93 3 chr18 29376163 29376486 -56612448 - THE1B LTR MaLR -12 352 1 714 296 120 3 chr18 29377790 29378074 -56610860 + L1MEc LINE L1 592 908 -5813 695 314 63 16 chr18 29378084 29378570 -56610364 + L1MEc LINE L1 1648 2205 -4441 1191 175 30 22 chr18 29378621 29378889 -56610045 - L1M2 LINE L1 -736 5576 5307 511 222 0 0 chr18 29378892 29379000 -56609934 - MLT1C LTR MaLR -209 258 151 942 234 67 39 chr18 29379000 29379359 -56609575 + L1ME1 LINE L1 5635 6003 -163 240 250 12 12 chr18 29379357 29379441 -56609493 + L1MA10 LINE L1 6232 6315 -19 * 22 0 0 0 chr18 29379530 29379552 -56609382 + AT_rich Low_complexity Low_complexity 1 22 0 223 233 12 23 chr18 29379612 29379698 -56609236 + T-rich Low_complexity Low_complexity 2 86 0 22 35 0 0 chr18 29379783 29379812 -56609122 + AT_rich Low_complexity Low_complexity 1 29 0 2481 167 41 10 chr18 29379838 29380328 -56608606 - L1MA8 LINE L1 -3 6288 5784 180 0 0 0 chr18 29380328 29380348 -56608586 + (TA)n Simple_repeat Simple_repeat 1 20 0 245 157 0 20 chr18 29380353 29380404 -56608530 + L1M1 LINE L1 5744 5793 -509 792 222 92 21 chr18 29380492 29380804 -56608130 - L1ME2 LINE L1 -163 6001 5665 195 167 0 0 chr18 29380838 29380880 -56608054 + (TA)n Simple_repeat Simple_repeat 2 43 0 1013 237 23 8 chr18 29380880 29381142 -56607792 - L1M2 LINE L1 -1111 5035 4770 2152 109 7 0 chr18 29381183 29381486 -56607448 - AluSp SINE Alu -8 305 1 23 54 0 0 chr18 29381683 29381720 -56607214 + AT_rich Low_complexity Low_complexity 1 37 0 21 71 0 0 chr18 29382170 29382212 -56606722 + AT_rich Low_complexity Low_complexity 1 42 0 243 225 169 34 chr18 29382455 29382544 -56606390 - L1MC4 LINE L1 -1191 6851 6751 228 135 0 0 chr18 29382637 29382674 -56606260 + (CATATA)n Simple_repeat Simple_repeat 6 42 0 200 243 0 27 chr18 29382682 29382756 -56606178 + (TA)n Simple_repeat Simple_repeat 2 73 0 1568 188 7 3 chr18 29382887 29383180 -56605754 - AluJb SINE Alu -15 297 4 482 328 38 0 chr18 29383180 29383418 -56605516 - L1MC4 LINE L1 -1913 5895 5649 560 97 68 0 chr18 29383425 29383695 -56605239 + (TA)n Simple_repeat Simple_repeat 1 288 0 495 310 53 9 chr18 29383742 29383968 -56604966 - L1MC4 LINE L1 -2210 5598 5363 368 235 20 3 chr18 29384387 29384521 -56604413 - L1MEc LINE L1 -3831 3137 3012 492 302 97 25 chr18 29384649 29385322 -56603612 - L1MEc LINE L1 -4305 2817 2097 377 277 40 0 chr18 29385590 29385738 -56603196 - L1MEc LINE L1 -4905 1518 1365 361 252 17 122 chr18 29386339 29386569 -56602365 - L1MEc LINE L1 -5855 1076 871 1994 132 14 0 chr18 29386684 29386965 -56601969 + AluSx SINE Alu 1 285 -27 23 54 0 0 chr18 29387869 29387906 -56601028 + AT_rich Low_complexity Low_complexity 1 37 0 24 32 0 0 chr18 29388504 29388535 -56600399 + AT_rich Low_complexity Low_complexity 1 31 0 220 363 25 0 chr18 29390552 29390632 -56598302 - MIR SINE MIR -140 122 41 24 32 0 0 chr18 29391344 29391375 -56597559 + AT_rich Low_complexity Low_complexity 1 31 0 185 0 0 39 chr18 29391482 29391508 -56597426 + (TTA)n Simple_repeat Simple_repeat 3 27 0 2046 144 33 28 chr18 29392034 29392396 -56596538 + THE1B LTR MaLR 1 364 0 659 324 74 18 chr18 29393601 29393780 -56595154 + L1MDa LINE L1 18 185 -6355 189 74 0 0 chr18 29393780 29393807 -56595127 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 659 324 74 18 chr18 29393807 29393963 -56594971 + L1MDa LINE L1 185 372 -6168 243 289 39 67 chr18 29394662 29394842 -56594092 + L1MDa LINE L1 1031 1205 -5338 * 1214 258 36 89 chr18 29394836 29395495 -56593439 + L1MDa LINE L1 1462 2082 -4458 2007 97 61 0 chr18 29395495 29395773 -56593161 + AluSq SINE Alu 3 297 -16 1214 258 36 89 chr18 29395773 29395830 -56593104 + L1MDa LINE L1 2082 2140 -4400 14280 240 25 11 chr18 29395856 29400628 -56588306 - L1PA15 LINE L1 -1 6815 1531 2183 105 0 29 chr18 29400628 29400941 -56587993 - AluSg SINE Alu -4 306 3 14280 240 25 11 chr18 29400941 29402494 -56586440 - L1PA15 LINE L1 -5285 1531 1 715 202 27 33 chr18 29402517 29402700 -56586234 - L1MB3 LINE L1 0 6183 6002 684 251 54 32 chr18 29402711 29402932 -56586002 - L1MEc LINE L1 -3361 2854 2624 1326 210 63 14 chr18 29402932 29403280 -56585654 - MLT1A1 LTR MaLR 0 365 1 684 251 54 32 chr18 29403280 29403337 -56585597 - L1MEc LINE L1 -3591 2624 2570 1085 144 74 82 chr18 29403340 29403583 -56585351 - MER67D LTR ERV1 -271 243 3 969 284 86 10 chr18 29403586 29403970 -56584964 - L1MEc LINE L1 -4300 2096 1684 1859 285 71 50 chr18 29403980 29405037 -56583897 - L1MEc LINE L1 -5245 1151 73 21 57 0 0 chr18 29405166 29405201 -56583733 + AT_rich Low_complexity Low_complexity 1 35 0 180 417 17 25 chr18 29407389 29407509 -56581425 + MIR SINE MIR 18 136 -126 458 279 28 60 chr18 29408216 29408431 -56580503 + L1ME LINE L1 477 684 -5846 313 276 33 99 chr18 29408455 29408727 -56580207 + L1ME LINE L1 822 1075 -5455 908 280 78 43 chr18 29408814 29409714 -56579220 + L1ME LINE L1 1304 2171 -4369 2541 40 0 3 chr18 29409714 29410013 -56578921 + AluY SINE Alu 1 298 -13 908 280 78 43 chr18 29410013 29410079 -56578855 + L1ME LINE L1 2171 3274 -3266 * 1180 241 62 28 chr18 29410075 29410507 -56578427 - L1M4 LINE L1 -3423 2723 2277 1699 245 73 50 chr18 29410537 29411182 -56577752 - L1ME1 LINE L1 -16 6219 5560 619 236 82 52 chr18 29411318 29411648 -56577286 - L1ME1 LINE L1 -849 5366 5027 449 246 36 42 chr18 29411644 29411811 -56577123 - L1ME1 LINE L1 -2297 3918 3753 * 246 261 0 0 chr18 29411812 29411923 -56577011 + CT-rich Low_complexity Low_complexity 2 112 0 524 291 120 17 chr18 29412743 29413035 -56575899 - L1ME1 LINE L1 -4667 1729 1408 34 65 0 0 chr18 29413468 29413530 -56575404 + AT_rich Low_complexity Low_complexity 1 62 0 1086 201 16 5 chr18 29414636 29414830 -56574104 - AluJo SINE Alu -115 197 2 712 192 8 0 chr18 29414845 29414975 -56573959 - FLAM_C SINE Alu -2 131 1 273 228 13 128 chr18 29415495 29415644 -56573290 + MIR SINE MIR 101 232 -30 278 222 32 0 chr18 29415669 29415795 -56573139 + (TA)n Simple_repeat Simple_repeat 2 131 0 328 309 123 6 chr18 29415945 29416107 -56572827 - MIR SINE MIR -19 243 63 22 88 0 0 chr18 29416814 29416871 -56572063 + AT_rich Low_complexity Low_complexity 1 57 0 1448 223 121 20 chr18 29417427 29417867 -56571067 + MLT1D LTR MaLR 22 505 0 327 164 0 0 chr18 29418002 29418063 -56570871 + (CTA)n Simple_repeat Simple_repeat 3 63 0 624 261 88 31 chr18 29418075 29418301 -56570633 - MIR SINE MIR -1 261 23 752 225 116 74 chr18 29418431 29418716 -56570218 - AluJo SINE Alu -5 297 1 3493 177 12 55 chr18 29418785 29419605 -56569329 + LTR1 LTR ERV1 1 785 0 8597 106 35 2 chr18 29419695 29420941 -56567993 + HSMAR1 DNA Mariner 1 1287 0 635 346 204 8 chr18 29421513 29422033 -56566901 - L2 LINE L2 -337 2977 2356 1006 172 62 101 chr18 29422050 29422154 -56566780 + AluJo SINE Alu 13 120 -192 1818 107 19 0 chr18 29422154 29422424 -56566510 + L1PA14 LINE L1 5878 6152 -9 1006 172 62 101 chr18 29422424 29422627 -56566307 + AluJo SINE Alu 120 308 -4 2199 75 0 3 chr18 29422630 29422967 -56565967 + AluY SINE Alu 1 336 0 22 0 0 0 chr18 29423021 29423043 -56565891 + AT_rich Low_complexity Low_complexity 1 22 0 280 365 28 0 chr18 29424707 29424814 -56564120 + MIR3 SINE MIR 99 208 0 21 57 0 0 chr18 29425129 29425164 -56563770 + AT_rich Low_complexity Low_complexity 1 35 0 435 68 0 0 chr18 29425653 29425712 -56563222 + (CA)n Simple_repeat Simple_repeat 2 60 0 475 241 24 52 chr18 29428170 29428382 -56560552 - L1MCc LINE L1 -5086 1337 1132 558 254 23 12 chr18 29428903 29429076 -56559858 - L1MCc LINE L1 -6179 244 70 391 342 107 39 chr18 29429701 29430263 -56558671 + L2 LINE L2 480 1079 -2235 250 279 54 47 chr18 29430467 29430596 -56558338 - MIR SINE MIR 0 262 133 396 325 63 21 chr18 29430675 29430866 -56558068 + L2 LINE L2 1508 1706 -1608 2478 270 66 5 chr18 29431016 29431365 -56557569 + L1MEc LINE L1 147 473 -5923 2051 93 3 48 chr18 29431365 29431677 -56557257 - AluSq SINE Alu -15 298 1 2478 270 66 5 chr18 29431677 29432104 -56556830 + L1MEc LINE L1 473 970 -5426 231 261 251 24 chr18 29432114 29432321 -56556613 + L1MEc LINE L1 1001 1254 -5142 726 143 130 17 chr18 29432381 29432763 -56556171 + L1P4 LINE L1 5128 5528 -637 180 215 28 140 chr18 29483421 29483528 -56505406 - MER5C DNA MER1_type -187 137 43 2017 106 33 10 chr18 29483723 29484025 -56504909 + AluSx SINE Alu 1 309 -3 245 29 0 29 chr18 29484040 29484075 -56504859 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 183 100 0 0 chr18 29484563 29484593 -56504341 + (TC)n Simple_repeat Simple_repeat 2 31 0 219 238 6 58 chr18 29485022 29485194 -56503740 + T-rich Low_complexity Low_complexity 5 167 0 391 209 19 0 chr18 29487313 29487418 -56501516 + CT-rich Low_complexity Low_complexity 3 109 0 1994 170 73 12 chr18 29487534 29487946 -56500988 + LTR1B LTR ERV1 390 826 0 4296 98 170 19 chr18 29489760 29490606 -56498328 + pTR5 LTR ERV1 1320 2438 0 223 254 30 15 chr18 29490608 29490675 -56498259 - MIR SINE MIR -109 153 86 2142 99 3 3 chr18 29490836 29491149 -56497785 + AluSq SINE Alu 1 313 0 1358 186 31 62 chr18 29491673 29491893 -56497041 + MLT1A2 LTR MaLR 1 205 -169 2271 103 3 6 chr18 29491893 29492204 -56496730 + AluSp SINE Alu 1 310 -3 1358 186 31 62 chr18 29492204 29492369 -56496565 + MLT1A2 LTR MaLR 205 374 0 346 323 122 0 chr18 29492555 29492719 -56496215 - MIR SINE MIR -4 258 75 1561 261 27 7 chr18 29493274 29493825 -56495109 + L1MC/D LINE L1 912 1473 -4953 4150 274 103 15 chr18 29493839 29495658 -56493276 + L1MC/D LINE L1 3605 5584 -842 910 227 6 16 chr18 29495773 29495995 -56492939 + L1MC/D LINE L1 5634 5861 -710 1322 243 68 6 chr18 29495996 29496317 -56492617 - MLT1A1 LTR MaLR -13 352 12 2529 254 36 20 chr18 29496328 29496963 -56491971 - MLT1A1-int LTR MaLR 0 1735 1091 1891 108 8 4 chr18 29497032 29497300 -56491634 - THE1B LTR MaLR 0 364 96 737 194 17 8 chr18 29497921 29498159 -56490775 + CT-rich Low_complexity Low_complexity 1 240 0 1424 158 81 40 chr18 29498187 29498484 -56490450 - AluSx SINE Alu -3 309 1 204 237 32 108 chr18 29498620 29498713 -56490221 - MER5C DNA MER1_type -237 87 2 288 0 0 0 chr18 29499252 29499284 -56489650 + (CA)n Simple_repeat Simple_repeat 1 32 0 768 248 84 4 chr18 29499330 29499572 -56489362 + L1MCc LINE L1 -358 240 -5781 582 192 80 40 chr18 29499610 29499761 -56489173 + MER50 LTR ERV1 10 166 -568 371 251 126 48 chr18 29499823 29500030 -56488904 + MER50 LTR ERV1 331 553 -181 1004 299 46 28 chr18 29500039 29500176 -56488758 + L1MCc LINE L1 280 413 -5608 1836 151 17 23 chr18 29500176 29500521 -56488413 - MER61A LTR ERV1 0 343 1 1004 299 46 28 chr18 29500521 29500844 -56488090 + L1MCc LINE L1 413 748 -5273 1584 159 82 6 chr18 29500925 29501440 -56487494 - MER51A LTR ERV1 -9 625 1 677 228 14 0 chr18 29501440 29501585 -56487349 + L1MCc LINE L1 806 952 -5069 700 239 122 40 chr18 29501732 29501979 -56486955 - MER92A LTR ERV1 -145 267 1 955 127 3 6 chr18 29502041 29502062 -56486872 + L1P4 LINE L1 5314 5334 -827 3866 129 5 26 chr18 29502062 29502714 -56486220 - L1PA13 LINE L1 -17 6146 5509 955 127 3 6 chr18 29502714 29502867 -56486067 + L1PA13 LINE L1 5334 5491 -670 21 0 0 0 chr18 29502918 29502939 -56485995 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 29503334 29503362 -56485572 + AT_rich Low_complexity Low_complexity 1 28 0 27 81 0 0 chr18 29503395 29503457 -56485477 + AT_rich Low_complexity Low_complexity 1 62 0 188 312 143 0 chr18 29504056 29504133 -56484801 - MIR SINE MIR -122 140 53 232 59 29 0 chr18 29504863 29504897 -56484037 + Alu SINE Alu 3 37 -264 316 89 13 51 chr18 29504943 29505022 -56483912 + (TA)n Simple_repeat Simple_repeat 2 77 0 309 233 70 12 chr18 29505051 29505223 -56483711 + MER20B DNA MER1_type 568 749 -34 1380 131 0 27 chr18 29505352 29505574 -56483360 + AluSp SINE Alu 87 302 -11 287 329 2 0 chr18 29505578 29505705 -56483229 + L1MCc LINE L1 1852 1952 -4588 1464 172 63 60 chr18 29505989 29506320 -56482614 - MER7A DNA MER2_type -15 331 2 1872 159 3 7 chr18 29509837 29510145 -56478789 - AluSq SINE Alu -6 307 1 194 114 0 45 chr18 29510159 29510203 -56478731 + (CAAAA)n Simple_repeat Simple_repeat 3 44 0 943 223 32 113 chr18 29511362 29511734 -56477200 - MLT1A1 LTR MaLR -21 344 3 738 213 69 6 chr18 29511737 29511911 -56477023 + MLT1A1 LTR MaLR 181 365 0 333 281 26 26 chr18 29512212 29512326 -56476608 - MLT1J LTR MaLR -396 115 2 261 0 0 0 chr18 29512776 29512805 -56476129 + (TTTTA)n Simple_repeat Simple_repeat 3 31 0 2879 80 53 0 chr18 29513139 29513550 -56475384 - L1PA10 LINE L1 0 6168 5736 345 292 45 58 chr18 29513559 29513850 -56475084 - L1ME LINE L1 -514 5607 5319 1478 213 82 0 chr18 29514506 29514825 -56474109 + MER2 DNA MER2_type 1 345 0 1918 124 78 0 chr18 29516909 29517192 -56471742 + AluSx SINE Alu 1 305 -7 516 275 28 24 chr18 29517219 29517430 -56471504 + L1MCc LINE L1 2939 3150 -3390 519 202 40 0 chr18 29517430 29517529 -56471405 - FRAM SINE Alu -16 160 58 401 36 36 0 chr18 29517678 29517733 -56471201 - THE1B LTR MaLR -307 57 1 4040 227 60 12 chr18 29517733 29518675 -56470259 - MLT1A1-int LTR MaLR -744 991 4 1640 222 28 14 chr18 29518676 29519036 -56469898 - MLT1A1 LTR MaLR 0 365 1 4727 224 42 55 chr18 29519036 29520616 -56468318 + L1MC3 LINE L1 5582 7056 -729 670 159 69 7 chr18 29520713 29520858 -56468076 + L1MB2 LINE L1 6015 6168 -3 1996 146 0 0 chr18 29520926 29521214 -56467720 - AluSx SINE Alu -24 288 1 185 94 31 0 chr18 29521599 29521631 -56467303 + CT-rich Low_complexity Low_complexity 2 34 0 1829 166 0 3 chr18 29522701 29522990 -56465944 + AluSx SINE Alu 1 288 -24 180 0 0 0 chr18 29522991 29523011 -56465923 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 34 24 0 0 chr18 29523202 29523243 -56465691 + AT_rich Low_complexity Low_complexity 1 41 0 447 68 0 0 chr18 29523669 29523728 -56465206 + (GA)n Simple_repeat Simple_repeat 2 60 0 1394 211 73 29 chr18 29523732 29524073 -56464861 - MLT1A1 LTR MaLR -7 358 3 303 28 0 0 chr18 29524117 29524153 -56464781 + (TA)n Simple_repeat Simple_repeat 1 36 0 1173 191 17 0 chr18 29524586 29524816 -56464118 + MLT2C2 LTR ERVL 2 235 -229 1921 163 113 0 chr18 29524832 29525212 -56463722 + MSTA LTR MaLR 4 426 -2 2742 177 12 4 chr18 29525214 29525711 -56463223 + MSTA-int LTR MaLR 1 501 -1150 1616 149 8 8 chr18 29525717 29525985 -56462949 + AluSx SINE Alu 6 273 -39 1995 83 28 177 chr18 29526133 29526601 -56462333 + MER48 LTR ERV1 1 398 0 333 309 53 27 chr18 29526601 29526778 -56462156 + HAL1 LINE L1 1752 1936 -571 279 236 34 11 chr18 29526983 29527072 -56461862 - MLT1E LTR MaLR -7 586 496 * 846 232 55 126 chr18 29527057 29527454 -56461480 - MLT1E LTR MaLR -223 370 2 22 0 0 0 chr18 29529468 29529490 -56459444 + AT_rich Low_complexity Low_complexity 1 22 0 938 246 80 16 chr18 29532209 29532679 -56456255 + MLT1F1 LTR MaLR 1 547 -20 1690 191 7 0 chr18 29532695 29532998 -56455936 + MER7A DNA MER2_type 1 303 -43 359 314 14 0 chr18 29533263 29533403 -56455531 - L1MEc LINE L1 -4576 1982 1818 3722 167 27 24 chr18 29533842 29534547 -56454387 + MSTA-int LTR MaLR 874 1580 0 1085 212 107 14 chr18 29534547 29534899 -56454035 + MSTA LTR MaLR 1 375 0 2417 258 41 39 chr18 29535529 29536400 -56452534 - L1MC3 LINE L1 -723 7062 6190 24 0 0 0 chr18 29536622 29536646 -56452288 + AT_rich Low_complexity Low_complexity 1 24 0 44 80 0 0 chr18 29536658 29536758 -56452176 + AT_rich Low_complexity Low_complexity 1 100 0 25 83 0 0 chr18 29537054 29537114 -56451820 + AT_rich Low_complexity Low_complexity 1 60 0 324 111 0 0 chr18 29537118 29537172 -56451762 - L1MB4 LINE L1 -1 6179 6126 5886 181 23 30 chr18 29537184 29539558 -56449376 - L1MA4A LINE L1 -5 7000 4638 3120 172 8 74 chr18 29539557 29540530 -56448404 - L1MA4A LINE L1 -3598 3250 2355 * 9222 230 43 5 chr18 29540523 29542488 -56446446 - L1MA4A LINE L1 -4809 2040 2 350 59 98 0 chr18 29542487 29542538 -56446396 - L1MB3 LINE L1 -40 6143 6088 * 216 0 0 0 chr18 29542720 29542744 -56446190 + (TA)n Simple_repeat Simple_repeat 1 24 0 333 196 39 45 chr18 29542846 29543025 -56445909 + (GGGTG)n Simple_repeat Simple_repeat 3 180 0 2013 81 0 12 chr18 29543150 29543409 -56445525 - AluY SINE Alu -12 299 44 28 0 0 0 chr18 29543412 29543440 -56445494 + AT_rich Low_complexity Low_complexity 1 28 0 252 200 0 0 chr18 29544618 29544673 -56444261 + (TA)n Simple_repeat Simple_repeat 1 55 0 321 228 0 13 chr18 29544829 29544908 -56444026 + AluJ/FRAM SINE Alu 217 294 -8 542 283 110 0 chr18 29545211 29545402 -56443532 - MIR SINE MIR -4 258 47 28 0 0 0 chr18 29545582 29545610 -56443324 + AT_rich Low_complexity Low_complexity 1 28 0 257 307 15 0 chr18 29545636 29545773 -56443161 + (TA)n Simple_repeat Simple_repeat 1 139 0 23 33 0 0 chr18 29546727 29546757 -56442177 + AT_rich Low_complexity Low_complexity 1 30 0 2096 105 23 10 chr18 29547844 29548150 -56440784 - AluSg SINE Alu 0 310 1 210 37 0 0 chr18 29548239 29548266 -56440668 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 523 261 80 17 chr18 29548451 29548627 -56440307 - MIR SINE MIR 0 262 76 2781 10 0 0 chr18 29548807 29549118 -56439816 + AluYa5 SINE Alu 1 311 0 270 0 0 0 chr18 29549934 29549964 -56438970 + (CA)n Simple_repeat Simple_repeat 2 31 0 1731 218 8 3 chr18 29549968 29550349 -56438585 + L1MB3 LINE L1 5799 6181 -2 29 28 0 0 chr18 29550700 29550736 -56438198 + AT_rich Low_complexity Low_complexity 1 36 0 424 339 64 17 chr18 29550928 29551161 -56437773 + MIR SINE MIR 18 261 -1 1483 183 55 14 chr18 29553323 29553612 -56435322 + AluJb SINE Alu 1 301 -11 2288 114 0 0 chr18 29554027 29554335 -56434599 - AluSc SINE Alu -1 308 1 56 0 0 0 chr18 29554687 29554743 -56434191 + AT_rich Low_complexity Low_complexity 1 56 0 265 281 37 0 chr18 29555893 29555975 -56432959 - MIR SINE MIR -73 189 105 312 70 0 0 chr18 29556161 29556204 -56432730 + (CA)n Simple_repeat Simple_repeat 2 44 0 3304 177 70 25 chr18 29556413 29556889 -56432045 - L1MA7 LINE L1 0 6291 5771 285 75 0 0 chr18 29556889 29556929 -56432005 + (TA)n Simple_repeat Simple_repeat 1 40 0 3304 177 70 25 chr18 29556929 29557168 -56431766 - L1MA7 LINE L1 -520 5771 5544 2180 208 8 28 chr18 29557167 29557668 -56431266 + L1 LINE L1 4662 5152 -994 * 33 43 0 0 chr18 29557757 29557804 -56431130 + AT_rich Low_complexity Low_complexity 1 47 0 592 250 78 39 chr18 29557874 29558206 -56430728 + LTR37A LTR ERV1 82 426 0 541 324 54 12 chr18 29558410 29558651 -56430283 + HAL1 LINE L1 4 254 -2253 681 105 0 0 chr18 29558744 29558839 -56430095 - AluS SINE Alu -217 95 1 2718 207 29 13 chr18 29558982 29559601 -56429333 + L1MB7 LINE L1 4773 5401 -745 1312 214 97 103 chr18 29559601 29560303 -56428631 + LTR1B LTR ERV1 1 698 -128 1378 258 37 6 chr18 29560307 29560791 -56428143 - L1 LINE L1 -2943 3203 2705 204 158 0 0 chr18 29560963 29561001 -56427933 + (TATATG)n Simple_repeat Simple_repeat 2 39 0 1323 225 23 6 chr18 29561004 29561346 -56427588 + L1MB7 LINE L1 5837 6184 0 22 56 0 0 chr18 29561373 29561409 -56427525 + AT_rich Low_complexity Low_complexity 1 36 0 219 375 10 0 chr18 29561998 29562094 -56426840 - MIR3 SINE MIR -19 189 93 21 0 0 0 chr18 29562332 29562353 -56426581 + AT_rich Low_complexity Low_complexity 1 21 0 1820 142 10 7 chr18 29563449 29563758 -56425176 + AluSg SINE Alu 1 310 0 2112 122 30 28 chr18 29563774 29564136 -56424798 - THE1B LTR MaLR 0 364 2 899 206 0 10 chr18 29564236 29564440 -56424494 - L1 LINE L1 -3014 3834 3633 348 273 127 9 chr18 29564583 29564693 -56424241 - L1MDb LINE L1 -5647 762 640 336 193 26 9 chr18 29564719 29564833 -56424101 - L1PA6 LINE L1 -23 6131 6016 * 9566 226 27 31 chr18 29564829 29567412 -56421522 - L1 LINE L1 -4041 2808 119 420 215 43 102 chr18 29567512 29567768 -56421166 + LTR28 LTR ERV1 780 1020 0 250 123 35 0 chr18 29567964 29568021 -56420913 + (TA)n Simple_repeat Simple_repeat 2 60 0 1576 215 68 8 chr18 29568028 29568428 -56420506 + L1MC3 LINE L1 7360 7783 -2 2292 96 3 3 chr18 29568561 29568864 -56420070 + AluSx SINE Alu 1 303 -9 31 44 0 0 chr18 29569237 29569282 -56419652 + AT_rich Low_complexity Low_complexity 1 45 0 543 274 55 20 chr18 29569490 29569691 -56419243 + L1MA9 LINE L1 6059 6266 -46 1401 186 80 43 chr18 29569970 29570346 -56418588 - MLT1B LTR MaLR 0 390 1 1291 256 92 34 chr18 29570661 29570967 -56417967 - MLT1E1 LTR MaLR -4 650 363 1899 101 7 42 chr18 29570967 29571253 -56417681 + AluSx SINE Alu 1 276 -36 342 0 0 0 chr18 29571259 29571297 -56417637 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1291 256 92 34 chr18 29571297 29571553 -56417381 - MLT1E1 LTR MaLR -295 359 1 1812 127 31 21 chr18 29573165 29573456 -56415478 - AluSx SINE Alu 0 312 19 21 0 0 0 chr18 29574000 29574021 -56414913 + AT_rich Low_complexity Low_complexity 1 21 0 226 132 0 0 chr18 29574181 29574219 -56414715 - L1MD3 LINE L1 -2042 5953 5916 1022 190 116 64 chr18 29575486 29575813 -56413121 - MER2 DNA MER2_type 0 344 1 277 394 55 0 chr18 29575861 29576026 -56412908 - MIR3 SINE MIR 0 208 35 375 312 164 11 chr18 29576047 29576316 -56412618 + L2 LINE L2 2155 2464 -850 203 282 127 70 chr18 29576481 29576623 -56412311 + L2 LINE L2 2897 3046 -226 21 0 0 0 chr18 29576665 29576686 -56412248 + AT_rich Low_complexity Low_complexity 1 21 0 387 41 0 0 chr18 29576686 29576735 -56412199 + (CA)n Simple_repeat Simple_repeat 2 50 0 1476 190 26 0 chr18 29576736 29577004 -56411930 - AluJo SINE Alu -37 275 1 256 343 22 44 chr18 29577056 29577193 -56411741 + L2 LINE L2 3176 3309 -4 2594 42 3 3 chr18 29577345 29577655 -56411279 - AluY SINE Alu -1 310 1 22 56 0 0 chr18 29577869 29577905 -56411029 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr18 29578020 29578042 -56410892 + AT_rich Low_complexity Low_complexity 1 22 0 246 235 10 31 chr18 29578055 29578153 -56410781 + L1ME LINE L1 3864 3959 -2187 480 289 64 20 chr18 29578176 29578474 -56410460 - L1M4 LINE L1 -2516 3630 3320 1012 267 67 44 chr18 29578504 29579136 -56409798 + L1ME LINE L1 5027 5667 -497 756 257 36 51 chr18 29579371 29579958 -56408976 + L1M4 LINE L1 2778 4989 -1157 1121 281 127 29 chr18 29579967 29580542 -56408392 + L1MD2 LINE L1 335 897 -5512 2289 247 124 21 chr18 29580543 29581672 -56407262 + L1MD2 LINE L1 1083 2452 -3954 396 275 52 36 chr18 29581745 29581996 -56406938 + L1MD2 LINE L1 3588 3842 -2564 473 189 182 50 chr18 29581999 29582158 -56406776 - L1MD2 LINE L1 -52 6307 6128 3145 256 74 30 chr18 29582199 29583498 -56405436 + L1MD2 LINE L1 3852 5207 -1199 2513 231 78 10 chr18 29583580 29584119 -56404815 + L1MD2 LINE L1 5842 6443 -176 189 0 0 0 chr18 29584119 29584140 -56404794 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2513 231 78 10 chr18 29584140 29584313 -56404621 + L1MD2 LINE L1 6443 6603 -16 195 100 0 0 chr18 29584342 29584372 -56404562 + (A)n Simple_repeat Simple_repeat 1 30 0 681 229 65 9 chr18 29584376 29584590 -56404344 + L1MC/D LINE L1 4472 4697 -1449 1493 226 63 22 chr18 29584614 29585202 -56403732 + L1MC/D LINE L1 4833 5446 -743 327 276 9 9 chr18 29585659 29585775 -56403159 + (TA)n Simple_repeat Simple_repeat 1 116 0 25 31 0 0 chr18 29585874 29585906 -56403028 + AT_rich Low_complexity Low_complexity 1 32 0 1753 207 44 65 chr18 29586492 29587058 -56401876 + MLT2B3 LTR ERVL 1 554 0 31 0 0 0 chr18 29587330 29587361 -56401573 + AT_rich Low_complexity Low_complexity 1 31 0 344 304 6 8 chr18 29588287 29588435 -56400499 - L1MDb LINE L1 -4573 1754 1308 364 231 86 97 chr18 29588591 29588777 -56400157 + L1ME LINE L1 904 1087 -5118 271 295 28 56 chr18 29588843 29589202 -56399732 + L1ME LINE L1 1253 1601 -4795 298 300 12 0 chr18 29589352 29589432 -56399502 + MLT1G1 LTR MaLR 88 168 -381 2014 139 3 7 chr18 29589454 29589801 -56399133 + AluSx SINE Alu 4 349 0 461 321 75 46 chr18 29589868 29590217 -56398717 + MLT1G1 LTR MaLR 237 595 0 745 259 79 22 chr18 29590230 29590723 -56398211 + L1ME LINE L1 2177 2667 -3548 618 271 90 7 chr18 29590747 29591024 -56397910 + L1ME LINE L1 2745 3044 -3171 1475 162 27 19 chr18 29591134 29591438 -56397496 + MSTA LTR MaLR 121 428 0 209 33 33 0 chr18 29591504 29591534 -56397400 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 356 221 63 11 chr18 29591542 29591637 -56397297 - L1MC4 LINE L1 -527 7515 7416 1686 276 125 41 chr18 29591664 29592561 -56396373 - L1MC4 LINE L1 -719 7323 6352 1278 269 74 25 chr18 29592778 29593329 -56395605 - L1ME2 LINE L1 -239 5925 5348 235 291 71 49 chr18 29593339 29593519 -56395415 - L1ME2 LINE L1 -848 5298 5106 219 69 0 0 chr18 29593519 29593548 -56395386 + (TTA)n Simple_repeat Simple_repeat 2 30 0 235 291 71 49 chr18 29593548 29593693 -56395241 - L1ME2 LINE L1 -1040 5106 4966 615 281 70 13 chr18 29593704 29594017 -56394917 - L1ME2 LINE L1 -1202 4944 4614 1262 231 191 112 chr18 29594036 29594788 -56394146 + MER52A LTR ERV1 663 1474 -281 425 276 19 19 chr18 29594790 29594946 -56393988 + MER52A LTR ERV1 1600 1755 0 547 229 119 5 chr18 29594993 29595194 -56393740 - L1ME2 LINE L1 -1546 4600 4377 387 0 0 0 chr18 29595214 29595257 -56393677 + (TG)n Simple_repeat Simple_repeat 2 44 0 203 190 0 35 chr18 29595386 29595444 -56393490 + (CGGGG)n Simple_repeat Simple_repeat 1 56 0 21 36 0 0 chr18 29595456 29595484 -56393450 + GC_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr18 29595528 29595559 -56393375 + GC_rich Low_complexity Low_complexity 1 31 0 1398 200 52 9 chr18 29595794 29596124 -56392810 + LTR19A LTR ERV1 143 486 0 270 320 0 0 chr18 29596124 29596224 -56392710 - L1ME2 LINE L1 -1834 4312 4213 1432 44 44 0 chr18 29596228 29596411 -56392523 + L1PA5 LINE L1 5964 6154 0 744 241 125 29 chr18 29596547 29596891 -56392043 + LTR37A LTR ERV1 19 395 -31 796 332 63 5 chr18 29596960 29597406 -56391528 - L1ME2 LINE L1 -2061 4085 3614 306 243 0 0 chr18 29597893 29597996 -56390938 + GA-rich Low_complexity Low_complexity 2 104 0 387 325 7 13 chr18 29598150 29598304 -56390630 + MLT1K LTR MaLR 431 583 -5 201 39 0 0 chr18 29598683 29598709 -56390225 + (T)n Simple_repeat Simple_repeat 1 26 0 1816 180 13 0 chr18 29599021 29599327 -56389607 - AluSx SINE Alu -2 310 1 24 0 0 0 chr18 29599334 29599358 -56389576 + AT_rich Low_complexity Low_complexity 1 24 0 2288 110 62 3 chr18 29599637 29599993 -56388941 - MER51B LTR ERV1 0 377 1 2898 156 96 121 chr18 29599995 29600905 -56388029 - MER51B-int LTR ERV1 -1 7815 6929 3623 125 22 2 chr18 29601005 29601779 -56387155 - MER51B-int LTR ERV1 -1076 6461 5625 392 138 106 32 chr18 29601775 29601869 -56387065 - MER51B-int LTR ERV1 -2188 5349 5249 * 1874 127 20 16 chr18 29601868 29602254 -56386680 - MER51-int LTR ERV1 -2572 2645 2210 2148 157 64 12 chr18 29602259 29602679 -56386255 - MER51-int LTR ERV1 -3261 1956 1515 * 2687 156 65 4 chr18 29602678 29603134 -56385800 - MER51-int LTR ERV1 -4551 3265 2838 210 71 0 0 chr18 29603134 29603162 -56385772 + (TA)n Simple_repeat Simple_repeat 1 28 0 2687 156 65 4 chr18 29603162 29603448 -56385486 - MER51-int LTR ERV1 -4978 2838 2336 2337 115 42 3 chr18 29603492 29603848 -56385086 + LTR10A LTR ERV1 178 547 -62 991 72 60 0 chr18 29603862 29604028 -56384906 - MER51-int LTR ERV1 -5831 1985 1810 763 165 28 97 chr18 29604028 29604204 -56384730 - MER4A LTR ERV1 -129 535 372 2507 138 15 30 chr18 29604311 29604710 -56384224 - MER51-int LTR ERV1 -6321 1495 1102 2086 130 0 0 chr18 29604710 29605010 -56383924 - AluSg SINE Alu -10 300 1 2507 138 15 30 chr18 29605010 29605072 -56383862 - MER51-int LTR ERV1 -6714 1102 1041 755 176 31 37 chr18 29605072 29605275 -56383659 - LTR10A LTR ERV1 0 609 366 1169 84 50 39 chr18 29605375 29605554 -56383380 - MER51B-int LTR ERV1 -7635 181 1 1723 127 112 26 chr18 29605554 29605901 -56383033 - MER51B LTR ERV1 0 377 1 429 336 81 25 chr18 29607238 29607559 -56381375 + HAL1 LINE L1 3 341 -2166 264 297 33 0 chr18 29607695 29607786 -56381148 + HAL1 LINE L1 1660 1753 -754 31 58 0 0 chr18 29608202 29608254 -56380680 + AT_rich Low_complexity Low_complexity 1 52 0 237 338 121 30 chr18 29608796 29608994 -56379940 - L2 LINE L2 -1405 1909 1694 1085 210 33 61 chr18 29609959 29610384 -56378550 + MLT2B1 LTR ERVL 1 483 -37 1082 160 50 6 chr18 29610386 29610702 -56378232 - L1MA8 LINE L1 -308 5872 5618 3617 161 32 33 chr18 29610703 29611188 -56377746 + L1M2 LINE L1 4607 5091 -1221 2140 129 56 8 chr18 29611188 29611545 -56377389 - THE1C LTR MaLR 0 375 2 3617 161 32 33 chr18 29611545 29612067 -56376867 + L1M2 LINE L1 5091 5598 -714 2135 136 0 0 chr18 29612592 29612887 -56376047 - AluSx SINE Alu -17 295 1 23 0 0 0 chr18 29613952 29613975 -56374959 + AT_rich Low_complexity Low_complexity 1 23 0 27 62 0 0 chr18 29615363 29615411 -56373523 + AT_rich Low_complexity Low_complexity 1 48 0 27 0 0 0 chr18 29615728 29615755 -56373179 + AT_rich Low_complexity Low_complexity 1 27 0 963 307 30 15 chr18 29616298 29616637 -56372297 + MLT1I LTR MaLR 58 401 -8 1923 137 9 37 chr18 29616654 29616975 -56371959 + AluSx SINE Alu 1 312 0 283 367 22 0 chr18 29617796 29617886 -56371048 - L2 LINE L2 -1 3312 3221 21 36 0 0 chr18 29618203 29618231 -56370703 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr18 29618244 29618267 -56370667 + AT_rich Low_complexity Low_complexity 1 23 0 212 195 24 0 chr18 29620977 29621018 -56367916 + CT-rich Low_complexity Low_complexity 2 43 0 225 333 17 78 chr18 29621596 29621776 -56367158 - MLT1L LTR MaLR -446 169 1 182 358 32 32 chr18 29621890 29621985 -56366949 - L2 LINE L2 -1 3312 3218 193 125 21 21 chr18 29622362 29622410 -56366524 + GA-rich Low_complexity Low_complexity 3 50 0 22 0 0 0 chr18 29622544 29622566 -56366368 + AT_rich Low_complexity Low_complexity 1 22 0 269 351 34 7 chr18 29622954 29623102 -56365832 + MLT1I LTR MaLR 1 152 -257 25 31 0 0 chr18 29626497 29626529 -56362405 + AT_rich Low_complexity Low_complexity 1 32 0 27 49 0 0 chr18 29626569 29626610 -56362324 + AT_rich Low_complexity Low_complexity 1 41 0 329 186 69 59 chr18 29626634 29626736 -56362198 + L1M4 LINE L1 4477 4579 -1567 358 281 79 79 chr18 29626892 29627120 -56361814 + L1M4 LINE L1 4799 5026 -1120 270 265 78 0 chr18 29627257 29627359 -56361575 + L1MEd LINE L1 924 1033 -5086 476 321 129 18 chr18 29677550 29677830 -56311104 - L2 LINE L2 -573 2741 2431 2805 105 13 15 chr18 29678310 29678903 -56310031 + L1PA11 LINE L1 5471 6126 -48 21 0 0 0 chr18 29679153 29679174 -56309760 + AT_rich Low_complexity Low_complexity 1 21 0 1237 89 0 0 chr18 29679598 29679756 -56309178 - AluY SINE Alu -17 294 137 639 26 0 0 chr18 29679757 29679834 -56309100 + L1PA4 LINE L1 6013 6089 -66 27 0 0 0 chr18 29679834 29679861 -56309073 + AT_rich Low_complexity Low_complexity 1 27 0 1333 147 114 106 chr18 29680294 29680681 -56308253 - MLT1B LTR MaLR 0 390 1 303 241 180 86 chr18 29680845 29681123 -56307811 + LTR16A1 LTR ERVL 147 450 -7 180 250 0 23 chr18 29681160 29681204 -56307730 + MIR SINE MIR 220 262 0 3077 178 44 1 chr18 29682844 29683546 -56305388 - L1 LINE L1 -1159 4987 4256 1946 131 3 3 chr18 29685383 29685689 -56303245 + THE1C-int LTR MaLR 1275 1580 0 1601 139 79 57 chr18 29685689 29686056 -56302878 + THE1C LTR MaLR 1 375 0 1434 210 35 18 chr18 29686056 29686399 -56302535 - MLT1C LTR MaLR -16 451 103 4728 155 5 11 chr18 29686524 29687374 -56301560 + Tigger1 DNA MER2_type 1566 2410 -8 342 0 0 0 chr18 29687414 29687452 -56301482 + (TG)n Simple_repeat Simple_repeat 2 39 0 307 348 34 6 chr18 29687453 29687631 -56301303 - LTR16B LTR ERVL -8 456 274 43 71 0 0 chr18 29687747 29687832 -56301102 + GC_rich Low_complexity Low_complexity 1 85 0 232 256 0 0 chr18 29687943 29688021 -56300913 - AluY SINE Alu -20 281 204 1398 156 56 7 chr18 29688059 29688329 -56300605 - AluSx SINE Alu -29 283 1 379 291 29 76 chr18 29688329 29688539 -56300395 + MIR SINE MIR 50 249 -13 247 339 18 9 chr18 29688549 29688661 -56300273 - L2 LINE L2 -1051 2263 2151 24 32 0 0 chr18 29689129 29689160 -56299774 + AT_rich Low_complexity Low_complexity 1 31 0 1127 251 50 59 chr18 29689408 29689830 -56299104 + MLT1D LTR MaLR 1 418 -87 338 212 82 0 chr18 29689826 29689911 -56299023 - MLT1A1 LTR MaLR -102 263 172 * 3528 84 4 4 chr18 29689942 29690432 -56298502 + THE1A-int LTR MaLR 1083 1572 -8 474 133 163 0 chr18 29690443 29690541 -56298393 + THE1A LTR MaLR 5 118 -237 2081 112 10 3 chr18 29691434 29691765 -56297169 + AluSx SINE Alu 1 312 0 4934 172 10 9 chr18 29693408 29694513 -56294421 + L1PB3 LINE L1 5042 6147 -7 681 199 6 0 chr18 29694634 29694800 -56294134 - L1 LINE L1 -2984 4581 4415 825 198 10 0 chr18 29694802 29694994 -56293940 - L1 LINE L1 -1754 4392 4199 3248 199 27 39 chr18 29695007 29696292 -56292642 - L1 LINE L1 -3158 4407 3137 360 267 46 41 chr18 29696395 29696590 -56292344 + L1PA15 LINE L1 5961 6156 -9 824 188 9 33 chr18 29696772 29696985 -56291949 + L1PB4 LINE L1 4358 4565 -1581 * 2662 172 2 4 chr18 29696963 29697440 -56291494 - MSTA-int LTR MaLR -1175 476 1 933 151 0 0 chr18 29697440 29697579 -56291355 - MSTA LTR MaLR 0 428 290 3256 194 6 13 chr18 29697696 29698383 -56290551 + L1PB4 LINE L1 5474 6155 -1 29 28 0 0 chr18 29698492 29698528 -56290406 + AT_rich Low_complexity Low_complexity 1 36 0 2782 172 21 10 chr18 29698532 29699113 -56289821 - L1MA6 LINE L1 -7 6293 5707 659 249 139 8 chr18 29699214 29699451 -56289483 - MER90 LTR ERV1 -253 322 55 25 0 0 0 chr18 29699539 29699564 -56289370 + AT_rich Low_complexity Low_complexity 1 25 0 552 265 60 0 chr18 29701030 29701181 -56287753 - MIR SINE MIR -12 250 91 278 180 16 0 chr18 29701197 29701258 -56287676 + (TA)n Simple_repeat Simple_repeat 1 62 0 233 132 0 19 chr18 29702014 29702067 -56286867 + (TAAA)n Simple_repeat Simple_repeat 2 53 0 203 188 0 0 chr18 29702289 29702321 -56286613 - MIR SINE MIR -12 250 219 282 194 32 0 chr18 29702955 29703017 -56285917 + MER112 DNA MER1_type 3 66 -194 4339 209 14 6 chr18 29703244 29704185 -56284749 - L1PA12 LINE L1 -4509 3072 2125 553 156 11 72 chr18 29704198 29704378 -56284556 - L1PA12 LINE L1 -5426 2155 1987 3487 202 20 28 chr18 29704635 29705230 -56283704 - L1 LINE L1 -1853 4293 3704 2177 109 3 0 chr18 29705230 29705524 -56283410 - AluSp SINE Alu -18 295 1 3487 202 20 28 chr18 29705524 29705756 -56283178 - L1 LINE L1 -2442 3704 3472 3623 136 89 19 chr18 29706032 29706760 -56282174 - LTR49-int LTR ERV1 -1671 4927 4149 1701 136 8 0 chr18 29706760 29707017 -56281917 - LTR49-int LTR ERV1 -6292 466 208 213 39 0 0 chr18 29707018 29707044 -56281890 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 901 260 72 14 chr18 29707067 29707344 -56281590 - LTR49-int LTR ERV1 -4119 2212 1920 857 130 7 0 chr18 29707802 29707940 -56280994 - L1PA13 LINE L1 -4 6159 6021 213 409 0 11 chr18 29708157 29708250 -56280684 + MIR SINE MIR 20 111 -97 25 0 0 0 chr18 29709188 29709213 -56279721 + AT_rich Low_complexity Low_complexity 1 25 0 692 181 108 24 chr18 29711912 29712078 -56276856 + MLT1B LTR MaLR 206 385 -5 378 326 49 56 chr18 29712729 29713033 -56275901 + L1M4 LINE L1 2401 2702 -3444 370 183 17 0 chr18 29713039 29713099 -56275835 + AluJ/FLAM SINE Alu 3 63 -239 964 291 21 0 chr18 29715405 29715639 -56273295 - MIR SINE MIR 0 262 24 1913 216 25 2 chr18 29715866 29716264 -56272670 - MST-int LTR MaLR -243 1408 1002 238 236 0 0 chr18 29716364 29716419 -56272515 + MER3 DNA MER1_type 155 209 0 284 241 36 0 chr18 29717377 29717460 -56271474 - L1ME LINE L1 -303 5818 5733 205 309 79 20 chr18 29717926 29718078 -56270856 - L2 LINE L2 -1269 2045 1885 263 319 89 22 chr18 29718734 29718869 -56270065 - MIR SINE MIR 0 262 119 382 304 9 27 chr18 29719239 29719351 -56269583 + MIR SINE MIR 33 142 -66 529 240 48 16 chr18 29719417 29719542 -56269392 + L2 LINE L2 3177 3305 -8 1412 208 46 9 chr18 29720296 29720693 -56268241 - L1MCa LINE L1 -3947 2479 2125 237 160 0 64 chr18 29720825 29720919 -56268015 + (TA)n Simple_repeat Simple_repeat 1 88 0 559 222 0 27 chr18 29720932 29721117 -56267817 + (TA)n Simple_repeat Simple_repeat 1 180 0 1208 188 28 15 chr18 29721984 29722659 -56266275 - L1MA5 LINE L1 -300 6702 5867 917 177 45 25 chr18 29722865 29723063 -56265871 + Tigger7 DNA MER2_type 329 530 -1957 448 235 29 20 chr18 29723030 29723132 -56265802 + Tigger7 DNA MER2_type 2385 2487 0 * 8276 185 14 22 chr18 29724167 29725925 -56263009 - L1MA5 LINE L1 -3962 2887 1144 1153 216 42 90 chr18 29726032 29726340 -56262594 + MLT2B1 LTR ERVL 182 472 -48 203 0 37 0 chr18 29726340 29726367 -56262567 + (TAGA)n Simple_repeat Simple_repeat 1 28 0 1153 216 42 90 chr18 29726367 29726414 -56262520 + MLT2B1 LTR ERVL 472 520 0 22 0 0 0 chr18 29726837 29726859 -56262075 + AT_rich Low_complexity Low_complexity 1 22 0 190 277 227 8 chr18 29727442 29727561 -56261373 - MIR SINE MIR -1 261 117 31 0 0 0 chr18 29729879 29729910 -56259024 + AT_rich Low_complexity Low_complexity 1 31 0 316 71 36 0 chr18 29730780 29730836 -56258098 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 1866 131 7 20 chr18 29731278 29731575 -56257359 + AluSx SINE Alu 1 293 -19 397 257 110 15 chr18 29732171 29732307 -56256627 - MER3 DNA MER1_type -60 149 1 240 200 49 108 chr18 29733151 29733336 -56255598 + MER112 DNA MER1_type 4 177 -83 794 184 146 0 chr18 29733510 29733668 -56255266 - MSTA LTR MaLR -247 181 1 762 218 23 36 chr18 29733668 29733950 -56254984 - MLT1A1 LTR MaLR -7 358 1 4608 170 43 35 chr18 29734070 29735187 -56253747 - L1MA8 LINE L1 -5 6286 5170 516 210 19 98 chr18 29735290 29735495 -56253439 + L1ME LINE L1 5510 5698 -468 23 0 0 0 chr18 29735914 29735937 -56252997 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr18 29736859 29736879 -56252055 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 762 186 81 31 chr18 29736902 29737063 -56251871 - AluJo SINE Alu -138 174 6 25 0 0 0 chr18 29737219 29737244 -56251690 + AT_rich Low_complexity Low_complexity 1 25 0 774 307 73 52 chr18 29737401 29737886 -56251048 + L2 LINE L2 2579 3064 -208 30 27 0 0 chr18 29739556 29739593 -56249341 + AT_rich Low_complexity Low_complexity 1 37 0 279 135 29 48 chr18 29739593 29739697 -56249237 + (TA)n Simple_repeat Simple_repeat 1 102 0 219 167 0 0 chr18 29739797 29739839 -56249095 + CT-rich Low_complexity Low_complexity 3 44 0 1292 144 0 108 chr18 29739841 29740118 -56248816 + L1MA9 LINE L1 5698 5944 -368 1928 161 3 0 chr18 29740260 29740596 -56248338 - L1P LINE L1 -1628 4518 4182 * 3693 124 5 0 chr18 29740589 29741145 -56247789 + L1P LINE L1 3630 4188 -1958 306 146 0 0 chr18 29741328 29741376 -56247558 - L1P4 LINE L1 -550 5616 5569 2111 139 32 21 chr18 29741460 29742034 -56246900 - L1PA16 LINE L1 -552 5614 5041 1311 138 134 0 chr18 29742032 29742263 -56246671 + L1PA16 LINE L1 5623 5884 -282 * 3079 138 28 41 chr18 29743097 29743662 -56245272 + MER34B LTR ERV1 1 558 -7 411 288 80 31 chr18 29743747 29743910 -56245024 + MIR3 SINE MIR 19 189 -19 23 33 0 0 chr18 29744138 29744168 -56244766 + AT_rich Low_complexity Low_complexity 1 30 0 12241 46 7 1 chr18 29744384 29745933 -56243001 + L1P LINE L1 2925 4481 -1665 494 252 58 0 chr18 29745930 29746085 -56242849 - L1M2 LINE L1 -4527 2322 2159 * 1614 174 17 30 chr18 29746195 29746494 -56242440 - Ricksha DNA DNA -1764 1482 1188 536 242 13 27 chr18 29746496 29746645 -56242289 - MLT2D LTR ERVL -398 155 9 * 1859 150 83 3 chr18 29746511 29746850 -56242084 - Ricksha DNA DNA -1558 488 123 372 22 0 0 chr18 29746887 29746932 -56242002 + (CA)n Simple_repeat Simple_repeat 2 46 0 21 57 0 0 chr18 29746935 29746970 -56241964 + AT_rich Low_complexity Low_complexity 1 35 0 * 757 214 14 33 chr18 29746968 29747012 -56241922 - MER31-int LTR ERV1 -3885 1051 1008 1233 223 19 45 chr18 29747012 29747322 -56241612 - AluJo SINE Alu -8 304 3 757 214 14 33 chr18 29747322 29747487 -56241447 - MER31-int LTR ERV1 -3928 1008 846 396 370 32 25 chr18 29747735 29748140 -56240794 + LTR33 LTR ERVL 105 512 -9 4459 252 12 15 chr18 29749513 29750801 -56238133 - L1P LINE L1 -1736 4410 3127 30 69 0 0 chr18 29751230 29751288 -56237646 + AT_rich Low_complexity Low_complexity 1 58 0 2957 230 33 43 chr18 29751341 29752946 -56235988 + L1MB1 LINE L1 4451 6039 -129 1500 229 17 41 chr18 29753151 29753566 -56235368 - MER92B LTR ERV1 -231 405 1 1953 259 53 25 chr18 29753566 29753995 -56234939 - L1MCb LINE L1 -5163 882 428 1899 229 30 40 chr18 29753995 29754520 -56234414 + MLT2B1 LTR ERVL 1 520 0 1953 259 53 25 chr18 29754520 29754735 -56234199 - L1MCb LINE L1 -5617 428 220 1046 137 17 6 chr18 29754749 29754924 -56234010 + AluSq SINE Alu 2 178 -135 2197 103 3 0 chr18 29755035 29755335 -56233599 - AluSq SINE Alu -8 305 5 264 333 7 67 chr18 29755357 29755492 -56233442 + MLT1H LTR MaLR 227 353 -196 1904 278 24 5 chr18 29756491 29757139 -56231795 - L1M2 LINE L1 -4904 2305 1403 1529 240 49 60 chr18 29757478 29758049 -56230885 - L1ME1 LINE L1 -20 6146 5582 219 36 0 0 chr18 29758139 29758167 -56230767 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 689 212 15 8 chr18 29758174 29758306 -56230628 - FRAM SINE Alu -35 141 9 2229 112 6 6 chr18 29760844 29761156 -56227778 - AluSx SINE Alu 0 312 1 497 261 146 24 chr18 29761749 29761914 -56227020 + MER5A DNA MER1_type 4 188 -1 190 364 45 9 chr18 29762638 29762748 -56226186 + L2 LINE L2 2940 3053 -219 237 176 32 72 chr18 29762835 29762960 -56225974 + (TATATG)n Simple_repeat Simple_repeat 6 125 0 187 250 20 0 chr18 29762963 29763063 -56225871 + (TA)n Simple_repeat Simple_repeat 1 102 0 278 146 0 0 chr18 29763150 29763191 -56225743 + L2 LINE L2 3258 3298 -15 746 221 26 7 chr18 29764380 29764534 -56224400 - MLT1D LTR MaLR -348 157 1 958 279 57 30 chr18 29764535 29764868 -56224066 + L2 LINE L2 2972 3313 0 213 347 32 0 chr18 29765532 29765627 -56223307 + MIR SINE MIR 65 162 -100 4059 19 0 0 chr18 29766471 29766940 -56221994 + L1PA2 LINE L1 5687 6155 0 358 80 94 7 chr18 29767297 29767435 -56221499 + (TA)n Simple_repeat Simple_repeat 1 150 0 24 32 0 0 chr18 29768794 29768825 -56220109 + AT_rich Low_complexity Low_complexity 1 31 0 30 0 0 0 chr18 29768953 29768983 -56219951 + AT_rich Low_complexity Low_complexity 1 30 0 344 233 76 96 chr18 29769410 29769659 -56219275 + L1ME4a LINE L1 5873 6116 -5 319 222 42 85 chr18 29770009 29770221 -56218713 - L1MEc LINE L1 -4164 2232 2030 28 29 0 0 chr18 29770308 29770343 -56218591 + AT_rich Low_complexity Low_complexity 1 35 0 2305 64 0 0 chr18 29770509 29770819 -56218115 - AluY SINE Alu 0 310 1 321 231 115 39 chr18 29770885 29771015 -56217919 + L1ME4a LINE L1 5817 5956 -165 256 231 0 15 chr18 29771062 29771127 -56217807 + (TA)n Simple_repeat Simple_repeat 2 65 0 1302 233 0 18 chr18 29771331 29771614 -56217320 + AluJo SINE Alu 1 278 -34 191 36 36 0 chr18 29771703 29771731 -56217203 + (TA)n Simple_repeat Simple_repeat 2 30 0 5786 217 161 8 chr18 29771989 29772888 -56216046 + L1PA8 LINE L1 1572 2333 -3813 5843 96 25 13 chr18 29772888 29774164 -56214770 + L1PA11 LINE L1 4889 6174 0 5786 217 161 8 chr18 29774164 29775095 -56213839 + L1PA8 LINE L1 2333 3681 -2465 1063 117 0 0 chr18 29778188 29778359 -56210575 - L1P LINE L1 -2963 3183 3013 * 10471 115 18 14 chr18 29778354 29780824 -56208110 + L1PA8 LINE L1 3635 6115 -57 2335 39 7 4 chr18 29782399 29782680 -56206254 + AluY SINE Alu 20 301 -10 277 197 2 55 chr18 29782719 29782806 -56206128 + AluS SINE Alu 3 68 -235 403 304 52 32 chr18 29783140 29783390 -56205544 - L1PBa LINE L1 -6606 257 3 4777 166 9 3 chr18 29783727 29784608 -56204326 + L1MA4A LINE L1 5417 6302 -1 230 132 38 19 chr18 29784775 29784823 -56204111 - MLT2B1 LTR ERVL -2 518 470 1465 203 41 17 chr18 29784823 29785168 -56203766 - MLT1C LTR MaLR 0 467 115 189 171 0 0 chr18 29785248 29785283 -56203651 + (CATATA)n Simple_repeat Simple_repeat 4 38 0 8704 214 14 8 chr18 29785427 29785562 -56203372 + L1 LINE L1 3191 3324 -2822 803 226 79 71 chr18 29785562 29785902 -56203032 + MER2 DNA MER2_type 2 344 0 8704 214 14 8 chr18 29785902 29787832 -56201102 + L1 LINE L1 3324 5268 -878 396 0 0 0 chr18 29787868 29787912 -56201022 + (CA)n Simple_repeat Simple_repeat 1 44 0 2116 194 24 10 chr18 29788474 29789181 -56199753 + L1M3 LINE L1 4899 5616 -567 1539 210 0 0 chr18 29789181 29789462 -56199472 + AluJo SINE Alu 1 281 -31 1780 144 87 31 chr18 29789478 29789833 -56199101 - THE1C LTR MaLR 0 375 1 1213 179 40 5 chr18 29789877 29790101 -56198833 - MSTB LTR MaLR 0 426 195 457 165 0 24 chr18 29790101 29790186 -56198748 + L1P LINE L1 3989 4071 -2075 1941 109 39 7 chr18 29790570 29790854 -56198080 + AluSx SINE Alu 5 297 -15 952 312 121 19 chr18 29791227 29791789 -56197145 - L2 LINE L2 -1 3312 2678 216 0 0 0 chr18 29792147 29792171 -56196763 + (CTAGT)n Simple_repeat Simple_repeat 5 28 0 1004 317 119 2 chr18 29792182 29792602 -56196332 - L2 LINE L2 -661 2653 2185 189 372 104 30 chr18 29792633 29792797 -56196137 + L2 LINE L2 2801 2976 -338 1635 207 113 5 chr18 29793777 29794168 -56194766 - MLT1D LTR MaLR 0 505 73 1157 220 128 44 chr18 29795116 29795547 -56193387 + MLT1C LTR MaLR 1 467 0 1598 273 36 8 chr18 29795812 29796339 -56192595 + L1MCb LINE L1 580 1121 -4924 608 242 28 40 chr18 29796344 29796592 -56192342 + L1MCb LINE L1 2565 2809 -3936 2229 213 53 20 chr18 29796888 29797670 -56191264 + L1MA10 LINE L1 4765 5585 -727 1540 196 24 7 chr18 29797670 29797961 -56190973 - MSTA LTR MaLR 0 428 133 3056 193 45 47 chr18 29797969 29798721 -56190213 + L1MA10 LINE L1 5582 6332 -2 21 0 0 0 chr18 29798735 29798756 -56190178 + AT_rich Low_complexity Low_complexity 1 21 0 1307 98 0 6 chr18 29799328 29799501 -56189433 + AluSq SINE Alu 126 297 -16 328 330 52 56 chr18 29800254 29800524 -56188410 + L2 LINE L2 3027 3295 -18 584 261 31 75 chr18 29801015 29801365 -56187569 + MER41D LTR ERV1 212 555 -2 470 305 12 12 chr18 29801389 29801553 -56187381 - LTR33 LTR ERVL -321 200 37 918 285 124 19 chr18 29803230 29803609 -56185325 + L2 LINE L2 1901 2319 -995 613 304 48 33 chr18 29803609 29803879 -56185055 - MLT1I LTR MaLR -13 396 123 706 228 44 28 chr18 29803879 29804059 -56184875 + L2 LINE L2 3128 3310 -3 343 319 43 33 chr18 29804131 29804341 -56184593 - L1M4 LINE L1 -3147 3181 2970 1712 214 32 18 chr18 29804703 29805137 -56183797 + L1M1 LINE L1 16 455 -7110 680 209 71 35 chr18 29805348 29805630 -56183304 - L1 LINE L1 -2760 3386 3095 4916 246 36 18 chr18 29805633 29807767 -56181167 - L1M4 LINE L1 -3387 2941 819 3785 176 12 6 chr18 29807794 29808446 -56180488 - L1M4 LINE L1 -4670 658 3 2612 154 8 38 chr18 29808649 29809168 -56179766 + L1MC/D LINE L1 5197 5730 -512 207 0 0 0 chr18 29809168 29809191 -56179743 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2186 95 3 7 chr18 29809194 29809479 -56179455 - AluSg SINE Alu -25 285 2 2612 154 8 38 chr18 29809479 29809521 -56179413 + L1MC/D LINE L1 5732 5744 -498 609 249 92 127 chr18 29809551 29810041 -56178893 + L2 LINE L2 2841 3313 0 21 0 0 0 chr18 29810874 29810895 -56178039 + AT_rich Low_complexity Low_complexity 1 21 0 524 290 91 5 chr18 29810981 29811167 -56177767 - MIR SINE MIR -24 238 37 210 37 0 0 chr18 29812392 29812419 -56176515 + (CAAAC)n Simple_repeat Simple_repeat 3 29 0 761 174 6 17 chr18 29812986 29813158 -56175776 + L1 LINE L1 5219 5388 -758 21 36 0 0 chr18 29813158 29813186 -56175748 + AT_rich Low_complexity Low_complexity 1 28 0 1204 189 12 0 chr18 29815259 29815508 -56173426 + L1MA6 LINE L1 6049 6300 0 21 36 0 0 chr18 29815508 29815536 -56173398 + AT_rich Low_complexity Low_complexity 1 28 0 257 225 28 0 chr18 29815611 29815682 -56173252 - L1MB7 LINE L1 0 6184 6112 1763 111 14 14 chr18 29815718 29816007 -56172927 + AluY SINE Alu 1 289 -22 837 182 23 68 chr18 29816664 29816928 -56172006 + AluJo SINE Alu 56 307 -5 1197 125 60 0 chr18 29817112 29817296 -56171638 - AluSg/x SINE Alu -5 307 113 458 151 14 0 chr18 29817310 29817383 -56171551 - AluSg/x SINE Alu -144 168 95 1985 154 105 0 chr18 29818834 29819204 -56169730 - MSTB LTR MaLR 0 426 18 2075 176 32 20 chr18 29819434 29819838 -56169096 + MSTA LTR MaLR 20 428 0 9616 212 51 21 chr18 29819838 29822283 -56166651 + L1 LINE L1 2494 5011 -1135 338 313 54 54 chr18 29823303 29823469 -56165465 + MIR3 SINE MIR 25 190 -18 469 306 22 0 chr18 29823548 29823682 -56165252 - MIR SINE MIR -62 200 64 788 23 62 0 chr18 29823809 29823939 -56164995 + (TAGA)n Simple_repeat Simple_repeat 4 141 0 2105 185 58 68 chr18 29823940 29824454 -56164480 - MLT2B2 LTR ERVL -3 512 4 462 36 0 0 chr18 29824454 29824510 -56164424 + (TAGA)n Simple_repeat Simple_repeat 2 57 0 293 222 12 123 chr18 29825990 29826152 -56162782 + MIR SINE MIR 61 204 -58 287 304 136 0 chr18 29826657 29826782 -56162152 - MIR SINE MIR -107 155 14 6432 174 24 7 chr18 29827497 29828707 -56160227 + Ricksha DNA DNA 2017 3246 0 375 187 44 178 chr18 29828709 29829024 -56159910 + MER31-int LTR ERV1 1163 1435 -3501 32 26 0 0 chr18 29829024 29829063 -56159871 + AT_rich Low_complexity Low_complexity 1 39 0 313 250 0 62 chr18 29829063 29829159 -56159775 - L1MC4 LINE L1 -1340 6702 6613 41 0 0 0 chr18 29829161 29829202 -56159732 + AT_rich Low_complexity Low_complexity 1 41 0 304 223 21 75 chr18 29829213 29829307 -56159627 + L1MC4 LINE L1 6614 6702 -1340 572 256 94 57 chr18 29829481 29829733 -56159201 + MER31-int LTR ERV1 1704 1945 -2991 2170 54 14 7 chr18 29829733 29830011 -56158923 + AluSg SINE Alu 14 293 -17 572 256 94 57 chr18 29830011 29830325 -56158609 + MER31-int LTR ERV1 1945 2335 -2601 1612 130 11 18 chr18 29830330 29830645 -56158289 - AluY SINE Alu 0 313 1 4736 169 181 60 chr18 29831038 29832424 -56156510 + MER52A LTR ERV1 1 1633 -122 377 301 123 44 chr18 29833232 29833435 -56155499 + L2 LINE L2 3094 3312 -1 1177 214 10 5 chr18 29834433 29834497 -56154437 - L1M4 LINE L1 -872 5274 5212 3617 34 2 0 chr18 29834497 29834935 -56153999 - L1PA4 LINE L1 0 6155 5717 1177 214 10 5 chr18 29834935 29835160 -56153774 - L1M4 LINE L1 -934 5212 4979 841 121 15 0 chr18 29835162 29835294 -56153640 - L1MA1 LINE L1 0 6302 6169 1989 238 8 4 chr18 29835321 29835796 -56153138 - L1M4 LINE L1 -3114 3032 2556 280 167 14 0 chr18 29835900 29835965 -56152969 - MSTB LTR MaLR -355 71 1 2592 209 7 50 chr18 29835975 29836682 -56152252 - L1 LINE L1 -2149 3997 3321 1438 199 85 53 chr18 29836682 29837223 -56151711 + MLT2A2 LTR ERVL 1 554 0 3289 243 74 7 chr18 29837223 29838225 -56150709 - L1 LINE L1 -2821 3325 2257 852 146 49 0 chr18 29838225 29838369 -56150565 - MSTB LTR MaLR 0 426 276 467 317 59 31 chr18 29840203 29840490 -56148444 + L2 LINE L2 1804 2098 -1216 1402 192 83 49 chr18 29840492 29840579 -56148355 - MER67C LTR ERV1 -4 510 427 1824 22 5 5 chr18 29840579 29840802 -56148132 - L1PA2 LINE L1 0 6155 5933 1402 192 83 49 chr18 29840802 29841162 -56147772 - MER67C LTR ERV1 -87 427 83 3533 134 39 10 chr18 29841342 29841955 -56146979 + Tigger3(Golem) DNA MER2_type 2328 2958 -71 4618 78 5 1 chr18 29841966 29842691 -56146243 + L1PA8 LINE L1 5147 5873 -299 415 158 0 0 chr18 29842817 29842893 -56146041 - L1MC2 LINE L1 -492 5852 5777 2340 120 94 5 chr18 29843128 29843521 -56145413 + MSTA LTR MaLR 1 428 0 200 194 0 0 chr18 29844018 29844054 -56144880 + (CATA)n Simple_repeat Simple_repeat 4 39 0 917 130 0 7 chr18 29844970 29845108 -56143826 + AluSq/x SINE Alu 3 139 -174 2577 268 79 17 chr18 29845444 29846410 -56142524 + L1MEc LINE L1 49 1074 -5322 265 164 0 18 chr18 29846410 29846465 -56142469 + MER116 DNA Mariner 27 80 0 30 0 0 0 chr18 29846587 29846617 -56142317 + AT_rich Low_complexity Low_complexity 1 30 0 2437 234 77 19 chr18 29846635 29847752 -56141182 + L1MEc LINE L1 1974 3124 -3091 947 222 49 14 chr18 29847758 29848042 -56140892 + L1MEc LINE L1 3243 3536 -2679 1574 193 154 14 chr18 29848043 29848401 -56140533 + MLT2C2 LTR ERVL 6 413 -51 329 221 41 0 chr18 29848409 29848531 -56140403 + (TA)n Simple_repeat Simple_repeat 1 127 0 263 95 32 32 chr18 29848552 29848615 -56140319 + (TA)n Simple_repeat Simple_repeat 2 64 0 354 123 0 31 chr18 29848617 29848682 -56140252 + MLT2C2 LTR ERVL 458 520 0 310 150 38 38 chr18 29848683 29848763 -56140171 + HERVL-C2 LTR ERVL 2 81 -5573 749 296 42 21 chr18 29848778 29849062 -56139872 + HERVL-C2 LTR ERVL 211 500 -5264 * 2138 186 4 61 chr18 29849050 29849512 -56139422 + ERVL LTR ERVL 3477 3912 -1852 222 326 84 0 chr18 29850049 29850144 -56138790 + L2 LINE L2 3155 3257 -15 1228 175 0 9 chr18 29850509 29850737 -56138197 + L1PA15 LINE L1 5940 6165 0 378 307 92 18 chr18 29850760 29850923 -56138011 - L1ME LINE L1 -530 5632 5458 263 274 0 0 chr18 29850983 29851045 -56137889 - MIR SINE MIR -123 139 78 1847 161 117 31 chr18 29851531 29851923 -56137011 + MSTA LTR MaLR 1 426 -2 411 240 93 49 chr18 29852228 29852411 -56136523 + MIR SINE MIR 71 261 -1 2439 57 7 0 chr18 29852580 29852879 -56136055 + AluY SINE Alu 3 303 -8 3593 208 98 55 chr18 29853931 29854995 -56133939 + LTR28 LTR ERV1 1 1735 -20 2216 119 7 0 chr18 29855438 29855748 -56133186 + AluSx SINE Alu 1 312 0 1988 115 3 7 chr18 29855760 29856046 -56132888 + AluSx SINE Alu 1 285 -27 2694 22 0 9 chr18 29856223 29856540 -56132394 + AluYb8 SINE Alu 1 314 -4 604 143 0 11 chr18 29856540 29856631 -56132303 - MLT1B LTR MaLR -298 92 3 687 71 10 20 chr18 29856877 29856976 -56131958 + AluSp/q SINE Alu 206 303 -10 21 0 0 0 chr18 29856987 29857008 -56131926 + AT_rich Low_complexity Low_complexity 1 21 0 1554 82 17 35 chr18 29857031 29857262 -56131672 - L1PA7 LINE L1 -3 6151 5925 8345 162 29 8 chr18 29857330 29858835 -56130099 + Tigger1 DNA MER2_type 1 1536 -882 618 214 107 78 chr18 29858936 29859179 -56129755 - MLT1A2 LTR MaLR -140 250 1 577 258 42 81 chr18 29859181 29859491 -56129443 + L1ME2 LINE L1 5750 6047 -117 255 250 68 57 chr18 29859943 29860031 -56128903 + MER89-int LTR ERV1 884 972 -5829 548 279 50 22 chr18 29862317 29862496 -56126438 - MIR SINE MIR -78 184 1 365 307 55 8 chr18 29862680 29862807 -56126127 - MIR SINE MIR -118 144 12 200 185 19 0 chr18 29863377 29863431 -56125503 + GA-rich Low_complexity Low_complexity 4 58 0 21 0 0 0 chr18 29865684 29865705 -56123229 + AT_rich Low_complexity Low_complexity 1 21 0 231 175 48 16 chr18 29866154 29866217 -56122717 + T-rich Low_complexity Low_complexity 1 65 0 23 54 0 0 chr18 29866334 29866371 -56122563 + AT_rich Low_complexity Low_complexity 1 37 0 31 0 0 0 chr18 29866695 29866726 -56122208 + AT_rich Low_complexity Low_complexity 1 31 0 402 21 0 0 chr18 29866919 29866966 -56121968 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 727 169 23 8 chr18 29866968 29867098 -56121836 - AluSc SINE Alu -33 276 145 23 33 0 0 chr18 29867142 29867172 -56121762 + AT_rich Low_complexity Low_complexity 1 30 0 429 186 128 0 chr18 29867202 29867304 -56121630 + MER67D LTR ERV1 4 118 -396 1882 83 0 8 chr18 29867306 29867691 -56121243 + L1PA7 LINE L1 5115 5497 -657 5105 73 1 3 chr18 29867800 29868473 -56120461 + L1PA7 LINE L1 5475 6146 -8 1968 197 30 5 chr18 29868574 29868975 -56119959 + MER67D LTR ERV1 104 514 0 589 224 71 49 chr18 29870261 29870444 -56118490 + MER5A DNA MER1_type 2 188 -1 22 35 0 0 chr18 29872110 29872139 -56116795 + AT_rich Low_complexity Low_complexity 1 29 0 41 66 0 0 chr18 29872873 29872949 -56115985 + AT_rich Low_complexity Low_complexity 1 76 0 1546 193 10 27 chr18 29873818 29874114 -56114820 + AluJb SINE Alu 1 291 -21 860 257 121 16 chr18 29874403 29874616 -56114318 - L1MDa LINE L1 -5595 945 756 3326 198 52 25 chr18 29874616 29875420 -56113514 - LTR1B LTR ERV1 0 826 1 860 257 121 16 chr18 29875420 29875650 -56113284 - L1MDa LINE L1 -5784 756 343 768 130 230 27 chr18 29876271 29876463 -56112471 - MSTA LTR MaLR -153 202 1 4266 169 11 9 chr18 29876463 29877196 -56111738 - MSTA-int LTR MaLR 0 1580 847 507 139 0 12 chr18 29877884 29877970 -56110964 - AluJ/FRAM SINE Alu -9 303 219 826 212 0 6 chr18 29877970 29878140 -56110794 - AluJb SINE Alu -11 301 133 503 287 72 57 chr18 29880194 29880459 -56108475 + MLT1G LTR MaLR 1 269 -321 1671 192 23 7 chr18 29881295 29881420 -56107514 + AluJb SINE Alu 1 122 -190 327 25 0 0 chr18 29881420 29881460 -56107474 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 1671 192 23 7 chr18 29881460 29881641 -56107293 + AluJb SINE Alu 122 312 0 306 0 0 0 chr18 29882378 29882412 -56106522 + (TAA)n Simple_repeat Simple_repeat 2 35 0 315 289 0 0 chr18 29882452 29882535 -56106399 - L2 LINE L2 0 3313 3231 529 291 53 33 chr18 29882572 29882874 -56106060 + L1M4 LINE L1 3110 3417 -2729 28 29 0 0 chr18 29883095 29883130 -56105804 + AT_rich Low_complexity Low_complexity 1 35 0 243 0 0 0 chr18 29883255 29883282 -56105652 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 880 189 0 0 chr18 29883286 29883429 -56105505 - FRAM SINE Alu -33 143 1 298 316 0 0 chr18 29883432 29883527 -56105407 - MIR SINE MIR -45 217 123 231 392 91 10 chr18 29883581 29883890 -56105044 - L2 LINE L2 -609 2705 2372 1594 180 25 0 chr18 29883934 29884218 -56104716 - AluJo SINE Alu -21 291 1 447 354 119 42 chr18 29884318 29885193 -56103741 - L2 LINE L2 -1017 2297 1356 1850 261 142 8 chr18 29886201 29886848 -56102086 - MER50 LTR ERV1 0 734 1 297 98 0 20 chr18 29887025 29887076 -56101858 + Alu SINE Alu 248 297 -5 21 0 0 0 chr18 29887194 29887215 -56101719 + AT_rich Low_complexity Low_complexity 1 21 0 837 144 22 0 chr18 29888022 29888161 -56100773 - MER75 DNA T2_type -372 142 1 223 382 53 0 chr18 29890818 29890894 -56098040 - L2 LINE L2 -47 3225 3146 2315 158 0 11 chr18 29890956 29891336 -56097598 + LTR60 LTR ERV1 3 378 -208 1020 137 14 42 chr18 29891440 29891652 -56097282 + LTR60 LTR ERV1 381 586 0 336 198 47 0 chr18 29892237 29892323 -56096611 + L1M4 LINE L1 4664 4753 -1393 3360 117 36 35 chr18 29892323 29892902 -56096032 + LTR19B LTR ERV1 1 580 0 291 274 9 35 chr18 29893045 29893158 -56095776 - LTR16A1 LTR ERVL 0 457 348 430 246 35 105 chr18 29893395 29893623 -56095311 + MLT1K LTR MaLR 377 588 0 21 0 0 0 chr18 29894032 29894053 -56094881 + AT_rich Low_complexity Low_complexity 1 21 0 288 53 0 0 chr18 29894141 29894179 -56094755 + (CA)n Simple_repeat Simple_repeat 1 38 0 320 196 23 8 chr18 29894179 29894306 -56094628 + (TA)n Simple_repeat Simple_repeat 1 129 0 1211 179 0 31 chr18 29894308 29894537 -56094397 - AluJb SINE Alu -13 299 78 2085 134 39 20 chr18 29894796 29895153 -56093781 - THE1B LTR MaLR 0 364 1 11520 109 3 0 chr18 29895159 29896728 -56092206 - THE1B-int LTR MaLR -6 1574 1 2061 147 33 22 chr18 29896728 29897088 -56091846 - THE1B LTR MaLR 0 364 1 231 133 0 0 chr18 29897283 29897328 -56091606 + (TG)n Simple_repeat Simple_repeat 2 46 0 587 276 69 137 chr18 29898620 29898714 -56090220 - L2 LINE L2 0 3313 3214 1147 165 63 119 chr18 29898714 29899017 -56089917 + AluJo SINE Alu 1 286 -16 587 276 69 137 chr18 29899017 29899549 -56089385 - L2 LINE L2 -99 3214 2731 1927 143 17 0 chr18 29900540 29900827 -56088107 + AluSg SINE Alu 1 292 -18 2185 138 6 9 chr18 29901180 29901527 -56087407 - MER7A DNA MER2_type -2 344 1 375 347 0 0 chr18 29951861 29951956 -56036978 - MER58 DNA MER1_type -119 96 2 1338 210 74 27 chr18 29952209 29952547 -56036387 + MLT1A1 LTR MaLR 10 363 -2 768 296 28 31 chr18 29952585 29952746 -56036188 - ERVL LTR ERVL -3302 2462 2301 1822 187 33 0 chr18 29952746 29953083 -56035851 - MER7A DNA MER2_type 0 346 1 768 296 28 31 chr18 29953083 29953208 -56035726 - ERVL LTR ERVL -3463 2301 2177 538 348 71 8 chr18 29953238 29953505 -56035429 - ERVL LTR ERVL -3720 2044 1761 24 53 0 0 chr18 29953913 29953951 -56034983 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr18 29954345 29954369 -56034565 + AT_rich Low_complexity Low_complexity 1 24 0 1950 130 0 3 chr18 29954828 29955121 -56033813 - AluSx SINE Alu -17 295 4 237 191 15 15 chr18 29955302 29955370 -56033564 + (TA)n Simple_repeat Simple_repeat 1 68 0 678 269 113 34 chr18 29955592 29956076 -56032858 + L1MEc LINE L1 1731 2270 -4126 441 147 27 0 chr18 29956076 29956151 -56032783 - MADE1 DNA Mariner 0 80 4 678 269 113 34 chr18 29956151 29956249 -56032685 + L1MEc LINE L1 2270 2359 -4037 386 335 31 26 chr18 29956388 29956579 -56032355 - MIR SINE MIR 0 262 71 195 286 32 0 chr18 29956647 29956710 -56032224 + L2 LINE L2 2694 2758 -556 249 424 0 0 chr18 29957585 29957684 -56031250 + L2 LINE L2 3137 3235 -37 575 273 32 43 chr18 29958950 29959203 -56029731 + HAL1 LINE L1 2225 2474 -33 2113 118 0 3 chr18 29959213 29959509 -56029425 + AluSc SINE Alu 1 295 -14 420 67 0 0 chr18 29959545 29959605 -56029329 + (TA)n Simple_repeat Simple_repeat 2 61 0 1694 164 32 69 chr18 29959615 29959993 -56028941 - MLT1B LTR MaLR -1 389 26 725 209 0 34 chr18 29959998 29960146 -56028788 + FLAM_C SINE Alu 1 143 0 30 83 0 0 chr18 29960174 29960246 -56028688 + AT_rich Low_complexity Low_complexity 1 72 0 199 311 92 53 chr18 29960565 29960640 -56028294 - L2 LINE L2 -2 3311 3240 2159 87 13 7 chr18 29960640 29960939 -56027995 - AluSg SINE Alu -9 301 1 199 311 92 53 chr18 29960939 29961069 -56027865 - L2 LINE L2 -73 3240 3098 290 377 20 1 chr18 29961314 29961480 -56027454 - MIR SINE MIR -51 157 31 1877 82 0 4 chr18 29962265 29962510 -56026424 - AluSg/x SINE Alu 0 312 69 1112 72 0 0 chr18 29962510 29962648 -56026286 - AluY SINE Alu -173 138 1 500 326 88 55 chr18 29962759 29963271 -56025663 + LTR67 LTR ERVL 27 555 -2 981 257 88 69 chr18 29963413 29963992 -56024942 + L2 LINE L2 2559 3142 -171 3400 197 36 24 chr18 29963994 29964831 -56024103 + L1 LINE L1 4160 5006 -1140 539 206 0 0 chr18 29964838 29964945 -56023989 - FLAM_C SINE Alu -36 107 1 228 35 0 0 chr18 29964946 29964975 -56023959 + (CA)n Simple_repeat Simple_repeat 2 30 0 240 35 0 0 chr18 29965017 29965046 -56023888 + (TG)n Simple_repeat Simple_repeat 2 30 0 216 189 0 19 chr18 29965088 29965141 -56023793 + (CAGAGA)n Simple_repeat Simple_repeat 6 57 0 187 362 0 0 chr18 29965141 29965199 -56023735 + L2 LINE L2 3235 3292 -21 556 283 75 64 chr18 29965432 29965793 -56023141 - HAL1 LINE L1 -2091 416 52 218 227 45 15 chr18 29966645 29966711 -56022223 + MIR SINE MIR 119 186 -76 255 260 58 39 chr18 29966720 29966824 -56022110 + MIR SINE MIR 127 232 -30 29 47 0 0 chr18 29967745 29967788 -56021146 + AT_rich Low_complexity Low_complexity 1 43 0 28 0 0 0 chr18 29969007 29969035 -56019899 + AT_rich Low_complexity Low_complexity 1 28 0 643 112 35 9 chr18 29970064 29970180 -56018754 - L1MB7 LINE L1 0 6184 6066 1544 203 70 65 chr18 29970548 29971006 -56017928 + MLT1C LTR MaLR 8 467 0 1764 193 99 18 chr18 29971273 29971667 -56017267 - MSTB LTR MaLR 0 426 1 618 219 79 0 chr18 29971849 29972036 -56016898 - MSTC LTR MaLR -179 217 1 801 186 14 22 chr18 29972821 29973178 -56015756 + CT-rich Low_complexity Low_complexity 1 354 0 261 135 0 54 chr18 29973164 29973238 -56015696 + (TCCC)n Simple_repeat Simple_repeat 3 72 0 * 200 108 0 27 chr18 29973236 29973273 -56015661 + (TTTC)n Simple_repeat Simple_repeat 3 38 0 * 204 121 0 52 chr18 29973295 29973353 -56015581 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 234 213 16 0 chr18 29973574 29973635 -56015299 + (TTATA)n Simple_repeat Simple_repeat 5 66 0 346 127 28 0 chr18 29973826 29973897 -56015037 + (TA)n Simple_repeat Simple_repeat 1 73 0 273 307 154 41 chr18 29973900 29974167 -56014767 + L1ME4a LINE L1 5393 5689 -432 294 284 0 0 chr18 29974372 29974460 -56014474 + L1ME4a LINE L1 5817 5904 -217 11365 225 40 8 chr18 29976409 29978813 -56010121 - ERVL-C2 LTR ERVL -3185 2579 97 649 198 96 145 chr18 29978892 29979365 -56009569 - MLT2C2 LTR ERVL -2 462 28 250 250 24 0 chr18 29979746 29979830 -56009104 - L1ME3A LINE L1 -235 5935 5850 768 220 0 33 chr18 29979832 29980014 -56008920 - AluJb SINE Alu 0 312 137 434 274 57 6 chr18 29980027 29980202 -56008732 - L1ME3A LINE L1 -331 5839 5656 742 250 7 0 chr18 29980213 29980357 -56008577 + Tigger3(Golem) DNA MER2_type 1 145 -2884 360 278 125 0 chr18 29980555 29980699 -56008235 - MER20B DNA MER1_type -371 412 251 1971 114 7 0 chr18 29981655 29981928 -56007006 + AluSc SINE Alu 31 305 -4 24 77 0 0 chr18 29982763 29982815 -56006119 + AT_rich Low_complexity Low_complexity 1 52 0 11769 165 49 23 chr18 29983560 29985915 -56003019 + Tigger1 DNA MER2_type 1 2417 -1 382 289 131 38 chr18 29986037 29986392 -56002542 - L1MC4a LINE L1 -158 5963 5571 183 315 33 22 chr18 29986923 29987015 -56001919 + L2 LINE L2 1851 1943 -1371 222 37 0 0 chr18 29987226 29987253 -56001681 + (GA)n Simple_repeat Simple_repeat 2 28 0 2142 172 46 0 chr18 29988736 29989126 -55999808 + Tigger3(Golem) DNA MER2_type 2616 3023 -6 355 289 41 0 chr18 29989134 29989255 -55999679 - L1ME3A LINE L1 -522 5640 5515 2138 132 3 0 chr18 29989877 29990202 -55998732 + AluSp SINE Alu 5 330 0 180 77 0 0 chr18 29990383 29990409 -55998525 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 25 31 0 0 chr18 29990917 29990949 -55997985 + AT_rich Low_complexity Low_complexity 1 32 0 248 287 88 23 chr18 29992868 29992981 -55995953 + MIR SINE MIR 17 122 -86 24 0 0 0 chr18 29993929 29993953 -55994981 + AT_rich Low_complexity Low_complexity 1 24 0 407 314 218 4 chr18 29994228 29994480 -55994454 + L2 LINE L2 3003 3308 -5 1427 194 46 7 chr18 29995701 29995985 -55992949 + AluJb SINE Alu 1 295 -17 566 224 34 67 chr18 29995986 29996165 -55992769 + MER90 LTR ERV1 3 175 -439 901 224 36 39 chr18 29996732 29997013 -55991921 + LTR4 LTR ERV1 317 596 0 1361 226 50 21 chr18 29997052 29997429 -55991505 + MER90 LTR ERV1 224 611 -3 26 30 0 0 chr18 29998569 29998602 -55990332 + AT_rich Low_complexity Low_complexity 1 33 0 4610 183 20 23 chr18 29998996 29999271 -55989663 - L1 LINE L1 -964 5182 4908 2417 73 0 0 chr18 29999271 29999572 -55989362 - AluY SINE Alu -10 301 1 4610 183 20 23 chr18 29999572 30000312 -55988622 - L1 LINE L1 -1238 4908 4170 * 5475 173 16 7 chr18 30000311 30001400 -55987534 + L1MA6 LINE L1 5192 6290 -10 22 56 0 0 chr18 30001470 30001506 -55987428 + AT_rich Low_complexity Low_complexity 1 36 0 505 275 92 58 chr18 30001825 30002402 -55986532 - L1MEc LINE L1 -4574 1822 1209 1947 110 4 0 chr18 30002402 30002666 -55986268 - AluSp SINE Alu -10 303 39 505 275 92 58 chr18 30002666 30002871 -55986063 - L1MEc LINE L1 -5187 1209 1013 1307 164 0 0 chr18 30002879 30003105 -55985829 - Tigger4(Zombi) DNA MER2_type 0 2731 2506 2013 214 83 26 chr18 30003105 30003685 -55985249 - LTR48B LTR ERV1 0 644 32 344 282 58 26 chr18 30005676 30005832 -55983102 - MER5B DNA MER1_type -13 165 5 269 282 32 53 chr18 30005885 30006008 -55982926 - MER5B DNA MER1_type -68 121 1 296 260 135 31 chr18 30006442 30006538 -55982396 + MER45 DNA AcHobo 3 108 -1473 224 368 68 16 chr18 30006548 30006798 -55982136 + L2 LINE L2 1894 2156 -1158 4388 98 65 6 chr18 30006990 30007640 -55981294 + LTR12 LTR ERV1 1 688 0 1727 176 7 3 chr18 30007664 30007966 -55980968 + AluSx SINE Alu 1 303 -9 222 374 89 8 chr18 30008049 30008172 -55980762 + L2 LINE L2 2567 2699 -615 385 273 55 27 chr18 30008232 30008452 -55980482 - MER20B DNA MER1_type -2 781 556 465 201 9 175 chr18 30008729 30008958 -55979976 + L2 LINE L2 3123 3313 0 220 310 28 0 chr18 30010143 30010214 -55978720 + MIR SINE MIR 29 101 -161 677 123 61 0 chr18 30010449 30010563 -55978371 - LTR54B LTR ERV1 -377 121 1 191 303 67 14 chr18 30010636 30010739 -55978195 + MIR SINE MIR 41 149 -59 189 0 0 0 chr18 30011125 30011146 -55977788 + (TC)n Simple_repeat Simple_repeat 2 22 0 22 0 0 0 chr18 30013469 30013491 -55975443 + AT_rich Low_complexity Low_complexity 1 22 0 1148 258 53 18 chr18 30013492 30014013 -55974921 - L1MEc LINE L1 -3682 2533 2039 1512 212 3 3 chr18 30014020 30014312 -55974622 - AluJo SINE Alu -20 292 1 637 285 96 8 chr18 30014473 30014838 -55974096 + L1M4c LINE L1 1023 1419 -4965 643 226 55 63 chr18 30014862 30015235 -55973699 - L1 LINE L1 -1688 4458 4137 390 297 56 62 chr18 30015232 30015730 -55973204 - L1MEc LINE L1 -4171 2225 1731 * 443 341 150 20 chr18 30015945 30016344 -55972590 + L3 LINE CR1 1027 1477 -100 1366 166 14 7 chr18 30016493 30016771 -55972163 + L1MA7 LINE L1 6012 6291 0 353 276 120 10 chr18 30017085 30017277 -55971657 + L1M4c LINE L1 2520 2732 -3650 247 330 11 0 chr18 30017288 30017379 -55971555 + L1ME1 LINE L1 6071 6162 -4 1650 219 85 41 chr18 30017866 30018350 -55970584 + MLT1D LTR MaLR 1 505 0 1329 243 117 23 chr18 30018498 30018968 -55969966 + HsTC2c DNA Tc2 216 729 0 21 0 0 0 chr18 30018995 30019016 -55969918 + AT_rich Low_complexity Low_complexity 1 21 0 2302 71 20 0 chr18 30019251 30019547 -55969387 + AluY SINE Alu 1 302 -9 22 88 0 0 chr18 30021553 30021610 -55967324 + AT_rich Low_complexity Low_complexity 1 57 0 1677 255 87 37 chr18 30021632 30022228 -55966706 + MLT1E2 LTR MaLR 1 626 0 375 234 60 93 chr18 30022354 30022567 -55966367 + MLT1E2 LTR MaLR 137 290 -336 21 57 0 0 chr18 30023263 30023298 -55965636 + AT_rich Low_complexity Low_complexity 1 35 0 268 363 106 11 chr18 30024806 30025079 -55963855 + L2 LINE L2 2557 2855 -459 202 360 0 0 chr18 30025652 30025727 -55963207 - MIR SINE MIR -1 261 187 29 70 0 0 chr18 30026002 30026059 -55962875 + AT_rich Low_complexity Low_complexity 1 57 0 24 32 0 0 chr18 30026589 30026620 -55962314 + AT_rich Low_complexity Low_complexity 1 31 0 742 283 74 37 chr18 30027138 30027553 -55961381 + LTR33 LTR ERVL 7 514 -7 4660 35 5 2 chr18 30027861 30028428 -55960506 - L1PA5 LINE L1 -2 6152 5584 630 286 0 6 chr18 30029530 30029701 -55959233 - MER5B DNA MER1_type 0 178 9 5116 184 214 74 chr18 30030055 30031594 -55957340 + MER52A LTR ERV1 1 1755 0 530 333 94 32 chr18 30031610 30031874 -55957060 + ERVL LTR ERVL 1953 2240 -3524 2050 149 34 8 chr18 30031874 30032229 -55956705 - THE1B LTR MaLR 0 364 1 530 333 94 32 chr18 30032229 30032273 -55956661 + ERVL LTR ERVL 2240 2280 -3484 626 330 66 15 chr18 30032645 30032867 -55956067 + ERVL LTR ERVL 2950 3196 -2568 1365 209 82 3 chr18 30032867 30033182 -55955752 + MER58B DNA MER1_type 2 341 0 626 330 66 15 chr18 30033182 30033292 -55955642 + ERVL LTR ERVL 3196 3299 -2465 1212 330 84 44 chr18 30033457 30033828 -55955106 + ERVL LTR ERVL 3388 3743 -2021 2027 143 0 7 chr18 30033828 30034129 -55954805 + AluSx SINE Alu 6 304 -8 1212 330 84 44 chr18 30034129 30034778 -55954156 + ERVL LTR ERVL 3743 4449 -1315 1910 179 23 55 chr18 30034781 30035216 -55953718 - MSTC LTR MaLR -7 421 1 555 328 48 67 chr18 30035263 30035699 -55953235 + ERVL LTR ERVL 4457 4884 -770 318 369 12 12 chr18 30035929 30036097 -55952837 + ERVL LTR ERVL 5169 5336 -428 1085 291 111 30 chr18 30036332 30036793 -55952141 + LTR33 LTR ERVL 1 498 -23 215 98 0 49 chr18 30037286 30037327 -55951607 + (TAAAAA)n Simple_repeat Simple_repeat 3 41 0 23 0 0 0 chr18 30037811 30037834 -55951100 + AT_rich Low_complexity Low_complexity 1 23 0 430 224 121 46 chr18 30038334 30038508 -55950426 + MER53 DNA DNA 1 187 -2 216 200 0 0 chr18 30038869 30038919 -55950015 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 26 0 0 0 chr18 30039195 30039221 -55949713 + AT_rich Low_complexity Low_complexity 1 26 0 473 342 64 24 chr18 30039266 30039561 -55949373 + L2 LINE L2 3002 3308 -5 244 228 38 25 chr18 30039882 30039961 -55948973 + L1ME3A LINE L1 1875 1954 -4442 367 221 0 0 chr18 30040320 30040388 -55948546 + AluJb SINE Alu 49 116 -186 245 50 0 25 chr18 30040391 30040431 -55948503 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 323 290 73 56 chr18 30040461 30040802 -55948132 + L1ME3A LINE L1 2329 2675 -3540 848 307 95 39 chr18 30041000 30041988 -55946946 + L1ME3A LINE L1 3623 4666 -1549 1714 295 86 20 chr18 30041996 30042847 -55946087 + L1ME3A LINE L1 5324 6230 -9 1643 210 6 9 chr18 30043302 30043621 -55945313 - MLT1A1 LTR MaLR 0 365 48 333 283 182 13 chr18 30044095 30044254 -55944680 - MIR SINE MIR -75 187 2 23 0 0 0 chr18 30044508 30044531 -55944403 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr18 30044903 30044933 -55944001 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr18 30045511 30045532 -55943402 + AT_rich Low_complexity Low_complexity 1 21 0 392 314 85 25 chr18 30045711 30045947 -55942987 - MIR SINE MIR 0 262 13 212 264 0 0 chr18 30046165 30046218 -55942716 + MIR SINE MIR 101 153 -109 230 301 41 0 chr18 30046221 30046294 -55942640 + L1M4c LINE L1 1524 1599 -4785 23 0 0 0 chr18 30046303 30046326 -55942608 + AT_rich Low_complexity Low_complexity 1 23 0 1550 205 7 3 chr18 30047045 30047342 -55941592 - AluJb SINE Alu -14 298 1 2442 247 131 39 chr18 30047677 30048809 -55940125 - L1MD3 LINE L1 -2 8038 6825 1070 165 97 11 chr18 30048810 30049149 -55939785 - LTR47A LTR ERVL 0 452 1 1994 268 133 43 chr18 30049220 30050339 -55938595 - L1MC4a LINE L1 -1190 6618 5399 1203 252 127 26 chr18 30050362 30050904 -55938030 + L2 LINE L2 2474 3060 -253 814 118 21 28 chr18 30051484 30051628 -55937306 + MER30 DNA MER1_type 2 144 -86 9867 112 13 3 chr18 30051642 30053880 -55935054 - L1PA8A LINE L1 -20 6111 3859 734 144 0 0 chr18 30053880 30053984 -55934950 + MER30 DNA MER1_type 127 230 0 273 308 43 52 chr18 30054098 30054294 -55934640 - L1MC4a LINE L1 -1306 4840 4647 1324 227 7 20 chr18 30054294 30054598 -55934336 - AluJo SINE Alu -2 300 1 273 308 43 52 chr18 30054598 30054729 -55934205 - L1MC4a LINE L1 -1499 4647 4516 22 0 0 0 chr18 30055861 30055883 -55933051 + AT_rich Low_complexity Low_complexity 1 22 0 781 203 25 13 chr18 30056109 30056267 -55932667 + MER5B DNA MER1_type 2 161 -17 212 342 13 13 chr18 30056470 30056549 -55932385 - L2 LINE L2 -3 3269 3191 1920 193 18 26 chr18 30058014 30058403 -55930531 + LTR32 LTR ERVL 15 400 -71 32 75 0 0 chr18 30058621 30058688 -55930246 + AT_rich Low_complexity Low_complexity 1 67 0 233 266 86 22 chr18 30058693 30058832 -55930102 + L1M4 LINE L1 5219 5366 -780 1809 144 64 34 chr18 30058838 30059260 -55929674 + MER51B LTR ERV1 1 377 0 198 71 0 0 chr18 30060128 30060156 -55928778 + (TAA)n Simple_repeat Simple_repeat 2 29 0 438 323 25 19 chr18 30060944 30061105 -55927829 - MIR SINE MIR -36 226 65 221 316 111 34 chr18 30062592 30062709 -55926225 + MIR SINE MIR 110 235 -27 461 293 116 34 chr18 30063031 30063444 -55925490 + L1ME LINE L1 4942 5388 -758 279 314 41 26 chr18 30063679 30063873 -55925061 + L1ME LINE L1 5629 5825 -296 * 848 197 70 14 chr18 30063867 30063905 -55925029 + L1MA3 LINE L1 6080 6114 -191 1583 189 3 14 chr18 30063905 30064219 -55924715 - AluJo SINE Alu 0 311 1 848 197 70 14 chr18 30064219 30064392 -55924542 + L1MA3 LINE L1 6114 6304 -1 2573 215 11 4 chr18 30064926 30065448 -55923486 - MER44D DNA MER2_type -1 604 24 551 330 34 0 chr18 30065548 30065727 -55923207 - MER5A DNA MER1_type -1 188 4 239 271 34 0 chr18 30066307 30066366 -55922568 - LTR67 LTR ERVL 0 557 497 407 258 46 53 chr18 30067190 30067341 -55921593 - MLT1L LTR MaLR 0 615 466 264 309 127 18 chr18 30067491 30067656 -55921278 - MLT1L LTR MaLR -418 197 15 432 293 66 6 chr18 30067880 30068047 -55920887 - MIR SINE MIR -12 250 74 2324 85 0 3 chr18 30068097 30068402 -55920532 - AluSq SINE Alu -7 306 3 23 0 0 0 chr18 30068580 30068603 -55920331 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr18 30069099 30069123 -55919811 + AT_rich Low_complexity Low_complexity 1 24 0 333 0 0 0 chr18 30070097 30070134 -55918800 + (TG)n Simple_repeat Simple_repeat 2 38 0 187 54 54 0 chr18 30070133 30070170 -55918764 + T-rich Low_complexity Low_complexity 5 43 0 * 1475 59 0 0 chr18 30070170 30070357 -55918577 - L1PA5 LINE L1 -18 6136 5950 742 43 0 0 chr18 30070357 30070449 -55918485 + L1PA5 LINE L1 5857 5948 -206 347 291 68 34 chr18 30070746 30070952 -55917982 - L1MEd LINE L1 -3757 2372 2160 313 355 114 0 chr18 30071504 30071670 -55917264 - HAL1 LINE L1 -864 1643 1459 1260 157 59 0 chr18 30071852 30071997 -55916937 - L1MA9 LINE L1 0 6312 6146 297 0 0 0 chr18 30071997 30072030 -55916904 + (TG)n Simple_repeat Simple_repeat 2 34 0 1260 157 59 0 chr18 30072030 30072120 -55916814 - L1MA9 LINE L1 -166 6146 6063 815 331 72 25 chr18 30072121 30072720 -55916214 - L1MEd LINE L1 -5055 1064 438 507 33 0 0 chr18 30073981 30074042 -55914892 + (GAAAA)n Simple_repeat Simple_repeat 3 63 0 985 259 40 29 chr18 30074042 30074389 -55914545 + HsTC2 DNA Tc2 1189 1715 -183 25 90 0 0 chr18 30074389 30074456 -55914478 + AT_rich Low_complexity Low_complexity 1 67 0 48 53 0 0 chr18 30074613 30074689 -55914245 + AT_rich Low_complexity Low_complexity 1 76 0 703 342 58 27 chr18 30074835 30075349 -55913585 - HAL1 LINE L1 -595 1912 1383 3298 182 18 2 chr18 30075414 30076014 -55912920 - Tigger1 DNA MER2_type -2 2416 1807 1407 206 7 14 chr18 30076040 30076326 -55912608 - Tigger1 DNA MER2_type -848 1570 1287 * 5077 168 13 3 chr18 30076296 30077155 -55911779 - Tigger1 DNA MER2_type -1551 867 1 3946 98 1 58 chr18 30077681 30078331 -55910603 - L1PB1 LINE L1 -2 6149 5537 1500 217 14 31 chr18 30078332 30078388 -55910546 + L1P LINE L1 3284 3339 -2807 2128 84 3 53 chr18 30078388 30078709 -55910225 + AluY SINE Alu 3 307 -4 1500 217 14 31 chr18 30078709 30079071 -55909863 + L1P LINE L1 3339 3695 -2451 303 317 32 16 chr18 30079075 30079198 -55909736 - HAL1 LINE L1 -1810 697 573 320 370 57 35 chr18 30079230 30079457 -55909477 - HAL1 LINE L1 -2040 467 236 3009 322 107 22 chr18 30079526 30081449 -55907485 - L2 LINE L2 -1 3312 1221 434 263 72 57 chr18 30082226 30082420 -55906514 + L2 LINE L2 3117 3313 0 244 316 13 13 chr18 30082492 30082571 -55906363 + L3 LINE CR1 1488 1566 -11 205 307 70 9 chr18 30082575 30082689 -55906245 + MIR3 SINE MIR 84 204 -4 751 280 78 38 chr18 30083711 30084056 -55904878 - MLT1J LTR MaLR -148 326 1 1968 117 14 0 chr18 30084848 30085138 -55903796 + AluSg SINE Alu 1 294 -16 517 330 129 18 chr18 30085751 30086030 -55902904 + L1MC4 LINE L1 6703 7012 -1030 267 31 0 0 chr18 30086182 30086214 -55902720 + (CA)n Simple_repeat Simple_repeat 2 33 0 770 135 0 0 chr18 30086214 30086325 -55902609 - FLAM_C SINE Alu -21 122 12 487 276 113 29 chr18 30086481 30086792 -55902142 + L1MC4 LINE L1 7094 7430 -612 378 263 69 53 chr18 30086960 30087207 -55901727 + L1MC5 LINE L1 7469 7719 -242 443 339 112 18 chr18 30087740 30088176 -55900758 + L1M4 LINE L1 4518 4994 -1152 24 0 0 0 chr18 30088251 30088275 -55900659 + AT_rich Low_complexity Low_complexity 1 24 0 216 200 0 0 chr18 30088353 30088398 -55900536 + (TA)n Simple_repeat Simple_repeat 1 45 0 649 229 0 0 chr18 30088504 30088626 -55900308 - FLAM_C SINE Alu -16 127 6 22 56 0 0 chr18 30089342 30089378 -55899556 + AT_rich Low_complexity Low_complexity 1 36 0 210 174 0 22 chr18 30089394 30089440 -55899494 + (TGAA)n Simple_repeat Simple_repeat 2 46 0 1796 162 0 10 chr18 30089992 30090289 -55898645 + AluSx SINE Alu 1 294 -18 757 277 71 40 chr18 30090961 30091315 -55897619 - LTR16A LTR ERVL 0 450 86 26 50 0 0 chr18 30091425 30091465 -55897469 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr18 30091830 30091853 -55897081 + AT_rich Low_complexity Low_complexity 1 23 0 2323 75 10 0 chr18 30092014 30092320 -55896614 - AluY SINE Alu -2 309 1 1975 283 39 4 chr18 30092998 30093559 -55895375 + MLT1G LTR MaLR 8 588 -2 1950 96 14 45 chr18 30094127 30094419 -55894515 + AluSc SINE Alu 27 309 0 186 43 0 0 chr18 30096080 30096103 -55892831 + (CA)n Simple_repeat Simple_repeat 2 24 0 213 361 56 47 chr18 30096260 30096601 -55892333 - L2 LINE L2 -47 3266 2923 261 261 0 33 chr18 30097324 30097416 -55891518 + CT-rich Low_complexity Low_complexity 2 90 0 233 350 21 0 chr18 30097813 30097910 -55891024 - L2 LINE L2 -2903 411 313 367 274 50 81 chr18 30098463 30098722 -55890212 - L1MC4a LINE L1 -1822 5986 5736 284 271 75 45 chr18 30098723 30098856 -55890078 - L2 LINE L2 0 3313 3177 330 370 154 0 chr18 30098870 30099078 -55889856 - L2 LINE L2 -365 2949 2710 438 349 42 9 chr18 30099078 30099290 -55889644 - L1MC4a LINE L1 -2078 5730 5512 665 197 0 0 chr18 30099381 30099498 -55889436 - FLAM_C SINE Alu -15 118 2 241 365 44 39 chr18 30100005 30100208 -55888726 - L2 LINE L2 -2107 1207 1004 1905 186 41 23 chr18 30100340 30100775 -55888159 - L1MA8 LINE L1 -12 6279 5837 302 159 14 0 chr18 30101540 30101609 -55887325 + CT-rich Low_complexity Low_complexity 1 70 0 614 238 54 5 chr18 30302961 30303146 -55685788 + Charlie2a DNA MER1_type 1755 1948 -914 824 279 98 57 chr18 30303146 30303706 -55685228 + L1MDa LINE L1 16 598 -5942 685 257 35 15 chr18 30304279 30304540 -55684394 + L1MDa LINE L1 989 1254 -5289 2036 230 82 9 chr18 30304540 30305201 -55683733 + Charlie2a DNA MER1_type 1931 2639 -223 636 205 8 0 chr18 30305206 30305333 -55683601 + L1 LINE L1 3586 3713 -2433 346 260 73 7 chr18 30305333 30305483 -55683451 + Charlie2a DNA MER1_type 2622 2781 -81 246 311 0 22 chr18 30305631 30305721 -55683213 + GA-rich Low_complexity Low_complexity 1 88 0 451 295 166 5 chr18 30305724 30305941 -55682993 - MIR SINE MIR 0 262 11 235 354 137 36 chr18 30305923 30306200 -55682734 - L2 LINE L2 -38 3275 2971 * 4057 152 66 24 chr18 30307268 30308058 -55680876 + LTR1B LTR ERV1 3 825 -1 23 33 0 0 chr18 30309555 30309585 -55679349 + AT_rich Low_complexity Low_complexity 1 30 0 24 53 0 0 chr18 30309978 30310016 -55678918 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr18 30310410 30310434 -55678500 + AT_rich Low_complexity Low_complexity 1 24 0 379 113 28 0 chr18 30310519 30310590 -55678344 + (TA)n Simple_repeat Simple_repeat 1 73 0 249 307 154 41 chr18 30310593 30310860 -55678074 + L1ME4a LINE L1 5393 5689 -432 282 284 0 0 chr18 30311065 30311153 -55677781 + L1ME4a LINE L1 5817 5904 -217 11340 225 37 3 chr18 30313102 30315431 -55673503 - ERVL-C2 LTR ERVL -3185 2579 172 648 197 96 144 chr18 30315585 30316058 -55672876 - MLT2C2 LTR ERVL -2 462 28 240 250 24 0 chr18 30316439 30316523 -55672411 - L1ME3A LINE L1 -235 6171 6086 812 221 0 28 chr18 30316525 30316706 -55672228 - AluJb SINE Alu 0 312 137 422 274 57 6 chr18 30316719 30316894 -55672040 - L1ME3A LINE L1 -331 6075 5892 5166 161 56 10 chr18 30316905 30318040 -55670894 + Tigger3b DNA MER2_type 1 1225 -6 348 289 41 0 chr18 30318048 30318169 -55670765 - L1ME3A LINE L1 -522 5876 5751 2164 132 3 0 chr18 30318791 30319116 -55669818 + AluSp SINE Alu 5 330 0 180 77 0 0 chr18 30319297 30319323 -55669611 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 25 31 0 0 chr18 30319831 30319863 -55669071 + AT_rich Low_complexity Low_complexity 1 32 0 254 287 88 23 chr18 30321782 30321895 -55667039 + MIR SINE MIR 17 122 -86 24 0 0 0 chr18 30322843 30322867 -55666067 + AT_rich Low_complexity Low_complexity 1 24 0 398 314 218 4 chr18 30323142 30323394 -55665540 + L2 LINE L2 3003 3308 -5 1451 194 46 7 chr18 30324615 30324899 -55664035 + AluJb SINE Alu 1 295 -17 571 224 34 67 chr18 30324900 30325079 -55663855 + MER90 LTR ERV1 3 175 -439 912 224 36 39 chr18 30325646 30325927 -55663007 + LTR4 LTR ERV1 317 596 0 1359 226 50 21 chr18 30325966 30326343 -55662591 + MER90 LTR ERV1 224 611 -3 26 30 0 0 chr18 30327483 30327516 -55661418 + AT_rich Low_complexity Low_complexity 1 33 0 2573 213 27 60 chr18 30327904 30328185 -55660749 - L1ME3A LINE L1 -946 5436 5147 2453 73 0 0 chr18 30328185 30328486 -55660448 - AluY SINE Alu -10 301 1 2573 213 27 60 chr18 30328486 30329321 -55659613 - L1ME3A LINE L1 -1235 5147 4406 * 5418 173 16 7 chr18 30329320 30330409 -55658525 + L1MA6 LINE L1 5192 6290 -10 22 56 0 0 chr18 30330479 30330515 -55658419 + AT_rich Low_complexity Low_complexity 1 36 0 418 275 92 58 chr18 30330834 30331411 -55657523 - L1M4c LINE L1 -4549 1833 1241 1970 110 4 0 chr18 30331411 30331675 -55657259 - AluSp SINE Alu -10 303 39 418 275 92 58 chr18 30331675 30331880 -55657054 - L1M4c LINE L1 -5141 1241 1045 1290 164 0 0 chr18 30331888 30332114 -55656820 - Tigger4(Zombi) DNA MER2_type 0 2731 2506 2016 214 83 26 chr18 30332114 30332694 -55656240 - LTR48B LTR ERV1 0 644 32 490 237 53 23 chr18 30334710 30334841 -55654093 + MER5B DNA MER1_type 40 174 -4 267 282 32 53 chr18 30334894 30335017 -55653917 - MER5B DNA MER1_type -68 121 1 295 260 135 31 chr18 30335451 30335547 -55653387 + MER45 DNA AcHobo 3 108 -932 226 368 68 16 chr18 30335557 30335807 -55653127 + L2 LINE L2 1894 2156 -1158 284 377 20 1 chr18 30336593 30336759 -55652175 + MIR SINE MIR 31 199 -51 184 311 92 53 chr18 30337004 30337134 -55651800 + L2 LINE L2 3098 3240 -73 2194 87 13 7 chr18 30337134 30337433 -55651501 + AluSg SINE Alu 1 301 -9 184 311 92 53 chr18 30337433 30337508 -55651426 + L2 LINE L2 3240 3311 -2 30 83 0 0 chr18 30337827 30337899 -55651035 + AT_rich Low_complexity Low_complexity 1 72 0 731 209 0 34 chr18 30337927 30338075 -55650859 - FLAM_C SINE Alu 0 143 1 1692 163 32 69 chr18 30338080 30338455 -55650479 + MLT1B LTR MaLR 26 386 -4 248 252 135 9 chr18 30338859 30338970 -55649964 - L2 LINE L2 -9 3263 3139 2004 99 7 0 chr18 30339464 30339748 -55649186 - L1P4 LINE L1 -558 5607 5322 1455 117 0 0 chr18 30339748 30339944 -55648990 - AluSg/x SINE Alu -17 293 98 456 167 31 0 chr18 30340048 30340144 -55648790 - L1PBa LINE L1 -6671 192 94 2318 100 47 33 chr18 30340144 30340503 -55648431 + THE1B LTR MaLR 1 364 0 983 64 28 0 chr18 30340503 30340644 -55648290 + THE1B-int LTR MaLR 1 145 -1435 29 47 0 0 chr18 30340801 30340844 -55648090 + AT_rich Low_complexity Low_complexity 1 43 0 760 295 70 4 chr18 30341077 30341580 -55647354 + MER69 DNA AcHobo 134 766 -460 1369 204 3 78 chr18 30341680 30342014 -55646920 + L1MD2 LINE L1 6031 6339 -20 220 369 39 0 chr18 30342052 30342155 -55646779 - L2 LINE L2 -656 2658 2552 303 67 0 0 chr18 30342582 30342627 -55646307 - MADE1 DNA Mariner -35 45 1 1428 252 23 2 chr18 30342634 30343074 -55645860 - L1 LINE L1 -2494 3652 3204 221 57 29 0 chr18 30343877 30343912 -55645022 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 393 22 0 0 chr18 30344046 30344092 -55644842 + (CTAAT)n Simple_repeat Simple_repeat 4 49 0 1585 200 17 10 chr18 30344772 30345067 -55643867 + L1PBa LINE L1 20 316 -6547 3220 142 34 4 chr18 30345171 30345707 -55643227 + L1PBa LINE L1 906 1457 -5406 182 190 0 17 chr18 30346379 30346437 -55642497 + GA-rich Low_complexity Low_complexity 4 60 0 2389 85 0 0 chr18 30346870 30347165 -55641769 - AluSg SINE Alu -15 295 1 2085 103 3 10 chr18 30347359 30347649 -55641285 + AluSq SINE Alu 1 288 -25 24 0 0 0 chr18 30347766 30347790 -55641144 + AT_rich Low_complexity Low_complexity 1 24 0 383 43 57 0 chr18 30351063 30351133 -55637801 + (TAGA)n Simple_repeat Simple_repeat 3 76 0 2403 104 0 19 chr18 30351134 30351499 -55637435 + L1PB1 LINE L1 5794 6151 0 1438 249 78 22 chr18 30351503 30352125 -55636809 + L1MDa LINE L1 75 807 -5733 491 118 0 0 chr18 30352228 30352296 -55636638 + Alu SINE Alu 182 249 -62 1235 101 14 46 chr18 30352296 30352514 -55636420 + AluSg/x SINE Alu 83 293 -17 769 258 114 54 chr18 30352805 30353371 -55635563 - MLT1F1 LTR MaLR -2 593 14 2365 94 0 16 chr18 30353719 30354026 -55634908 - AluSg SINE Alu -7 303 2 1962 130 4 0 chr18 30354737 30355013 -55633921 - AluSx SINE Alu -35 277 1 2744 91 7 17 chr18 30355255 30355672 -55633262 - L1PBa LINE L1 -5814 1049 637 1079 141 22 0 chr18 30355673 30355857 -55633077 - L1PBa LINE L1 -6675 188 1 455 163 130 24 chr18 30355922 30356045 -55632889 + MLT1A1 LTR MaLR 1 136 -229 716 313 70 9 chr18 30356160 30356502 -55632432 - L1M2a LINE L1 -5190 1978 1616 368 341 26 49 chr18 30356795 30357062 -55631872 - L1M2a LINE L1 -5710 1388 1128 2766 264 24 14 chr18 30357163 30358175 -55630759 + L1 LINE L1 2172 3193 -2953 785 111 0 8 chr18 30358195 30358321 -55630613 - L1MA2 LINE L1 0 6304 6180 2390 85 3 0 chr18 30358908 30359202 -55629732 - AluSg SINE Alu -14 296 2 22 0 0 0 chr18 30359528 30359550 -55629384 + AT_rich Low_complexity Low_complexity 1 22 0 1369 104 0 0 chr18 30359680 30359863 -55629071 + AluY SINE Alu 127 309 -2 2146 103 0 0 chr18 30359865 30360177 -55628757 + THE1B-int LTR MaLR 1269 1580 0 1787 157 53 36 chr18 30360179 30360535 -55628399 + THE1B LTR MaLR 3 364 0 596 96 32 0 chr18 30360535 30360629 -55628305 - L1PBa LINE L1 -6765 98 2 2169 109 3 0 chr18 30361324 30361646 -55627288 + AluSg SINE Alu 1 323 0 234 305 95 39 chr18 30361964 30362374 -55626560 - L2 LINE L2 -215 3057 2624 367 309 24 0 chr18 30362390 30362513 -55626421 - MIR SINE MIR -7 255 130 1444 245 105 9 chr18 30362659 30362965 -55625969 + MLT1F LTR MaLR 1 361 -181 2289 115 3 3 chr18 30362965 30363278 -55625656 + AluSq SINE Alu 1 313 0 1444 245 105 9 chr18 30363278 30363400 -55625534 + MLT1F LTR MaLR 361 470 -72 427 284 57 21 chr18 30363508 30363649 -55625285 + L2 LINE L2 3168 3313 0 302 309 24 0 chr18 30363652 30363736 -55625198 - MIR SINE MIR -157 105 20 1663 130 4 0 chr18 30363849 30364096 -55624838 + AluSp SINE Alu 1 248 -65 2215 107 57 28 chr18 30364211 30364565 -55624369 - THE1B LTR MaLR 0 364 1 6915 112 14 1 chr18 30364565 30365583 -55623351 - THE1B-int LTR MaLR 0 1580 550 947 208 0 0 chr18 30365733 30365892 -55623042 - FRAM SINE Alu -7 159 1 6150 90 12 3 chr18 30366837 30368062 -55620872 + L1PB1 LINE L1 4916 6149 -2 1251 214 24 12 chr18 30368134 30368470 -55620464 + L1 LINE L1 3178 3517 -2629 183 121 0 30 chr18 30368675 30368708 -55620226 - L2 LINE L2 -968 2346 2315 1133 179 5 0 chr18 30369086 30369270 -55619664 + AluSg1 SINE Alu 1 185 -124 596 100 0 0 chr18 30369271 30369351 -55619583 + AluSg1 SINE Alu 54 133 -176 2351 78 0 7 chr18 30369351 30369657 -55619277 + AluY SINE Alu 1 304 -7 1774 184 21 53 chr18 30370077 30370512 -55618422 + MSTC LTR MaLR 1 421 -7 1381 334 85 65 chr18 30370591 30371164 -55617770 - ERVL LTR ERVL -1393 4371 3811 2083 150 0 7 chr18 30371164 30371470 -55617464 - AluSx SINE Alu -8 304 1 1381 334 85 65 chr18 30371470 30372111 -55616823 - ERVL LTR ERVL -1953 3811 3184 1342 209 82 3 chr18 30372111 30372426 -55616508 - MER58B DNA MER1_type 0 341 2 1381 334 85 65 chr18 30372426 30373316 -55615618 - ERVL LTR ERVL -2580 3184 2210 2071 149 34 8 chr18 30373316 30373671 -55615263 + THE1B LTR MaLR 1 364 0 1381 334 85 65 chr18 30373671 30373935 -55614999 - ERVL LTR ERVL -3554 2210 1953 4769 184 214 74 chr18 30373951 30375490 -55613444 - MER52A LTR ERV1 0 1755 1 647 281 6 12 chr18 30375844 30376015 -55612919 + MER5B DNA MER1_type 9 178 0 4694 35 5 2 chr18 30377117 30377684 -55611250 + L1PA5 LINE L1 5584 6152 -2 651 277 76 38 chr18 30377992 30378407 -55610527 - LTR33 LTR ERVL -7 514 7 24 32 0 0 chr18 30378925 30378956 -55609978 + AT_rich Low_complexity Low_complexity 1 31 0 29 70 0 0 chr18 30379486 30379543 -55609391 + AT_rich Low_complexity Low_complexity 1 57 0 192 360 0 0 chr18 30379818 30379893 -55609041 + MIR SINE MIR 187 261 -1 252 363 106 11 chr18 30380466 30380739 -55608195 - L2 LINE L2 -459 2855 2557 21 57 0 0 chr18 30382247 30382282 -55606652 + AT_rich Low_complexity Low_complexity 1 35 0 336 201 89 121 chr18 30382978 30383191 -55605743 - MLT1E2 LTR MaLR -336 312 137 1677 247 91 40 chr18 30383317 30383913 -55605021 - MLT1E2 LTR MaLR 0 626 1 22 88 0 0 chr18 30383935 30383992 -55604942 + AT_rich Low_complexity Low_complexity 1 57 0 2347 71 20 0 chr18 30385998 30386294 -55602640 - AluY SINE Alu -9 302 1 21 0 0 0 chr18 30386529 30386550 -55602384 + AT_rich Low_complexity Low_complexity 1 21 0 1165 243 117 23 chr18 30386577 30387047 -55601887 - HsTC2c DNA Tc2 0 729 216 1628 215 87 43 chr18 30387195 30387679 -55601255 - MLT1D LTR MaLR 0 505 1 290 276 120 10 chr18 30388268 30388460 -55600474 - L1M4 LINE L1 -3650 2732 2520 1310 166 14 7 chr18 30388774 30389052 -55599882 - L1MA7 LINE L1 0 6291 6012 402 341 150 20 chr18 30389201 30389600 -55599334 - L3 LINE CR1 -100 1477 1027 228 297 56 62 chr18 30389815 30390313 -55598621 + L1MEc LINE L1 1731 2225 -4171 * 549 212 47 26 chr18 30390310 30390683 -55598251 + L1M4 LINE L1 4137 4458 -1688 515 285 96 8 chr18 30390707 30391072 -55597862 - L1M4 LINE L1 -4965 1419 1023 1568 212 3 3 chr18 30391233 30391525 -55597409 + AluJo SINE Alu 1 292 -20 1029 257 53 19 chr18 30391532 30392051 -55596883 + L1MEc LINE L1 2039 2531 -3684 22 0 0 0 chr18 30392054 30392076 -55596858 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr18 30394399 30394420 -55594514 + (GA)n Simple_repeat Simple_repeat 2 22 0 189 303 67 14 chr18 30394806 30394909 -55594025 - MIR SINE MIR -59 149 41 639 123 61 0 chr18 30394982 30395096 -55593838 + LTR54B LTR ERV1 1 121 -377 225 310 28 0 chr18 30395331 30395402 -55593532 - MIR SINE MIR -161 101 29 470 201 9 175 chr18 30396588 30396817 -55592117 - L2 LINE L2 0 3313 3123 280 377 20 1 chr18 30398158 30398324 -55590610 + MIR SINE MIR 31 199 -51 2150 87 17 7 chr18 30398700 30398998 -55589936 + AluSg SINE Alu 1 301 -9 180 255 21 0 chr18 30399017 30399064 -55589870 + MIR SINE MIR 206 253 -9 30 83 0 0 chr18 30399392 30399464 -55589470 + AT_rich Low_complexity Low_complexity 1 72 0 731 209 0 34 chr18 30399492 30399640 -55589294 - FLAM_C SINE Alu 0 143 1 1581 167 32 69 chr18 30399645 30400023 -55588911 + MLT1B LTR MaLR 26 389 -1 420 67 0 0 chr18 30400033 30400093 -55588841 + (TA)n Simple_repeat Simple_repeat 2 61 0 2166 118 0 3 chr18 30400129 30400425 -55588509 - AluSc SINE Alu -14 295 1 491 273 32 43 chr18 30400435 30400688 -55588246 - HAL1 LINE L1 -33 2474 2225 672 296 28 31 chr18 30402153 30402278 -55586656 + ERVL LTR ERVL 2177 2301 -3463 1797 187 33 0 chr18 30402278 30402615 -55586319 + MER7A DNA MER2_type 1 346 0 672 296 28 31 chr18 30402615 30402776 -55586158 + ERVL LTR ERVL 2301 2462 -3302 1226 210 74 27 chr18 30402814 30403152 -55585782 - MLT1A1 LTR MaLR -2 363 10 364 323 10 0 chr18 30403405 30403504 -55585430 + MER58 DNA MER1_type 2 101 -114 321 68 0 0 chr18 30403509 30403553 -55585381 + (CA)n Simple_repeat Simple_repeat 1 44 0 1918 82 0 4 chr18 30403986 30404231 -55584703 - AluSg/x SINE Alu 0 312 69 1133 72 0 0 chr18 30404231 30404369 -55584565 - AluY SINE Alu -173 138 2 504 320 86 53 chr18 30404480 30404992 -55583942 + LTR67 LTR ERVL 27 555 -2 981 256 84 74 chr18 30405134 30405718 -55583216 + L2 LINE L2 2559 3142 -171 3410 196 36 24 chr18 30405720 30406557 -55582377 + L1 LINE L1 4160 5006 -1140 539 206 0 0 chr18 30406564 30406671 -55582263 - FLAM_C SINE Alu -36 107 1 228 35 0 0 chr18 30406672 30406701 -55582233 + (CA)n Simple_repeat Simple_repeat 2 30 0 240 35 0 0 chr18 30406743 30406772 -55582162 + (TG)n Simple_repeat Simple_repeat 2 30 0 216 189 0 19 chr18 30406814 30406867 -55582067 + (CAGAGA)n Simple_repeat Simple_repeat 6 57 0 187 362 0 0 chr18 30406867 30406925 -55582009 + L2 LINE L2 3235 3292 -21 556 283 75 64 chr18 30407158 30407519 -55581415 - HAL1 LINE L1 -2091 416 52 263 339 121 0 chr18 30409159 30409283 -55579651 - MIR SINE MIR -5 257 119 4063 150 41 80 chr18 30409300 30410125 -55578809 - L1PB4 LINE L1 -5 6151 5369 1340 80 10 40 chr18 30410125 30410325 -55578609 - L1PA10 LINE L1 -9 6159 5966 4063 150 41 80 chr18 30410325 30410518 -55578416 - L1PB4 LINE L1 -787 5369 5170 345 85 0 0 chr18 30410518 30410565 -55578369 - Alu SINE Alu -252 47 1 22 80 0 0 chr18 30410751 30410801 -55578133 + AT_rich Low_complexity Low_complexity 1 50 0 328 296 61 0 chr18 30410967 30411065 -55577869 - MIR SINE MIR 0 262 159 * 361 339 0 8 chr18 30411062 30411183 -55577751 + L2 LINE L2 3192 3311 -2 282 302 71 8 chr18 30411191 30411317 -55577617 - MIR SINE MIR -108 154 21 943 219 111 51 chr18 30412107 30412422 -55576512 + MLT2C1 LTR ERVL 5 338 -59 196 176 29 0 chr18 30412425 30412493 -55576441 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 1164 203 126 31 chr18 30414483 30414833 -55574101 + LTR52 LTR ERVL 1 383 -38 1918 139 21 77 chr18 30414836 30415039 -55573895 + MLT2D LTR ERVL 1 173 -241 2347 91 0 0 chr18 30415039 30415348 -55573586 + AluSc SINE Alu 1 309 0 1918 139 21 77 chr18 30415348 30415532 -55573402 + MLT2D LTR ERVL 173 366 -48 242 132 19 0 chr18 30415533 30415586 -55573348 + CT-rich Low_complexity Low_complexity 1 54 0 228 67 0 0 chr18 30415590 30415620 -55573314 + (TG)n Simple_repeat Simple_repeat 1 30 0 289 93 0 5 chr18 30415629 30415678 -55573256 + MLT2C2 LTR ERVL 427 464 0 1470 261 15 91 chr18 30415723 30416519 -55572415 - L1M4 LINE L1 -1110 5036 4301 316 290 94 53 chr18 30416527 30416772 -55572162 - L1M4 LINE L1 -1754 4392 4138 550 291 70 44 chr18 30416936 30417401 -55571533 - L1M4 LINE L1 -2151 3995 3510 1876 111 25 11 chr18 30417401 30417796 -55571138 + AluSx SINE Alu 1 399 0 550 291 70 44 chr18 30417796 30417896 -55571038 - L1M4 LINE L1 -2636 3510 3414 552 77 0 0 chr18 30418054 30418132 -55570802 + Alu SINE Alu 232 309 -2 229 158 0 0 chr18 30418155 30418193 -55570741 - L1ME3A LINE L1 -107 6063 6026 495 255 63 7 chr18 30418375 30418574 -55570360 - L1ME3A LINE L1 -248 5914 5708 228 289 202 0 chr18 30418586 30418700 -55570234 + MIR SINE MIR 56 192 -70 1617 189 4 7 chr18 30419181 30419514 -55569420 + AluJo SINE Alu 3 334 0 508 256 39 0 chr18 30419532 30419661 -55569273 - MER94 DNA DNA 0 134 1 606 200 36 72 chr18 30420486 30420582 -55568352 - MER53 DNA DNA -1 188 101 1657 158 72 36 chr18 30420582 30420944 -55567990 - THE1C LTR MaLR 0 375 1 606 200 36 72 chr18 30420944 30421042 -55567892 - MER53 DNA DNA -88 101 1 198 103 0 0 chr18 30421182 30421211 -55567723 + (TTC)n Simple_repeat Simple_repeat 1 29 0 204 231 0 0 chr18 30421284 30421336 -55567598 + (TAA)n Simple_repeat Simple_repeat 3 54 0 21 57 0 0 chr18 30422067 30422102 -55566832 + AT_rich Low_complexity Low_complexity 1 35 0 2254 229 92 51 chr18 30422287 30423584 -55565350 - L1ME1 LINE L1 -6 6229 4845 288 0 0 0 chr18 30423584 30423616 -55565318 + (TG)n Simple_repeat Simple_repeat 2 33 0 2254 229 92 51 chr18 30423616 30423908 -55565026 - L1ME1 LINE L1 -1390 4845 4566 2740 282 65 9 chr18 30423920 30425082 -55563852 - L1ME1 LINE L1 -1814 4401 3175 2940 264 124 61 chr18 30425093 30427041 -55561893 - L1ME1 LINE L1 -4292 2104 34 950 328 40 26 chr18 30428167 30428597 -55560337 + LTR16A LTR ERVL 1 436 -14 256 344 33 0 chr18 30428607 30428697 -55560237 + HERV16 LTR ERVL 11 103 -4893 2305 104 0 0 chr18 30428731 30429040 -55559894 + AluSx SINE Alu 3 311 -1 1363 351 75 32 chr18 30429332 30430560 -55558374 + HERVL LTR ERVL 3835 5115 -539 887 312 46 3 chr18 30430920 30431202 -55557732 + LTR16A LTR ERVL 157 450 0 192 263 0 0 chr18 30431259 30431297 -55557637 + MIR SINE MIR 75 112 -150 21 0 0 0 chr18 30431962 30431983 -55556951 + AT_rich Low_complexity Low_complexity 1 21 0 254 248 38 15 chr18 30433850 30433983 -55554951 + L1MDa LINE L1 2444 2579 -3961 453 342 84 40 chr18 30434028 30434575 -55554359 + L1MDa LINE L1 2666 3236 -3304 25 0 0 0 chr18 30435445 30435470 -55553464 + AT_rich Low_complexity Low_complexity 1 25 0 2068 119 0 0 chr18 30435947 30436233 -55552701 - AluSx SINE Alu -26 286 1 613 288 95 57 chr18 30437252 30438119 -55550815 + L1MDa LINE L1 4194 5093 -1447 185 191 0 21 chr18 30439028 30439075 -55549859 + (CATA)n Simple_repeat Simple_repeat 2 47 0 264 253 52 25 chr18 30439075 30439231 -55549703 + L1M1 LINE L1 5683 5841 -327 2068 162 53 12 chr18 30439854 30440267 -55548667 - MSTB1 LTR MaLR 0 432 3 234 0 0 0 chr18 30441957 30441983 -55546951 + (CA)n Simple_repeat Simple_repeat 1 26 0 204 40 0 0 chr18 30442034 30442059 -55546875 + (TG)n Simple_repeat Simple_repeat 2 26 0 247 191 0 0 chr18 30443137 30443184 -55545750 + L2 LINE L2 3205 3251 -21 418 266 16 69 chr18 30443470 30443658 -55545276 + MER74A LTR ERVL 375 552 -6 242 289 79 9 chr18 30443846 30443960 -55544974 + L2 LINE L2 2274 2395 -919 294 333 45 73 chr18 30444193 30444439 -55544495 + L2 LINE L2 2815 3053 -219 4300 202 16 9 chr18 30445850 30446591 -55542343 - L1MB1 LINE L1 0 6168 5411 2301 159 24 7 chr18 30446591 30447011 -55541923 - MSTA LTR MaLR -1 427 1 4300 202 16 9 chr18 30447011 30447638 -55541296 - L1MB1 LINE L1 -757 5411 4790 3522 215 64 6 chr18 30447637 30448539 -55540395 + L1MB1 LINE L1 3820 4774 -1372 * 2153 175 40 50 chr18 30448558 30449056 -55539878 - L1MB3 LINE L1 -3 6180 5688 426 251 62 39 chr18 30448912 30449091 -55539843 - L1PA10 LINE L1 -343 5825 5643 * 2958 320 107 33 chr18 30449240 30450954 -55537980 - L2 LINE L2 -307 3006 1172 291 254 0 0 chr18 30451444 30451511 -55537423 + (CA)n Simple_repeat Simple_repeat 2 68 0 351 0 0 0 chr18 30452780 30452819 -55536115 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1686 182 4 0 chr18 30452821 30453101 -55535833 - AluJb SINE Alu -30 282 2 200 146 0 21 chr18 30453748 30453796 -55535138 + (CA)n Simple_repeat Simple_repeat 2 48 0 2537 57 0 0 chr18 30454014 30454314 -55534620 + AluY SINE Alu 1 300 -11 1549 147 0 96 chr18 30454607 30454920 -55534014 - AluJo SINE Alu -25 287 5 243 318 99 51 chr18 30455359 30455441 -55533493 + MLT1J LTR MaLR 118 195 -316 1785 147 142 39 chr18 30455441 30455829 -55533105 + MSTA LTR MaLR 1 428 0 243 318 99 51 chr18 30455829 30456120 -55532814 + MLT1J LTR MaLR 195 509 -2 637 131 42 18 chr18 30457593 30457761 -55531173 + CT-rich Low_complexity Low_complexity 1 172 0 1687 143 0 19 chr18 30459170 30459429 -55529505 + AluSx SINE Alu 29 282 -30 268 341 43 29 chr18 30459805 30459943 -55528991 - MER5A DNA MER1_type 0 189 50 381 372 55 5 chr18 30460208 30460407 -55528527 + MLT1J1 LTR MaLR 100 308 -138 320 301 113 74 chr18 30460577 30460806 -55528128 - MIR SINE MIR -15 247 10 210 135 0 0 chr18 30461546 30461574 -55527360 + (T)n Simple_repeat Simple_repeat 1 31 -6 195 42 0 0 chr18 30461574 30461598 -55527336 + (TCCCC)n Simple_repeat Simple_repeat 5 28 0 210 135 0 0 chr18 30461598 30461606 -55527328 + (T)n Simple_repeat Simple_repeat 30 37 0 3556 174 34 58 chr18 30462004 30462877 -55526057 - L1MA9 LINE L1 -39 6273 5422 419 286 80 3 chr18 30463237 30463406 -55525528 + MIR SINE MIR 32 210 -37 6858 69 8 52 chr18 30463448 30464682 -55524252 - L1PA7 LINE L1 0 6154 4942 953 321 67 29 chr18 30464911 30465356 -55523578 + LTR16B LTR ERVL 1 462 -2 592 250 95 0 chr18 30465408 30465556 -55523378 - FRAM SINE Alu -17 159 1 324 294 132 15 chr18 30466895 30467031 -55521903 + MLT1J LTR MaLR 46 197 -314 474 210 96 61 chr18 30467624 30467853 -55521081 + MER20B DNA MER1_type 523 759 -24 347 324 91 6 chr18 30468469 30468645 -55520289 - MIR SINE MIR 0 262 72 568 298 76 52 chr18 30471065 30471488 -55517446 + L1ME1 LINE L1 77 509 -5887 479 279 52 26 chr18 30471515 30471820 -55517114 + L1ME1 LINE L1 673 985 -5411 894 297 110 24 chr18 30471826 30472243 -55516691 + LTR40c LTR ERVL 1 453 -12 1964 116 38 9 chr18 30472542 30472914 -55516020 + LTR7 LTR ERV1 18 450 0 444 262 119 6 chr18 30472930 30473098 -55515836 + HERVL40 LTR ERVL 958 1144 -4386 651 26 0 0 chr18 30473109 30473186 -55515748 + (TC)n Simple_repeat Simple_repeat 2 78 0 341 231 13 13 chr18 30473254 30473332 -55515602 + HERVL40 LTR ERVL 1288 1365 -4165 328 218 40 0 chr18 30473694 30473795 -55515139 + L1ME1 LINE L1 2976 3080 -3135 444 238 69 10 chr18 30473802 30474004 -55514930 + L1ME1 LINE L1 3179 3392 -2823 515 262 109 41 chr18 30474009 30474230 -55514704 + L1ME1 LINE L1 4268 4503 -1712 1135 272 41 22 chr18 30474262 30474385 -55514549 + L1ME1 LINE L1 4477 4596 -1619 2097 111 0 10 chr18 30474385 30474683 -55514251 - AluSx SINE Alu -17 295 1 1874 130 28 11 chr18 30474683 30474968 -55513966 - AluSx SINE Alu -22 290 1 1135 272 41 22 chr18 30474968 30475335 -55513599 + L1ME1 LINE L1 4595 4977 -1238 1249 196 113 15 chr18 30475350 30475687 -55513247 - MER90 LTR ERV1 -34 580 211 2457 237 29 50 chr18 30475690 30476474 -55512460 + L1ME1 LINE L1 5461 6228 -7 24 96 0 0 chr18 30477696 30477769 -55511165 + AT_rich Low_complexity Low_complexity 1 73 0 35 24 0 0 chr18 30477830 30477872 -55511062 + AT_rich Low_complexity Low_complexity 1 42 0 4806 153 40 0 chr18 30478209 30479009 -55509925 + Tigger1 DNA MER2_type 2 833 -1585 1803 151 20 16 chr18 30479009 30479353 -55509581 - MER4A LTR ERV1 0 664 261 572 141 10 20 chr18 30479353 30479452 -55509482 - MER4A LTR ERV1 -566 98 1 622 180 16 0 chr18 30479452 30479574 -55509360 + Tigger1 DNA MER2_type 830 953 -1465 2134 158 33 0 chr18 30479617 30479978 -55508956 + Tigger1 DNA MER2_type 2041 2413 -5 231 167 0 0 chr18 30480212 30480254 -55508680 + T-rich Low_complexity Low_complexity 1 42 0 1564 242 110 34 chr18 30481231 30481731 -55507203 + MER92C LTR ERV1 1 538 -16 622 306 82 46 chr18 30481751 30482117 -55506817 - L2 LINE L2 0 3313 2935 345 24 0 0 chr18 30482316 30482358 -55506576 + (TG)n Simple_repeat Simple_repeat 2 43 0 279 250 9 69 chr18 30482453 30482569 -55506365 - Charlie2 DNA MER1_type -899 1963 1855 * 359 278 286 4 chr18 30482557 30482816 -55506118 - Charlie2 DNA MER1_type -2530 332 1 511 294 27 33 chr18 30482819 30483003 -55505931 - L2 LINE L2 -1261 2053 1871 267 203 0 0 chr18 30483193 30483252 -55505682 + (CATATA)n Simple_repeat Simple_repeat 1 59 0 1837 254 18 26 chr18 30483254 30483710 -55505224 - MER82 DNA MER2_type -1 652 201 585 191 149 54 chr18 30484217 30484385 -55504549 - MER82 DNA MER2_type -446 207 24 1957 178 22 8 chr18 30484409 30484769 -55504165 + MLT1A1 LTR MaLR 1 365 0 2579 205 179 72 chr18 30484815 30485481 -55503453 - LTR28 LTR ERV1 0 1020 226 459 0 0 0 chr18 30485481 30485532 -55503402 + (TC)n Simple_repeat Simple_repeat 2 52 0 2579 205 179 72 chr18 30485532 30485786 -55503148 - LTR28 LTR ERV1 -794 226 1 36509 152 13 12 chr18 30485787 30492145 -55496789 - LTR28-int LTR ERV1 -1 7090 279 1480 266 84 50 chr18 30492156 30492946 -55495988 - LTR28-int LTR ERV1 -2462 626 6 2170 194 217 71 chr18 30492951 30493797 -55495137 - LTR28 LTR ERV1 -4 822 1 1017 296 88 25 chr18 30493821 30494342 -55494592 - L2 LINE L2 -1657 1657 1104 619 139 10 0 chr18 30495066 30495167 -55493767 + LTR60 LTR ERV1 1 102 -484 1676 169 17 60 chr18 30495176 30495832 -55493102 + LTR60 LTR ERV1 253 586 0 466 203 32 142 chr18 30495358 30495413 -55493521 + TAR1 Satellite telomeric 34 93 -2018 * 2456 94 0 0 chr18 30495413 30495721 -55493213 + AluSg SINE Alu 1 308 -2 466 203 32 142 chr18 30495721 30495976 -55492958 + TAR1 Satellite telomeric 93 310 -1801 209 319 70 75 chr18 30496518 30496759 -55492175 - L2 LINE L2 -75 3238 2999 3615 191 20 7 chr18 30498866 30499562 -55489372 - MER44D DNA MER2_type 0 705 1 2236 163 23 3 chr18 30500118 30500468 -55488466 + MER1A DNA MER1_type 3 359 -170 370 135 0 0 chr18 30500475 30500527 -55488407 + MER1A DNA MER1_type 477 528 -5 2792 157 160 3 chr18 30500546 30501126 -55487808 + LTR51 LTR ERV1 1 671 0 298 288 59 82 chr18 30501869 30502039 -55486895 + MER5B DNA MER1_type 11 176 -2 1913 194 48 71 chr18 30502441 30502978 -55485956 + L1MC3 LINE L1 6556 7080 -705 230 258 16 16 chr18 30502990 30503052 -55485882 + MLT1F1 LTR MaLR 42 103 -464 3246 199 121 17 chr18 30503067 30503834 -55485100 - MER21B LTR ERV1 -14 849 3 3076 165 20 42 chr18 30503835 30504476 -55484458 + L1MC3 LINE L1 7159 7785 0 218 283 0 0 chr18 30505937 30505983 -55482951 + (CATA)n Simple_repeat Simple_repeat 4 49 0 283 313 56 44 chr18 30506751 30506911 -55482023 + MIR SINE MIR 75 236 -26 564 74 41 8 chr18 30506918 30507040 -55481894 + (TA)n Simple_repeat Simple_repeat 1 126 0 379 299 39 24 chr18 30507107 30507234 -55481700 - L2 LINE L2 -1 3312 3184 231 329 0 0 chr18 30507238 30507311 -55481623 + MIR SINE MIR 78 150 -112 34 24 0 0 chr18 30507369 30507410 -55481524 + AT_rich Low_complexity Low_complexity 1 41 0 227 403 25 0 chr18 30507598 30507717 -55481217 + L2 LINE L2 3146 3267 -5 1484 52 0 0 chr18 30507966 30508139 -55480795 + AluY SINE Alu 29 201 -110 207 299 104 0 chr18 30509028 30509105 -55479829 - MIR SINE MIR -58 204 120 342 300 85 58 chr18 30510331 30510624 -55478310 + L1MEd LINE L1 811 1111 -5008 364 305 61 20 chr18 30510764 30510961 -55477973 + HAL1 LINE L1 1453 1657 -850 30 0 0 0 chr18 30511064 30511094 -55477840 + AT_rich Low_complexity Low_complexity 1 30 0 2878 169 13 29 chr18 30511104 30511629 -55477305 + Tigger7 DNA MER2_type 1 517 -1970 628 156 0 0 chr18 30511629 30511725 -55477209 + Tigger7 DNA MER2_type 2396 2491 0 595 324 79 40 chr18 30511871 30512365 -55476569 + L1ME LINE L1 6 518 -5552 459 287 83 73 chr18 30512598 30512912 -55476022 + L1ME LINE L1 586 902 -5178 288 0 0 0 chr18 30512978 30513010 -55475924 + (CA)n Simple_repeat Simple_repeat 1 32 0 266 299 54 43 chr18 30513018 30513202 -55475732 + L1MC1 LINE L1 473 658 -6063 1700 204 0 0 chr18 30513275 30513583 -55475351 + AluJo SINE Alu 1 308 -4 526 201 40 50 chr18 30513594 30513793 -55475141 + L1MC1 LINE L1 2454 2650 -3890 399 127 0 0 chr18 30513793 30513856 -55475078 + (TA)n Simple_repeat Simple_repeat 2 64 0 316 307 150 20 chr18 30513918 30514071 -55474863 - MIR SINE MIR -58 204 32 9344 248 31 14 chr18 30514569 30517700 -55471234 + L1MC1 LINE L1 2652 5833 -744 2384 258 59 31 chr18 30517699 30518382 -55470552 + L1PA11 LINE L1 1 702 -6879 * 1294 173 74 75 chr18 30518386 30518859 -55470075 - MER51A LTR ERV1 0 634 1 22106 179 26 22 chr18 30518884 30521711 -55467223 + L1PA11 LINE L1 1000 3816 -3796 480 115 26 0 chr18 30521711 30521789 -55467145 - MADE1 DNA Mariner 0 80 1 22106 179 26 22 chr18 30521789 30523202 -55465732 + L1PA11 LINE L1 3816 5223 -2389 1920 147 0 3 chr18 30523202 30523545 -55465389 + AluSx SINE Alu 1 342 0 22106 179 26 22 chr18 30523545 30525077 -55463857 + L1PA11 LINE L1 5223 7612 0 4575 155 44 6 chr18 30525098 30525931 -55463003 + L1MC1 LINE L1 5845 6709 -18 451 337 94 42 chr18 30525952 30526433 -55462501 + L1M4 LINE L1 2110 2615 -3531 344 140 0 0 chr18 30526976 30527026 -55461908 - THE1C LTR MaLR 0 428 379 1449 131 20 12 chr18 30527030 30527274 -55461660 - THE1C LTR MaLR -129 246 1 9798 115 35 41 chr18 30527274 30528864 -55460070 - THE1C-int LTR MaLR 0 1580 1 2336 126 13 11 chr18 30528864 30529238 -55459696 - THE1C LTR MaLR 0 375 1 21 57 0 0 chr18 30529251 30529286 -55459648 + AT_rich Low_complexity Low_complexity 1 35 0 300 360 40 24 chr18 30529632 30529757 -55459177 + L2 LINE L2 3146 3272 0 334 284 116 32 chr18 30529994 30530184 -55458750 - L1M4 LINE L1 -3003 3143 2938 24 32 0 0 chr18 30530802 30530833 -55458101 + AT_rich Low_complexity Low_complexity 1 31 0 2096 137 42 22 chr18 30532291 30532648 -55456286 - THE1B LTR MaLR 0 364 1 262 250 86 78 chr18 30533412 30533540 -55455394 + L2 LINE L2 3163 3291 -22 28 0 0 0 chr18 30533700 30533728 -55455206 + AT_rich Low_complexity Low_complexity 1 28 0 225 65 0 0 chr18 30533919 30533950 -55454984 + (TC)n Simple_repeat Simple_repeat 2 32 0 336 125 56 14 chr18 30534222 30534294 -55454640 + MLT1D LTR MaLR 431 505 0 992 246 42 15 chr18 30534442 30534702 -55454232 - MLT1D LTR MaLR -75 430 164 626 191 27 90 chr18 30534736 30534924 -55454010 - MLT1D LTR MaLR -329 176 1 187 342 138 13 chr18 30535364 30535516 -55453418 + MIR SINE MIR 66 236 -26 245 357 20 0 chr18 30535578 30535678 -55453256 + MIR3 SINE MIR 63 165 -43 1779 113 68 86 chr18 30537623 30537780 -55451154 + THE1C LTR MaLR 1 159 -216 2176 98 0 3 chr18 30537780 30538067 -55450867 - AluSq SINE Alu -14 299 14 1779 113 68 86 chr18 30538067 30538291 -55450643 + THE1C LTR MaLR 159 375 0 370 79 32 0 chr18 30538619 30538682 -55450252 + (CA)n Simple_repeat Simple_repeat 2 66 0 298 279 163 0 chr18 30539184 30539270 -55449664 + MER5A DNA MER1_type 4 103 -86 736 316 90 23 chr18 30539389 30539788 -55449146 + MLT1J1 LTR MaLR 1 426 -20 25 83 0 0 chr18 30541014 30541074 -55447860 + AT_rich Low_complexity Low_complexity 1 60 0 21 57 0 0 chr18 30541398 30541433 -55447501 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr18 30541932 30541953 -55446981 + AT_rich Low_complexity Low_complexity 1 21 0 392 306 66 15 chr18 30543439 30543635 -55445299 - MIR SINE MIR -6 256 51 3559 187 88 35 chr18 30544099 30544950 -55443984 + MER49 LTR ERV1 1 896 -27 910 187 146 34 chr18 30544979 30545247 -55443687 - AluJo SINE Alu -14 298 1 209 296 72 24 chr18 30545750 30545875 -55443059 + L2 LINE L2 1257 1387 -1927 1890 156 88 0 chr18 30545930 30546269 -55442665 - Tigger2 DNA MER2_type -70 2648 2280 400 225 12 0 chr18 30546255 30546335 -55442599 + MER8 DNA MER2_type 159 239 0 * 306 345 111 35 chr18 30546488 30547091 -55441843 + L2 LINE L2 1637 2285 -1029 590 328 86 0 chr18 30547107 30547305 -55441629 + MIR SINE MIR 11 225 -37 2420 196 20 4 chr18 30547307 30547757 -55441177 + MER70A LTR ERVL 2 458 -14 348 385 109 10 chr18 30548079 30548567 -55440367 + L2 LINE L2 2139 2674 -640 239 185 56 0 chr18 30549416 30549470 -55439464 - MER58A DNA MER1_type -5 102 46 1588 219 45 55 chr18 30549474 30549944 -55438990 - MLT1C LTR MaLR -2 465 1 307 387 17 8 chr18 30550012 30550131 -55438803 + L2 LINE L2 3134 3253 -19 212 448 30 7 chr18 30550149 30550419 -55438515 + L2 LINE L2 2581 2856 -458 210 292 14 56 chr18 30550723 30550795 -55438139 + L2 LINE L2 3203 3271 -1 1096 122 17 6 chr18 30551302 30551483 -55437451 - L1PA14 LINE L1 -2 6159 5977 5214 144 41 6 chr18 30552603 30553844 -55435090 - L1PA14 LINE L1 0 6812 5553 12478 195 5 13 chr18 30553844 30556030 -55432904 - L1PA14 LINE L1 -4619 2168 2 386 321 128 36 chr18 30556627 30556901 -55432033 + L3 LINE CR1 1067 1365 -212 284 268 41 21 chr18 30557003 30557100 -55431834 + MIR SINE MIR 154 252 -10 214 265 0 0 chr18 30557104 30557153 -55431781 + (TAG)n Simple_repeat Simple_repeat 2 50 0 262 383 35 9 chr18 30557965 30558080 -55430854 - MIR SINE MIR -117 145 28 223 204 32 21 chr18 30558734 30558827 -55430107 + (TA)n Simple_repeat Simple_repeat 2 95 0 25 75 0 0 chr18 30558983 30559036 -55429898 + AT_rich Low_complexity Low_complexity 1 53 0 2073 289 94 78 chr18 30559161 30560995 -55427939 + HAL1 LINE L1 48 1909 -598 346 264 147 103 chr18 30560995 30561287 -55427647 - MLT1H LTR MaLR 0 549 245 665 248 72 38 chr18 30561538 30561885 -55427049 + HAL1 LINE L1 1979 2337 -170 300 263 88 26 chr18 30561894 30562008 -55426926 + HAL1 LINE L1 2387 2507 0 21 0 0 0 chr18 30562015 30562036 -55426898 + AT_rich Low_complexity Low_complexity 1 21 0 355 274 21 15 chr18 30564005 30564119 -55424815 + MIR SINE MIR 23 139 -69 21 36 0 0 chr18 30564563 30564591 -55424343 + AT_rich Low_complexity Low_complexity 1 28 0 230 233 93 12 chr18 30565089 30565175 -55423759 - L1ME4a LINE L1 -39 6082 5990 23 0 0 0 chr18 30565492 30565515 -55423419 + AT_rich Low_complexity Low_complexity 1 23 0 1084 143 125 3 chr18 30565820 30566139 -55422795 + LTR24 LTR ERV1 10 467 0 289 344 47 39 chr18 30567675 30567803 -55421131 - L2 LINE L2 -7 3265 3137 2179 116 0 0 chr18 30568613 30568906 -55420028 - AluSg SINE Alu -15 295 3 3853 193 39 38 chr18 30571307 30572245 -55416689 - L1MC3 LINE L1 -20 7765 6827 220 148 66 0 chr18 30572691 30572752 -55416182 + (TA)n Simple_repeat Simple_repeat 1 65 0 342 134 0 75 chr18 30573343 30573410 -55415524 + MER39 LTR ERV1 606 667 -40 6446 152 55 10 chr18 30574508 30575370 -55413564 - Tigger3b DNA MER2_type -1798 1230 301 408 20 0 0 chr18 30575370 30575419 -55413515 + (CA)n Simple_repeat Simple_repeat 2 50 0 6446 152 55 10 chr18 30575419 30575731 -55413203 - Tigger3b DNA MER2_type -2727 301 4 487 192 0 0 chr18 30576357 30576435 -55412499 + Tigger3(Golem) DNA MER2_type 4 81 -2948 * 881 225 142 22 chr18 30576431 30576742 -55412192 + LTR16A LTR ERVL 103 450 0 180 299 60 15 chr18 30576782 30576849 -55412085 + MIR3 SINE MIR 115 184 -24 493 342 58 56 chr18 30577872 30578232 -55410702 + L2 LINE L2 2596 2956 -358 569 289 79 49 chr18 30578315 30578562 -55410372 + L2 LINE L2 2973 3211 -102 1826 179 3 6 chr18 30578562 30578875 -55410059 - AluJb SINE Alu 0 312 1 569 289 79 49 chr18 30578875 30578896 -55410038 + L2 LINE L2 3211 3230 -83 1921 154 177 3 chr18 30578896 30579280 -55409654 - LTR47A LTR ERVL -1 451 1 569 289 79 49 chr18 30579280 30579315 -55409619 + L2 LINE L2 3230 3286 -27 684 191 77 188 chr18 30580373 30580814 -55408120 - MSTD LTR MaLR -4 392 1 1314 279 77 30 chr18 30581746 30582100 -55406834 - L1M3de LINE L1 -4534 2119 1720 180 0 0 0 chr18 30582100 30582120 -55406814 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1314 279 77 30 chr18 30582120 30582399 -55406535 - L1M3de LINE L1 -4933 1720 1456 833 329 53 34 chr18 30582752 30583163 -55405771 - L1M3de LINE L1 -5472 1181 763 25 51 0 0 chr18 30587014 30587053 -55401881 + AT_rich Low_complexity Low_complexity 1 39 0 671 299 90 35 chr18 30587230 30587574 -55401360 + L2 LINE L2 2580 2942 -372 444 269 41 53 chr18 30587574 30587745 -55401189 + L2 LINE L2 3145 3313 0 388 315 54 0 chr18 30587742 30587891 -55401043 - L2 LINE L2 -12 3301 3145 * 27 0 0 0 chr18 30588153 30588180 -55400754 + AT_rich Low_complexity Low_complexity 1 27 0 3618 114 15 0 chr18 30588325 30588867 -55400067 - L1PA13 LINE L1 -11 6152 5603 5165 156 32 1 chr18 30588871 30589940 -55398994 - L1PA13 LINE L1 -716 5458 4358 268 170 0 0 chr18 30590313 30590360 -55398574 - MLT2B1 LTR ERVL 0 515 469 40 37 0 0 chr18 30590360 30590414 -55398520 + AT_rich Low_complexity Low_complexity 1 54 0 351 0 0 0 chr18 30590414 30590453 -55398481 + (TG)n Simple_repeat Simple_repeat 2 40 0 25462 144 10 19 chr18 30590470 30596892 -55392042 + L1PA8A LINE L1 14 6443 -3 243 88 0 0 chr18 30596892 30596926 -55392008 + MLT2B1 LTR ERVL 473 506 -14 1994 206 73 11 chr18 30596960 30597412 -55391522 - MLT2B1 LTR ERVL -40 480 1 220 263 0 0 chr18 30597803 30597860 -55391074 + (CA)n Simple_repeat Simple_repeat 2 58 0 381 239 23 0 chr18 30598845 30598933 -55390001 + MER94 DNA DNA 20 109 -25 291 152 38 0 chr18 30599113 30599192 -55389742 + (TA)n Simple_repeat Simple_repeat 1 82 0 1652 99 5 0 chr18 30599997 30600220 -55388714 + AluY SINE Alu 84 307 -4 213 39 0 0 chr18 30600352 30600378 -55388556 + (A)n Simple_repeat Simple_repeat 1 26 0 180 179 0 0 chr18 30602030 30602069 -55386865 + GA-rich Low_complexity Low_complexity 2 40 0 287 122 0 0 chr18 30602499 30602540 -55386394 - U2 snRNA snRNA -147 41 1 1632 178 33 82 chr18 30603097 30603547 -55385387 - MSTB1 LTR MaLR 0 432 5 181 333 118 46 chr18 30603879 30604294 -55384640 + L2 LINE L2 2295 2739 -575 2110 97 0 0 chr18 30604356 30604674 -55384260 + AluY SINE Alu 3 320 0 1706 184 0 7 chr18 30604952 30605251 -55383683 - AluJb SINE Alu -15 297 1 1022 239 65 34 chr18 30605646 30605968 -55382966 + MER46C DNA MER2_type 2 333 -5 877 281 28 0 chr18 30606553 30606770 -55382164 - MIR SINE MIR -35 227 5 2425 236 91 53 chr18 30607745 30608527 -55380407 - L1MD3 LINE L1 -1 7807 6975 2221 143 8 19 chr18 30608527 30608906 -55380028 - THE1C LTR MaLR 0 375 1 2425 236 91 53 chr18 30608906 30609195 -55379739 - L1MD3 LINE L1 -833 6975 6698 1715 163 76 20 chr18 30609195 30609550 -55379384 + THE1C LTR MaLR 1 375 0 903 163 95 42 chr18 30610312 30610502 -55378432 + AluJb SINE Alu 112 311 -1 231 287 47 47 chr18 30610503 30610653 -55378281 + LTR16C LTR ERVL 342 491 0 24 67 0 0 chr18 30610706 30610751 -55378183 + AT_rich Low_complexity Low_complexity 1 45 0 252 86 0 0 chr18 30610864 30610899 -55378035 + (CA)n Simple_repeat Simple_repeat 2 36 0 1013 295 109 8 chr18 30611025 30611493 -55377441 + L1MEc LINE L1 44 558 -5838 12802 213 45 23 chr18 30611977 30618194 -55370740 + L1MA4 LINE L1 1 6855 -510 462 124 78 0 chr18 30618199 30618352 -55370582 + (TA)n Simple_repeat Simple_repeat 1 165 0 189 89 67 0 chr18 30618462 30618507 -55370427 + (TA)n Simple_repeat Simple_repeat 1 48 0 2466 147 27 35 chr18 30618512 30619028 -55369906 + L1MA4 LINE L1 6839 7350 -12 277 301 14 0 chr18 30619170 30619243 -55369691 + (CATA)n Simple_repeat Simple_repeat 2 75 0 598 287 11 0 chr18 30619246 30619434 -55369500 + L1ME LINE L1 5606 5795 -369 22 0 0 0 chr18 30620166 30620188 -55368746 + AT_rich Low_complexity Low_complexity 1 22 0 716 216 0 8 chr18 30620629 30620763 -55368171 + FLAM_C SINE Alu 1 133 0 23 0 0 0 chr18 30621441 30621464 -55367470 + AT_rich Low_complexity Low_complexity 1 23 0 1416 137 77 83 chr18 30623455 30623768 -55365166 + MER67D LTR ERV1 1 311 -203 24 32 0 0 chr18 30624054 30624085 -55364849 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr18 30624128 30624149 -55364785 + AT_rich Low_complexity Low_complexity 1 21 0 214 328 0 0 chr18 30624409 30624476 -55364458 + MIR SINE MIR 178 244 -18 * 445 316 13 7 chr18 30624472 30624624 -55364310 + MIR SINE MIR 84 236 -26 2834 121 26 0 chr18 30625690 30626112 -55362822 - MER57B LTR ERV1 0 434 2 2535 143 23 23 chr18 30626326 30626761 -55362173 - MER50 LTR ERV1 -299 435 1 242 130 22 22 chr18 30627488 30627534 -55361400 - MIR SINE MIR -71 191 146 4652 148 45 22 chr18 30627856 30628379 -55360555 + MER4D LTR ERV1 1 511 -392 2355 88 0 0 chr18 30628379 30628674 -55360260 + AluY SINE Alu 2 296 -15 4652 148 45 22 chr18 30628674 30628973 -55359961 + MER4D LTR ERV1 506 843 -55 3946 108 2 0 chr18 30628973 30629526 -55359408 + MER41A LTR ERV1 1 554 0 2784 140 15 0 chr18 30629577 30630018 -55358916 + MER41A-int LTR ERV1 77 625 -5321 * 12691 112 30 22 chr18 30629998 30633109 -55355825 + MER41A-int LTR ERV1 1416 5943 -3 3836 113 4 0 chr18 30633110 30633661 -55355273 + MER41A LTR ERV1 2 554 0 456 94 0 0 chr18 30633661 30633725 -55355209 + MER4E LTR ERV1 716 779 0 1847 255 35 18 chr18 30633725 30634239 -55354695 + LTR26 LTR ERV1 81 603 0 186 118 0 0 chr18 30634647 30634681 -55354253 + (TG)n Simple_repeat Simple_repeat 1 34 0 27 29 0 0 chr18 30634729 30634763 -55354171 + AT_rich Low_complexity Low_complexity 1 34 0 3025 175 23 60 chr18 30635029 30635762 -55353172 + MER67C LTR ERV1 5 710 0 393 75 0 0 chr18 30636288 30636341 -55352593 + (TG)n Simple_repeat Simple_repeat 2 54 0 604 283 104 17 chr18 30636608 30636848 -55352086 - MIR SINE MIR 0 262 2 410 296 132 13 chr18 30637406 30637558 -55351376 + MIR SINE MIR 11 180 -82 26 64 0 0 chr18 30637690 30637737 -55351197 + AT_rich Low_complexity Low_complexity 1 47 0 1959 88 0 4 chr18 30637857 30638108 -55350826 + AluY SINE Alu 35 284 -27 24 32 0 0 chr18 30638503 30638534 -55350400 + AT_rich Low_complexity Low_complexity 1 31 0 326 314 95 7 chr18 30638547 30638684 -55350250 - L2 LINE L2 0 3313 3165 7183 39 0 0 chr18 30638902 30639755 -55349179 - L1PA5 LINE L1 -2 6152 5300 1953 180 39 14 chr18 30640913 30641268 -55347666 + THE1B LTR MaLR 1 364 0 10666 119 12 13 chr18 30641268 30642850 -55346084 + THE1B-int LTR MaLR 1 1580 0 2162 154 31 14 chr18 30642850 30643208 -55345726 + THE1B LTR MaLR 1 364 0 25 31 0 0 chr18 30643886 30643918 -55345016 + AT_rich Low_complexity Low_complexity 1 32 0 30 59 0 0 chr18 30644561 30644612 -55344322 + AT_rich Low_complexity Low_complexity 1 51 0 960 244 54 40 chr18 30644668 30645148 -55343786 - L1MC5 LINE L1 -371 7590 7104 771 271 47 67 chr18 30645309 30645712 -55343222 + MLT1J LTR MaLR 77 471 -40 5544 135 24 0 chr18 30645740 30646689 -55342245 - L1PA16 LINE L1 -10 6156 5186 202 97 0 0 chr18 30647475 30647506 -55341428 + L2 LINE L2 3277 3307 -6 5061 131 97 75 chr18 30647730 30648865 -55340069 + pTR5 LTR ERV1 729 2020 -418 392 220 11 13 chr18 30648865 30648977 -55339957 + LTR30 LTR ERV1 377 475 -94 1457 121 5 0 chr18 30648977 30649192 -55339742 + pTR5 LTR ERV1 177 392 -2046 374 362 99 42 chr18 30649296 30649730 -55339204 - L2 LINE L2 0 3272 2814 26 30 0 0 chr18 30651444 30651477 -55337457 + AT_rich Low_complexity Low_complexity 1 33 0 727 282 107 78 chr18 30651506 30652020 -55336914 - MLT1F LTR MaLR -11 531 3 2266 94 0 10 chr18 30652294 30652592 -55336342 + AluSq SINE Alu 1 295 -18 1178 341 51 16 chr18 30652592 30653340 -55335594 - ERVL LTR ERVL -1120 4644 3871 182 298 21 0 chr18 30655683 30655730 -55333204 + L3 LINE CR1 406 453 -1124 421 219 0 0 chr18 30655807 30655889 -55333045 + MLT1C LTR MaLR 1 82 -385 2621 144 42 0 chr18 30655890 30656294 -55332640 - MSTC LTR MaLR -2 426 6 1368 219 82 11 chr18 30656298 30656663 -55332271 + MLT1C LTR MaLR 77 467 0 519 319 100 4 chr18 30656921 30657150 -55331784 + MIR SINE MIR 12 262 0 331 263 194 28 chr18 30657326 30657543 -55331391 + MIR SINE MIR 3 255 -7 996 290 86 13 chr18 30657820 30658192 -55330742 + LTR16A LTR ERVL 3 401 -49 249 178 44 0 chr18 30658241 30658286 -55330648 + LTR16A LTR ERVL 404 450 0 1860 141 0 13 chr18 30660881 30661180 -55327754 + AluSx SINE Alu 6 300 -12 2028 180 25 42 chr18 30661378 30661811 -55327123 - MSTB LTR MaLR 0 426 1 192 316 66 0 chr18 30661879 30661955 -55326979 - MIR SINE MIR -30 232 152 423 324 40 0 chr18 30662325 30662547 -55326387 + L1MC/D LINE L1 5563 5793 -2015 238 200 0 25 chr18 30662669 30662749 -55326185 + GA-rich Low_complexity Low_complexity 3 80 0 668 140 9 0 chr18 30662964 30663078 -55325856 + AluSp SINE Alu 1 115 -198 867 317 44 30 chr18 30663538 30663904 -55325030 + MLT1K LTR MaLR 56 426 -162 1092 255 73 75 chr18 30663970 30664491 -55324443 + LTR67 LTR ERVL 29 548 -9 2401 60 0 0 chr18 30664645 30664947 -55323987 - L1PA8 LINE L1 -235 5937 5636 3181 77 0 0 chr18 30664952 30665367 -55323567 - L1P3 LINE L1 -415 5739 5325 1804 175 44 10 chr18 30665348 30665855 -55323079 + L1M1 LINE L1 4955 5473 -743 * 1116 67 0 0 chr18 30665857 30665992 -55322942 + AluSq/x SINE Alu 1 135 -178 2814 0 0 3 chr18 30666104 30666414 -55322520 + AluYa5 SINE Alu 1 309 -2 346 300 59 41 chr18 30666514 30666684 -55322250 + L1ME LINE L1 5320 5492 -629 298 306 19 37 chr18 30666732 30666840 -55322094 - L2 LINE L2 0 3313 3208 241 295 148 27 chr18 30667457 30667606 -55321328 + MIR3 SINE MIR 31 197 -11 560 237 8 0 chr18 30668426 30668544 -55320390 + L2 LINE L2 3190 3308 -5 964 256 40 32 chr18 30668834 30669111 -55319823 - MLT1F LTR MaLR -7 647 251 343 83 33 0 chr18 30669335 30669395 -55319539 + (TC)n Simple_repeat Simple_repeat 1 62 0 412 185 0 43 chr18 30669398 30669490 -55319444 - MLT1F LTR MaLR -477 90 3 293 309 17 62 chr18 30669728 30669906 -55319028 - MER5A DNA MER1_type 0 189 20 309 289 16 39 chr18 30669761 30669889 -55319045 + MER5B DNA MER1_type 29 153 -25 1643 130 13 0 chr18 30671317 30671581 -55317353 + AluSx SINE Alu 45 311 0 645 244 6 13 chr18 30671921 30672077 -55316857 - MLT1H1 LTR MaLR -13 542 388 682 118 10 0 chr18 30672326 30672428 -55316506 + LTR43 LTR ERV1 191 293 -309 191 348 67 0 chr18 30673524 30673613 -55315321 - L2 LINE L2 -810 2504 2410 1305 323 85 52 chr18 30673794 30674718 -55314216 - L2 LINE L2 -19 3294 2304 369 0 0 0 chr18 30674718 30674759 -55314175 + (CA)n Simple_repeat Simple_repeat 2 42 0 1305 323 85 52 chr18 30674759 30675242 -55313692 - L2 LINE L2 -1009 2304 1838 958 184 42 32 chr18 30675243 30675460 -55313474 + MER20 DNA MER1_type 1 219 0 292 314 98 74 chr18 30675497 30675876 -55313058 - L2 LINE L2 -1497 1817 1430 256 366 111 40 chr18 30675872 30676404 -55312530 + L2 LINE L2 2325 2894 -420 * 204 220 51 17 chr18 30677308 30677367 -55311567 + MIR SINE MIR 120 180 -82 2144 103 0 26 chr18 30678480 30678792 -55310142 + AluY SINE Alu 7 310 -1 1876 184 33 17 chr18 30679986 30680345 -55308589 - MLT1A1 LTR MaLR 0 365 1 1661 147 4 4 chr18 30681727 30681986 -55306948 + AluSx SINE Alu 33 291 -21 27 0 0 0 chr18 30682291 30682318 -55306616 + AT_rich Low_complexity Low_complexity 1 27 0 2232 108 3 6 chr18 30683202 30683516 -55305418 + AluSp SINE Alu 1 313 0 1923 244 37 59 chr18 30683869 30683933 -55305001 - MER119 DNA MER1_type 0 583 519 2336 65 3 7 chr18 30683933 30684243 -55304691 - AluY SINE Alu -2 309 1 1923 244 37 59 chr18 30684243 30684767 -55304167 - MER119 DNA MER1_type -64 519 8 195 184 0 0 chr18 30684899 30684937 -55303997 + (CA)n Simple_repeat Simple_repeat 1 38 0 382 326 121 14 chr18 30684964 30685105 -55303829 - L2 LINE L2 -1 3271 3116 334 280 91 7 chr18 30686015 30686158 -55302776 - MIR SINE MIR 0 262 108 2181 128 0 0 chr18 30688573 30688885 -55300049 + AluSx SINE Alu 1 312 0 270 0 0 0 chr18 30692420 30692450 -55296484 + (CA)n Simple_repeat Simple_repeat 1 30 0 186 323 0 0 chr18 30692637 30692702 -55296232 + MIR SINE MIR 153 217 -45 259 301 65 32 chr18 30692745 30692868 -55296066 - L2 LINE L2 0 3272 3146 21 0 0 0 chr18 30692937 30692958 -55295976 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr18 30693217 30693240 -55295694 + AT_rich Low_complexity Low_complexity 1 23 0 479 291 17 0 chr18 30693425 30693542 -55295392 - L2 LINE L2 0 3313 3195 754 153 0 8 chr18 30694273 30694397 -55294537 + L1PB4 LINE L1 6029 6151 -5 271 263 66 0 chr18 30695150 30695226 -55293708 + MIR SINE MIR 123 203 -59 214 245 20 0 chr18 30695615 30695664 -55293270 + (TA)n Simple_repeat Simple_repeat 1 50 0 2126 49 0 0 chr18 30695889 30696154 -55292780 + L1PA4 LINE L1 5886 6150 -5 21 57 0 0 chr18 30697153 30697188 -55291746 + AT_rich Low_complexity Low_complexity 1 35 0 1261 188 61 72 chr18 30698042 30698519 -55290415 - MSTB LTR MaLR 0 426 1 2163 160 18 10 chr18 30698890 30699289 -55289645 - L1PB4 LINE L1 0 6156 5755 926 120 10 154 chr18 30699308 30699516 -55289418 - L1P5 LINE L1 -363 5793 5616 24 67 0 0 chr18 30699612 30699657 -55289277 + AT_rich Low_complexity Low_complexity 1 45 0 1813 209 66 34 chr18 30700082 30700580 -55288354 + MER67D LTR ERV1 1 514 0 1221 115 0 0 chr18 30700659 30700833 -55288101 - AluSg/x SINE Alu -5 307 134 31 0 0 0 chr18 30703477 30703508 -55285426 + AT_rich Low_complexity Low_complexity 1 31 0 1570 94 13 21 chr18 30703601 30703835 -55285099 - MER1B DNA MER1_type 0 339 108 3201 273 69 19 chr18 30703890 30705064 -55283870 + L1ME1 LINE L1 22 1254 -5142 303 140 54 11 chr18 30705089 30705182 -55283752 + (TA)n Simple_repeat Simple_repeat 1 97 0 2645 261 69 21 chr18 30705183 30706229 -55282705 + L1ME1 LINE L1 3582 4677 -1538 845 187 25 10 chr18 30706205 30706403 -55282531 + L1PA13 LINE L1 4881 5081 -1134 * 5129 15 10 2 chr18 30706414 30707008 -55281926 + L1PA4 LINE L1 5539 6137 -18 * 5690 108 30 14 chr18 30706993 30707008 -55281926 + L1PA13 LINE L1 5089 5102 -1130 198 0 0 0 chr18 30707008 30707030 -55281904 + (TAA)n Simple_repeat Simple_repeat 3 24 0 5690 108 30 14 chr18 30707030 30708131 -55280803 + L1PA13 LINE L1 5102 6221 -11 2199 96 3 0 chr18 30708155 30708446 -55280488 - AluSx SINE Alu -20 292 1 383 250 46 0 chr18 30708457 30708565 -55280369 + L1ME1 LINE L1 4687 4799 -1416 344 150 33 0 chr18 30708565 30708625 -55280309 - MER45B DNA AcHobo 0 1040 979 * 1385 217 29 7 chr18 30708623 30708899 -55280035 - MER45B DNA AcHobo -758 282 1 2450 225 48 70 chr18 30708899 30709323 -55279611 + L1ME1 LINE L1 4792 5223 -1012 1358 277 42 13 chr18 30709323 30709771 -55279163 - LTR40b LTR ERVL -1 461 1 2450 225 48 70 chr18 30709771 30709853 -55279081 + L1ME1 LINE L1 5223 5305 -930 314 23 0 23 chr18 30709853 30709897 -55279037 + (TA)n Simple_repeat Simple_repeat 1 43 0 2450 225 48 70 chr18 30709897 30709958 -55278976 + L1ME1 LINE L1 5305 5366 -869 1993 55 0 0 chr18 30709958 30710193 -55278741 - AluY SINE Alu -12 299 65 2450 225 48 70 chr18 30710193 30711089 -55277845 + L1ME1 LINE L1 5366 6231 -4 4507 219 53 22 chr18 30711115 30713270 -55275664 + L1MD1 LINE L1 3935 6234 -8 321 281 62 57 chr18 30713369 30713579 -55275355 + HAL1b LINE L1 607 817 -531 26 30 0 0 chr18 30713579 30713612 -55275322 + AT_rich Low_complexity Low_complexity 1 33 0 1474 137 91 137 chr18 30715981 30716441 -55272493 + L1MA9 LINE L1 5834 6272 -40 341 141 14 0 chr18 30716478 30716549 -55272385 + (TA)n Simple_repeat Simple_repeat 2 73 0 330 156 78 0 chr18 30716923 30716987 -55271947 - MIR SINE MIR -74 188 120 2165 87 0 0 chr18 30717106 30717383 -55271551 - AluSx SINE Alu -12 300 24 2094 117 3 0 chr18 30718805 30719114 -55269820 + AluSx SINE Alu 1 310 0 2494 30 7 3 chr18 30720446 30720742 -55268192 + AluY SINE Alu 1 297 -14 192 283 0 19 chr18 30721001 30721054 -55267880 - MIR SINE MIR -152 110 59 285 204 21 75 chr18 30721423 30721516 -55267418 - L2 LINE L2 0 3313 3226 1009 316 92 2 chr18 30723231 30723642 -55265292 - LTR33 LTR ERVL -73 448 1 2479 212 22 51 chr18 30724598 30725220 -55263714 - MER77 LTR ERV1 0 605 2 26 64 0 0 chr18 30725713 30725760 -55263174 + AT_rich Low_complexity Low_complexity 1 47 0 23 78 0 0 chr18 30726060 30726111 -55262823 + AT_rich Low_complexity Low_complexity 1 51 0 752 249 107 0 chr18 30727592 30727817 -55261117 - MER58B DNA MER1_type 0 341 93 309 181 0 14 chr18 30728233 30728305 -55260629 - L1MA10 LINE L1 -2 6332 6262 2458 223 57 16 chr18 30728329 30728673 -55260261 - L1MB7 LINE L1 -6 6178 5850 15467 150 24 21 chr18 30728673 30729067 -55259867 - Tigger4(Zombi) DNA MER2_type -2 2729 2338 2163 95 14 0 chr18 30729067 30729362 -55259572 + AluSp SINE Alu 1 299 -14 15467 150 24 21 chr18 30729362 30729931 -55259003 - Tigger4(Zombi) DNA MER2_type -393 2338 1772 1469 179 27 36 chr18 30729931 30730232 -55258702 + AluJb SINE Alu 3 300 -12 15467 150 24 21 chr18 30730232 30731989 -55256945 - Tigger4(Zombi) DNA MER2_type -959 1772 1 2458 223 57 16 chr18 30731989 30732291 -55256643 - L1MB7 LINE L1 -334 5850 5505 298 356 29 0 chr18 30732671 30732775 -55256159 + MER45A DNA AcHobo 1 107 -71 12496 212 36 15 chr18 30733104 30733238 -55255696 - L1MA9 LINE L1 0 7272 7142 222 62 0 0 chr18 30733238 30733270 -55255664 + (TG)n Simple_repeat Simple_repeat 1 32 0 12496 212 36 15 chr18 30733270 30736152 -55252782 - L1MA9 LINE L1 -130 7142 4123 2198 99 0 3 chr18 30736152 30736456 -55252478 + AluY SINE Alu 1 303 -8 12496 212 36 15 chr18 30736456 30737806 -55251128 - L1MA9 LINE L1 -3149 4123 2804 1077 176 5 0 chr18 30737902 30738090 -55250844 - AluJo SINE Alu -5 307 119 2783 259 111 9 chr18 30738181 30738373 -55250561 - L1MA9 LINE L1 -4177 2930 2759 180 0 0 0 chr18 30738373 30738393 -55250541 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2783 259 111 9 chr18 30738393 30739822 -55249112 - L1MA9 LINE L1 -4348 2759 1134 1403 244 6 6 chr18 30739828 30740139 -55248795 - L1MA9 LINE L1 -6714 316 6 312 309 0 0 chr18 30740152 30740236 -55248698 + MER45A DNA AcHobo 95 178 0 23 0 0 0 chr18 30741579 30741602 -55247332 + AT_rich Low_complexity Low_complexity 1 23 0 188 188 0 0 chr18 30741812 30741844 -55247090 + MER5B DNA MER1_type 6 37 -141 341 250 27 45 chr18 30741886 30741998 -55246936 - MER5B DNA MER1_type -48 130 21 421 218 0 0 chr18 30743065 30743152 -55245782 + MER89 LTR ERV1 1 87 -472 849 192 35 0 chr18 30743201 30743373 -55245561 + MER89 LTR ERV1 380 557 -2 204 182 0 0 chr18 30744195 30744239 -55244695 + (TG)n Simple_repeat Simple_repeat 2 45 0 183 222 0 0 chr18 30744309 30744354 -55244580 + (CA)n Simple_repeat Simple_repeat 1 45 0 714 142 28 14 chr18 30744354 30744495 -55244439 + L1MA9 LINE L1 6170 6312 0 32 0 0 0 chr18 30744495 30744527 -55244407 + AT_rich Low_complexity Low_complexity 1 32 0 1103 226 177 46 chr18 30744713 30745147 -55243787 + MLT1F LTR MaLR 1 491 -51 210 135 52 31 chr18 30745174 30745270 -55243664 + (TTTAA)n Simple_repeat Simple_repeat 3 100 0 1632 79 4 0 chr18 30745274 30745502 -55243432 - L1MA2 LINE L1 0 6304 6076 270 125 0 0 chr18 30745504 30745544 -55243390 + MLT1F LTR MaLR 554 593 0 269 326 34 27 chr18 30745596 30745743 -55243191 + MIR SINE MIR 102 249 -13 2110 117 27 0 chr18 30745792 30746092 -55242842 + AluSx SINE Alu 1 308 -4 199 344 0 0 chr18 30747853 30747914 -55241020 + L2 LINE L2 2595 2655 -659 1754 229 28 25 chr18 30747919 30748356 -55240578 + MLT1D LTR MaLR 3 440 -65 21 82 0 0 chr18 30748357 30748406 -55240528 + AT_rich Low_complexity Low_complexity 1 49 0 300 218 0 0 chr18 30748418 30748496 -55240438 + MLT1D LTR MaLR 577 654 0 1786 207 144 37 chr18 30748569 30749158 -55239776 - MLT1E1 LTR MaLR -2 652 1 201 39 0 0 chr18 30749391 30749417 -55239517 + (TG)n Simple_repeat Simple_repeat 2 27 0 1462 196 77 50 chr18 30749875 30749977 -55238957 - LTR52 LTR ERVL -8 413 315 2286 43 7 0 chr18 30749977 30750306 -55238628 + AluY SINE Alu 1 331 0 1462 196 77 50 chr18 30750306 30750604 -55238330 - LTR52 LTR ERVL -106 315 1 297 293 43 104 chr18 30750760 30750924 -55238010 + L2 LINE L2 3119 3272 0 638 198 57 64 chr18 30751668 30751825 -55237109 - MLT1C LTR MaLR -207 183 28 1493 219 91 39 chr18 30752047 30752489 -55236445 - MLT1C LTR MaLR -2 465 1 1254 183 55 1 chr18 30754240 30754666 -55234268 + MLT1D LTR MaLR 1 505 0 286 333 129 20 chr18 30754695 30754896 -55234038 + MIR SINE MIR 2 224 -38 1565 207 82 58 chr18 30756157 30756655 -55232279 - MLT2B1 LTR ERVL -10 510 1 204 329 178 11 chr18 30756660 30756890 -55232044 + L2 LINE L2 2499 2788 -526 1707 175 10 3 chr18 30756890 30757181 -55231753 + AluJb SINE Alu 3 295 -17 204 329 178 11 chr18 30757181 30757236 -55231698 + L2 LINE L2 2788 2832 -482 633 213 128 0 chr18 30757253 30757441 -55231493 - MER33 DNA MER1_type -112 212 1 3342 140 9 26 chr18 30757508 30758044 -55230890 + MER1A DNA MER1_type 1 527 0 693 222 315 9 chr18 30759817 30760181 -55228753 - MER39 LTR ERV1 0 707 259 252 234 43 32 chr18 30760161 30760255 -55228679 - LTR48B LTR ERV1 -549 95 1 * 387 300 100 0 chr18 30760273 30760383 -55228551 - MER5B DNA MER1_type -53 125 5 223 186 0 0 chr18 30760786 30760829 -55228105 + A-rich Low_complexity Low_complexity 1 43 0 545 333 137 14 chr18 30760995 30761440 -55227494 + L2 LINE L2 1873 2372 -942 545 223 0 0 chr18 30761548 30761651 -55227283 + MER5A DNA MER1_type 11 113 -76 230 329 91 28 chr18 30761580 30761723 -55227211 - MER5A DNA MER1_type -31 158 7 * 420 280 23 34 chr18 30761782 30761957 -55226977 - MER5B DNA MER1_type -4 174 2 218 286 0 0 chr18 30763230 30763272 -55225662 - L2 LINE L2 -12 3260 3219 593 164 17 0 chr18 30763341 30763457 -55225477 + L1PB4 LINE L1 6037 6154 -2 290 382 24 29 chr18 30763521 30763691 -55225243 - MIR SINE MIR -75 187 19 300 27 0 0 chr18 30764417 30764454 -55224480 + (CA)n Simple_repeat Simple_repeat 2 38 0 2287 99 3 16 chr18 30764786 30765098 -55223836 - AluSx SINE Alu -4 308 1 25 0 0 0 chr18 30765671 30765696 -55223238 + AT_rich Low_complexity Low_complexity 1 25 0 398 53 18 0 chr18 30769572 30769629 -55219305 + (CA)n Simple_repeat Simple_repeat 1 58 0 2349 88 3 3 chr18 30769760 30770065 -55218869 - AluSg SINE Alu -5 305 1 1619 143 33 62 chr18 30770067 30770374 -55218560 - AluJo SINE Alu -14 298 1 193 387 27 0 chr18 30770831 30770906 -55218028 - L2 LINE L2 -287 2985 2909 1426 261 122 42 chr18 30772084 30772625 -55216309 - MLT1E LTR MaLR -9 584 1 33 43 0 0 chr18 30774773 30774820 -55214114 + AT_rich Low_complexity Low_complexity 1 47 0 3390 43 9 5 chr18 30774931 30775352 -55213582 + L1PA5 LINE L1 5729 6151 -3 324 265 10 10 chr18 30776211 30776309 -55212625 + HAL1b LINE L1 1244 1341 -7 491 294 101 52 chr18 30777335 30778006 -55210928 + L1M4 LINE L1 4 946 -5700 266 288 0 0 chr18 30778006 30778072 -55210862 + L1M4 LINE L1 1383 1448 -5117 1010 238 14 21 chr18 30778147 30778548 -55210386 + L1M4 LINE L1 823 1225 -5325 249 33 0 0 chr18 30778769 30778799 -55210135 + (A)n Simple_repeat Simple_repeat 1 30 0 789 202 49 0 chr18 30778856 30779059 -55209875 - L1M4 LINE L1 -1394 4752 4540 348 24 0 0 chr18 30779225 30779266 -55209668 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 2034 118 7 7 chr18 30779269 30779556 -55209378 - AluSx SINE Alu -23 289 3 184 222 0 0 chr18 30780493 30780529 -55208405 - MIR SINE MIR -179 83 48 2061 18 0 0 chr18 30780573 30780802 -55208132 + AluYb8 SINE Alu 82 310 -8 1517 127 0 26 chr18 30781154 30781382 -55207552 + AluSg/x SINE Alu 88 309 -3 260 270 16 0 chr18 30781388 30781451 -55207483 + GA-rich Low_complexity Low_complexity 2 65 0 1127 283 56 89 chr18 30781492 30781573 -55207361 + L2 LINE L2 2714 2796 -517 1776 167 7 3 chr18 30781573 30781882 -55207052 - AluJo SINE Alu 0 310 1 1127 283 56 89 chr18 30781882 30782438 -55206496 + L2 LINE L2 2796 3313 0 271 209 68 0 chr18 30782460 30782528 -55206406 - MIR SINE MIR -62 146 75 723 213 0 0 chr18 30782608 30782941 -55205993 + (TG)n Simple_repeat Simple_repeat 1 333 0 21 36 0 0 chr18 30783166 30783194 -55205740 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr18 30785714 30785743 -55203191 + AT_rich Low_complexity Low_complexity 1 29 0 30 27 0 0 chr18 30785760 30785797 -55203137 + AT_rich Low_complexity Low_complexity 1 37 0 1469 144 39 8 chr18 30786178 30786434 -55202500 + L1MB5 LINE L1 5875 6138 -36 790 31 21 0 chr18 30786686 30786783 -55202151 + L1PA10 LINE L1 6066 6164 -4 944 218 65 9 chr18 30786957 30787186 -55201748 - MIR SINE MIR -11 251 10 246 272 0 0 chr18 30787192 30787276 -55201658 - L1MC/D LINE L1 -605 5754 5688 2146 190 47 2 chr18 30788259 30788686 -55200248 - MER65C LTR ERV1 -15 446 1 2424 48 0 3 chr18 30788736 30789027 -55199907 + AluY SINE Alu 1 290 -21 21 104 0 0 chr18 30791224 30791301 -55197633 + AT_rich Low_complexity Low_complexity 1 77 0 382 309 159 36 chr18 30791541 30791761 -55197173 + MIR SINE MIR 6 252 -10 398 322 7 13 chr18 30792388 30792537 -55196397 + MER5B DNA MER1_type 1 148 -30 1913 172 0 0 chr18 30792539 30792847 -55196087 + AluJb SINE Alu 2 309 -3 1073 127 35 0 chr18 30793004 30793201 -55195733 + L1MA7 LINE L1 6078 6281 -10 24 85 0 0 chr18 30793431 30793490 -55195444 + AT_rich Low_complexity Low_complexity 1 59 0 264 242 16 0 chr18 30793998 30794060 -55194874 + L2 LINE L2 3191 3253 -60 1936 158 0 3 chr18 30794187 30794479 -55194455 + AluSx SINE Alu 9 299 -13 25 0 0 0 chr18 30794823 30794848 -55194086 + AT_rich Low_complexity Low_complexity 1 25 0 37 23 0 0 chr18 30795903 30795947 -55192987 + AT_rich Low_complexity Low_complexity 1 44 0 1710 143 54 4 chr18 30796011 30796290 -55192644 + AluSx SINE Alu 2 294 -18 316 320 0 0 chr18 30797252 30797352 -55191582 + U13 snRNA snRNA 4 103 -1 399 41 0 0 chr18 30798108 30798157 -55190777 + (CA)n Simple_repeat Simple_repeat 2 50 0 676 301 74 31 chr18 30798718 30799043 -55189891 + LTR16A LTR ERVL 112 450 0 257 0 0 29 chr18 30799165 30799199 -55189735 + (TG)n Simple_repeat Simple_repeat 2 34 0 2313 104 3 0 chr18 30800303 30800610 -55188324 + AluSp SINE Alu 5 312 -1 356 325 73 40 chr18 30801342 30801872 -55187062 + L1MEc LINE L1 1249 1834 -742 2260 109 0 6 chr18 30803972 30804283 -55184651 - AluSx SINE Alu -3 309 1 26 64 0 0 chr18 30804297 30804344 -55184590 + AT_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr18 30804733 30804754 -55184180 + AT_rich Low_complexity Low_complexity 1 21 0 2123 133 143 8 chr18 30805221 30805598 -55183336 + MSTA LTR MaLR 1 428 0 1875 66 0 0 chr18 30807358 30807585 -55181349 - AluY SINE Alu -84 227 1 456 247 0 0 chr18 30807853 30807942 -55180992 - L2 LINE L2 0 3272 3184 282 286 54 18 chr18 30808197 30808309 -55180625 + L2 LINE L2 2013 2128 -1186 2115 119 3 22 chr18 30808317 30808628 -55180306 - AluSx SINE Alu -7 305 1 409 391 61 30 chr18 30808675 30809036 -55179898 + L2 LINE L2 2899 3270 -2 411 306 98 41 chr18 30809243 30810092 -55178842 + L1ME LINE L1 4767 5660 -502 22 0 0 0 chr18 30810347 30810369 -55178565 + AT_rich Low_complexity Low_complexity 1 22 0 239 250 0 47 chr18 30812541 30812605 -55176329 + MIR SINE MIR 197 257 -5 1094 292 148 31 chr18 30812796 30813403 -55175531 + L2 LINE L2 22 699 -2615 1237 228 65 59 chr18 30813408 30813668 -55175266 + MLT1D LTR MaLR 5 155 -350 2357 39 4 0 chr18 30813668 30813970 -55174964 + AluY SINE Alu 1 303 0 1237 228 65 59 chr18 30813970 30814323 -55174611 + MLT1D LTR MaLR 155 505 0 5156 279 96 34 chr18 30814323 30816556 -55172378 + L2 LINE L2 718 3078 -235 614 108 0 18 chr18 30817686 30817797 -55171137 + (TAGA)n Simple_repeat Simple_repeat 2 110 0 422 235 162 0 chr18 30818075 30818211 -55170723 - L2 LINE L2 -921 2393 2236 1944 143 0 0 chr18 30818346 30818813 -55170121 + AluSx SINE Alu 1 467 0 488 238 14 0 chr18 30819220 30819439 -55169495 + CT-rich Low_complexity Low_complexity 1 222 0 1151 101 0 96 chr18 30820095 30820290 -55168644 - L1PB1 LINE L1 -3 6148 5975 2198 113 0 3 chr18 30820290 30820600 -55168334 - AluSx SINE Alu -3 309 1 1151 101 0 96 chr18 30820600 30820622 -55168312 - L1PB1 LINE L1 -176 5975 5952 226 376 112 0 chr18 30821256 30821426 -55167508 + L2 LINE L2 2308 2496 -818 316 368 80 5 chr18 30821885 30822086 -55166848 - L2 LINE L2 -887 2427 2212 758 145 36 0 chr18 30822150 30822288 -55166646 - L1MA7 LINE L1 0 6291 6149 3318 187 34 14 chr18 30822324 30822426 -55166508 - L1MA9 LINE L1 -38 6274 6175 333 47 0 0 chr18 30822426 30822469 -55166465 + (TG)n Simple_repeat Simple_repeat 1 43 0 3318 187 34 14 chr18 30822469 30823082 -55165852 - L1MA9 LINE L1 -137 6175 5545 328 243 34 81 chr18 30823296 30823364 -55165570 + MIR SINE MIR 112 182 -80 2068 119 0 42 chr18 30823364 30823675 -55165259 - AluSx SINE Alu -14 298 1 328 243 34 81 chr18 30823675 30823754 -55165180 + MIR SINE MIR 182 252 -10 275 229 302 10 chr18 30823751 30823847 -55165087 - L2 LINE L2 -5 3308 3185 * 548 286 78 37 chr18 30824023 30824345 -55164589 - Charlie8 DNA MER1_type -2020 397 63 2043 155 0 0 chr18 30824466 30824775 -55164159 - AluSx SINE Alu -3 309 1 496 252 94 112 chr18 30825000 30825185 -55163749 + MLT1J LTR MaLR 64 251 -260 2104 109 0 3 chr18 30825185 30825512 -55163422 - AluSq SINE Alu 0 326 1 496 252 94 112 chr18 30825512 30825699 -55163235 + MLT1J LTR MaLR 251 431 -80 1970 107 0 35 chr18 30825699 30826036 -55162898 + AluSc SINE Alu 1 327 0 496 252 94 112 chr18 30826036 30826116 -55162818 + MLT1J LTR MaLR 431 511 0 24 0 0 0 chr18 30826579 30826603 -55162331 + AT_rich Low_complexity Low_complexity 1 24 0 257 278 127 40 chr18 30826747 30826873 -55162061 - MIR3 SINE MIR -67 141 5 1425 185 50 25 chr18 30826880 30827161 -55161773 - AluJo SINE Alu -15 297 10 2097 102 0 11 chr18 30827336 30827666 -55161268 - AluSc SINE Alu 0 327 1 699 268 104 0 chr18 30827793 30828013 -55160921 - MLT1J LTR MaLR -12 499 257 549 250 163 6 chr18 30828163 30828323 -55160611 - MER5A DNA MER1_type -1 188 4 804 265 0 11 chr18 30828361 30828546 -55160388 - MER5A DNA MER1_type -6 183 1 27 0 0 0 chr18 30830579 30830606 -55158328 + AT_rich Low_complexity Low_complexity 1 27 0 1513 66 10 5 chr18 30831118 30831314 -55157620 - AluSq SINE Alu -13 300 104 21 0 0 0 chr18 30832613 30832634 -55156300 + AT_rich Low_complexity Low_complexity 1 21 0 231 227 30 15 chr18 30833796 30833862 -55155072 + MIR SINE MIR 88 154 -108 1434 159 41 6 chr18 30833869 30834278 -55154656 + MLT1C LTR MaLR 1 455 -12 339 230 23 23 chr18 30834288 30834375 -55154559 + MIR SINE MIR 175 261 -1 257 167 0 33 chr18 30835105 30835165 -55153769 + GA-rich Low_complexity Low_complexity 4 61 0 402 323 40 0 chr18 30835453 30835577 -55153357 - MIR3 SINE MIR -28 180 52 251 301 92 63 chr18 30837085 30837291 -55151643 + L2 LINE L2 2903 3114 -158 21 36 0 0 chr18 30837801 30837829 -55151105 + AT_rich Low_complexity Low_complexity 1 28 0 1560 115 18 0 chr18 30838464 30838690 -55150244 + MER30 DNA MER1_type 1 230 0 406 337 102 40 chr18 30838879 30839182 -55149752 - L3 LINE CR1 -3 1574 1253 396 0 0 0 chr18 30839848 30839892 -55149042 + (TG)n Simple_repeat Simple_repeat 1 44 0 224 229 9 38 chr18 30840887 30840992 -55147942 + (TA)n Simple_repeat Simple_repeat 1 102 0 2536 96 6 0 chr18 30842694 30843047 -55145887 + THE1A LTR MaLR 1 355 0 200 297 0 0 chr18 30843097 30843161 -55145773 + A-rich Low_complexity Low_complexity 1 64 0 263 245 143 87 chr18 30844675 30844871 -55144063 + MIR SINE MIR 19 225 -37 191 213 0 16 chr18 30844983 30845044 -55143890 + (TA)n Simple_repeat Simple_repeat 2 61 0 216 0 0 0 chr18 30845259 30845283 -55143651 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2031 142 7 0 chr18 30845782 30846092 -55142842 - AluSx SINE Alu 0 312 1 3070 148 17 84 chr18 30846201 30846810 -55142124 + L1MC1 LINE L1 5698 6260 -73 2425 57 0 10 chr18 30846810 30847124 -55141810 - AluY SINE Alu 0 311 1 3070 148 17 84 chr18 30847124 30847178 -55141756 + L1MC1 LINE L1 6260 6316 -17 21 36 0 0 chr18 30847222 30847250 -55141684 + AT_rich Low_complexity Low_complexity 1 28 0 3913 142 5 0 chr18 30847977 30848603 -55140331 - L1PA16 LINE L1 -16 6150 5522 24 32 0 0 chr18 30849215 30849246 -55139688 + AT_rich Low_complexity Low_complexity 1 31 0 216 0 0 0 chr18 30849846 30849870 -55139064 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 214 303 15 15 chr18 30851104 30851170 -55137764 + L2 LINE L2 3203 3268 -4 370 174 12 12 chr18 30851887 30851973 -55136961 + (CCA)n Simple_repeat Simple_repeat 3 88 0 707 215 6 0 chr18 30852004 30852181 -55136753 + (CCA)n Simple_repeat Simple_repeat 3 180 0 248 250 31 52 chr18 30852613 30852709 -55136225 - L3b LINE CR1 -209 1374 1281 2148 123 0 0 chr18 30853441 30853743 -55135191 + AluSx SINE Alu 1 302 -10 21 57 0 0 chr18 30853979 30854014 -55134920 + AT_rich Low_complexity Low_complexity 1 35 0 550 203 152 25 chr18 30855868 30856026 -55132908 + MER5B DNA MER1_type 1 178 0 1777 134 0 0 chr18 30856908 30857161 -55131773 + AluSq SINE Alu 1 253 -60 22 0 0 0 chr18 30859292 30859314 -55129620 + AT_rich Low_complexity Low_complexity 1 22 0 2034 134 0 0 chr18 30859558 30859850 -55129084 + AluSg SINE Alu 12 303 -7 2725 20 0 0 chr18 30860608 30860913 -55128021 - AluYb8 SINE Alu -13 305 1 21 0 0 0 chr18 30861890 30861911 -55127023 + AT_rich Low_complexity Low_complexity 1 21 0 278 264 0 23 chr18 30862372 30862459 -55126475 - L1MC4 LINE L1 -1339 6703 6619 1114 111 66 216 chr18 30862463 30862897 -55126037 - Tigger3(Golem) DNA MER2_type 0 3029 1 243 103 0 0 chr18 30862913 30862952 -55125982 + (TA)n Simple_repeat Simple_repeat 2 40 0 237 65 0 0 chr18 30865712 30865743 -55123191 + (TAGA)n Simple_repeat Simple_repeat 1 31 0 21 36 0 0 chr18 30866193 30866221 -55122713 + AT_rich Low_complexity Low_complexity 1 28 0 1147 209 126 67 chr18 30866315 30866689 -55122245 - MSTD LTR MaLR 0 396 1 1019 244 26 4 chr18 30866772 30867002 -55121932 + MIR SINE MIR 12 246 -16 29 0 0 0 chr18 30867552 30867581 -55121353 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr18 30867888 30867911 -55121023 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr18 30868073 30868094 -55120840 + AT_rich Low_complexity Low_complexity 1 21 0 567 253 123 84 chr18 30868164 30868472 -55120462 - MLT1K LTR MaLR -8 580 261 322 280 68 25 chr18 30868675 30868793 -55120141 - L2 LINE L2 -2 3311 3189 485 302 103 30 chr18 30869121 30869613 -55119321 - L1ME4a LINE L1 -211 5910 5382 2071 99 10 30 chr18 30869654 30869958 -55118976 - AluSq SINE Alu -15 298 1 1234 161 5 10 chr18 30871171 30871370 -55117564 + AluJb SINE Alu 1 198 -114 2285 57 7 0 chr18 30871470 30871779 -55117155 + AluY SINE Alu 2 312 0 583 175 10 0 chr18 30871779 30871882 -55117052 + AluJb SINE Alu 194 297 -15 249 33 0 0 chr18 30872040 30872070 -55116864 + (GA)n Simple_repeat Simple_repeat 2 31 0 201 265 0 0 chr18 30872470 30872537 -55116397 + A-rich Low_complexity Low_complexity 1 67 0 212 259 19 0 chr18 30872540 30872594 -55116340 - L2 LINE L2 -4 3309 3255 24 67 0 0 chr18 30873125 30873170 -55115764 + AT_rich Low_complexity Low_complexity 1 45 0 307 286 143 17 chr18 30873193 30873312 -55115622 - MIR3 SINE MIR -48 160 27 241 356 10 20 chr18 30874211 30874312 -55114622 - MIR SINE MIR -131 131 32 486 278 124 41 chr18 30874383 30874577 -55114357 - MER63A DNA MER1_type 0 210 1 189 0 0 0 chr18 30874672 30874693 -55114241 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 272 27 27 0 chr18 30874692 30874729 -55114205 + (TA)n Simple_repeat Simple_repeat 1 38 0 237 232 14 0 chr18 30874897 30874966 -55113968 + (TTG)n Simple_repeat Simple_repeat 2 71 0 919 159 6 74 chr18 30875135 30875311 -55113623 - FRAM SINE Alu -3 173 10 186 133 0 0 chr18 30875905 30875935 -55112999 + (CA)n Simple_repeat Simple_repeat 2 31 0 614 244 22 33 chr18 30876250 30876430 -55112504 + MER5B DNA MER1_type 1 178 0 790 130 82 0 chr18 30876799 30876945 -55111989 - L1MA4 LINE L1 -6 6294 6137 1438 201 114 69 chr18 30877434 30877881 -55111053 - MLT1C LTR MaLR 0 467 1 29 0 0 0 chr18 30878179 30878208 -55110726 + AT_rich Low_complexity Low_complexity 1 29 0 597 304 74 10 chr18 30878298 30878607 -55110327 + L2 LINE L2 2950 3278 -35 225 0 0 0 chr18 30878646 30878671 -55110263 + (TAA)n Simple_repeat Simple_repeat 3 27 0 2310 113 30 25 chr18 30878902 30879264 -55109670 + THE1B LTR MaLR 1 364 0 1173 188 172 0 chr18 30879311 30879561 -55109373 + AluJo SINE Alu 1 293 -9 469 226 73 37 chr18 30880086 30880250 -55108684 - HAL1 LINE L1 -111 2396 2227 1674 120 0 54 chr18 30880392 30880679 -55108255 - AluSq SINE Alu 0 312 40 413 284 16 0 chr18 30880689 30880816 -55108118 - HAL1 LINE L1 -604 1903 1775 623 266 17 6 chr18 30880853 30881026 -55107908 + L1MD3 LINE L1 6705 6879 -1116 277 211 92 0 chr18 30881077 30881153 -55107781 - L1MD3 LINE L1 -266 7729 7647 1818 255 61 46 chr18 30881156 30882268 -55106666 + L1MC4a LINE L1 6830 7986 -9 185 239 0 43 chr18 30883415 30883461 -55105473 - L2 LINE L2 -833 2481 2438 2007 162 44 56 chr18 30884171 30884602 -55104332 + MSTB LTR MaLR 1 426 0 3474 127 4 16 chr18 30884736 30885295 -55103639 - L1PA16 LINE L1 -9 6157 5606 303 269 9 37 chr18 30885360 30885468 -55103466 - MIR SINE MIR 0 262 158 374 282 94 34 chr18 30885565 30885714 -55103220 - MIR SINE MIR -90 172 15 764 238 50 10 chr18 30886282 30886484 -55102450 - MIR SINE MIR -2 260 51 475 255 49 54 chr18 30886809 30887013 -55101921 + LTR16C LTR ERVL 287 489 -2 1404 195 124 26 chr18 30887091 30887470 -55101464 - MLT2C2 LTR ERVL -48 416 1 292 380 12 12 chr18 30887616 30887782 -55101152 + ERVL LTR ERVL 947 1112 -3884 390 292 0 0 chr18 30888227 30888323 -55100611 + ERVL LTR ERVL 1727 1822 -3832 714 337 58 32 chr18 30888414 30888880 -55100054 + ERVL LTR ERVL 3494 3971 -1793 486 347 29 29 chr18 30889407 30889580 -55099354 + MER91A DNA MER1_type 1 173 -23 28 48 0 0 chr18 30889989 30890031 -55098903 + AT_rich Low_complexity Low_complexity 1 42 0 340 313 55 25 chr18 30890152 30890315 -55098619 - L1M4 LINE L1 -1945 4201 4034 582 261 11 97 chr18 30890613 30890881 -55098053 + MIR SINE MIR 13 257 -5 312 347 124 44 chr18 30891513 30891989 -55096945 + L1MC/D LINE L1 5332 5845 -1963 14469 144 17 8 chr18 30892101 30894497 -55094437 + Tigger1 DNA MER2_type 1 2417 -1 4476 130 7 0 chr18 30895974 30896657 -55092277 - L1PA16 LINE L1 -5 6161 5474 208 385 79 48 chr18 30897674 30898053 -55090881 - L2 LINE L2 0 3272 2882 207 366 85 20 chr18 30900453 30900606 -55088328 + MIR3 SINE MIR 44 206 -2 399 258 75 0 chr18 30901008 30901128 -55087806 + MIR SINE MIR 118 246 -16 184 213 21 21 chr18 30901899 30901946 -55086988 + L2 LINE L2 1175 1221 -2093 7703 83 5 16 chr18 30902670 30903739 -55085195 + MER11C LTR ERVK 1 1057 -14 1463 188 89 3 chr18 30904865 30905179 -55083755 + L1MB7 LINE L1 5836 6176 -8 310 348 55 17 chr18 30905536 30905717 -55083217 - MIR SINE MIR -74 188 1 830 252 61 104 chr18 30905947 30906282 -55082652 + L1ME3A LINE L1 5531 5826 -344 7082 153 27 15 chr18 30906282 30907416 -55081518 + HSMAR2 DNA Mariner 2 1155 -147 2258 110 0 0 chr18 30907416 30907725 -55081209 - AluSg SINE Alu -1 309 1 7082 153 27 15 chr18 30907725 30907875 -55081059 + HSMAR2 DNA Mariner 1155 1302 0 830 252 61 104 chr18 30907875 30908181 -55080753 + L1ME3A LINE L1 5826 6144 -26 655 316 97 26 chr18 30908528 30909086 -55079848 - L2 LINE L2 -252 3061 2385 905 225 67 39 chr18 30910004 30910288 -55078646 - MER97c DNA MER1_type? -798 292 1 195 129 0 0 chr18 30910329 30910360 -55078574 + (CATA)n Simple_repeat Simple_repeat 2 32 0 222 268 142 55 chr18 30911724 30911851 -55077083 + L2 LINE L2 3146 3283 -30 286 347 25 8 chr18 30911987 30912108 -55076826 + MIR3 SINE MIR 40 162 -46 740 319 58 56 chr18 30912135 30912614 -55076320 - MLT1J LTR MaLR -31 480 1 188 211 74 84 chr18 30913217 30913312 -55075622 + MIR SINE MIR 119 212 -50 2355 76 0 0 chr18 30914753 30915055 -55073879 - AluY SINE Alu -9 302 1 12921 197 30 30 chr18 30916321 30917608 -55071326 + L1P LINE L1 1723 3009 -3137 2028 116 35 3 chr18 30917608 30917893 -55071041 + AluY SINE Alu 1 294 -17 12921 197 30 30 chr18 30917893 30919595 -55069339 + L1P LINE L1 3009 4710 -1436 419 308 128 26 chr18 30919618 30919930 -55069004 + L1MC1 LINE L1 1259 1602 -4794 216 91 91 18 chr18 30920043 30920098 -55068836 + (TATATG)n Simple_repeat Simple_repeat 1 59 0 4235 160 57 71 chr18 30920679 30921633 -55067301 + L1MCa LINE L1 28 967 -5459 1506 238 29 25 chr18 30921637 30922082 -55066852 + L1MC1 LINE L1 4571 5017 -1198 3741 148 25 9 chr18 30922093 30922768 -55066166 + L1MC1 LINE L1 5704 6389 -13 4125 201 21 36 chr18 30923330 30923611 -55065323 - L1MB1 LINE L1 0 6754 6470 1977 130 20 7 chr18 30923611 30923910 -55065024 - AluSx SINE Alu -9 303 1 4125 201 21 36 chr18 30923910 30925510 -55063424 - L1MB1 LINE L1 -284 6470 4899 3867 138 105 28 chr18 30925527 30926916 -55062018 - pTR5 LTR ERV1 0 2606 1524 7223 252 61 26 chr18 30926940 30930024 -55058910 - L1MB1 LINE L1 -1847 4885 1955 1851 135 47 73 chr18 30930024 30930409 -55058525 + THE1C LTR MaLR 1 375 0 7223 252 61 26 chr18 30930409 30931461 -55057473 - L1MB1 LINE L1 -4777 1955 942 30010 114 14 24 chr18 30931488 30937931 -55051003 - L1PA8 LINE L1 -3 6484 1 891 322 32 23 chr18 30937931 30938360 -55050574 - L1MB1 LINE L1 -5212 1441 572 2049 106 14 3 chr18 30938512 30938794 -55050140 - AluSq SINE Alu -17 296 12 268 292 62 10 chr18 30939374 30939470 -55049464 + MIR SINE MIR 6 106 -156 1978 77 4 0 chr18 30941291 30941550 -55047384 + AluY SINE Alu 50 309 -2 303 122 44 133 chr18 30942089 30942179 -55046755 + L1MA10 LINE L1 6250 6331 -3 340 337 95 12 chr18 30942180 30942349 -55046585 + MIR SINE MIR 21 203 -59 1316 185 37 30 chr18 30942353 30942623 -55046311 + AluJo SINE Alu 22 293 -19 302 398 19 0 chr18 30943939 30944047 -55044887 - L1ME2 LINE L1 -84 6080 5971 714 325 20 31 chr18 30944163 30944620 -55044314 - L1ME3A LINE L1 -240 5922 5465 25 65 0 0 chr18 30949080 30949126 -55039808 + AT_rich Low_complexity Low_complexity 1 46 0 518 238 24 0 chr18 30950090 30950216 -55038718 - MER94 DNA DNA -4 130 2 207 139 0 0 chr18 30950774 30950810 -55038124 + (CA)n Simple_repeat Simple_repeat 2 37 0 310 278 28 7 chr18 30951529 30951673 -55037261 + (TA)n Simple_repeat Simple_repeat 2 148 0 3490 129 45 46 chr18 30952102 30952751 -55036183 + L1MC1 LINE L1 5668 6315 -18 21 36 0 0 chr18 30952976 30953004 -55035930 + AT_rich Low_complexity Low_complexity 1 28 0 317 325 46 13 chr18 30953038 30953189 -55035745 + L1ME LINE L1 5283 5438 -732 245 282 48 19 chr18 30953276 30953379 -55035555 + L1ME LINE L1 5574 5679 -442 * 978 129 11 44 chr18 30953374 30953578 -55035356 - L1MC1 LINE L1 -170 5996 5837 823 172 88 34 chr18 30954104 30954308 -55034626 + L1 LINE L1 4753 4967 -1179 189 0 0 0 chr18 30954308 30954329 -55034605 + (T)n Simple_repeat Simple_repeat 1 21 0 1006 201 0 0 chr18 30954329 30954523 -55034411 - L1PA8 LINE L1 0 6172 5979 2306 100 3 7 chr18 30955148 30955458 -55033476 + AluSp SINE Alu 5 313 0 356 325 73 40 chr18 30956190 30956720 -55032214 + L1MEc LINE L1 1249 1834 -742 2321 107 0 3 chr18 30958820 30959130 -55029804 - AluSx SINE Alu -3 309 1 26 64 0 0 chr18 30959144 30959191 -55029743 + AT_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr18 30959580 30959601 -55029333 + AT_rich Low_complexity Low_complexity 1 21 0 2087 127 143 13 chr18 30960068 30960447 -55028487 + MSTA LTR MaLR 1 428 0 1803 88 0 0 chr18 30962207 30962435 -55026499 - AluSq SINE Alu -85 228 1 849 103 0 0 chr18 30962799 30962916 -55026018 - AluSg/x SINE Alu 0 312 196 323 317 76 25 chr18 30963462 30963619 -55025315 + MIR SINE MIR 1 143 -65 2324 198 56 36 chr18 30964181 30964956 -55023978 + Charlie1 DNA MER1_type 1720 2552 -209 406 211 57 11 chr18 30964994 30965169 -55023765 + Charlie1 DNA MER1_type 2545 2727 -34 227 203 0 51 chr18 30965185 30965244 -55023690 + Charlie1 DNA MER1_type 2705 2760 -1 211 405 0 0 chr18 30965673 30965789 -55023145 - L2 LINE L2 -935 2379 2264 474 275 104 10 chr18 30966945 30967138 -55021796 - MIR SINE MIR -10 252 42 2183 129 0 3 chr18 30968459 30968762 -55020172 + AluSx SINE Alu 1 302 -10 28 0 0 0 chr18 30969280 30969308 -55019626 + AT_rich Low_complexity Low_complexity 1 28 0 767 186 8 0 chr18 30970032 30970161 -55018773 + FLAM_C SINE Alu 13 142 -1 194 353 58 32 chr18 30971409 30971599 -55017335 - L3b LINE CR1 -199 1384 1190 2656 103 16 3 chr18 30972721 30973098 -55015836 - L1PA10 LINE L1 -10 6158 5777 207 275 30 12 chr18 30973274 30973441 -55015493 + (TA)n Simple_repeat Simple_repeat 2 171 0 23 33 0 0 chr18 30973449 30973479 -55015455 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr18 30974258 30974280 -55014654 + AT_rich Low_complexity Low_complexity 1 22 0 865 293 172 18 chr18 30974499 30975176 -55013758 - L2 LINE L2 0 3313 2543 202 260 0 0 chr18 30975219 30975269 -55013665 - L2 LINE L2 0 3313 3264 196 302 106 37 chr18 30975420 30975609 -55013325 - L2 LINE L2 -260 3012 2811 265 306 19 37 chr18 30976062 30976170 -55012764 + L1MEd LINE L1 454 559 -5560 470 329 129 18 chr18 30976180 30976613 -55012321 + L1MB1 LINE L1 3889 4273 -1873 2124 59 0 26 chr18 30976613 30976886 -55012048 + AluY SINE Alu 35 300 -11 470 329 129 18 chr18 30976886 30977268 -55011666 + L1MB1 LINE L1 4273 4791 -1355 569 238 195 20 chr18 30977311 30977609 -55011325 - L1MC/D LINE L1 -2205 5603 5254 500 308 30 12 chr18 30977996 30978042 -55010892 + L1MB1 LINE L1 5555 5599 -2209 2017 143 0 3 chr18 30978042 30978335 -55010599 - AluJb SINE Alu -20 292 1 500 308 30 12 chr18 30978335 30978457 -55010477 + L1MB1 LINE L1 5599 5726 -2082 1213 167 31 4 chr18 30978874 30979101 -55009833 + L1MB1 LINE L1 5936 6168 0 893 169 7 13 chr18 30979461 30979615 -55009319 - AluJb SINE Alu -25 287 135 218 214 0 48 chr18 30981095 30981179 -55007755 + (CCCCG)n Simple_repeat Simple_repeat 5 84 0 180 111 0 0 chr18 30982336 30982363 -55006571 + (CATA)n Simple_repeat Simple_repeat 2 28 0 22 0 0 0 chr18 30982957 30982979 -55005955 + AT_rich Low_complexity Low_complexity 1 22 0 303 282 111 8 chr18 30984410 30984527 -55004407 + MIR SINE MIR 133 261 -1 2509 56 3 3 chr18 30984979 30985281 -55003653 - AluY SINE Alu -9 302 1 424 247 0 0 chr18 30985549 30985638 -55003296 - L2 LINE L2 0 3272 3184 424 247 0 0 chr18 30985920 30986009 -55002925 + L2 LINE L2 3184 3272 0 3444 45 10 0 chr18 30986520 30986938 -55001996 - L1PA4 LINE L1 -5 6150 5729 33 43 0 0 chr18 30987049 30987096 -55001838 + AT_rich Low_complexity Low_complexity 1 47 0 457 294 63 55 chr18 30987315 30987792 -55001142 + L1M4 LINE L1 3497 3977 -2169 249 258 121 0 chr18 30988219 30988285 -55000649 + L2 LINE L2 3234 3307 -6 1809 216 42 65 chr18 30988396 30988552 -55000382 - L1M4 LINE L1 -3406 2740 2582 2437 99 3 0 chr18 30988552 30988864 -55000070 - AluSp SINE Alu 0 313 1 1809 216 42 65 chr18 30988864 30989250 -54999684 - L1M4 LINE L1 -3564 2582 2210 656 219 107 6 chr18 30989250 30989428 -54999506 - MIR SINE MIR -47 215 20 21 0 0 0 chr18 30989609 30989630 -54999304 + AT_rich Low_complexity Low_complexity 1 21 0 1883 166 0 28 chr18 30989756 30990076 -54998858 - AluJb SINE Alu -1 311 1 182 371 13 26 chr18 30990320 30990471 -54998463 - L2 LINE L2 -159 3113 2965 216 0 0 0 chr18 30990770 30990794 -54998140 + (TTA)n Simple_repeat Simple_repeat 2 25 0 201 164 90 30 chr18 30991193 30991260 -54997674 - MIR SINE MIR -76 132 62 217 133 22 0 chr18 30991853 30991898 -54997036 - MIR SINE MIR -72 136 91 1428 236 10 0 chr18 30993059 30993360 -54995574 - AluSx SINE Alu -6 306 3 329 135 18 29 chr18 30993624 30993694 -54995240 - Alu SINE Alu -251 51 1 303 333 24 16 chr18 30993694 30993820 -54995114 - L1ME LINE L1 -454 5716 5590 2550 222 62 64 chr18 30996486 30996541 -54992393 - L1MC4 LINE L1 -79 7963 7909 216 0 0 0 chr18 30996541 30996565 -54992369 + (CA)n Simple_repeat Simple_repeat 2 25 0 2550 222 62 64 chr18 30996565 30997317 -54991617 - L1MC4 LINE L1 -133 7909 7156 2245 102 3 3 chr18 30997317 30997611 -54991323 + AluSp SINE Alu 1 294 -19 2550 222 62 64 chr18 30997611 30997793 -54991141 - L1MC4 LINE L1 -886 7156 6975 3461 245 59 23 chr18 30997896 30999143 -54989791 + L1M4c LINE L1 864 2294 -4088 1781 178 4 0 chr18 30999143 30999454 -54989480 + AluJb SINE Alu 1 312 0 3461 245 59 23 chr18 30999454 30999901 -54989033 + L1M4c LINE L1 2294 2723 -3659 2152 122 3 0 chr18 31000027 31000322 -54988612 + AluSx SINE Alu 1 296 -16 653 176 0 0 chr18 31000344 31000452 -54988482 + FLAM_A SINE Alu 1 108 -34 681 48 38 9 chr18 31000458 31000528 -54988406 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 681 48 38 9 chr18 31000528 31000633 -54988301 + (GAAA)n Simple_repeat Simple_repeat 4 111 0 627 63 0 0 chr18 31001047 31001126 -54987808 + AluY SINE Alu 218 296 -15 663 176 0 0 chr18 31001162 31001270 -54987664 + FLAM_A SINE Alu 1 108 -34 297 109 0 0 chr18 31001281 31001327 -54987607 + (GGGGA)n Simple_repeat Simple_repeat 3 48 0 552 15 0 0 chr18 31001437 31001502 -54987432 + (CA)n Simple_repeat Simple_repeat 1 65 0 1923 137 47 3 chr18 31001558 31001857 -54987077 - AluJo SINE Alu 0 312 1 2254 107 3 7 chr18 31001966 31002274 -54986660 + AluSx SINE Alu 1 307 -5 215 309 48 12 chr18 31003083 31003167 -54985767 + MIR3 SINE MIR 2 88 -120 2015 98 4 36 chr18 31003408 31003683 -54985251 - AluSp SINE Alu -10 303 38 217 333 0 0 chr18 31003687 31003744 -54985190 + L2 LINE L2 3232 3288 -25 2448 159 13 8 chr18 31003920 31004311 -54984623 - MLT1F LTR MaLR -1 541 149 1235 205 88 82 chr18 31004311 31004711 -54984223 - MLT1C LTR MaLR 0 467 66 2223 81 7 27 chr18 31005039 31005336 -54983598 + AluSx SINE Alu 3 293 -19 332 353 12 17 chr18 31005370 31005543 -54983391 - MIR3 SINE MIR -1 207 36 456 286 85 58 chr18 31007659 31007953 -54980981 - L2 LINE L2 0 3272 2971 195 204 0 0 chr18 31008682 31008726 -54980208 + MIR SINE MIR 110 153 -109 2134 127 0 0 chr18 31009590 31009881 -54979053 - AluSx SINE Alu -21 291 1 2471 60 3 0 chr18 31010189 31010489 -54978445 - AluY SINE Alu -10 301 1 587 223 54 4 chr18 31010491 31010674 -54978260 - L1MC4a LINE L1 -337 5825 5643 1767 178 27 0 chr18 31010678 31010976 -54977958 - AluJb SINE Alu -6 306 1 2315 103 3 7 chr18 31011780 31012090 -54976844 + AluSx SINE Alu 1 309 -3 462 284 113 21 chr18 31012183 31012422 -54976512 - MIR SINE MIR 0 262 2 250 300 12 0 chr18 31013127 31013207 -54975727 - MIR3 SINE MIR -13 195 115 2164 41 4 30 chr18 31014108 31014377 -54974557 - AluY SINE Alu -49 262 1 436 270 40 35 chr18 31014439 31014613 -54974321 + MIR3 SINE MIR 32 206 -2 439 206 136 58 chr18 31014668 31014823 -54974111 + MIR SINE MIR 38 204 -58 2599 66 0 0 chr18 31015041 31015346 -54973588 - AluY SINE Alu -6 305 1 518 275 90 12 chr18 31015829 31016046 -54972888 - MIR SINE MIR 0 262 25 242 231 96 39 chr18 31017429 31017533 -54971401 + L1ME4a LINE L1 5990 6099 -22 380 278 57 45 chr18 31017598 31017774 -54971160 + MER5B DNA MER1_type 1 178 0 666 228 200 0 chr18 31020043 31020223 -54968711 + MIR SINE MIR 34 249 -13 285 287 102 9 chr18 31021011 31021119 -54967815 + MIR SINE MIR 73 190 -72 410 290 19 0 chr18 31021856 31021963 -54966971 - L2 LINE L2 0 3313 3205 239 235 20 0 chr18 31022903 31022954 -54965980 + CT-rich Low_complexity Low_complexity 2 53 0 415 299 19 0 chr18 31023364 31023471 -54965463 + L2 LINE L2 3199 3307 -6 293 304 69 0 chr18 31023853 31023955 -54964979 + L2 LINE L2 3141 3249 -23 237 329 14 0 chr18 31024636 31024709 -54964225 + MIR3 SINE MIR 120 193 -15 227 293 129 26 chr18 31024754 31024870 -54964064 - L2 LINE L2 -1 3312 3185 1051 246 13 0 chr18 31024938 31025166 -54963768 - MIR SINE MIR 0 262 32 405 298 60 20 chr18 31025250 31025502 -54963432 - L2 LINE L2 -269 3044 2782 254 331 125 22 chr18 31025538 31025674 -54963260 + L2 LINE L2 3030 3179 -93 21 0 0 0 chr18 31026296 31026317 -54962617 + GC_rich Low_complexity Low_complexity 1 21 0 189 309 148 0 chr18 31026973 31027054 -54961880 - MIR SINE MIR -76 132 40 233 105 26 0 chr18 31027065 31027103 -54961831 - Charlie8 DNA MER1_type -989 1428 1390 340 275 147 0 chr18 31028259 31028368 -54960566 + L2 LINE L2 3148 3272 0 931 237 26 41 chr18 31028454 31028720 -54960214 + MIR SINE MIR 1 262 0 276 271 271 0 chr18 31029295 31029461 -54959473 + L1MC4a LINE L1 5413 5623 -2185 1842 181 0 22 chr18 31029517 31029656 -54959278 + AluJb SINE Alu 1 142 -170 2458 74 3 0 chr18 31029656 31029954 -54958980 + AluSp SINE Alu 1 299 -14 1842 181 0 22 chr18 31029954 31030129 -54958805 + AluJb SINE Alu 142 308 -4 451 244 52 16 chr18 31030180 31030373 -54958561 + L1MC4a LINE L1 5687 5886 -1922 297 0 0 0 chr18 31030438 31030471 -54958463 + (TG)n Simple_repeat Simple_repeat 2 34 0 1818 160 0 24 chr18 31030570 31030969 -54957965 - AluJb SINE Alu 0 393 2 1522 194 98 31 chr18 31031113 31031195 -54957739 - L1M4 LINE L1 -5549 993 918 393 22 0 0 chr18 31031195 31031241 -54957693 + (TG)n Simple_repeat Simple_repeat 1 46 0 1522 194 98 31 chr18 31031241 31031545 -54957389 - L1M4 LINE L1 -5624 918 581 1690 156 3 58 chr18 31032224 31032532 -54956402 + AluSx SINE Alu 1 291 -21 1827 134 91 0 chr18 31032592 31032868 -54956066 - AluSx SINE Alu -11 301 1 780 152 175 12 chr18 31033868 31034039 -54954895 + MER20 DNA MER1_type 3 201 -18 1442 173 28 0 chr18 31034049 31034303 -54954631 - MLT1A1 LTR MaLR -11 354 94 1649 153 0 12 chr18 31034306 31034555 -54954379 + AluSx SINE Alu 51 296 -16 2360 76 3 10 chr18 31034557 31034897 -54954037 + AluY SINE Alu 1 338 0 2035 155 0 7 chr18 31035289 31035598 -54953336 - AluJo SINE Alu -5 307 1 1338 129 0 0 chr18 31036723 31036916 -54952018 + AluJb SINE Alu 1 193 -119 2408 121 5 44 chr18 31037438 31037672 -54951262 - MER39 LTR ERV1 -16 691 478 2070 152 3 0 chr18 31037672 31037981 -54950953 + AluJo SINE Alu 1 310 -2 2408 121 5 44 chr18 31037981 31038158 -54950776 - MER39 LTR ERV1 -229 478 296 586 175 0 0 chr18 31038158 31038261 -54950673 + AluJb SINE Alu 206 308 -4 340 151 0 0 chr18 31038261 31038314 -54950620 - MER39 LTR ERV1 -652 55 3 369 293 285 11 chr18 31039598 31039956 -54948978 + L2 LINE L2 2255 2710 -604 230 209 0 0 chr18 31040018 31040061 -54948873 + Alu SINE Alu 44 86 -216 205 333 0 0 chr18 31040334 31040406 -54948528 + G-rich Low_complexity Low_complexity 4 75 0 284 244 61 18 chr18 31040891 31041007 -54947927 + MIR SINE MIR 5 120 -88 477 272 108 0 chr18 31041008 31041166 -54947768 + MIR SINE MIR 86 260 -2 784 279 31 0 chr18 31041834 31042060 -54946874 - MIR SINE MIR -17 245 13 4214 162 40 50 chr18 31042815 31043142 -54945792 + L1MB7 LINE L1 4930 5259 -925 198 0 0 0 chr18 31043142 31043164 -54945770 + (TA)n Simple_repeat Simple_repeat 2 23 0 2603 77 0 0 chr18 31043166 31043477 -54945457 - AluY SINE Alu 0 311 1 4214 162 40 50 chr18 31043477 31044356 -54944578 + L1MB7 LINE L1 5260 6126 -58 348 267 25 55 chr18 31044410 31044612 -54944322 + HAL1 LINE L1 2244 2439 -68 2234 98 0 13 chr18 31044661 31044968 -54943966 + AluSx SINE Alu 1 303 -9 864 295 126 5 chr18 31045036 31045639 -54943295 - L1M4 LINE L1 -1155 5227 4552 1376 164 0 13 chr18 31045640 31045872 -54943062 - AluJo SINE Alu 0 312 84 312 213 21 96 chr18 31045872 31045966 -54942968 - L1M4 LINE L1 -1823 4559 4473 308 221 52 13 chr18 31046023 31046100 -54942834 - L1M4 LINE L1 -5128 1256 1177 29 0 0 0 chr18 31046199 31046228 -54942706 + AT_rich Low_complexity Low_complexity 1 29 0 751 82 0 0 chr18 31046371 31046468 -54942466 + AluSg/x SINE Alu 206 302 -7 380 220 44 11 chr18 31046645 31046736 -54942198 - MIR SINE MIR -56 206 113 2455 132 66 30 chr18 31046784 31047225 -54941709 - MSTB2 LTR MaLR 0 457 1 384 259 92 46 chr18 31047409 31047583 -54941351 + MIR SINE MIR 14 195 -67 1921 90 4 0 chr18 31047732 31047976 -54940958 + AluSp SINE Alu 49 293 -20 223 337 30 10 chr18 31049923 31050024 -54938910 - L2 LINE L2 -2 3270 3168 230 222 92 30 chr18 31050854 31050966 -54937968 + MIR SINE MIR 15 133 -75 913 157 39 0 chr18 31051405 31051583 -54937351 + MER53 DNA DNA 3 187 -2 2081 141 0 16 chr18 31051951 31052257 -54936677 - AluSx SINE Alu -11 301 1 381 269 21 10 chr18 31052474 31052605 -54936329 - MIR SINE MIR -62 146 17 497 132 0 0 chr18 31053418 31053494 -54935440 + AluSp/q SINE Alu 227 302 -11 254 263 55 101 chr18 31053642 31053859 -54935075 + L1ME3A LINE L1 5964 6170 0 2413 99 0 0 chr18 31054094 31054396 -54934538 - AluSg SINE Alu -8 302 1 203 351 128 0 chr18 31055682 31055776 -54933158 - L2 LINE L2 -12 3260 3155 2286 92 0 38 chr18 31055937 31056081 -54932853 + AluSx SINE Alu 1 149 -163 2252 95 0 42 chr18 31056081 31056387 -54932547 + AluSg SINE Alu 1 293 -17 2286 92 0 38 chr18 31056387 31056559 -54932375 + AluSx SINE Alu 149 305 -7 2154 124 7 3 chr18 31056581 31056887 -54932047 + AluSx SINE Alu 1 307 -5 348 77 0 0 chr18 31056888 31056940 -54931994 + (GGAA)n Simple_repeat Simple_repeat 1 52 0 320 158 0 0 chr18 31056967 31057024 -54931910 + FLAM SINE Alu 76 132 -1 374 294 10 10 chr18 31057074 31057176 -54931758 - L3b LINE CR1 -195 1388 1287 321 337 22 45 chr18 31058364 31058542 -54930392 + L2 LINE L2 2888 3061 -211 2367 81 20 0 chr18 31058589 31058887 -54930047 + AluSx SINE Alu 1 304 -8 389 293 95 14 chr18 31059144 31059291 -54929643 + MIR SINE MIR 3 161 -101 226 189 95 27 chr18 31059291 31059365 -54929569 + MLT1L LTR MaLR 1 79 -536 284 157 129 0 chr18 31059511 31059581 -54929353 + MLT1J2 LTR MaLR 86 164 -286 827 111 51 0 chr18 31059597 31059714 -54929220 + AluSg/x SINE Alu 173 295 -15 265 265 84 0 chr18 31059839 31059922 -54929012 + MLT1J1 LTR MaLR 286 375 -71 944 171 0 0 chr18 31060103 31060255 -54928679 + FRAM SINE Alu 25 176 0 1902 157 20 7 chr18 31060258 31060564 -54928370 + AluSx SINE Alu 1 310 -2 25 0 0 0 chr18 31060564 31060589 -54928345 + AT_rich Low_complexity Low_complexity 1 25 0 770 236 57 54 chr18 31060809 31061106 -54927828 - Zaphod DNA AcHobo -2048 1983 1686 250 275 75 42 chr18 31061246 31061365 -54927569 - MIR SINE MIR -63 145 23 293 262 19 58 chr18 31061365 31061468 -54927466 + MER5B DNA MER1_type 1 99 -79 313 281 12 0 chr18 31062879 31062961 -54925973 - MIR SINE MIR 0 262 180 535 259 84 12 chr18 31063544 31063710 -54925224 - MIR SINE MIR -79 183 6 664 226 37 69 chr18 31063889 31064106 -54924828 - MIR SINE MIR -19 243 34 370 225 75 35 chr18 31064237 31064362 -54924572 - MIR SINE MIR -25 183 52 581 262 60 0 chr18 31064674 31064842 -54924092 - MER45A DNA AcHobo 0 178 1 1914 141 3 27 chr18 31065452 31065750 -54923184 - AluJo SINE Alu -21 291 1 2246 117 17 0 chr18 31065766 31066066 -54922868 - AluJb SINE Alu -7 305 1 2068 99 3 67 chr18 31066071 31066239 -54922695 - AluSx SINE Alu -15 297 120 387 0 0 0 chr18 31066239 31066282 -54922652 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2068 99 3 67 chr18 31066282 31066293 -54922641 - AluSx SINE Alu -192 120 110 2121 121 0 14 chr18 31066293 31066582 -54922352 - AluSg SINE Alu -25 285 1 2068 99 3 67 chr18 31066582 31066713 -54922221 - AluSx SINE Alu -202 110 6 2190 129 0 0 chr18 31067246 31067548 -54921386 - AluSg SINE Alu -8 302 1 233 301 11 21 chr18 31067899 31067992 -54920942 - MIR SINE MIR -101 107 16 261 83 0 0 chr18 31069018 31069054 -54919880 + (T)n Simple_repeat Simple_repeat 1 36 0 441 276 100 54 chr18 31069157 31069418 -54919516 - L1ME4a LINE L1 -69 6052 5780 287 214 286 39 chr18 31069717 31069871 -54919063 + MIR SINE MIR 1 192 -70 708 246 63 14 chr18 31070834 31071041 -54917893 - MIR SINE MIR -4 258 42 904 256 20 0 chr18 31071145 31071348 -54917586 + MER72 LTR ERV1 1 207 -515 560 250 0 69 chr18 31071408 31071568 -54917366 + MER72 LTR ERV1 239 387 -335 2140 167 63 164 chr18 31071568 31071917 -54917017 + LTR8A LTR ERV1 1 223 -504 2473 82 3 0 chr18 31071917 31072221 -54916713 + AluSp SINE Alu 1 305 -8 2140 167 63 164 chr18 31072221 31072680 -54916254 + LTR8A LTR ERV1 223 727 0 1718 185 40 9 chr18 31072680 31073009 -54915925 + MER72 LTR ERV1 384 722 0 306 50 0 0 chr18 31073136 31073176 -54915758 + (TG)n Simple_repeat Simple_repeat 2 41 0 304 283 71 0 chr18 31073308 31073407 -54915527 + MER34 LTR ERV1 21 126 -416 * 920 200 74 85 chr18 31073389 31073466 -54915468 + LTR29 LTR ERV1 137 213 -431 2032 137 3 23 chr18 31073466 31073765 -54915169 - AluSx SINE Alu -9 303 11 2251 126 0 3 chr18 31073770 31074071 -54914863 - AluSx SINE Alu -12 300 1 920 200 74 85 chr18 31074071 31074444 -54914490 + LTR29 LTR ERV1 217 644 0 278 294 92 50 chr18 31075160 31075279 -54913655 + L2 LINE L2 3148 3271 -1 1800 174 3 13 chr18 31076194 31076498 -54912436 + AluJb SINE Alu 1 301 -11 21 36 0 0 chr18 31076582 31076610 -54912324 + AT_rich Low_complexity Low_complexity 1 28 0 4039 110 30 5 chr18 31076613 31077250 -54911684 - MER39B LTR ERV1 0 653 1 243 338 0 0 chr18 31078132 31078203 -54910731 - L2 LINE L2 -86 3186 3116 245 223 9 116 chr18 31078956 31079068 -54909866 - MIR SINE MIR -113 149 50 186 236 0 0 chr18 31079896 31079951 -54908983 + (CA)n Simple_repeat Simple_repeat 2 56 0 2266 121 0 0 chr18 31080067 31080372 -54908562 - AluSq SINE Alu -8 305 1 1869 157 3 7 chr18 31080666 31080952 -54907982 - AluSx SINE Alu -13 299 15 829 207 6 0 chr18 31081040 31081209 -54907725 - FAM SINE Alu -5 170 1 1009 152 33 0 chr18 31081334 31081485 -54907449 - AluSg/x SINE Alu -17 295 140 2285 116 3 0 chr18 31081491 31081792 -54907142 - AluSx SINE Alu -10 302 1 231 152 0 0 chr18 31082340 31082386 -54906548 + GA-rich Low_complexity Low_complexity 2 47 0 531 139 6 48 chr18 31082406 31082572 -54906362 + (CA)n Simple_repeat Simple_repeat 1 159 0 270 133 0 0 chr18 31082767 31082812 -54906122 + MER81 DNA DNA 2 46 -68 911 83 0 0 chr18 31083167 31083276 -54905658 - AluSq/x SINE Alu -203 109 1 264 250 17 0 chr18 31083565 31083653 -54905281 - MIR SINE MIR -72 136 46 332 246 98 25 chr18 31083946 31084068 -54904866 + MIR3 SINE MIR 31 161 -47 360 223 14 128 chr18 31084420 31084568 -54904366 + MIR SINE MIR 96 226 -36 203 300 17 0 chr18 31085073 31085138 -54903796 + MIR SINE MIR 85 151 -57 423 0 0 0 chr18 31085684 31085731 -54903203 + (CA)n Simple_repeat Simple_repeat 2 48 0 833 278 25 82 chr18 31085912 31086268 -54902666 - L2 LINE L2 -54 3259 2924 429 309 7 7 chr18 31086530 31086669 -54902265 - MIR SINE MIR -116 146 8 785 268 46 35 chr18 31086921 31087182 -54901752 + MLT1J LTR MaLR 148 411 -100 699 283 5 24 chr18 31087189 31087394 -54901540 + MLT1J LTR MaLR 307 507 -4 231 287 77 70 chr18 31087999 31088115 -54900819 - MIR SINE MIR -72 190 71 2258 95 27 7 chr18 31088115 31088410 -54900524 + AluSq SINE Alu 1 301 -12 231 287 77 70 chr18 31088410 31088436 -54900498 - MIR SINE MIR -191 71 47 661 241 66 0 chr18 31088642 31088808 -54900126 - MER91B DNA MER1_type -12 178 2 219 351 68 7 chr18 31089386 31089534 -54899400 + MIR SINE MIR 106 262 0 541 298 135 2 chr18 31089636 31089858 -54899076 + L1ME4a LINE L1 5498 5745 -376 2104 105 35 3 chr18 31090197 31090483 -54898451 + AluSq SINE Alu 1 295 -18 22 0 0 0 chr18 31090825 31090847 -54898087 + AT_rich Low_complexity Low_complexity 1 22 0 959 158 0 30 chr18 31090875 31091040 -54897894 + FRAM SINE Alu 1 159 -17 421 319 115 31 chr18 31091557 31091880 -54897054 + L1ME4a LINE L1 5772 6121 0 531 227 6 14 chr18 31092253 31092436 -54896498 + MLT1J LTR MaLR 7 220 -291 2022 119 0 0 chr18 31092444 31092705 -54896229 + AluSg SINE Alu 1 261 -49 1402 119 5 20 chr18 31092879 31093081 -54895853 + AluJo SINE Alu 107 305 -7 2197 110 0 39 chr18 31093083 31093392 -54895542 + AluSx SINE Alu 2 298 -14 859 288 59 15 chr18 31093393 31093664 -54895270 + MLT1J LTR MaLR 217 499 -12 810 313 26 0 chr18 31093685 31093912 -54895022 - MIR SINE MIR -12 250 18 1037 111 0 7 chr18 31094005 31094149 -54894785 + AluSg/x SINE Alu 152 294 -16 452 275 51 20 chr18 31094168 31094348 -54894586 - MIR3 SINE MIR -62 146 3 668 295 53 16 chr18 31095145 31095389 -54893545 + MIR SINE MIR 9 261 -1 427 207 176 93 chr18 31095402 31095627 -54893307 - MIR SINE MIR -21 241 5 208 150 25 0 chr18 31096186 31096226 -54892708 + (CGG)n Simple_repeat Simple_repeat 3 43 0 274 278 0 11 chr18 31097331 31097421 -54891513 + (CA)n Simple_repeat Simple_repeat 2 90 0 180 275 0 0 chr18 31097719 31097759 -54891175 - MIR SINE MIR -66 142 103 2486 87 0 0 chr18 31098049 31098349 -54890585 - AluSg SINE Alu -10 300 1 25 95 0 0 chr18 31098352 31098426 -54890508 + AT_rich Low_complexity Low_complexity 1 74 0 791 104 8 0 chr18 31099446 31099571 -54889363 - L1PA13 LINE L1 -1 6162 6037 2315 92 0 6 chr18 31099587 31099924 -54889010 - L1PB1 LINE L1 -1 6150 5816 2173 92 44 0 chr18 31100315 31100609 -54888325 - AluSx SINE Alu -5 307 1 522 149 149 44 chr18 31100961 31101075 -54887859 + MER3 DNA MER1_type 1 126 -83 230 355 9 0 chr18 31102150 31102257 -54886677 + G-rich Low_complexity Low_complexity 4 111 0 2135 126 7 13 chr18 31103997 31104307 -54884627 - AluSx SINE Alu -2 310 3 332 278 86 19 chr18 31204383 31204545 -54784389 + MLT1J LTR MaLR 1 173 -338 963 281 275 21 chr18 31204589 31205341 -54783593 - L2 LINE L2 -411 2903 1961 614 129 0 21 chr18 31205512 31205605 -54783329 - AluJb SINE Alu -17 295 205 537 30 0 0 chr18 31205605 31205672 -54783262 + (TC)n Simple_repeat Simple_repeat 1 67 0 324 0 0 0 chr18 31205671 31205707 -54783227 + (CA)n Simple_repeat Simple_repeat 1 36 0 * 733 178 8 0 chr18 31205709 31205827 -54783107 - FLAM_C SINE Alu -14 119 1 503 276 64 16 chr18 31206002 31206252 -54782682 + L1M4b LINE L1 29 290 -6569 1034 237 12 40 chr18 31206777 31207175 -54781759 + L1M4b LINE L1 1265 1652 -5207 1838 161 6 28 chr18 31207185 31207502 -54781432 + AluJb SINE Alu 1 310 -2 237 235 0 0 chr18 31207540 31207591 -54781343 + L1ME LINE L1 5722 5772 -394 189 322 50 33 chr18 31209494 31209615 -54779319 + L2 LINE L2 2116 2238 -1076 1634 163 19 3 chr18 31209838 31210163 -54778771 - L1P LINE L1 -761 5385 5056 2499 87 127 12 chr18 31210165 31210567 -54778367 - LTR7 LTR ERV1 -2 448 1 3306 102 10 52 chr18 31210567 31211148 -54777786 - HERVH LTR ERV1 0 7713 7157 1356 174 15 0 chr18 31211141 31211405 -54777529 - HERVH LTR ERV1 -1697 6016 5749 * 9397 123 7 17 chr18 31211402 31214281 -54774653 - HERVH LTR ERV1 -1866 5225 1264 891 136 71 43 chr18 31215040 31215224 -54773710 - MER5A DNA MER1_type 0 189 1 2119 100 0 47 chr18 31215349 31215704 -54773230 + AluSx SINE Alu 1 341 0 7067 52 7 1 chr18 31215887 31217125 -54771809 + L1PA7 LINE L1 4911 6153 -1 187 311 219 0 chr18 31217961 31218080 -54770854 + L2 LINE L2 3168 3312 -1 2157 106 23 3 chr18 31218103 31218406 -54770528 + AluSc SINE Alu 1 309 0 196 250 0 19 chr18 31218559 31218611 -54770323 - L2 LINE L2 -79 3234 3184 241 301 137 27 chr18 31219028 31219247 -54769687 - L2 LINE L2 -658 2656 2414 318 146 73 0 chr18 31219926 31219981 -54768953 + L2 LINE L2 3255 3313 0 292 215 66 50 chr18 31220083 31220246 -54768688 - MER20B DNA MER1_type -4 215 54 448 329 111 66 chr18 31220525 31220948 -54767986 + L2 LINE L2 2812 3253 -19 414 100 0 0 chr18 31221239 31221299 -54767635 + (TTCC)n Simple_repeat Simple_repeat 1 60 0 2298 82 7 3 chr18 31221299 31221591 -54767343 - AluSx SINE Alu -19 293 1 1715 181 65 86 chr18 31222189 31222665 -54766269 + MLT1C LTR MaLR 1 466 -1 1449 196 100 16 chr18 31222791 31223220 -54765714 - Charlie4a DNA MER1_type -24 484 20 207 0 0 0 chr18 31223999 31224022 -54764912 + (T)n Simple_repeat Simple_repeat 1 23 0 270 0 0 0 chr18 31224671 31224701 -54764233 + (CA)n Simple_repeat Simple_repeat 2 31 0 298 246 16 33 chr18 31225809 31225931 -54763003 + C-rich Low_complexity Low_complexity 3 122 0 22 0 0 0 chr18 31226020 31226042 -54762892 + GC_rich Low_complexity Low_complexity 1 22 0 454 296 85 5 chr18 31226682 31226881 -54762053 + MIR SINE MIR 43 257 -5 3596 96 89 5 chr18 31227028 31227591 -54761343 - LTR66 LTR ERVL 0 610 1 4911 71 126 1 chr18 31227591 31228324 -54760610 - HERVL66 LTR ERVL 0 4329 3506 4653 66 51 6 chr18 31228326 31228976 -54759958 - HERVL66 LTR ERVL -997 3332 2654 * 12915 81 14 2 chr18 31228956 31230732 -54758202 - HERVL66 LTR ERVL -2532 1797 1 4147 91 13 37 chr18 31230732 31230960 -54757974 - LTR66 LTR ERVL 0 610 378 354 45 0 0 chr18 31230960 31231004 -54757930 + (CA)n Simple_repeat Simple_repeat 2 45 0 4147 91 13 37 chr18 31231004 31231400 -54757534 - LTR66 LTR ERVL -232 378 1 21 0 0 0 chr18 31232817 31232838 -54756096 + AT_rich Low_complexity Low_complexity 1 21 0 33 43 0 0 chr18 31233258 31233305 -54755629 + AT_rich Low_complexity Low_complexity 1 47 0 232 293 20 61 chr18 31233353 31233452 -54755482 - L2 LINE L2 -198 3074 2980 2322 96 30 33 chr18 31233990 31234353 -54754581 + THE1B LTR MaLR 1 362 -2 215 254 179 0 chr18 31235137 31235204 -54753730 + L3b LINE CR1 1143 1221 -362 2093 118 10 3 chr18 31235211 31235507 -54753427 + AluSq SINE Alu 1 298 -15 944 281 44 47 chr18 31236724 31237130 -54751804 + L2 LINE L2 2909 3313 0 27 29 0 0 chr18 31238070 31238104 -54750830 + AT_rich Low_complexity Low_complexity 1 34 0 24 0 0 0 chr18 31238520 31238544 -54750390 + AT_rich Low_complexity Low_complexity 1 24 0 2087 113 3 3 chr18 31238647 31238948 -54749986 - AluSg SINE Alu -9 301 1 185 245 0 38 chr18 31240842 31240895 -54748039 + MIR3 SINE MIR 113 163 -45 579 259 157 23 chr18 31240995 31241211 -54747723 - MIR SINE MIR -6 256 12 2442 59 13 0 chr18 31241275 31241582 -54747352 - AluY SINE Alu 0 311 1 28 48 0 0 chr18 31243153 31243195 -54745739 + AT_rich Low_complexity Low_complexity 1 42 0 194 319 26 35 chr18 31243198 31243311 -54745623 - L3b LINE CR1 -223 1360 1249 342 80 0 0 chr18 31243333 31243383 -54745551 + (TC)n Simple_repeat Simple_repeat 1 50 0 256 318 47 0 chr18 31243578 31243663 -54745271 + MIR SINE MIR 59 147 -115 2052 134 21 15 chr18 31244985 31245320 -54743614 + MER1B DNA MER1_type 1 337 0 2718 10 7 3 chr18 31247078 31247386 -54741548 - AluYb8 SINE Alu -9 309 1 1020 157 0 0 chr18 31249295 31249454 -54739480 - FRAM SINE Alu -7 159 1 716 237 41 31 chr18 31252562 31252756 -54736178 + MIR SINE MIR 8 203 -59 478 156 0 33 chr18 31252756 31252846 -54736088 - MLT1A1 LTR MaLR -278 87 1 349 368 56 19 chr18 31252936 31253202 -54735732 + L2 LINE L2 2590 2865 -449 241 349 48 24 chr18 31253255 31253381 -54735553 + L2 LINE L2 2931 3059 -213 26 30 0 0 chr18 31253796 31253829 -54735105 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr18 31254231 31254255 -54734679 + AT_rich Low_complexity Low_complexity 1 24 0 1973 208 26 8 chr18 31255014 31255403 -54733531 - MSTD LTR MaLR 0 396 1 2150 117 0 3 chr18 31256710 31257000 -54731934 - AluSq SINE Alu -20 293 5 23 108 0 0 chr18 31257915 31258008 -54730926 + AT_rich Low_complexity Low_complexity 1 93 0 2247 76 42 0 chr18 31258920 31259208 -54729726 - AluSp SINE Alu -13 300 1 404 298 76 19 chr18 31260247 31260405 -54728529 + MIR SINE MIR 51 217 -45 186 339 18 0 chr18 31260691 31260747 -54728187 + MIR SINE MIR 42 98 -110 * 218 378 36 49 chr18 31260735 31260960 -54727974 - L2 LINE L2 -98 3174 2953 215 261 15 15 chr18 31261012 31261077 -54727857 - MER5B DNA MER1_type -10 168 104 212 324 62 49 chr18 31261167 31261392 -54727542 - L2 LINE L2 -562 2752 2525 1901 176 3 0 chr18 31261691 31261998 -54726936 + AluJb SINE Alu 1 308 -4 247 182 21 175 chr18 31265163 31265306 -54723628 - MER91A DNA MER1_type -34 162 42 27 62 0 0 chr18 31266034 31266082 -54722852 + AT_rich Low_complexity Low_complexity 1 48 0 311 145 26 120 chr18 31266084 31266134 -54722800 - L1MC5 LINE L1 -36 7925 7890 2017 95 11 14 chr18 31266134 31266541 -54722393 + AluSg SINE Alu 1 406 0 311 145 26 120 chr18 31266541 31266606 -54722328 - L1MC5 LINE L1 -71 7890 7820 35 98 0 0 chr18 31267449 31267561 -54721373 + AT_rich Low_complexity Low_complexity 1 112 0 428 352 81 17 chr18 31268780 31269016 -54719918 - MIR SINE MIR 0 262 12 1847 88 6 97 chr18 31269021 31269341 -54719593 - AluSq SINE Alu -10 303 13 34 24 0 0 chr18 31270017 31270058 -54718876 + AT_rich Low_complexity Low_complexity 1 41 0 450 143 82 0 chr18 31270140 31270238 -54718696 - L1MA8 LINE L1 -6 6285 6180 26 30 0 0 chr18 31270459 31270492 -54718442 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr18 31270952 31270981 -54717953 + AT_rich Low_complexity Low_complexity 1 29 0 645 241 94 40 chr18 31271220 31271444 -54717490 + MIR SINE MIR 2 237 -25 234 0 0 0 chr18 31271520 31271546 -54717388 + (T)n Simple_repeat Simple_repeat 1 26 0 2151 107 9 0 chr18 31271646 31271965 -54716969 + L1PA11 LINE L1 5851 6172 -2 30 27 0 0 chr18 31271985 31272022 -54716912 + AT_rich Low_complexity Low_complexity 1 37 0 229 320 48 48 chr18 31272117 31272220 -54716714 - MIR3 SINE MIR -6 202 100 396 325 18 0 chr18 31272599 31272713 -54716221 + L2 LINE L2 3193 3308 -5 196 300 82 18 chr18 31273690 31273800 -54715134 + L3b LINE CR1 1121 1237 -346 636 309 34 38 chr18 31273813 31274078 -54714856 - L2 LINE L2 0 3313 3050 225 0 0 0 chr18 31274212 31274237 -54714697 + (A)n Simple_repeat Simple_repeat 1 25 0 940 291 61 12 chr18 31274671 31275015 -54713919 + LTR16C LTR ERVL 131 491 0 996 282 65 57 chr18 31275626 31275743 -54713191 + L2 LINE L2 2595 2710 -603 1656 201 3 0 chr18 31275743 31276036 -54712898 + AluJo SINE Alu 1 294 -18 996 282 65 57 chr18 31276036 31276591 -54712343 + L2 LINE L2 2710 3313 0 199 297 99 10 chr18 31276627 31276728 -54712206 - L2 LINE L2 -236 3036 2927 1950 112 67 28 chr18 31277027 31277384 -54711550 + THE1C LTR MaLR 5 375 0 215 237 17 17 chr18 31278031 31278090 -54710844 + GA-rich Low_complexity Low_complexity 1 59 0 310 299 140 36 chr18 31278090 31278311 -54710623 + HAL1 LINE L1 1102 1345 -1162 42996 33 22 1 chr18 31284905 31290933 -54698001 + L1PA2 LINE L1 2 6154 -1 565 258 159 22 chr18 31291337 31291608 -54697326 - L2 LINE L2 -3 3310 3003 216 280 156 78 chr18 31292018 31292415 -54696519 - L2 LINE L2 -18 3254 2827 22 56 0 0 chr18 31293078 31293114 -54695820 + AT_rich Low_complexity Low_complexity 1 36 0 629 160 9 0 chr18 31293434 31293540 -54695394 + U6 snRNA snRNA 1 107 0 1857 144 0 38 chr18 31295690 31296003 -54692931 + AluJb SINE Alu 1 301 -11 374 298 8 22 chr18 31296376 31296530 -54692404 + GA-rich Low_complexity Low_complexity 1 151 0 2210 112 7 3 chr18 31296674 31296979 -54691955 + AluSc SINE Alu 4 309 0 202 323 48 0 chr18 31297590 31297652 -54691282 + L3 LINE CR1 1511 1575 -2 254 347 83 21 chr18 31297880 31298046 -54690888 - MIR SINE MIR -48 214 38 186 411 55 30 chr18 31298095 31298331 -54690603 + L2 LINE L2 2810 3051 -221 1529 128 4 4 chr18 31298352 31298578 -54690356 - AluSq SINE Alu -87 226 1 26 0 0 0 chr18 31299326 31299352 -54689582 + AT_rich Low_complexity Low_complexity 1 26 0 519 322 128 25 chr18 31299417 31299855 -54689079 - L1ME4a LINE L1 -33 6088 5606 296 271 104 49 chr18 31299855 31299999 -54688935 + L2 LINE L2 3162 3313 0 433 347 80 0 chr18 31300120 31300296 -54688638 - MIR SINE MIR -71 191 2 2010 110 14 0 chr18 31301350 31301661 -54687273 + AluSx SINE Alu 1 315 0 200 33 0 33 chr18 31303033 31303063 -54685871 + (TATAA)n Simple_repeat Simple_repeat 2 30 0 216 167 42 0 chr18 31303351 31303399 -54685535 + (TA)n Simple_repeat Simple_repeat 1 50 0 336 282 48 0 chr18 31303432 31303535 -54685399 - MIR SINE MIR -106 156 49 507 339 22 6 chr18 31303558 31303738 -54685196 + MIR SINE MIR 6 188 -74 21 36 0 0 chr18 31306215 31306243 -54682691 + AT_rich Low_complexity Low_complexity 1 28 0 318 313 156 17 chr18 31307541 31307720 -54681214 + MIR SINE MIR 59 262 0 316 306 46 41 chr18 31307993 31308189 -54680745 + L1MC4a LINE L1 5734 5930 -1878 319 366 0 25 chr18 31308537 31308698 -54680236 + MARNA DNA Mariner 85 241 -345 279 54 0 0 chr18 31309208 31309245 -54679689 + (TTA)n Simple_repeat Simple_repeat 2 38 0 329 140 0 0 chr18 31309318 31309368 -54679566 + FLAM SINE Alu 81 130 -3 236 333 113 33 chr18 31309838 31310078 -54678856 - L2 LINE L2 -1845 1469 1211 239 208 178 50 chr18 31310998 31311099 -54677835 - L2 LINE L2 -1 3312 3199 311 301 9 0 chr18 31311339 31311452 -54677482 + (TG)n Simple_repeat Simple_repeat 2 115 0 22 56 0 0 chr18 31312350 31312386 -54676548 + AT_rich Low_complexity Low_complexity 1 36 0 203 250 31 0 chr18 31312501 31312565 -54676369 + T-rich Low_complexity Low_complexity 2 67 0 24 67 0 0 chr18 31312685 31312730 -54676204 + AT_rich Low_complexity Low_complexity 1 45 0 374 281 23 0 chr18 31312935 31313050 -54675884 - MIR SINE MIR -35 227 113 311 271 24 24 chr18 31313898 31313983 -54674951 + MIR3 SINE MIR 107 191 -17 215 292 14 42 chr18 31314587 31314622 -54674312 + GA-rich Low_complexity Low_complexity 3 37 -105 2395 75 13 0 chr18 31314622 31314927 -54674007 + AluSc SINE Alu 1 309 0 215 292 14 42 chr18 31314927 31315035 -54673899 + GA-rich Low_complexity Low_complexity 37 142 0 319 269 160 13 chr18 31315699 31315855 -54673079 + MIR3 SINE MIR 19 197 -11 2484 82 0 0 chr18 31316276 31316582 -54672352 - AluSc SINE Alu -3 306 1 432 246 77 8 chr18 31316678 31316808 -54672126 - MER91C DNA MER1_type 0 140 2 199 280 28 56 chr18 31318019 31318126 -54670808 - MIR SINE MIR -40 222 119 1209 151 58 62 chr18 31318683 31319008 -54669926 - MER33 DNA MER1_type 0 324 1 415 174 12 23 chr18 31318932 31319018 -54669916 - MER3 DNA MER1_type -87 122 38 1851 151 30 7 chr18 31319623 31319921 -54669013 + AluSx SINE Alu 1 305 -7 825 62 0 146 chr18 31322008 31322152 -54666782 - AluSg/x SINE Alu -20 292 170 1989 97 11 0 chr18 31322174 31322490 -54666444 - AluY SINE Alu 0 319 1 811 83 0 45 chr18 31322575 31322708 -54666226 - L1MB3 LINE L1 -1 6182 6056 831 148 60 0 chr18 31322732 31322881 -54666053 + MER58B DNA MER1_type 169 326 -15 353 275 20 67 chr18 31323400 31323549 -54665385 + L1ME4a LINE L1 5980 6121 0 2152 99 0 25 chr18 31324960 31325274 -54663660 + AluSx SINE Alu 1 306 -6 277 280 52 0 chr18 31326406 31326483 -54662451 - L1ME LINE L1 -543 5579 5501 24 53 0 0 chr18 31326580 31326618 -54662316 + AT_rich Low_complexity Low_complexity 1 38 0 2191 117 32 30 chr18 31327790 31327932 -54661002 + LTR56 LTR ERV1 66 206 -239 1368 120 96 0 chr18 31327932 31328140 -54660794 + MER30 DNA MER1_type 2 229 -1 2191 117 32 30 chr18 31328140 31328366 -54660568 + LTR56 LTR ERV1 206 435 -10 1571 199 0 7 chr18 31328968 31329135 -54659799 - AluJb SINE Alu -24 288 122 207 0 0 0 chr18 31329135 31329158 -54659776 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1571 199 0 7 chr18 31329158 31329271 -54659663 - AluJb SINE Alu -190 122 10 398 322 98 45 chr18 31329439 31329886 -54659048 + L1 LINE L1 4300 4770 -1376 297 0 0 0 chr18 31330545 31330578 -54658356 + (TG)n Simple_repeat Simple_repeat 2 34 0 211 319 103 35 chr18 31331724 31331840 -54657094 + L2 LINE L2 3149 3272 0 460 295 54 47 chr18 31332051 31332279 -54656655 - MIR SINE MIR -33 229 5 22 0 0 0 chr18 31332660 31332682 -54656252 + AT_rich Low_complexity Low_complexity 1 22 0 8472 194 47 23 chr18 31332687 31334024 -54654910 - L1MC1 LINE L1 -16 6317 5013 3484 51 0 0 chr18 31334024 31334456 -54654478 + L1PA5 LINE L1 5717 6148 -6 8472 194 47 23 chr18 31334456 31334790 -54654144 - L1MC1 LINE L1 -1320 5013 4688 1958 140 0 33 chr18 31334790 31335097 -54653837 - AluSx SINE Alu -13 299 3 8472 194 47 23 chr18 31335097 31336790 -54652144 - L1MC1 LINE L1 -1645 4688 2869 261 294 22 73 chr18 31336935 31337071 -54651863 + MIR SINE MIR 128 256 -6 243 269 124 27 chr18 31337249 31337506 -54651428 - L1MC5 LINE L1 -324 7637 7356 758 153 0 58 chr18 31337643 31337780 -54651154 - FLAM_C SINE Alu -4 129 1 180 0 0 0 chr18 31337780 31337800 -54651134 + (T)n Simple_repeat Simple_repeat 1 20 0 288 321 143 49 chr18 31338462 31338749 -54650185 + L2 LINE L2 2958 3271 -1 210 307 16 24 chr18 31339091 31339218 -54649716 + CT-rich Low_complexity Low_complexity 4 129 0 619 259 39 47 chr18 31340538 31340793 -54648141 + MER112 DNA MER1_type 2 254 -2 194 354 51 0 chr18 31341093 31341172 -54647762 - L2 LINE L2 -4 3268 3186 276 314 86 7 chr18 31343543 31343683 -54645251 + L1ME LINE L1 5599 5749 -372 382 192 115 0 chr18 31343913 31344017 -54644917 + L1ME4a LINE L1 6002 6117 -4 400 328 70 72 chr18 31344623 31345026 -54643908 + L2 LINE L2 2871 3272 0 21 0 0 0 chr18 31345184 31345205 -54643729 + AT_rich Low_complexity Low_complexity 1 21 0 4559 139 15 0 chr18 31345541 31346276 -54642658 - L1PA16 LINE L1 -4 6162 5417 227 248 38 0 chr18 31346510 31346615 -54642319 + (TA)n Simple_repeat Simple_repeat 1 109 0 22 56 0 0 chr18 31347329 31347365 -54641569 + AT_rich Low_complexity Low_complexity 1 36 0 24 32 0 0 chr18 31347673 31347704 -54641230 + AT_rich Low_complexity Low_complexity 1 31 0 548 265 67 55 chr18 31347707 31348150 -54640784 + L1MC4a LINE L1 5476 5904 -217 246 339 98 9 chr18 31348645 31348757 -54640177 - L2 LINE L2 -5 3267 3146 305 340 66 52 chr18 31349500 31349594 -54639340 + MIR SINE MIR 6 97 -165 1983 128 14 3 chr18 31349594 31349884 -54639050 + AluSx SINE Alu 1 293 -19 305 340 66 52 chr18 31349884 31350001 -54638933 + MIR SINE MIR 97 220 -42 2669 94 3 0 chr18 31350443 31350815 -54638119 - L1PA13 LINE L1 -1 6162 5790 24 111 0 0 chr18 31350858 31350966 -54637968 + AT_rich Low_complexity Low_complexity 1 108 0 32 57 0 0 chr18 31351104 31351157 -54637777 + AT_rich Low_complexity Low_complexity 1 53 0 26 0 0 0 chr18 31351361 31351387 -54637547 + AT_rich Low_complexity Low_complexity 1 26 0 2065 137 7 7 chr18 31351805 31352112 -54636822 + AluSx SINE Alu 1 307 -5 730 105 9 0 chr18 31352470 31352584 -54636350 + L1P5 LINE L1 5573 5687 -469 4264 147 7 20 chr18 31352608 31353321 -54635613 - L1PA16 LINE L1 -1 6165 5462 227 272 158 35 chr18 31353736 31353850 -54635084 + MIR3 SINE MIR 50 177 -31 413 311 8 0 chr18 31354216 31354335 -54634599 + L2 LINE L2 3194 3313 0 26 0 0 0 chr18 31354798 31354824 -54634110 + AT_rich Low_complexity Low_complexity 1 26 0 2974 137 31 2 chr18 31356308 31356819 -54632115 - L1MA3 LINE L1 -160 6145 5620 263 202 57 0 chr18 31358363 31358487 -54630447 + (TA)n Simple_repeat Simple_repeat 2 132 0 547 191 45 0 chr18 31358487 31358597 -54630337 - MIR SINE MIR -59 203 89 305 159 91 45 chr18 31358606 31358694 -54630240 - MER46A DNA MER2_type -90 146 55 399 154 0 0 chr18 31358608 31358673 -54630261 + Tigger4(Zombi) DNA MER2_type 1 65 -2666 227 200 0 0 chr18 31358707 31358747 -54630187 + Tigger4(Zombi) DNA MER2_type 2690 2729 -2 412 237 0 0 chr18 31358751 31358827 -54630107 - MIR SINE MIR -184 78 3 855 143 6 25 chr18 31360106 31360267 -54628667 + L1MA3 LINE L1 6148 6305 0 339 317 200 7 chr18 31360855 31361000 -54627934 - MER5B DNA MER1_type -4 174 2 2330 110 0 0 chr18 31361744 31362054 -54626880 + AluSg SINE Alu 1 310 0 1683 196 0 3 chr18 31362903 31363218 -54625716 - AluJo SINE Alu 0 314 1 23 54 0 0 chr18 31363239 31363276 -54625658 + AT_rich Low_complexity Low_complexity 1 37 0 296 233 55 27 chr18 31363324 31363397 -54625537 + L2 LINE L2 3239 3313 0 391 275 113 36 chr18 31364476 31364698 -54624236 - L1ME4a LINE L1 -173 5948 5710 416 315 60 15 chr18 31365555 31365755 -54623179 + L2 LINE L2 2849 3057 -215 2198 121 3 3 chr18 31370770 31371075 -54617859 - AluSx SINE Alu -7 305 1 445 273 36 100 chr18 31372044 31372164 -54616770 + MIR SINE MIR 29 126 -136 2094 110 30 3 chr18 31372164 31372465 -54616469 + AluSx SINE Alu 1 309 -3 445 273 36 100 chr18 31372465 31372593 -54616341 + MIR SINE MIR 126 261 -1 235 408 53 0 chr18 31372789 31372865 -54616069 + L2 LINE L2 3141 3220 -52 1057 139 75 11 chr18 31372904 31373091 -54615843 - AluJb SINE Alu -103 209 11 181 278 37 0 chr18 31373751 31373805 -54615129 - L2 LINE L2 -14 3299 3244 21 36 0 0 chr18 31374185 31374213 -54614721 + AT_rich Low_complexity Low_complexity 1 28 0 2174 94 4 0 chr18 31374247 31374522 -54614412 - AluSp SINE Alu -37 276 1 747 258 41 32 chr18 31374573 31374794 -54614140 - MER58A DNA MER1_type -1 223 1 2055 181 75 3 chr18 31375124 31375510 -54613424 + MSTB LTR MaLR 1 414 -12 231 401 14 14 chr18 31375828 31375970 -54612964 + L2 LINE L2 2771 2912 -402 227 181 56 14 chr18 31376884 31376956 -54611978 + (TTTA)n Simple_repeat Simple_repeat 2 76 0 627 208 5 137 chr18 31376974 31377186 -54611748 - MER58B DNA MER1_type -15 326 26 227 204 0 0 chr18 31379281 31379325 -54609609 + (AAATG)n Simple_repeat Simple_repeat 3 46 0 374 261 159 0 chr18 31380547 31380685 -54608249 + MIR SINE MIR 46 205 -57 23 97 0 0 chr18 31383566 31383638 -54605296 + AT_rich Low_complexity Low_complexity 1 72 0 204 384 47 27 chr18 31383910 31384168 -54604766 - L2 LINE L2 -171 3101 2839 1967 226 48 60 chr18 31384171 31384987 -54603947 - Charlie2 DNA MER1_type -202 2660 1855 417 321 116 13 chr18 31384991 31385215 -54603719 - Charlie2 DNA MER1_type -2540 322 76 789 89 0 9 chr18 31386389 31386501 -54602433 - HY1 scRNA scRNA -1 111 1 2042 119 0 35 chr18 31386850 31387161 -54601773 + AluSg SINE Alu 1 300 -10 374 301 52 23 chr18 31389464 31389637 -54599297 - MIR3 SINE MIR -1 207 30 1517 213 0 14 chr18 31393704 31393990 -54594944 - AluJo SINE Alu -21 291 10 187 323 0 16 chr18 31394123 31394185 -54594749 - MIR3 SINE MIR -12 196 136 465 280 38 30 chr18 31395652 31395784 -54593150 + MER5A DNA MER1_type 57 189 0 2216 107 10 3 chr18 31395849 31396147 -54592787 - AluSx SINE Alu -10 302 3 903 199 174 8 chr18 31396501 31396742 -54592192 - MLT1D LTR MaLR -15 490 210 484 234 187 18 chr18 31396750 31397023 -54591911 - L1ME LINE L1 -491 5671 5353 42 57 0 0 chr18 31397031 31397101 -54591833 + AT_rich Low_complexity Low_complexity 1 70 0 302 287 180 13 chr18 31397193 31397493 -54591441 - L1ME LINE L1 -896 5250 4901 30 59 0 0 chr18 31397549 31397600 -54591334 + AT_rich Low_complexity Low_complexity 1 51 0 1299 286 96 27 chr18 31397600 31398672 -54590262 - L1ME LINE L1 -1286 4860 3715 * 1479 243 39 48 chr18 31398669 31399342 -54589592 - L1ME2 LINE L1 -237 5925 5413 5598 112 3 3 chr18 31399356 31399479 -54589455 - L1PA16 LINE L1 -10 6156 6034 1962 132 7 3 chr18 31399479 31399774 -54589160 - AluSg SINE Alu -14 296 1 5598 112 3 3 chr18 31399774 31401107 -54587827 - L1PA16 LINE L1 -131 6035 4706 897 152 0 7 chr18 31401111 31401256 -54587678 - MLT1A1 LTR MaLR -221 144 1 234 370 11 0 chr18 31401682 31401774 -54587160 + MIR SINE MIR 45 137 -71 37 0 0 0 chr18 31402050 31402087 -54586847 + AT_rich Low_complexity Low_complexity 1 37 0 2377 96 0 0 chr18 31403365 31403666 -54585268 - AluSq SINE Alu -12 301 1 2093 113 0 13 chr18 31403847 31404158 -54584776 + AluY SINE Alu 1 307 -4 2888 128 2 14 chr18 31404283 31404704 -54584230 - MER1A DNA MER1_type -105 424 9 14331 212 11 23 chr18 31404730 31406047 -54582887 - L1P5 LINE L1 -605 6262 4931 2167 138 3 0 chr18 31406047 31406359 -54582575 - AluSq SINE Alu 0 313 1 14331 212 11 23 chr18 31406359 31407581 -54581353 - L1P5 LINE L1 -1936 4931 3696 1935 164 3 0 chr18 31407581 31407880 -54581054 - AluSx SINE Alu -12 300 1 14331 212 11 23 chr18 31407880 31409311 -54579623 - L1P5 LINE L1 -3171 3696 2338 598 84 11 11 chr18 31409313 31409408 -54579526 + (TCC)n Simple_repeat Simple_repeat 2 96 0 457 76 15 0 chr18 31409419 31409485 -54579449 - MER41A LTR ERV1 -88 466 400 12006 134 16 5 chr18 31409485 31411389 -54577545 - L1P5 LINE L1 -4592 2271 347 1373 162 55 4 chr18 31411390 31411643 -54577291 - L1P5 LINE L1 -6596 267 2 4834 200 59 14 chr18 31411656 31412403 -54576531 - L1M3 LINE L1 -728 5440 4615 2407 94 0 3 chr18 31412403 31412711 -54576223 + AluSc SINE Alu 1 307 -2 4834 200 59 14 chr18 31412711 31413244 -54575690 - L1M3 LINE L1 -1553 4615 4108 1566 98 12 28 chr18 31413211 31413466 -54575468 + THE1C-int LTR MaLR 1325 1575 -5 * 826 159 0 21 chr18 31413472 31413617 -54575317 + THE1C LTR MaLR 1 142 -233 207 227 41 103 chr18 31414201 31414298 -54574636 - L2 LINE L2 -46 3226 3136 21 0 0 0 chr18 31418956 31418977 -54569957 + AT_rich Low_complexity Low_complexity 1 21 0 1019 192 56 0 chr18 31420173 31420371 -54568563 + MER3 DNA MER1_type 1 209 0 975 106 69 16 chr18 31421216 31421404 -54567530 - L1MA4 LINE L1 -6 6294 6097 351 251 201 43 chr18 31421780 31421879 -54567055 + L1MC4 LINE L1 7689 7771 -271 1822 153 10 3 chr18 31421879 31422173 -54566761 - AluSx SINE Alu -16 296 1 351 251 201 43 chr18 31422173 31422376 -54566558 + L1MC4 LINE L1 7771 8039 -3 689 276 37 14 chr18 31422387 31422604 -54566330 + MER58A DNA MER1_type 2 223 -1 37 18 0 18 chr18 31422731 31422750 -54566184 + AT_rich Low_complexity Low_complexity 1 19 -35 1659 151 0 17 chr18 31422750 31423041 -54565893 + AluSq SINE Alu 1 286 -27 37 18 0 18 chr18 31423041 31423076 -54565858 + AT_rich Low_complexity Low_complexity 19 54 0 23 0 0 0 chr18 31423089 31423112 -54565822 + AT_rich Low_complexity Low_complexity 1 23 0 945 173 0 17 chr18 31423279 31423452 -54565482 + AluSg/x SINE Alu 122 291 -21 24 0 0 0 chr18 31423452 31423476 -54565458 + AT_rich Low_complexity Low_complexity 1 24 0 25 31 0 0 chr18 31423489 31423521 -54565413 + AT_rich Low_complexity Low_complexity 1 32 0 287 291 48 48 chr18 31424120 31424223 -54564711 - L2 LINE L2 -31 3241 3139 1729 176 13 3 chr18 31424677 31424984 -54563950 + AluJb SINE Alu 3 312 0 392 33 0 50 chr18 31425379 31425439 -54563495 - L1PA8 LINE L1 -13 6159 6103 3539 60 6 4 chr18 31425439 31425908 -54563026 + L1PA7 LINE L1 5462 5938 -224 387 259 136 0 chr18 31426732 31426894 -54562040 - L1MC4 LINE L1 -68 7974 7791 502 274 175 21 chr18 31426953 31427485 -54561449 + L1MC4a LINE L1 7018 7572 -236 * 823 59 84 8 chr18 31427466 31427619 -54561315 + L1PA8 LINE L1 6025 6186 0 3006 184 6 10 chr18 31427790 31428457 -54560477 - L1 LINE L1 -1341 4805 4170 21 0 0 0 chr18 31429134 31429155 -54559779 + AT_rich Low_complexity Low_complexity 1 21 0 431 306 99 47 chr18 31429472 31429877 -54559057 + L1MC4a LINE L1 4604 5029 -1117 2554 39 13 3 chr18 31429916 31430221 -54558713 + AluY SINE Alu 1 308 -3 422 259 63 114 chr18 31430406 31431088 -54557846 + L1MC4a LINE L1 5254 5900 -1908 213 363 79 11 chr18 31431374 31431564 -54557370 - L2 LINE L2 -1047 2267 2065 993 372 105 25 chr18 31431668 31432440 -54556494 + L2 LINE L2 2023 2856 -458 283 293 155 0 chr18 31432533 31432649 -54556285 + L2 LINE L2 3180 3313 0 555 16 0 0 chr18 31433405 31433469 -54555465 + (TA)n Simple_repeat Simple_repeat 1 64 0 332 365 0 24 chr18 31434062 31434188 -54554746 + MER5A DNA MER1_type 63 185 -4 349 301 34 41 chr18 31434379 31434525 -54554409 + MIR SINE MIR 7 151 -111 232 333 59 38 chr18 31435159 31435345 -54553589 - L2 LINE L2 -189 3083 2894 212 175 63 0 chr18 31435872 31435935 -54552999 + (TG)n Simple_repeat Simple_repeat 2 68 0 312 246 33 123 chr18 31436477 31436599 -54552335 - L2 LINE L2 0 3272 3162 24 96 0 0 chr18 31436831 31436904 -54552030 + AT_rich Low_complexity Low_complexity 1 73 0 251 71 24 0 chr18 31437694 31437736 -54551198 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1532 119 127 0 chr18 31437739 31437983 -54550951 - AluSc SINE Alu -30 279 5 5932 96 0 1 chr18 31437991 31438806 -54550128 - L1PA8 LINE L1 0 6172 5359 2057 69 0 18 chr18 31440167 31440442 -54548492 + AluYa5 SINE Alu 39 308 -3 1472 139 24 114 chr18 31440969 31441301 -54547633 - AluYb8 SINE Alu -16 302 1 900 232 101 0 chr18 31441631 31441838 -54547096 + MIR SINE MIR 34 261 -1 1570 213 13 3 chr18 31442612 31442913 -54546021 + AluJo SINE Alu 1 304 -8 2221 107 0 13 chr18 31443865 31444164 -54544770 + AluSx SINE Alu 1 295 -17 11658 184 7 12 chr18 31444685 31446936 -54541998 + L1P LINE L1 1906 4145 -2001 2096 87 18 17 chr18 31446936 31447337 -54541597 + LTR7 LTR ERV1 1 448 -2 1136 123 0 0 chr18 31447339 31447510 -54541424 + HERVH LTR ERV1 1 171 -7542 1370 106 5 0 chr18 31447610 31447799 -54541135 + THE1A LTR MaLR 166 355 0 277 310 103 27 chr18 31448189 31448373 -54540561 - MIR SINE MIR -17 245 48 276 344 23 16 chr18 31448975 31449103 -54539831 + MER5B DNA MER1_type 1 129 -49 26 50 0 0 chr18 31449736 31449776 -54539158 + AT_rich Low_complexity Low_complexity 1 40 0 364 282 70 28 chr18 31449776 31449918 -54539016 - MIR SINE MIR -110 152 5 265 353 86 7 chr18 31450028 31450167 -54538767 - MIR3 SINE MIR -27 181 32 579 250 121 45 chr18 31450385 31450741 -54538193 + L1MCc LINE L1 12 394 -6029 393 39 0 0 chr18 31450752 31450803 -54538131 + (CA)n Simple_repeat Simple_repeat 2 52 0 1385 275 42 36 chr18 31451094 31451924 -54537010 + L1MCc LINE L1 845 1693 -4892 2077 262 37 7 chr18 31451939 31452538 -54536396 + L1ME1 LINE L1 5523 6139 -27 21 0 0 0 chr18 31453969 31453990 -54534944 + AT_rich Low_complexity Low_complexity 1 21 0 424 316 110 23 chr18 31454347 31454565 -54534369 + MIR SINE MIR 26 262 0 509 241 151 22 chr18 31455610 31455817 -54533117 + MIR SINE MIR 15 241 -21 298 320 94 8 chr18 31455915 31456043 -54532891 - MIR SINE MIR -111 151 13 22 35 0 0 chr18 31456224 31456253 -54532681 + AT_rich Low_complexity Low_complexity 1 29 0 678 200 15 0 chr18 31456253 31456383 -54532551 - FLAM_A SINE Alu 0 133 2 607 295 18 124 chr18 31456776 31457356 -54531578 + L2 LINE L2 2754 3272 0 227 257 0 30 chr18 31457995 31458096 -54530838 + (TTAG)n Simple_repeat Simple_repeat 4 101 0 271 360 66 7 chr18 31458179 31458315 -54530619 - MIR SINE MIR -43 219 76 639 202 0 0 chr18 31458430 31458539 -54530395 + LTR25 LTR ERV1 248 356 -438 318 224 0 71 chr18 31458542 31458640 -54530294 + MER61E LTR ERV1 99 189 -380 1139 148 56 0 chr18 31458714 31458910 -54530024 + MER61E LTR ERV1 341 547 -22 501 51 0 39 chr18 31459173 31459251 -54529683 - AluSp/q SINE Alu -7 306 232 331 313 56 21 chr18 31459252 31459396 -54529538 + MIR SINE MIR 92 240 -22 5114 144 63 25 chr18 31460335 31461611 -54527323 + L1MA8 LINE L1 4790 6126 -165 2232 138 0 0 chr18 31461611 31461922 -54527012 + AluSx SINE Alu 1 311 -1 5114 144 63 25 chr18 31461922 31462094 -54526840 + L1MA8 LINE L1 6126 6290 -1 287 287 0 138 chr18 31464935 31465083 -54523851 + MER5A DNA MER1_type 5 130 -59 2106 119 3 0 chr18 31465083 31465411 -54523523 + AluSq SINE Alu 1 329 0 287 287 0 138 chr18 31465411 31465464 -54523470 + MER5A DNA MER1_type 130 189 0 2493 31 41 0 chr18 31465699 31465990 -54522944 - AluY SINE Alu -8 303 1 1791 172 3 7 chr18 31465990 31466287 -54522647 - AluJb SINE Alu -16 296 1 251 359 126 13 chr18 31468467 31468626 -54520308 - L3 LINE CR1 -46 1531 1355 256 293 43 100 chr18 31468932 31469072 -54519862 - MIR SINE MIR -13 249 118 277 288 88 16 chr18 31469157 31469282 -54519652 + MER94 DNA DNA 1 134 0 184 305 21 116 chr18 31470974 31471164 -54517770 - MER5A DNA MER1_type -5 184 13 805 290 55 0 chr18 31471523 31471740 -54517194 + MIR SINE MIR 34 262 0 27 49 0 0 chr18 31472023 31472064 -54516870 + AT_rich Low_complexity Low_complexity 1 41 0 2878 269 77 38 chr18 31472873 31474046 -54514888 - L2 LINE L2 -459 2855 1637 799 276 38 5 chr18 31474385 31474595 -54514339 + MIR SINE MIR 19 235 -27 199 313 175 30 chr18 31474718 31474884 -54514050 - L2 LINE L2 -212 3060 2871 2580 125 28 16 chr18 31475903 31476326 -54512608 - MSTA LTR MaLR 0 428 1 25 31 0 0 chr18 31476850 31476882 -54512052 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr18 31477917 31477938 -54510996 + AT_rich Low_complexity Low_complexity 1 21 0 182 200 0 0 chr18 31480516 31480551 -54508383 + L2 LINE L2 3279 3313 0 844 234 128 0 chr18 31481638 31481865 -54507069 + MIR SINE MIR 7 262 0 184 380 62 0 chr18 31481860 31481973 -54506961 + L2 LINE L2 3176 3295 -18 * 1803 254 67 51 chr18 31482376 31482668 -54506266 + L1ME3A LINE L1 5453 5739 -431 2974 118 2 2 chr18 31482668 31483101 -54505833 + MER57B LTR ERV1 2 434 0 1803 254 67 51 chr18 31483101 31483514 -54505420 + L1ME3A LINE L1 5739 6169 -1 219 146 0 0 chr18 31484676 31484717 -54504217 + (TC)n Simple_repeat Simple_repeat 2 42 0 22 0 0 0 chr18 31485175 31485197 -54503737 + AT_rich Low_complexity Low_complexity 1 22 0 183 156 0 0 chr18 31485467 31485499 -54503435 + GA-rich Low_complexity Low_complexity 1 32 0 2466 39 3 0 chr18 31486323 31486637 -54502297 - AluY SINE Alu 0 315 1 22 35 0 0 chr18 31487613 31487642 -54501292 + AT_rich Low_complexity Low_complexity 1 29 0 210 291 64 57 chr18 31488107 31488248 -54500686 + MIR SINE MIR 84 225 -37 2230 101 0 3 chr18 31488498 31488795 -54500139 - AluSx SINE Alu -16 296 1 527 274 64 29 chr18 31488806 31489010 -54499924 + MIR SINE MIR 48 258 -4 27 0 0 0 chr18 31489407 31489434 -54499500 + AT_rich Low_complexity Low_complexity 1 27 0 224 48 71 48 chr18 31489450 31489534 -54499400 + (TA)n Simple_repeat Simple_repeat 1 86 0 21 0 0 0 chr18 31489613 31489634 -54499300 + AT_rich Low_complexity Low_complexity 1 21 0 1628 180 7 3 chr18 31489637 31489931 -54499003 + AluSx SINE Alu 1 295 -17 333 301 16 11 chr18 31490102 31490285 -54498649 - L1M4 LINE L1 -1808 4338 4155 * 752 221 15 121 chr18 31490280 31490611 -54498323 + L1ME2 LINE L1 5855 6150 -14 1535 255 96 70 chr18 31492174 31492831 -54496103 - HAL1 LINE L1 -33 2474 1785 1691 124 90 28 chr18 31492831 31493121 -54495813 - AluSx SINE Alu -4 308 1 1535 255 96 70 chr18 31493121 31493393 -54495541 - HAL1 LINE L1 -722 1785 1521 1857 104 11 14 chr18 31493407 31493694 -54495240 + L1PB1 LINE L1 5863 6148 -3 30 0 0 0 chr18 31493725 31493755 -54495179 + AT_rich Low_complexity Low_complexity 1 30 0 2075 134 3 0 chr18 31493993 31494283 -54494651 - AluSx SINE Alu -21 291 1 719 300 4 0 chr18 31494561 31494794 -54494140 - Tigger8 DNA MER2_type -123 543 310 521 342 218 20 chr18 31494922 31495574 -54493360 + HAL1 LINE L1 53 833 -1674 * 1274 238 113 30 chr18 31495572 31496077 -54492857 + HAL1 LINE L1 1491 2037 -470 373 303 110 25 chr18 31496265 31496576 -54492358 + L2 LINE L2 2920 3271 -1 332 257 44 110 chr18 31496576 31496712 -54492222 + L2 LINE L2 3146 3272 0 278 98 20 0 chr18 31497720 31497771 -54491163 + (GA)n Simple_repeat Simple_repeat 1 52 0 4677 180 31 36 chr18 31498378 31499831 -54489103 + L1MA9 LINE L1 4837 6282 -30 356 293 63 90 chr18 31500374 31500865 -54488069 - L1M4c LINE L1 -5095 1289 812 577 281 80 40 chr18 31501678 31501980 -54486954 - MARNA DNA Mariner -123 463 150 372 289 33 8 chr18 31502107 31502228 -54486706 + MIR SINE MIR 30 153 -55 1145 212 153 55 chr18 31504158 31504629 -54484305 + MLT2B1 LTR ERVL 1 517 -3 1982 126 0 69 chr18 31504818 31505151 -54483783 + AluSx SINE Alu 1 310 -2 2278 116 3 0 chr18 31506426 31506737 -54482197 - AluJb SINE Alu 0 312 1 485 105 0 13 chr18 31507989 31508065 -54480869 - MADE1 DNA Mariner 0 80 6 327 197 61 61 chr18 31508135 31508267 -54480667 + L1ME4a LINE L1 5990 6121 0 21 0 0 0 chr18 31510147 31510168 -54478766 + AT_rich Low_complexity Low_complexity 1 21 0 183 331 71 8 chr18 31510432 31510559 -54478375 + L2 LINE L2 3098 3232 -81 813 179 0 26 chr18 31512370 31512521 -54476413 + FRAM SINE Alu 29 175 -1 1737 171 18 0 chr18 31512858 31513139 -54475795 + AluJb SINE Alu 1 286 -26 421 233 175 48 chr18 31513287 31513476 -54475458 - MIR SINE MIR -33 229 17 1849 169 55 3 chr18 31513577 31513925 -54475009 - MER47A DNA MER2_type 0 366 1 6058 60 0 14 chr18 31514181 31514963 -54473971 + L1PA8 LINE L1 5400 6170 -2 758 252 11 95 chr18 31515530 31515731 -54473203 + MIR SINE MIR 13 190 -72 1648 166 0 47 chr18 31515731 31515855 -54473079 + AluJo SINE Alu 1 129 -255 2318 92 0 0 chr18 31515855 31516148 -54472786 - AluSg SINE Alu -17 293 1 1648 166 0 47 chr18 31516148 31516421 -54472513 + AluJo SINE Alu 129 384 0 758 252 11 95 chr18 31516421 31516480 -54472454 + MIR SINE MIR 190 252 -10 1920 131 37 3 chr18 31516852 31517149 -54471785 - AluSq SINE Alu -4 309 3 220 211 118 53 chr18 31517905 31517981 -54470953 + L2 LINE L2 2401 2481 -833 366 23 0 0 chr18 31518559 31518602 -54470332 + (TG)n Simple_repeat Simple_repeat 1 43 0 1513 167 49 26 chr18 31518602 31518866 -54470068 - AluJb SINE Alu -33 279 10 360 266 142 9 chr18 31519479 31519592 -54469342 + MER5A DNA MER1_type 59 186 -3 23 0 0 0 chr18 31520069 31520092 -54468842 + AT_rich Low_complexity Low_complexity 1 23 0 1914 122 22 11 chr18 31520436 31520743 -54468191 - AluSx SINE Alu 0 310 1 494 311 81 42 chr18 31521988 31522322 -54466612 + MLT1J LTR MaLR 130 476 -35 1279 230 167 9 chr18 31522618 31522966 -54465968 + MSTB1 LTR MaLR 4 406 -26 2164 122 20 0 chr18 31522987 31523291 -54465643 - AluSx SINE Alu -2 310 1 270 89 0 44 chr18 31523291 31523330 -54465604 + MSTB1 LTR MaLR 390 426 0 298 312 28 9 chr18 31576663 31576772 -54412162 - L3 LINE CR1 -3 1574 1464 975 156 8 132 chr18 31576970 31577220 -54411714 - MER20 DNA MER1_type 0 219 1 810 180 108 0 chr18 31577529 31577723 -54411211 - L1ME3A LINE L1 -18 6152 5938 974 311 53 53 chr18 31577845 31578407 -54410527 + L2 LINE L2 2224 2785 -529 320 285 262 5 chr18 31578468 31578682 -54410252 + L2 LINE L2 2957 3225 -88 237 221 15 29 chr18 31578878 31578946 -54409988 - MLT1K LTR MaLR 0 588 522 606 296 147 37 chr18 31579036 31579411 -54409523 - MLT1L LTR MaLR -199 416 1 2748 209 66 19 chr18 31579485 31580107 -54408827 + L1MD3 LINE L1 7345 7995 0 351 184 0 87 chr18 31580120 31580223 -54408711 + L1MC5 LINE L1 7834 7927 -34 460 290 148 0 chr18 31580394 31580556 -54408378 + MER5A DNA MER1_type 4 189 0 2246 93 3 10 chr18 31580892 31581194 -54407740 - AluY SINE Alu -11 300 1 182 286 36 0 chr18 31582176 31582232 -54406702 - L2 LINE L2 -1907 1407 1350 386 250 73 24 chr18 31582301 31582425 -54406509 + MER94 DNA DNA 5 134 0 513 219 244 6 chr18 31582660 31582824 -54406110 + MER3 DNA MER1_type 5 207 -2 2197 171 12 55 chr18 31582879 31583369 -54405565 + L1MA4 LINE L1 5821 6289 -11 225 231 244 0 chr18 31584210 31584288 -54404646 + L1MC/D LINE L1 5688 5784 -2024 1940 157 0 22 chr18 31585066 31585378 -54403556 + AluJb SINE Alu 3 307 -5 438 200 83 25 chr18 31586080 31586200 -54402734 - MER94 DNA DNA 0 134 8 422 264 238 17 chr18 31586216 31586451 -54402483 + L2 LINE L2 2329 2615 -699 227 184 0 0 chr18 31586507 31586545 -54402389 + U2 snRNA snRNA 1 38 -150 27 0 0 0 chr18 31587042 31587069 -54401865 + AT_rich Low_complexity Low_complexity 1 27 0 891 137 25 43 chr18 31587251 31587412 -54401522 - MER58A DNA MER1_type 0 162 5 1095 156 94 47 chr18 31588174 31588449 -54400485 + MER33 DNA MER1_type 2 289 -35 2428 80 0 0 chr18 31588904 31589203 -54399731 + AluY SINE Alu 1 299 -12 921 247 37 12 chr18 31589417 31589663 -54399271 - MIR SINE MIR -13 249 3 1660 156 0 28 chr18 31591047 31591329 -54397605 + AluJb SINE Alu 30 303 -9 216 327 107 57 chr18 31591388 31591547 -54397387 - MER5A DNA MER1_type -15 174 8 2201 85 0 27 chr18 31591640 31591934 -54397000 + AluSg SINE Alu 1 286 -24 507 209 0 0 chr18 31592486 31592572 -54396362 + Tigger3(Golem) DNA MER2_type 3 88 -2941 * 3613 136 49 15 chr18 31592571 31593182 -54395752 + Tigger3(Golem) DNA MER2_type 2397 3028 -1 3286 205 58 36 chr18 31593382 31593504 -54395430 + L1ME1 LINE L1 5349 5467 -699 1606 201 113 3 chr18 31593504 31593833 -54395101 - MLT1A1 LTR MaLR 0 365 1 3286 205 58 36 chr18 31593833 31594214 -54394720 + L1ME1 LINE L1 5467 5878 -288 2067 128 10 3 chr18 31594214 31594512 -54394422 + AluSx SINE Alu 1 300 -12 3286 205 58 36 chr18 31594512 31594803 -54394131 + L1ME1 LINE L1 5878 6161 -5 23 0 0 0 chr18 31595103 31595126 -54393808 + AT_rich Low_complexity Low_complexity 1 23 0 229 265 0 0 chr18 31596173 31596215 -54392719 + (TA)n Simple_repeat Simple_repeat 1 45 -23 1957 148 0 3 chr18 31596215 31596499 -54392435 - AluJo SINE Alu -26 286 4 229 265 0 0 chr18 31596499 31596524 -54392410 + (TA)n Simple_repeat Simple_repeat 44 68 0 1875 217 16 14 chr18 31597874 31598238 -54390696 - MLT1A1 LTR MaLR 0 365 1 279 0 0 0 chr18 31598692 31598723 -54390211 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 316 317 57 8 chr18 31598823 31598946 -54389988 - MIR3 SINE MIR -9 199 71 1330 189 15 42 chr18 31598971 31599236 -54389698 + AluJo SINE Alu 1 258 -54 2191 133 10 0 chr18 31599763 31600072 -54388862 - AluSx SINE Alu 0 312 1 2396 86 3 0 chr18 31600293 31600594 -54388340 - AluSx SINE Alu -10 302 1 1978 97 90 0 chr18 31601298 31601577 -54387357 + AluSc SINE Alu 1 304 -5 694 226 0 0 chr18 31601588 31601712 -54387222 + FLAM_A SINE Alu 2 125 -8 342 244 11 0 chr18 31602549 31602639 -54386295 - MIR SINE MIR -6 256 166 2543 55 0 0 chr18 31603122 31603413 -54385521 + AluY SINE Alu 1 291 -20 2057 122 34 0 chr18 31603506 31603802 -54385132 + AluSx SINE Alu 1 306 -6 334 256 114 59 chr18 31603803 31604022 -54384912 + L1MC4 LINE L1 7801 8031 -11 243 232 84 21 chr18 31604067 31604162 -54384772 + L1MC5 LINE L1 7807 7907 -54 232 233 0 0 chr18 31604235 31604278 -54384656 + L2 LINE L2 3189 3231 -41 519 222 9 0 chr18 31605033 31605141 -54383793 + L2 LINE L2 3199 3307 -6 4127 103 0 13 chr18 31605506 31606039 -54382895 + MER1A DNA MER1_type 2 527 0 293 301 11 32 chr18 31606215 31606308 -54382626 + L2 LINE L2 3214 3304 -9 263 226 0 0 chr18 31607596 31607649 -54381285 - MLT1J LTR MaLR -9 502 450 894 256 70 41 chr18 31607694 31608010 -54380924 - MLT1J LTR MaLR -145 366 42 552 321 133 20 chr18 31608812 31609114 -54379820 - MLT1I LTR MaLR -3 406 71 1983 159 3 3 chr18 31609368 31609669 -54379265 + AluJb SINE Alu 1 301 -11 841 274 68 12 chr18 31609680 31610554 -54378380 + L1M4 LINE L1 2346 3341 -2805 293 146 281 11 chr18 31610969 31611058 -54377876 - L1MC4 LINE L1 0 8042 7930 1027 236 119 6 chr18 31611108 31611426 -54377508 - L1MC4 LINE L1 -229 7813 7460 194 0 0 37 chr18 31611470 31611497 -54377437 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2462 84 0 0 chr18 31613179 31613488 -54375446 + AluSx SINE Alu 1 309 -3 204 175 263 0 chr18 31613710 31613767 -54375167 + L2 LINE L2 3234 3305 -8 304 250 26 0 chr18 31614761 31614837 -54374097 - MER53 DNA DNA -110 79 2 631 194 123 0 chr18 31615015 31615170 -54373764 - MER34B LTR ERV1 0 565 392 1003 286 102 18 chr18 31615187 31615568 -54373366 - MER57B LTR ERV1 0 434 22 1538 158 76 50 chr18 31615586 31615928 -54373006 - MER34C LTR ERV1 -191 394 44 808 219 55 38 chr18 31616214 31616452 -54372482 - L1MEc LINE L1 -3525 2690 2449 1903 136 55 107 chr18 31616465 31616497 -54372437 + MER57A LTR ERV1 6 38 -365 2148 104 54 0 chr18 31616497 31616794 -54372140 - AluSp SINE Alu 0 313 1 1903 136 55 107 chr18 31616794 31617138 -54371796 + MER57A LTR ERV1 38 360 -43 1912 112 12 71 chr18 31617138 31617460 -54371474 - AluSx SINE Alu -9 303 1 1903 136 55 107 chr18 31617460 31617502 -54371432 + MER57A LTR ERV1 360 403 0 724 278 63 34 chr18 31617503 31617913 -54371021 - L1MEc LINE L1 -3914 2482 2061 2596 176 143 42 chr18 31617916 31618062 -54370872 - MER67C LTR ERV1 -3 707 577 2179 97 44 0 chr18 31618062 31618360 -54370574 + AluY SINE Alu 1 311 0 2069 114 27 0 chr18 31618365 31618662 -54370272 + AluSp SINE Alu 1 305 -8 2596 176 143 42 chr18 31618662 31619151 -54369783 - MER67C LTR ERV1 -136 574 1 343 194 16 0 chr18 31619168 31619230 -54369704 - MER3 DNA MER1_type -128 81 19 4237 135 43 31 chr18 31619250 31619968 -54368966 + LTR8A LTR ERV1 1 727 0 381 195 35 23 chr18 31619971 31620058 -54368876 - L1MEc LINE L1 -4331 2065 1978 786 274 9 14 chr18 31620347 31620559 -54368375 + LTR33 LTR ERVL 1 211 -310 1383 151 13 4 chr18 31620674 31620899 -54368035 + LTR26E LTR ERV1 1 227 -395 302 336 51 36 chr18 31622253 31622390 -54366544 - L2 LINE L2 -8 3264 3126 2373 145 40 36 chr18 31622584 31622959 -54365975 + MSTB LTR MaLR 1 381 -45 2224 75 11 0 chr18 31622959 31623259 -54365675 + AluSx SINE Alu 1 303 0 2373 145 40 36 chr18 31623259 31623302 -54365632 + MSTB LTR MaLR 381 422 -4 2491 133 9 76 chr18 31623929 31624123 -54364811 + L1PB4 LINE L1 5728 5934 -222 1928 62 4 0 chr18 31624123 31624350 -54364584 + AluSp SINE Alu 78 305 -8 2491 133 9 76 chr18 31624350 31624566 -54364368 + L1PB4 LINE L1 5934 6106 -50 1649 195 14 3 chr18 31624566 31624858 -54364076 + AluJo SINE Alu 1 295 -17 2491 133 9 76 chr18 31624858 31624904 -54364030 + L1PB4 LINE L1 6106 6154 -2 251 294 71 40 chr18 31625030 31625156 -54363778 + L2 LINE L2 3181 3310 -3 1947 200 49 58 chr18 31625459 31626033 -54362901 - L1ME2 LINE L1 -11 6153 5585 203 0 37 0 chr18 31626097 31626124 -54362810 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1704 133 12 16 chr18 31626126 31626381 -54362553 - AluJo SINE Alu -28 284 31 2301 113 0 3 chr18 31627501 31627810 -54361124 + AluSx SINE Alu 1 308 -4 327 265 15 53 chr18 31628207 31628339 -54360595 - MIR SINE MIR -8 254 128 183 305 68 0 chr18 31629112 31629171 -54359763 - MIR3 SINE MIR -6 202 140 233 309 18 18 chr18 31629217 31629327 -54359607 - L3b LINE CR1 -154 1429 1320 1525 287 90 19 chr18 31631128 31631714 -54357220 - MLT2E LTR ERVL 0 628 1 813 139 0 0 chr18 31633154 31633269 -54355665 + FLAM_C SINE Alu 7 121 -22 23 33 0 0 chr18 31633269 31633299 -54355635 + AT_rich Low_complexity Low_complexity 1 30 0 3020 104 21 0 chr18 31634135 31634558 -54354376 + MSTB1 LTR MaLR 1 432 0 2228 128 3 3 chr18 31634949 31635261 -54353673 - AluSx SINE Alu 0 312 1 1850 107 0 4 chr18 31635347 31635590 -54353344 + AluSq SINE Alu 1 242 -71 198 103 0 0 chr18 31635599 31635628 -54353306 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 1738 167 21 10 chr18 31636151 31636439 -54352495 - AluJo SINE Alu -18 294 4 3315 146 16 44 chr18 31636614 31637222 -54351712 + L1MC2 LINE L1 5674 6264 -80 1485 184 0 73 chr18 31639441 31639556 -54349378 + AluJo SINE Alu 1 123 -189 2287 112 3 6 chr18 31639556 31639869 -54349065 - AluSx SINE Alu 0 312 1 1485 184 0 73 chr18 31639869 31640080 -54348854 + AluJo SINE Alu 123 303 -9 24 53 0 0 chr18 31640108 31640146 -54348788 + AT_rich Low_complexity Low_complexity 1 38 0 2254 69 36 13 chr18 31640538 31640842 -54348092 - AluY SINE Alu 0 311 1 237 306 93 0 chr18 31641367 31641475 -54347459 - MIR SINE MIR -26 236 119 321 293 92 5 chr18 31642869 31643036 -54345898 - MIR SINE MIR -3 205 25 1032 177 21 5 chr18 31643073 31643259 -54345675 - MER5A DNA MER1_type 0 189 1 1994 142 50 36 chr18 31643592 31643951 -54344983 + THE1B LTR MaLR 1 364 0 317 239 14 0 chr18 31644175 31644246 -54344688 - L2 LINE L2 0 3272 3201 512 157 10 17 chr18 31644479 31644740 -54344194 + AluJo SINE Alu 17 312 0 298 376 61 25 chr18 31645256 31645697 -54343237 - L2 LINE L2 -527 2787 2331 180 321 73 42 chr18 31646648 31646813 -54342121 - L2 LINE L2 -2892 422 253 1705 179 79 8 chr18 31647964 31648345 -54340589 - Charlie4a DNA MER1_type -87 421 14 1635 229 40 12 chr18 31648563 31648991 -54339943 + L1ME1 LINE L1 5720 6159 -7 293 338 22 7 chr18 31649362 31649498 -54339436 - L3 LINE CR1 -24 1553 1416 369 0 0 0 chr18 31650043 31650084 -54338850 + (CA)n Simple_repeat Simple_repeat 2 42 0 38 22 0 0 chr18 31650099 31650144 -54338790 + AT_rich Low_complexity Low_complexity 1 45 0 6056 82 2 1 chr18 31650640 31651428 -54337506 - L1PA11 LINE L1 -7 6167 5379 1711 57 82 0 chr18 31653832 31654076 -54334858 - L1MA1 LINE L1 0 6302 6039 416 330 65 48 chr18 31654190 31654340 -54334594 + L3 LINE CR1 629 775 -802 2396 101 24 27 chr18 31654340 31654716 -54334218 - THE1C LTR MaLR 0 375 1 416 330 65 48 chr18 31654716 31655153 -54333781 + L3 LINE CR1 775 1226 -351 670 259 32 11 chr18 31655359 31655544 -54333390 - Charlie8 DNA MER1_type -2217 200 12 189 353 18 54 chr18 31655847 31656014 -54332920 - MIR SINE MIR -70 192 32 285 182 0 0 chr18 31656410 31656465 -54332469 + (CA)n Simple_repeat Simple_repeat 2 56 0 777 136 9 4 chr18 31656729 31656957 -54331977 + AluJb SINE Alu 2 311 -1 234 91 0 0 chr18 31657022 31657055 -54331879 + (CA)n Simple_repeat Simple_repeat 2 34 0 286 42 42 0 chr18 31657391 31657439 -54331495 + (TTTTG)n Simple_repeat Simple_repeat 1 50 0 2273 115 0 0 chr18 31660366 31660661 -54328273 + AluSq SINE Alu 1 295 -18 733 289 87 7 chr18 31661188 31661465 -54327469 + MER46C DNA MER2_type 31 329 -9 737 258 5 5 chr18 31661516 31661706 -54327228 - MIR SINE MIR -1 261 72 211 270 80 60 chr18 31662440 31662540 -54326394 - L2 LINE L2 -4 3268 3167 2330 103 3 0 chr18 31662827 31663128 -54325806 - AluSx SINE Alu -10 302 1 2390 115 0 3 chr18 31664894 31665207 -54323727 - AluSx SINE Alu 0 312 1 234 347 118 6 chr18 31665545 31665715 -54323219 - L2 LINE L2 -190 3082 2894 471 260 142 32 chr18 31665751 31666174 -54322760 - MLT1J2 LTR MaLR -12 428 1 394 176 27 0 chr18 31666598 31666672 -54322262 - MER116 DNA Mariner -3 77 2 2169 113 7 3 chr18 31666812 31667105 -54321829 + AluSx SINE Alu 1 294 -18 1812 148 72 43 chr18 31667114 31667459 -54321475 - MLT2D LTR ERVL -59 355 1 1732 180 70 21 chr18 31668398 31668786 -54320148 - MLT1C LTR MaLR -2 465 59 2780 174 41 91 chr18 31668887 31669442 -54319492 + LTR8A LTR ERV1 30 541 -186 1977 166 3 0 chr18 31669442 31669750 -54319184 - AluJo SINE Alu -3 309 1 2780 174 41 91 chr18 31669750 31669929 -54319005 + LTR8A LTR ERV1 541 727 0 180 0 0 0 chr18 31670189 31670209 -54318725 + (TC)n Simple_repeat Simple_repeat 2 21 0 189 74 0 0 chr18 31670212 31670239 -54318695 + (CA)n Simple_repeat Simple_repeat 2 28 0 270 79 0 0 chr18 31670240 31670278 -54318656 + MLT2C1 LTR ERVL 360 397 0 1231 87 29 25 chr18 31670364 31670702 -54318232 + L1PB1 LINE L1 5368 5794 -357 260 73 0 0 chr18 31670689 31670730 -54318204 - L1P5 LINE L1 -360 5791 5751 * 2292 101 9 15 chr18 31670807 31671145 -54317789 + L1PB1 LINE L1 5815 6150 -1 4748 100 26 6 chr18 31671161 31671840 -54317094 + L1MA1 LINE L1 5505 6197 -105 1289 214 206 0 chr18 31672222 31672581 -54316353 + MER63B DNA MER1_type 4 436 0 289 86 259 17 chr18 31673580 31673638 -54315296 + MLT1A1 LTR MaLR 1 72 -293 1235 183 27 5 chr18 31673639 31673858 -54315076 - MER46A DNA MER2_type -4 232 9 1097 176 63 123 chr18 31673860 31674178 -54314756 + MLT1A1 LTR MaLR 67 365 0 564 222 69 7 chr18 31674190 31674334 -54314600 - L1MD3 LINE L1 -10 7985 7833 239 191 0 0 chr18 31674341 31674383 -54314551 - L1MD3 LINE L1 -279 7716 7675 803 222 30 10 chr18 31674384 31674705 -54314229 - MLT1C LTR MaLR 0 467 112 1402 146 45 0 chr18 31674759 31675005 -54313929 - L1MB2 LINE L1 -26 6145 5889 532 258 16 0 chr18 31675007 31675131 -54313803 - MLT1C LTR MaLR -341 126 1 925 186 22 11 chr18 31675132 31675315 -54313619 - L1MC4 LINE L1 -457 7585 7401 995 240 33 17 chr18 31675529 31676005 -54312929 - MER90 LTR ERV1 0 614 57 422 345 15 10 chr18 31676063 31676269 -54312665 - L2 LINE L2 -779 2535 2329 270 143 0 0 chr18 31677054 31677096 -54311838 + L2 LINE L2 3258 3299 -14 246 297 196 9 chr18 31677992 31678211 -54310723 + MLT1K LTR MaLR 329 588 0 23 33 0 0 chr18 31678456 31678486 -54310448 + AT_rich Low_complexity Low_complexity 1 30 0 562 273 8 91 chr18 31678795 31679037 -54309897 + MIR SINE MIR 23 244 -18 1113 198 14 9 chr18 31679323 31679731 -54309203 - MLT1D LTR MaLR 0 505 5 276 252 162 27 chr18 31679745 31679856 -54309078 - L2 LINE L2 0 3272 3147 464 166 20 44 chr18 31679856 31680078 -54308856 + GA-rich Low_complexity Low_complexity 1 216 0 226 271 0 0 chr18 31680078 31680126 -54308808 + polypurine Low_complexity Low_complexity 2 49 0 181 321 28 28 chr18 31680196 31680302 -54308632 - L2 LINE L2 -224 3048 2943 223 323 0 0 chr18 31680619 31680681 -54308253 + MIR3 SINE MIR 138 199 -9 1284 246 50 21 chr18 31681015 31681433 -54307501 - L1MC/D LINE L1 -2000 5808 5379 993 146 11 11 chr18 31681449 31681627 -54307307 - L1MD1 LINE L1 0 6242 6065 180 0 0 0 chr18 31681708 31681728 -54307206 + (A)n Simple_repeat Simple_repeat 1 20 0 286 229 34 122 chr18 31681763 31681968 -54306966 + L1MDa LINE L1 116 302 -6238 3069 75 41 16 chr18 31682037 31682474 -54306460 - L1PA8 LINE L1 -17 6155 5708 236 353 108 0 chr18 31682779 31682881 -54306053 + L2 LINE L2 3142 3254 -18 21 0 0 0 chr18 31683694 31683715 -54305219 + AT_rich Low_complexity Low_complexity 1 21 0 2064 50 0 0 chr18 31683849 31684090 -54304844 - AluY SINE Alu -2 309 69 1693 151 4 22 chr18 31684417 31684695 -54304239 + AluSx SINE Alu 1 273 -39 219 265 24 114 chr18 31684732 31684943 -54303991 - L2 LINE L2 -404 2910 2719 469 179 24 0 chr18 31685020 31685104 -54303830 + FLAM_A SINE Alu 41 126 -16 249 331 164 35 chr18 31685155 31685466 -54303468 - L2 LINE L2 -783 2531 2181 637 252 0 0 chr18 31685481 31685628 -54303306 - MER3 DNA MER1_type -56 153 7 2402 51 0 3 chr18 31685935 31686230 -54302704 - AluY SINE Alu -15 296 3 300 258 72 93 chr18 31686470 31686664 -54302270 - MIR SINE MIR -32 230 41 204 40 0 0 chr18 31687353 31687378 -54301556 + (CA)n Simple_repeat Simple_repeat 2 26 0 2126 136 46 3 chr18 31692265 31692588 -54296346 + MER1B DNA MER1_type 1 337 0 365 186 0 14 chr18 31694617 31694687 -54294247 + Tigger2 DNA MER2_type 1 69 -2649 * 2403 118 48 36 chr18 31694677 31695118 -54293816 + Tigger2 DNA MER2_type 2273 2718 0 324 0 0 0 chr18 31695232 31695268 -54293666 + (T)n Simple_repeat Simple_repeat 1 36 0 1860 85 0 22 chr18 31695353 31695624 -54293310 + AluY SINE Alu 2 266 -45 896 203 28 56 chr18 31695725 31696011 -54292923 + Tigger2 DNA MER2_type 2429 2706 -12 315 0 0 0 chr18 31696128 31696163 -54292771 + (T)n Simple_repeat Simple_repeat 1 35 0 2561 62 0 3 chr18 31696248 31696556 -54292378 + AluY SINE Alu 2 308 -3 407 233 6 19 chr18 31696672 31696831 -54292103 + GA-rich Low_complexity Low_complexity 3 159 0 21 0 0 0 chr18 31697097 31697118 -54291816 + AT_rich Low_complexity Low_complexity 1 21 0 221 333 88 19 chr18 31697257 31697416 -54291518 - MIR SINE MIR -72 190 21 1075 69 0 0 chr18 31697900 31698031 -54290903 - AluSg SINE Alu -179 131 1 24 53 0 0 chr18 31698152 31698190 -54290744 + AT_rich Low_complexity Low_complexity 1 38 0 228 339 78 17 chr18 31698861 31698976 -54289958 + MIR SINE MIR 23 144 -64 22 56 0 0 chr18 31699053 31699089 -54289845 + AT_rich Low_complexity Low_complexity 1 36 0 655 213 157 20 chr18 31699095 31699395 -54289539 - HAL1 LINE L1 -46 2461 2121 403 292 65 0 chr18 31699657 31699811 -54289123 - HAL1 LINE L1 -764 1743 1580 434 157 0 12 chr18 31699896 31699979 -54288955 + LTR1 LTR ERV1 160 241 -544 318 250 229 29 chr18 31700291 31700531 -54288403 + L2 LINE L2 2824 3111 -202 180 121 30 0 chr18 31700594 31700627 -54288307 + L2 LINE L2 3216 3249 -64 480 289 94 87 chr18 31700648 31701029 -54287905 - HAL1 LINE L1 -1745 762 379 336 281 104 36 chr18 31701177 31701369 -54287565 - HAL1 LINE L1 -2302 205 1 2180 94 34 3 chr18 31701642 31701939 -54286995 + AluSc SINE Alu 4 309 0 200 0 100 0 chr18 31702244 31702274 -54286660 + A-rich Low_complexity Low_complexity 3 35 0 1200 128 0 0 chr18 31702342 31702506 -54286428 + AluSg/x SINE Alu 128 291 -21 1729 192 125 18 chr18 31702659 31703302 -54285632 + L1ME LINE L1 4800 5521 -645 2245 121 0 0 chr18 31703491 31703798 -54285136 - AluSg1 SINE Alu -2 307 1 355 250 0 0 chr18 31703999 31704067 -54284867 - L3 LINE CR1 -3 1574 1507 2378 76 0 0 chr18 31704925 31705213 -54283721 + AluY SINE Alu 1 288 -23 471 378 80 18 chr18 31705642 31705981 -54282953 - L2 LINE L2 -509 2805 2446 366 315 169 14 chr18 31708213 31708432 -54280502 - L3b LINE CR1 -133 1450 1198 252 300 50 12 chr18 31708778 31708858 -54280076 + MER5A DNA MER1_type 51 133 -56 883 219 0 6 chr18 31708860 31709024 -54279910 - FRAM SINE Alu -16 160 1 1367 79 0 6 chr18 31709398 31709575 -54279359 - AluSg/x SINE Alu -47 263 88 1936 135 11 0 chr18 31709991 31710265 -54278669 - AluSx SINE Alu -22 290 14 234 354 0 0 chr18 31710949 31711028 -54277906 - L2 LINE L2 -8 3305 3227 343 263 119 0 chr18 31712234 31712352 -54276582 - MER94 DNA DNA -1 133 2 485 292 112 9 chr18 31712546 31712779 -54276155 + MIR SINE MIR 6 262 0 198 0 0 0 chr18 31716044 31716066 -54272868 + (TGAA)n Simple_repeat Simple_repeat 2 23 0 2577 121 13 43 chr18 31716154 31716671 -54272263 + L1P4 LINE L1 5224 5726 -440 266 281 10 31 chr18 31716871 31716967 -54271967 - MER5A DNA MER1_type -1 188 95 465 263 38 19 chr18 31717242 31717402 -54271532 + LTR67 LTR ERVL 389 551 -6 2381 59 7 0 chr18 31717458 31717745 -54271189 - AluY SINE Alu -22 289 1 2318 75 0 0 chr18 31718455 31718749 -54270185 - AluY SINE Alu -17 294 1 2187 111 9 19 chr18 31720110 31720425 -54268509 - AluSx SINE Alu 0 312 1 670 231 16 16 chr18 31722625 31722811 -54266123 + MER5A DNA MER1_type 1 186 -3 30 69 0 0 chr18 31723160 31723218 -54265716 + AT_rich Low_complexity Low_complexity 1 58 0 311 323 99 22 chr18 31723246 31723478 -54265456 + L1ME1 LINE L1 5003 5252 -894 477 288 104 60 chr18 31723484 31724130 -54264804 + L1ME1 LINE L1 5261 5934 -230 23 0 0 0 chr18 31724492 31724515 -54264419 + AT_rich Low_complexity Low_complexity 1 23 0 227 282 42 28 chr18 31725370 31725441 -54263493 + MIR SINE MIR 28 99 -163 2018 130 33 19 chr18 31726620 31726927 -54262007 - AluJo SINE Alu -1 311 1 626 227 199 14 chr18 31727240 31727658 -54261276 + HAL1 LINE L1 1046 1540 -967 459 269 199 34 chr18 31727708 31728035 -54260899 + HAL1 LINE L1 1988 2368 -139 2390 89 3 0 chr18 31729241 31729545 -54259389 + AluY SINE Alu 1 305 -6 204 275 107 46 chr18 31729936 31730067 -54258867 + MIR3 SINE MIR 58 196 -12 205 427 47 7 chr18 31730429 31730579 -54258355 + L2 LINE L2 3112 3267 -5 748 264 99 63 chr18 31730608 31731071 -54257863 + MLT1J LTR MaLR 32 511 0 2243 113 0 10 chr18 31732155 31732464 -54256470 + AluY SINE Alu 1 306 -5 26 0 0 0 chr18 31733113 31733139 -54255795 + AT_rich Low_complexity Low_complexity 1 26 0 235 269 152 55 chr18 31733827 31733972 -54254962 + MIR3 SINE MIR 18 176 -32 1983 100 25 11 chr18 31734532 31734812 -54254122 + AluSc SINE Alu 14 297 -12 2240 125 8 3 chr18 31734818 31735170 -54253764 + L1PA16 LINE L1 5804 6157 -9 1956 98 3 63 chr18 31735416 31735734 -54253200 + AluSx SINE Alu 1 299 -13 187 309 0 0 chr18 31735787 31735829 -54253105 - L2 LINE L2 -19 3253 3212 464 130 39 0 chr18 31736006 31736083 -54252851 - U6 snRNA snRNA -27 80 1 1929 148 0 3 chr18 31736758 31737055 -54251879 - AluJb SINE Alu -16 296 1 6678 63 65 0 chr18 31737462 31738370 -54250564 - L1PA7 LINE L1 -2 6152 5225 952 214 19 33 chr18 31739352 31739562 -54249372 - MIR SINE MIR -50 212 6 192 205 26 0 chr18 31740306 31740345 -54248589 - MIR SINE MIR -6 256 217 705 214 78 15 chr18 31740439 31740615 -54248319 + MLT1D LTR MaLR 21 184 -283 273 89 0 0 chr18 31740615 31740660 -54248274 + (CA)n Simple_repeat Simple_repeat 1 45 0 705 214 78 15 chr18 31740660 31740869 -54248065 + MLT1D LTR MaLR 184 467 0 352 277 123 101 chr18 31744847 31745222 -54243712 - L3 LINE CR1 -8 1569 1187 236 296 41 31 chr18 31745238 31745336 -54243598 + MIR SINE MIR 37 135 -73 196 367 10 0 chr18 31746370 31746468 -54242466 + L2 LINE L2 2254 2352 -962 198 214 169 22 chr18 31746501 31746590 -54242344 + L2 LINE L2 2290 2391 -923 182 241 172 78 chr18 31747605 31747721 -54241213 + L2 LINE L2 2934 3060 -212 1283 106 142 28 chr18 31748735 31748989 -54239945 + Charlie1 DNA MER1_type 1728 2010 -751 213 353 8 8 chr18 31751264 31751386 -54237548 + G-rich Low_complexity Low_complexity 3 124 0 344 292 162 0 chr18 31751496 31751681 -54237253 - L1MC/D LINE L1 -2220 5588 5374 30 69 0 0 chr18 31752054 31752112 -54236822 + AT_rich Low_complexity Low_complexity 1 58 0 640 237 16 16 chr18 31752461 31752647 -54236287 - MER5A DNA MER1_type -3 186 1 1928 135 3 20 chr18 31754849 31755146 -54233788 + AluJo SINE Alu 1 292 -20 430 144 21 62 chr18 31755358 31755455 -54233479 - MER53 DNA DNA -96 93 1 1005 181 30 10 chr18 31756098 31756297 -54232637 + MER3 DNA MER1_type 1 203 -6 448 296 112 5 chr18 31756405 31756628 -54232306 + MER102b DNA MER1_type 86 332 -9 366 392 0 26 chr18 31756796 31756990 -54231944 + MIR SINE MIR 40 228 -34 1658 193 4 0 chr18 31757029 31757309 -54231625 - AluJb SINE Alu -31 281 1 1369 83 10 63 chr18 31757764 31757969 -54230965 + AluSq SINE Alu 1 194 -119 26 104 0 0 chr18 31758177 31758273 -54230661 + GC_rich Low_complexity Low_complexity 1 96 0 285 299 96 32 chr18 31758942 31759129 -54229805 + MIR SINE MIR 34 232 -30 274 167 28 69 chr18 31759832 31759904 -54229030 + MIR SINE MIR 172 240 -22 230 133 0 0 chr18 31760869 31760914 -54228020 + LTR66 LTR ERVL 395 439 -171 21 57 0 0 chr18 31761080 31761115 -54227819 + AT_rich Low_complexity Low_complexity 1 35 0 466 251 28 73 chr18 31761313 31761492 -54227442 - MIR SINE MIR -78 184 14 2119 101 31 3 chr18 31762090 31762376 -54226558 + AluSg SINE Alu 1 294 -16 2086 128 3 7 chr18 31762753 31763058 -54225876 - AluSx SINE Alu -8 304 1 2139 116 0 3 chr18 31763075 31763398 -54225536 - AluSq SINE Alu 0 322 1 2661 54 34 3 chr18 31763432 31763781 -54225153 + L1PA8 LINE L1 5800 6159 -13 492 18 0 0 chr18 31763917 31763974 -54224960 + (TA)n Simple_repeat Simple_repeat 1 57 0 865 281 16 10 chr18 31764814 31765117 -54223817 - L1ME LINE L1 -495 5675 5371 315 291 192 29 chr18 31765131 31765475 -54223459 + L1M4 LINE L1 3904 4303 -1843 303 270 74 70 chr18 31766111 31766315 -54222619 + L1M4 LINE L1 4300 4507 -1639 1935 166 17 0 chr18 31766315 31766604 -54222330 + AluJb SINE Alu 1 294 -18 303 270 74 70 chr18 31766604 31766669 -54222265 + L1M4 LINE L1 4507 4570 -1576 22 0 0 0 chr18 31767916 31767938 -54220996 + AT_rich Low_complexity Low_complexity 1 22 0 377 300 56 50 chr18 31768788 31768968 -54219966 + HAL1b LINE L1 13 193 -1155 21 89 0 0 chr18 31769112 31769168 -54219766 + AT_rich Low_complexity Low_complexity 1 56 0 494 309 126 39 chr18 31769351 31769516 -54219418 - L1MEc LINE L1 -4613 1697 1548 1985 183 48 97 chr18 31769516 31769615 -54219319 - MER87 LTR ERV1 0 541 439 1612 171 21 18 chr18 31769615 31769896 -54219038 + AluJb SINE Alu 1 282 -30 1985 183 48 97 chr18 31769896 31769912 -54219022 - MER87 LTR ERV1 -102 439 424 183 42 0 0 chr18 31769912 31769936 -54218998 + (GA)n Simple_repeat Simple_repeat 2 25 0 1985 183 48 97 chr18 31769936 31770388 -54218546 - MER87 LTR ERV1 -117 424 1 494 309 126 39 chr18 31770388 31770611 -54218323 - L1MEc LINE L1 -4762 1548 1275 437 210 37 92 chr18 31770616 31770887 -54218047 - L1MEc LINE L1 -4905 1214 959 2024 129 6 22 chr18 31770974 31771285 -54217649 + AluSx SINE Alu 1 306 -6 502 247 112 81 chr18 31771285 31771417 -54217517 + HAL1b LINE L1 266 393 -955 2046 113 12 44 chr18 31771417 31771737 -54217197 + AluSx SINE Alu 1 310 -2 502 247 112 81 chr18 31771737 31771891 -54217043 + HAL1b LINE L1 393 541 -807 2372 97 3 3 chr18 31771891 31772201 -54216733 - AluSx SINE Alu -2 310 1 502 247 112 81 chr18 31772201 31772540 -54216394 + HAL1b LINE L1 541 911 -437 252 239 0 0 chr18 31772730 31772801 -54216133 + L1ME3 LINE L1 6085 6155 -7 336 314 87 44 chr18 31772833 31773062 -54215872 + L1MC/D LINE L1 2489 2727 -3419 306 0 0 0 chr18 31773063 31773097 -54215837 + (TG)n Simple_repeat Simple_repeat 1 34 0 2260 92 0 0 chr18 31773102 31773383 -54215551 - AluY SINE Alu -30 281 1 270 265 27 119 chr18 31773441 31773626 -54215308 + MLT1I LTR MaLR 240 407 -2 315 285 131 60 chr18 31773643 31773704 -54215230 + L1MC/D LINE L1 4801 4856 -1290 2610 137 28 14 chr18 31773704 31774126 -54214808 + MSTA LTR MaLR 1 428 0 315 285 131 60 chr18 31774126 31774516 -54214418 + L1MC/D LINE L1 4856 5284 -862 370 319 56 30 chr18 31774795 31775065 -54213869 + L1MC/D LINE L1 5529 5805 -2003 29 0 0 0 chr18 31776732 31776761 -54212173 + AT_rich Low_complexity Low_complexity 1 29 0 1987 106 67 14 chr18 31776849 31777131 -54211803 - AluSx SINE Alu -15 297 1 1429 170 73 126 chr18 31777874 31778013 -54210921 + LTR37B LTR ERV1 1 146 -322 2181 123 3 0 chr18 31778013 31778315 -54210619 - AluSq SINE Alu -10 303 1 1429 170 73 126 chr18 31778315 31778669 -54210265 + LTR37B LTR ERV1 146 468 0 214 178 22 0 chr18 31778694 31778739 -54210195 + MIR SINE MIR 215 260 -2 228 254 0 28 chr18 31778801 31778872 -54210062 + (CATATA)n Simple_repeat Simple_repeat 4 72 0 198 138 52 0 chr18 31778883 31778941 -54209993 + (TA)n Simple_repeat Simple_repeat 2 62 0 2219 108 3 10 chr18 31778977 31779284 -54209650 + AluSx SINE Alu 1 305 -7 207 100 0 0 chr18 31779846 31779876 -54209058 + (T)n Simple_repeat Simple_repeat 1 30 0 391 232 50 66 chr18 31780497 31780678 -54208256 - L1ME4a LINE L1 -171 5950 5773 207 362 171 7 chr18 31780692 31780844 -54208090 - MER5A DNA MER1_type -10 179 3 2227 113 3 0 chr18 31780910 31781212 -54207722 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr18 31781212 31781233 -54207701 + AT_rich Low_complexity Low_complexity 1 21 0 569 228 75 6 chr18 31781628 31781786 -54207148 + MIR3 SINE MIR 34 205 -3 910 173 0 0 chr18 31781858 31781991 -54206943 - FLAM_A SINE Alu 0 133 1 231 36 0 0 chr18 31782058 31782086 -54206848 + (TA)n Simple_repeat Simple_repeat 2 29 0 459 0 0 0 chr18 31782181 31782232 -54206702 + (TG)n Simple_repeat Simple_repeat 2 52 0 2224 122 0 6 chr18 31782438 31782749 -54206185 + AluSx SINE Alu 1 309 -3 1197 193 23 34 chr18 31783121 31783386 -54205548 + MLT1C LTR MaLR 206 467 0 315 0 0 0 chr18 31783442 31783477 -54205457 + (CA)n Simple_repeat Simple_repeat 1 35 0 1946 116 14 10 chr18 31783885 31784177 -54204757 - L1PA14 LINE L1 -3 6158 5866 2335 89 0 43 chr18 31784917 31785243 -54203691 - AluSx SINE Alu 0 312 1 1638 193 4 0 chr18 31785698 31785978 -54202956 + AluJb SINE Alu 1 281 -31 360 392 0 26 chr18 31786017 31786211 -54202723 - MIR SINE MIR -34 228 40 553 303 113 28 chr18 31786379 31786663 -54202271 - MER102a DNA MER1_type -9 321 14 1101 181 30 10 chr18 31786710 31786909 -54202025 - MER3 DNA MER1_type -6 203 1 478 144 21 62 chr18 31787552 31787649 -54201285 + MER53 DNA DNA 1 93 -96 1908 143 3 10 chr18 31787861 31788155 -54200779 - AluJo SINE Alu -20 292 1 2277 119 6 0 chr18 31788165 31788476 -54200458 - AluSq SINE Alu 0 313 1 329 305 54 30 chr18 31788540 31788707 -54200227 - MIR SINE MIR -57 205 35 1989 103 14 14 chr18 31789448 31789757 -54199177 + AluSx SINE Alu 1 309 0 471 181 48 0 chr18 31789757 31789862 -54199072 + L1ME2 LINE L1 5696 5805 -357 564 207 106 80 chr18 31789937 31790125 -54198809 + L1ME2 LINE L1 5963 6155 -9 21 36 0 0 chr18 31790144 31790172 -54198762 + AT_rich Low_complexity Low_complexity 1 28 0 2423 64 7 3 chr18 31790300 31790598 -54198336 + AluSp SINE Alu 1 299 -14 1238 138 64 5 chr18 31790800 31791003 -54197931 + MER20 DNA MER1_type 3 217 -2 1083 106 0 183 chr18 31791522 31791757 -54197177 + 7SK RNA RNA 2 193 0 3783 175 7 63 chr18 31792142 31792874 -54196060 - LTR8 LTR ERV1 0 691 1 533 288 49 47 chr18 31793405 31793770 -54195164 - MER65A LTR ERV1 0 445 80 1446 56 0 11 chr18 31793798 31793978 -54194956 + L1PA6 LINE L1 5977 6154 0 2435 192 23 7 chr18 31794101 31794508 -54194426 + MLT2C2 LTR ERVL 16 432 -32 279 79 0 0 chr18 31794508 31794546 -54194388 + (TG)n Simple_repeat Simple_repeat 1 38 0 2435 192 23 7 chr18 31794546 31794580 -54194354 + MLT2C2 LTR ERVL 432 464 0 566 267 151 22 chr18 31794581 31794899 -54194035 + L1MC4a LINE L1 5577 5935 -1873 261 235 24 24 chr18 31795850 31795935 -54192999 - MIR SINE MIR -41 221 137 237 33 0 0 chr18 31796574 31796604 -54192330 + (CACCC)n Simple_repeat Simple_repeat 5 34 0 21 0 0 0 chr18 31799090 31799111 -54189823 + AT_rich Low_complexity Low_complexity 1 21 0 2629 37 3 0 chr18 31799150 31799450 -54189484 + AluY SINE Alu 1 301 -10 261 277 0 0 chr18 31800045 31800110 -54188824 + AluJ/monomer SINE Alu 238 302 0 2162 106 0 7 chr18 31801134 31801442 -54187492 + AluSx SINE Alu 1 306 0 3331 70 32 5 chr18 31801688 31802119 -54186815 - L1PA13 LINE L1 -2 6161 5719 689 308 145 9 chr18 31802280 31802708 -54186226 + L2 LINE L2 2828 3313 0 534 336 69 0 chr18 31802799 31803016 -54185918 + MIR SINE MIR 3 234 -28 240 35 0 0 chr18 31803062 31803091 -54185843 + (TG)n Simple_repeat Simple_repeat 1 29 0 263 327 93 9 chr18 31803376 31803483 -54185451 + MER5A DNA MER1_type 72 187 -2 13045 153 21 18 chr18 31804659 31805079 -54183855 + L1MA9 LINE L1 2915 3333 -2979 1809 148 62 7 chr18 31805079 31805370 -54183564 + AluJb SINE Alu 1 307 -5 13045 153 21 18 chr18 31805370 31807837 -54181097 + L1MA9 LINE L1 3333 5817 -495 2296 74 34 0 chr18 31807837 31808134 -54180800 + AluYa5 SINE Alu 1 307 -4 13045 153 21 18 chr18 31808134 31808632 -54180302 + L1MA9 LINE L1 5817 6312 0 782 181 8 0 chr18 31808679 31808806 -54180128 - FLAM_C SINE Alu -4 129 2 331 360 110 18 chr18 31808852 31809235 -54179699 + L1 LINE L1 3747 4164 -1982 26 30 0 0 chr18 31809985 31810018 -54178916 + AT_rich Low_complexity Low_complexity 1 33 0 203 0 0 36 chr18 31810174 31810202 -54178732 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 2036 138 0 0 chr18 31810204 31810486 -54178448 - AluJo SINE Alu -30 282 1 2222 107 3 0 chr18 31810517 31810806 -54178128 - AluSx SINE Alu -22 290 1 3303 148 9 9 chr18 31811474 31812021 -54176913 + LTR10A LTR ERV1 1 547 -62 484 267 30 15 chr18 31812491 31812626 -54176308 - MER5B DNA MER1_type 0 178 42 2957 191 78 15 chr18 31812681 31813284 -54175650 - LTR9B LTR ERV1 0 644 4 1397 193 42 9 chr18 31813287 31813566 -54175368 - HUERS-P3 LTR ERV1 0 8919 8304 1756 120 53 60 chr18 31813566 31813866 -54175068 + AluSx SINE Alu 1 298 -14 387 170 9 80 chr18 31814158 31814270 -54174664 - LTR9B-int LTR ERV1 -2443 4125 2469 * 9048 188 50 43 chr18 31814266 31815449 -54173485 - LTR9B-int LTR ERV1 -5478 1940 767 2373 103 3 0 chr18 31815449 31815759 -54173175 + AluSp SINE Alu 1 311 -2 9048 188 50 43 chr18 31815759 31816056 -54172878 - LTR9B-int LTR ERV1 -6651 767 474 2374 97 0 0 chr18 31816056 31816367 -54172567 + AluSq SINE Alu 1 311 -2 9048 188 50 43 chr18 31816367 31816809 -54172125 - LTR9B-int LTR ERV1 -6944 474 3 2581 207 83 26 chr18 31816811 31817415 -54171519 - LTR9B LTR ERV1 0 644 7 3767 98 5 72 chr18 31817422 31818032 -54170902 + MER4B LTR ERV1 42 610 0 2634 226 84 48 chr18 31818169 31818514 -54170420 - MER21B LTR ERV1 -41 822 491 1666 200 3 16 chr18 31818514 31818829 -54170105 - AluJo SINE Alu -1 311 1 2634 226 84 48 chr18 31818829 31819252 -54169682 - MER21B LTR ERV1 -372 491 26 410 183 17 108 chr18 31819251 31819371 -54169563 - MER21B LTR ERV1 -754 109 1 * 7022 179 25 7 chr18 31820527 31821907 -54167027 - L1P LINE L1 -2028 4118 2713 448 128 13 13 chr18 31821900 31821978 -54166956 + L1P4 LINE L1 5348 5425 -740 * 492 114 0 0 chr18 31821969 31822039 -54166895 + L1P4 LINE L1 5718 5787 -378 1504 123 0 9 chr18 31822041 31822261 -54166673 + AluSq SINE Alu 3 220 -93 651 226 141 71 chr18 31822856 31823042 -54165892 + MER39 LTR ERV1 1 173 -534 4897 64 9 0 chr18 31823042 31823624 -54165310 + LTR10C LTR ERV1 5 591 0 651 226 141 71 chr18 31823624 31823724 -54165210 + MER39 LTR ERV1 173 476 -231 268 254 45 37 chr18 31823724 31823858 -54165076 + MER65B LTR ERV1 3 137 -394 239 227 30 0 chr18 31823996 31824062 -54164872 + MER65B LTR ERV1 314 381 -150 815 191 71 31 chr18 31824208 31824433 -54164501 + MER39 LTR ERV1 474 707 0 606 200 227 0 chr18 31824823 31824973 -54163961 - MER5A DNA MER1_type 0 189 6 962 196 57 148 chr18 31825313 31825630 -54163304 + LTR8 LTR ERV1 1 256 -435 1410 192 61 76 chr18 31825665 31826123 -54162811 + LTR8A LTR ERV1 277 727 0 881 142 0 83 chr18 31826272 31826441 -54162493 + MLT1E3 LTR MaLR 470 624 0 535 275 111 14 chr18 31826441 31826801 -54162133 - L1ME LINE L1 -5120 1085 691 698 336 39 3 chr18 31827274 31827586 -54161348 - L1ME LINE L1 -6047 349 27 3372 168 29 4 chr18 31827600 31828161 -54160773 - L1MB1 LINE L1 -7 6161 5587 1040 201 32 8 chr18 31828174 31828423 -54160511 + L1MA8 LINE L1 5096 5350 -796 1756 142 4 0 chr18 31829237 31829504 -54159430 + L1PA13 LINE L1 5896 6163 0 5109 133 31 8 chr18 31831290 31831903 -54157031 + L1MA8 LINE L1 5466 6104 -187 2436 149 65 26 chr18 31831903 31832319 -54156615 - Tigger2a DNA MER2_type -2 432 1 5109 133 31 8 chr18 31832319 31832509 -54156425 + L1MA8 LINE L1 6104 6288 -3 21 0 0 0 chr18 31832510 31832531 -54156403 + AT_rich Low_complexity Low_complexity 1 21 0 434 288 46 13 chr18 31832725 31832878 -54156056 - MER110 LTR ERV1 -42 449 292 334 246 36 0 chr18 31832912 31833050 -54155884 + (TA)n Simple_repeat Simple_repeat 2 144 0 1860 163 137 16 chr18 31833319 31833699 -54155235 - MSTC LTR MaLR -2 426 1 260 310 123 14 chr18 31834647 31834810 -54154124 - MIR SINE MIR -38 224 45 2320 92 3 0 chr18 31834830 31835125 -54153809 - AluSg SINE Alu -14 296 1 306 0 0 0 chr18 31835436 31835470 -54153464 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 2155 109 7 3 chr18 31836405 31836728 -54152206 - AluSx SINE Alu 0 312 1 26 30 0 0 chr18 31836977 31837010 -54151924 + AT_rich Low_complexity Low_complexity 1 33 0 300 120 0 0 chr18 31838933 31838983 -54149951 + (A)n Simple_repeat Simple_repeat 1 50 0 960 110 0 29 chr18 31840739 31840875 -54148059 + FLAM_C SINE Alu 1 132 -1 189 121 0 0 chr18 31841472 31841505 -54147429 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 196 353 125 36 chr18 31841648 31842005 -54146929 + L2 LINE L2 2653 3082 -190 829 246 97 78 chr18 31842579 31842949 -54145985 - MLT1K LTR MaLR -68 520 144 2218 107 7 0 chr18 31843195 31843494 -54145440 + AluSq SINE Alu 4 304 -9 1921 148 30 7 chr18 31844027 31844330 -54144604 - AluSx SINE Alu -2 310 1 2208 149 28 33 chr18 31844747 31845136 -54143798 - MLT1B LTR MaLR 0 390 4 591 308 50 13 chr18 31845147 31845570 -54143364 - MLT1K LTR MaLR -28 560 96 453 208 89 0 chr18 31845577 31845678 -54143256 + MIR SINE MIR 2 111 -151 2438 73 0 28 chr18 31845774 31846091 -54142843 - AluY SINE Alu -3 308 1 351 261 61 9 chr18 31846230 31846345 -54142589 - MLT1L LTR MaLR 0 615 495 385 245 118 0 chr18 31846530 31846632 -54142302 - MLT1L LTR MaLR -362 253 140 3984 122 5 2 chr18 31846979 31847551 -54141383 + MER39B LTR ERV1 1 574 -79 1125 207 70 57 chr18 31847574 31847874 -54141060 - MLT1F1 LTR MaLR -263 304 1 209 33 33 0 chr18 31848144 31848174 -54140760 + (TTCC)n Simple_repeat Simple_repeat 2 32 0 1978 186 70 20 chr18 31848631 31849440 -54139494 + L1MC2 LINE L1 4762 5607 -737 * 5672 108 22 19 chr18 31849439 31850112 -54138822 + L1PA16 LINE L1 5302 5980 -186 2492 89 0 0 chr18 31850112 31850415 -54138519 + AluSg SINE Alu 1 303 -7 5672 108 22 19 chr18 31850415 31850603 -54138331 + L1PA16 LINE L1 5980 6166 0 3350 130 28 65 chr18 31850598 31850860 -54138074 + L1MC2 LINE L1 5595 5865 -479 * 2274 96 3 10 chr18 31850860 31851162 -54137772 + AluSq SINE Alu 1 300 -13 3350 130 28 65 chr18 31851162 31851546 -54137388 + L1MC2 LINE L1 5865 6217 -127 181 306 32 32 chr18 31851612 31851654 -54137280 - L3b LINE CR1 -12 1571 1530 220 258 0 16 chr18 31851654 31851716 -54137218 - MER5A DNA MER1_type 0 189 129 2171 107 120 0 chr18 31851720 31852029 -54136905 + L1PB1 LINE L1 5801 6146 -5 307 291 58 0 chr18 31852059 31852145 -54136789 - MER5A DNA MER1_type -49 140 50 280 370 92 8 chr18 31852448 31852567 -54136367 + L2 LINE L2 3136 3264 -8 2212 120 0 9 chr18 31853097 31853413 -54135521 + AluSq SINE Alu 1 313 0 231 222 22 0 chr18 31853616 31853661 -54135273 - MER46C DNA MER2_type 0 338 293 198 103 0 0 chr18 31853967 31853996 -54134938 + (CA)n Simple_repeat Simple_repeat 2 30 0 213 200 0 0 chr18 31854694 31854734 -54134200 + CT-rich Low_complexity Low_complexity 1 40 0 2751 234 52 35 chr18 31854835 31855618 -54133316 + L1ME1 LINE L1 5365 6161 -5 1714 217 23 40 chr18 31855887 31856284 -54132650 + MLT1B LTR MaLR 1 390 0 2681 26 0 3 chr18 31856463 31856765 -54132169 + AluY SINE Alu 1 301 -10 2077 70 19 0 chr18 31857027 31857285 -54131649 - AluY SINE Alu -48 263 1 23 0 0 0 chr18 31857294 31857317 -54131617 + AT_rich Low_complexity Low_complexity 1 23 0 811 134 57 167 chr18 31858349 31858445 -54130489 - MER20 DNA MER1_type 0 219 114 2430 75 3 3 chr18 31858445 31858751 -54130183 - AluY SINE Alu -5 306 1 811 134 57 167 chr18 31858751 31858900 -54130034 - MER20 DNA MER1_type -105 114 1 1304 222 12 34 chr18 31858926 31859250 -54129684 + L1ME2 LINE L1 5827 6143 -21 306 294 82 48 chr18 31859264 31859495 -54129439 + L1MC4 LINE L1 7803 8041 -1 710 290 96 20 chr18 31859589 31859882 -54129052 + L2 LINE L2 2994 3308 -5 201 351 118 33 chr18 31859897 31860142 -54128792 - L2 LINE L2 -9 3263 2998 252 247 123 0 chr18 31860583 31860656 -54128278 + MIR SINE MIR 2 83 -179 4214 122 21 11 chr18 31860656 31861310 -54127624 + MER50 LTR ERV1 1 661 -73 292 59 0 0 chr18 31861310 31861344 -54127590 + MER50-int LTR ERV1 9 42 -7163 770 200 25 44 chr18 31861345 31861505 -54127429 + MIR SINE MIR 79 235 -27 2354 100 0 0 chr18 31861578 31861878 -54127056 + AluSq SINE Alu 1 300 -13 623 128 80 64 chr18 31862431 31862556 -54126378 + MLT1B LTR MaLR 1 127 -263 1070 203 37 25 chr18 31862758 31862999 -54125935 + MLT1B LTR MaLR 147 390 0 859 78 16 0 chr18 31865089 31865218 -54123716 + (GGA)n Simple_repeat Simple_repeat 2 132 0 1215 122 11 0 chr18 31865729 31865917 -54123017 - AluSq SINE Alu -4 309 120 2090 121 3 3 chr18 31865927 31866224 -54122710 - AluSg SINE Alu -8 302 6 1238 126 5 0 chr18 31866566 31866756 -54122178 - MER72 LTR ERV1 -4 718 528 2045 154 52 0 chr18 31866803 31867133 -54121801 - MER72 LTR ERV1 -191 531 185 677 209 0 0 chr18 31867133 31867248 -54121686 + FLAM_C SINE Alu 1 115 -18 39 50 0 0 chr18 31867250 31867310 -54121624 + AT_rich Low_complexity Low_complexity 1 60 0 1117 192 5 10 chr18 31867313 31867511 -54121423 - MER72 LTR ERV1 -523 199 3 268 264 46 23 chr18 31867730 31867817 -54121117 + MIR3 SINE MIR 10 98 -110 190 226 12 119 chr18 31867837 31867921 -54121013 - MIR SINE MIR 0 262 188 22 35 0 0 chr18 31867926 31867955 -54120979 + AT_rich Low_complexity Low_complexity 1 29 0 3090 167 106 23 chr18 31868555 31869208 -54119726 - MER39 LTR ERV1 0 707 1 24 53 0 0 chr18 31869314 31869352 -54119582 + AT_rich Low_complexity Low_complexity 1 38 0 2309 69 45 0 chr18 31869492 31869782 -54119152 - AluY SINE Alu -8 303 1 905 129 0 50 chr18 31870201 31870341 -54118593 + FLAM_C SINE Alu 1 133 0 1564 69 37 9 chr18 31870467 31870683 -54118251 + MLT2A1 LTR ERVL 1 222 -222 7032 58 1 14 chr18 31870690 31871081 -54117853 + HERVL LTR ERVL 2954 3348 -2306 2458 71 0 16 chr18 31871081 31871389 -54117545 + AluY SINE Alu 1 303 -8 7032 58 1 14 chr18 31871389 31871867 -54117067 + HERVL LTR ERVL 3348 3812 -1842 2189 82 40 40 chr18 31871867 31872265 -54116669 + MLT2A1 LTR ERVL 81 453 0 820 162 0 0 chr18 31872313 31872430 -54116504 + FLAM_C SINE Alu 2 118 -25 229 311 46 33 chr18 31874982 31875133 -54113801 + MER5A DNA MER1_type 13 165 -24 2792 72 125 5 chr18 31875212 31875612 -54113322 + LTR7 LTR ERV1 1 448 -2 20349 98 64 24 chr18 31875614 31878774 -54110160 + HERVH LTR ERV1 1 3288 -4425 8280 113 7 8 chr18 31878766 31880491 -54108443 + HERVH LTR ERV1 3492 5233 -1858 * 1289 120 23 9 chr18 31880492 31880709 -54108225 + HERVH LTR ERV1 5600 5819 -1894 2166 109 48 13 chr18 31880709 31881086 -54107848 + HERVH LTR ERV1 7324 7713 0 2518 85 125 8 chr18 31881086 31881487 -54107447 + LTR7 LTR ERV1 1 448 -2 2192 103 3 0 chr18 31881555 31881888 -54107046 + AluSx SINE Alu 1 334 0 6034 132 17 30 chr18 31881930 31882912 -54106022 + LTR5 LTR ERVK 1 969 0 231 114 0 0 chr18 31883382 31883417 -54105517 + (TG)n Simple_repeat Simple_repeat 1 35 0 7289 43 1 3 chr18 31883703 31885052 -54103882 + L1PA5 LINE L1 4808 6154 0 24 32 0 0 chr18 31885057 31885088 -54103846 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr18 31885438 31885466 -54103468 + AT_rich Low_complexity Low_complexity 1 28 0 743 248 38 25 chr18 31886090 31886328 -54102606 + LTR40a LTR ERVL 1 241 -278 192 77 0 0 chr18 31886772 31886798 -54102136 + (T)n Simple_repeat Simple_repeat 1 26 0 2430 91 0 0 chr18 31887034 31887341 -54101593 - AluY SINE Alu -4 307 1 2253 107 0 0 chr18 31887370 31887668 -54101266 + AluSg SINE Alu 1 298 -12 3154 48 14 14 chr18 31887678 31888091 -54100843 + L1PA7 LINE L1 5742 6154 0 247 342 92 26 chr18 31888239 31888391 -54100543 - L2 LINE L2 0 3272 3111 409 259 80 6 chr18 31888418 31888580 -54100354 - MLT1J LTR MaLR -44 467 294 183 280 147 13 chr18 31888992 31889067 -54099867 - L2 LINE L2 -4 3309 3225 1810 170 45 84 chr18 31889168 31889736 -54099198 - LTR24B LTR ERV1 0 532 1 531 329 29 5 chr18 31889826 31890036 -54098898 - MIR SINE MIR -11 251 37 2203 124 24 32 chr18 31890093 31890471 -54098463 - THE1C LTR MaLR 0 375 1 698 192 89 115 chr18 31890620 31890846 -54098088 + MER34C LTR ERV1 45 258 -327 2713 93 3 3 chr18 31890846 31891221 -54097713 + THE1C LTR MaLR 1 375 0 698 192 89 115 chr18 31891221 31891385 -54097549 + MER34C LTR ERV1 258 425 -160 606 248 46 13 chr18 31891706 31891859 -54097075 + MER58B DNA MER1_type 183 340 -1 21 36 0 0 chr18 31892170 31892198 -54096736 + AT_rich Low_complexity Low_complexity 1 28 0 2247 123 0 0 chr18 31892246 31892554 -54096380 + AluSq SINE Alu 1 308 -5 207 0 0 0 chr18 31892622 31892645 -54096289 + (T)n Simple_repeat Simple_repeat 1 23 0 2412 93 0 0 chr18 31892789 31893090 -54095844 + AluSg SINE Alu 1 301 -9 2171 117 10 0 chr18 31893753 31894051 -54094883 + AluSq SINE Alu 1 301 -12 213 250 16 16 chr18 31894218 31894282 -54094652 + (TATG)n Simple_repeat Simple_repeat 3 66 0 727 192 0 0 chr18 31894571 31894696 -54094238 + FLAM_C SINE Alu 1 125 -8 2463 56 0 13 chr18 31894701 31895003 -54093931 - AluY SINE Alu -13 298 1 604 240 210 9 chr18 31895085 31895414 -54093520 + L1MC4 LINE L1 7437 7831 -211 2352 79 10 13 chr18 31895423 31895727 -54093207 + AluSp SINE Alu 1 303 -10 2147 104 10 0 chr18 31895837 31896126 -54092808 - AluSx SINE Alu -20 292 1 419 159 372 0 chr18 31896421 31896534 -54092400 + AluSg1 SINE Alu 5 159 -150 1514 199 214 77 chr18 31896539 31897213 -54091721 + LTR19C LTR ERV1 7 772 -7 1005 138 0 0 chr18 31897218 31897356 -54091578 + AluJb SINE Alu 155 292 -20 669 186 9 9 chr18 31897805 31897918 -54091016 + FLAM_A SINE Alu 2 114 -19 4909 147 27 24 chr18 31898318 31899219 -54089715 - MER4D LTR ERV1 0 903 1 2014 159 0 0 chr18 31899320 31899621 -54089313 + AluSx SINE Alu 1 301 -11 3060 146 71 4 chr18 31899646 31900165 -54088769 + MER41C LTR ERV1 1 554 0 3937 98 19 53 chr18 31900461 31901063 -54087871 - LTR9B LTR ERV1 0 644 65 1159 65 0 7 chr18 31901063 31901217 -54087717 + L1PA6 LINE L1 6002 6154 0 3937 98 19 53 chr18 31901217 31901280 -54087654 - LTR9B LTR ERV1 -579 65 1 2118 196 101 19 chr18 31901280 31901563 -54087371 + LTR48B LTR ERV1 4 262 -382 2130 95 190 36 chr18 31901563 31901953 -54086981 - LTR7 LTR ERV1 0 450 1 2118 196 101 19 chr18 31901953 31902261 -54086673 + LTR48B LTR ERV1 262 644 0 412 214 18 36 chr18 31902267 31902379 -54086555 - MER94 DNA DNA -23 111 2 207 320 63 25 chr18 31902873 31903009 -54085925 + MER5B DNA MER1_type 49 178 0 2875 189 121 22 chr18 31903105 31903260 -54085674 + MER63C DNA MER1_type 1 139 -921 2503 37 0 3 chr18 31903260 31903556 -54085378 - AluY SINE Alu -16 295 1 2875 189 121 22 chr18 31903556 31904184 -54084750 + MER63C DNA MER1_type 139 862 -68 2169 106 14 0 chr18 31905965 31906257 -54082677 + AluSx SINE Alu 1 296 -16 536 248 0 32 chr18 31906603 31906760 -54082174 + MER46C DNA MER2_type 187 338 0 25 31 0 0 chr18 31907225 31907257 -54081677 + AT_rich Low_complexity Low_complexity 1 32 0 196 323 112 31 chr18 31908241 31908464 -54080470 + L2 LINE L2 2395 2635 -679 737 171 32 91 chr18 31908492 31908616 -54080318 - MER5A DNA MER1_type -3 186 75 2424 92 3 0 chr18 31908616 31908922 -54080012 + AluY SINE Alu 1 307 -4 737 171 32 91 chr18 31908922 31908984 -54079950 - MER5A DNA MER1_type -114 75 11 2093 102 10 10 chr18 31908984 31909305 -54079629 - AluSq SINE Alu 0 321 1 510 228 55 28 chr18 31909459 31909604 -54079330 + MIR SINE MIR 113 261 -1 333 306 84 34 chr18 31910262 31910585 -54078349 + L2 LINE L2 649 987 -2327 298 242 32 32 chr18 31910892 31910987 -54077947 + MLT1H LTR MaLR 439 533 -16 401 310 99 0 chr18 31911015 31911157 -54077777 - MER5B DNA MER1_type -20 158 3 519 219 6 131 chr18 31911529 31911654 -54077280 + MER5B DNA MER1_type 7 109 -69 2661 33 0 3 chr18 31911654 31911956 -54076978 - AluY SINE Alu -10 301 1 519 219 6 131 chr18 31911956 31911990 -54076944 + MER5B DNA MER1_type 109 146 -32 281 277 0 44 chr18 31912094 31912208 -54076726 + L1M1 LINE L1 5466 5574 -590 397 233 98 84 chr18 31912222 31912309 -54076625 + L1ME3A LINE L1 5652 5736 -434 1885 140 16 29 chr18 31912309 31912624 -54076310 + AluSx SINE Alu 1 311 -1 397 233 98 84 chr18 31912624 31912811 -54076123 + L1ME3A LINE L1 5736 5930 -240 21 57 0 0 chr18 31912845 31912880 -54076054 + AT_rich Low_complexity Low_complexity 1 35 0 1011 150 0 0 chr18 31912882 31913029 -54075905 - FRAM SINE Alu -30 146 1 356 363 63 39 chr18 31913405 31913865 -54075069 + L2 LINE L2 1752 2222 -1092 394 329 82 0 chr18 31914571 31914741 -54074193 + MIR SINE MIR 34 217 -45 1993 142 7 0 chr18 31914970 31915258 -54073676 + AluSx SINE Alu 1 290 -22 234 160 0 0 chr18 31915268 31915318 -54073616 + GA-rich Low_complexity Low_complexity 3 52 0 930 238 42 0 chr18 31915456 31915670 -54073264 + MER58A DNA MER1_type 1 223 -1 26 50 0 0 chr18 31916236 31916276 -54072658 + AT_rich Low_complexity Low_complexity 1 40 0 27 0 0 0 chr18 31916763 31916790 -54072144 + AT_rich Low_complexity Low_complexity 1 27 0 762 200 0 0 chr18 31916804 31916929 -54072005 - FLAM_A SINE Alu -8 125 1 970 161 88 19 chr18 31917567 31917772 -54071162 + MER46A DNA MER2_type 17 235 -1 229 383 11 0 chr18 31918549 31918643 -54070291 - L2 LINE L2 -1 3271 3177 189 258 65 16 chr18 31918797 31918859 -54070075 + MIR SINE MIR 128 192 -70 683 214 7 7 chr18 31918895 31919040 -54069894 - L1MC4a LINE L1 -956 6852 6708 781 196 122 68 chr18 31919071 31919407 -54069527 + L1ME3A LINE L1 5817 6170 0 628 110 0 0 chr18 31919548 31919639 -54069295 + AluSc SINE Alu 218 308 -1 622 184 258 4 chr18 31919642 31919875 -54069059 + L1MC4 LINE L1 7251 7542 -500 325 26 14 12 chr18 31919875 31920103 -54068831 + AluY SINE Alu 1 310 0 1378 215 32 67 chr18 31920103 31920629 -54068305 + L1MC4 LINE L1 7535 8042 0 2068 129 0 16 chr18 31921186 31921503 -54067431 + AluJb SINE Alu 1 312 0 597 171 143 0 chr18 31922382 31922522 -54066412 - MER5C DNA MER1_type -164 160 1 239 284 51 60 chr18 31923816 31924186 -54064748 + L1MC5 LINE L1 7541 7907 -54 1679 150 38 31 chr18 31924853 31925146 -54063788 - AluJb SINE Alu -17 295 1 21 57 0 0 chr18 31925538 31925573 -54063361 + AT_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr18 31925784 31925821 -54063113 + AT_rich Low_complexity Low_complexity 1 37 0 256 321 85 36 chr18 31926093 31926258 -54062676 + MER5A DNA MER1_type 1 173 -16 * 357 323 10 0 chr18 31926235 31926331 -54062603 + MER5A DNA MER1_type 10 106 -83 801 150 0 50 chr18 31926411 31926551 -54062383 - FLAM_C SINE Alu 0 133 1 183 80 0 0 chr18 31926662 31926687 -54062247 + (ATATG)n Simple_repeat Simple_repeat 1 25 0 1805 150 14 24 chr18 31926952 31927245 -54061689 + AluJb SINE Alu 1 290 -22 222 250 0 0 chr18 31927749 31927797 -54061137 + (TA)n Simple_repeat Simple_repeat 2 49 0 2134 116 0 0 chr18 31928158 31928462 -54060472 - AluSx SINE Alu 0 304 1 2205 67 18 7 chr18 31929581 31929865 -54059069 + AluSq SINE Alu 1 287 -26 1917 113 74 0 chr18 31930002 31930285 -54058649 - AluSq SINE Alu -9 304 1 1349 147 14 61 chr18 31930285 31930480 -54058454 - MER4E LTR ERV1 -500 279 101 2312 75 7 10 chr18 31930480 31930774 -54058160 - AluSg SINE Alu -17 293 1 1349 147 14 61 chr18 31930774 31930871 -54058063 - MER4E LTR ERV1 -678 101 1 773 165 8 15 chr18 31931023 31931156 -54057778 + FLAM_C SINE Alu 1 132 -1 1668 173 22 22 chr18 31931200 31931569 -54057365 + L1MB7 LINE L1 5806 6174 -10 1008 153 156 42 chr18 31931822 31932129 -54056805 + MER4A LTR ERV1 1 342 -322 430 149 208 51 chr18 31932136 31932372 -54056562 + MER4C LTR ERV1 159 436 -29 319 305 68 0 chr18 31932495 31932613 -54056321 + Charlie2 DNA MER1_type 273 398 -2384 * 334 203 38 0 chr18 31932612 31932691 -54056243 + Charlie2 DNA MER1_type 2012 2093 -769 297 0 0 0 chr18 31933368 31933401 -54055533 + (CCCCCG)n Simple_repeat Simple_repeat 4 36 0 35 24 0 0 chr18 31933819 31933861 -54055073 + GC_rich Low_complexity Low_complexity 1 42 0 2277 84 0 0 chr18 31935221 31935539 -54053395 - AluSp SINE Alu 0 318 1 245 333 142 0 chr18 31935682 31935802 -54053132 - MIR SINE MIR -111 151 15 241 182 0 18 chr18 31935848 31935903 -54053031 - MER33 DNA MER1_type 0 324 271 1785 57 0 0 chr18 31935903 31936115 -54052819 + AluSg SINE Alu 1 212 -98 1348 141 29 32 chr18 31936163 31936212 -54052722 - MER33 DNA MER1_type -2307 278 230 2241 68 34 3 chr18 31936212 31936505 -54052429 - AluSg SINE Alu -8 302 1 1348 141 29 32 chr18 31936505 31936732 -54052202 - MER33 DNA MER1_type -2355 230 3 1309 161 0 67 chr18 31936801 31937056 -54051878 - AluJb SINE Alu -3 309 72 2350 79 0 13 chr18 31937595 31937899 -54051035 - AluSc SINE Alu -8 301 2 218 106 43 21 chr18 31938305 31938352 -54050582 + (TTAAA)n Simple_repeat Simple_repeat 5 52 0 2037 141 7 0 chr18 31938698 31938997 -54049937 + AluSx SINE Alu 1 301 -11 578 90 0 0 chr18 31939088 31939166 -54049768 - U6 snRNA snRNA -28 79 2 1435 201 32 3 chr18 31939167 31939451 -54049483 - AluJb SINE Alu -20 292 1 2195 105 3 13 chr18 31939457 31939771 -54049163 - AluY SINE Alu 0 311 1 2002 107 3 48 chr18 31939773 31939945 -54048989 - AluSx SINE Alu -16 296 143 2401 89 0 3 chr18 31939945 31940248 -54048686 - AluSq SINE Alu -11 302 1 2002 107 3 48 chr18 31940248 31940385 -54048549 - AluSx SINE Alu -169 143 1 404 119 0 45 chr18 31940389 31940456 -54048478 - FLAM SINE Alu -16 127 64 1859 139 4 0 chr18 31941214 31941514 -54047420 - AluJb SINE Alu 0 301 1 1969 136 7 10 chr18 31941630 31941939 -54046995 - AluJb SINE Alu -4 308 1 324 312 64 8 chr18 31942017 31942142 -54046792 - L1MC4a LINE L1 -1622 6186 6055 2188 98 3 20 chr18 31942612 31942918 -54046016 - AluSx SINE Alu -11 301 1 401 262 109 25 chr18 31942955 31943230 -54045704 - L1MC4a LINE L1 -1749 6059 5762 297 176 0 0 chr18 31943244 31943295 -54045639 - AluJb SINE Alu -132 170 120 341 154 0 0 chr18 31943419 31943471 -54045463 - Alu SINE Alu -251 52 1 183 80 0 0 chr18 31943582 31943607 -54045327 + (ATATG)n Simple_repeat Simple_repeat 1 25 0 1805 150 14 24 chr18 31943872 31944165 -54044769 + AluJb SINE Alu 1 290 -22 222 250 0 0 chr18 31944669 31944717 -54044217 + (TA)n Simple_repeat Simple_repeat 2 49 0 2134 116 0 0 chr18 31945078 31945382 -54043552 - AluSx SINE Alu 0 304 1 2488 56 10 3 chr18 31946501 31946805 -54042129 + AluY SINE Alu 1 306 -5 1144 88 0 14 chr18 31946817 31946964 -54041970 + AluSg/x SINE Alu 84 228 -82 1321 143 14 14 chr18 31947914 31948124 -54040810 - AluSx SINE Alu -7 305 96 676 118 0 73 chr18 31948230 31948340 -54040594 - AluSx SINE Alu -210 102 1 884 165 0 0 chr18 31948622 31948755 -54040179 - AluJb SINE Alu -8 304 172 763 192 186 24 chr18 31950253 31950544 -54038390 + MER46C DNA MER2_type 1 338 0 1450 152 42 55 chr18 31950621 31950939 -54037995 + AluJb SINE Alu 1 314 0 2379 76 21 0 chr18 31951556 31951846 -54037088 + AluSg SINE Alu 1 296 -14 387 246 53 0 chr18 31951956 31952070 -54036864 + L1MC/D LINE L1 5626 5745 -2063 1453 181 60 11 chr18 31953470 31953751 -54035183 + AluJb SINE Alu 2 296 -16 1990 86 15 7 chr18 31954615 31954884 -54034050 + AluY SINE Alu 29 299 -12 410 303 125 25 chr18 31954947 31955340 -54033594 + L1MC/D LINE L1 5389 5820 -1988 339 189 47 34 chr18 31955767 31955915 -54033019 + (TATAA)n Simple_repeat Simple_repeat 3 152 0 253 248 40 30 chr18 31957204 31957305 -54031629 + MER103 DNA DNA 57 158 -8 52 0 0 0 chr18 31957605 31957657 -54031277 + AT_rich Low_complexity Low_complexity 1 52 0 200 268 36 0 chr18 31959444 31959500 -54029434 + L2 LINE L2 3244 3301 -12 1071 96 0 0 chr18 31959562 31959698 -54029236 + AluSg/x SINE Alu 151 286 -26 212 0 36 0 chr18 31960479 31960507 -54028427 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1299 175 5 5 chr18 31960528 31960734 -54028200 - AluJo SINE Alu -22 290 85 337 278 121 27 chr18 31961335 31961621 -54027313 + L1ME4a LINE L1 5641 5984 -137 2343 79 0 16 chr18 31961621 31961926 -54027008 + AluSg SINE Alu 1 300 -10 337 278 121 27 chr18 31961926 31962078 -54026856 + L1ME4a LINE L1 5984 6120 -1 23 0 0 0 chr18 31963014 31963037 -54025897 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr18 31963281 31963304 -54025630 + AT_rich Low_complexity Low_complexity 1 23 0 252 273 58 0 chr18 31963544 31963665 -54025269 - L1MC/D LINE L1 -1987 5821 5694 1162 148 136 23 chr18 31963798 31964055 -54024879 - L1PB4 LINE L1 -6 6150 5865 380 254 231 41 chr18 31964220 31964257 -54024677 + L1ME4a LINE L1 5675 5704 -417 2121 69 58 4 chr18 31964257 31964533 -54024401 - AluSc SINE Alu -18 291 1 380 254 231 41 chr18 31964533 31964790 -54024144 + L1ME4a LINE L1 5704 6025 -96 2413 93 0 3 chr18 31964822 31965132 -54023802 - AluY SINE Alu -2 309 1 48 53 0 0 chr18 31967121 31967197 -54021737 + AT_rich Low_complexity Low_complexity 1 76 0 243 0 0 0 chr18 31967226 31967253 -54021681 + (CCTG)n Simple_repeat Simple_repeat 3 29 0 1138 206 68 10 chr18 31967626 31967986 -54020948 + L1MA4 LINE L1 5891 6287 -10 2321 95 0 3 chr18 31968023 31968327 -54020607 + AluY SINE Alu 1 303 -8 2119 113 0 3 chr18 31968774 31969081 -54019853 - AluSx SINE Alu 0 307 2 2142 105 0 7 chr18 31970088 31970394 -54018540 + AluSx SINE Alu 1 304 0 698 231 106 15 chr18 31970662 31970799 -54018135 + MER20 DNA MER1_type 2 164 -55 207 0 0 0 chr18 31970799 31970822 -54018112 + (CAAGA)n Simple_repeat Simple_repeat 5 27 0 698 231 106 15 chr18 31970822 31970883 -54018051 + MER20 DNA MER1_type 164 218 -1 2162 109 0 0 chr18 31971497 31971839 -54017095 + AluSx SINE Alu 1 342 0 1782 151 0 17 chr18 31971846 31972137 -54016797 + AluJb SINE Alu 26 311 -1 1063 130 6 47 chr18 31972773 31972904 -54016030 + AluJb SINE Alu 9 133 -179 2218 103 0 19 chr18 31972904 31973215 -54015719 + AluSx SINE Alu 1 305 -7 1063 130 6 47 chr18 31973215 31973252 -54015682 + AluJb SINE Alu 133 170 -142 401 262 109 25 chr18 31973266 31973541 -54015393 + L1MC4a LINE L1 5762 6059 -1749 2188 98 3 20 chr18 31973578 31973884 -54015050 + AluSx SINE Alu 1 301 -11 324 312 64 8 chr18 31974354 31974479 -54014455 + L1MC4a LINE L1 6055 6186 -1622 1969 136 7 10 chr18 31974557 31974866 -54014068 + AluJb SINE Alu 1 308 -4 1860 139 4 0 chr18 31974982 31975282 -54013652 + AluJb SINE Alu 1 301 0 404 119 0 45 chr18 31976040 31976107 -54012827 + FLAM SINE Alu 64 127 -16 2011 106 3 48 chr18 31976111 31976248 -54012686 + AluSx SINE Alu 1 143 -169 2401 89 0 3 chr18 31976248 31976551 -54012383 + AluSq SINE Alu 1 302 -11 2011 106 3 48 chr18 31976551 31976724 -54012210 + AluSx SINE Alu 143 297 -15 1799 130 91 11 chr18 31976725 31977010 -54011924 + AluSq SINE Alu 1 308 -5 1643 250 152 42 chr18 31977221 31978330 -54010604 + HAL1 LINE L1 636 1867 -640 657 231 61 52 chr18 31978349 31978578 -54010356 - MER106A DNA MER1_type -5 231 1 1401 132 167 8 chr18 31978708 31978965 -54009969 - AluJb SINE Alu -6 306 9 302 250 148 8 chr18 31978980 31979108 -54009826 + HAL1 LINE L1 2036 2181 -326 349 276 28 69 chr18 31979134 31979279 -54009655 + HAL1 LINE L1 2246 2384 -123 1651 174 7 52 chr18 31979358 31979521 -54009413 - AluJb SINE Alu -16 296 152 2075 96 46 0 chr18 31979521 31979803 -54009131 - AluSq SINE Alu -18 295 1 1651 174 7 52 chr18 31979803 31979949 -54008985 - AluJb SINE Alu -160 152 1 406 165 139 0 chr18 31980038 31980117 -54008817 + FLAM_C SINE Alu 16 105 -38 1842 149 0 4 chr18 31980123 31980398 -54008536 + AluSx SINE Alu 5 278 -34 373 18 18 18 chr18 31980400 31980455 -54008479 + (TAAAA)n Simple_repeat Simple_repeat 1 55 0 1482 189 39 29 chr18 31980463 31980583 -54008351 + AluJo SINE Alu 1 118 -194 279 0 0 0 chr18 31980583 31980614 -54008320 + (CA)n Simple_repeat Simple_repeat 2 32 0 1482 189 39 29 chr18 31980614 31980799 -54008135 + AluJo SINE Alu 118 309 -3 261 317 242 0 chr18 31980946 31981066 -54007868 + L2 LINE L2 3117 3265 -7 207 270 36 81 chr18 31981094 31981145 -54007789 - MIR3 SINE MIR -5 203 151 2278 102 0 13 chr18 31981145 31981459 -54007475 + AluSx SINE Alu 1 310 -2 207 270 36 81 chr18 31981459 31981518 -54007416 - MIR3 SINE MIR -57 151 98 1494 177 105 19 chr18 31981518 31981784 -54007150 + AluJo SINE Alu 1 289 -23 782 160 0 21 chr18 31981799 31981943 -54006991 + AluJb SINE Alu 171 311 -1 2354 94 0 0 chr18 31982369 31982666 -54006268 - AluSx SINE Alu -15 297 1 695 169 16 16 chr18 31982898 31983022 -54005912 + FLAM_C SINE Alu 1 124 -19 452 149 0 27 chr18 31983043 31983117 -54005817 + FLAM SINE Alu 53 124 -19 21 0 0 0 chr18 31983117 31983138 -54005796 + AT_rich Low_complexity Low_complexity 1 21 0 256 244 195 0 chr18 31983349 31983431 -54005503 - L2 LINE L2 -1 3312 3215 657 209 30 0 chr18 31984251 31984385 -54004549 + L1MC1 LINE L1 6196 6333 0 2086 125 13 16 chr18 31984394 31984707 -54004227 + AluSx SINE Alu 1 312 0 2305 78 0 50 chr18 31984946 31985266 -54003668 + AluSx SINE Alu 1 304 -8 2499 66 0 0 chr18 31985266 31985567 -54003367 + AluY SINE Alu 1 301 -10 506 316 63 59 chr18 31985569 31985806 -54003128 + MIR SINE MIR 3 240 -22 2062 103 17 7 chr18 31986151 31986442 -54002492 + AluSx SINE Alu 1 294 -18 183 42 0 0 chr18 31986744 31986768 -54002166 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2097 86 4 0 chr18 31986832 31987101 -54001833 + AluSq SINE Alu 1 270 -43 266 128 0 0 chr18 31987102 31987141 -54001793 + AluSp/q SINE Alu 232 270 -33 * 334 119 0 51 chr18 31987137 31987237 -54001697 + AluS SINE Alu 225 321 0 2167 92 14 0 chr18 31987309 31987623 -54001311 + AluSp SINE Alu 1 318 0 991 91 23 0 chr18 31987680 31987812 -54001122 + AluSp/q SINE Alu 166 300 -13 832 150 50 120 chr18 31987879 31987984 -54000950 + AluJo SINE Alu 12 98 -214 2289 94 0 10 chr18 31987984 31988283 -54000651 - AluSg SINE Alu -13 297 2 832 150 50 120 chr18 31988283 31988377 -54000557 + AluJo SINE Alu 98 197 -115 1571 177 19 41 chr18 31988424 31988741 -54000193 + AluJo SINE Alu 1 310 -2 2200 117 3 3 chr18 31988867 31989174 -53999760 + AluSx SINE Alu 1 307 -5 2400 80 3 6 chr18 31989177 31989489 -53999445 + AluY SINE Alu 1 311 0 1249 205 9 0 chr18 31989495 31989724 -53999210 + AluJb SINE Alu 1 231 -81 48 53 0 0 chr18 31991523 31991599 -53997335 + AT_rich Low_complexity Low_complexity 1 76 0 243 0 0 0 chr18 31991628 31991655 -53997279 + (CCTG)n Simple_repeat Simple_repeat 3 29 0 1138 206 68 10 chr18 31992028 31992388 -53996546 + L1MA4 LINE L1 5891 6287 -10 2382 92 0 0 chr18 31992425 31992729 -53996205 + AluY SINE Alu 1 304 -7 405 338 121 52 chr18 31992729 31993191 -53995743 + L1M2 LINE L1 15 508 -6341 2375 60 7 3 chr18 31993547 31993847 -53995087 + AluY SINE Alu 1 301 -10 2464 73 3 3 chr18 31993857 31994159 -53994775 + AluSp SINE Alu 1 302 -11 10798 206 41 20 chr18 31994453 31996307 -53992627 + L1PA16 LINE L1 1736 3548 -2618 288 0 0 0 chr18 31996307 31996339 -53992595 + (TA)n Simple_repeat Simple_repeat 2 33 0 10798 206 41 20 chr18 31996339 31998824 -53990110 + L1PA16 LINE L1 3548 6141 -25 2275 117 0 0 chr18 31998831 31999131 -53989803 - AluSg SINE Alu -10 300 1 339 115 19 0 chr18 31999160 31999212 -53989722 + Alu SINE Alu 2 54 -254 531 258 0 0 chr18 31999313 31999433 -53989501 - AluSp SINE Alu -180 133 14 189 0 0 0 chr18 31999482 31999503 -53989431 + (A)n Simple_repeat Simple_repeat 1 21 0 2022 107 0 0 chr18 31999838 32000100 -53988834 + AluSg SINE Alu 2 263 -47 3537 105 0 80 chr18 32000265 32000500 -53988434 + L1PA10 LINE L1 3771 4023 -2123 2391 80 3 3 chr18 32000500 32000801 -53988133 + AluSq SINE Alu 1 301 -12 3537 105 0 80 chr18 32000801 32001212 -53987722 + L1PA10 LINE L1 4023 4365 -1781 1147 78 0 28 chr18 32001208 32001387 -53987547 + L1PA10 LINE L1 5311 5484 -647 * 1456 118 5 0 chr18 32001388 32001583 -53987351 + AluSp SINE Alu 1 196 -117 3348 76 19 9 chr18 32001594 32002055 -53986879 + L1PA10 LINE L1 5687 6152 -16 23 0 0 0 chr18 32002056 32002079 -53986855 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr18 32003617 32003647 -53985287 + AT_rich Low_complexity Low_complexity 1 30 0 190 204 102 20 chr18 32004975 32005024 -53983910 - MIR3 SINE MIR -1 207 155 24 91 0 0 chr18 32005210 32005276 -53983658 + AT_rich Low_complexity Low_complexity 1 66 0 314 284 156 39 chr18 32005479 32005879 -53983055 - L1MC4a LINE L1 -1917 5891 5418 1523 183 35 7 chr18 32005879 32006169 -53982765 + AluJo SINE Alu 10 307 -5 314 284 156 39 chr18 32006169 32006275 -53982659 - L1MC4a LINE L1 -2390 5418 5326 309 135 0 0 chr18 32006508 32006560 -53982374 + (TG)n Simple_repeat Simple_repeat 2 53 0 23 0 0 0 chr18 32006970 32006993 -53981941 + AT_rich Low_complexity Low_complexity 1 23 0 296 248 80 44 chr18 32009070 32009183 -53979751 - L2 LINE L2 -1 3271 3155 25 65 0 0 chr18 32009471 32009517 -53979417 + AT_rich Low_complexity Low_complexity 1 46 0 336 312 155 67 chr18 32009575 32009752 -53979182 - L2 LINE L2 -812 2502 2342 2184 110 7 10 chr18 32009752 32010053 -53978881 - AluSx SINE Alu -12 300 1 336 312 155 67 chr18 32010053 32010250 -53978684 - L2 LINE L2 -972 2342 2095 29 60 0 0 chr18 32010709 32010759 -53978175 + AT_rich Low_complexity Low_complexity 1 50 0 1118 203 82 23 chr18 32011128 32011434 -53977500 + MER2 DNA MER2_type 22 345 0 487 243 71 29 chr18 32012396 32012536 -53976398 + MIR SINE MIR 116 261 -1 251 328 25 49 chr18 32012627 32012749 -53976185 + L2 LINE L2 2642 2760 -554 1896 143 11 3 chr18 32012794 32013081 -53975853 + AluSg SINE Alu 1 289 -21 2075 130 13 0 chr18 32013085 32013386 -53975548 + AluSx SINE Alu 1 305 -7 1868 138 0 51 chr18 32015161 32015473 -53973461 + AluSx SINE Alu 1 296 -16 2380 50 13 3 chr18 32015897 32016195 -53972739 + AluY SINE Alu 1 301 -10 243 146 0 0 chr18 32016231 32016272 -53972662 + (CGTG)n Simple_repeat Simple_repeat 2 42 0 832 146 8 0 chr18 32016872 32017002 -53971932 + FLAM_C SINE Alu 1 131 -2 1863 156 7 7 chr18 32017088 32017390 -53971544 + AluJb SINE Alu 7 308 -4 1391 118 5 0 chr18 32017408 32017594 -53971340 + AluSp SINE Alu 13 199 -114 183 288 27 68 chr18 32017720 32017793 -53971141 + L2 LINE L2 3201 3270 -43 2166 128 0 0 chr18 32017876 32018173 -53970761 + AluSx SINE Alu 1 297 -15 24 0 0 0 chr18 32018657 32018681 -53970253 + AT_rich Low_complexity Low_complexity 1 24 0 936 158 22 65 chr18 32019234 32019418 -53969516 + AluSx SINE Alu 60 235 -77 343 284 169 14 chr18 32019881 32020029 -53968905 - MIR SINE MIR -4 258 88 23 33 0 0 chr18 32020122 32020152 -53968782 + AT_rich Low_complexity Low_complexity 1 30 0 768 194 0 22 chr18 32020275 32020409 -53968525 - FLAM_A SINE Alu -2 131 1 21 0 0 0 chr18 32020753 32020774 -53968160 + AT_rich Low_complexity Low_complexity 1 21 0 274 321 94 0 chr18 32021127 32021233 -53967701 - MIR3 SINE MIR 0 208 93 23 68 0 0 chr18 32021813 32021857 -53967077 + AT_rich Low_complexity Low_complexity 1 44 0 21 36 0 0 chr18 32022381 32022409 -53966525 + AT_rich Low_complexity Low_complexity 1 28 0 493 310 170 21 chr18 32023470 32023899 -53965035 + L3 LINE CR1 1083 1575 -2 891 95 0 3 chr18 32024362 32024593 -53964341 + AluSx SINE Alu 1 294 -15 2052 89 45 58 chr18 32024598 32024911 -53964023 + AluSx SINE Alu 1 309 -3 341 115 19 0 chr18 32024920 32024972 -53963962 + Alu SINE Alu 1 53 -249 * 363 20 0 0 chr18 32024970 32025019 -53963915 + AluY SINE Alu 254 302 0 1220 120 0 55 chr18 32025319 32025336 -53963598 + AluSg/x SINE Alu 118 134 -176 2085 128 0 10 chr18 32025336 32025632 -53963302 + AluSx SINE Alu 1 293 -19 1220 120 0 55 chr18 32025632 32025814 -53963120 + AluSg/x SINE Alu 134 306 -4 2238 128 0 0 chr18 32025975 32026272 -53962662 + AluSx SINE Alu 3 299 -13 1101 190 156 15 chr18 32027024 32027287 -53961647 + AluSc SINE Alu 7 306 -3 1906 120 35 7 chr18 32028314 32028597 -53960337 + AluSx SINE Alu 1 291 -21 2274 95 3 13 chr18 32028610 32028742 -53960192 + AluSx SINE Alu 4 136 -176 2336 55 41 10 chr18 32028742 32029035 -53959899 + AluY SINE Alu 1 302 -9 2274 95 3 13 chr18 32029035 32029206 -53959728 + AluSx SINE Alu 136 304 -8 2119 113 0 3 chr18 32029653 32029960 -53958974 - AluSx SINE Alu 0 307 2 2141 105 0 7 chr18 32030969 32031255 -53957679 + AluSx SINE Alu 1 284 -28 181 0 0 0 chr18 32031255 32031275 -53957659 + (TAA)n Simple_repeat Simple_repeat 2 180 0 227 254 34 0 chr18 32031547 32031606 -53957328 + MER20 DNA MER1_type 6 66 -153 4029 146 7 80 chr18 32031775 32031872 -53957062 + MER4E LTR ERV1 1 103 -676 2221 75 7 10 chr18 32031872 32032166 -53956768 + AluSg SINE Alu 1 293 -17 4029 146 7 80 chr18 32032166 32032361 -53956573 + MER4E LTR ERV1 103 311 -468 1901 102 72 7 chr18 32032361 32032654 -53956280 + AluSq SINE Alu 1 312 -1 4029 146 7 80 chr18 32032654 32033153 -53955781 + MER4E LTR ERV1 311 731 -48 2078 110 7 7 chr18 32033153 32033452 -53955482 + AluSg SINE Alu 1 299 -11 4029 146 7 80 chr18 32033452 32033498 -53955436 + MER4E LTR ERV1 731 779 0 1759 119 65 7 chr18 32033567 32033845 -53955089 + AluSx SINE Alu 1 294 -18 1244 68 124 0 chr18 32034105 32034282 -53954652 - MER4E LTR ERV1 0 766 568 1724 191 42 23 chr18 32034282 32034732 -53954202 + LTR2B LTR ERV1 1 490 0 424 141 131 40 chr18 32034732 32034831 -53954103 - MER4E LTR ERV1 -193 586 479 422 116 0 0 chr18 32034841 32034910 -53954024 + AluS SINE Alu 230 298 -11 2470 153 69 27 chr18 32034910 32034939 -53953995 - MER4E LTR ERV1 -310 469 443 2214 99 0 13 chr18 32034939 32035253 -53953681 + AluSg SINE Alu 1 310 0 2470 153 69 27 chr18 32035253 32035399 -53953535 - MER4E LTR ERV1 -336 443 305 2019 104 3 13 chr18 32035399 32035563 -53953371 - AluSc SINE Alu -14 295 134 2118 115 0 6 chr18 32035563 32035875 -53953059 - AluSx SINE Alu -2 310 1 2019 104 3 13 chr18 32035875 32036008 -53952926 - AluSc SINE Alu -175 134 1 2470 153 69 27 chr18 32036008 32036281 -53952653 - MER4E LTR ERV1 -474 305 1 * 2807 140 78 71 chr18 32036281 32036702 -53952232 + LTR29 LTR ERV1 13 430 -192 817 216 0 19 chr18 32036702 32036864 -53952070 + FRAM SINE Alu 5 163 -3 2807 140 78 71 chr18 32036864 32036953 -53951981 + LTR29 LTR ERV1 430 531 -91 1581 186 0 0 chr18 32036953 32037253 -53951681 + AluJb SINE Alu 9 308 0 2807 140 78 71 chr18 32037253 32037327 -53951607 + LTR29 LTR ERV1 531 603 -19 325 274 52 44 chr18 32037346 32037398 -53951536 - MLT1K LTR MaLR -327 261 211 4512 122 46 42 chr18 32037398 32037674 -53951260 + MER4E LTR ERV1 1 274 -505 1508 83 0 0 chr18 32037674 32037867 -53951067 + AluSc SINE Alu 86 278 -31 4512 122 46 42 chr18 32037867 32038366 -53950568 + MER4E LTR ERV1 274 779 0 325 274 52 44 chr18 32038366 32038448 -53950486 - MLT1K LTR MaLR -377 211 126 1050 122 0 113 chr18 32038671 32038884 -53950050 + AluSg SINE Alu 1 189 -121 425 110 68 0 chr18 32038884 32038957 -53949977 + AluSg SINE Alu 57 134 -176 2279 84 7 0 chr18 32038957 32039255 -53949679 + AluSg SINE Alu 1 300 -10 22 0 0 0 chr18 32039385 32039407 -53949527 + AT_rich Low_complexity Low_complexity 1 22 0 2162 106 0 10 chr18 32039898 32040209 -53948725 + AluSx SINE Alu 1 308 -4 232 254 16 0 chr18 32040260 32040323 -53948611 - MLT1J LTR MaLR -343 168 105 1341 172 76 102 chr18 32040689 32041149 -53947785 + LTR7 LTR ERV1 1 448 -2 2026 107 3 17 chr18 32041225 32041525 -53947409 - AluSq SINE Alu -17 296 1 2302 98 3 0 chr18 32041677 32041983 -53946951 - AluSp SINE Alu -6 307 1 928 83 8 0 chr18 32041987 32042119 -53946815 - AluSp SINE Alu -180 133 1 922 103 127 6 chr18 32042121 32042152 -53946782 + L1MA1 LINE L1 6118 6144 -158 1961 127 0 7 chr18 32042152 32042451 -53946483 + AluSx SINE Alu 3 299 -13 922 103 127 6 chr18 32042451 32042584 -53946350 + L1MA1 LINE L1 6144 6302 0 833 120 81 154 chr18 32042599 32042722 -53946212 - LTR26E LTR ERV1 -206 416 286 1827 128 0 10 chr18 32042722 32043011 -53945923 - AluSx SINE Alu -18 294 9 833 120 81 154 chr18 32043011 32043027 -53945907 - LTR26E LTR ERV1 -336 286 270 1454 112 127 19 chr18 32043027 32043287 -53945647 - AluSg SINE Alu -21 289 2 1820 142 14 10 chr18 32043294 32043590 -53945344 - AluSq SINE Alu -16 297 1 833 120 81 154 chr18 32043590 32043675 -53945259 - LTR26E LTR ERV1 -358 264 200 1355 152 9 0 chr18 32043719 32043930 -53945004 - LTR26E LTR ERV1 -409 213 1 309 196 0 0 chr18 32043930 32043981 -53944953 + L1MC4 LINE L1 6653 6703 -1339 * 544 218 69 167 chr18 32043979 32044160 -53944774 - L1 LINE L1 -2361 3785 3588 1527 160 3 55 chr18 32044160 32044472 -53944462 + AluJo SINE Alu 1 296 -16 2203 101 0 9 chr18 32044473 32044789 -53944145 + AluSq SINE Alu 1 313 0 544 218 69 167 chr18 32044789 32044804 -53944130 - L1 LINE L1 -2558 3588 3573 812 164 0 0 chr18 32044804 32044926 -53944008 + FLAM_C SINE Alu 1 122 -11 544 218 69 167 chr18 32044926 32045043 -53943891 - L1 LINE L1 -2573 3573 3503 1612 157 0 54 chr18 32045043 32045380 -53943554 - AluJb SINE Alu 0 312 1 544 218 69 167 chr18 32045380 32045410 -53943524 - L1 LINE L1 -2643 3503 3472 6904 23 0 359 chr18 32045436 32047599 -53941335 + SVA Other Other 1 1386 0 1340 165 9 142 chr18 32047663 32048009 -53940925 - AluJo SINE Alu -2 300 1 2348 52 10 0 chr18 32049649 32049938 -53938996 - AluY SINE Alu -19 292 1 1851 98 7 47 chr18 32050386 32050525 -53938409 + AluSx SINE Alu 1 144 -171 1986 109 3 3 chr18 32050525 32050810 -53938124 + AluSg SINE Alu 3 287 -23 2191 97 10 0 chr18 32050813 32051112 -53937822 + AluSp SINE Alu 1 302 -11 1851 98 7 47 chr18 32051112 32051295 -53937639 + AluSx SINE Alu 146 315 0 2261 125 39 0 chr18 32051496 32051857 -53937077 - THE1C LTR MaLR 0 375 1 1314 158 87 9 chr18 32052257 32052610 -53936324 - MER21B LTR ERV1 -390 473 57 199 240 20 0 chr18 32052620 32052670 -53936264 - L2 LINE L2 -38 3234 3184 1990 138 0 0 chr18 32053889 32054186 -53934748 - AluSg SINE Alu -13 297 1 25 0 0 0 chr18 32054241 32054266 -53934668 + AT_rich Low_complexity Low_complexity 1 25 0 1993 118 17 0 chr18 32054363 32054651 -53934283 + AluSq SINE Alu 6 298 -15 536 258 94 6 chr18 32054695 32054854 -53934080 - MIR SINE MIR 0 262 90 1642 179 14 3 chr18 32054947 32055238 -53933696 - AluJo SINE Alu -18 294 1 2046 96 7 0 chr18 32055637 32055917 -53933017 + AluSq SINE Alu 1 282 -31 391 118 117 25 chr18 32055917 32056007 -53932927 - Alu SINE Alu -19 282 234 2060 108 7 0 chr18 32057387 32057673 -53931261 + AluSx SINE Alu 2 289 -23 1058 118 0 0 chr18 32057957 32058109 -53930825 - AluSg/x SINE Alu -32 277 126 275 212 30 15 chr18 32058209 32058275 -53930659 + L2 LINE L2 3175 3241 -31 2266 103 0 0 chr18 32058312 32058612 -53930322 + AluSx SINE Alu 1 300 -12 1263 95 6 0 chr18 32059182 32059351 -53929583 + AluSp SINE Alu 1 170 -143 5356 116 4 9 chr18 32059451 32060239 -53928695 + HERVH LTR ERV1 2047 2830 -4883 4300 199 9 19 chr18 32060239 32061508 -53927426 + HERVH LTR ERV1 3357 4552 -2735 1624 142 0 0 chr18 32061498 32061759 -53927175 + HERVH LTR ERV1 5756 6016 -1697 * 3551 119 5 31 chr18 32061752 32062324 -53926610 + HERVH LTR ERV1 7157 7713 0 773 138 126 23 chr18 32062324 32062482 -53926452 + LTR7 LTR ERV1 1 218 -232 356 135 0 0 chr18 32062611 32062663 -53926271 + LTR7 LTR ERV1 391 442 -8 244 283 43 33 chr18 32062717 32062809 -53926125 - MLT1K LTR MaLR -494 94 2 240 376 0 0 chr18 32062817 32062902 -53926032 + L2 LINE L2 3187 3271 -1 382 229 159 13 chr18 32062917 32063074 -53925860 - MIR SINE MIR -6 256 77 2058 119 3 0 chr18 32063158 32063460 -53925474 + AluSq SINE Alu 1 303 -10 280 235 133 10 chr18 32063463 32063561 -53925373 + L1M4 LINE L1 4478 4587 -1559 283 122 20 0 chr18 32063648 32063697 -53925237 + Alu SINE Alu 3 52 -250 2341 51 3 3 chr18 32063906 32064201 -53924733 - AluY SINE Alu -16 295 1 231 279 0 59 chr18 32065146 32065246 -53923688 + MIR SINE MIR 44 135 -107 1600 165 171 65 chr18 32065252 32065748 -53923186 - LTR49 LTR ERV1 -46 549 1 903 190 6 0 chr18 32065795 32065969 -53922965 - AluJb SINE Alu -3 309 135 1904 154 0 0 chr18 32065969 32066274 -53922660 - AluSx SINE Alu -7 305 1 1235 156 76 13 chr18 32066275 32066513 -53922421 - LTR49-int LTR ERV1 -1090 5241 4989 1996 114 0 0 chr18 32066614 32066923 -53922011 - AluSx SINE Alu 0 309 1 728 242 31 35 chr18 32066990 32067250 -53921684 + MIR SINE MIR 2 260 -2 1634 156 18 0 chr18 32067250 32067525 -53921409 + AluJo SINE Alu 1 280 -32 281 257 72 86 chr18 32067538 32067681 -53921253 - L1ME LINE L1 -291 5830 5690 2051 109 0 16 chr18 32067681 32067985 -53920949 + AluSx SINE Alu 1 299 -13 281 257 72 86 chr18 32067985 32068063 -53920871 - L1ME LINE L1 -431 5690 5612 2194 96 0 0 chr18 32068087 32068378 -53920556 + AluSc SINE Alu 1 291 -18 788 98 0 148 chr18 32068378 32068390 -53920544 - L1PA7 LINE L1 -17 6137 6125 195 42 0 0 chr18 32068390 32068414 -53920520 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 788 98 0 148 chr18 32068414 32068574 -53920360 - L1PA7 LINE L1 -29 6125 5991 470 163 0 0 chr18 32068576 32068662 -53920272 - FLAM_C SINE Alu -3 140 55 899 209 19 44 chr18 32068753 32068959 -53919975 + LTR31 LTR ERV1 127 327 -292 706 167 0 38 chr18 32068970 32069156 -53919778 + CT-rich Low_complexity Low_complexity 2 180 0 867 186 60 0 chr18 32069164 32069347 -53919587 - AluJo SINE Alu 0 312 119 1306 239 10 10 chr18 32069349 32069626 -53919308 + LTR31 LTR ERV1 331 610 -9 5171 77 27 4 chr18 32069626 32070302 -53918632 - LTR8 LTR ERV1 0 691 1 354 244 23 23 chr18 32070302 32070388 -53918546 - AluSg/x SINE Alu -97 205 120 247 222 22 56 chr18 32070554 32070644 -53918290 + (CATATA)n Simple_repeat Simple_repeat 2 88 0 419 241 46 21 chr18 32070656 32070798 -53918136 - L1MC4a LINE L1 -250 5924 5778 542 75 0 0 chr18 32070798 32070896 -53918038 - AluSc SINE Alu 0 312 215 347 166 72 196 chr18 32070896 32070953 -53917981 - L1MC4a LINE L1 -333 5788 5726 1386 187 14 24 chr18 32070953 32071275 -53917659 + AluJo SINE Alu 1 319 0 347 166 72 196 chr18 32071275 32071421 -53917513 - L1MC4a LINE L1 -395 5726 5599 1424 152 0 4 chr18 32071858 32072134 -53916800 + AluJb SINE Alu 83 357 0 629 168 23 76 chr18 32072156 32072264 -53916670 + AluJo/FLAM SINE Alu 2 103 -209 1483 132 171 12 chr18 32072264 32072521 -53916413 - AluSc SINE Alu 0 299 2 629 168 23 76 chr18 32072521 32072543 -53916391 + AluJo/FLAM SINE Alu 103 125 -187 200 327 130 31 chr18 32072649 32072811 -53916123 + MIR SINE MIR 1 178 -84 1609 181 36 10 chr18 32072962 32073266 -53915668 + AluJo SINE Alu 1 312 0 1877 150 0 3 chr18 32073296 32073602 -53915332 + AluSc SINE Alu 1 305 -4 781 246 207 62 chr18 32073816 32074260 -53914674 + MLT1L LTR MaLR 11 542 -73 2019 111 0 7 chr18 32074260 32074548 -53914386 - AluSg SINE Alu -18 292 7 781 246 207 62 chr18 32074548 32074619 -53914315 + MLT1L LTR MaLR 542 601 -14 1416 315 113 41 chr18 32074621 32074877 -53914057 - L2 LINE L2 -502 2812 2576 2116 95 0 17 chr18 32074877 32075171 -53913763 + AluSg SINE Alu 5 293 -17 1416 315 113 41 chr18 32075171 32075971 -53912963 - L2 LINE L2 -738 2576 1680 262 286 68 30 chr18 32076038 32076171 -53912763 + L2 LINE L2 2916 3053 -219 1416 143 27 104 chr18 32076277 32076612 -53912322 - AluYb8 SINE Alu -9 309 1 1785 100 85 0 chr18 32076614 32076885 -53912049 - AluSx SINE Alu -18 294 1 672 201 122 0 chr18 32076888 32077027 -53911907 - FRAM SINE Alu -10 156 1 305 102 20 0 chr18 32077152 32077201 -53911733 + L1MD1 LINE L1 6174 6223 -19 325 351 18 0 chr18 32077220 32077334 -53911600 + L2 LINE L2 3157 3272 0 990 73 0 40 chr18 32077336 32077487 -53911447 - AluSq/x SINE Alu -168 145 1 279 0 0 0 chr18 32079353 32079384 -53909550 + (TG)n Simple_repeat Simple_repeat 2 32 0 1755 84 0 59 chr18 32079400 32079673 -53909261 - AluSx SINE Alu -30 282 26 1945 122 0 21 chr18 32079820 32080137 -53908797 - AluSx SINE Alu 0 312 2 279 297 0 0 chr18 32080291 32080355 -53908579 + L2 LINE L2 3230 3293 -20 180 0 0 0 chr18 32080355 32080375 -53908559 + (A)n Simple_repeat Simple_repeat 1 20 0 278 277 64 21 chr18 32080474 32080568 -53908366 - MIR3 SINE MIR -26 182 85 814 130 7 22 chr18 32080688 32080826 -53908108 - AluJb SINE Alu -176 136 1 383 268 27 0 chr18 32081337 32081449 -53907485 + MER103 DNA DNA 44 158 -8 1191 104 0 0 chr18 32081614 32081778 -53907156 - AluSg/x SINE Alu -16 296 133 2243 81 0 19 chr18 32081779 32082086 -53906848 - AluSp SINE Alu -12 301 1 399 280 47 9 chr18 32082099 32082206 -53906728 + L2 LINE L2 3158 3268 -4 389 0 39 0 chr18 32082290 32082342 -53906592 + (TTTTG)n Simple_repeat Simple_repeat 2 180 0 1946 120 3 31 chr18 32082342 32082633 -53906301 - AluSx SINE Alu -29 283 1 295 276 51 20 chr18 32083307 32083405 -53905529 - MER94 DNA DNA -24 110 10 2190 117 3 0 chr18 32084023 32084314 -53904620 - AluSx SINE Alu -20 292 1 604 270 104 9 chr18 32084340 32084551 -53904383 - MIR SINE MIR -12 250 20 312 330 46 0 chr18 32084986 32085095 -53903839 + MIR SINE MIR 28 141 -121 349 222 0 0 chr18 32085151 32085214 -53903720 + MLT1L LTR MaLR 141 203 -412 1546 174 31 44 chr18 32085239 32085561 -53903373 + MLT1A2 LTR MaLR 5 574 -52 2066 129 10 0 chr18 32085601 32085903 -53903031 + AluSp SINE Alu 1 305 -8 1307 112 6 6 chr18 32086143 32086361 -53902573 + AluSp SINE Alu 107 324 0 23 33 0 0 chr18 32087169 32087199 -53901735 + AT_rich Low_complexity Low_complexity 1 30 0 2059 101 51 0 chr18 32087199 32087475 -53901459 - AluSg SINE Alu -20 290 1 2061 147 7 0 chr18 32087475 32087775 -53901159 - AluSx SINE Alu -10 302 1 2440 65 0 49 chr18 32088001 32088326 -53900608 - AluY SINE Alu -2 309 1 2083 144 0 6 chr18 32088530 32088842 -53900092 - AluSx SINE Alu -2 310 1 2455 73 7 0 chr18 32089568 32089868 -53899066 + AluSp SINE Alu 1 302 -11 1998 141 3 3 chr18 32090233 32090524 -53898410 - AluSx SINE Alu -21 291 1 701 239 88 41 chr18 32090732 32091085 -53897849 + LTR16A LTR ERVL 51 431 -26 860 131 7 29 chr18 32091092 32091229 -53897705 + FRAM SINE Alu 23 156 -20 2233 110 0 3 chr18 32091253 32091545 -53897389 + AluSc SINE Alu 1 291 -18 2412 86 3 0 chr18 32091603 32091925 -53897009 + AluSp SINE Alu 1 323 0 823 271 18 9 chr18 32091936 32092161 -53896773 - MIR SINE MIR -16 246 20 2211 138 0 0 chr18 32092828 32093140 -53895794 + AluSx SINE Alu 1 312 0 2142 105 0 69 chr18 32094151 32094296 -53894638 + AluSx SINE Alu 1 154 -158 2326 75 3 0 chr18 32094296 32094578 -53894356 + AluSp SINE Alu 11 293 -20 2142 105 0 69 chr18 32094578 32094765 -53894169 + AluSx SINE Alu 154 310 -2 218 290 169 0 chr18 32094848 32094972 -53893962 + MIR SINE MIR 96 240 -22 1146 136 0 6 chr18 32095659 32095835 -53893099 + AluSg/x SINE Alu 135 309 -3 2355 102 0 0 chr18 32095975 32096268 -53892666 + AluSc SINE Alu 1 293 -16 1058 162 233 24 chr18 32096335 32096588 -53892346 - AluJo SINE Alu -4 308 3 264 330 10 10 chr18 32096789 32096889 -53892045 + MIR3 SINE MIR 105 204 -4 2120 98 4 4 chr18 32096964 32097240 -53891694 - AluSp SINE Alu -36 277 2 478 248 124 6 chr18 32097947 32098108 -53890826 + MER5A DNA MER1_type 10 189 0 195 42 0 0 chr18 32098392 32098416 -53890518 + (TCCC)n Simple_repeat Simple_repeat 4 27 0 495 115 0 0 chr18 32098416 32098494 -53890440 - AluS SINE Alu -2 310 233 2063 112 0 0 chr18 32098496 32098765 -53890169 - AluSx SINE Alu -43 269 1 2336 97 3 0 chr18 32098923 32099223 -53889711 - AluSp SINE Alu -12 301 1 1394 144 82 112 chr18 32099580 32100044 -53888890 + LTR7 LTR ERV1 1 450 0 4079 195 58 78 chr18 32100044 32102149 -53886785 + HERVH LTR ERV1 1 2032 -5681 377 151 0 14 chr18 32102255 32102328 -53886606 + GA-rich Low_complexity Low_complexity 2 73 0 1969 119 0 4 chr18 32103015 32103292 -53885642 - AluY SINE Alu -5 306 31 1119 121 77 148 chr18 32103292 32103590 -53885344 + LTR12 LTR ERV1 1 277 -437 297 267 0 0 chr18 32103590 32103665 -53885269 + LTR30 LTR ERV1 544 618 -104 2123 128 3 3 chr18 32103695 32104000 -53884934 - AluSx SINE Alu -7 305 1 271 336 9 9 chr18 32104302 32104415 -53884519 - L2 LINE L2 -497 2817 2705 2149 130 0 0 chr18 32104416 32104717 -53884217 - AluSx SINE Alu -11 301 1 741 133 0 0 chr18 32104900 32105013 -53883921 - AluSg/x SINE Alu -2 308 196 989 175 29 0 chr18 32105176 32105347 -53883587 - LTR49-int LTR ERV1 -4364 1967 1792 359 164 154 89 chr18 32105345 32105487 -53883447 - LTR49-int LTR ERV1 -4554 1728 299 * 936 92 0 0 chr18 32105490 32105610 -53883324 - AluSg/x SINE Alu -14 296 177 2111 118 30 0 chr18 32105666 32105963 -53882971 - AluSx SINE Alu -6 306 1 396 209 0 0 chr18 32106573 32106640 -53882294 - tRNA-Glu-GAG tRNA tRNA -2 73 7 23 0 0 0 chr18 32106651 32106674 -53882260 + AT_rich Low_complexity Low_complexity 1 23 0 475 179 21 32 chr18 32106685 32106780 -53882154 - LTR49-int LTR ERV1 -5149 1182 1089 909 183 150 110 chr18 32107177 32107440 -53881494 - LTR49 LTR ERV1 -55 540 254 2705 52 0 0 chr18 32107440 32107749 -53881185 + AluY SINE Alu 1 309 -2 909 183 150 110 chr18 32107749 32107884 -53881050 - LTR49 LTR ERV1 -341 254 126 1635 143 124 4 chr18 32107988 32108254 -53880680 - AluSx SINE Alu -14 298 1 264 184 0 0 chr18 32108270 32108319 -53880615 + MIR SINE MIR 97 145 -117 1729 164 31 7 chr18 32108746 32109033 -53879901 + AluJb SINE Alu 1 294 -18 2214 87 13 13 chr18 32109434 32109743 -53879191 - AluSx SINE Alu -2 310 2 811 104 0 0 chr18 32109971 32110086 -53878848 + MER4B LTR ERV1 1 115 -495 563 161 99 87 chr18 32110095 32110256 -53878678 - MSTD LTR MaLR -31 365 203 586 121 0 11 chr18 32110266 32110357 -53878577 - FLAM_A SINE Alu -7 135 46 758 249 12 6 chr18 32110365 32110538 -53878396 - MSTD LTR MaLR -212 184 11 237 273 30 0 chr18 32110689 32110755 -53878179 + MIR SINE MIR 81 148 -60 234 0 0 0 chr18 32110888 32110914 -53878020 + (A)n Simple_repeat Simple_repeat 1 26 0 1942 97 37 47 chr18 32111299 32111468 -53877466 - AluSx SINE Alu -16 296 130 2043 113 0 20 chr18 32111468 32111780 -53877154 - AluSx SINE Alu 0 312 1 1942 97 37 47 chr18 32111780 32111909 -53877025 - AluSx SINE Alu -182 130 1 996 84 45 62 chr18 32112113 32112292 -53876642 + AluSg/x SINE Alu 135 310 0 1440 132 14 14 chr18 32112728 32112941 -53875993 + AluSg/x SINE Alu 84 296 -16 2142 104 7 0 chr18 32112943 32113245 -53875689 + AluSp SINE Alu 3 306 0 324 246 71 24 chr18 32113854 32113980 -53874954 + MIR SINE MIR 85 216 -46 2051 104 49 7 chr18 32114033 32114321 -53874613 + AluSx SINE Alu 1 300 -12 300 189 0 0 chr18 32114592 32114645 -53874289 - MLT1K LTR MaLR -525 63 11 936 206 62 5 chr18 32114880 32115125 -53873809 + L1ME3A LINE L1 5713 5970 -200 428 222 157 32 chr18 32115230 32115273 -53873661 + L1ME3A LINE L1 5963 5999 -171 2387 103 0 3 chr18 32115273 32115583 -53873351 + AluSq SINE Alu 1 309 -4 428 222 157 32 chr18 32115583 32115724 -53873210 + L1ME3A LINE L1 5999 6170 0 820 193 9 75 chr18 32115971 32116184 -53872750 + AluJo SINE Alu 91 289 -23 1216 153 0 0 chr18 32116186 32116363 -53872571 + AluSx SINE Alu 1 177 -135 1708 187 147 23 chr18 32116363 32116845 -53872089 - LTR10B LTR ERV1 0 547 6 1298 182 24 7 chr18 32116850 32117136 -53871798 - LTR10B-int LTR ERV1 0 6649 6254 1613 185 0 7 chr18 32117143 32117424 -53871510 - HERVI LTR ERV1 -895 6890 6612 8851 190 18 21 chr18 32117462 32119554 -53869380 - HERVI LTR ERV1 -1950 5835 2720 867 219 6 17 chr18 32119545 32119723 -53869211 - HERVI LTR ERV1 -4182 3603 3428 * 267 214 0 0 chr18 32119760 32119816 -53869118 - HERVI LTR ERV1 -5682 2103 2048 * 277 298 0 0 chr18 32119801 32119885 -53869049 - HERVI LTR ERV1 -4935 1714 1631 3067 228 60 23 chr18 32119911 32120786 -53868148 - HERVI LTR ERV1 -5252 1729 510 1282 178 101 8 chr18 32120789 32121047 -53867887 - HERVI LTR ERV1 -6357 292 11 1704 194 100 35 chr18 32121048 32121558 -53867376 - LTR10B LTR ERV1 -4 543 1 1103 75 0 0 chr18 32121558 32121692 -53867242 + AluSx SINE Alu 174 307 -5 1533 145 0 0 chr18 32121836 32122078 -53866856 - L1PA15 LINE L1 0 6165 5924 2068 122 0 21 chr18 32122329 32122646 -53866288 - AluSx SINE Alu 0 312 2 256 297 0 0 chr18 32122800 32122864 -53866070 + L2 LINE L2 3230 3293 -20 1371 148 43 9 chr18 32123187 32123417 -53865517 + AluJo SINE Alu 54 291 -21 182 206 0 0 chr18 32123519 32123553 -53865381 + MIR SINE MIR 211 244 -18 2192 113 3 28 chr18 32123774 32124093 -53864841 - AluSx SINE Alu -1 311 1 2332 114 7 0 chr18 32124276 32124584 -53864350 - AluSx SINE Alu -2 310 1 237 270 9 36 chr18 32125444 32125555 -53863379 + CT-rich Low_complexity Low_complexity 4 111 0 2843 10 0 0 chr18 32125635 32125941 -53862993 - AluYa5 SINE Alu -5 306 1 2339 96 0 0 chr18 32126882 32127174 -53861760 + AluSx SINE Alu 5 296 -16 2224 96 0 0 chr18 32128006 32128316 -53860618 - AluSg SINE Alu 0 310 1 1017 176 29 17 chr18 32128316 32128554 -53860380 - MER33 DNA MER1_type -13 311 71 512 152 0 0 chr18 32128554 32128633 -53860301 - AluSp/q SINE Alu -14 299 221 1882 157 17 7 chr18 32128852 32129152 -53859782 + AluSx SINE Alu 3 305 -7 233 120 360 0 chr18 32129222 32129272 -53859662 + MER3 DNA MER1_type 45 112 -97 * 323 146 0 0 chr18 32129239 32129287 -53859647 + MER33 DNA MER1_type 33 80 -244 2272 101 0 10 chr18 32129288 32129594 -53859340 + AluSx SINE Alu 1 303 -9 1549 128 9 0 chr18 32130030 32130257 -53858677 + AluSg/x SINE Alu 84 312 0 2591 50 3 7 chr18 32130328 32130629 -53858305 + AluY SINE Alu 1 300 -11 817 163 116 29 chr18 32130901 32131048 -53857886 - AluJb SINE Alu -12 300 134 2052 103 23 10 chr18 32131048 32131349 -53857585 - AluSc SINE Alu -4 305 1 817 163 116 29 chr18 32131349 32131373 -53857561 - AluJb SINE Alu -178 134 114 268 291 0 12 chr18 32131473 32131567 -53857367 - L1ME LINE L1 -516 5605 5516 241 178 41 14 chr18 32131783 32131856 -53857078 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 1828 147 7 14 chr18 32131857 32132142 -53856792 + AluSx SINE Alu 1 283 -29 2409 89 0 37 chr18 32132142 32132466 -53856468 + AluSq SINE Alu 1 312 -1 737 228 17 11 chr18 32132492 32132672 -53856262 - MIR SINE MIR -77 185 5 191 333 71 0 chr18 32133348 32133432 -53855502 + MIR SINE MIR 116 205 -57 1527 173 6 80 chr18 32134337 32134650 -53854284 - AluJo SINE Alu -20 292 3 25 0 0 0 chr18 32134650 32134675 -53854259 + AT_rich Low_complexity Low_complexity 1 25 0 602 298 45 90 chr18 32134856 32134892 -53854042 + L2 LINE L2 2944 2980 -292 876 115 0 43 chr18 32134892 32135031 -53853903 - FLAM_C SINE Alu 0 133 1 602 298 45 90 chr18 32135031 32135306 -53853628 + L2 LINE L2 2980 3241 -31 2331 107 0 0 chr18 32135343 32135642 -53853292 + AluSx SINE Alu 1 299 -13 1015 107 0 0 chr18 32136076 32136207 -53852727 - AluSq/x SINE Alu -182 131 1 6090 127 10 1 chr18 32136209 32137352 -53851582 - L1MA3 LINE L1 -170 6135 4981 715 221 0 0 chr18 32138448 32138575 -53850359 + FLAM_A SINE Alu 9 135 -7 2398 56 7 0 chr18 32138597 32138885 -53850049 - AluY SINE Alu -21 290 1 207 347 24 65 chr18 32138906 32139030 -53849904 + L2 LINE L2 3137 3255 -17 333 370 64 12 chr18 32139036 32139285 -53849649 + L2 LINE L2 2810 3071 -201 186 361 0 16 chr18 32139506 32139567 -53849367 - L2 LINE L2 -54 3218 3159 408 296 255 0 chr18 32139609 32139805 -53849129 - MIR SINE MIR -12 250 5 351 286 82 35 chr18 32140291 32140462 -53848472 + MIR SINE MIR 58 236 -26 2865 210 39 15 chr18 32140481 32140499 -53848435 + L1MD2 LINE L1 5315 5331 -837 2340 99 0 22 chr18 32140499 32140813 -53848121 + AluSq SINE Alu 1 307 -6 2865 210 39 15 chr18 32140813 32141479 -53847455 + L1MD2 LINE L1 5331 6003 -165 1892 112 38 51 chr18 32141531 32141845 -53847089 - AluSx SINE Alu 0 312 3 358 115 0 0 chr18 32141845 32141897 -53847037 - MSTA LTR MaLR -375 53 2 279 79 0 0 chr18 32141947 32141985 -53846949 + (T)n Simple_repeat Simple_repeat 1 38 0 359 167 17 0 chr18 32141999 32142059 -53846875 - AluSq SINE Alu -114 189 129 296 197 0 15 chr18 32142063 32142129 -53846805 - MSTA LTR MaLR -363 65 1 1187 150 0 42 chr18 32142180 32142393 -53846541 - AluSx SINE Alu -108 204 1 291 270 111 42 chr18 32142393 32142582 -53846352 + L1ME LINE L1 5604 5805 -316 1915 134 14 0 chr18 32142778 32143097 -53845837 - AluSq SINE Alu 0 327 5 2255 86 3 0 chr18 32143104 32143396 -53845538 - AluSc SINE Alu -16 293 1 2280 98 0 30 chr18 32143733 32144038 -53844896 + AluSx SINE Alu 1 296 -16 449 289 54 0 chr18 32144177 32144326 -53844608 + MIR SINE MIR 64 220 -42 2373 60 0 3 chr18 32144536 32144820 -53844114 + AluY SINE Alu 1 283 -28 327 253 130 32 chr18 32145052 32145206 -53843728 - MIR SINE MIR -19 243 75 977 223 0 0 chr18 32145515 32145681 -53843253 - FRAM SINE Alu 0 166 1 1077 222 0 0 chr18 32145703 32145892 -53843042 + MER5A DNA MER1_type 1 189 0 361 343 112 53 chr18 32145922 32146032 -53842902 + L3 LINE CR1 792 894 -683 2191 122 0 7 chr18 32146032 32146336 -53842598 + AluSp SINE Alu 1 302 -11 361 343 112 53 chr18 32146336 32146581 -53842353 + L3 LINE CR1 894 1168 -409 199 310 35 0 chr18 32146652 32146710 -53842224 + L3 LINE CR1 1511 1570 -7 2224 91 3 32 chr18 32147029 32147338 -53841596 - AluSp SINE Alu -13 300 1 25 0 0 0 chr18 32147636 32147661 -53841273 + AT_rich Low_complexity Low_complexity 1 25 0 2481 73 7 0 chr18 32147662 32147965 -53840969 - AluSp SINE Alu -8 305 1 1419 175 71 26 chr18 32147980 32148288 -53840646 + THE1C LTR MaLR 46 367 -8 1903 155 0 7 chr18 32148343 32148647 -53840287 - AluJo SINE Alu -10 302 1 225 326 85 28 chr18 32148744 32148885 -53840049 + L2 LINE L2 3147 3295 -18 2135 124 3 0 chr18 32149269 32149575 -53839359 + AluSq SINE Alu 1 307 -6 1527 153 71 39 chr18 32149881 32150163 -53838771 - AluJb SINE Alu -18 294 4 1708 148 11 0 chr18 32150277 32150541 -53838393 - AluSp SINE Alu -8 305 39 197 232 320 32 chr18 32150783 32150908 -53838026 + MIR3 SINE MIR 41 201 -7 2305 91 0 23 chr18 32151555 32151862 -53837072 + AluSg SINE Alu 1 300 -10 437 254 28 39 chr18 32152370 32152551 -53836383 - L1MC5 LINE L1 -420 7541 7363 198 0 0 0 chr18 32152659 32152681 -53836253 + (TC)n Simple_repeat Simple_repeat 1 22 0 2104 128 24 0 chr18 32152681 32152979 -53835955 - AluSx SINE Alu -7 305 1 1073 98 0 0 chr18 32152979 32153112 -53835822 - AluSg SINE Alu -177 133 1 2349 84 3 7 chr18 32153346 32153644 -53835290 - AluSp SINE Alu -15 298 2 189 0 0 0 chr18 32153774 32153795 -53835139 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 2084 109 4 0 chr18 32153799 32154074 -53834860 - AluSx SINE Alu -35 277 2 1544 163 74 7 chr18 32154544 32154662 -53834272 + AluJo SINE Alu 1 110 -202 216 86 0 0 chr18 32154662 32154697 -53834237 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1544 163 74 7 chr18 32154697 32154848 -53834086 + AluJo SINE Alu 110 288 -24 29 0 0 0 chr18 32154849 32154878 -53834056 + AT_rich Low_complexity Low_complexity 1 29 0 1182 178 23 23 chr18 32155952 32156171 -53832763 + MER20 DNA MER1_type 1 219 0 371 256 44 0 chr18 32156898 32156988 -53831946 - MLT1I LTR MaLR -260 149 56 2477 97 0 0 chr18 32157176 32157484 -53831450 - AluSx SINE Alu -4 308 1 279 237 54 21 chr18 32157653 32157746 -53831188 + MER5A DNA MER1_type 7 102 -87 322 274 57 0 chr18 32157792 32157898 -53831036 + L2 LINE L2 2543 2654 -660 1086 90 0 0 chr18 32157917 32158050 -53830884 + AluSq/x SINE Alu 1 133 -180 2398 96 3 0 chr18 32158053 32158354 -53830580 + AluSp SINE Alu 1 302 -11 269 247 10 82 chr18 32158355 32158452 -53830482 + L2 LINE L2 2666 2755 -559 1661 186 23 10 chr18 32158945 32159252 -53829682 - AluJo SINE Alu -1 311 1 750 306 91 35 chr18 32159264 32159765 -53829169 + L2 LINE L2 2766 3298 -15 681 113 35 70 chr18 32159857 32159972 -53828962 + FAM SINE Alu 47 157 -28 2213 92 3 61 chr18 32159976 32160302 -53828632 - AluSx SINE Alu -5 307 1 2015 148 3 3 chr18 32160434 32160731 -53828203 - AluJb SINE Alu -15 297 1 248 253 136 65 chr18 32160874 32161028 -53827906 + L1MB2 LINE L1 5609 5773 -348 1047 165 0 17 chr18 32161130 32161306 -53827628 + FRAM SINE Alu 1 171 -5 212 254 48 0 chr18 32161472 32161535 -53827399 + L2 LINE L2 2898 2963 -309 1122 191 13 43 chr18 32161760 32162056 -53826878 - MLT1A2 LTR MaLR 0 374 1 211 319 22 33 chr18 32162182 32162273 -53826661 + L2 LINE L2 3220 3309 -4 2278 85 0 0 chr18 32162663 32162970 -53825964 - AluSx SINE Alu 0 307 1 640 179 114 0 chr18 32163207 32163347 -53825587 + L1MB2 LINE L1 5965 6120 -51 1372 76 71 0 chr18 32163349 32163533 -53825401 + AluY SINE Alu 101 297 -14 2084 114 0 29 chr18 32163546 32163852 -53825082 + AluSg SINE Alu 1 297 -13 244 196 0 0 chr18 32163852 32163903 -53825031 + L1MB2 LINE L1 6121 6171 0 630 146 16 49 chr18 32164228 32164351 -53824583 - MLT1B LTR MaLR -269 121 3 457 110 0 49 chr18 32164354 32164436 -53824498 + LTR41 LTR ERVL 690 767 -6 779 280 68 63 chr18 32164648 32164767 -53824167 + MLT1L LTR MaLR 173 290 -325 1749 164 13 26 chr18 32164767 32164900 -53824034 + AluJb SINE Alu 1 134 -178 2227 102 7 0 chr18 32164900 32165193 -53823741 + AluSp SINE Alu 1 295 -18 1749 164 13 26 chr18 32165193 32165363 -53823571 + AluJb SINE Alu 134 300 -12 818 175 48 0 chr18 32165372 32165498 -53823436 + FLAM_A SINE Alu 2 133 0 779 280 68 63 chr18 32165498 32165797 -53823137 + MLT1L LTR MaLR 297 603 -12 423 295 62 62 chr18 32165808 32165994 -53822940 + LTR33A LTR ERVL 1 185 -336 2167 118 3 3 chr18 32165994 32166299 -53822635 - AluSq SINE Alu -6 307 3 393 22 0 0 chr18 32166299 32166345 -53822589 + (TC)n Simple_repeat Simple_repeat 2 47 0 423 295 62 62 chr18 32166345 32166407 -53822527 + LTR33A LTR ERVL 184 288 -233 229 282 34 51 chr18 32166457 32166574 -53822360 + LTR33A LTR ERVL 400 514 -9 2041 117 4 0 chr18 32167333 32167645 -53821289 - AluSx SINE Alu 0 313 1 200 253 13 0 chr18 32167694 32167769 -53821165 + CT-rich Low_complexity Low_complexity 1 76 0 1797 165 32 3 chr18 32167804 32168089 -53820845 - AluJo SINE Alu -19 293 1 532 107 0 0 chr18 32169242 32169317 -53819617 + LTR23 LTR ERV1 329 403 -34 23 33 0 0 chr18 32169326 32169356 -53819578 + AT_rich Low_complexity Low_complexity 1 30 0 213 178 0 0 chr18 32169358 32169403 -53819531 + (TG)n Simple_repeat Simple_repeat 2 46 0 2174 139 46 16 chr18 32170004 32170372 -53818562 + MER21A LTR ERV1 553 931 0 1840 182 90 43 chr18 32170381 32170804 -53818130 + LTR47B LTR ERVL 1 443 0 1959 142 10 6 chr18 32171220 32171531 -53817403 - AluSx SINE Alu 0 312 1 2117 143 0 0 chr18 32172695 32172996 -53815938 + AluSx SINE Alu 1 301 -11 2172 106 13 0 chr18 32173698 32173999 -53814935 - AluSx SINE Alu -7 305 1 338 132 0 0 chr18 32174008 32174061 -53814873 - Alu SINE Alu 0 302 250 271 143 0 0 chr18 32174091 32174167 -53814767 + Alu SINE Alu 243 318 0 216 238 0 0 chr18 32175446 32175488 -53813446 + (CCG)n Simple_repeat Simple_repeat 2 43 0 203 241 0 38 chr18 32175803 32175882 -53813052 + (CCCG)n Simple_repeat Simple_repeat 2 77 0 * 219 217 0 0 chr18 32175837 32175883 -53813051 + CT-rich Low_complexity Low_complexity 4 49 0 313 275 20 57 chr18 32176564 32176684 -53812250 + MER5A DNA MER1_type 15 138 -48 1098 36 0 29 chr18 32176685 32176822 -53812112 - AluY SINE Alu -178 133 1 684 146 10 0 chr18 32177235 32177338 -53811596 + U13 snRNA snRNA 1 104 0 1612 194 0 7 chr18 32177910 32178203 -53810731 - AluJb SINE Alu -21 291 1 1654 154 33 33 chr18 32179456 32179762 -53809172 - AluJo SINE Alu -5 307 2 27 22 0 22 chr18 32180199 32180228 -53808706 + AT_rich Low_complexity Low_complexity 1 30 -14 1710 120 12 120 chr18 32180228 32180554 -53808380 - AluSx SINE Alu -21 291 1 27 22 0 22 chr18 32180554 32180569 -53808365 + AT_rich Low_complexity Low_complexity 30 44 0 579 155 0 0 chr18 32180606 32180709 -53808225 + (TG)n Simple_repeat Simple_repeat 2 104 0 1326 113 11 0 chr18 32180821 32180998 -53807936 - AluSx SINE Alu -133 179 1 904 256 4 36 chr18 32181284 32181561 -53807373 - AluJo SINE Alu -44 268 1 385 307 29 0 chr18 32181653 32181793 -53807141 + L1M4 LINE L1 4072 4215 -1931 419 275 116 16 chr18 32181830 32182201 -53806733 + L1M4 LINE L1 4298 4705 -1441 33 43 0 0 chr18 32182290 32182337 -53806597 + AT_rich Low_complexity Low_complexity 1 47 0 2179 109 7 0 chr18 32182344 32182638 -53806296 - AluSx SINE Alu -16 296 1 236 314 93 31 chr18 32182666 32182892 -53806042 + L1M4 LINE L1 4795 5034 -1112 458 252 68 34 chr18 32183625 32183772 -53805162 - HAL1 LINE L1 -919 1588 1437 2275 88 0 7 chr18 32183784 32183797 -53805137 - AluY SINE Alu -16 295 283 286 29 0 0 chr18 32183797 32183831 -53805103 + (TTTA)n Simple_repeat Simple_repeat 3 84 0 2275 88 0 7 chr18 32183831 32184114 -53804820 - AluY SINE Alu -28 283 1 2128 109 13 13 chr18 32184357 32184669 -53804265 - AluSx SINE Alu 0 312 1 2105 97 14 4 chr18 32184759 32185064 -53803870 - AluSg SINE Alu 0 308 1 1983 123 28 0 chr18 32185119 32185403 -53803531 - AluSx SINE Alu -20 292 1 1578 209 52 56 chr18 32185407 32185910 -53803024 - L1ME3A LINE L1 -6 6164 5664 1391 169 64 52 chr18 32185941 32186208 -53802726 - AluJo SINE Alu -34 278 9 473 192 184 22 chr18 32186234 32186390 -53802544 - L1ME3A LINE L1 -518 5652 5469 1702 162 76 0 chr18 32186390 32186680 -53802254 - AluJb SINE Alu 0 312 1 689 213 0 0 chr18 32186698 32186820 -53802114 - FLAM_A SINE Alu -10 123 2 1908 157 7 0 chr18 32186855 32187155 -53801779 + AluJb SINE Alu 2 303 -9 1707 163 3 24 chr18 32187247 32187541 -53801393 - AluJo SINE Alu -24 288 1 418 296 48 53 chr18 32187595 32187784 -53801150 - MIR SINE MIR -1 261 74 2366 85 0 0 chr18 32188034 32188327 -53800607 - AluY SINE Alu -17 294 2 336 263 0 40 chr18 32188588 32188687 -53800247 - MIR SINE MIR -113 149 55 2166 106 13 3 chr18 32189651 32189953 -53798981 + AluSp SINE Alu 1 305 -8 1680 167 58 4 chr18 32190331 32190606 -53798328 - AluJb SINE Alu -22 290 1 229 353 126 0 chr18 32192316 32192435 -53796499 + L2 LINE L2 3103 3236 -36 259 309 0 15 chr18 32192573 32192641 -53796293 + L2 LINE L2 2570 2636 -678 2165 110 0 0 chr18 32192711 32192992 -53795942 + AluSx SINE Alu 1 281 -31 294 95 0 0 chr18 32192995 32193037 -53795897 + (CA)n Simple_repeat Simple_repeat 2 43 0 497 235 106 60 chr18 32193171 32193388 -53795546 + MIR SINE MIR 1 227 -35 35 0 0 0 chr18 32193764 32193799 -53795135 + AT_rich Low_complexity Low_complexity 1 35 0 1536 153 0 99 chr18 32193800 32194133 -53794801 - AluJb SINE Alu -2 300 1 2124 106 6 16 chr18 32194140 32194452 -53794482 - AluSq SINE Alu -4 309 1 277 231 38 131 chr18 32194500 32194660 -53794274 - LTR33 LTR ERVL -8 513 369 235 257 218 60 chr18 32195447 32195503 -53793431 - L1ME3A LINE L1 -844 5302 5256 2210 98 7 0 chr18 32195503 32195789 -53793145 + AluSx SINE Alu 1 288 -24 2326 79 0 3 chr18 32195799 32196112 -53792822 + AluSg SINE Alu 2 313 0 235 257 218 60 chr18 32196112 32196424 -53792510 - L1ME3A LINE L1 -897 5249 4862 677 183 0 35 chr18 32196510 32196652 -53792282 - AluJo SINE Alu -175 137 1 1927 125 3 11 chr18 32196660 32196976 -53791958 - AluSx SINE Alu 0 314 1 265 259 103 75 chr18 32197133 32197453 -53791481 - L1ME3A LINE L1 -1820 4326 3998 194 289 155 10 chr18 32197522 32197619 -53791315 - MER5B DNA MER1_type -22 156 46 21 0 0 0 chr18 32197796 32197817 -53791117 + AT_rich Low_complexity Low_complexity 1 21 0 250 235 82 0 chr18 32198029 32198114 -53790820 - Charlie7 DNA MER1_type -12 2600 2509 1895 122 37 3 chr18 32198114 32198410 -53790524 + AluSx SINE Alu 1 306 -6 446 318 84 102 chr18 32198410 32198466 -53790468 - Charlie7 DNA MER1_type -425 2187 2132 2222 108 3 0 chr18 32198466 32198762 -53790172 + AluSp SINE Alu 1 297 -16 446 318 84 102 chr18 32198762 32199462 -53789472 - Charlie7 DNA MER1_type -480 2132 1444 2216 101 0 0 chr18 32199462 32199749 -53789185 + AluSx SINE Alu 1 287 -25 513 311 16 11 chr18 32199816 32199999 -53788935 - Charlie7 DNA MER1_type -2362 250 67 21 57 0 0 chr18 32200216 32200251 -53788683 + AT_rich Low_complexity Low_complexity 1 35 0 2380 90 0 0 chr18 32200573 32200873 -53788061 - AluSq SINE Alu -13 300 1 23 33 0 0 chr18 32200873 32200903 -53788031 + AT_rich Low_complexity Low_complexity 1 30 0 527 137 30 114 chr18 32201358 32201489 -53787445 + MER119 DNA MER1_type 464 583 0 900 106 8 15 chr18 32202571 32202703 -53786231 + FLAM_C SINE Alu 1 131 -2 765 139 15 44 chr18 32203032 32203169 -53785765 + FLAM_C SINE Alu 1 133 0 2300 89 0 0 chr18 32204718 32205010 -53783924 + AluY SINE Alu 1 292 -19 21 0 0 0 chr18 32205090 32205111 -53783823 + AT_rich Low_complexity Low_complexity 1 21 0 1991 147 0 0 chr18 32205177 32205463 -53783471 + AluSx SINE Alu 3 288 -24 598 227 8 0 chr18 32205589 32205717 -53783217 - FLAM_A SINE Alu 0 142 14 231 283 0 0 chr18 32206991 32207044 -53781890 + (TATG)n Simple_repeat Simple_repeat 3 55 0 1270 171 14 0 chr18 32209317 32209527 -53779407 + AluJb SINE Alu 85 300 -12 1868 75 132 4 chr18 32209527 32209792 -53779142 - AluSq SINE Alu -14 299 1 232 296 92 35 chr18 32209997 32210139 -53778795 - L1ME3A LINE L1 -76 6094 5945 1920 142 10 0 chr18 32210483 32210771 -53778163 - AluSx SINE Alu -21 291 1 2032 99 18 0 chr18 32210794 32211067 -53777867 - AluSx SINE Alu -30 282 5 271 161 65 0 chr18 32211395 32211457 -53777477 + MIR SINE MIR 160 225 -37 611 135 0 0 chr18 32211623 32211712 -53777222 - AluJb SINE Alu -181 131 43 314 203 145 0 chr18 32211735 32211804 -53777130 - FRAM/FAM SINE Alu -88 78 1 480 66 40 0 chr18 32211909 32211985 -53776949 + AluSp/q SINE Alu 235 313 0 808 182 47 57 chr18 32212371 32212451 -53776483 - Charlie1 DNA MER1_type -6 2755 2676 2036 155 14 34 chr18 32212451 32212805 -53776129 + MER7A DNA MER2_type 2 346 0 808 182 47 57 chr18 32212805 32212845 -53776089 - Charlie1 DNA MER1_type -85 2676 2637 714 179 8 15 chr18 32212845 32212979 -53775955 + FLAM_C SINE Alu 1 133 0 808 182 47 57 chr18 32212979 32213250 -53775684 - Charlie1 DNA MER1_type -124 2637 2325 1745 157 0 39 chr18 32213275 32213580 -53775354 + AluJb SINE Alu 11 303 -9 379 175 49 70 chr18 32214135 32214278 -53774656 - Charlie5 DNA MER1_type -117 2495 2356 6546 61 19 5 chr18 32214279 32215136 -53773798 + L1PA7 LINE L1 5285 6153 -1 246 318 47 9 chr18 32215136 32215243 -53773691 - L1MC4a LINE L1 -1624 6184 6074 1785 187 53 2 chr18 32215511 32215923 -53773011 + L1M2 LINE L1 2456 2888 -3961 3809 188 49 0 chr18 32215951 32216609 -53772325 + L1PA15-16 LINE L1 2 691 -6158 1762 203 28 131 chr18 32216855 32217127 -53771807 + MER77 LTR ERV1 1 191 -414 2453 108 63 31 chr18 32217127 32217542 -53771392 + MSTA LTR MaLR 1 428 0 1762 203 28 131 chr18 32217542 32217810 -53771124 + MER77 LTR ERV1 191 485 -120 2265 165 44 2 chr18 32218781 32219212 -53769722 + L1PA16 LINE L1 5710 6158 -8 322 301 117 0 chr18 32219696 32219799 -53769135 + MER5B DNA MER1_type 2 116 -62 1533 217 70 27 chr18 32219799 32220241 -53768693 - MLT1C LTR MaLR 0 467 7 230 271 229 17 chr18 32220323 32220441 -53768493 - MER5A DNA MER1_type 0 189 47 546 260 60 52 chr18 32220571 32220840 -53768094 + L1MC4 LINE L1 7300 7570 -472 315 118 20 0 chr18 32220866 32220917 -53768017 + L1P LINE L1 4730 4781 -1365 313 217 0 0 chr18 32221050 32221119 -53767815 + L1M2 LINE L1 4791 4859 -1287 2032 164 74 1 chr18 32221178 32221695 -53767239 + L1P LINE L1 4854 5424 -741 617 247 7 7 chr18 32221795 32221985 -53766949 + L1MC/D LINE L1 5291 5480 -836 1727 161 20 32 chr18 32222464 32222812 -53766122 - L1MA6 LINE L1 0 6300 5957 301 154 0 0 chr18 32222812 32222864 -53766070 - L1MA6 LINE L1 -629 5671 5620 2265 139 46 31 chr18 32222881 32223585 -53765349 + L1M2 LINE L1 4953 5662 -638 1870 171 3 0 chr18 32223982 32224280 -53764654 - AluJo SINE Alu -12 300 2 331 270 54 0 chr18 32224402 32224476 -53764458 + L2 LINE L2 3193 3270 -2 180 0 0 0 chr18 32225559 32225579 -53763355 + (T)n Simple_repeat Simple_repeat 1 20 0 325 218 23 105 chr18 32226317 32226450 -53762484 - MLT1J LTR MaLR -3 508 387 242 277 92 21 chr18 32226535 32226676 -53762258 - L1ME LINE L1 -205 5916 5766 416 287 115 29 chr18 32226718 32226962 -53761972 - L1ME LINE L1 -427 5694 5430 22 0 0 0 chr18 32227521 32227543 -53761391 + AT_rich Low_complexity Low_complexity 1 22 0 517 101 18 101 chr18 32227822 32227931 -53761003 + L1PA7 LINE L1 6048 6147 -7 306 0 0 0 chr18 32228434 32228468 -53760466 + (CA)n Simple_repeat Simple_repeat 2 35 0 189 0 0 0 chr18 32228467 32228488 -53760446 + (TC)n Simple_repeat Simple_repeat 1 21 0 * 377 315 71 46 chr18 32229156 32229483 -53759451 - L1ME LINE L1 -527 5594 5260 578 221 98 0 chr18 32231273 32231436 -53757498 + MER104 DNA MER2_type 2 180 0 396 235 25 0 chr18 32231714 32231795 -53757139 + L2 LINE L2 3142 3224 -48 1068 259 57 34 chr18 32231905 32232343 -53756591 + MLT1C LTR MaLR 1 449 -18 2062 123 38 41 chr18 32232343 32232708 -53756226 + THE1B LTR MaLR 1 364 0 214 250 0 0 chr18 32232733 32232781 -53756153 + (CA)n Simple_repeat Simple_repeat 2 49 0 201 370 60 52 chr18 32232956 32233305 -53755629 - L2 LINE L2 -4 3268 2917 214 367 102 25 chr18 32233906 32234268 -53754666 - L2 LINE L2 -557 2757 2368 554 261 53 61 chr18 32234449 32234523 -53754411 - MLT1I LTR MaLR -118 291 218 1511 182 11 14 chr18 32234523 32234803 -53754131 - AluJb SINE Alu -9 303 25 554 261 53 61 chr18 32234803 32234973 -53753961 - MLT1I LTR MaLR -191 218 49 1465 141 123 34 chr18 32236021 32236290 -53752644 - AluJb SINE Alu -19 293 1 311 294 78 8 chr18 32236452 32236633 -53752301 - MIR SINE MIR 0 262 17 228 196 0 20 chr18 32237006 32237057 -53751877 + (TA)n Simple_repeat Simple_repeat 1 50 0 239 240 0 0 chr18 32239224 32239274 -53749660 - MER94 DNA DNA -76 58 9 231 217 100 0 chr18 32239289 32239349 -53749585 + MIR SINE MIR 135 200 -62 270 0 0 0 chr18 32239441 32239471 -53749463 + (CA)n Simple_repeat Simple_repeat 2 31 0 195 337 12 12 chr18 32240710 32240793 -53748141 - L2 LINE L2 -214 3058 2976 4567 182 35 3 chr18 32241401 32242567 -53746367 - L1MB7 LINE L1 -9 6175 4975 22 0 0 0 chr18 32243573 32243595 -53745339 + AT_rich Low_complexity Low_complexity 1 22 0 393 263 68 17 chr18 32244248 32244366 -53744568 - MIR SINE MIR -3 259 136 1414 176 121 23 chr18 32244622 32245019 -53743915 - HsTC2 DNA Tc2 0 1900 1289 242 300 17 0 chr18 32245027 32245087 -53743847 - HsTC2 DNA Tc2 -1758 140 80 560 280 45 6 chr18 32245402 32245559 -53743375 + MIR SINE MIR 79 241 -21 238 286 88 33 chr18 32246919 32247010 -53741924 - MIR SINE MIR -78 184 89 281 293 213 17 chr18 32248669 32248843 -53740091 - MIR SINE MIR -16 246 39 344 288 237 10 chr18 32249681 32249879 -53739055 + MIR SINE MIR 2 244 -18 3659 211 84 63 chr18 32250242 32251553 -53737381 - L1MC4a LINE L1 0 7808 6471 * 5350 233 47 47 chr18 32251548 32253447 -53735487 - L1MB7 LINE L1 -1281 4865 2967 2274 224 56 41 chr18 32253464 32254044 -53734890 - L1MDa LINE L1 -4369 2171 1576 2227 110 0 0 chr18 32254044 32254345 -53734589 - AluSg SINE Alu -9 301 1 2274 224 56 41 chr18 32254345 32254538 -53734396 - L1MDa LINE L1 -4964 1576 1387 801 219 76 25 chr18 32255207 32255445 -53733489 - L1MC4a LINE L1 -1340 6468 6219 2553 125 49 2 chr18 32256975 32257384 -53731550 - MSTA LTR MaLR 0 428 1 432 264 14 29 chr18 32258234 32258374 -53730560 + MIR SINE MIR 27 164 -98 2159 119 0 3 chr18 32259370 32259682 -53729252 + AluY SINE Alu 1 311 0 559 321 75 23 chr18 32259685 32259950 -53728984 + L3b LINE CR1 1116 1394 -189 25 0 0 0 chr18 32260978 32261003 -53727931 + AT_rich Low_complexity Low_complexity 1 25 0 1636 187 0 7 chr18 32261559 32261837 -53727097 - AluJo SINE Alu -36 276 1 208 283 75 0 chr18 32261937 32261990 -53726944 + L3 LINE CR1 1513 1569 -8 279 270 191 0 chr18 32262418 32262533 -53726401 - MIR SINE MIR -70 192 56 261 293 197 27 chr18 32262730 32262877 -53726057 + MIR3 SINE MIR 31 202 -6 2356 53 0 3 chr18 32263398 32263701 -53725233 + L1PA4 LINE L1 5854 6155 0 199 352 0 0 chr18 32264150 32264221 -53724713 - L2 LINE L2 -534 2780 2710 587 220 69 44 chr18 32264387 32264546 -53724388 - MIR SINE MIR -5 257 95 766 169 7 7 chr18 32264918 32265054 -53723880 - FLAM_C SINE Alu -2 141 6 285 165 17 50 chr18 32265912 32266037 -53722897 + MLT1E3 LTR MaLR 1 191 -463 1377 203 78 15 chr18 32266042 32266377 -53722557 - MLT1A1 LTR MaLR 0 365 10 1229 195 146 99 chr18 32266391 32266817 -53722117 + MLT1E3 LTR MaLR 155 653 -1 13525 146 18 8 chr18 32267667 32270259 -53718675 - L1MA2 LINE L1 0 6304 3661 243 0 0 0 chr18 32270259 32270286 -53718648 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 13525 146 18 8 chr18 32270286 32271228 -53717706 - L1MA2 LINE L1 -2643 3661 2730 287 375 0 0 chr18 32273117 32273285 -53715649 + (TGG)n Simple_repeat Simple_repeat 1 168 0 2221 123 0 0 chr18 32274588 32274889 -53714045 + AluSx SINE Alu 3 303 -9 381 324 81 0 chr18 32274899 32275072 -53713862 - MIR SINE MIR -13 249 63 1484 151 16 12 chr18 32275075 32275326 -53713608 + AluJo SINE Alu 37 288 -24 22 0 0 0 chr18 32277781 32277803 -53711131 + AT_rich Low_complexity Low_complexity 1 22 0 408 274 30 49 chr18 32277895 32278059 -53710875 - MLT1J LTR MaLR -145 366 206 688 211 0 7 chr18 32278073 32278225 -53710709 + L1M4 LINE L1 4102 4252 -1894 659 109 0 0 chr18 32278225 32278326 -53710608 - AluSp/q SINE Alu 0 313 213 975 109 7 0 chr18 32279360 32279497 -53709437 + FLAM_C SINE Alu 1 138 -5 926 274 67 44 chr18 32279719 32280153 -53708781 - MLT1J1 LTR MaLR 0 446 3 2226 114 3 0 chr18 32280191 32280499 -53708435 + AluSx SINE Alu 1 309 -3 932 201 0 0 chr18 32281949 32282113 -53706821 + AluJb SINE Alu 137 300 -12 2069 131 34 0 chr18 32282481 32282779 -53706155 + AluSx SINE Alu 1 308 -4 209 279 244 0 chr18 32282805 32282891 -53706043 + L2 LINE L2 3162 3268 -4 194 346 103 0 chr18 32284114 32284221 -53704713 + L2 LINE L2 2639 2756 -558 36268 47 2 3 chr18 32284471 32290090 -53698844 - L1PA5 LINE L1 -4 6150 540 269 200 74 53 chr18 32290354 32290449 -53698485 + L2 LINE L2 3180 3276 -37 322 219 146 44 chr18 32290535 32290672 -53698262 + MIR SINE MIR 1 151 -111 195 308 140 41 chr18 32290753 32290974 -53697960 - MIR SINE MIR -19 243 1 1925 155 30 7 chr18 32291309 32291613 -53697321 - AluJb SINE Alu -1 311 1 529 330 54 8 chr18 32292183 32292422 -53696512 + MIR SINE MIR 12 261 -1 22 0 0 0 chr18 32292537 32292559 -53696375 + AT_rich Low_complexity Low_complexity 1 22 0 253 239 14 14 chr18 32293412 32293483 -53695451 - L2 LINE L2 -7 3306 3236 241 246 101 14 chr18 32293741 32293810 -53695124 + L2 LINE L2 3239 3313 0 186 367 11 44 chr18 32294466 32294556 -53694378 + L2 LINE L2 2869 2955 -358 714 201 69 0 chr18 32294797 32294956 -53693978 - MER5B DNA MER1_type -4 174 5 24 0 0 0 chr18 32295490 32295514 -53693420 + AT_rich Low_complexity Low_complexity 1 24 0 1559 201 20 13 chr18 32295549 32295848 -53693086 - AluJo SINE Alu -11 301 1 769 311 59 0 chr18 32296161 32296399 -53692535 + MIR SINE MIR 4 255 -7 2297 233 94 37 chr18 32296717 32297674 -53691260 - L1MC4 LINE L1 -142 7900 6889 228 375 39 0 chr18 32297722 32297826 -53691108 - MER91C DNA MER1_type -30 110 3 23 33 0 0 chr18 32298694 32298724 -53690210 + AT_rich Low_complexity Low_complexity 1 30 0 243 277 109 36 chr18 32298759 32298896 -53690038 + MIR SINE MIR 90 236 -26 702 291 62 17 chr18 32299764 32300005 -53688929 - MIR SINE MIR 0 262 11 31 0 0 0 chr18 32300526 32300557 -53688377 + AT_rich Low_complexity Low_complexity 1 31 0 255 176 42 63 chr18 32300991 32301133 -53687801 + L1MC5 LINE L1 7609 7747 -214 21 36 0 0 chr18 32301667 32301695 -53687239 + AT_rich Low_complexity Low_complexity 1 28 0 747 210 19 0 chr18 32304964 32305126 -53683808 + MER20 DNA MER1_type 53 217 -2 2320 112 0 0 chr18 32305241 32305546 -53683388 - AluSx SINE Alu -7 305 1 2110 108 3 42 chr18 32306020 32306327 -53682607 - AluSg SINE Alu -15 295 1 212 307 105 18 chr18 32306615 32306729 -53682205 - MIR SINE MIR -122 140 17 2112 135 7 0 chr18 32307219 32307522 -53681412 - AluSx SINE Alu -7 305 1 414 0 0 0 chr18 32307681 32307727 -53681207 + (CA)n Simple_repeat Simple_repeat 1 46 0 2290 92 0 3 chr18 32307877 32308170 -53680764 + AluSg SINE Alu 1 292 -18 503 269 38 25 chr18 32308619 32308779 -53680155 + MIR SINE MIR 59 220 -42 212 180 0 20 chr18 32308831 32308881 -53680053 + (TTTG)n Simple_repeat Simple_repeat 3 51 0 2336 93 7 0 chr18 32308883 32309183 -53679751 - AluSp SINE Alu -9 304 3 352 305 132 9 chr18 32309194 32309407 -53679527 + L1M4 LINE L1 4130 4368 -1778 21 0 0 0 chr18 32310658 32310679 -53678255 + AT_rich Low_complexity Low_complexity 1 21 0 566 159 0 9 chr18 32312271 32312378 -53676556 - MLT1A1 LTR MaLR -249 116 11 21 36 0 0 chr18 32312589 32312617 -53676317 + AT_rich Low_complexity Low_complexity 1 28 0 404 307 45 42 chr18 32313746 32314010 -53674924 + L2 LINE L2 1819 2083 -1231 191 316 97 61 chr18 32314583 32314811 -53674123 + L2 LINE L2 2996 3231 -41 2179 94 28 0 chr18 32315302 32315590 -53673344 - AluSc SINE Alu -13 296 1 213 277 15 0 chr18 32319318 32319383 -53669551 - L2 LINE L2 0 3313 3248 192 310 84 0 chr18 32320676 32320747 -53668187 + MIR SINE MIR 15 91 -171 273 29 0 0 chr18 32320836 32320870 -53668064 + (TG)n Simple_repeat Simple_repeat 1 34 0 400 128 0 58 chr18 32321107 32321193 -53667741 - L1PA8 LINE L1 -2 6170 6090 223 322 0 0 chr18 32321283 32321342 -53667592 + (TG)n Simple_repeat Simple_repeat 2 60 0 332 246 127 0 chr18 32321376 32321406 -53667528 + L1MC4 LINE L1 6582 6607 -1435 2333 108 0 0 chr18 32321406 32321712 -53667222 + AluSx SINE Alu 1 306 -6 332 246 127 0 chr18 32321712 32321791 -53667143 + L1MC4 LINE L1 6607 6705 -1337 217 245 0 0 chr18 32321791 32321840 -53667094 + (TATATG)n Simple_repeat Simple_repeat 3 51 0 715 271 98 52 chr18 32325117 32325729 -53663205 + HAL1 LINE L1 620 1259 -1248 282 73 0 0 chr18 32325768 32325809 -53663125 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1245 185 58 21 chr18 32325815 32326058 -53662876 - AluJo SINE Alu -30 282 31 636 249 155 55 chr18 32326077 32326618 -53662316 + HAL1 LINE L1 1912 2506 -1 689 175 0 29 chr18 32326767 32326904 -53662030 + MER45A DNA AcHobo 46 178 0 295 276 41 31 chr18 32328205 32328303 -53660631 - L2 LINE L2 -38 3234 3136 910 148 0 0 chr18 32328412 32328547 -53660387 - AluJo SINE Alu -177 135 1 536 309 68 18 chr18 32328944 32329164 -53659770 + MIR SINE MIR 28 258 -4 203 317 166 14 chr18 32330980 32331125 -53657809 + MIR3 SINE MIR 32 198 -10 247 207 103 0 chr18 32331345 32331403 -53657531 - L2 LINE L2 0 3313 3250 181 81 27 27 chr18 32331862 32331899 -53657035 + (TTCCC)n Simple_repeat Simple_repeat 3 39 0 262 284 15 0 chr18 32332438 32332505 -53656429 + L2 LINE L2 3237 3304 -9 24 32 0 0 chr18 32336110 32336141 -53652793 + AT_rich Low_complexity Low_complexity 1 31 0 26 50 0 0 chr18 32336898 32336938 -53651996 + AT_rich Low_complexity Low_complexity 1 40 0 2140 123 3 13 chr18 32336990 32337300 -53651634 - AluSx SINE Alu -5 307 1 691 188 15 0 chr18 32338390 32338523 -53650411 - FLAM_C SINE Alu -8 135 1 23 54 0 0 chr18 32339404 32339441 -53649493 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr18 32339578 32339606 -53649328 + AT_rich Low_complexity Low_complexity 1 28 0 1755 115 0 8 chr18 32340654 32340907 -53648027 - AluSg SINE Alu -3 307 57 548 104 0 0 chr18 32341008 32341085 -53647849 - AluSg SINE Alu -232 77 1 1974 135 49 0 chr18 32342263 32342551 -53646383 + AluSx SINE Alu 1 302 -10 530 280 91 16 chr18 32343603 32343789 -53645145 + MIR SINE MIR 63 262 0 375 340 74 55 chr18 32343799 32344232 -53644702 + L2 LINE L2 2318 2758 -556 5039 66 0 5 chr18 32344241 32344881 -53644053 + L1PA5 LINE L1 5513 6149 -5 213 280 80 20 chr18 32345009 32345109 -53643825 + MIR SINE MIR 12 117 -145 333 283 57 128 chr18 32345383 32345680 -53643254 + L2 LINE L2 2948 3223 -49 223 362 79 18 chr18 32345984 32346263 -53642671 - L2 LINE L2 -766 2548 2253 1546 170 66 88 chr18 32346675 32347098 -53641836 - MLT2D LTR ERVL 0 414 1 205 299 126 8 chr18 32347400 32347527 -53641407 - MIR3 SINE MIR -65 143 2 240 252 58 58 chr18 32348880 32348983 -53639951 - MIR SINE MIR -2 260 158 327 305 38 42 chr18 32349353 32349414 -53639520 - MIR SINE MIR -13 249 189 2562 56 0 0 chr18 32349414 32349716 -53639218 - AluY SINE Alu -9 302 1 327 305 38 42 chr18 32349716 32349887 -53639047 - MIR SINE MIR -73 189 18 297 258 0 0 chr18 32350555 32350621 -53638313 + MIR3 SINE MIR 139 204 -4 202 172 0 35 chr18 32352602 32352660 -53636274 + C-rich Low_complexity Low_complexity 6 61 0 186 327 138 25 chr18 32354148 32354307 -53634627 - MER5B DNA MER1_type 0 178 2 3221 123 12 12 chr18 32355334 32355847 -53633087 - L1PA16 LINE L1 -2 6164 5652 341 277 82 58 chr18 32355959 32356137 -53632797 - L1ME LINE L1 -510 5660 5488 2359 97 7 0 chr18 32356137 32356437 -53632497 - AluSg SINE Alu -8 302 1 341 277 82 58 chr18 32356437 32356471 -53632463 - L1ME LINE L1 -682 5488 5456 1656 192 0 17 chr18 32356471 32356773 -53632161 - AluJo SINE Alu -14 298 2 341 277 82 58 chr18 32356773 32356888 -53632046 - L1ME LINE L1 -714 5456 5324 257 258 0 0 chr18 32357108 32357170 -53631764 - L1P LINE L1 -1173 4973 4912 548 263 110 47 chr18 32357866 32358102 -53630832 - MIR SINE MIR 0 262 12 322 318 103 31 chr18 32359933 32360128 -53628806 - MIR SINE MIR -11 251 43 2947 122 36 22 chr18 32360309 32360623 -53628311 - L1MC1 LINE L1 0 6333 6008 2155 85 0 21 chr18 32360623 32360904 -53628030 + AluSg SINE Alu 18 292 -18 2947 122 36 22 chr18 32360904 32361090 -53627844 - L1MC1 LINE L1 -325 6008 5826 210 367 0 10 chr18 32361881 32361979 -53626955 + CT-rich Low_complexity Low_complexity 5 101 0 1727 157 61 0 chr18 32362139 32362419 -53626515 - AluSx SINE Alu -15 297 1 306 340 38 25 chr18 32363139 32363298 -53625636 - L2 LINE L2 -1 3312 3152 217 317 165 57 chr18 32364019 32364559 -53624375 - L2 LINE L2 -653 2661 2064 854 305 65 12 chr18 32365621 32366050 -53622884 + L1MC4a LINE L1 5402 5853 -1955 333 220 76 42 chr18 32366765 32366883 -53622051 - L2 LINE L2 -1 3312 3191 2023 127 38 0 chr18 32368450 32368741 -53620193 - AluSx SINE Alu -10 302 1 682 196 95 24 chr18 32368827 32368995 -53619939 + MER58A DNA MER1_type 45 224 0 1679 179 28 10 chr18 32369116 32369406 -53619528 + AluJb SINE Alu 1 295 -17 670 176 6 43 chr18 32370167 32370351 -53618583 + MER33 DNA MER1_type 1 163 -88 283 156 11 11 chr18 32370364 32370454 -53618480 + (TA)n Simple_repeat Simple_repeat 1 90 0 461 167 125 0 chr18 32370481 32370601 -53618333 + MER33 DNA MER1_type 189 323 -1 2430 88 0 0 chr18 32370977 32371284 -53617650 + AluSg SINE Alu 1 307 -3 490 258 114 6 chr18 32371353 32371520 -53617414 - MIR SINE MIR -41 221 37 21 36 0 0 chr18 32371755 32371783 -53617151 + AT_rich Low_complexity Low_complexity 1 28 0 4025 277 209 34 chr18 32371887 32374534 -53614400 + L2 LINE L2 205 3312 -1 25 31 0 0 chr18 32375086 32375118 -53613816 + AT_rich Low_complexity Low_complexity 1 32 0 2365 93 0 3 chr18 32376224 32376534 -53612400 - AluY SINE Alu -2 309 1 2206 107 3 7 chr18 32378048 32378347 -53610587 + AluSx SINE Alu 1 298 -14 506 235 54 27 chr18 32378988 32379137 -53609797 - L2 LINE L2 0 3313 3161 456 307 15 0 chr18 32379145 32379282 -53609652 - L2 LINE L2 -995 2319 2181 1136 172 19 5 chr18 32379287 32379496 -53609438 + MER20 DNA MER1_type 1 212 -7 961 220 137 12 chr18 32379514 32379769 -53609165 - L2 LINE L2 -1148 2166 1880 600 299 160 56 chr18 32379772 32380052 -53608882 - L2 LINE L2 -1996 1318 1068 2235 130 0 0 chr18 32380052 32380359 -53608575 + AluSx SINE Alu 1 307 -5 600 299 160 56 chr18 32380359 32380617 -53608317 - L2 LINE L2 -2246 1068 724 444 296 95 11 chr18 32381056 32381245 -53607689 + MIR SINE MIR 24 228 -34 914 211 16 0 chr18 32381253 32381438 -53607496 + MER58A DNA MER1_type 37 224 0 2374 106 0 0 chr18 32381535 32381847 -53607087 - AluSx SINE Alu 0 312 1 226 221 0 26 chr18 32381865 32381942 -53606992 + CT-rich Low_complexity Low_complexity 1 75 0 1839 167 14 10 chr18 32381942 32382236 -53606698 - AluJo SINE Alu -17 295 1 426 158 0 0 chr18 32383028 32383104 -53605830 - L1MA7 LINE L1 -45 6246 6171 1551 145 15 4 chr18 32383106 32383375 -53605559 - L1MA7 LINE L1 -240 6051 5780 441 307 30 55 chr18 32383537 32383739 -53605195 - MIR3 SINE MIR -6 202 6 2620 143 65 5 chr18 32384033 32384480 -53604454 - MER101 LTR ERV1 0 474 1 2422 88 3 0 chr18 32384939 32385247 -53603687 - AluSp SINE Alu -4 309 1 22 56 0 0 chr18 32385953 32385989 -53602945 + AT_rich Low_complexity Low_complexity 1 36 0 2499 66 0 0 chr18 32386335 32386639 -53602295 - AluY SINE Alu -7 304 1 24 0 0 0 chr18 32386910 32386934 -53602000 + AT_rich Low_complexity Low_complexity 1 24 0 432 259 175 42 chr18 32388433 32388622 -53600312 - MIR SINE MIR -12 250 37 1121 235 5 0 chr18 32388684 32388901 -53600033 - MER58A DNA MER1_type -6 218 1 782 134 0 39 chr18 32389052 32389179 -53599755 + FLAM_A SINE Alu 21 142 0 1557 180 107 9 chr18 32389284 32389611 -53599323 + L1MD3 LINE L1 7627 7985 -10 2288 110 0 0 chr18 32389613 32389914 -53599020 + AluSg SINE Alu 3 303 -7 314 293 96 32 chr18 32390406 32390594 -53598340 + L1M4 LINE L1 3646 3845 -2301 1013 132 7 0 chr18 32390644 32390824 -53598110 + AluSg/x SINE Alu 135 310 0 331 301 103 39 chr18 32390824 32391027 -53597907 + L1M4 LINE L1 3889 4104 -2042 3159 249 71 43 chr18 32391429 32392672 -53596262 - L1MC4 LINE L1 -1 8041 6765 336 103 0 0 chr18 32392694 32392752 -53596182 + (TG)n Simple_repeat Simple_repeat 2 59 0 3564 249 85 39 chr18 32392760 32393045 -53595889 - L1MC4a LINE L1 -1212 6596 6326 2056 137 77 8 chr18 32393045 32393396 -53595538 - THE1C LTR MaLR 0 375 1 3564 249 85 39 chr18 32393396 32393514 -53595420 - L1MC4a LINE L1 -1482 6326 6215 7079 55 19 5 chr18 32393514 32394370 -53594564 + L1PA7 LINE L1 5287 6154 0 3564 249 85 39 chr18 32394370 32395204 -53593730 - L1MC4a LINE L1 -1593 6215 5295 1492 111 13 13 chr18 32395204 32395429 -53593505 - AluSc SINE Alu -6 303 79 3564 249 85 39 chr18 32395429 32395473 -53593461 - L1MC4a LINE L1 -2513 5295 5254 31 58 0 0 chr18 32395734 32395786 -53593148 + AT_rich Low_complexity Low_complexity 1 52 0 1117 189 53 5 chr18 32396005 32396211 -53592723 - MER20 DNA MER1_type 0 219 4 23 0 0 0 chr18 32396443 32396466 -53592468 + AT_rich Low_complexity Low_complexity 1 23 0 866 174 35 0 chr18 32396624 32396768 -53592166 + AluJb SINE Alu 133 281 -31 224 0 65 0 chr18 32396771 32396802 -53592132 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 406 229 151 50 chr18 32396803 32396982 -53591952 + L1ME LINE L1 5605 5801 -320 54 16 0 0 chr18 32397276 32397337 -53591597 + AT_rich Low_complexity Low_complexity 1 61 0 980 314 64 8 chr18 32399004 32399392 -53589542 - L2 LINE L2 -529 2785 2376 342 0 0 0 chr18 32399512 32399550 -53589384 + (CA)n Simple_repeat Simple_repeat 2 39 0 180 345 46 35 chr18 32400040 32400127 -53588807 - L2 LINE L2 -48 3224 3137 219 340 30 84 chr18 32400198 32400460 -53588474 - L2 LINE L2 -180 3092 2845 2545 47 7 0 chr18 32400823 32401119 -53587815 + AluY SINE Alu 1 298 -13 21 36 0 0 chr18 32401620 32401648 -53587286 + AT_rich Low_complexity Low_complexity 1 28 0 2252 98 3 19 chr18 32402294 32402609 -53586325 - AluSx SINE Alu -2 310 1 884 190 0 52 chr18 32403163 32403337 -53585597 + FRAM SINE Alu 1 165 -1 2004 87 0 58 chr18 32403435 32403660 -53585274 - AluSc SINE Alu -18 291 87 3404 62 27 7 chr18 32403660 32404099 -53584835 - LTR7 LTR ERV1 -2 448 1 2004 87 0 58 chr18 32404099 32404182 -53584752 - AluSc SINE Alu -222 87 1 253 256 156 0 chr18 32404679 32404769 -53584165 + MIR SINE MIR 51 154 -108 3676 102 0 59 chr18 32406092 32406648 -53582286 - MER1A DNA MER1_type -3 526 4 238 239 292 0 chr18 32409371 32409501 -53579433 + L2 LINE L2 3132 3299 -14 2403 62 14 0 chr18 32409902 32410190 -53578744 + AluSp SINE Alu 1 292 -21 300 53 0 0 chr18 32412124 32412162 -53576772 + (TC)n Simple_repeat Simple_repeat 1 38 0 1830 112 4 0 chr18 32412998 32413249 -53575685 + AluSq SINE Alu 45 296 -17 571 250 144 6 chr18 32414232 32414392 -53574542 + MER5A DNA MER1_type 7 188 -1 1909 139 20 7 chr18 32414393 32414694 -53574240 + AluSg SINE Alu 2 306 -4 1541 157 142 22 chr18 32414709 32414977 -53573957 + AluSg SINE Alu 1 300 0 1126 309 73 12 chr18 32416024 32416506 -53572428 - L3 LINE CR1 -10 1567 1057 283 372 0 19 chr18 32416699 32416855 -53572079 - MER117 DNA MER1_type 0 197 45 21 36 0 0 chr18 32418349 32418377 -53570557 + AT_rich Low_complexity Low_complexity 1 28 0 244 191 43 0 chr18 32420331 32420378 -53568556 - L2 LINE L2 -68 3204 3156 180 0 0 0 chr18 32422619 32422639 -53566295 + (A)n Simple_repeat Simple_repeat 1 20 0 626 103 62 0 chr18 32422641 32422738 -53566196 + HY1 scRNA scRNA 3 105 -7 182 300 125 38 chr18 32423526 32423606 -53565328 + L2 LINE L2 3125 3211 -61 380 339 91 6 chr18 32424114 32424279 -53564655 - MIR3 SINE MIR -10 198 20 1327 146 0 25 chr18 32424906 32425105 -53563829 + AluSq SINE Alu 1 194 -119 271 62 0 42 chr18 32425228 32425276 -53563658 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 1914 142 0 0 chr18 32425276 32425550 -53563384 - AluJb SINE Alu -38 274 1 239 77 128 0 chr18 32426086 32426125 -53562809 - Alu SINE Alu -264 44 1 1703 155 4 11 chr18 32426132 32426397 -53562537 + AluJb SINE Alu 34 296 -16 1943 97 12 0 chr18 32426484 32426756 -53562178 - AluSc SINE Alu 0 303 29 22 0 0 0 chr18 32427773 32427795 -53561139 + AT_rich Low_complexity Low_complexity 1 22 0 436 298 37 58 chr18 32428775 32428838 -53560096 - MIR SINE MIR -57 205 142 2287 110 3 0 chr18 32428838 32429137 -53559797 - AluSp SINE Alu -13 300 1 436 298 37 58 chr18 32429137 32429264 -53559670 - MIR SINE MIR -120 142 19 946 138 69 11 chr18 32429465 32429639 -53559295 + MER2 DNA MER2_type 28 211 -134 226 382 41 0 chr18 32429944 32430114 -53558820 - L2 LINE L2 -588 2726 2550 1616 191 95 0 chr18 32430379 32430694 -53558240 + MLT1A1 LTR MaLR 19 363 -2 249 284 86 35 chr18 32431155 32431352 -53557582 - MLT1L LTR MaLR -5 610 404 1691 118 0 4 chr18 32431445 32431673 -53557261 - AluSx SINE Alu -66 246 20 371 252 126 13 chr18 32431725 32431876 -53557058 - MLT1J LTR MaLR -341 170 3 22 0 0 0 chr18 32431941 32431963 -53556971 + AT_rich Low_complexity Low_complexity 1 22 0 2128 103 7 3 chr18 32431963 32432255 -53556679 - L1PB1 LINE L1 -1 6150 5858 668 179 8 37 chr18 32432256 32432390 -53556544 + FLAM_C SINE Alu 1 130 -3 1321 97 6 0 chr18 32432420 32432596 -53556338 + THE1A LTR MaLR 179 355 0 5420 84 0 4 chr18 32432596 32433312 -53555622 + THE1A-int LTR MaLR 1 713 -867 2557 69 0 0 chr18 32434928 32435233 -53553701 + AluY SINE Alu 1 305 -6 276 331 112 12 chr18 32436704 32436873 -53552061 - L2 LINE L2 -4 3309 3124 1769 101 89 4 chr18 32437086 32437377 -53551557 + AluSg SINE Alu 1 313 0 247 39 0 78 chr18 32437414 32437465 -53551469 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 3238 202 49 11 chr18 32437465 32438667 -53550267 + L1PA10 LINE L1 4769 6014 -154 2817 91 10 5 chr18 32438404 32438800 -53550134 + L1PB2 LINE L1 5753 6150 -1 * 397 230 11 0 chr18 32439031 32439118 -53549816 + L2 LINE L2 3226 3313 0 21 36 0 0 chr18 32439594 32439622 -53549312 + AT_rich Low_complexity Low_complexity 1 28 0 2121 120 33 0 chr18 32439704 32440005 -53548929 + AluSx SINE Alu 1 311 -1 2124 131 0 3 chr18 32440224 32440530 -53548404 + AluJb SINE Alu 1 305 -7 210 71 0 0 chr18 32441547 32441575 -53547359 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 337 300 44 0 chr18 32442350 32442440 -53546494 - L2 LINE L2 -23 3249 3156 2724 135 36 14 chr18 32442461 32442905 -53546029 - MLT1C LTR MaLR 0 467 14 2708 154 32 58 chr18 32442905 32443475 -53545459 - MER34B LTR ERV1 0 565 11 1456 122 160 129 chr18 32443935 32444386 -53544548 - MER4C LTR ERV1 0 465 1 362 316 97 35 chr18 32445322 32445664 -53543270 - L1M4 LINE L1 -1631 4515 4153 901 218 18 12 chr18 32445813 32445978 -53542956 + FAM SINE Alu 1 166 -9 32 0 0 23 chr18 32446404 32446425 -53542509 + AT_rich Low_complexity Low_complexity 1 21 -21 2116 97 0 4 chr18 32446425 32446693 -53542241 - AluSq SINE Alu -26 287 21 32 0 0 23 chr18 32446693 32446714 -53542220 + AT_rich Low_complexity Low_complexity 21 42 0 432 305 89 73 chr18 32446790 32447239 -53541695 + MLT1K LTR MaLR 125 580 -8 181 184 53 0 chr18 32447417 32447455 -53541479 + MIR SINE MIR 44 83 -179 849 186 0 7 chr18 32447879 32448019 -53540915 - FLAM_C SINE Alu -3 140 2 1593 197 33 0 chr18 32448044 32448343 -53540591 - AluJo SINE Alu -3 309 1 247 316 35 26 chr18 32449697 32449811 -53539123 + MIR SINE MIR 112 226 -36 1050 141 40 30 chr18 32451753 32451952 -53536982 - THE1C LTR MaLR 0 375 175 12040 34 23 1 chr18 32451952 32457807 -53531127 + L1PA3 LINE L1 13 6155 0 919 105 55 105 chr18 32457818 32458018 -53530916 - THE1C LTR MaLR -185 190 1 1058 243 18 0 chr18 32458195 32458421 -53530513 - MIR SINE MIR -21 241 12 309 254 57 57 chr18 32458482 32458537 -53530397 - MER94 DNA DNA -2 132 78 2166 130 0 0 chr18 32458537 32458838 -53530096 - AluSx SINE Alu -11 301 1 309 254 57 57 chr18 32458838 32458904 -53530030 - MER94 DNA DNA -55 79 11 621 298 97 13 chr18 32458930 32459158 -53529776 - MIR SINE MIR -4 258 12 625 264 19 0 chr18 32459270 32459425 -53529509 + Charlie1a DNA MER1_type 1 158 -1297 1061 167 36 16 chr18 32459434 32459626 -53529308 + L1MC1 LINE L1 5440 5635 -539 4616 240 23 60 chr18 32459626 32459977 -53528957 + L1MD1 LINE L1 3354 3716 -2430 2167 131 0 0 chr18 32459977 32460283 -53528651 + AluSq SINE Alu 1 306 -7 4616 240 23 60 chr18 32460283 32460984 -53527950 + L1MD1 LINE L1 3716 4441 -1705 1830 94 16 75 chr18 32460984 32461291 -53527643 + AluSx SINE Alu 2 290 -22 4616 240 23 60 chr18 32461291 32462297 -53526637 + L1MD1 LINE L1 4441 5309 -837 1049 149 12 0 chr18 32462303 32462471 -53526463 + AluSg/x SINE Alu 134 303 -6 3822 164 113 37 chr18 32462623 32462843 -53526091 + L1MD1 LINE L1 5277 5479 -763 2518 164 43 7 chr18 32462843 32463286 -53525648 + L1MC1 LINE L1 5873 6333 0 3822 164 113 37 chr18 32463286 32463961 -53524973 + L1MD1 LINE L1 5479 6240 -2 3166 178 43 109 chr18 32463961 32464160 -53524774 + Charlie1a DNA MER1_type 556 767 -1994 1694 154 11 7 chr18 32464160 32464433 -53524501 - AluJo SINE Alu -22 290 17 3166 178 43 109 chr18 32464433 32465189 -53523745 + Charlie1a DNA MER1_type 767 1448 -7 264 59 0 0 chr18 32466186 32466220 -53522714 + (TG)n Simple_repeat Simple_repeat 2 35 0 954 250 67 22 chr18 32467170 32467486 -53521448 + LTR16A LTR ERVL 111 440 -10 644 239 23 0 chr18 32469137 32469267 -53519667 - FLAM_C SINE Alu 0 133 1 297 224 14 168 chr18 32469482 32469625 -53519309 - MIR SINE MIR -71 137 17 516 105 0 0 chr18 32470002 32470078 -53518856 + (TA)n Simple_repeat Simple_repeat 2 77 0 2500 61 0 0 chr18 32470182 32470479 -53518455 - AluY SINE Alu -14 297 1 483 318 58 13 chr18 32472036 32472203 -53516731 - MIR SINE MIR -61 147 13 292 190 38 60 chr18 32473852 32474036 -53514898 + (TA)n Simple_repeat Simple_repeat 1 180 0 235 0 28 28 chr18 32474713 32474749 -53514185 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 2076 98 0 17 chr18 32474753 32475040 -53513894 - AluSx SINE Alu -30 282 1 183 205 0 0 chr18 32476249 32476288 -53512646 + GA-rich Low_complexity Low_complexity 2 40 0 2032 162 0 0 chr18 32476509 32476817 -53512117 - AluSx SINE Alu -4 308 1 1438 119 9 57 chr18 32479064 32479112 -53509822 + AluJb SINE Alu 84 133 -179 2209 104 0 0 chr18 32479112 32479414 -53509520 + AluSg SINE Alu 1 302 0 1438 119 9 57 chr18 32479414 32479591 -53509343 + AluJb SINE Alu 133 299 -13 1228 115 73 39 chr18 32479790 32479823 -53509111 + L1MA7 LINE L1 6048 6078 -213 1716 91 0 0 chr18 32479823 32480042 -53508892 + AluSg/x SINE Alu 84 302 -10 1228 115 73 39 chr18 32480042 32480242 -53508692 + L1MA7 LINE L1 6078 6289 -2 335 243 99 53 chr18 32480854 32480973 -53507961 - MER103 DNA DNA -4 162 33 2251 164 33 20 chr18 32480973 32481363 -53507571 + MSTD LTR MaLR 1 395 -1 335 243 99 53 chr18 32481363 32481395 -53507539 - MER103 DNA DNA -133 33 4 2438 164 56 10 chr18 32481992 32482401 -53506533 + MSTA LTR MaLR 1 428 0 392 318 50 22 chr18 32483860 32484039 -53504895 + MIR SINE MIR 1 184 -78 325 289 193 16 chr18 32484265 32484514 -53504420 - L1ME4a LINE L1 -18 6103 5811 306 0 0 0 chr18 32484688 32484722 -53504212 + (TG)n Simple_repeat Simple_repeat 2 35 0 1169 173 264 4 chr18 32486082 32486313 -53502621 + AluSg SINE Alu 3 293 -7 377 108 0 15 chr18 32486313 32486378 -53502556 + (GGAA)n Simple_repeat Simple_repeat 1 64 0 215 273 0 0 chr18 32486723 32486767 -53502167 - L2 LINE L2 -19 3253 3210 * 406 307 121 51 chr18 32486765 32487391 -53501543 + L2 LINE L2 2187 2856 -458 296 208 56 14 chr18 32487478 32487550 -53501384 - MER91A DNA MER1_type 0 196 122 226 209 23 0 chr18 32487796 32487839 -53501095 - MER91A DNA MER1_type -146 44 1 1729 107 27 23 chr18 32488031 32488294 -53500640 + L1PA16 LINE L1 5900 6163 -3 1992 141 0 43 chr18 32488302 32488628 -53500306 + AluSx SINE Alu 1 312 0 21 0 0 0 chr18 32488628 32488649 -53500285 + AT_rich Low_complexity Low_complexity 1 21 0 243 0 0 0 chr18 32490731 32490758 -53498176 + (TG)n Simple_repeat Simple_repeat 2 28 0 1229 292 58 64 chr18 32491131 32492240 -53496694 - L2 LINE L2 -90 3223 2118 207 0 0 0 chr18 32493510 32493533 -53495401 + (ATTG)n Simple_repeat Simple_repeat 2 24 0 196 236 73 0 chr18 32493921 32493976 -53494958 - MIR SINE MIR 0 262 204 183 325 208 0 chr18 32494868 32494988 -53493946 + MIR SINE MIR 42 186 -76 24 32 0 0 chr18 32496259 32496290 -53492644 + AT_rich Low_complexity Low_complexity 1 31 0 2117 139 0 0 chr18 32496733 32497027 -53491907 + AluSx SINE Alu 5 298 -14 5945 148 33 30 chr18 32497673 32497859 -53491075 + L1MA4 LINE L1 4795 4979 -1321 2093 100 0 42 chr18 32497859 32498169 -53490765 + AluSg SINE Alu 1 297 -13 5945 148 33 30 chr18 32498169 32499479 -53489455 + L1MA4 LINE L1 4979 6294 -6 2050 142 3 3 chr18 32499527 32499830 -53489104 + AluSq SINE Alu 3 305 -8 1983 145 112 63 chr18 32500781 32501175 -53487759 - MLT2D LTR ERVL 0 414 2 11740 154 80 25 chr18 32501263 32503270 -53485664 + L1MC2 LINE L1 20 1915 -4511 2457 46 0 0 chr18 32503270 32503590 -53485344 - AluY SINE Alu 0 320 1 11740 154 80 25 chr18 32503590 32503947 -53484987 + L1MC2 LINE L1 1915 2517 -3909 1871 151 3 17 chr18 32503947 32504245 -53484689 - AluJo SINE Alu -18 294 1 11740 154 80 25 chr18 32504245 32504299 -53484635 + L1MC2 LINE L1 2517 2567 -3859 418 255 0 0 chr18 32504298 32504392 -53484542 + L1MC2 LINE L1 4030 4123 -2303 * 5223 167 19 72 chr18 32504391 32504749 -53484185 + L1MC2 LINE L1 5552 5927 -697 243 204 0 0 chr18 32504749 32504793 -53484141 + U5 snRNA snRNA 1 44 -72 5223 167 19 72 chr18 32504793 32505508 -53483426 + L1MC2 LINE L1 5927 6609 -15 3538 183 141 31 chr18 32506024 32506523 -53482411 - Charlie1a DNA MER1_type -1690 1071 628 2250 92 0 0 chr18 32506523 32506837 -53482097 - AluSg SINE Alu 0 314 1 3538 183 141 31 chr18 32506837 32507301 -53481633 - Charlie1a DNA MER1_type -2133 628 1 806 137 8 0 chr18 32507382 32507506 -53481428 - AluJo SINE Alu -174 138 14 329 250 125 0 chr18 32507742 32507846 -53481088 - L2 LINE L2 0 3313 3197 1044 122 0 0 chr18 32508957 32509121 -53479813 + (TGGA)n Simple_repeat Simple_repeat 4 167 0 1765 188 37 90 chr18 32509513 32509645 -53479289 + Charlie4a DNA MER1_type 8 145 -1816 772 192 0 0 chr18 32509645 32509765 -53479169 + 5S rRNA rRNA 2 121 0 309 109 0 0 chr18 32509771 32509826 -53479108 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 1765 188 37 90 chr18 32509826 32510198 -53478736 + Charlie4a DNA MER1_type 150 492 -16 21 36 0 0 chr18 32510532 32510560 -53478374 + AT_rich Low_complexity Low_complexity 1 28 0 953 101 7 29 chr18 32511050 32511189 -53477745 + AluJo SINE Alu 1 136 -176 2105 101 24 7 chr18 32511412 32511585 -53477349 - AluSq SINE Alu -12 301 119 369 0 0 0 chr18 32511585 32511626 -53477308 + (TG)n Simple_repeat Simple_repeat 1 41 0 2105 101 24 7 chr18 32511626 32511748 -53477186 - AluSq SINE Alu -194 119 1 782 237 48 118 chr18 32512204 32512643 -53476291 - LTR37A LTR ERV1 0 426 19 24 0 0 0 chr18 32512839 32512863 -53476071 + AT_rich Low_complexity Low_complexity 1 24 0 2227 119 13 10 chr18 32512994 32513305 -53475629 + AluSx SINE Alu 1 312 0 336 322 75 35 chr18 32513391 32513618 -53475316 + L1M4 LINE L1 4717 4952 -1194 337 338 52 55 chr18 32513681 32513998 -53474936 - L2 LINE L2 -347 2967 2650 2508 130 11 13 chr18 32513998 32514374 -53474560 + THE1C LTR MaLR 1 375 0 337 338 52 55 chr18 32514374 32514399 -53474535 - L2 LINE L2 -664 2650 2626 213 254 0 48 chr18 32514633 32514696 -53474238 + G-rich Low_complexity Low_complexity 5 64 0 710 294 73 22 chr18 32514901 32515176 -53473758 - L2 LINE L2 -2 3311 3023 381 83 0 0 chr18 32515254 32515302 -53473632 + LTR47A LTR ERVL 317 364 -88 194 319 14 14 chr18 32515662 32515734 -53473200 - L2 LINE L2 0 3272 3201 263 28 28 0 chr18 32515739 32515775 -53473159 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 7929 31 0 0 chr18 32515775 32516850 -53472084 - L1PA5 LINE L1 -13 6141 5074 2083 130 3 3 chr18 32516897 32517190 -53471744 + AluSx SINE Alu 1 293 -19 288 281 0 0 chr18 32517539 32517596 -53471338 + L2 LINE L2 3248 3304 -9 236 268 0 0 chr18 32517689 32517745 -53471189 - L2 LINE L2 0 3313 3258 1853 155 24 3 chr18 32517839 32518129 -53470805 + AluSx SINE Alu 1 296 -16 314 282 137 8 chr18 32518254 32518385 -53470549 - L2 LINE L2 -49 3264 3117 1681 246 57 96 chr18 32518395 32518437 -53470497 - MLT2F LTR ERVL -8 655 613 1165 204 19 10 chr18 32518437 32518643 -53470291 - MER63A DNA MER1_type 0 210 3 1681 246 57 96 chr18 32518643 32518804 -53470130 - MLT2F LTR ERVL -50 613 447 2314 82 0 0 chr18 32518804 32519097 -53469837 + AluY SINE Alu 1 293 -18 1681 246 57 96 chr18 32519097 32519571 -53469363 - MLT2F LTR ERVL -216 447 3 4016 264 83 41 chr18 32519576 32520196 -53468738 - L2 LINE L2 -199 3114 2522 2522 64 0 0 chr18 32520196 32520491 -53468443 + AluY SINE Alu 1 295 -16 4016 264 83 41 chr18 32520491 32521559 -53467375 - L2 LINE L2 -791 2522 1355 300 203 130 32 chr18 32521505 32521628 -53467306 + MIR SINE MIR 128 262 0 * 317 285 117 62 chr18 32521719 32522122 -53466812 + L2 LINE L2 2327 2751 -563 1876 164 0 0 chr18 32522307 32522594 -53466340 - AluJb SINE Alu -21 291 5 336 311 19 9 chr18 32522618 32522724 -53466210 + L2 LINE L2 2985 3091 -181 2961 171 23 44 chr18 32522875 32523446 -53465488 - L1MB8 LINE L1 -5 6173 5614 2133 102 54 0 chr18 32523446 32523740 -53465194 + AluY SINE Alu 1 310 -1 2961 171 23 44 chr18 32523740 32523778 -53465156 - L1MB8 LINE L1 -564 5614 5577 658 142 42 33 chr18 32523842 32523962 -53464972 - FLAM_A SINE Alu -12 121 1 26 0 0 0 chr18 32524346 32524372 -53464562 + AT_rich Low_complexity Low_complexity 1 26 0 1489 191 7 48 chr18 32524485 32524809 -53464125 - AluJb SINE Alu 0 312 1 2230 97 7 13 chr18 32525718 32526026 -53462908 + AluSx SINE Alu 1 306 -6 2270 93 0 13 chr18 32526030 32526341 -53462593 + AluSx SINE Alu 1 307 -5 1227 113 11 0 chr18 32526342 32526519 -53462415 + AluSg/x SINE Alu 134 312 0 186 311 0 16 chr18 32526703 32526764 -53462170 - L2 LINE L2 -5 3267 3208 2335 63 3 30 chr18 32526952 32527255 -53461679 + AluSx SINE Alu 1 295 -17 184 344 78 43 chr18 32527968 32528198 -53460736 - L2 LINE L2 -92 3180 2943 1763 180 0 3 chr18 32528299 32528583 -53460351 + AluJo SINE Alu 2 284 -28 304 330 27 9 chr18 32529557 32529669 -53459265 + L2 LINE L2 3141 3254 -18 294 269 42 85 chr18 32529922 32529939 -53458995 + MIR SINE MIR 19 35 -210 2578 56 0 3 chr18 32529939 32530242 -53458692 + AluY SINE Alu 1 302 -9 294 269 42 85 chr18 32530242 32530394 -53458540 + MIR SINE MIR 35 183 -62 2709 119 58 5 chr18 32530475 32530898 -53458036 - MER6 DNA MER2_type 0 865 420 2253 138 39 0 chr18 32530898 32531259 -53457675 - THE1C LTR MaLR 0 375 1 2290 212 0 32 chr18 32531260 32531637 -53457297 - MER6 DNA MER2_type -440 425 62 2111 95 25 0 chr18 32531637 32531920 -53457014 - AluSx SINE Alu -2 310 21 2290 212 0 32 chr18 32531920 32531981 -53456953 - MER6 DNA MER2_type -803 62 1 276 30 0 0 chr18 32532070 32532103 -53456831 + (T)n Simple_repeat Simple_repeat 1 33 0 970 179 0 0 chr18 32532107 32532263 -53456671 - AluJb SINE Alu -71 241 86 4079 197 7 3 chr18 32532544 32533251 -53455683 + L1MA4 LINE L1 1 710 -4618 5580 204 31 36 chr18 32533279 32535195 -53453739 + L1MA4 LINE L1 772 2682 -3646 1158 217 171 8 chr18 32535195 32535453 -53453481 + AluSg SINE Alu 1 300 0 5580 204 31 36 chr18 32535453 32535703 -53453231 + L1MA4 LINE L1 2682 2932 -3396 1040 100 0 0 chr18 32535725 32535855 -53453079 + AluSp SINE Alu 3 132 -181 23 33 0 0 chr18 32535855 32535885 -53453049 + AT_rich Low_complexity Low_complexity 1 30 0 1321 99 50 0 chr18 32535953 32536134 -53452800 + AluSp SINE Alu 113 302 -11 4941 169 55 9 chr18 32536136 32537164 -53451770 + L1MA4 LINE L1 2959 4034 -2294 2151 126 43 6 chr18 32537165 32537514 -53451420 + L1MA4 LINE L1 5840 6201 -281 291 209 78 9 chr18 32537494 32537609 -53451325 + L1MB3 LINE L1 6060 6182 -1 * 519 194 230 22 chr18 32537689 32537828 -53451106 + MER5B DNA MER1_type 1 168 -10 395 226 61 35 chr18 32537924 32538039 -53450895 + L2 LINE L2 3186 3303 -10 23 0 0 0 chr18 32538117 32538140 -53450794 + AT_rich Low_complexity Low_complexity 1 23 0 901 206 17 6 chr18 32539131 32539311 -53449623 - MER5A DNA MER1_type 0 189 8 525 239 18 114 chr18 32539324 32539416 -53449518 - LTR16C LTR ERVL 0 491 392 1472 159 76 23 chr18 32539416 32539680 -53449254 + AluJb SINE Alu 1 278 -34 284 250 10 0 chr18 32539680 32539776 -53449158 + GA-rich Low_complexity Low_complexity 2 98 0 1672 155 15 4 chr18 32539782 32540049 -53448885 + AluJo SINE Alu 22 289 -23 1247 63 0 11 chr18 32540049 32540224 -53448710 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 525 239 18 114 chr18 32540224 32540359 -53448575 - LTR16C LTR ERVL -103 388 190 630 312 130 54 chr18 32540555 32541655 -53447279 - L2 LINE L2 -98 3174 1996 2294 116 0 3 chr18 32542343 32542653 -53446281 + AluSq SINE Alu 1 309 -4 432 217 116 0 chr18 32542665 32542794 -53446140 + L1ME3A LINE L1 6027 6170 0 422 113 0 14 chr18 32543027 32543098 -53445836 + (GGAA)n Simple_repeat Simple_repeat 4 73 0 1815 182 0 7 chr18 32543315 32543622 -53445312 - AluJb SINE Alu -7 305 1 730 139 0 109 chr18 32544011 32544148 -53444786 - AluJb SINE Alu -189 123 2 493 310 231 25 chr18 32544354 32544987 -53443947 + L3 LINE CR1 467 1229 -348 1481 87 23 9 chr18 32545127 32545345 -53443589 - pTR5 LTR ERV1 -2046 392 172 313 224 41 31 chr18 32545348 32545446 -53443488 - LTR30 LTR ERV1 -80 642 544 4241 120 75 57 chr18 32545450 32546402 -53442532 - pTR5 LTR ERV1 -417 2021 738 2505 62 7 0 chr18 32546710 32547014 -53441920 + AluY SINE Alu 1 306 -5 1749 172 0 23 chr18 32547027 32547329 -53441605 + AluJb SINE Alu 1 295 -17 21 36 0 0 chr18 32547630 32547658 -53441276 + AT_rich Low_complexity Low_complexity 1 28 0 256 217 0 0 chr18 32547661 32547707 -53441227 - MIR SINE MIR -61 147 102 1652 124 0 66 chr18 32547726 32548000 -53440934 + AluSx SINE Alu 49 304 -8 25 40 0 20 chr18 32548280 32548306 -53440628 + AT_rich Low_complexity Low_complexity 1 27 -22 1726 134 17 41 chr18 32548306 32548435 -53440499 + AluJb SINE Alu 1 132 -180 2518 65 3 3 chr18 32548435 32548742 -53440192 + AluSp SINE Alu 1 307 -6 1726 134 17 41 chr18 32548742 32548904 -53440030 + AluJb SINE Alu 132 285 -27 25 40 0 20 chr18 32548904 32548927 -53440007 + AT_rich Low_complexity Low_complexity 27 49 0 189 0 0 0 chr18 32548988 32549009 -53439925 + (TA)n Simple_repeat Simple_repeat 1 21 0 394 250 46 0 chr18 32549026 32549134 -53439800 + L2 LINE L2 3201 3313 0 277 263 38 12 chr18 32549284 32549364 -53439570 + L1MC/D LINE L1 5603 5684 -2124 1984 147 0 10 chr18 32549505 32549804 -53439130 + AluSx SINE Alu 1 296 -16 22 0 0 0 chr18 32550199 32550221 -53438713 + AT_rich Low_complexity Low_complexity 1 22 0 2492 67 0 3 chr18 32550341 32550640 -53438294 - AluY SINE Alu -13 298 1 3889 119 72 67 chr18 32550743 32551735 -53437199 - pTR5 LTR ERV1 -404 2034 727 2469 58 7 0 chr18 32552030 32552325 -53436609 + AluY SINE Alu 1 297 -14 21 36 0 0 chr18 32552826 32552854 -53436080 + AT_rich Low_complexity Low_complexity 1 28 0 2271 98 3 19 chr18 32553500 32553815 -53435119 - AluSx SINE Alu -2 310 1 825 190 0 52 chr18 32554369 32554543 -53434391 + FRAM SINE Alu 1 165 -1 1569 73 5 36 chr18 32554641 32554860 -53434074 - AluSc SINE Alu -18 291 80 3310 57 27 7 chr18 32554863 32555302 -53433632 - LTR7 LTR ERV1 -2 448 1 669 61 0 0 chr18 32555302 32555384 -53433550 - AluY SINE Alu -235 83 2 225 256 156 0 chr18 32555881 32555971 -53432963 + MIR SINE MIR 51 154 -108 3807 98 0 56 chr18 32557294 32557848 -53431086 - MER1A DNA MER1_type -3 526 4 219 352 80 5 chr18 32559806 32560005 -53428929 + L2 LINE L2 1693 1906 -1408 200 239 292 0 chr18 32560567 32560697 -53428237 + L2 LINE L2 3132 3299 -14 2428 62 14 0 chr18 32561098 32561386 -53427548 + AluSp SINE Alu 1 292 -21 300 53 0 0 chr18 32563320 32563358 -53425576 + (TC)n Simple_repeat Simple_repeat 1 38 0 1846 112 4 0 chr18 32564194 32564445 -53424489 + AluSq SINE Alu 45 296 -17 518 245 148 7 chr18 32565428 32565583 -53423351 + MER5A DNA MER1_type 7 183 -6 1920 139 20 7 chr18 32565589 32565890 -53423044 + AluSg SINE Alu 2 306 -4 1441 157 142 22 chr18 32565905 32566173 -53422761 + AluSg SINE Alu 1 300 0 994 311 73 12 chr18 32567219 32567701 -53421233 - L3 LINE CR1 -10 1567 1057 280 372 0 19 chr18 32567894 32568050 -53420884 - MER117 DNA MER1_type 0 197 45 23 33 0 0 chr18 32569544 32569574 -53419360 + AT_rich Low_complexity Low_complexity 1 30 0 227 191 43 0 chr18 32571528 32571575 -53417359 - L2 LINE L2 -68 3204 3156 341 241 0 12 chr18 32573981 32574064 -53414870 + L2 LINE L2 3190 3271 -1 238 351 9 18 chr18 32574114 32574228 -53414706 - MIR SINE MIR -75 133 21 623 242 38 137 chr18 32574774 32575146 -53413788 + Charlie2 DNA MER1_type 1 335 -2527 256 189 0 19 chr18 32575152 32575205 -53413729 + Charlie2 DNA MER1_type 1882 1933 -929 1412 214 61 28 chr18 32575212 32575684 -53413250 + Charlie2 DNA MER1_type 2369 2856 -6 262 289 211 31 chr18 32576512 32576706 -53412228 + MIR SINE MIR 19 247 -15 21 0 0 0 chr18 32576739 32576760 -53412174 + AT_rich Low_complexity Low_complexity 1 21 0 611 269 138 29 chr18 32577150 32577533 -53411401 + L1ME4a LINE L1 5502 5926 -195 210 224 0 0 chr18 32579563 32579612 -53409322 + (CCG)n Simple_repeat Simple_repeat 3 51 0 38 85 0 0 chr18 32579627 32579721 -53409213 + GC_rich Low_complexity Low_complexity 1 94 0 27 29 0 0 chr18 32579789 32579823 -53409111 + GC_rich Low_complexity Low_complexity 1 34 0 24 53 0 0 chr18 32580123 32580161 -53408773 + GC_rich Low_complexity Low_complexity 1 38 0 236 316 40 0 chr18 32580840 32580916 -53408018 - MIR SINE MIR -144 118 40 227 29 57 0 chr18 32581026 32581061 -53407873 + (TTTC)n Simple_repeat Simple_repeat 1 37 0 2429 50 0 27 chr18 32581490 32581791 -53407143 + AluSq SINE Alu 1 293 -20 605 257 128 0 chr18 32582562 32582749 -53406185 + MIR SINE MIR 31 241 -21 348 334 54 54 chr18 32583557 32583889 -53405045 + L2 LINE L2 2933 3264 -8 1778 149 4 4 chr18 32584016 32584297 -53404637 - AluJo SINE Alu -3 309 29 2180 103 3 3 chr18 32584342 32584633 -53404301 + AluSc SINE Alu 1 291 -18 363 23 0 0 chr18 32586356 32586400 -53402534 + (TG)n Simple_repeat Simple_repeat 2 45 0 2260 109 17 0 chr18 32586536 32586838 -53402096 + AluSx SINE Alu 1 307 -5 799 191 48 48 chr18 32587018 32587227 -53401707 + MER112 DNA MER1_type 39 247 -13 306 0 0 0 chr18 32587276 32587309 -53401625 - U2 snRNA snRNA -155 33 1 202 233 0 0 chr18 32587437 32587480 -53401454 + (TATATG)n Simple_repeat Simple_repeat 5 47 0 1204 261 88 25 chr18 32588457 32588983 -53399951 - L1ME4a LINE L1 -27 6094 5536 282 293 195 24 chr18 32589199 32589496 -53399438 - L2 LINE L2 -927 2387 2040 2045 236 55 2 chr18 32589713 32590204 -53398730 - LTR40a LTR ERVL -2 517 1 3592 120 23 4 chr18 32590338 32590855 -53398079 - MER1A DNA MER1_type 0 527 1 194 311 104 47 chr18 32590951 32591057 -53397877 + L2 LINE L2 3197 3308 -5 285 29 0 0 chr18 32591261 32591295 -53397639 + (T)n Simple_repeat Simple_repeat 1 34 0 291 253 103 54 chr18 32591314 32591538 -53397396 + L1ME LINE L1 5497 5731 -390 600 287 120 34 chr18 32593340 32593691 -53395243 - L1M4 LINE L1 -2938 3208 2889 2720 135 11 23 chr18 32593691 32594129 -53394805 - Tigger2a DNA MER2_type -1 433 1 600 287 120 34 chr18 32594129 32594697 -53394237 - L1M4 LINE L1 -3257 2889 2210 182 343 104 0 chr18 32595102 32595169 -53393765 + L2 LINE L2 3144 3217 -55 288 265 162 0 chr18 32595434 32595551 -53393383 + L2 LINE L2 3137 3272 0 426 368 26 0 chr18 32595888 32596081 -53392853 - MIR SINE MIR -8 254 57 2006 129 17 0 chr18 32596156 32596451 -53392483 - AluSx SINE Alu -12 300 1 388 325 106 12 chr18 32596846 32597006 -53391928 + MIR SINE MIR 29 203 -59 1502 177 44 33 chr18 32597870 32598141 -53390793 - AluJb SINE Alu -21 291 18 2820 229 73 48 chr18 32599031 32599423 -53389511 + L1MC5 LINE L1 6499 6880 -1081 2098 128 3 19 chr18 32599423 32599735 -53389199 + AluSx SINE Alu 1 307 -5 2820 229 73 48 chr18 32599735 32600695 -53388239 + L1MC5 LINE L1 6880 7907 -54 2109 120 17 0 chr18 32601031 32601322 -53387612 - AluSx SINE Alu -16 296 1 25 31 0 0 chr18 32601331 32601363 -53387571 + AT_rich Low_complexity Low_complexity 1 32 0 501 288 203 32 chr18 32601481 32602356 -53386578 - HAL1 LINE L1 -559 1948 924 232 331 22 44 chr18 32602422 32602603 -53386331 - HAL1 LINE L1 -1674 833 657 563 323 70 58 chr18 32602673 32603187 -53385747 + LTR33 LTR ERVL 1 520 -1 1204 120 11 0 chr18 32604062 32604245 -53384689 - L1PB1 LINE L1 -8 6859 6675 351 75 0 60 chr18 32604245 32604310 -53384624 - L1PA7 LINE L1 -1 6153 6091 14229 175 35 18 chr18 32604310 32607395 -53381539 - L1PB1 LINE L1 -179 6688 3657 2168 119 0 7 chr18 32607395 32607698 -53381236 - AluSq SINE Alu -12 301 1 14229 175 35 18 chr18 32607698 32608941 -53379993 - L1PB1 LINE L1 -3210 3657 2436 2340 88 0 7 chr18 32608941 32609237 -53379697 + AluSp SINE Alu 3 296 -17 14229 175 35 18 chr18 32609237 32611325 -53377609 - L1PB1 LINE L1 -4431 2436 6 256 286 0 67 chr18 32611559 32611664 -53377270 - LTR16A LTR ERVL -1 449 352 1036 320 83 27 chr18 32611675 32612292 -53376642 + ERVL LTR ERVL 2839 3464 -2190 1727 195 9 20 chr18 32612292 32612635 -53376299 - MER58B DNA MER1_type -2 339 1 1036 320 83 27 chr18 32612635 32612743 -53376191 + ERVL LTR ERVL 3464 3565 -2089 752 276 92 46 chr18 32612859 32613254 -53375680 + ERVL LTR ERVL 3758 4164 -1321 588 321 36 27 chr18 32613587 32613920 -53375014 - ERVL LTR ERVL -650 4835 4500 246 238 0 0 chr18 32614255 32614339 -53374595 - L1MC4 LINE L1 -1345 6697 6614 192 97 0 0 chr18 32614339 32614370 -53374564 + (TA)n Simple_repeat Simple_repeat 2 32 0 412 231 0 22 chr18 32614423 32614514 -53374420 - L1MC4 LINE L1 -1339 6703 6615 429 292 48 41 chr18 32614561 32614852 -53374082 - ERVL LTR ERVL -1402 4083 3801 1522 362 33 22 chr18 32614985 32616029 -53372905 - ERVL LTR ERVL -2100 3664 2610 1770 261 45 40 chr18 32616345 32616992 -53371942 - MER76 LTR ERV -38 650 1 400 267 71 81 chr18 32616992 32617314 -53371620 + ERVL LTR ERVL 5025 5343 -421 288 0 0 0 chr18 32617410 32617442 -53371492 + (CA)n Simple_repeat Simple_repeat 2 33 0 261 0 0 0 chr18 32617475 32617504 -53371430 + (CA)n Simple_repeat Simple_repeat 1 29 0 842 325 68 15 chr18 32617759 32618215 -53370719 + LTR33 LTR ERVL 1 480 -41 21 0 0 0 chr18 32618812 32618833 -53370101 + AT_rich Low_complexity Low_complexity 1 21 0 628 279 120 0 chr18 32620180 32620463 -53368471 + LTR33 LTR ERVL 205 521 0 892 160 0 0 chr18 32620591 32620722 -53368212 + AluSx SINE Alu 1 131 -182 200 33 0 33 chr18 32620906 32620936 -53367998 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 952 182 6 0 chr18 32623456 32623615 -53365319 + AluSx SINE Alu 137 296 -16 24 96 0 0 chr18 32623697 32623770 -53365164 + AT_rich Low_complexity Low_complexity 1 73 0 366 291 125 0 chr18 32623782 32623926 -53365008 - MIR SINE MIR -57 151 40 2030 123 85 15 chr18 32624537 32624877 -53364057 + THE1B LTR MaLR 1 364 0 1684 193 33 0 chr18 32624920 32625195 -53363739 - AluJo SINE Alu -28 284 1 1593 163 78 59 chr18 32625403 32625790 -53363144 - MER83 LTR ERV1 0 448 55 701 106 0 26 chr18 32625793 32625906 -53363028 - MER83 LTR ERV1 -338 110 1 289 295 67 19 chr18 32625906 32626011 -53362923 - L2 LINE L2 -17 3296 3187 461 322 86 6 chr18 32626175 32626349 -53362585 - MIR SINE MIR -54 208 21 1718 158 28 31 chr18 32626406 32626697 -53362237 + AluJb SINE Alu 14 303 -9 220 317 67 17 chr18 32626767 32626887 -53362047 - L3 LINE CR1 -238 1339 1214 23 33 0 0 chr18 32627824 32627854 -53361080 + AT_rich Low_complexity Low_complexity 1 30 0 570 195 24 55 chr18 32629172 32629336 -53359598 + MIR SINE MIR 104 262 0 2176 107 0 0 chr18 32630221 32630502 -53358432 + AluSg SINE Alu 1 281 -29 1496 186 8 8 chr18 32630502 32630765 -53358169 + AluJo SINE Alu 34 296 -16 2560 143 8 44 chr18 32630773 32631198 -53357736 - L1MC3 LINE L1 -761 7024 6618 2269 133 22 48 chr18 32631198 32631598 -53357336 - MLT1B LTR MaLR 0 390 1 2560 143 8 44 chr18 32631598 32631676 -53357258 - L1MC3 LINE L1 -1167 6618 6539 2036 119 14 0 chr18 32631755 32632033 -53356901 + AluSx SINE Alu 20 301 -11 954 219 57 103 chr18 32632034 32632472 -53356462 - L1MD2 LINE L1 -13 6229 5812 1499 154 113 8 chr18 32632518 32632784 -53356150 - AluJo SINE Alu -18 294 1 218 284 95 34 chr18 32633224 32633372 -53355562 - L2 LINE L2 -2 3311 3155 279 172 35 0 chr18 32633379 32633437 -53355497 - Charlie1 DNA MER1_type -1 2760 2701 221 106 0 21 chr18 32633538 32633585 -53355349 + (TA)n Simple_repeat Simple_repeat 1 46 0 508 243 199 11 chr18 32633613 32633794 -53355140 - Charlie1 DNA MER1_type -2546 215 1 634 203 85 11 chr18 32634091 32634268 -53354666 + L1MD2 LINE L1 5644 5833 -526 25 31 0 0 chr18 32634761 32634793 -53354141 + AT_rich Low_complexity Low_complexity 1 32 0 277 208 0 0 chr18 32635131 32635179 -53353755 + L2 LINE L2 3265 3312 -1 220 339 122 9 chr18 32635219 32635334 -53353600 - L2 LINE L2 -5 3267 3140 256 323 10 0 chr18 32636511 32636610 -53352324 - L2 LINE L2 -2483 831 732 524 165 8 75 chr18 32636788 32636921 -53352013 - MER20 DNA MER1_type -29 190 67 2432 89 0 0 chr18 32637051 32637355 -53351579 - AluSc SINE Alu -5 304 1 2054 124 0 3 chr18 32637360 32637650 -53351284 - AluSx SINE Alu -23 289 1 225 197 61 0 chr18 32638925 32638991 -53349943 - L1ME LINE L1 -186 5935 5866 797 194 32 16 chr18 32640275 32640461 -53348473 + MER5A DNA MER1_type 1 189 0 786 231 142 34 chr18 32641352 32641677 -53347257 + MLT1A1 LTR MaLR 1 419 -7 465 291 53 91 chr18 32641719 32642004 -53346930 + L2 LINE L2 3039 3312 -1 213 39 0 0 chr18 32642023 32642049 -53346885 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 587 137 0 11 chr18 32642202 32642297 -53346637 + MER5A DNA MER1_type 96 189 0 1825 85 61 37 chr18 32642428 32642826 -53346108 - LTR7 LTR ERV1 0 450 1 1573 200 162 42 chr18 32642860 32643054 -53345880 - MLT1D LTR MaLR 0 505 336 2163 101 7 0 chr18 32643054 32643342 -53345592 - AluSx SINE Alu -22 290 1 1573 200 162 42 chr18 32643342 32643598 -53345336 - MLT1D LTR MaLR -169 336 1 243 331 69 8 chr18 32644137 32644267 -53344667 + MIR SINE MIR 119 256 -6 245 241 17 0 chr18 32644608 32644666 -53344268 + L2 LINE L2 3214 3272 0 453 323 51 91 chr18 32644673 32645004 -53343930 + L2 LINE L2 2954 3271 -1 676 130 0 0 chr18 32645385 32645493 -53343441 - AluSg/x SINE Alu -1 309 202 1647 168 7 3 chr18 32645513 32645798 -53343136 + AluJb SINE Alu 5 290 -22 185 0 40 0 chr18 32645812 32645837 -53343097 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 184 346 79 0 chr18 32646195 32646296 -53342638 + L2 LINE L2 1873 1981 -1333 387 341 93 42 chr18 32646353 32647031 -53341903 - L2 LINE L2 -5 3267 2563 1601 173 6 76 chr18 32647089 32647418 -53341516 + AluJo SINE Alu 1 306 -6 392 283 207 14 chr18 32647665 32647810 -53341124 - MER5A DNA MER1_type 0 189 17 355 221 0 15 chr18 32647840 32647908 -53341026 + L2 LINE L2 3203 3269 -3 2017 130 40 0 chr18 32648589 32648888 -53340046 + AluSq SINE Alu 1 311 -2 2504 74 0 3 chr18 32652013 32652324 -53336610 - AluY SINE Alu -1 310 1 504 296 81 12 chr18 32652464 32652636 -53336298 + MIR SINE MIR 28 211 -51 470 236 173 32 chr18 32652643 32652863 -53336071 + MIR SINE MIR 6 256 -6 285 219 109 84 chr18 32652902 32653021 -53335913 + MIR SINE MIR 20 141 -121 1022 81 0 0 chr18 32654101 32654225 -53334709 + AluSq/x SINE Alu 1 124 -189 1482 181 4 11 chr18 32654931 32655191 -53333743 - AluJb SINE Alu -23 289 32 429 299 129 11 chr18 32655477 32655755 -53333179 - L1MC/D LINE L1 -1992 5816 5506 2487 61 0 0 chr18 32656214 32656511 -53332423 - AluY SINE Alu -14 297 1 272 309 73 45 chr18 32656631 32656809 -53332125 + L2 LINE L2 3122 3304 -9 27 0 0 0 chr18 32656886 32656913 -53332021 + AT_rich Low_complexity Low_complexity 1 27 0 1920 187 65 0 chr18 32656916 32657375 -53331559 - Charlie1 DNA MER1_type -130 2631 2143 395 277 0 0 chr18 32657390 32657491 -53331443 - MER65B LTR ERV1 -390 141 41 1476 156 24 24 chr18 32657492 32657795 -53331139 - L1MC3 LINE L1 -3 7782 6027 571 324 78 5 chr18 32658822 32659041 -53329893 - MIR SINE MIR -8 254 20 185 320 180 10 chr18 32659306 32659406 -53329528 - L2 LINE L2 0 3313 3197 180 364 195 23 chr18 32659508 32659672 -53329262 + L2 LINE L2 2025 2160 -1154 1875 104 15 92 chr18 32659672 32659999 -53328935 - AluSx SINE Alu -10 302 1 180 364 195 23 chr18 32659999 32660435 -53328499 + L2 LINE L2 2160 2728 -586 841 270 19 42 chr18 32660463 32660722 -53328212 + MIR SINE MIR 5 257 -5 398 334 109 67 chr18 32660778 32661209 -53327725 + L2 LINE L2 2812 3260 -12 2367 93 3 3 chr18 32661213 32661525 -53327409 - AluSx SINE Alu 0 312 1 552 310 58 0 chr18 32661537 32661711 -53327223 - MIR3 SINE MIR -10 198 15 308 358 77 39 chr18 32661894 32662154 -53326780 + L2 LINE L2 2007 2276 -1038 303 286 57 9 chr18 32662154 32662259 -53326675 + MER91C DNA MER1_type 1 110 -30 726 292 78 63 chr18 32662526 32663117 -53325817 + L2 LINE L2 2472 3084 -188 22 0 0 0 chr18 32664375 32664397 -53324537 + AT_rich Low_complexity Low_complexity 1 22 0 192 77 0 0 chr18 32664616 32664642 -53324292 + (TC)n Simple_repeat Simple_repeat 2 27 0 2634 23 0 3 chr18 32665098 32665402 -53323532 - AluY SINE Alu -7 304 2 734 66 175 7 chr18 32665478 32665615 -53323319 + MSTA LTR MaLR 1 160 -268 2639 39 0 0 chr18 32665783 32666088 -53322846 - AluY SINE Alu -5 306 2 1703 125 140 15 chr18 32666164 32666507 -53322427 + MSTA LTR MaLR 1 386 -42 354 338 52 45 chr18 32667259 32667546 -53321388 + L2 LINE L2 2342 2630 -684 2184 247 77 87 chr18 32667613 32668924 -53320010 - Charlie2b DNA MER1_type -546 2316 1020 2273 106 0 0 chr18 32668924 32669217 -53319717 - AluSq SINE Alu -20 293 1 2184 247 77 87 chr18 32669217 32669414 -53319520 - Charlie2b DNA MER1_type -1842 1020 823 700 299 30 36 chr18 32669414 32669749 -53319185 - LTR16C LTR ERVL -3 488 156 717 225 65 78 chr18 32669931 32670238 -53318696 - Charlie2b DNA MER1_type -2003 779 477 617 242 81 70 chr18 32670249 32670547 -53318387 - Charlie2b DNA MER1_type -2518 344 44 1831 164 18 0 chr18 32670598 32670884 -53318050 - AluJo SINE Alu -21 291 1 612 145 0 0 chr18 32671047 32671164 -53317770 + (TCCC)n Simple_repeat Simple_repeat 2 118 0 1412 193 62 0 chr18 32671165 32671424 -53317510 - AluJo SINE Alu -37 275 1 181 146 49 24 chr18 32672933 32672974 -53315960 - MIR SINE MIR -218 44 3 273 313 53 40 chr18 32673097 32673247 -53315687 - MIR SINE MIR -7 255 104 1559 215 0 7 chr18 32673273 32673561 -53315373 - AluJo SINE Alu -26 286 1 214 264 83 0 chr18 32673674 32673746 -53315188 + L2 LINE L2 2313 2390 -924 252 338 14 50 chr18 32673911 32674050 -53314884 + L2 LINE L2 2611 2744 -570 839 10 0 0 chr18 32674153 32674251 -53314683 - L1PA2 LINE L1 0 6155 6058 192 346 16 63 chr18 32674342 32674469 -53314465 + L2 LINE L2 2951 3071 -201 2058 101 44 17 chr18 32674545 32674841 -53314093 + AluSg SINE Alu 1 304 -6 424 192 0 0 chr18 32674997 32675075 -53313859 - MSTC LTR MaLR -350 78 1 1570 168 72 20 chr18 32675439 32675731 -53313203 + AluJo SINE Alu 1 307 -5 533 307 123 51 chr18 32676083 32676192 -53312742 - L1MC/D LINE L1 -346 5775 5675 2669 174 51 6 chr18 32676192 32676664 -53312270 - LTR42 LTR ERVL -2 493 1 533 307 123 51 chr18 32676664 32677240 -53311694 - L1MC/D LINE L1 -446 5675 5040 1396 186 128 3 chr18 32677246 32677558 -53311376 - MSTD LTR MaLR 0 396 46 1085 195 114 62 chr18 32677559 32677980 -53310954 + LTR7 LTR ERV1 1 443 -7 290 104 21 0 chr18 32677987 32678035 -53310899 - MSTD LTR MaLR -347 49 1 909 254 99 102 chr18 32678058 32678585 -53310349 - MER77 LTR ERV1 -4 601 141 357 238 16 66 chr18 32678633 32678755 -53310179 - MER77 LTR ERV1 -436 169 54 1591 219 127 56 chr18 32678917 32679573 -53309361 + MER50 LTR ERV1 14 715 -19 238 280 97 45 chr18 32679672 32680300 -53308634 - L1MC/D LINE L1 -1300 4846 4186 413 348 11 11 chr18 32680335 32680516 -53308418 - L1MC/D LINE L1 -2025 4121 3941 3232 161 10 4 chr18 32680523 32681603 -53307331 + L1P5 LINE L1 4681 5766 -385 298 326 58 0 chr18 32682418 32682556 -53306378 + MIR SINE MIR 29 174 -88 2564 106 17 6 chr18 32682606 32682966 -53305968 + THE1B LTR MaLR 1 364 0 429 166 0 173 chr18 32683153 32683292 -53305642 + MIR3 SINE MIR 76 190 -18 431 321 49 0 chr18 32683335 32683497 -53305437 + L3b LINE CR1 1258 1427 -156 2310 89 7 3 chr18 32684084 32684388 -53304546 + AluSq SINE Alu 1 305 -8 451 369 10 100 chr18 32686487 32686777 -53302157 - L2 LINE L2 -22 3250 2987 5107 166 33 32 chr18 32686911 32687979 -53300955 + MER11C LTR ERVK 3 1071 0 22 56 0 0 chr18 32688027 32688063 -53300871 + AT_rich Low_complexity Low_complexity 1 36 0 707 194 0 8 chr18 32688460 32688584 -53300350 - FLAM_A SINE Alu -10 123 1 196 292 56 0 chr18 32688587 32688659 -53300275 + L2 LINE L2 2911 2986 -286 380 319 43 25 chr18 32688836 32688999 -53299935 - MIR3 SINE MIR -5 203 38 887 268 98 12 chr18 32689006 32689469 -53299465 + MLT1K LTR MaLR 55 588 0 21 36 0 0 chr18 32689492 32689520 -53299414 + AT_rich Low_complexity Low_complexity 1 28 0 1035 167 0 12 chr18 32689692 32689860 -53299074 - AluJb SINE Alu -3 309 144 199 304 0 0 chr18 32689917 32689963 -53298971 + L2 LINE L2 3144 3189 -83 376 220 186 17 chr18 32690003 32690121 -53298813 - MIR SINE MIR -1 261 124 264 329 32 44 chr18 32692287 32692445 -53296489 + MIR SINE MIR 57 212 -50 2848 204 22 19 chr18 32692735 32693126 -53295808 + MER82 DNA MER2_type 1 396 -257 297 0 0 0 chr18 32693126 32693159 -53295775 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 2848 204 22 19 chr18 32693159 32693388 -53295546 + MER82 DNA MER2_type 396 623 -30 272 357 39 26 chr18 32693413 32693567 -53295367 + L3 LINE CR1 1311 1466 -111 1015 23 30 0 chr18 32694598 32694730 -53294204 + (TCTA)n Simple_repeat Simple_repeat 3 138 0 2336 73 0 3 chr18 32694730 32695009 -53293925 - AluY SINE Alu -31 280 1 1535 171 63 57 chr18 32695011 32695379 -53293555 - L1MB3 LINE L1 -42 6141 5768 2276 108 6 10 chr18 32695379 32695693 -53293241 + AluSq SINE Alu 1 313 0 1535 171 63 57 chr18 32695693 32695797 -53293137 - L1MB3 LINE L1 -415 5768 5666 1426 249 67 15 chr18 32695808 32696331 -53292603 - L1MC4 LINE L1 -544 7498 6949 1508 162 49 15 chr18 32696490 32696786 -53292148 - AluJb SINE Alu 0 311 7 6409 203 84 23 chr18 32696998 32698729 -53290205 + L1MDa LINE L1 256 2091 -4449 231 139 0 0 chr18 32698725 32698768 -53290166 + L1MDa LINE L1 3126 3168 -3372 * 342 323 30 36 chr18 32698849 32699152 -53289782 - L1MC4a LINE L1 -1231 6577 6277 536 234 61 15 chr18 32699184 32699381 -53289553 - L1MC4a LINE L1 -1773 6035 5830 214 147 0 0 chr18 32700568 32700602 -53288332 + (TG)n Simple_repeat Simple_repeat 1 34 0 283 186 17 160 chr18 32700678 32700812 -53288122 - MIR SINE MIR -48 160 44 2414 71 0 0 chr18 32701562 32701859 -53287075 - AluY SINE Alu -14 297 1 469 360 74 63 chr18 32701905 32702283 -53286651 - L2 LINE L2 0 3272 2891 592 227 8 0 chr18 32702449 32702581 -53286353 + MER69 DNA AcHobo 12 144 -1082 251 246 0 0 chr18 32702595 32702656 -53286278 + MER69 DNA AcHobo 2466 2526 0 299 291 132 23 chr18 32702677 32702935 -53285999 - L2 LINE L2 -631 2683 2398 257 312 55 0 chr18 32702988 32703097 -53285837 - L2 LINE L2 -1315 1999 1885 802 287 49 43 chr18 32704415 32704760 -53284174 - L3 LINE CR1 -667 910 564 267 295 19 19 chr18 32704942 32705047 -53283887 - L3 LINE CR1 -1005 572 468 1192 194 50 14 chr18 32705143 32705421 -53283513 + LTR40b LTR ERVL 156 443 -19 12015 138 26 17 chr18 32705428 32707529 -53281405 + L1PBa LINE L1 2 2122 -4741 1942 96 3 0 chr18 32707523 32707805 -53281129 + L1PB1 LINE L1 5508 5790 -361 * 328 190 10 10 chr18 32707815 32707915 -53281019 + (TA)n Simple_repeat Simple_repeat 2 101 0 2554 93 19 0 chr18 32707920 32708284 -53280650 + L1PB1 LINE L1 5776 6146 -5 5949 132 13 18 chr18 32708381 32708559 -53280375 - L1MA3 LINE L1 -8 7716 7539 2164 107 0 3 chr18 32708559 32708850 -53280084 + AluY SINE Alu 5 294 -17 5949 132 13 18 chr18 32708850 32709720 -53279214 - L1MA3 LINE L1 -185 7539 6673 5405 209 86 37 chr18 32709833 32711087 -53277847 - L1MDa LINE L1 -4923 1617 425 2091 138 13 10 chr18 32711087 32711392 -53277542 - AluSx SINE Alu -6 306 1 5405 209 86 37 chr18 32711392 32711465 -53277469 - L1MDa LINE L1 -6115 425 357 832 221 0 17 chr18 32711465 32711637 -53277297 + FAM SINE Alu 1 169 -6 5405 209 86 37 chr18 32711637 32711836 -53277098 - L1MDa LINE L1 -6183 357 16 514 249 105 24 chr18 32711900 32712109 -53276825 + L1MC4 LINE L1 6727 6952 -1090 1521 158 49 15 chr18 32712232 32712528 -53276406 + AluJb SINE Alu 7 311 0 1484 247 65 13 chr18 32712687 32713210 -53275724 + L1MC4 LINE L1 6949 7498 -544 1065 203 66 56 chr18 32713221 32713326 -53275608 + L1MB3 LINE L1 5666 5768 -415 2319 99 6 10 chr18 32713326 32713640 -53275294 - AluSq SINE Alu 0 313 1 1065 203 66 56 chr18 32713640 32713929 -53275005 + L1MB3 LINE L1 5768 6064 -119 1331 135 5 29 chr18 32714029 32714237 -53274697 - AluSp SINE Alu -110 203 1 12831 157 17 43 chr18 32714240 32715017 -53273917 - L1MA3 LINE L1 -1193 6372 5576 2104 117 3 0 chr18 32715017 32715337 -53273597 - AluSp SINE Alu 0 321 1 12831 157 17 43 chr18 32715337 32717682 -53271252 - L1MA3 LINE L1 -1989 5576 3331 21 0 0 0 chr18 32717682 32717703 -53271231 + AT_rich Low_complexity Low_complexity 1 21 0 1991 4 0 0 chr18 32717705 32717939 -53270995 - L1HS LINE L1 -3 6152 5919 4748 162 38 17 chr18 32717970 32718863 -53270071 - L1MA3 LINE L1 -6642 923 12 443 216 72 32 chr18 32719958 32720083 -53268851 - MER5A DNA MER1_type 0 189 60 353 195 85 0 chr18 32720844 32720926 -53268008 + MER117 DNA MER1_type 51 139 -58 209 207 69 17 chr18 32721078 32721136 -53267798 + MIR SINE MIR 118 178 -84 432 249 264 15 chr18 32721210 32721413 -53267521 + MIR SINE MIR 3 260 -2 274 238 149 30 chr18 32721458 32721626 -53267308 + L3 LINE CR1 1254 1441 -136 24 32 0 0 chr18 32721633 32721664 -53267270 + AT_rich Low_complexity Low_complexity 1 31 0 1718 34 0 0 chr18 32721664 32721869 -53267065 - L1PA4 LINE L1 -3 6152 5948 2744 29 0 0 chr18 32721898 32722208 -53266726 + AluYa5 SINE Alu 1 310 -1 22 0 0 0 chr18 32723741 32723763 -53265171 + AT_rich Low_complexity Low_complexity 1 22 0 4375 126 34 9 chr18 32723765 32724063 -53264871 - L1PA16 LINE L1 -5 6161 5872 1713 112 0 4 chr18 32724063 32724296 -53264638 - AluSc SINE Alu -18 291 60 4375 126 34 9 chr18 32724296 32724730 -53264204 - L1PA16 LINE L1 -294 5872 5411 185 342 63 0 chr18 32725247 32725326 -53263608 + L2 LINE L2 3151 3234 -38 1201 218 25 50 chr18 32725580 32725938 -53262996 + MLT2C1 LTR ERVL 1 349 -48 344 145 0 13 chr18 32725938 32726014 -53262920 - L1MB8 LINE L1 -11 6167 6093 2890 163 44 5 chr18 32726034 32726585 -53262349 - L1MB4 LINE L1 -6 6174 5603 253 203 17 0 chr18 32726590 32726649 -53262285 + MLT2F LTR ERVL 604 663 0 22 0 0 0 chr18 32726747 32726769 -53262165 + AT_rich Low_complexity Low_complexity 1 22 0 1252 160 10 19 chr18 32726771 32726977 -53261957 - AluJo SINE Alu -23 289 86 21 0 0 0 chr18 32726977 32726998 -53261936 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr18 32727304 32727335 -53261599 + AT_rich Low_complexity Low_complexity 1 31 0 2439 90 3 12 chr18 32727335 32727678 -53261256 - L1PA8A LINE L1 0 6131 5792 366 257 66 44 chr18 32727823 32727959 -53260975 - L1MEd LINE L1 -5123 996 858 438 163 50 0 chr18 32728086 32728166 -53260768 - MIR SINE MIR 0 262 179 2007 214 82 14 chr18 32728167 32728682 -53260252 + MER77 LTR ERV1 52 601 -4 319 277 24 0 chr18 32728687 32728770 -53260164 - MIR SINE MIR -78 184 100 610 293 108 49 chr18 32728845 32729408 -53259526 - L2 LINE L2 -854 2460 1814 484 288 93 37 chr18 32729731 32729840 -53259094 + MIR SINE MIR 23 124 -138 1963 174 45 3 chr18 32729840 32730214 -53258720 - MLT1B LTR MaLR 0 390 1 484 288 93 37 chr18 32730214 32730319 -53258615 + MIR SINE MIR 124 249 -13 569 151 0 0 chr18 32732225 32732311 -53256623 + FRAM/FAM SINE Alu 1 85 -91 501 294 35 6 chr18 32732914 32733084 -53255850 + MER5A DNA MER1_type 9 183 -6 2714 86 3 24 chr18 32733179 32733562 -53255372 + THE1C LTR MaLR 1 375 0 2423 89 0 0 chr18 32734171 32734473 -53254461 + AluY SINE Alu 1 302 -9 340 288 0 0 chr18 32735471 32735551 -53253383 + MER81 DNA DNA 1 80 -34 347 316 20 46 chr18 32735881 32735895 -53253039 + MIR SINE MIR 3 16 -192 747 207 73 17 chr18 32735895 32736074 -53252860 + MER5A DNA MER1_type 1 189 0 347 316 20 46 chr18 32736074 32736211 -53252723 + MIR SINE MIR 16 147 -61 313 329 86 65 chr18 32737648 32737940 -53250994 + L2 LINE L2 2882 3179 -93 234 0 0 0 chr18 32739317 32739343 -53249591 + (T)n Simple_repeat Simple_repeat 1 26 0 190 214 71 0 chr18 32740002 32740044 -53248890 - L2 LINE L2 -18 3295 3251 324 240 10 20 chr18 32740226 32740326 -53248608 + L1MC5 LINE L1 7815 7913 -48 1048 172 88 23 chr18 32741027 32741289 -53247645 - L1MA9 LINE L1 0 6312 6034 967 178 10 29 chr18 32741451 32741659 -53247275 + MER3 DNA MER1_type 6 209 0 318 333 10 10 chr18 32741921 32742023 -53246911 + L2 LINE L2 2593 2694 -620 3379 110 86 29 chr18 32742027 32742275 -53246659 + LTR18B LTR ERVL 1 233 -381 252 0 0 0 chr18 32742275 32742303 -53246631 + (GA)n Simple_repeat Simple_repeat 2 29 0 3379 110 86 29 chr18 32742303 32742378 -53246556 + LTR18B LTR ERVL 233 302 -312 2531 54 0 0 chr18 32742378 32742675 -53246259 + AluY SINE Alu 1 297 -14 3379 110 86 29 chr18 32742675 32742931 -53246003 + LTR18B LTR ERVL 302 614 0 571 338 134 16 chr18 32742989 32743309 -53245625 + L2 LINE L2 2952 3309 -4 493 252 9 0 chr18 32743863 32743978 -53244956 + MER5A DNA MER1_type 7 122 -67 2780 207 13 22 chr18 32744272 32744828 -53244106 - MLT2B3 LTR ERVL 0 554 4 504 319 79 14 chr18 32744879 32745095 -53243839 - MIR SINE MIR -4 258 29 276 234 31 0 chr18 32745638 32745702 -53243232 - MIR SINE MIR -113 149 84 21 57 0 0 chr18 32746497 32746532 -53242402 + AT_rich Low_complexity Low_complexity 1 35 0 434 315 31 16 chr18 32747199 32747326 -53241608 - L2 LINE L2 -4 3268 3140 255 319 43 36 chr18 32747364 32747502 -53241432 - MIR SINE MIR 0 262 124 280 200 0 0 chr18 32747859 32747909 -53241025 + MLT1I LTR MaLR 93 142 -267 341 202 0 67 chr18 32748106 32748195 -53240739 + MLT1I LTR MaLR 318 400 -9 202 288 17 0 chr18 32749318 32749377 -53239557 + CT-rich Low_complexity Low_complexity 4 63 0 275 200 0 27 chr18 32750245 32750320 -53238614 + (CATATA)n Simple_repeat Simple_repeat 1 73 0 2270 110 48 25 chr18 32750421 32750777 -53238157 + THE1B LTR MaLR 1 364 0 3605 19 0 0 chr18 32751002 32751415 -53237519 - L1PA3 LINE L1 -118 6037 5625 1023 40 0 0 chr18 32751415 32751539 -53237395 + L1PA3 LINE L1 6031 6155 0 216 0 0 0 chr18 32752103 32752127 -53236807 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 22 35 0 0 chr18 32752381 32752410 -53236524 + AT_rich Low_complexity Low_complexity 1 29 0 4548 196 48 9 chr18 32752544 32754003 -53234931 - L1MD1 LINE L1 0 6636 5118 248 35 0 0 chr18 32754004 32754033 -53234901 - L1P2 LINE L1 -576 5579 5551 2748 10 0 0 chr18 32754033 32754342 -53234592 + L1PA3 LINE L1 5845 6153 -2 4880 231 61 34 chr18 32754714 32756439 -53232495 - L1MD1 LINE L1 -1478 5062 3290 825 218 31 0 chr18 32756458 32756651 -53232283 + L1MA8 LINE L1 5745 5943 -348 1767 236 41 33 chr18 32756656 32757265 -53231669 - L1MD1 LINE L1 -3239 3301 2688 1856 226 50 24 chr18 32757269 32757693 -53231241 - L1MD1 LINE L1 -6088 452 18 2351 100 0 0 chr18 32758056 32758357 -53230577 - AluSx SINE Alu -11 301 1 497 237 23 8 chr18 32758514 32758645 -53230289 - Zaphod DNA AcHobo -499 3532 3400 450 53 0 0 chr18 32758702 32758759 -53230175 + (TATG)n Simple_repeat Simple_repeat 2 58 0 388 208 0 115 chr18 32758785 32758915 -53230019 - MLT2C1 LTR ERVL -68 329 215 255 235 29 0 chr18 32758916 32758984 -53229950 + CT-rich Low_complexity Low_complexity 3 72 0 1098 135 0 0 chr18 32758994 32759179 -53229755 - L1MA4 LINE L1 -6 6294 6110 736 215 52 0 chr18 32759187 32759359 -53229575 - MLT2C1 LTR ERVL -216 181 1 322 203 0 0 chr18 32759370 32759439 -53229495 - Zaphod DNA AcHobo -670 3361 3293 730 187 116 0 chr18 32759482 32759637 -53229297 - MER20 DNA MER1_type -46 173 1 575 246 68 19 chr18 32759661 32759905 -53229029 - Zaphod DNA AcHobo -3417 614 321 1924 216 19 15 chr18 32760187 32760599 -53228335 - MLT2D LTR ERVL 0 414 1 492 280 102 11 chr18 32760641 32760827 -53228107 + MIR SINE MIR 6 208 -54 333 0 0 0 chr18 32760854 32760891 -53228043 + (CA)n Simple_repeat Simple_repeat 2 38 0 20363 154 25 29 chr18 32760909 32763939 -53224995 - L1MA2 LINE L1 0 7723 4682 2326 62 0 7 chr18 32763939 32764228 -53224706 + AluY SINE Alu 5 291 -20 20363 154 25 29 chr18 32764228 32765018 -53223916 - L1MA2 LINE L1 -3041 4682 3890 2172 133 3 0 chr18 32765018 32765320 -53223614 - AluSx SINE Alu -9 303 1 20363 154 25 29 chr18 32765320 32766994 -53221940 - L1MA2 LINE L1 -3833 3890 2210 1166 49 0 0 chr18 32766994 32767138 -53221796 - L1PA5 LINE L1 -3 6151 6008 20363 154 25 29 chr18 32767138 32769397 -53219537 - L1MA2 LINE L1 -5513 2210 10 282 288 0 0 chr18 32770171 32770237 -53218697 - MIR SINE MIR 0 262 197 304 309 124 0 chr18 32770239 32770336 -53218598 + MER81 DNA DNA 6 114 0 18739 92 5 1 chr18 32770508 32773963 -53214971 + L1PA7 LINE L1 2692 6153 -1 433 305 92 6 chr18 32774058 32774222 -53214712 - MIR SINE MIR -26 236 59 1230 260 87 30 chr18 32774723 32775162 -53213772 + LTR16B LTR ERVL 1 464 0 404 196 33 11 chr18 32775615 32775707 -53213227 - MIR SINE MIR -92 170 77 2178 133 67 48 chr18 32776435 32776855 -53212079 - MSTA LTR MaLR 0 428 1 2355 110 0 0 chr18 32777177 32777486 -53211448 + AluSg SINE Alu 1 309 -1 22 0 0 0 chr18 32777602 32777624 -53211310 + AT_rich Low_complexity Low_complexity 1 22 0 1383 288 93 52 chr18 32777848 32779390 -53209544 - L1MCc LINE L1 -4022 3100 1284 1449 154 31 0 chr18 32779639 32779899 -53209035 - AluJb SINE Alu 0 315 49 3291 226 46 1 chr18 32782042 32782803 -53206131 - L1M2b LINE L1 -5225 1984 1190 982 222 120 53 chr18 32783337 32783679 -53205255 + MLT1A1 LTR MaLR 1 365 0 180 77 0 0 chr18 32785689 32785715 -53203219 + (TA)n Simple_repeat Simple_repeat 2 27 0 1363 205 67 32 chr18 32787682 32787965 -53200969 + AluJo SINE Alu 1 293 -19 648 282 88 34 chr18 32788766 32789348 -53199586 + L1MC5 LINE L1 7299 7911 -50 613 328 36 24 chr18 32790256 32790509 -53198425 - MIR SINE MIR -5 257 2 324 276 167 26 chr18 32791260 32791416 -53197518 - MIR SINE MIR -76 186 9 432 288 27 0 chr18 32791990 32792101 -53196833 - MIR3 SINE MIR -10 198 85 650 291 122 0 chr18 32794441 32794671 -53194263 + MIR SINE MIR 5 262 0 1859 106 0 65 chr18 32798610 32798903 -53190031 - AluSg SINE Alu -3 307 34 37 52 0 0 chr18 32799319 32799377 -53189557 + AT_rich Low_complexity Low_complexity 1 58 0 183 42 0 0 chr18 32800261 32800285 -53188649 + (CAA)n Simple_repeat Simple_repeat 2 25 0 524 196 0 0 chr18 32800333 32800425 -53188509 - L1MC1 LINE L1 -18 6315 6224 2949 284 246 17 chr18 32800927 32802824 -53186110 - L2 LINE L2 -2 3311 962 629 324 85 65 chr18 32802826 32803055 -53185879 - L2 LINE L2 -2712 602 379 2056 112 4 0 chr18 32803055 32803331 -53185603 + AluSx SINE Alu 1 277 -35 213 39 0 0 chr18 32803334 32803360 -53185574 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 629 324 85 65 chr18 32803360 32803574 -53185360 - L2 LINE L2 -2936 378 146 753 213 44 0 chr18 32804006 32804142 -53184792 + FRAM SINE Alu 2 143 -33 629 292 50 12 chr18 32805312 32805552 -53183382 + MIR SINE MIR 1 249 -13 358 252 143 24 chr18 32805623 32805833 -53183101 + LTR16A1 LTR ERVL 1 235 -222 333 0 0 0 chr18 32805985 32806022 -53182912 + (CA)n Simple_repeat Simple_repeat 2 38 0 * 342 0 0 0 chr18 32806021 32806059 -53182875 + (GA)n Simple_repeat Simple_repeat 2 39 0 261 0 0 0 chr18 32806576 32806605 -53182329 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 211 205 0 0 chr18 32811837 32811876 -53177058 - MIR SINE MIR 0 262 224 351 305 59 43 chr18 32812053 32812240 -53176694 - MIR SINE MIR -71 191 2 226 183 0 84 chr18 32813138 32813209 -53175725 - L1MC1 LINE L1 -1884 5924 5860 693 278 140 24 chr18 32813217 32813631 -53175303 - L2 LINE L2 -1 3312 2851 618 282 34 34 chr18 32813771 32813980 -53174954 - L2 LINE L2 -1 3312 3104 819 340 70 5 chr18 32814026 32814414 -53174520 - L2 LINE L2 -378 2936 2524 363 288 45 8 chr18 32814417 32814549 -53174385 - L1MC1 LINE L1 -2086 5722 5586 319 278 38 53 chr18 32814559 32814692 -53174242 - L1MC1 LINE L1 -2329 5479 5349 22 0 0 0 chr18 32814951 32814973 -53173961 + AT_rich Low_complexity Low_complexity 1 22 0 31 44 0 0 chr18 32815165 32815210 -53173724 + AT_rich Low_complexity Low_complexity 1 45 0 242 287 178 10 chr18 32815710 32815811 -53173123 + L2 LINE L2 3122 3239 -33 233 336 103 13 chr18 32816721 32816953 -53171981 + L3b LINE CR1 1134 1386 -197 2197 113 3 0 chr18 32817050 32817343 -53171591 + AluSx SINE Alu 1 294 -18 282 346 107 48 chr18 32817361 32817670 -53171264 - L2 LINE L2 0 3272 2946 338 185 15 0 chr18 32817673 32817738 -53171196 - L2 LINE L2 -8 3264 3199 1370 110 40 0 chr18 32817801 32818028 -53170906 + L1MA5A LINE L1 6062 6297 0 2051 142 7 0 chr18 32818050 32818346 -53170588 + AluSx SINE Alu 1 298 -14 2947 181 25 5 chr18 32819992 32820543 -53168391 + MER68 LTR ERV1 1 562 0 1047 312 118 6 chr18 32821567 32822062 -53166872 + L2 LINE L2 2616 3198 -115 1469 176 0 4 chr18 32822062 32822300 -53166634 - AluJo SINE Alu -16 296 60 1047 312 118 6 chr18 32822300 32822429 -53166505 + L2 LINE L2 3198 3311 -2 330 206 31 62 chr18 32822666 32822763 -53166171 + MIR SINE MIR 117 210 -52 195 306 134 25 chr18 32823484 32823641 -53165293 - L2 LINE L2 -428 2886 2713 778 326 105 18 chr18 32824295 32824629 -53164305 + L2 LINE L2 949 1311 -2003 1111 195 5 0 chr18 32824634 32824839 -53164095 + MER58A DNA MER1_type 19 224 0 2658 284 62 5 chr18 32824839 32825662 -53163272 + L2 LINE L2 1304 2173 -1141 729 176 78 0 chr18 32825668 32825821 -53163113 + MER58A DNA MER1_type 48 212 -12 525 247 77 6 chr18 32825865 32826035 -53162899 + L2 LINE L2 2306 2487 -827 816 134 0 16 chr18 32826085 32826212 -53162722 + FLAM_C SINE Alu 4 128 -5 385 280 78 26 chr18 32826269 32826537 -53162397 - L1ME4a LINE L1 -214 5907 5626 21 36 0 0 chr18 32828810 32828838 -53160096 + AT_rich Low_complexity Low_complexity 1 28 0 2181 104 0 13 chr18 32829030 32829328 -53159606 - AluSq SINE Alu -19 294 1 271 174 0 0 chr18 32830380 32830426 -53158508 - L2 LINE L2 -4 3309 3264 358 386 97 10 chr18 32830566 32830856 -53158078 + L2 LINE L2 2475 2789 -525 2396 93 3 0 chr18 32831557 32831857 -53157077 - AluSp SINE Alu -12 301 1 2442 96 31 8 chr18 32834505 32834861 -53154073 + THE1B LTR MaLR 1 364 0 1578 209 26 0 chr18 32835290 32835592 -53153342 + AluJo SINE Alu 1 310 -2 371 210 179 61 chr18 32835909 32836138 -53152796 + LTR33 LTR ERVL 4 259 -262 276 267 10 50 chr18 32836204 32836305 -53152629 - MIR SINE MIR -59 203 107 412 266 37 45 chr18 32836723 32836933 -53152001 + MIR SINE MIR 10 212 -50 383 324 160 0 chr18 32837084 32837303 -53151631 + MIR SINE MIR 1 254 -8 307 354 99 33 chr18 32837344 32837587 -53151347 + MIR SINE MIR 3 261 -1 1823 152 0 48 chr18 32837630 32837939 -53150995 - AluJo SINE Alu -18 294 1 181 244 89 78 chr18 32838223 32838313 -53150621 - L2 LINE L2 -27 3245 3155 725 295 34 5 chr18 32838392 32838599 -53150335 + MIR SINE MIR 2 214 -48 1300 173 9 18 chr18 32838694 32838920 -53150014 + MER58A DNA MER1_type 1 224 0 2221 89 10 0 chr18 32838951 32839278 -53149656 + AluSx SINE Alu 1 330 0 779 264 35 20 chr18 32840865 32841066 -53147868 + MIR SINE MIR 13 216 -46 633 159 43 7 chr18 32841105 32841243 -53147691 + MLT1C LTR MaLR 1 143 -324 1010 200 32 67 chr18 32841357 32841672 -53147262 + MLT1C LTR MaLR 163 466 -1 685 235 82 20 chr18 32841901 32842097 -53146837 - MER3 DNA MER1_type 0 209 2 356 184 11 23 chr18 32842194 32842281 -53146653 - MLT1C LTR MaLR -314 153 68 547 204 48 7 chr18 32842310 32842457 -53146477 - MLT1C LTR MaLR -314 153 1 2022 87 38 0 chr18 32843963 32844252 -53144682 + L1PA14 LINE L1 5862 6161 0 232 225 28 0 chr18 32844316 32844387 -53144547 + (TA)n Simple_repeat Simple_repeat 1 73 0 2258 113 0 10 chr18 32844547 32844856 -53144078 + AluSx SINE Alu 1 306 -6 768 298 146 6 chr18 32845057 32845393 -53143541 + MLT1I LTR MaLR 27 409 0 398 53 18 0 chr18 32845969 32846026 -53142908 + (GA)n Simple_repeat Simple_repeat 1 58 0 765 251 139 48 chr18 32846752 32847127 -53141807 + MLT1I LTR MaLR 1 409 0 485 311 66 31 chr18 32847270 32847498 -53141436 - MIR SINE MIR -6 256 21 271 306 0 24 chr18 32847889 32847974 -53140960 + MIR SINE MIR 34 116 -92 591 298 117 49 chr18 32847978 32848489 -53140445 + L2 LINE L2 2762 3312 -1 215 177 81 32 chr18 32848496 32848558 -53140376 + MIR3 SINE MIR 135 199 -9 300 420 36 9 chr18 32849223 32849447 -53139487 + L2 LINE L2 2804 3033 -239 270 0 0 0 chr18 32852255 32852285 -53136649 + (CA)n Simple_repeat Simple_repeat 1 30 0 374 163 250 0 chr18 32852790 32852882 -53136052 - MER94 DNA DNA 0 134 20 201 147 0 0 chr18 32854497 32854531 -53134403 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 21 57 0 0 chr18 32856746 32856781 -53132153 + AT_rich Low_complexity Low_complexity 1 35 0 2290 106 0 7 chr18 32856805 32857107 -53131827 + AluSq SINE Alu 1 300 -13 1239 125 0 0 chr18 32857107 32857267 -53131667 + AluSp SINE Alu 134 293 -20 214 261 87 0 chr18 32858030 32858099 -53130835 - MIR SINE MIR -64 198 124 200 261 0 0 chr18 32858987 32859033 -53129901 + (CGTG)n Simple_repeat Simple_repeat 4 49 0 225 262 0 33 chr18 32859369 32859420 -53129514 - L3 LINE CR1 -3 1574 1526 281 307 52 100 chr18 32859420 32859605 -53129329 - MER5B DNA MER1_type -2 187 1 3394 101 16 22 chr18 32859803 32860299 -53128635 - MER1A DNA MER1_type 0 529 37 252 326 31 57 chr18 32860312 32860505 -53128429 - L3 LINE CR1 -566 1011 824 369 289 7 59 chr18 32860552 32860687 -53128247 - L2 LINE L2 0 3272 3145 1296 176 69 21 chr18 32860820 32860973 -53127961 - AluSx SINE Alu -8 304 160 2162 65 51 7 chr18 32860973 32861266 -53127668 - AluY SINE Alu -5 306 1 1296 176 69 21 chr18 32861266 32861402 -53127532 - AluSx SINE Alu -152 160 1 351 223 0 83 chr18 32861402 32861523 -53127411 + MIR SINE MIR 112 222 -40 261 261 101 42 chr18 32861584 32861703 -53127231 - L3 LINE CR1 -816 761 636 415 229 166 16 chr18 32861935 32862081 -53126853 + MIR SINE MIR 28 191 -63 1377 176 85 88 chr18 32862471 32862846 -53126088 - MLT1A2 LTR MaLR 0 374 1 263 214 20 92 chr18 32863984 32864082 -53124852 - MIR SINE MIR -80 182 92 268 200 0 0 chr18 32864382 32864432 -53124502 + L2 LINE L2 3263 3312 -1 2132 133 0 0 chr18 32864465 32864765 -53124169 + AluSx SINE Alu 8 307 -5 267 216 45 45 chr18 32865226 32865337 -53123597 + MER113 DNA MER1_type? 1 111 -410 853 10 0 0 chr18 32865393 32865490 -53123444 - AluYa5/8 SINE Alu -7 304 208 307 240 39 77 chr18 32865522 32865570 -53123364 - MER5B DNA MER1_type -75 103 55 369 0 0 0 chr18 32865570 32865611 -53123323 + (TG)n Simple_repeat Simple_repeat 2 42 0 307 240 39 77 chr18 32865611 32865666 -53123268 - MER5B DNA MER1_type -123 55 4 204 294 44 0 chr18 32865879 32865947 -53122987 + MIR SINE MIR 33 103 -105 217 231 0 0 chr18 32865995 32866047 -53122887 + CT-rich Low_complexity Low_complexity 5 56 0 436 327 6 31 chr18 32868263 32868276 -53120658 + MER5A DNA MER1_type 4 12 -177 316 300 41 71 chr18 32868276 32868446 -53120488 - MER5A DNA MER1_type -2 187 23 1468 172 52 47 chr18 32868646 32868989 -53119945 + MLT1B LTR MaLR 1 345 -45 198 0 0 0 chr18 32869018 32869040 -53119894 + (CA)n Simple_repeat Simple_repeat 1 22 0 270 200 0 53 chr18 32870628 32870703 -53118231 + L1MB8 LINE L1 5281 5351 -823 1037 167 6 0 chr18 32870731 32870899 -53118035 - FRAM SINE Alu -6 170 2 3959 143 39 53 chr18 32870899 32871740 -53117194 + L1MB8 LINE L1 5341 6169 -9 483 295 79 31 chr18 32872050 32872277 -53116657 - MIR SINE MIR -16 246 9 212 0 0 35 chr18 32872311 32872340 -53116594 + (TC)n Simple_repeat Simple_repeat 1 28 0 378 115 0 0 chr18 32872942 32873003 -53115931 + (CA)n Simple_repeat Simple_repeat 2 62 0 21 0 0 0 chr18 32874008 32874029 -53114905 + AT_rich Low_complexity Low_complexity 1 21 0 387 327 33 113 chr18 32874029 32874420 -53114514 + L2 LINE L2 2896 3255 -17 293 189 0 0 chr18 32876128 32876181 -53112753 + MIR SINE MIR 91 143 -119 295 217 133 48 chr18 32877067 32877143 -53111791 + L2 LINE L2 3182 3267 -46 1209 234 48 24 chr18 32877143 32877476 -53111458 + MER58B DNA MER1_type 1 341 0 583 227 187 25 chr18 32877637 32877835 -53111099 + MIR SINE MIR 6 235 -27 1066 149 0 10 chr18 32879039 32879240 -53109694 - L1MA7 LINE L1 -75 6216 6018 378 0 0 0 chr18 32881004 32881046 -53107888 + (CA)n Simple_repeat Simple_repeat 2 43 0 259 307 0 0 chr18 32882165 32882240 -53106694 + C-rich Low_complexity Low_complexity 2 76 0 213 139 0 0 chr18 32882913 32882956 -53105978 + (CTG)n Simple_repeat Simple_repeat 1 43 0 301 270 0 0 chr18 32883257 32883346 -53105588 + G-rich Low_complexity Low_complexity 5 93 0 264 91 0 0 chr18 32884698 32884742 -53104192 + (CCCG)n Simple_repeat Simple_repeat 1 44 0 251 114 23 0 chr18 32885479 32885523 -53103411 + GA-rich Low_complexity Low_complexity 1 45 0 263 93 23 0 chr18 32885823 32885866 -53103068 + (TC)n Simple_repeat Simple_repeat 2 45 0 198 0 0 0 chr18 32886540 32886562 -53102372 + (T)n Simple_repeat Simple_repeat 1 22 0 23 0 0 0 chr18 32888505 32888528 -53100406 + AT_rich Low_complexity Low_complexity 1 23 0 209 314 136 17 chr18 32888992 32889110 -53099824 - MIR SINE MIR -94 168 37 259 337 10 10 chr18 32889497 32889595 -53099339 - MIR SINE MIR 0 262 165 1617 227 154 4 chr18 32889608 32890061 -53098873 + MLT1H LTR MaLR 12 532 -17 460 316 72 0 chr18 32890076 32890228 -53098706 - MIR SINE MIR -98 164 2 519 305 30 0 chr18 32890279 32890410 -53098524 - L2 LINE L2 0 3313 3179 258 331 47 24 chr18 32890592 32890719 -53098215 + L2 LINE L2 3175 3304 -9 866 239 44 9 chr18 32891060 32891286 -53097648 + MIR SINE MIR 24 257 -5 258 294 202 8 chr18 32892056 32892175 -53096759 + MIR3 SINE MIR 8 149 -59 4473 178 38 96 chr18 32893942 32894690 -53094244 - L1MC3 LINE L1 -2 7783 6993 288 0 0 0 chr18 32894690 32894722 -53094212 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 4473 178 38 96 chr18 32894722 32894993 -53093941 - L1MC3 LINE L1 -792 6993 6858 1012 103 0 27 chr18 32894993 32895177 -53093757 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 4473 178 38 96 chr18 32895177 32895495 -53093439 - L1MC3 LINE L1 -927 6858 6523 26 50 0 0 chr18 32896145 32896185 -53092749 + AT_rich Low_complexity Low_complexity 1 40 0 321 283 208 52 chr18 32896229 32896441 -53092493 + MIR SINE MIR 6 250 -12 230 265 78 49 chr18 32896474 32896576 -53092358 + MIR3 SINE MIR 97 201 -7 1167 244 133 20 chr18 32896755 32897107 -53091827 + MER69 DNA AcHobo 42 433 -793 24 0 0 0 chr18 32897150 32897174 -53091760 + AT_rich Low_complexity Low_complexity 1 24 0 1136 200 67 16 chr18 32897174 32897352 -53091582 - AluJb SINE Alu -1 311 115 180 0 0 0 chr18 32897352 32897372 -53091562 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1136 200 67 16 chr18 32897372 32897448 -53091486 - AluJb SINE Alu -197 115 44 778 213 42 8 chr18 32897448 32897687 -53091247 + MER69 DNA AcHobo 2142 2388 -138 2375 33 0 4 chr18 32898168 32898444 -53090490 - AluY SINE Alu 0 311 37 186 285 100 31 chr18 32898602 32898732 -53090202 + L2 LINE L2 2178 2316 -998 224 109 0 43 chr18 32898912 32898958 -53089976 + (TATATG)n Simple_repeat Simple_repeat 3 46 0 289 281 288 7 chr18 32901199 32901345 -53087589 + MER5A DNA MER1_type 1 187 -2 653 307 107 30 chr18 32901431 32901832 -53087102 + MLT1J LTR MaLR 3 434 -77 23 0 0 0 chr18 32902693 32902716 -53086218 + AT_rich Low_complexity Low_complexity 1 23 0 958 185 62 0 chr18 32902755 32902933 -53086001 + MER5A DNA MER1_type 1 189 0 27 81 0 0 chr18 32903807 32903869 -53085065 + AT_rich Low_complexity Low_complexity 1 62 0 542 358 50 4 chr18 32904187 32904427 -53084507 + MIR SINE MIR 12 262 0 9179 134 37 11 chr18 32904504 32905675 -53083259 - Tigger2 DNA MER2_type 0 2718 1579 2198 65 14 0 chr18 32905675 32905952 -53082982 + AluSp SINE Alu 1 281 -32 192 40 0 0 chr18 32905952 32905977 -53082957 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 9179 134 37 11 chr18 32905977 32906349 -53082585 - Tigger2 DNA MER2_type -1138 1580 1134 1254 157 102 56 chr18 32906367 32906672 -53082262 - L1PA12 LINE L1 -3 6165 5847 1762 129 39 36 chr18 32906673 32907007 -53081927 - Tigger2 DNA MER2_type -1565 1153 819 2681 147 14 41 chr18 32907007 32907660 -53081274 + pTR5 LTR ERV1 743 1377 -1061 450 51 0 0 chr18 32907658 32907717 -53081217 + pTR5 LTR ERV1 334 392 -2046 * 3486 181 79 13 chr18 32907717 32908478 -53080456 - Tigger2 DNA MER2_type -1896 822 12 11106 85 4 9 chr18 32908479 32910120 -53078814 + L1P LINE L1 3496 5128 -1018 2442 87 0 0 chr18 32910217 32910528 -53078406 + AluY SINE Alu 1 311 0 180 278 133 78 chr18 32910560 32910650 -53078284 - L2 LINE L2 -20 3252 3158 5214 206 58 19 chr18 32910941 32912339 -53076595 + Charlie1a DNA MER1_type 3 1454 -1 251 188 0 14 chr18 32912764 32912833 -53076101 + (TA)n Simple_repeat Simple_repeat 2 69 0 600 259 86 36 chr18 32913516 32913736 -53075198 + MIR SINE MIR 20 250 -12 240 35 0 0 chr18 32913923 32913952 -53074982 + (CAA)n Simple_repeat Simple_repeat 2 30 0 24 0 0 0 chr18 32914246 32914270 -53074664 + AT_rich Low_complexity Low_complexity 1 24 0 253 288 112 32 chr18 32916720 32916845 -53072089 - L2 LINE L2 0 3313 3179 414 297 25 0 chr18 32917718 32917836 -53071098 + MIR SINE MIR 49 169 -93 1538 214 24 0 chr18 32918024 32918313 -53070621 - AluJo SINE Alu -13 299 4 604 256 68 64 chr18 32919767 32920017 -53068917 + MIR SINE MIR 12 262 0 257 234 0 31 chr18 32920023 32920087 -53068847 + L2 LINE L2 3237 3298 -15 272 315 118 0 chr18 32920503 32920630 -53068304 - MIR3 SINE MIR -59 149 8 238 370 31 0 chr18 32920906 32921033 -53067901 + L2 LINE L2 3183 3313 0 2151 123 0 13 chr18 32922373 32922682 -53066252 + AluY SINE Alu 1 305 -6 1593 188 94 30 chr18 32922997 32923369 -53065565 - MSTD LTR MaLR 0 396 1 268 192 172 0 chr18 32925099 32925250 -53063684 + (CTAGGG)n Simple_repeat Simple_repeat 3 179 0 * 375 339 0 11 chr18 32925141 32925321 -53063613 + (TAG)n Simple_repeat Simple_repeat 1 178 0 766 249 30 0 chr18 32925743 32925912 -53063022 - MIR SINE MIR -74 188 15 22 56 0 0 chr18 32926084 32926120 -53062814 + AT_rich Low_complexity Low_complexity 1 36 0 245 378 24 16 chr18 32926617 32926744 -53062190 - MER91A DNA MER1_type -12 184 57 184 226 129 43 chr18 32927467 32927560 -53061374 - L2 LINE L2 -92 3221 3121 2384 104 0 0 chr18 32927571 32927878 -53061056 + AluSq SINE Alu 1 307 -6 313 284 31 74 chr18 32929172 32929401 -53059533 + L1ME LINE L1 543 761 -5309 2659 255 87 88 chr18 32929427 32929878 -53059056 + L1ME LINE L1 2249 2699 -3405 1767 184 30 0 chr18 32929878 32930210 -53058724 - MER2 DNA MER2_type -2 342 1 2659 255 87 88 chr18 32930210 32932489 -53056445 + L1ME LINE L1 2699 4978 -1126 939 212 9 36 chr18 32932489 32932711 -53056223 + MER20 DNA MER1_type 1 216 -3 2659 255 87 88 chr18 32932711 32932942 -53055992 + L1ME LINE L1 4978 5208 -896 348 24 0 0 chr18 32932942 32932983 -53055951 + (TA)n Simple_repeat Simple_repeat 2 42 0 2659 255 87 88 chr18 32932983 32933400 -53055534 + L1ME LINE L1 5208 5625 -479 1321 217 99 28 chr18 32933471 32933964 -53054970 + L1ME3A LINE L1 5639 6162 -8 1209 193 33 4 chr18 32934040 32934283 -53054651 + L1PB4 LINE L1 5900 6149 -7 28 79 0 0 chr18 32934288 32934351 -53054583 + AT_rich Low_complexity Low_complexity 1 63 0 2004 130 3 3 chr18 32934795 32935095 -53053839 - AluSq SINE Alu -13 300 1 1228 216 61 15 chr18 32935555 32935883 -53053051 + MER2 DNA MER2_type 1 343 -1 297 222 83 125 chr18 32936872 32937016 -53051918 + L2 LINE L2 3171 3308 -5 429 264 113 13 chr18 32937379 32937538 -53051396 + MER5A DNA MER1_type 14 188 -1 673 152 9 0 chr18 32938014 32938126 -53050808 + FLAM_A SINE Alu 27 139 -3 203 184 0 0 chr18 32939439 32939477 -53049457 + T-rich Low_complexity Low_complexity 1 38 0 2075 142 0 3 chr18 32940722 32941024 -53047910 + AluSx SINE Alu 1 301 -11 308 298 0 21 chr18 32941057 32941151 -53047783 + L1MC4 LINE L1 6614 6705 -1337 21 0 0 0 chr18 32941216 32941237 -53047697 + AT_rich Low_complexity Low_complexity 1 21 0 1326 116 19 0 chr18 32941618 32941929 -53047005 - LTR47A LTR ERVL 0 452 89 711 187 25 17 chr18 32941939 32942110 -53046824 - MLT1F1 LTR MaLR -371 184 3 222 118 0 0 chr18 32942250 32942284 -53046650 + (TG)n Simple_repeat Simple_repeat 1 34 0 324 70 0 0 chr18 32943038 32943081 -53045853 + (TG)n Simple_repeat Simple_repeat 2 44 0 1082 163 0 0 chr18 32943084 32943244 -53045690 - AluJb SINE Alu -22 290 131 306 0 0 0 chr18 32944949 32944983 -53043951 + (TG)n Simple_repeat Simple_repeat 2 35 0 22 0 0 0 chr18 32945211 32945233 -53043701 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr18 32945285 32945306 -53043628 + (T)n Simple_repeat Simple_repeat 1 21 0 259 307 0 0 chr18 32945745 32945820 -53043114 + C-rich Low_complexity Low_complexity 2 76 0 213 139 0 0 chr18 32946493 32946536 -53042398 + (CTG)n Simple_repeat Simple_repeat 1 43 0 301 270 0 0 chr18 32946837 32946926 -53042008 + G-rich Low_complexity Low_complexity 5 93 0 2558 46 0 3 chr18 32947373 32947678 -53041256 - AluY SINE Alu -7 304 1 786 269 24 12 chr18 32948334 32948587 -53040347 + MIR SINE MIR 7 262 0 219 244 89 49 chr18 32948633 32948756 -53040178 - L2 LINE L2 0 3313 3186 312 348 71 11 chr18 32949095 32949279 -53039655 + MIR SINE MIR 20 214 -48 1785 296 81 29 chr18 32949555 32950160 -53038774 - L2 LINE L2 -351 2963 2316 1825 132 82 28 chr18 32950160 32950329 -53038605 - THE1C LTR MaLR 0 375 216 279 0 0 0 chr18 32950329 32950360 -53038574 + (GA)n Simple_repeat Simple_repeat 1 31 0 1825 132 82 28 chr18 32950360 32950546 -53038388 - THE1C LTR MaLR -159 216 1 1785 296 81 29 chr18 32950546 32950636 -53038298 - L2 LINE L2 -998 2316 2232 669 291 35 44 chr18 32951499 32951929 -53037005 + LTR16B LTR ERVL 34 459 -5 445 276 105 28 chr18 32952669 32952850 -53036084 + MIR3 SINE MIR 11 205 -3 21 71 0 0 chr18 32953416 32953458 -53035476 + AT_rich Low_complexity Low_complexity 1 42 0 319 268 157 33 chr18 32953884 32954037 -53034897 - MIR SINE MIR -78 184 13 272 325 12 0 chr18 32954170 32954253 -53034681 + MIR SINE MIR 30 113 -149 215 152 22 0 chr18 32954597 32954643 -53034291 + GA-rich Low_complexity Low_complexity 3 49 0 239 260 89 41 chr18 32955190 32955313 -53033621 - MIR SINE MIR -48 214 86 601 285 107 26 chr18 32956373 32956878 -53032056 - L1ME4a LINE L1 -29 6092 5547 2781 198 38 24 chr18 32957411 32958036 -53030898 - LTR27 LTR ERV1 0 636 3 212 0 0 35 chr18 32958842 32958871 -53030063 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1875 174 0 0 chr18 32958875 32959156 -53029778 - AluSx SINE Alu -31 281 1 359 302 38 31 chr18 32959226 32959385 -53029549 - MIR SINE MIR 0 262 103 210 241 19 0 chr18 32960133 32960187 -53028747 + MIR SINE MIR 160 214 -48 184 163 47 0 chr18 32960696 32960739 -53028195 - MIR3 SINE MIR 0 208 164 237 311 39 0 chr18 32961276 32961379 -53027555 + MIR SINE MIR 118 224 -38 785 297 0 5 chr18 32963845 32964067 -53024867 + MIR SINE MIR 12 232 -30 4000 219 47 6 chr18 32964161 32965193 -53023741 + L1MB7 LINE L1 3762 4835 -1311 1736 208 69 37 chr18 32965200 32965710 -53023224 + L1MB7 LINE L1 5327 5852 -332 1231 184 18 63 chr18 32965840 32966027 -53022907 + L1MB7 LINE L1 5860 6027 -157 1964 130 0 67 chr18 32966027 32966357 -53022577 - AluSx SINE Alu -4 308 1 1231 184 18 63 chr18 32966357 32966500 -53022434 + L1MB7 LINE L1 6027 6175 -9 23 0 0 0 chr18 32967014 32967037 -53021897 + AT_rich Low_complexity Low_complexity 1 23 0 234 91 0 0 chr18 32968071 32968104 -53020830 + (CCAA)n Simple_repeat Simple_repeat 2 34 0 268 273 61 69 chr18 32968248 32968479 -53020455 + HAL1 LINE L1 1119 1347 -1160 263 296 118 77 chr18 32968552 32969147 -53019787 + HAL1 LINE L1 1549 2167 -340 266 0 29 0 chr18 32969919 32969953 -53018981 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2064 117 7 3 chr18 32970409 32970717 -53018217 - AluSx SINE Alu 0 309 1 710 296 34 5 chr18 32970912 32971118 -53017816 - MIR SINE MIR -17 245 34 21 0 0 0 chr18 32971203 32971224 -53017710 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr18 32971334 32971356 -53017578 + AT_rich Low_complexity Low_complexity 1 22 0 41012 32 21 1 chr18 32971356 32977388 -53011546 - L1PA2 LINE L1 0 6155 1 2296 99 0 13 chr18 32977416 32977910 -53011024 - AluY SINE Alu 0 311 3 317 302 11 22 chr18 32978008 32978190 -53010744 + (TA)n Simple_repeat Simple_repeat 1 180 0 22 0 0 0 chr18 32978194 32978216 -53010718 + AT_rich Low_complexity Low_complexity 1 22 0 1399 158 82 51 chr18 32978854 32979208 -53009726 + MLT1A1 LTR MaLR 1 365 0 1340 234 123 31 chr18 32979444 32979951 -53008983 + L2 LINE L2 2761 3310 -3 276 355 138 0 chr18 32980978 32981116 -53007818 + MIR SINE MIR 10 166 -96 198 143 0 0 chr18 32982555 32982590 -53006344 + (TG)n Simple_repeat Simple_repeat 2 36 0 459 221 20 133 chr18 32985662 32985857 -53003077 - MER5B DNA MER1_type -1 177 5 851 146 0 53 chr18 32986981 32987132 -53001802 + FRAM SINE Alu 1 40 0 387 0 0 0 chr18 32987152 32987195 -53001739 + (CA)n Simple_repeat Simple_repeat 2 44 0 469 316 105 66 chr18 32987201 32987666 -53001268 + L2 LINE L2 2136 2628 -686 2082 187 129 7 chr18 32987666 32988116 -53000818 + MLT1D LTR MaLR 1 505 0 469 316 105 66 chr18 32988116 32988214 -53000720 + L2 LINE L2 2628 2721 -593 1847 139 4 0 chr18 32988817 32989114 -52999820 + AluSp SINE Alu 27 324 0 1641 168 25 0 chr18 32989179 32989453 -52999481 + AluJb SINE Alu 27 307 -5 2081 120 33 0 chr18 32989596 32989896 -52999038 - AluSx SINE Alu -2 310 1 2275 109 0 3 chr18 32990153 32990455 -52998479 - AluSx SINE Alu -11 301 1 273 122 41 0 chr18 32991816 32991865 -52997069 + MER94 DNA DNA 2 52 -82 954 228 0 0 chr18 32992247 32992466 -52996468 + L1PB4 LINE L1 5936 6154 -2 269 283 304 7 chr18 32993149 32993287 -52995647 - MER5A DNA MER1_type -1 188 10 598 162 17 0 chr18 32994058 32994175 -52994759 + L1MA8 LINE L1 6173 6291 0 484 333 32 16 chr18 32995660 32995846 -52993088 - MIR SINE MIR -54 208 20 1940 97 0 74 chr18 32996771 32997070 -52991864 - AluSc SINE Alu -32 277 1 193 382 0 0 chr18 32997732 32997808 -52991126 - L2 LINE L2 -3 3310 3235 238 297 109 10 chr18 32998317 32998418 -52990516 + L2 LINE L2 3201 3311 -2 288 257 179 14 chr18 32998467 32998607 -52990327 + MLT1H LTR MaLR 39 201 -348 359 323 68 25 chr18 32999051 32999283 -52989651 + MIR SINE MIR 26 262 0 2174 176 78 5 chr18 32999519 32999916 -52989018 + MSTB LTR MaLR 1 426 0 8395 184 49 3 chr18 32999916 33001494 -52987440 + MSTB-int LTR MaLR 1 1651 0 1028 162 30 5 chr18 33001494 33001691 -52987243 + MSTB LTR MaLR 1 202 -224 2012 148 24 3 chr18 33001691 33001988 -52986946 + AluSx SINE Alu 1 303 -9 1110 197 34 8 chr18 33002178 33002412 -52986522 + MSTB LTR MaLR 185 424 -2 510 324 46 37 chr18 33002449 33002690 -52986244 + MIR SINE MIR 20 262 0 227 354 52 49 chr18 33003699 33004004 -52984930 - LTR16C LTR ERVL -96 395 90 216 0 0 0 chr18 33004421 33004445 -52984489 + (CA)n Simple_repeat Simple_repeat 2 25 0 1013 100 0 0 chr18 33004649 33004799 -52984135 + L1MA4 LINE L1 6143 6292 -8 262 268 94 27 chr18 33005326 33005494 -52983440 - MLT1J1 LTR MaLR -23 423 250 463 277 66 0 chr18 33005529 33005695 -52983239 - MLT1J1 LTR MaLR -267 179 3 1401 230 50 21 chr18 33006391 33006770 -52982164 - MLT1B LTR MaLR 0 390 1 2260 88 0 14 chr18 33007296 33007591 -52981343 - AluSx SINE Alu -21 291 1 261 0 0 0 chr18 33007982 33008011 -52980923 + (TG)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr18 33008110 33008131 -52980803 + AT_rich Low_complexity Low_complexity 1 21 0 181 300 150 12 chr18 33008252 33008332 -52980602 - L2 LINE L2 -46 3226 3136 189 175 0 0 chr18 33008955 33008995 -52979939 + (TG)n Simple_repeat Simple_repeat 1 40 0 213 343 156 30 chr18 33010027 33010564 -52978370 + L2 LINE L2 2293 2897 -417 573 371 85 21 chr18 33010597 33011066 -52977868 + L2 LINE L2 2812 3310 -3 1977 102 0 61 chr18 33011736 33012049 -52976885 + AluSg SINE Alu 1 294 -16 460 349 26 5 chr18 33012133 33012328 -52976606 - MIR SINE MIR -10 252 54 225 173 27 27 chr18 33014856 33014931 -52974003 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 325 306 73 124 chr18 33016265 33016733 -52972201 - L2 LINE L2 0 3272 2829 1902 92 17 61 chr18 33016743 33017037 -52971897 + AluSx SINE Alu 32 312 0 2370 85 0 19 chr18 33017138 33017445 -52971489 - AluY SINE Alu -10 301 1 244 308 154 0 chr18 33018370 33018448 -52970486 + L2 LINE L2 3183 3272 0 237 281 169 51 chr18 33022224 33022402 -52966532 + L2 LINE L2 3114 3312 -1 222 136 0 0 chr18 33023044 33023088 -52965846 + (TG)n Simple_repeat Simple_repeat 2 45 0 301 253 116 34 chr18 33023383 33023529 -52965405 + MIR SINE MIR 104 261 -1 667 256 7 7 chr18 33023646 33023783 -52965151 + MIR SINE MIR 13 149 -113 485 317 43 19 chr18 33024241 33024402 -52964532 - MIR SINE MIR -75 187 23 2685 130 19 9 chr18 33025218 33025642 -52963292 + MSTA LTR MaLR 1 428 0 237 33 0 0 chr18 33026550 33026580 -52962354 + (T)n Simple_repeat Simple_repeat 1 30 0 240 35 0 0 chr18 33026688 33026717 -52962217 + (A)n Simple_repeat Simple_repeat 1 29 0 347 344 160 27 chr18 33026910 33027392 -52961542 - L2 LINE L2 -553 2761 2216 202 222 0 0 chr18 33027849 33027885 -52961049 + (CATATA)n Simple_repeat Simple_repeat 3 38 0 204 272 184 19 chr18 33027907 33028010 -52960924 - MIR SINE MIR -120 142 23 203 175 25 0 chr18 33028542 33028582 -52960352 + (ATG)n Simple_repeat Simple_repeat 3 43 0 24 32 0 0 chr18 33029706 33029737 -52959197 + AT_rich Low_complexity Low_complexity 1 31 0 2048 174 17 29 chr18 33032416 33032835 -52956099 - MLT2D LTR ERVL 0 414 1 1939 187 58 70 chr18 33034469 33035025 -52953909 - MER44D DNA MER2_type -1 604 1 463 216 168 0 chr18 33035271 33035415 -52953519 + MER5A DNA MER1_type 5 176 -13 1758 72 4 75 chr18 33035419 33035697 -52953237 + AluY SINE Alu 49 306 -5 183 42 0 0 chr18 33035798 33035822 -52953112 + (A)n Simple_repeat Simple_repeat 1 24 0 318 317 0 0 chr18 33035856 33035938 -52952996 - L3 LINE CR1 -75 1502 1421 278 254 0 0 chr18 33035976 33036039 -52952895 + L2 LINE L2 3251 3313 0 417 347 78 8 chr18 33036108 33036350 -52952584 - L3 LINE CR1 -280 1297 1039 367 309 9 0 chr18 33037228 33037338 -52951596 + LTR33 LTR ERVL 1 111 -410 281 308 19 31 chr18 33037336 33037495 -52951439 + LTR33 LTR ERVL 326 482 -39 * 22 80 0 0 chr18 33037567 33037617 -52951317 + AT_rich Low_complexity Low_complexity 1 50 0 4567 148 9 17 chr18 33037638 33038547 -52950387 - L1MA9 LINE L1 -34 6278 5278 350 312 220 14 chr18 33039306 33039588 -52949346 + L3 LINE CR1 974 1313 -264 246 32 0 0 chr18 33039593 33039624 -52949310 + (TC)n Simple_repeat Simple_repeat 2 32 0 3498 236 86 36 chr18 33039647 33041070 -52947864 + L1ME1 LINE L1 3608 5102 -1044 2548 40 0 0 chr18 33041146 33041443 -52947491 + AluY SINE Alu 1 297 -14 1783 247 22 0 chr18 33041447 33041909 -52947025 + L1ME1 LINE L1 5326 5797 -369 604 233 51 73 chr18 33041911 33042224 -52946710 + L1ME1 LINE L1 5857 6162 -4 338 57 19 0 chr18 33042229 33042282 -52946652 + (GA)n Simple_repeat Simple_repeat 1 54 0 207 186 0 0 chr18 33042343 33042386 -52946548 + CT-rich Low_complexity Low_complexity 2 44 0 252 0 0 0 chr18 33043109 33043137 -52945797 + (TA)n Simple_repeat Simple_repeat 1 28 0 306 0 0 0 chr18 33043689 33043723 -52945211 + (CA)n Simple_repeat Simple_repeat 2 35 0 492 235 0 37 chr18 33044503 33044639 -52944295 - MER94 DNA DNA -2 132 2 259 256 11 33 chr18 33044695 33044785 -52944149 + 7SK RNA RNA 1 88 -105 2561 133 35 12 chr18 33046490 33046912 -52942022 + MSTB1 LTR MaLR 1 432 0 21 36 0 0 chr18 33048670 33048698 -52940236 + AT_rich Low_complexity Low_complexity 1 28 0 195 42 0 0 chr18 33048982 33049006 -52939928 + (T)n Simple_repeat Simple_repeat 1 24 0 2660 23 0 3 chr18 33049131 33049438 -52939496 - AluY SINE Alu -5 306 1 213 242 0 0 chr18 33050598 33050680 -52938254 + CT-rich Low_complexity Low_complexity 2 86 -14 222 37 0 0 chr18 33050680 33050707 -52938227 + (TG)n Simple_repeat Simple_repeat 2 28 0 213 242 0 0 chr18 33050707 33050723 -52938211 + CT-rich Low_complexity Low_complexity 85 100 0 23 0 0 0 chr18 33051945 33051968 -52936966 + AT_rich Low_complexity Low_complexity 1 23 0 240 250 0 16 chr18 33051971 33052035 -52936899 - L2 LINE L2 -82 3231 3169 1137 113 4 100 chr18 33053923 33054152 -52934782 - L1PA13 LINE L1 -5 6158 5952 24 0 0 0 chr18 33054165 33054189 -52934745 + AT_rich Low_complexity Low_complexity 1 24 0 237 243 14 40 chr18 33057393 33057467 -52931467 - L2 LINE L2 -4 3268 3197 182 336 14 64 chr18 33057581 33057721 -52931213 - L2 LINE L2 -150 3122 2990 2080 119 44 39 chr18 33058100 33058461 -52930473 + THE1B LTR MaLR 2 364 0 206 359 58 10 chr18 33059982 33060085 -52928849 + L2 LINE L2 3202 3309 -4 2115 76 0 4 chr18 33060191 33060467 -52928467 - AluY SINE Alu 0 311 37 3519 227 62 26 chr18 33060637 33062048 -52926886 - L1ME LINE L1 -516 5719 4238 * 4639 266 65 29 chr18 33062047 33063995 -52924939 - L1ME LINE L1 -4378 2018 1 237 303 92 8 chr18 33064329 33064448 -52924486 + L2 LINE L2 2197 2325 -989 23 0 0 0 chr18 33064671 33064694 -52924240 + AT_rich Low_complexity Low_complexity 1 23 0 1911 149 67 14 chr18 33064702 33065058 -52923876 - THE1C LTR MaLR 0 375 1 8990 130 25 48 chr18 33065058 33066197 -52922737 - THE1C-int LTR MaLR 0 1580 487 2436 70 3 0 chr18 33066197 33066496 -52922438 - AluY SINE Alu -11 300 1 8990 130 25 48 chr18 33066496 33066925 -52922009 - THE1C-int LTR MaLR -1093 487 49 185 342 135 16 chr18 33068843 33069036 -52919898 + L2 LINE L2 3097 3312 -1 192 77 0 0 chr18 33069047 33069073 -52919861 + (CA)n Simple_repeat Simple_repeat 2 27 0 22 56 0 0 chr18 33069509 33069545 -52919389 + AT_rich Low_complexity Low_complexity 1 36 0 25 31 0 0 chr18 33069709 33069741 -52919193 + AT_rich Low_complexity Low_complexity 1 32 0 235 290 65 11 chr18 33069979 33070072 -52918862 + MIR SINE MIR 85 182 -80 198 0 0 0 chr18 33070321 33070343 -52918591 + (A)n Simple_repeat Simple_repeat 1 22 0 378 298 114 13 chr18 33070420 33070578 -52918356 + L2 LINE L2 3140 3313 0 2841 93 0 5 chr18 33070850 33071227 -52917707 - THE1C LTR MaLR 0 375 1 320 308 133 35 chr18 33071939 33072082 -52916852 + MIR3 SINE MIR 42 198 -10 198 0 0 0 chr18 33072492 33072514 -52916420 + (T)n Simple_repeat Simple_repeat 1 22 0 181 241 11 11 chr18 33122796 33122883 -52866051 + (TCTCTG)n Simple_repeat Simple_repeat 4 90 0 1141 231 16 0 chr18 33123355 33123602 -52865332 + MER66A LTR ERV1 1 251 -227 506 319 123 0 chr18 33125862 33126066 -52862868 - MIR SINE MIR 0 262 34 22 35 0 0 chr18 33127492 33127521 -52861413 + AT_rich Low_complexity Low_complexity 1 29 0 200 280 93 13 chr18 33128096 33128171 -52860763 + MIR3 SINE MIR 118 198 -10 33 25 0 0 chr18 33129549 33129589 -52859345 + AT_rich Low_complexity Low_complexity 1 40 0 5297 236 34 99 chr18 33131360 33133541 -52855393 + L1MA4 LINE L1 7 2045 -4804 3911 181 30 51 chr18 33133537 33134435 -52854499 + L1MA6 LINE L1 5422 6300 0 * 13802 202 46 19 chr18 33134423 33134890 -52854044 + L1MA4 LINE L1 2047 2500 -4502 2552 68 0 0 chr18 33134890 33135197 -52853737 - AluY SINE Alu -4 307 1 13802 202 46 19 chr18 33135197 33136599 -52852335 + L1MA4 LINE L1 2500 3863 -3139 1953 123 43 0 chr18 33136599 33136899 -52852035 + AluSp SINE Alu 1 313 0 13802 202 46 19 chr18 33136899 33139848 -52849086 + L1MA4 LINE L1 3863 6996 -6 398 365 67 29 chr18 33140476 33140922 -52848012 + L3 LINE CR1 247 709 -868 21 0 0 0 chr18 33141243 33141264 -52847670 + AT_rich Low_complexity Low_complexity 1 21 0 202 319 14 0 chr18 33141452 33141521 -52847413 - MIR SINE MIR -27 235 166 33 25 0 0 chr18 33141688 33141728 -52847206 + AT_rich Low_complexity Low_complexity 1 40 0 706 159 0 0 chr18 33141836 33141943 -52846991 - AluSq/x SINE Alu -206 107 1 343 283 136 73 chr18 33142141 33142537 -52846397 - L1ME4a LINE L1 0 6121 5701 507 17 0 0 chr18 33142541 33142601 -52846333 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 465 325 141 15 chr18 33142720 33143202 -52845732 - L2 LINE L2 -36 3277 2734 25 75 0 0 chr18 33143202 33143255 -52845679 + AT_rich Low_complexity Low_complexity 1 53 0 775 248 147 11 chr18 33143258 33143524 -52845410 - L1ME3A LINE L1 -25 6145 5844 1070 288 167 36 chr18 33143532 33144222 -52844712 - L2 LINE L2 -1130 2184 1405 714 210 11 6 chr18 33144421 33144602 -52844332 + L1MA1 LINE L1 6121 6302 0 309 251 81 85 chr18 33144630 33144721 -52844213 - HAL1b LINE L1 -792 556 466 2170 109 0 7 chr18 33144721 33145014 -52843920 + AluSq SINE Alu 1 291 -22 309 251 81 85 chr18 33145014 33145157 -52843777 - HAL1b LINE L1 -882 466 323 1723 172 12 94 chr18 33146344 33146521 -52842413 + MLT1B LTR MaLR 1 191 -199 11136 188 16 0 chr18 33146521 33149470 -52839464 + L1PA14 LINE L1 3194 6161 0 1723 172 12 94 chr18 33149470 33149717 -52839217 + MLT1B LTR MaLR 191 390 0 1807 154 7 7 chr18 33151226 33151519 -52837415 + AluJb SINE Alu 1 293 -19 829 73 0 0 chr18 33151658 33151767 -52837167 + L1PA5 LINE L1 6038 6146 -8 30 59 0 0 chr18 33151767 33151818 -52837116 + AT_rich Low_complexity Low_complexity 1 51 0 758 275 41 12 chr18 33152083 33152325 -52836609 - MIR SINE MIR 0 262 14 298 332 65 19 chr18 33152389 33152603 -52836331 - L1ME4a LINE L1 -502 5619 5396 310 244 118 61 chr18 33152944 33153173 -52835761 - L1ME4a LINE L1 -1128 5018 4777 2243 93 3 3 chr18 33153568 33153870 -52835064 + AluSg SINE Alu 1 302 -8 2577 49 0 0 chr18 33154319 33154627 -52834307 + AluY SINE Alu 1 308 -3 333 250 52 0 chr18 33154637 33154733 -52834201 + MIR SINE MIR 160 260 -2 25 31 0 0 chr18 33154910 33154942 -52833992 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr18 33155312 33155342 -52833592 + AT_rich Low_complexity Low_complexity 1 30 0 405 198 0 0 chr18 33155410 33155496 -52833438 + (TA)n Simple_repeat Simple_repeat 1 86 0 395 233 101 0 chr18 33155592 33155721 -52833213 + MER103 DNA DNA 1 142 -24 221 218 18 18 chr18 33155721 33155780 -52833154 + (CATATA)n Simple_repeat Simple_repeat 1 59 0 712 162 109 114 chr18 33155797 33156007 -52832927 - MER20 DNA MER1_type 0 219 11 405 0 0 0 chr18 33156007 33156052 -52832882 + (CA)n Simple_repeat Simple_repeat 2 46 0 216 0 0 0 chr18 33156071 33156095 -52832839 + (CA)n Simple_repeat Simple_repeat 2 25 0 231 36 0 0 chr18 33156548 33156576 -52832358 + (TG)n Simple_repeat Simple_repeat 2 29 0 333 0 0 0 chr18 33156604 33156641 -52832293 + (TG)n Simple_repeat Simple_repeat 2 38 0 1458 208 73 15 chr18 33157235 33157644 -52831290 - L1ME4a LINE L1 -1394 4752 4320 290 297 60 87 chr18 33157871 33158056 -52830878 + MIR3 SINE MIR 20 199 -9 30 0 0 0 chr18 33158631 33158661 -52830273 + AT_rich Low_complexity Low_complexity 1 30 0 23 78 0 0 chr18 33158807 33158858 -52830076 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr18 33159335 33159358 -52829576 + AT_rich Low_complexity Low_complexity 1 23 0 1759 146 0 0 chr18 33160367 33160634 -52828300 - AluSx SINE Alu -8 304 38 325 243 172 10 chr18 33160851 33160985 -52827949 - MIR SINE MIR -63 145 35 23 54 0 0 chr18 33162495 33162532 -52826402 + AT_rich Low_complexity Low_complexity 1 37 0 351 224 0 0 chr18 33162768 33162844 -52826090 + L1ME LINE L1 5584 5659 -462 21 0 0 0 chr18 33163969 33163990 -52824944 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr18 33164481 33164502 -52824432 + AT_rich Low_complexity Low_complexity 1 21 0 74 12 0 0 chr18 33165308 33165389 -52823545 + AT_rich Low_complexity Low_complexity 1 81 0 330 310 55 0 chr18 33165810 33165955 -52822979 - MIR SINE MIR 0 262 110 1322 273 130 21 chr18 33165962 33166503 -52822431 + MLT1G1 LTR MaLR 1 588 -2 309 278 0 33 chr18 33166510 33166600 -52822334 - MIR SINE MIR -160 102 16 22 70 0 0 chr18 33170065 33170108 -52818826 + AT_rich Low_complexity Low_complexity 1 43 0 50 59 0 0 chr18 33170199 33170284 -52818650 + AT_rich Low_complexity Low_complexity 1 85 0 24 0 0 0 chr18 33171124 33171148 -52817786 + AT_rich Low_complexity Low_complexity 1 24 0 211 250 154 39 chr18 33171159 33171263 -52817671 - MIR SINE MIR -75 133 18 189 0 0 0 chr18 33171409 33171430 -52817504 + (A)n Simple_repeat Simple_repeat 1 21 0 986 235 14 5 chr18 33171790 33172011 -52816923 + MER58A DNA MER1_type 1 223 -1 2230 128 11 6 chr18 33172046 33172399 -52816535 - THE1A LTR MaLR 0 355 1 204 324 10 10 chr18 33173375 33173477 -52815457 + T-rich Low_complexity Low_complexity 3 104 0 181 212 0 0 chr18 33174358 33174391 -52814543 + L2 LINE L2 3265 3297 -16 22 0 0 0 chr18 33174486 33174508 -52814426 + AT_rich Low_complexity Low_complexity 1 22 0 201 121 0 0 chr18 33175286 33175319 -52813615 + (GAAA)n Simple_repeat Simple_repeat 2 34 0 1625 265 83 46 chr18 33175621 33176184 -52812750 + MLT1E2 LTR MaLR 40 623 -3 24 32 0 0 chr18 33176282 33176313 -52812621 + AT_rich Low_complexity Low_complexity 1 31 0 801 156 0 7 chr18 33176384 33176525 -52812409 + Ricksha DNA DNA 1 140 -1906 5059 141 20 10 chr18 33176548 33177428 -52811506 + Ricksha DNA DNA 2350 3238 -8 2082 263 99 35 chr18 33178540 33180333 -52808601 - L1ME3A LINE L1 -72 6098 4194 327 295 39 13 chr18 33180342 33180498 -52808436 - L1ME3A LINE L1 -2143 4003 3844 21 0 0 0 chr18 33181093 33181114 -52807820 + AT_rich Low_complexity Low_complexity 1 21 0 24 77 0 0 chr18 33183677 33183729 -52805205 + AT_rich Low_complexity Low_complexity 1 52 0 2221 219 62 25 chr18 33185375 33185928 -52803006 - MLT1E3 LTR MaLR 0 624 52 201 74 0 0 chr18 33185931 33185958 -52802976 + (TA)n Simple_repeat Simple_repeat 2 28 0 3902 216 37 24 chr18 33186198 33186989 -52801945 + ERVL-C1 LTR ERVL 3591 4395 -1369 1670 34 0 10 chr18 33186989 33187195 -52801739 + L1PA5 LINE L1 5951 6154 0 3902 216 37 24 chr18 33187195 33187249 -52801685 + ERVL-C1 LTR ERVL 4395 4447 -1317 984 218 107 0 chr18 33187240 33187483 -52801451 - ERVL LTR ERVL -479 5285 5017 * 4721 223 56 58 chr18 33187485 33187955 -52800979 + ERVL-C1 LTR ERVL 4460 4929 -835 7457 44 5 0 chr18 33187955 33189658 -52799276 + L1PA5 LINE L1 4440 6154 0 4721 223 56 58 chr18 33189658 33190486 -52798448 + ERVL-C1 LTR ERVL 4929 5756 -8 667 226 67 58 chr18 33190486 33190874 -52798060 + MLT2C1 LTR ERVL 1 389 -75 247 349 0 64 chr18 33191098 33191207 -52797727 + MIR SINE MIR 37 138 -70 1607 195 45 12 chr18 33191255 33191589 -52797345 + MER7A DNA MER2_type 1 343 -3 252 211 278 38 chr18 33195022 33195155 -52793779 - L2 LINE L2 0 3313 3149 318 256 96 56 chr18 33195522 33195647 -52793287 - L2 LINE L2 -625 2689 2560 334 176 50 44 chr18 33195680 33195839 -52793095 + (TATATG)n Simple_repeat Simple_repeat 6 165 0 254 125 42 14 chr18 33195852 33195924 -52793010 + (TA)n Simple_repeat Simple_repeat 1 74 0 1029 197 0 100 chr18 33195956 33196109 -52792825 + MER8 DNA MER2_type 6 173 -66 1861 137 23 3 chr18 33196109 33196415 -52792519 - AluSx SINE Alu 0 312 1 1029 197 0 100 chr18 33196415 33196476 -52792458 + MER8 DNA MER2_type 173 194 -45 225 0 0 0 chr18 33196476 33196501 -52792433 + (CA)n Simple_repeat Simple_repeat 2 26 0 1029 197 0 100 chr18 33196501 33196534 -52792400 + MER8 DNA MER2_type 194 229 -10 2168 119 0 0 chr18 33196891 33197194 -52791740 - AluSg SINE Alu -7 303 1 23 33 0 0 chr18 33199372 33199402 -52789532 + AT_rich Low_complexity Low_complexity 1 30 0 651 262 63 21 chr18 33199830 33200067 -52788867 - MIR SINE MIR -14 248 2 22 0 0 0 chr18 33200387 33200409 -52788525 + AT_rich Low_complexity Low_complexity 1 22 0 278 158 132 40 chr18 33201157 33201233 -52787701 + MIR SINE MIR 72 154 -108 23 68 0 0 chr18 33202734 33202778 -52786156 + AT_rich Low_complexity Low_complexity 1 44 0 575 325 45 21 chr18 33203413 33203702 -52785232 + Tigger8 DNA MER2_type 345 640 -26 24 53 0 0 chr18 33204612 33204650 -52784284 + AT_rich Low_complexity Low_complexity 1 38 0 28 29 0 0 chr18 33204715 33204750 -52784184 + AT_rich Low_complexity Low_complexity 1 35 0 374 266 9 62 chr18 33206340 33206453 -52782481 - L2 LINE L2 0 3313 3207 187 322 0 46 chr18 33207445 33207532 -52781402 + MIR SINE MIR 91 173 -89 248 328 76 8 chr18 33208137 33208268 -52780666 - MIR SINE MIR -108 154 15 1970 127 98 21 chr18 33208398 33208736 -52780198 + THE1B LTR MaLR 1 364 0 11441 89 15 0 chr18 33208736 33210292 -52778642 + THE1B-int LTR MaLR 1 1580 0 2200 114 30 22 chr18 33210292 33210653 -52778281 + THE1B LTR MaLR 1 364 0 334 344 80 36 chr18 33210757 33211094 -52777840 + MLT1J2 LTR MaLR 85 436 -14 546 234 165 16 chr18 33211592 33211780 -52777154 + MER20 DNA MER1_type 1 216 -3 357 83 0 0 chr18 33212268 33212316 -52776618 - MADE1 DNA Mariner 0 80 33 21 0 0 0 chr18 33214994 33215015 -52773919 + AT_rich Low_complexity Low_complexity 1 21 0 228 339 127 17 chr18 33215064 33215300 -52773634 + MLT1J2 LTR MaLR 69 330 -120 225 192 77 19 chr18 33215368 33215420 -52773514 + MLT1I LTR MaLR 354 408 -1 1235 173 44 20 chr18 33215865 33216114 -52772820 + AluJo SINE Alu 30 284 -28 408 202 124 31 chr18 33216620 33216749 -52772185 - MLT1A1 LTR MaLR -50 315 175 5303 49 8 14 chr18 33216827 33217943 -52770991 - SVA Other Other -954 1386 1 389 299 47 8 chr18 33218400 33218527 -52770407 + MLT1I LTR MaLR 73 204 -205 393 330 112 43 chr18 33218711 33219129 -52769805 + HAL1 LINE L1 150 596 -1911 3941 152 59 13 chr18 33219324 33220099 -52768835 + L1PB2 LINE L1 4613 5351 -800 3941 79 88 15 chr18 33220099 33220710 -52768224 + L1PB2 LINE L1 5494 6149 -2 3941 152 59 13 chr18 33220710 33220734 -52768200 + L1PB2 LINE L1 5351 6149 -2 251 119 0 24 chr18 33220738 33220780 -52768154 + AluY SINE Alu 119 159 -142 205 182 23 0 chr18 33221142 33221186 -52767748 + MIR SINE MIR 113 157 -105 290 276 0 38 chr18 33221226 33221331 -52767603 + MIR SINE MIR 154 254 -8 501 275 82 77 chr18 33221374 33221788 -52767146 + HAL1 LINE L1 1239 1654 -853 319 238 191 78 chr18 33221824 33222223 -52766711 + MLT1H LTR MaLR 106 549 0 372 300 114 18 chr18 33222227 33222447 -52766487 + HAL1 LINE L1 1677 1917 -590 228 279 45 27 chr18 33222486 33222597 -52766337 + HAL1 LINE L1 2012 2124 -383 255 23 68 0 chr18 33222599 33222643 -52766291 + (TA)n Simple_repeat Simple_repeat 2 48 0 502 304 108 41 chr18 33222980 33223368 -52765566 + L1ME4a LINE L1 5562 5975 -146 21 0 0 0 chr18 33223462 33223483 -52765451 + AT_rich Low_complexity Low_complexity 1 21 0 507 275 38 6 chr18 33223565 33223725 -52765209 + L1ME LINE L1 926 1090 -5857 361 280 18 12 chr18 33223809 33223981 -52764953 + L1ME LINE L1 1407 1705 -5242 2029 271 94 12 chr18 33224042 33225002 -52763932 + L1ME LINE L1 2960 3997 -2960 2341 79 0 3 chr18 33225544 33225847 -52763087 - AluSg SINE Alu -8 302 1 219 170 0 0 chr18 33226100 33226147 -52762787 + A-rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr18 33227878 33227899 -52761035 + AT_rich Low_complexity Low_complexity 1 21 0 23 78 0 0 chr18 33227942 33227993 -52760941 + AT_rich Low_complexity Low_complexity 1 51 0 298 295 13 0 chr18 33228074 33228152 -52760782 - MIR3 SINE MIR -3 205 127 932 223 20 42 chr18 33228794 33229234 -52759700 - MLT1D LTR MaLR -1 504 3 2967 26 6 0 chr18 33231161 33231508 -52757426 - L1PA4 LINE L1 -280 5875 5527 2475 33 3 0 chr18 33231508 33231804 -52757130 + L1PA4 LINE L1 5854 6153 -2 5367 123 6 4 chr18 33231893 33232705 -52756229 - L1PA14 LINE L1 -2 6159 5346 2583 190 122 36 chr18 33233527 33233562 -52755372 - Charlie1a DNA MER1_type -1312 1449 1418 2078 87 29 48 chr18 33233562 33233871 -52755063 - AluSp SINE Alu -6 307 5 2583 190 122 36 chr18 33233871 33234562 -52754372 - Charlie1a DNA MER1_type -1343 1418 660 180 77 0 0 chr18 33234641 33234667 -52754267 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 477 244 59 0 chr18 33234669 33234788 -52754146 + FLAM_A SINE Alu 1 126 -7 1194 163 20 0 chr18 33234790 33234993 -52753941 - MER2 DNA MER2_type -138 207 1 * 2424 202 47 82 chr18 33234993 33235682 -52753252 - Charlie1a DNA MER1_type -790 665 1 5666 101 25 29 chr18 33236244 33237043 -52751891 - L1PA15 LINE L1 -7 6158 5336 1944 137 0 11 chr18 33237043 33237363 -52751571 + AluSx SINE Alu 1 317 0 5666 101 25 29 chr18 33237363 33237925 -52751009 - L1PA15 LINE L1 -829 5336 4774 24 0 0 0 chr18 33238019 33238043 -52750891 + AT_rich Low_complexity Low_complexity 1 24 0 290 26 26 0 chr18 33239518 33239557 -52749377 + (TG)n Simple_repeat Simple_repeat 1 40 0 21 104 0 0 chr18 33240080 33240157 -52748777 + AT_rich Low_complexity Low_complexity 1 77 0 1867 124 51 0 chr18 33241361 33241655 -52747279 - AluSg SINE Alu 0 310 1 22 94 0 0 chr18 33241826 33241890 -52747044 + AT_rich Low_complexity Low_complexity 1 64 0 25 51 0 0 chr18 33241946 33241985 -52746949 + AT_rich Low_complexity Low_complexity 1 39 0 1862 162 7 0 chr18 33242511 33242808 -52746126 - AluJb SINE Alu -13 299 1 260 307 50 64 chr18 33243391 33243426 -52745508 - MIR SINE MIR -122 140 106 2158 147 88 8 chr18 33243426 33243822 -52745112 - MSTA LTR MaLR 0 428 1 260 307 50 64 chr18 33243822 33243926 -52745008 - MIR SINE MIR -156 106 3 1828 88 19 88 chr18 33244328 33244636 -52744298 - AluSq SINE Alu -26 287 1 715 136 24 0 chr18 33244840 33244965 -52743969 - FLAM_A SINE Alu -5 128 1 2499 62 32 3 chr18 33246493 33246832 -52742102 + L1PA8 LINE L1 5820 6168 -4 28 0 0 0 chr18 33246832 33246860 -52742074 + AT_rich Low_complexity Low_complexity 1 28 0 815 337 134 42 chr18 33246885 33248086 -52740848 + L2 LINE L2 1518 2828 -486 207 0 0 0 chr18 33248521 33248544 -52740390 + (A)n Simple_repeat Simple_repeat 1 23 0 649 55 0 55 chr18 33248544 33248689 -52740245 + (TA)n Simple_repeat Simple_repeat 2 138 0 24 0 0 0 chr18 33253047 33253071 -52735863 + AT_rich Low_complexity Low_complexity 1 24 0 499 341 19 54 chr18 33256241 33256447 -52732487 + MLT2E LTR ERVL 3 200 -428 1852 119 102 15 chr18 33256447 33256616 -52732318 - THE1C LTR MaLR 0 375 222 402 39 0 0 chr18 33256616 33256668 -52732266 + (GA)n Simple_repeat Simple_repeat 1 52 0 1852 119 102 15 chr18 33256668 33256841 -52732093 - THE1C LTR MaLR -153 222 3 499 341 19 54 chr18 33256841 33256892 -52732042 + MLT2E LTR ERVL 200 251 -377 1005 321 63 39 chr18 33256994 33257689 -52731245 + ERVL-E LTR ERVL 810 1521 -4133 447 226 29 0 chr18 33257700 33257802 -52731132 + ERVL-E LTR ERVL 4652 4756 -1008 1514 232 123 89 chr18 33257812 33258416 -52730518 + MLT1E2 LTR MaLR 1 626 0 1726 260 64 64 chr18 33258481 33259290 -52729644 + ERVL-E LTR ERVL 4949 5757 -7 1841 295 39 29 chr18 33259294 33259911 -52729023 + MLT2E LTR ERVL 6 628 0 27 0 0 0 chr18 33260770 33260797 -52728137 + AT_rich Low_complexity Low_complexity 1 27 0 25 31 0 0 chr18 33261599 33261631 -52727303 + AT_rich Low_complexity Low_complexity 1 32 0 265 366 92 0 chr18 33262021 33262152 -52726782 - L2 LINE L2 -36 3236 3094 2547 68 0 0 chr18 33262161 33262472 -52726462 + AluSq SINE Alu 1 311 -2 2471 57 0 13 chr18 33262518 33262833 -52726101 + AluY SINE Alu 1 311 0 1148 182 182 40 chr18 33263332 33263679 -52725255 - MSTD LTR MaLR 0 396 1 198 269 32 86 chr18 33263707 33263800 -52725134 - MIR SINE MIR -1 261 174 786 196 0 0 chr18 33264321 33264454 -52724480 + AluJo SINE Alu 1 133 -169 363 60 0 0 chr18 33264464 33264514 -52724420 + (GA)n Simple_repeat Simple_repeat 2 51 0 755 214 33 33 chr18 33264514 33264696 -52724238 + AluJo SINE Alu 131 312 0 276 282 214 15 chr18 33265504 33265635 -52723299 + MER77 LTR ERV1 54 210 -395 1153 221 139 31 chr18 33265738 33266150 -52722784 + MER77 LTR ERV1 223 744 -7 1482 220 0 10 chr18 33266564 33266873 -52722061 - AluJo SINE Alu -6 306 1 221 303 2 95 chr18 33267019 33267165 -52721769 + MIR SINE MIR 43 176 -66 216 149 0 0 chr18 33267806 33267853 -52721081 + (TC)n Simple_repeat Simple_repeat 1 47 0 22 56 0 0 chr18 33268204 33268240 -52720694 + AT_rich Low_complexity Low_complexity 1 36 0 274 368 56 8 chr18 33268435 33268560 -52720374 + L2 LINE L2 3137 3267 -5 356 378 25 51 chr18 33268723 33269194 -52719740 + L2 LINE L2 431 889 -2425 191 288 55 41 chr18 33270584 33270657 -52718277 - L2 LINE L2 -5 3308 3235 759 265 185 15 chr18 33271029 33271473 -52717461 - LTR50 LTR ERVL -253 542 8 2427 62 3 3 chr18 33271658 33271962 -52716972 + AluSc SINE Alu 1 304 -5 671 290 122 37 chr18 33273116 33273463 -52715471 + L2 LINE L2 2642 3024 -289 251 224 17 0 chr18 33273485 33273543 -52715391 - MLT1J2 LTR MaLR 0 450 392 23 0 0 0 chr18 33273796 33273819 -52715115 + AT_rich Low_complexity Low_complexity 1 23 0 331 301 75 0 chr18 33274005 33274138 -52714796 - MIR SINE MIR -23 239 97 337 310 14 41 chr18 33274234 33274379 -52714555 + HAL1b LINE L1 632 772 -576 397 211 225 64 chr18 33274793 33275139 -52713795 + L1M4 LINE L1 2193 2594 -3552 1753 177 3 0 chr18 33275246 33275534 -52713400 - AluJb SINE Alu -23 289 1 327 266 146 13 chr18 33275870 33276028 -52712906 + L1M4 LINE L1 3084 3262 -2884 1226 235 69 23 chr18 33276311 33276677 -52712257 + LTR40a LTR ERVL 62 519 0 240 175 0 0 chr18 33279440 33279503 -52709431 + GA-rich Low_complexity Low_complexity 2 64 0 373 294 35 46 chr18 33279655 33279852 -52709082 - L2 LINE L2 0 3313 3119 26 74 0 0 chr18 33280596 33280650 -52708284 + AT_rich Low_complexity Low_complexity 1 54 0 308 218 200 9 chr18 33282044 33282154 -52706780 + MLT1L LTR MaLR 431 561 -54 302 316 58 19 chr18 33282596 33282751 -52706183 - MIR SINE MIR -54 208 48 242 328 139 20 chr18 33283610 33283811 -52705123 + MIR SINE MIR 20 244 -18 24 0 0 0 chr18 33285035 33285059 -52703875 + AT_rich Low_complexity Low_complexity 1 24 0 1408 186 13 50 chr18 33285345 33285646 -52703288 + AluJb SINE Alu 1 290 -12 330 345 148 7 chr18 33286586 33286896 -52702038 - L1M4 LINE L1 -2367 3779 3426 26 50 0 0 chr18 33287044 33287084 -52701850 + AT_rich Low_complexity Low_complexity 1 40 0 607 297 35 27 chr18 33287344 33287600 -52701334 + MIR SINE MIR 2 259 -3 246 275 0 0 chr18 33287674 33287743 -52701191 + L2 LINE L2 2475 2543 -771 7169 65 1 0 chr18 33287770 33288709 -52700225 - L1PA5 LINE L1 -771 5375 4436 6295 38 5 0 chr18 33288709 33289464 -52699470 + L1PA5 LINE L1 5380 6143 -11 299 247 90 11 chr18 33290112 33290201 -52698733 + MIR SINE MIR 102 197 -65 26 30 0 0 chr18 33291125 33291158 -52697776 + AT_rich Low_complexity Low_complexity 1 33 0 27 0 0 0 chr18 33291519 33291546 -52697388 + AT_rich Low_complexity Low_complexity 1 27 0 858 132 0 24 chr18 33291744 33291891 -52697043 + (TTCC)n Simple_repeat Simple_repeat 3 147 -18 1477 227 77 0 chr18 33291891 33292230 -52696704 - MLT1A1 LTR MaLR 0 365 1 858 132 0 24 chr18 33292230 33292249 -52696685 + (TTCC)n Simple_repeat Simple_repeat 147 165 0 217 192 0 39 chr18 33292236 33292314 -52696620 + T-rich Low_complexity Low_complexity 2 76 0 * 29 47 0 0 chr18 33293127 33293170 -52695764 + AT_rich Low_complexity Low_complexity 1 43 0 250 214 17 51 chr18 33294618 33294705 -52694229 + (TATAA)n Simple_repeat Simple_repeat 4 88 -28 1986 125 10 10 chr18 33294705 33295000 -52693934 - AluSx SINE Alu -17 295 1 250 214 17 51 chr18 33295000 33295029 -52693905 + (TATAA)n Simple_repeat Simple_repeat 88 116 0 2287 87 7 0 chr18 33295420 33295719 -52693215 + AluSx SINE Alu 1 301 -11 33 25 0 0 chr18 33296504 33296544 -52692390 + AT_rich Low_complexity Low_complexity 1 40 0 1069 318 47 0 chr18 33298637 33298955 -52689979 - LTR16A LTR ERVL -13 437 105 446 309 59 7 chr18 33299075 33299227 -52689707 - MIR SINE MIR -65 197 38 1099 156 10 10 chr18 33299636 33299828 -52689106 - MER47A DNA MER2_type -153 213 22 243 0 0 0 chr18 33299843 33299870 -52689064 + (TG)n Simple_repeat Simple_repeat 2 28 0 193 321 0 37 chr18 33300039 33300120 -52688814 + L2 LINE L2 3233 3310 -3 198 269 32 86 chr18 33300981 33301074 -52687860 + MIR SINE MIR 174 261 -1 1131 184 182 40 chr18 33301102 33301449 -52687485 + MSTD LTR MaLR 1 396 0 2090 98 0 19 chr18 33301948 33302264 -52686670 - AluY SINE Alu -1 310 1 1760 127 18 0 chr18 33302310 33302586 -52686348 - AluSq SINE Alu 0 313 33 868 233 70 60 chr18 33302711 33303011 -52685923 + L1MC4 LINE L1 7351 7653 -389 506 248 10 82 chr18 33303071 33303277 -52685657 + LTR41 LTR ERVL 1 191 -582 324 205 0 13 chr18 33303483 33303561 -52685373 + LTR41 LTR ERVL 584 660 -113 611 111 33 0 chr18 33303562 33303652 -52685282 - MER58B DNA MER1_type 0 341 249 269 308 13 0 chr18 33304390 33304468 -52684466 - L1ME LINE L1 -5990 80 2 343 242 75 25 chr18 33304595 33304715 -52684219 - L2 LINE L2 0 3313 3188 346 310 52 26 chr18 33304734 33304889 -52684045 - L1ME LINE L1 -420 5701 5543 199 333 72 43 chr18 33304950 33305088 -52683846 + MIR SINE MIR 120 261 -1 397 359 31 22 chr18 33305254 33305477 -52683457 - MIR SINE MIR -18 244 20 25 31 0 0 chr18 33306160 33306192 -52682742 + AT_rich Low_complexity Low_complexity 1 32 0 8334 215 25 22 chr18 33308207 33309937 -52678997 + L1M2c LINE L1 1 1736 -5053 431 240 103 86 chr18 33410889 33411064 -52577870 + MER5A DNA MER1_type 1 178 -11 2338 90 0 0 chr18 33413084 33413373 -52575561 - AluSx SINE Alu -23 289 1 30 0 0 0 chr18 33413389 33413419 -52575515 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr18 33413501 33413524 -52575410 + AT_rich Low_complexity Low_complexity 1 23 0 420 299 115 17 chr18 33413884 33414380 -52574554 - L1ME LINE L1 -437 5733 5177 241 325 119 12 chr18 33414687 33414847 -52574087 - MIR3 SINE MIR -23 185 9 6916 25 8 1 chr18 33415789 33416616 -52572318 + L1PA4 LINE L1 5321 6153 -2 27 49 0 0 chr18 33417469 33417510 -52571424 + AT_rich Low_complexity Low_complexity 1 41 0 7972 214 26 54 chr18 33417515 33419976 -52568958 - L1PA16 LINE L1 -20 6203 3675 739 169 7 22 chr18 33419976 33420112 -52568822 + AluJo SINE Alu 1 134 -178 7972 214 26 54 chr18 33420112 33420507 -52568427 - L1PA16 LINE L1 -2548 3675 3270 2239 102 0 3 chr18 33420507 33420811 -52568123 - AluSg SINE Alu -7 303 1 7972 214 26 54 chr18 33420811 33421420 -52567514 - L1PA16 LINE L1 -2953 3270 2758 751 152 23 0 chr18 33421452 33421584 -52567350 + L1PA15-16 LINE L1 2269 2403 -4446 490 175 0 29 chr18 33421587 33421690 -52567244 - AluJ/FLAM SINE Alu -212 100 1 685 163 8 0 chr18 33421694 33421817 -52567117 + L1 LINE L1 3650 3773 -2373 4627 236 49 38 chr18 33421824 33422114 -52566820 - L1PA16 LINE L1 -3456 2747 2462 210 91 0 0 chr18 33422114 33422147 -52566787 + (TATG)n Simple_repeat Simple_repeat 2 34 0 4627 236 49 38 chr18 33422147 33423796 -52565138 - L1PA16 LINE L1 -3741 2462 687 3281 106 10 4 chr18 33423805 33424288 -52564646 - L1PA11 LINE L1 -4 6170 5685 309 271 52 35 chr18 33424942 33425077 -52563857 + MIR SINE MIR 30 164 -68 11143 179 31 17 chr18 33425314 33428774 -52560160 + L1PA10 LINE L1 2666 6164 -4 3198 108 4 2 chr18 33428779 33429250 -52559684 + L1PB1 LINE L1 5317 5788 -363 260 212 15 0 chr18 33429257 33429323 -52559611 + (CATATA)n Simple_repeat Simple_repeat 5 71 0 2502 111 5 0 chr18 33429327 33429696 -52559238 + L1PB1 LINE L1 5781 6151 0 1668 164 55 7 chr18 33430142 33430258 -52558676 + AluJo SINE Alu 6 115 -197 222 37 0 0 chr18 33430258 33430285 -52558649 + (CAA)n Simple_repeat Simple_repeat 1 27 0 1668 164 55 7 chr18 33430285 33430461 -52558473 + AluJo SINE Alu 115 312 0 2216 105 0 7 chr18 33430553 33430859 -52558075 + AluSq SINE Alu 7 310 -3 32 26 0 0 chr18 33431931 33431970 -52556964 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr18 33432106 33432127 -52556807 + AT_rich Low_complexity Low_complexity 1 21 0 226 180 0 0 chr18 33432875 33432936 -52555998 + L1ME4a LINE L1 6061 6121 0 312 314 8 8 chr18 33433098 33433216 -52555718 + Charlie2 DNA MER1_type 236 353 -2429 451 251 132 18 chr18 33433247 33433474 -52555460 - L1MEc LINE L1 -2451 4113 3861 262 286 29 29 chr18 33433932 33434142 -52554792 - L1MEd LINE L1 -3795 2334 2125 28 29 0 0 chr18 33434462 33434497 -52554437 + AT_rich Low_complexity Low_complexity 1 35 0 1349 230 58 11 chr18 33434858 33435206 -52553728 + MLT1A1 LTR MaLR 2 365 0 380 301 113 57 chr18 33435216 33435622 -52553312 - L1MEd LINE L1 -4905 1214 786 597 255 25 5 chr18 33435930 33436134 -52552800 - L1ME LINE L1 -3571 3073 2866 26 0 0 0 chr18 33436362 33436388 -52552546 + AT_rich Low_complexity Low_complexity 1 26 0 356 320 67 53 chr18 33436440 33436815 -52552119 - L1ME LINE L1 -4304 2521 2142 3409 226 41 37 chr18 33436874 33437278 -52551656 - L1MEc LINE L1 -2886 3678 3277 189 0 0 0 chr18 33437278 33437299 -52551635 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 3409 226 41 37 chr18 33437299 33437808 -52551126 - L1MEc LINE L1 -3287 3277 2771 1939 155 3 19 chr18 33437808 33438124 -52550810 - AluSx SINE Alu -1 311 1 3409 226 41 37 chr18 33438124 33438200 -52550734 - L1MEc LINE L1 -3793 2771 2697 2695 122 82 11 chr18 33438200 33438677 -52550257 - MER9 LTR ERVK 0 511 1 3409 226 41 37 chr18 33438677 33438945 -52549989 - L1MEc LINE L1 -3867 2697 2448 2459 252 75 33 chr18 33438950 33439235 -52549699 - L1MEc LINE L1 -5193 852 580 2230 117 0 0 chr18 33439235 33439544 -52549390 + AluSc SINE Alu 1 309 0 2459 252 75 33 chr18 33439544 33440072 -52548862 - L1MEc LINE L1 -5465 580 5 373 268 130 70 chr18 33440104 33440912 -52548022 - L1ME LINE L1 -4552 2092 1231 1835 148 18 6 chr18 33440970 33441301 -52547633 - L1 LINE L1 -1197 6368 6034 21347 166 22 15 chr18 33441315 33441546 -52547388 - L1 LINE L1 -3039 4526 4298 1547 110 0 14 chr18 33441546 33441764 -52547170 - AluSg/x SINE Alu -17 293 79 21347 166 22 15 chr18 33441764 33443238 -52545696 - L1 LINE L1 -3267 4298 2836 2025 137 16 0 chr18 33443238 33443545 -52545389 + AluSx SINE Alu 1 312 0 21347 166 22 15 chr18 33443545 33446325 -52542609 - L1 LINE L1 -4729 2836 13 274 275 90 78 chr18 33446681 33446848 -52542086 - MER5A DNA MER1_type -19 170 2 1951 156 0 0 chr18 33446958 33447253 -52541681 + AluSx SINE Alu 1 295 -17 185 237 169 17 chr18 33447962 33448021 -52540913 + L2 LINE L2 3182 3249 -23 22 70 0 0 chr18 33448711 33448754 -52540180 + AT_rich Low_complexity Low_complexity 1 43 0 4189 243 67 14 chr18 33449236 33450416 -52538518 - L1ME LINE L1 -5296 1246 5 3567 246 27 18 chr18 33450425 33451102 -52537832 + L1MD2 LINE L1 5089 5775 -584 2012 124 148 19 chr18 33451102 33451481 -52537453 + MSTA LTR MaLR 1 428 0 3567 246 27 18 chr18 33451481 33451916 -52537018 + L1MD2 LINE L1 5775 6205 -154 460 304 136 23 chr18 33452524 33453129 -52535805 + L1ME3A LINE L1 3875 4547 -1599 330 302 134 69 chr18 33453563 33454153 -52534781 + L1ME3A LINE L1 5394 6005 -165 207 69 0 0 chr18 33455009 33455038 -52533896 + (CA)n Simple_repeat Simple_repeat 2 30 0 195 316 66 0 chr18 33455251 33455327 -52533607 + MIR SINE MIR 74 154 -108 990 200 19 23 chr18 33455746 33455961 -52532973 + MER20 DNA MER1_type 1 214 -5 263 352 56 32 chr18 33456329 33456454 -52532480 - MIR SINE MIR -65 143 16 584 227 57 34 chr18 33456590 33456766 -52532168 - L1ME3A LINE L1 -12 6158 5979 250 304 0 25 chr18 33456856 33456935 -52531999 + CT-rich Low_complexity Low_complexity 4 80 0 207 0 0 0 chr18 33457597 33457620 -52531314 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2128 206 42 15 chr18 33460660 33461135 -52527799 + MLT1D LTR MaLR 5 492 -13 1963 139 0 26 chr18 33461173 33461476 -52527458 + AluSx SINE Alu 1 295 -17 1548 165 168 40 chr18 33461841 33462246 -52526688 - MSTB2 LTR MaLR 0 457 1 457 268 85 60 chr18 33462434 33462669 -52526265 - MIR SINE MIR -2 260 20 336 276 37 30 chr18 33464114 33464248 -52524686 - MER110 LTR ERV1 -43 448 314 1618 192 25 17 chr18 33464249 33464608 -52524326 - L1MD2 LINE L1 -1 6358 5997 3504 228 81 57 chr18 33464696 33466491 -52522443 - L1MDb LINE L1 -4364 2042 199 1211 250 28 22 chr18 33466508 33466832 -52522102 - MLT1A2 LTR MaLR -48 326 1 746 278 12 0 chr18 33466833 33467006 -52521928 - L1MDb LINE L1 -6207 202 28 27 29 0 0 chr18 33467909 33467943 -52520991 + AT_rich Low_complexity Low_complexity 1 34 0 266 281 147 58 chr18 33467977 33468242 -52520692 + MLT1H-int LTR MaLR 1193 1366 -5 285 223 80 62 chr18 33468247 33468359 -52520575 + MLT1H LTR MaLR 1 157 -392 424 281 12 59 chr18 33468477 33468651 -52520283 - MLT1E-int LTR MaLR -1219 152 4 1274 293 82 35 chr18 33468655 33468969 -52519965 - MLT1E LTR MaLR -2 565 216 2162 123 3 0 chr18 33468969 33469277 -52519657 + AluSp SINE Alu 1 309 -4 1274 293 82 35 chr18 33469277 33469504 -52519430 - MLT1E LTR MaLR -351 216 1 357 335 24 29 chr18 33469618 33469824 -52519110 + LTR33 LTR ERVL 314 518 -3 29 47 0 0 chr18 33470139 33470182 -52518752 + AT_rich Low_complexity Low_complexity 1 43 0 834 164 0 0 chr18 33470789 33470917 -52518017 + FRAM SINE Alu 2 129 -47 23 0 0 0 chr18 33471112 33471135 -52517799 + AT_rich Low_complexity Low_complexity 1 23 0 203 206 50 44 chr18 33471521 33471681 -52517253 + (TATAA)n Simple_repeat Simple_repeat 1 161 0 247 224 193 25 chr18 33471984 33472145 -52516789 + L1M4 LINE L1 5367 5554 -630 249 33 0 0 chr18 33472533 33472563 -52516371 + (TG)n Simple_repeat Simple_repeat 1 30 0 1573 211 105 8 chr18 33472618 33472979 -52515955 + MSTD LTR MaLR 1 396 0 1027 198 0 54 chr18 33472986 33473228 -52515706 + L1PA16 LINE L1 5938 6166 0 1574 319 95 12 chr18 33474144 33475116 -52513818 - L2 LINE L2 -1 3312 2270 2389 286 128 11 chr18 33475118 33476161 -52512773 - L2 LINE L2 -1923 1391 227 276 261 261 63 chr18 33476468 33476690 -52512244 - L2 LINE L2 -3036 278 13 2135 90 3 0 chr18 33477191 33477481 -52511453 + AluSg SINE Alu 1 291 -19 1641 166 59 24 chr18 33477887 33478176 -52510758 + AluJb SINE Alu 14 312 0 828 247 155 18 chr18 33478191 33478592 -52510342 - L1ME2 LINE L1 -127 6037 5582 1602 264 116 44 chr18 33478592 33479294 -52509640 - L1MB2 LINE L1 -5 6166 5516 203 0 37 0 chr18 33479294 33479321 -52509613 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1602 264 116 44 chr18 33479321 33480063 -52508871 - L1MB2 LINE L1 -655 5516 4829 976 42 0 0 chr18 33480063 33480183 -52508751 - L1PA5 LINE L1 -3 6151 6032 1602 264 116 44 chr18 33480183 33480731 -52508203 - L1MB2 LINE L1 -1342 4829 3172 189 220 186 85 chr18 33480734 33480852 -52508082 - MIR SINE MIR -113 149 20 215 309 82 27 chr18 33481241 33481351 -52507583 + MER5A DNA MER1_type 24 139 -50 410 197 112 51 chr18 33482449 33482627 -52506307 + MER53 DNA DNA 1 189 0 28 29 0 0 chr18 33483268 33483303 -52505631 + AT_rich Low_complexity Low_complexity 1 35 0 209 176 0 20 chr18 33484399 33484450 -52504484 + (TA)n Simple_repeat Simple_repeat 2 51 0 305 295 110 15 chr18 33485041 33485241 -52503693 + MLT1L LTR MaLR 383 601 -14 35 71 0 0 chr18 33486983 33487053 -52501881 + AT_rich Low_complexity Low_complexity 1 70 0 305 82 20 0 chr18 33487693 33487742 -52501192 + (CA)n Simple_repeat Simple_repeat 1 50 0 275 102 0 20 chr18 33488356 33488405 -52500529 + (TG)n Simple_repeat Simple_repeat 2 49 0 2164 153 104 0 chr18 33488874 33489259 -52499675 - MSTA LTR MaLR -3 425 1 307 328 40 50 chr18 33489425 33489724 -52499210 - L1MEc LINE L1 -6006 390 95 2462 171 20 2 chr18 33489844 33490301 -52498633 - L1MA9 LINE L1 -30 6282 5818 2557 194 62 23 chr18 33490333 33490865 -52498069 - MER68 LTR ERV1 -9 553 1 391 241 46 2 chr18 33491058 33491226 -52497708 - MER82 DNA MER2_type -1 652 444 348 263 118 20 chr18 33491283 33491435 -52497499 + MIR3 SINE MIR 30 196 -12 201 163 0 0 chr18 33491437 33491486 -52497448 + (TA)n Simple_repeat Simple_repeat 1 49 0 319 250 57 0 chr18 33491495 33491583 -52497351 - MER82 DNA MER2_type -560 93 1 303 335 53 11 chr18 33491775 33492074 -52496860 - L1M2 LINE L1 -992 2217 1941 311 116 0 0 chr18 33492166 33492209 -52496725 + MER58 DNA MER1_type 2355 2397 -23 380 294 20 34 chr18 33492483 33492629 -52496305 + L2 LINE L2 3158 3301 -12 1615 318 107 47 chr18 33493213 33493705 -52495229 + L2 LINE L2 1564 2025 -1289 405 0 0 0 chr18 33493705 33493750 -52495184 + (TAA)n Simple_repeat Simple_repeat 2 46 0 1615 318 107 47 chr18 33493750 33494534 -52494400 + L2 LINE L2 2025 2916 -398 2863 85 0 3 chr18 33495092 33495468 -52493466 - THE1C LTR MaLR 0 375 1 963 279 121 14 chr18 33495586 33495941 -52492993 + L2 LINE L2 2921 3313 0 31 68 0 0 chr18 33496144 33496203 -52492731 + AT_rich Low_complexity Low_complexity 1 59 0 542 323 92 9 chr18 33497322 33497539 -52491395 + MIR SINE MIR 13 247 -15 23 68 0 0 chr18 33497671 33497715 -52491219 + AT_rich Low_complexity Low_complexity 1 44 0 261 0 0 0 chr18 33498746 33498775 -52490159 + (TG)n Simple_repeat Simple_repeat 2 30 0 594 326 50 3 chr18 33499569 33500014 -52488920 + LTR33 LTR ERVL 4 497 -24 432 380 16 8 chr18 33501372 33501627 -52487307 + HERVL LTR ERVL 2952 3208 -2446 8795 245 69 31 chr18 33502179 33504809 -52484125 - L1MCa LINE L1 -895 5531 3002 5913 153 47 22 chr18 33504809 33506008 -52482926 + Tigger3b DNA MER2_type 2 1229 -2 8795 245 69 31 chr18 33506008 33506306 -52482628 - L1MCa LINE L1 -3424 3002 2717 2016 55 0 23 chr18 33506306 33506563 -52482371 + AluY SINE Alu 56 306 -5 8795 245 69 31 chr18 33506563 33507192 -52481742 - L1MCa LINE L1 -3709 2717 2113 2325 76 0 10 chr18 33507192 33507494 -52481440 + AluY SINE Alu 1 299 -12 8795 245 69 31 chr18 33507494 33508385 -52480549 - L1MCa LINE L1 -4313 2113 814 375 191 34 0 chr18 33508414 33508503 -52480431 - L1MCa LINE L1 -6232 194 103 589 302 28 0 chr18 33508550 33508729 -52480205 + LTR33 LTR ERVL 335 518 -3 309 326 82 7 chr18 33508884 33509019 -52479915 + MIR SINE MIR 7 151 -111 312 315 0 0 chr18 33509309 33509334 -52479600 - L1MC4 LINE L1 -1336 6706 6682 243 0 0 0 chr18 33509334 33509361 -52479573 + (GA)n Simple_repeat Simple_repeat 2 28 0 312 315 0 0 chr18 33509361 33509427 -52479507 - L1MC4 LINE L1 -1359 6683 6615 347 323 149 2 chr18 33511517 33511748 -52477186 - L1MDa LINE L1 -4509 1917 1511 1054 231 77 93 chr18 33511797 33512332 -52476602 - MER39 LTR ERV1 0 707 1 2065 233 40 43 chr18 33512498 33512678 -52476256 - MLT1E3 LTR MaLR 0 624 445 1994 149 3 7 chr18 33512678 33512980 -52475954 - AluSx SINE Alu -11 301 1 2065 233 40 43 chr18 33512980 33513425 -52475509 - MLT1E3 LTR MaLR -179 445 1 635 111 14 104 chr18 33514159 33514303 -52474631 - FRAM SINE Alu -45 131 1 22 0 0 0 chr18 33514826 33514848 -52474086 + GC_rich Low_complexity Low_complexity 1 22 0 251 318 60 46 chr18 33515713 33515864 -52473070 - MIR3 SINE MIR -26 182 30 335 59 0 20 chr18 33517160 33517211 -52471723 + (TG)n Simple_repeat Simple_repeat 1 50 0 1852 201 37 2 chr18 33517268 33517703 -52471231 - MER89 LTR ERV1 -4 555 6 547 360 16 14 chr18 33517824 33518067 -52470867 - MIR SINE MIR -3 259 21 253 356 198 16 chr18 33519221 33519993 -52468941 + L2 LINE L2 1663 2575 -739 181 159 32 0 chr18 33520006 33520069 -52468865 + (TTA)n Simple_repeat Simple_repeat 3 67 0 534 238 244 0 chr18 33520372 33520540 -52468394 + MER3 DNA MER1_type 1 209 0 229 225 175 12 chr18 33520690 33520770 -52468164 - L2 LINE L2 -4 3309 3217 26 0 0 0 chr18 33521546 33521572 -52467362 + AT_rich Low_complexity Low_complexity 1 26 0 216 0 0 0 chr18 33521939 33521963 -52466971 + (CA)n Simple_repeat Simple_repeat 1 24 0 21 0 0 0 chr18 33522369 33522390 -52466544 + AT_rich Low_complexity Low_complexity 1 21 0 366 23 0 0 chr18 33523233 33523276 -52465658 + (TG)n Simple_repeat Simple_repeat 1 43 0 216 0 0 0 chr18 33524540 33524564 -52464370 + (A)n Simple_repeat Simple_repeat 1 24 0 2349 62 0 10 chr18 33524660 33524965 -52463969 - AluY SINE Alu -9 302 1 339 284 148 58 chr18 33525035 33525393 -52463541 - MLT1J2 LTR MaLR -37 409 1 459 186 0 0 chr18 33526363 33526460 -52462474 + CT-rich Low_complexity Low_complexity 1 97 0 2242 73 3 3 chr18 33526996 33527282 -52461652 - AluSc SINE Alu 0 309 24 259 264 66 9 chr18 33527282 33527388 -52461546 + MIR SINE MIR 34 145 -117 217 339 87 8 chr18 33527481 33527608 -52461326 + L2 LINE L2 3167 3303 -10 25 31 0 0 chr18 33528901 33528933 -52460001 + AT_rich Low_complexity Low_complexity 1 32 0 561 110 0 0 chr18 33529547 33529629 -52459305 + AluY SINE Alu 1 82 -229 204 389 0 0 chr18 33529661 33529751 -52459183 - L3 LINE CR1 -73 1504 1415 813 98 0 16 chr18 33530811 33530933 -52458001 - L1PA8 LINE L1 -9 6163 6044 3130 128 105 26 chr18 33530979 33531548 -52457386 - LTR18B LTR ERVL 0 614 1 397 345 93 12 chr18 33532320 33532525 -52456409 + L1ME3 LINE L1 5647 5867 -295 676 184 50 96 chr18 33533225 33533443 -52455491 - MER3 DNA MER1_type -1 208 1 599 230 0 24 chr18 33534320 33534446 -52454488 + MER63 DNA MER1_type 3 751 -311 270 157 0 39 chr18 33534452 33534496 -52454438 + MER63 DNA MER1_type 982 1023 -37 327 123 46 46 chr18 33534496 33534561 -52454373 - LTR40b LTR ERVL 0 462 398 397 326 87 5 chr18 33534718 33534914 -52454020 + L2 LINE L2 2889 3100 -213 566 218 35 0 chr18 33534914 33535084 -52453850 - L1M4 LINE L1 -3147 3497 3322 8656 162 45 48 chr18 33535120 33535272 -52453662 - L1PA15 LINE L1 0 6165 6014 1844 149 7 3 chr18 33535272 33535560 -52453374 + AluSx SINE Alu 1 289 -23 8656 162 45 48 chr18 33535560 33538151 -52450783 - L1PA15 LINE L1 -151 6014 3422 2707 186 38 101 chr18 33538150 33538362 -52450572 - L1MD2 LINE L1 -10 6232 6008 * 315 0 0 0 chr18 33538362 33538397 -52450537 + (TG)n Simple_repeat Simple_repeat 2 36 0 2707 186 38 101 chr18 33538397 33539055 -52449879 - L1MD2 LINE L1 -234 6008 5417 2918 224 81 43 chr18 33539062 33539485 -52449449 - L1MDa LINE L1 -5675 865 460 2370 73 0 0 chr18 33539485 33539787 -52449147 - AluY SINE Alu -9 302 1 2918 224 81 43 chr18 33539787 33540180 -52448754 - L1MDa LINE L1 -6080 460 18 7216 44 0 0 chr18 33540226 33541568 -52447366 - L1PA5 LINE L1 -5 6149 4806 263 292 9 9 chr18 33541617 33541730 -52447204 - L1M4 LINE L1 -5243 1403 1291 23 0 0 0 chr18 33541737 33541760 -52447174 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr18 33542443 33542465 -52446469 + AT_rich Low_complexity Low_complexity 1 22 0 1167 249 94 26 chr18 33542898 33543427 -52445507 + L1MC5 LINE L1 7343 7907 -54 22 88 0 0 chr18 33543750 33543807 -52445127 + AT_rich Low_complexity Low_complexity 1 57 0 334 158 347 11 chr18 33544163 33544258 -52444676 - MER63A DNA MER1_type 0 210 84 29 70 0 0 chr18 33544311 33544368 -52444566 + AT_rich Low_complexity Low_complexity 1 57 0 963 241 5 5 chr18 33544460 33544672 -52444262 + MER58C DNA MER1_type 1 212 -3 691 294 198 24 chr18 33544674 33544719 -52444215 - Charlie8 DNA MER1_type -325 2092 2056 1407 226 51 88 chr18 33544719 33545289 -52443645 - MLT1H LTR MaLR 0 549 1 691 294 198 24 chr18 33545289 33545794 -52443140 - Charlie8 DNA MER1_type -361 2056 1446 769 295 100 22 chr18 33546348 33546549 -52442385 - Charlie8 DNA MER1_type -1252 1165 981 1578 169 48 7 chr18 33546549 33546844 -52442090 + AluJb SINE Alu 1 307 -5 769 295 100 22 chr18 33546844 33547134 -52441800 - Charlie8 DNA MER1_type -1436 981 636 26 30 0 0 chr18 33547390 33547423 -52441511 + AT_rich Low_complexity Low_complexity 1 33 0 406 287 97 52 chr18 33547739 33548644 -52440290 - L1MCa LINE L1 -2211 4215 3270 384 291 117 47 chr18 33549264 33549649 -52439285 - L1MCa LINE L1 -3478 2948 2537 22 0 0 0 chr18 33550353 33550375 -52438559 + AT_rich Low_complexity Low_complexity 1 22 0 32 26 0 0 chr18 33550641 33550680 -52438254 + AT_rich Low_complexity Low_complexity 1 39 0 2988 220 18 20 chr18 33550812 33551544 -52437390 - L1MB7 LINE L1 -19 6165 5436 1028 172 82 20 chr18 33551557 33551801 -52437133 - L1MC2 LINE L1 -9 6335 6077 1118 244 164 41 chr18 33551805 33552346 -52436588 - L1MCa LINE L1 -5774 652 45 1639 241 58 24 chr18 33552391 33552856 -52436078 - L1M4 LINE L1 -5414 1128 648 261 351 38 23 chr18 33552925 33553056 -52435878 - MER5B DNA MER1_type 0 178 46 550 235 0 8 chr18 33553069 33553188 -52435746 + FLAM_A SINE Alu 1 118 -15 759 289 61 11 chr18 33553397 33553660 -52435274 - L1M4 LINE L1 -6157 385 110 477 320 95 34 chr18 33554144 33555280 -52433654 - L1MB7 LINE L1 -867 5279 4075 389 308 139 24 chr18 33555323 33556199 -52432735 - L1MB7 LINE L1 -2315 3831 2855 377 294 78 31 chr18 33556242 33556497 -52432437 - L1MB7 LINE L1 -3675 2471 2205 2280 102 0 7 chr18 33556654 33556958 -52431976 - AluSq SINE Alu -11 302 1 27 0 0 0 chr18 33556963 33556990 -52431944 + AT_rich Low_complexity Low_complexity 1 27 0 396 216 0 21 chr18 33557321 33557418 -52431516 - L1M4 LINE L1 -1163 4983 4889 5447 186 72 31 chr18 33557454 33558948 -52429986 - L1MDa LINE L1 -4071 2469 915 743 127 52 0 chr18 33559032 33559166 -52429768 + L1MDa LINE L1 2207 2347 -4193 2437 247 59 75 chr18 33559168 33559571 -52429363 - L1MDa LINE L1 -5546 994 586 2314 97 0 3 chr18 33559571 33559870 -52429064 + AluSg SINE Alu 1 298 -12 2437 247 59 75 chr18 33559870 33560309 -52428625 - L1MDa LINE L1 -5954 586 15 510 288 44 70 chr18 33560436 33560577 -52428357 - MIR SINE MIR 0 262 119 1649 151 0 60 chr18 33560577 33560875 -52428059 + AluSx SINE Alu 1 280 -32 213 39 0 0 chr18 33560875 33560901 -52428033 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 510 288 44 70 chr18 33560901 33560987 -52427947 - MIR SINE MIR -141 121 40 345 302 128 43 chr18 33561790 33562048 -52426886 + Charlie7 DNA MER1_type 5 284 -2328 1780 241 61 70 chr18 33562094 33563032 -52425902 + Charlie7 DNA MER1_type 1485 2413 -199 2131 81 10 52 chr18 33563054 33563362 -52425572 - AluSx SINE Alu -13 299 5 22 70 0 0 chr18 33563392 33563435 -52425499 + AT_rich Low_complexity Low_complexity 1 43 0 5695 187 47 43 chr18 33565065 33565308 -52423626 + L1MC3 LINE L1 6382 6622 -1163 6966 136 17 23 chr18 33565308 33566546 -52422388 + Tigger3b DNA MER2_type 2 1231 0 5695 187 47 43 chr18 33566546 33566899 -52422035 + L1MC3 LINE L1 6622 6972 -813 2193 126 7 0 chr18 33566899 33567200 -52421734 + AluSq SINE Alu 3 305 -8 5695 187 47 43 chr18 33567200 33567999 -52420935 + L1MC3 LINE L1 6972 7784 -1 397 247 54 0 chr18 33568322 33568415 -52420519 + MIR SINE MIR 58 155 -107 2048 126 143 11 chr18 33568415 33568787 -52420147 - MER61C LTR ERV1 0 434 14 405 143 0 0 chr18 33568805 33568868 -52420066 - MER61C-int LTR ERV1 0 5217 5155 24386 115 21 14 chr18 33568900 33571754 -52417180 - MER61C-int LTR ERV1 -35 5182 2294 2679 20 20 0 chr18 33571754 33572058 -52416876 + AluYa5 SINE Alu 1 310 -1 24386 115 21 14 chr18 33572058 33572999 -52415935 - MER61C-int LTR ERV1 -2923 2294 1361 1754 104 42 0 chr18 33572994 33573253 -52415681 - MER61C-int LTR ERV1 -4004 1213 944 * 2396 126 18 23 chr18 33573253 33573651 -52415283 - MER61C-int LTR ERV1 -4377 840 445 1954 85 9 109 chr18 33573651 33573981 -52414953 + AluSg SINE Alu 1 297 -13 311 222 83 28 chr18 33574025 33574133 -52414801 - MER61C-int LTR ERV1 -6336 755 642 680 161 39 58 chr18 33574169 33574324 -52414610 - MER61C-int LTR ERV1 -5064 153 2 1894 182 78 12 chr18 33574324 33574736 -52414198 - MER61C LTR ERV1 0 434 7 232 337 109 0 chr18 33574736 33574837 -52414097 + MIR SINE MIR 151 262 0 203 308 46 0 chr18 33575371 33575436 -52413498 - L2 LINE L2 -36 3236 3169 450 317 22 22 chr18 33575485 33575756 -52413178 + L1ME1 LINE L1 1300 1570 -4814 2174 258 12 30 chr18 33575816 33576561 -52412373 + L1ME1 LINE L1 4862 5593 -789 1103 225 95 3 chr18 33576603 33576919 -52412015 + L1ME1 LINE L1 5809 6153 -249 263 293 43 30 chr18 33576924 33577088 -52411846 + L1MB8 LINE L1 5992 6157 -21 2337 81 0 7 chr18 33577120 33577416 -52411518 - AluY SINE Alu -17 294 1 2913 271 87 29 chr18 33577556 33577948 -52410986 + L1ME2 LINE L1 3516 3884 -2262 1889 97 41 15 chr18 33577948 33578215 -52410719 + AluY SINE Alu 23 296 -15 2913 271 87 29 chr18 33578215 33579371 -52409563 + L1ME2 LINE L1 3884 5164 -982 180 0 0 0 chr18 33579371 33579391 -52409543 + (TA)n Simple_repeat Simple_repeat 2 21 0 2913 271 87 29 chr18 33579391 33579455 -52409479 + L1ME2 LINE L1 5164 5223 -923 890 236 9 9 chr18 33579463 33579679 -52409255 + L1ME2 LINE L1 5937 6152 -12 2351 78 7 0 chr18 33581910 33582218 -52406716 + AluY SINE Alu 1 310 -1 258 315 8 71 chr18 33582466 33582593 -52406341 - L2 LINE L2 -5 3308 3190 184 304 89 27 chr18 33584941 33585053 -52403881 + MIR SINE MIR 88 206 -56 21 0 0 0 chr18 33585346 33585367 -52403567 + AT_rich Low_complexity Low_complexity 1 21 0 201 279 35 0 chr18 33585903 33585989 -52402945 + (CG)n Simple_repeat Simple_repeat 2 90 0 402 21 0 0 chr18 33586248 33586295 -52402639 + (CCG)n Simple_repeat Simple_repeat 2 48 0 37 52 0 0 chr18 33586494 33586552 -52402382 + GC_rich Low_complexity Low_complexity 1 58 0 219 171 24 0 chr18 33587385 33587426 -52401508 + CT-rich Low_complexity Low_complexity 2 43 0 25 0 0 0 chr18 33588269 33588294 -52400640 + AT_rich Low_complexity Low_complexity 1 25 0 264 30 0 0 chr18 33589258 33589291 -52399643 + (TG)n Simple_repeat Simple_repeat 1 33 0 315 0 0 0 chr18 33590496 33590531 -52398403 + (TG)n Simple_repeat Simple_repeat 2 36 0 236 298 89 0 chr18 33591877 33592001 -52396933 - L2 LINE L2 -223 3049 2915 209 302 16 0 chr18 33592597 33592660 -52396274 + (TATATG)n Simple_repeat Simple_repeat 6 69 0 285 128 0 0 chr18 33592660 33592707 -52396227 + (TG)n Simple_repeat Simple_repeat 2 48 0 259 263 0 0 chr18 33592867 33592924 -52396010 + CT-rich Low_complexity Low_complexity 2 58 0 21 0 0 0 chr18 33594294 33594315 -52394619 + AT_rich Low_complexity Low_complexity 1 21 0 301 281 23 70 chr18 33595197 33595325 -52393609 - L1M4c LINE L1 -4567 1859 1738 236 115 77 19 chr18 33595331 33595383 -52393551 - L1MD2 LINE L1 -4 6355 6301 235 239 91 34 chr18 33595608 33595696 -52393238 - L1M4c LINE L1 -882 1905 1624 302 324 102 74 chr18 33596079 33596511 -52392423 - LTR67 LTR ERVL -2 555 112 533 291 57 9 chr18 33596895 33597105 -52391829 + MIR SINE MIR 36 255 -7 333 356 20 0 chr18 33597594 33597743 -52391191 - MIR SINE MIR 0 262 111 508 283 79 89 chr18 33597745 33598060 -52390874 - MLT1K LTR MaLR 0 588 277 26 0 0 0 chr18 33598419 33598445 -52390489 + AT_rich Low_complexity Low_complexity 1 26 0 2271 78 0 0 chr18 33599428 33599710 -52389224 - AluY SINE Alu -9 302 21 383 192 40 20 chr18 33600369 33600468 -52388466 + MLT1I LTR MaLR 305 405 -4 206 88 59 0 chr18 33600999 33601033 -52387901 + CT-rich Low_complexity Low_complexity 4 39 0 207 0 0 0 chr18 33601048 33601071 -52387863 + (T)n Simple_repeat Simple_repeat 1 23 0 783 158 38 15 chr18 33602531 33602664 -52386270 - AluSq/x SINE Alu -177 136 1 192 77 0 0 chr18 33604595 33604621 -52384313 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 1787 156 11 7 chr18 33604621 33604904 -52384030 - AluJb SINE Alu -28 284 1 253 240 58 39 chr18 33605101 33605255 -52383679 - L1ME LINE L1 -212 5909 5753 374 258 65 137 chr18 33605446 33605694 -52383240 + MIR SINE MIR 2 231 -31 685 256 34 52 chr18 33606594 33606828 -52382106 + MIR SINE MIR 11 240 -22 * 1138 363 57 14 chr18 33606813 33607433 -52381501 + L3 LINE CR1 170 815 -762 461 289 108 95 chr18 33607672 33607997 -52380937 + L3 LINE CR1 903 1231 -346 215 327 53 35 chr18 33608144 33608257 -52380677 + L3 LINE CR1 1307 1421 -156 377 301 153 59 chr18 33609077 33609313 -52379621 - MIR SINE MIR 0 262 5 1597 178 3 40 chr18 33609586 33609889 -52379045 - AluJo SINE Alu -18 294 3 781 128 30 30 chr18 33609950 33610083 -52378851 + MER1B DNA MER1_type 206 338 -1 185 311 33 0 chr18 33610376 33610437 -52378497 + MIR SINE MIR 194 256 -6 221 336 133 16 chr18 33610486 33610614 -52378320 + MIR SINE MIR 61 203 -59 1725 190 14 6 chr18 33615934 33616282 -52372652 - L1MB7 LINE L1 -42 6142 5792 9650 151 26 9 chr18 33621229 33621427 -52367507 - Tigger1 DNA MER2_type 0 2418 2225 1504 196 3 24 chr18 33621427 33621718 -52367216 + AluJo SINE Alu 2 286 -26 9650 151 26 9 chr18 33621718 33623147 -52365787 - Tigger1 DNA MER2_type -193 2225 764 1703 157 20 7 chr18 33623147 33623441 -52365493 - Tigger1 DNA MER2_type -2119 299 2 315 49 0 0 chr18 33624178 33624219 -52364715 + (TG)n Simple_repeat Simple_repeat 2 42 0 1515 208 8 63 chr18 33624390 33624785 -52364149 - MLT1A2 LTR MaLR 0 374 2 1940 145 3 0 chr18 33625001 33625297 -52363637 + AluSx SINE Alu 3 299 -13 228 343 57 9 chr18 33626383 33626488 -52362446 - L2 LINE L2 -5 3267 3158 521 277 116 13 chr18 33626788 33627012 -52361922 - MIR SINE MIR 0 262 16 280 315 11 11 chr18 33628914 33629003 -52359931 - MIR3 SINE MIR -27 181 93 407 86 0 0 chr18 33629198 33629256 -52359678 - MADE1 DNA Mariner -22 58 1 21 0 0 0 chr18 33629759 33629780 -52359154 + AT_rich Low_complexity Low_complexity 1 21 0 583 293 58 26 chr18 33630313 33630721 -52358213 - MLT1J LTR MaLR -41 470 3 256 329 53 53 chr18 33631153 33631331 -52357603 + MIR SINE MIR 29 211 -51 1540 211 3 7 chr18 33631665 33631969 -52356965 + AluJo SINE Alu 1 303 -9 199 382 142 38 chr18 33632872 33633084 -52355850 + L2 LINE L2 3034 3267 -5 589 278 31 15 chr18 33635837 33636048 -52352886 - MIR SINE MIR -6 256 44 27 49 0 0 chr18 33637629 33637670 -52351264 + AT_rich Low_complexity Low_complexity 1 41 0 277 287 81 76 chr18 33639212 33639435 -52349499 + L1ME LINE L1 5527 5750 -412 648 264 35 17 chr18 33639446 33639620 -52349314 - MER5B DNA MER1_type 0 178 2 26 0 0 0 chr18 33639719 33639745 -52349189 + AT_rich Low_complexity Low_complexity 1 26 0 233 324 62 27 chr18 33640948 33641173 -52347761 + L1ME LINE L1 5561 5793 -328 2158 100 3 13 chr18 33641354 33641653 -52347281 + AluSc SINE Alu 6 301 -8 469 297 68 27 chr18 33642283 33642545 -52346389 - L1MC/D LINE L1 -476 5686 5465 303 218 35 11 chr18 33643182 33643269 -52345665 - MLT1K LTR MaLR -162 426 338 456 77 0 0 chr18 33644093 33644158 -52344776 + (CAA)n Simple_repeat Simple_repeat 1 65 0 1248 153 53 18 chr18 33644529 33644757 -52344177 - MER46A DNA MER2_type 0 236 1 24 32 0 0 chr18 33645395 33645426 -52343508 + AT_rich Low_complexity Low_complexity 1 31 0 209 154 0 77 chr18 33645773 33645825 -52343109 + L2 LINE L2 3266 3313 0 316 170 30 30 chr18 33645893 33646028 -52342906 + (TA)n Simple_repeat Simple_repeat 2 136 0 689 205 0 0 chr18 33646028 33646150 -52342784 - FLAM_C SINE Alu -21 122 1 497 307 142 5 chr18 33646415 33646633 -52342301 + MIR SINE MIR 11 258 -4 25 31 0 0 chr18 33646787 33646819 -52342115 + AT_rich Low_complexity Low_complexity 1 32 0 756 271 61 13 chr18 33646927 33647156 -52341778 - MIR SINE MIR -3 259 20 230 164 33 16 chr18 33648026 33648087 -52340847 + (TA)n Simple_repeat Simple_repeat 1 62 0 24 32 0 0 chr18 33648558 33648589 -52340345 + AT_rich Low_complexity Low_complexity 1 31 0 23 92 0 0 chr18 33648758 33648823 -52340111 + AT_rich Low_complexity Low_complexity 1 65 0 21 0 0 0 chr18 33649935 33649956 -52338978 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 33650787 33650815 -52338119 + AT_rich Low_complexity Low_complexity 1 28 0 30 0 0 0 chr18 33652565 33652595 -52336339 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr18 33653323 33653351 -52335583 + AT_rich Low_complexity Low_complexity 1 28 0 5967 282 92 42 chr18 33655457 33658392 -52330542 - L2 LINE L2 -10 3303 218 216 231 0 46 chr18 33659205 33659270 -52329664 + GA-rich Low_complexity Low_complexity 5 66 0 313 358 66 36 chr18 33661420 33661722 -52327212 - L3b LINE CR1 -19 1564 1254 283 273 11 23 chr18 33663779 33663867 -52325067 + L2 LINE L2 3225 3311 -2 21 0 0 0 chr18 33664374 33664395 -52324539 + AT_rich Low_complexity Low_complexity 1 21 0 509 263 116 49 chr18 33667840 33668064 -52320870 + MIR SINE MIR 3 241 -21 248 317 96 10 chr18 33669139 33669243 -52319691 - MIR SINE MIR -79 183 71 564 285 55 10 chr18 33670097 33670297 -52318637 + MIR SINE MIR 28 236 -26 210 265 24 12 chr18 33671704 33671787 -52317147 + (TATATG)n Simple_repeat Simple_repeat 3 86 0 642 294 43 9 chr18 33671874 33672085 -52316849 - MIR SINE MIR -36 226 9 196 354 15 0 chr18 33672177 33672242 -52316692 + MIR SINE MIR 2 67 -195 263 241 17 0 chr18 33674151 33674209 -52314725 - MER91 DNA MER1_type 0 190 132 281 281 106 60 chr18 33675386 33675603 -52313331 + L2 LINE L2 2973 3199 -114 1916 141 0 7 chr18 33675953 33676243 -52312691 + AluSx SINE Alu 23 310 -2 194 0 39 0 chr18 33676683 33676709 -52312225 + (CA)n Simple_repeat Simple_repeat 2 28 0 2073 93 42 0 chr18 33681161 33681450 -52307484 - AluSq SINE Alu -12 301 1 350 355 112 15 chr18 33681769 33681966 -52306968 - MIR SINE MIR -23 239 24 2409 61 0 3 chr18 33682410 33682705 -52306229 - AluY SINE Alu -17 294 1 186 343 93 29 chr18 33682780 33682920 -52306014 + L2 LINE L2 3122 3270 -2 2427 62 7 0 chr18 33683731 33684035 -52304899 + AluY SINE Alu 1 306 -5 190 286 127 63 chr18 33684742 33684868 -52304066 + L2 LINE L2 3176 3309 -4 301 248 85 46 chr18 33684997 33685150 -52303784 - HAL1b LINE L1 -1 1347 1189 31 88 0 0 chr18 33685175 33685255 -52303679 + AT_rich Low_complexity Low_complexity 1 80 0 602 263 141 13 chr18 33685256 33685568 -52303366 - HAL1b LINE L1 -336 1012 661 1225 232 47 11 chr18 33685690 33685850 -52303084 - AluJo SINE Alu -25 287 111 368 20 20 0 chr18 33685850 33685899 -52303035 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 1225 232 47 11 chr18 33685899 33686014 -52302920 - AluJo SINE Alu -201 111 2 282 296 15 69 chr18 33688401 33688736 -52300198 - L1MEd LINE L1 -3667 2548 2232 401 278 122 112 chr18 33689249 33689829 -52299105 - L1MEd LINE L1 -915 1661 932 919 283 5 0 chr18 33689865 33690088 -52298846 - MER58A DNA MER1_type 0 224 1 257 315 68 7 chr18 33690169 33690315 -52298619 - L1MEd LINE L1 -5357 848 694 1370 194 24 34 chr18 33690341 33690634 -52298300 - AluJb SINE Alu -17 295 6 295 347 24 36 chr18 33692835 33693002 -52295932 - L2 LINE L2 -536 2778 2614 210 313 10 73 chr18 33693298 33693356 -52295578 + L2 LINE L2 3183 3234 -38 2272 170 41 5 chr18 33693356 33693767 -52295167 - MSTB LTR MaLR 0 426 1 210 313 10 73 chr18 33693767 33693804 -52295130 + L2 LINE L2 3234 3272 0 267 388 46 5 chr18 33694689 33694885 -52294049 - L2 LINE L2 -632 2682 2479 236 297 0 11 chr18 33695594 33695685 -52293249 - MLT1L LTR MaLR -23 592 503 394 306 31 25 chr18 33695865 33696025 -52292909 - MLT1K LTR MaLR -317 271 111 2054 119 10 3 chr18 33696778 33697081 -52291853 - AluSx SINE Alu -7 305 1 2368 220 161 97 chr18 33697086 33697802 -52291132 - L1MC4 LINE L1 -208 7834 7165 579 183 8 48 chr18 33697802 33697950 -52290984 - FLAM_C SINE Alu 0 143 1 2368 220 161 97 chr18 33697950 33698531 -52290403 - L1MC4 LINE L1 -877 7165 6443 486 344 45 50 chr18 33699312 33699649 -52289285 - L2 LINE L2 0 3272 2938 286 332 84 26 chr18 33699669 33699859 -52289075 - MIR SINE MIR -42 220 20 500 273 190 35 chr18 33700135 33700535 -52288399 + L2 LINE L2 2850 3311 -2 808 206 32 7 chr18 33700636 33700918 -52288016 - MLT1B LTR MaLR 0 390 4 21 0 0 0 chr18 33703241 33703262 -52285672 + AT_rich Low_complexity Low_complexity 1 21 0 362 361 8 8 chr18 33705031 33705164 -52283770 - L2 LINE L2 -4 3309 3177 769 260 151 35 chr18 33705254 33705509 -52283425 - L1MEd LINE L1 -5673 723 408 759 184 0 0 chr18 33705509 33705634 -52283300 + FLAM_C SINE Alu 1 125 -8 769 260 151 35 chr18 33705634 33705755 -52283179 - L1MEd LINE L1 -5988 408 303 521 319 102 58 chr18 33705773 33705824 -52283110 - L2 LINE L2 -882 2432 2385 1326 246 8 32 chr18 33705824 33706198 -52282736 + MLT1A1 LTR MaLR 1 365 0 521 319 102 58 chr18 33706198 33706579 -52282355 - L2 LINE L2 -929 2385 1981 1319 227 119 54 chr18 33706662 33707275 -52281659 + L1M4b LINE L1 1105 1753 -5102 477 290 19 13 chr18 33707277 33707432 -52281502 - L2 LINE L2 -1350 1964 1809 26 50 0 0 chr18 33707646 33707686 -52281248 + AT_rich Low_complexity Low_complexity 1 40 0 305 297 67 107 chr18 33707757 33708366 -52280568 - L2 LINE L2 -1429 1885 1301 21 0 0 0 chr18 33708969 33708990 -52279944 + AT_rich Low_complexity Low_complexity 1 21 0 1399 242 88 36 chr18 33709007 33710320 -52278614 - L1M4 LINE L1 -1422 5535 1105 4097 230 67 38 chr18 33710683 33711750 -52277184 - L1M4 LINE L1 -5759 1100 4 22 35 0 0 chr18 33712881 33712910 -52276024 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr18 33713303 33713326 -52275608 + AT_rich Low_complexity Low_complexity 1 23 0 917 228 174 33 chr18 33713532 33713915 -52275019 - L1ME3A LINE L1 -9 6161 5723 1863 288 133 17 chr18 33714084 33716070 -52272864 - L1ME3A LINE L1 -461 5709 3474 461 243 93 7 chr18 33716132 33716272 -52272662 - L1MA10 LINE L1 -8 6326 6175 680 208 10 81 chr18 33716342 33716539 -52272395 - MER20 DNA MER1_type -29 190 8 21 57 0 0 chr18 33716616 33716651 -52272283 + AT_rich Low_complexity Low_complexity 1 35 0 2289 209 106 56 chr18 33716786 33717551 -52271383 + L1ME3A LINE L1 5360 6162 -8 2222 93 0 17 chr18 33717761 33718072 -52270862 + AluSp SINE Alu 1 306 0 198 171 0 0 chr18 33720485 33720526 -52268408 + (TATG)n Simple_repeat Simple_repeat 2 42 0 347 272 56 62 chr18 33720816 33721011 -52267923 - MLT1J LTR MaLR -317 194 1 2047 110 26 19 chr18 33721032 33721342 -52267592 - AluSx SINE Alu 0 312 1 669 314 98 32 chr18 33721388 33721917 -52267017 - MER20B DNA MER1_type -164 619 56 324 291 55 39 chr18 33722566 33722748 -52266186 - Charlie7 DNA MER1_type -2104 508 324 280 233 35 0 chr18 33724099 33724185 -52264749 - MER103 DNA DNA -69 97 9 303 351 42 30 chr18 33725184 33725412 -52263522 - MIR SINE MIR -13 249 19 1090 257 148 50 chr18 33726167 33726707 -52262227 - MLT1E LTR MaLR 0 593 1 382 282 69 8 chr18 33726740 33726871 -52262063 - MIR SINE MIR -15 247 109 213 269 58 19 chr18 33727200 33727252 -52261682 + L2 LINE L2 3169 3222 -50 2040 182 11 3 chr18 33727365 33727727 -52261207 + MLT1A1 LTR MaLR 1 365 0 273 151 38 19 chr18 33728033 33728086 -52260848 + L2 LINE L2 3219 3272 0 198 191 0 0 chr18 33729164 33729206 -52259728 + (TA)n Simple_repeat Simple_repeat 1 42 0 275 261 33 0 chr18 33729212 33729304 -52259630 + (TATATG)n Simple_repeat Simple_repeat 2 96 0 14420 137 21 18 chr18 33729532 33731943 -52256991 + Tigger1 DNA MER2_type 1 2418 0 28 0 0 0 chr18 33732007 33732035 -52256899 + AT_rich Low_complexity Low_complexity 1 28 0 355 392 66 25 chr18 33733122 33733831 -52255103 + L2 LINE L2 1957 2694 -620 1276 276 125 38 chr18 33733891 33734179 -52254755 + L2 LINE L2 2375 2636 -677 1139 189 48 26 chr18 33734179 33734492 -52254442 + MER33 DNA MER1_type 1 320 -4 1276 276 125 38 chr18 33734492 33734880 -52254054 + L2 LINE L2 2636 3097 -216 23 54 0 0 chr18 33735684 33735721 -52253213 + AT_rich Low_complexity Low_complexity 1 37 0 239 359 70 19 chr18 33736072 33736228 -52252706 + L2 LINE L2 259 422 -2892 189 299 82 21 chr18 33736544 33736641 -52252293 + L2 LINE L2 2607 2709 -605 374 358 41 31 chr18 33737636 33737868 -52251066 - MERVL LTR ERVL -362 5123 4884 1099 186 19 0 chr18 33737868 33738083 -52250851 + MER20 DNA MER1_type 1 219 0 374 358 41 31 chr18 33738083 33738264 -52250670 - MERVL LTR ERVL -601 4884 4706 253 229 0 125 chr18 33738516 33738612 -52250322 + L2 LINE L2 3229 3312 -1 244 274 0 0 chr18 33739600 33739651 -52249283 + polypyrimidine Low_complexity Low_complexity 5 55 0 1639 172 7 29 chr18 33740359 33740667 -52248267 + AluJb SINE Alu 1 301 -11 198 388 0 12 chr18 33741606 33741686 -52247248 + L2 LINE L2 3005 3083 -189 339 235 59 10 chr18 33743325 33743427 -52245507 + MER5A DNA MER1_type 83 189 0 282 364 27 0 chr18 33743583 33743693 -52245241 - L2 LINE L2 -1 3312 3200 484 248 47 16 chr18 33743772 33743901 -52245033 - MIR SINE MIR -46 216 84 21 0 0 0 chr18 33744703 33744724 -52244210 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr18 33745719 33745742 -52243192 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr18 33748751 33748772 -52240162 + AT_rich Low_complexity Low_complexity 1 21 0 601 136 29 0 chr18 33749075 33749178 -52239756 + L1MD1 LINE L1 6035 6140 -102 22 56 0 0 chr18 33749286 33749322 -52239612 + AT_rich Low_complexity Low_complexity 1 36 0 372 210 118 42 chr18 33749549 33749668 -52239266 + MIR3 SINE MIR 58 185 -23 191 244 26 77 chr18 33749969 33750047 -52238887 - MIR SINE MIR -61 201 128 189 408 87 0 chr18 33750145 33750248 -52238686 - MIR SINE MIR -76 132 21 316 294 0 0 chr18 33753684 33753769 -52235165 + C-rich Low_complexity Low_complexity 3 87 0 884 171 71 14 chr18 33760850 33761061 -52227873 - L1MA7 LINE L1 0 6291 6069 35 71 0 0 chr18 33762213 33762283 -52226651 + AT_rich Low_complexity Low_complexity 1 70 0 22 35 0 0 chr18 33762356 33762385 -52226549 + AT_rich Low_complexity Low_complexity 1 29 0 415 280 70 0 chr18 33762396 33762539 -52226395 - MIR SINE MIR -32 230 78 3113 119 60 6 chr18 33762967 33763453 -52225481 - LTR64 LTR ERVK -1 512 1 234 91 0 0 chr18 33765311 33765344 -52223590 + (T)n Simple_repeat Simple_repeat 1 33 0 475 290 61 47 chr18 33765857 33766136 -52222798 - L2 LINE L2 0 3313 3031 1675 168 47 55 chr18 33766136 33766517 -52222417 + MLT1B LTR MaLR 1 378 -12 875 217 6 0 chr18 33767150 33767311 -52221623 - FRAM SINE Alu -4 162 1 449 297 124 10 chr18 33767650 33767852 -52221082 + MIR SINE MIR 1 225 -37 220 237 289 0 chr18 33768127 33768203 -52220731 - MER5A DNA MER1_type 0 189 92 382 282 92 34 chr18 33768347 33768553 -52220381 + L1ME4a LINE L1 5701 5918 -203 2099 118 7 3 chr18 33768553 33768857 -52220077 - AluSx SINE Alu -7 305 1 392 303 73 30 chr18 33771779 33771944 -52216990 - MER5A DNA MER1_type 0 189 18 187 253 190 13 chr18 33773384 33773463 -52215471 + MIR SINE MIR 38 130 -78 415 85 59 8 chr18 33773625 33773743 -52215191 + (TA)n Simple_repeat Simple_repeat 1 124 0 229 183 24 37 chr18 33773743 33773825 -52215109 + (TATAA)n Simple_repeat Simple_repeat 4 84 0 192 48 71 0 chr18 33773838 33773880 -52215054 + (TA)n Simple_repeat Simple_repeat 1 45 0 2697 202 58 13 chr18 33773880 33774500 -52214434 - L1MC3 LINE L1 -24 8179 7532 820 251 96 8 chr18 33774505 33774744 -52214190 - MLT1C LTR MaLR -6 461 202 3634 47 0 0 chr18 33774764 33775210 -52213724 - L1PA3 LINE L1 0 6155 5710 4338 22 0 1 chr18 33775210 33776077 -52212857 + L1P2 LINE L1 4882 5747 -408 554 241 78 12 chr18 33776077 33776243 -52212691 - MLT1C LTR MaLR -311 194 18 6975 208 110 65 chr18 33776263 33778828 -52210106 - L1MC3 LINE L1 -669 7534 4753 203 61 30 0 chr18 33778828 33778861 -52210073 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6975 208 110 65 chr18 33778861 33779760 -52209174 - L1MC3 LINE L1 -3450 4753 3896 476 238 36 36 chr18 33779763 33779956 -52208978 - L1MC3 LINE L1 -5128 917 725 * 13913 35 2 3 chr18 33779947 33781659 -52207275 - L1PA4 LINE L1 -1355 4791 3081 7523 31 2 0 chr18 33781659 33783009 -52205925 + L1PA4 LINE L1 4803 6155 0 1628 245 92 66 chr18 33783030 33783727 -52205207 - L1MC3 LINE L1 -5328 717 3 714 349 73 51 chr18 33785179 33786404 -52202530 - L2 LINE L2 -9 3263 2011 2051 130 0 10 chr18 33786620 33786921 -52202013 + AluSg SINE Alu 3 300 -10 576 303 38 14 chr18 33787634 33787845 -52201089 + MIR SINE MIR 1 216 -46 224 289 133 0 chr18 33787858 33787948 -52200986 + L2 LINE L2 3143 3244 -28 2037 172 70 12 chr18 33788311 33788712 -52200222 - MSTA LTR MaLR 0 428 5 200 297 259 11 chr18 33790286 33790471 -52198463 - MIR SINE MIR -30 232 2 25 31 0 0 chr18 33791082 33791114 -52197820 + AT_rich Low_complexity Low_complexity 1 32 0 42 20 0 0 chr18 33791133 33791182 -52197752 + AT_rich Low_complexity Low_complexity 1 49 0 187 221 35 81 chr18 33791702 33791788 -52197146 - MIR3 SINE MIR -42 166 85 394 291 93 63 chr18 33792146 33792913 -52196021 + L1ME2 LINE L1 789 1578 -4818 274 265 144 23 chr18 33793014 33793146 -52195788 + L1MCc LINE L1 346 493 -5930 11742 44 4 0 chr18 33793223 33794690 -52194244 + L1PA4 LINE L1 3750 5222 -924 * 44102 40 2 1 chr18 33794666 33800793 -52188141 + L1PA3 LINE L1 1 6129 -26 212 57 0 29 chr18 33800795 33800830 -52188104 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 7064 36 18 1 chr18 33800830 33801793 -52187141 + L1PA4 LINE L1 5183 6160 0 25 0 0 0 chr18 33801837 33801862 -52187072 + AT_rich Low_complexity Low_complexity 1 25 0 2352 139 35 48 chr18 33802057 33802266 -52186668 + MSTB1 LTR MaLR 6 216 -216 2148 69 16 85 chr18 33802266 33802583 -52186351 - AluSp SINE Alu -18 295 1 2352 139 35 48 chr18 33802583 33802806 -52186128 + MSTB1 LTR MaLR 216 432 0 1189 228 91 7 chr18 33802879 33803287 -52185647 - L1M4 LINE L1 -1459 4687 4246 1655 303 47 8 chr18 33803402 33803934 -52185000 - ERVL LTR ERVL -1082 4682 4130 3768 310 91 34 chr18 33803963 33804743 -52184191 - ERVL LTR ERVL -1631 4023 3289 380 0 67 0 chr18 33804743 33804803 -52184131 + (TA)n Simple_repeat Simple_repeat 2 65 0 3768 310 91 34 chr18 33804803 33806185 -52182749 - ERVL LTR ERVL -2365 3289 1762 660 281 142 49 chr18 33806260 33806670 -52182264 - LTR41 LTR ERVL -10 763 316 550 221 40 34 chr18 33806693 33806842 -52182092 - LTR41 LTR ERVL -623 150 1 331 202 61 50 chr18 33807001 33807100 -52181834 + L1ME2 LINE L1 2079 2178 -4218 1567 247 41 20 chr18 33807151 33807641 -52181293 + L1ME2 LINE L1 5726 6225 -8 2471 109 3 32 chr18 33809504 33809879 -52179055 - THE1B LTR MaLR 0 364 1 363 258 116 74 chr18 33812236 33812426 -52176508 + MIR SINE MIR 54 251 -11 395 323 99 0 chr18 33813555 33813756 -52175178 + MIR SINE MIR 16 236 -26 2107 121 7 0 chr18 33813876 33814174 -52174760 - AluSg SINE Alu -10 300 1 21 0 0 0 chr18 33815046 33815067 -52173867 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr18 33816518 33816539 -52172395 + AT_rich Low_complexity Low_complexity 1 21 0 29 47 0 0 chr18 33816566 33816609 -52172325 + AT_rich Low_complexity Low_complexity 1 43 0 2842 256 46 51 chr18 33816670 33817661 -52171273 + L1MCa LINE L1 4 950 -5095 1057 132 132 0 chr18 33817664 33817944 -52170990 + L1MCa LINE L1 1281 1597 -4967 1187 196 0 56 chr18 33817960 33818230 -52170704 + AluJb SINE Alu 42 296 -16 915 195 87 34 chr18 33818230 33818415 -52170519 + L1M2 LINE L1 1732 1906 -4521 336 102 0 0 chr18 33818415 33818464 -52170470 + (TA)n Simple_repeat Simple_repeat 2 50 0 915 195 87 34 chr18 33818464 33818591 -52170343 + L1M2 LINE L1 1906 2186 -4241 2098 230 34 38 chr18 33818648 33819191 -52169743 + L1MCa LINE L1 2293 2831 -3733 2763 39 0 9 chr18 33819191 33819528 -52169406 + L1PA4 LINE L1 5819 6152 -3 2098 230 34 38 chr18 33819528 33819913 -52169021 + L1MCa LINE L1 2831 3216 -3348 1266 201 53 84 chr18 33819917 33820311 -52168623 - MSTB2 LTR MaLR -4 453 72 2226 231 66 25 chr18 33820342 33821097 -52167837 + L1MCa LINE L1 3666 4451 -2113 1738 198 23 20 chr18 33821206 33821559 -52167375 - MLT1A1 LTR MaLR -11 354 1 446 205 292 22 chr18 33821684 33821869 -52167065 - LTR33 LTR ERVL -273 248 14 2003 231 75 17 chr18 33822867 33823538 -52165396 - L1MD3 LINE L1 0 7808 7047 13853 161 22 16 chr18 33823538 33825628 -52163306 + ERVL-B1 LTR ERVL 3349 5457 -307 195 114 0 0 chr18 33825628 33825663 -52163271 + (TA)n Simple_repeat Simple_repeat 2 36 0 13853 161 22 16 chr18 33825663 33825966 -52162968 + ERVL-B1 LTR ERVL 5457 5757 -7 1102 210 33 54 chr18 33825966 33826354 -52162580 + MLT2B1 LTR ERVL 1 439 -81 26 30 0 0 chr18 33826499 33826532 -52162402 + AT_rich Low_complexity Low_complexity 1 33 0 4232 187 217 35 chr18 33827002 33828438 -52160496 - pTR5 LTR ERV1 0 2438 742 1646 210 55 80 chr18 33828583 33829036 -52159898 + MLT2B2 LTR ERVL 72 513 -2 21 0 0 0 chr18 33829125 33829146 -52159788 + AT_rich Low_complexity Low_complexity 1 21 0 212 146 0 42 chr18 33830207 33830255 -52158679 + (CCCTA)n Simple_repeat Simple_repeat 1 46 0 394 215 31 85 chr18 33830641 33830771 -52158163 + MLT1J LTR MaLR 124 246 -265 385 280 93 7 chr18 33830831 33830981 -52157953 + MLT1J LTR MaLR 347 509 -2 307 321 92 0 chr18 33830992 33831101 -52157833 + L2 LINE L2 3139 3257 -15 2030 121 3 13 chr18 33831351 33831649 -52157285 - AluSx SINE Alu -17 295 1 184 394 25 35 chr18 33831909 33832107 -52156827 - L2 LINE L2 -746 2568 2373 430 300 84 78 chr18 33832221 33832568 -52156366 - L2 LINE L2 -1217 2097 1749 333 199 76 76 chr18 33832923 33833054 -52155880 - MLT1J LTR MaLR -154 357 227 500 355 36 65 chr18 33833382 33834015 -52154919 - L2 LINE L2 -1984 1330 716 525 350 101 43 chr18 33835452 33836386 -52152548 - L1 LINE L1 -1095 5051 4064 2928 237 94 60 chr18 33838114 33838768 -52150166 - L1MCb LINE L1 -4229 2335 1705 2299 99 0 10 chr18 33838768 33839072 -52149862 + AluY SINE Alu 1 301 -10 2928 237 94 60 chr18 33839072 33839570 -52149364 - L1MCb LINE L1 -4859 1705 1226 2109 134 0 0 chr18 33839570 33839875 -52149059 + AluSx SINE Alu 1 305 -7 225 0 0 0 chr18 33839875 33839900 -52149034 + (CA)n Simple_repeat Simple_repeat 2 26 0 2928 237 94 60 chr18 33839900 33840062 -52148872 - L1MCb LINE L1 -5338 1226 1071 1615 216 35 14 chr18 33840062 33840428 -52148506 - MLT1A2 LTR MaLR 0 374 1 2928 237 94 60 chr18 33840428 33841341 -52147593 - L1MCb LINE L1 -5493 1071 3 872 137 36 114 chr18 33841412 33841631 -52147303 - L1MA9 LINE L1 -22 6290 6089 222 62 0 0 chr18 33841975 33842007 -52146927 + (TG)n Simple_repeat Simple_repeat 1 32 0 211 393 0 0 chr18 33842532 33842621 -52146313 + L2 LINE L2 2653 2741 -573 425 88 0 0 chr18 33842983 33843040 -52145894 + Alu SINE Alu 1 57 -261 * 629 158 0 35 chr18 33843035 33843149 -52145785 - AluSc SINE Alu -103 206 97 298 98 0 0 chr18 33843149 33843233 -52145701 + Alu SINE Alu 243 326 0 208 265 88 0 chr18 33843264 33843332 -52145602 + MIR SINE MIR 124 197 -65 3327 189 60 27 chr18 33843910 33844609 -52144325 + MER72 LTR ERV1 1 722 0 833 275 27 18 chr18 33845881 33846103 -52142831 - MIR SINE MIR -29 233 10 31 0 0 0 chr18 33846775 33846806 -52142128 + AT_rich Low_complexity Low_complexity 1 31 0 350 288 42 57 chr18 33847666 33847878 -52141056 - L2 LINE L2 -11 3302 3094 200 331 132 0 chr18 33848095 33848231 -52140703 + MIR SINE MIR 82 235 -27 1063 233 5 18 chr18 33848267 33848486 -52140448 - MER58A DNA MER1_type -8 216 1 641 160 42 8 chr18 33849197 33849316 -52139618 + AluSg/x SINE Alu 181 303 -7 382 298 88 18 chr18 33849954 33850152 -52138782 + MIR SINE MIR 37 258 -4 1189 172 128 143 chr18 33850152 33850676 -52138258 - MER4C LTR ERV1 0 465 17 270 0 0 0 chr18 33850680 33850710 -52138224 + (TG)n Simple_repeat Simple_repeat 2 31 0 296 146 0 39 chr18 33850747 33850850 -52138084 + (TA)n Simple_repeat Simple_repeat 2 100 0 325 246 40 3 chr18 33850851 33850958 -52137976 + L1MC4 LINE L1 6614 6700 -1342 2104 90 0 4 chr18 33850958 33851226 -52137708 - AluSc SINE Alu -42 267 1 328 318 18 0 chr18 33851437 33851547 -52137387 + MIR SINE MIR 21 132 -130 212 167 0 0 chr18 33852279 33852321 -52136613 + A-rich Low_complexity Low_complexity 2 43 0 186 43 0 0 chr18 33853696 33853719 -52135215 + (TTTAG)n Simple_repeat Simple_repeat 3 25 0 229 282 182 0 chr18 33854836 33854946 -52133988 + L2 LINE L2 3182 3311 -2 1400 198 66 66 chr18 33856003 33856398 -52132536 + MLT1D LTR MaLR 5 399 -106 305 259 250 21 chr18 33856518 33856754 -52132180 + L1ME4a LINE L1 5830 6119 -2 243 327 109 24 chr18 33857495 33857660 -52131274 + MIR SINE MIR 13 191 -71 25 31 0 0 chr18 33859992 33860024 -52128910 + AT_rich Low_complexity Low_complexity 1 32 0 204 40 0 0 chr18 33860073 33860098 -52128836 + (T)n Simple_repeat Simple_repeat 1 25 0 205 398 11 0 chr18 33861156 33861244 -52127690 - MIR SINE MIR -133 129 41 21 82 0 0 chr18 33861519 33861568 -52127366 + AT_rich Low_complexity Low_complexity 1 49 0 206 205 0 0 chr18 33863455 33863494 -52125440 + CT-rich Low_complexity Low_complexity 1 39 0 206 364 25 0 chr18 33863701 33863819 -52125115 + L2 LINE L2 3193 3313 0 6613 210 63 15 chr18 33864324 33865983 -52122951 - Cheshire DNA MER1_type 0 2420 682 326 306 109 48 chr18 33866213 33866543 -52122391 - L1M4 LINE L1 -2373 3773 3424 28 61 0 0 chr18 33866599 33866648 -52122286 + AT_rich Low_complexity Low_complexity 1 49 0 225 287 46 19 chr18 33867138 33867246 -52121688 - L1M4 LINE L1 -3584 2562 2452 1820 148 40 35 chr18 33867248 33867285 -52121649 - THE1C LTR MaLR 0 375 340 1948 155 3 0 chr18 33867285 33867594 -52121340 + AluSx SINE Alu 1 310 -2 1820 148 40 35 chr18 33867594 33867927 -52121007 - THE1C LTR MaLR -35 340 3 965 137 63 17 chr18 33867927 33868102 -52120832 - THE1C-int LTR MaLR -1 1579 1397 * 8750 50 0 5 chr18 33868089 33869205 -52119729 - L1P LINE L1 -1807 4339 3230 9072 35 1 0 chr18 33869205 33871082 -52117852 + L1PA3 LINE L1 4278 6155 0 7354 132 107 10 chr18 33871082 33872356 -52116578 - THE1C-int LTR MaLR -181 1399 3 1918 175 30 19 chr18 33872358 33872729 -52116205 - THE1C LTR MaLR 0 375 1 1065 168 66 0 chr18 33872827 33873024 -52115910 + MER2 DNA MER2_type 1 210 -135 183 359 16 0 chr18 33874784 33874848 -52114086 - MIR SINE MIR -151 111 47 279 0 0 0 chr18 33875298 33875329 -52113605 + (CA)n Simple_repeat Simple_repeat 2 32 0 1771 226 15 50 chr18 33875345 33875683 -52113251 - MLT2B1 LTR ERVL -76 444 125 1310 194 55 27 chr18 33875683 33875976 -52112958 - AluJo SINE Alu -7 305 5 1771 226 15 50 chr18 33875976 33876097 -52112837 - MLT2B1 LTR ERVL -395 125 1 387 0 0 0 chr18 33876298 33876341 -52112593 + (CA)n Simple_repeat Simple_repeat 1 43 0 23 0 0 0 chr18 33876784 33876807 -52112127 + AT_rich Low_complexity Low_complexity 1 23 0 767 171 59 0 chr18 33877688 33877858 -52111076 - L1MA8 LINE L1 0 6291 6112 1107 179 47 39 chr18 33877859 33878116 -52110818 + L1MA8 LINE L1 5861 6119 -172 579 261 136 0 chr18 33880259 33880443 -52108491 + MER3 DNA MER1_type 1 209 0 223 314 103 13 chr18 33881655 33881811 -52107123 - L2 LINE L2 -948 2366 2197 355 329 34 24 chr18 33882204 33882411 -52106523 - L2 LINE L2 -1342 1972 1764 382 284 95 9 chr18 33883402 33883518 -52105416 - L2 LINE L2 0 3313 3188 704 184 17 106 chr18 33884880 33885059 -52103875 + AluJo SINE Alu 47 209 -103 198 0 0 0 chr18 33885087 33885109 -52103825 + (A)n Simple_repeat Simple_repeat 1 22 0 321 235 25 84 chr18 33885154 33885273 -52103661 + MIR3 SINE MIR 87 198 -10 240 59 0 0 chr18 33885468 33885502 -52103432 + (TG)n Simple_repeat Simple_repeat 1 34 0 292 286 91 59 chr18 33885602 33885822 -52103112 - L2 LINE L2 -445 2869 2643 544 285 29 0 chr18 33886081 33886218 -52102716 + MER45A DNA AcHobo 30 170 -8 1012 293 96 35 chr18 33886999 33887039 -52101895 - L1MC4a LINE L1 -1947 5861 5825 1563 191 0 30 chr18 33887039 33887342 -52101592 + AluSx SINE Alu 1 294 -18 1012 293 96 35 chr18 33887342 33887864 -52101070 - L1MC4a LINE L1 -1983 5825 5265 315 0 0 0 chr18 33887955 33887990 -52100944 + (TG)n Simple_repeat Simple_repeat 2 36 0 230 277 108 0 chr18 33888154 33888219 -52100715 + MER63 DNA MER1_type 989 1060 0 222 105 0 0 chr18 33888686 33888724 -52100210 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 3693 14 0 0 chr18 33888726 33889147 -52099787 - L1PA3 LINE L1 -1705 4441 4021 8047 27 2 0 chr18 33889147 33890867 -52098067 + L1PA3 LINE L1 4434 6155 0 1589 235 33 16 chr18 33891327 33891757 -52097177 + L1MB1 LINE L1 5710 6146 -22 200 311 0 11 chr18 33891861 33891951 -52096983 + CT-rich Low_complexity Low_complexity 2 90 0 6739 115 10 13 chr18 33892932 33893895 -52095039 + L1MA1 LINE L1 5101 6060 -242 2364 98 0 0 chr18 33893895 33894202 -52094732 + AluSx SINE Alu 1 307 -5 6739 115 10 13 chr18 33894202 33894429 -52094505 + L1MA1 LINE L1 6060 6286 -16 318 256 22 22 chr18 33894444 33894534 -52094400 - L1MC4 LINE L1 -1339 6703 6614 251 113 19 0 chr18 33894540 33894593 -52094341 + (TA)n Simple_repeat Simple_repeat 2 55 0 313 301 11 0 chr18 33894595 33894688 -52094246 - L1MC4 LINE L1 -1337 6705 6612 307 253 32 21 chr18 33894696 33894791 -52094143 + L1MC4 LINE L1 6610 6705 -1337 231 152 22 0 chr18 33894791 33894837 -52094097 + (TA)n Simple_repeat Simple_repeat 1 47 0 21 57 0 0 chr18 33894842 33894877 -52094057 + AT_rich Low_complexity Low_complexity 1 35 0 7035 48 8 0 chr18 33895070 33896544 -52092390 - L1PA6 LINE L1 0 6154 4678 11984 69 11 11 chr18 33896544 33898196 -52090738 + L1PA6 LINE L1 3014 4665 -1481 31 0 0 0 chr18 33898693 33898724 -52090210 + AT_rich Low_complexity Low_complexity 1 31 0 1481 206 11 11 chr18 33899798 33900121 -52088813 + AluJo SINE Alu 1 323 0 1702 166 10 26 chr18 33900300 33900608 -52088326 - AluJo SINE Alu -5 307 5 1778 161 24 40 chr18 33902390 33902770 -52086164 + L1MA7 LINE L1 5912 6285 -6 6656 183 19 2 chr18 33903314 33905420 -52083514 + L1PA14 LINE L1 3999 6158 -3 1560 192 21 18 chr18 33905574 33905860 -52083074 - AluJo SINE Alu -25 287 1 234 283 22 43 chr18 33905942 33906034 -52082900 + L2 LINE L2 2180 2269 -1045 2099 254 14 45 chr18 33906559 33907111 -52081823 + MER87 LTR ERV1 1 535 -6 5892 153 36 69 chr18 33907526 33907687 -52081247 + LTR57-int LTR ERVL 303 468 -4875 2075 160 93 0 chr18 33907687 33908075 -52080859 - MSTB LTR MaLR -2 424 1 5892 153 36 69 chr18 33908075 33909251 -52079683 + LTR57-int LTR ERVL 468 1596 -3747 5441 169 49 68 chr18 33908466 33910672 -52078262 + MER49-int LTR ERV1 786 4160 -2171 * 1582 143 71 32 chr18 33910761 33911069 -52077865 - THE1C LTR MaLR -55 320 1 863 141 11 103 chr18 33911083 33911268 -52077666 + MER49-int LTR ERV1 3786 3953 -4167 961 197 35 35 chr18 33911469 33911667 -52077267 + MER49-int LTR ERV1 5939 6136 -622 * 1573 178 7 13 chr18 33911666 33911976 -52076958 + MER49-int LTR ERV1 6443 7097 -4 1440 159 43 29 chr18 33911979 33912256 -52076678 + MER49 LTR ERV1 1 281 -642 698 194 52 0 chr18 33912244 33912378 -52076556 + MER49 LTR ERV1 611 751 -172 * 558 296 82 61 chr18 33912566 33913130 -52075804 + LOR1-int LTR ERV1 4965 7672 -448 1926 239 37 33 chr18 33913613 33914152 -52074782 + MER87 LTR ERV1 1 541 0 2410 73 0 3 chr18 33914688 33914990 -52073944 + AluY SINE Alu 1 301 -10 28 0 0 0 chr18 33916665 33916693 -52072241 + AT_rich Low_complexity Low_complexity 1 28 0 455 360 29 59 chr18 33916925 33917300 -52071634 + L2 LINE L2 2153 2516 -798 411 310 76 70 chr18 33917335 33917664 -52071270 - L2 LINE L2 -19 3294 2964 495 249 86 35 chr18 33918118 33918315 -52070619 + LTR33 LTR ERVL 304 510 -11 440 267 50 54 chr18 33918422 33918643 -52070291 - HAL1 LINE L1 -481 2026 1807 698 266 64 66 chr18 33918681 33919319 -52069615 - HAL1 LINE L1 -939 1568 932 344 366 53 0 chr18 33919475 33919702 -52069232 - HAL1 LINE L1 -1940 567 329 303 288 31 94 chr18 33919820 33919980 -52068954 - HAL1 LINE L1 -2342 165 16 413 271 86 7 chr18 33920230 33920370 -52068564 + MIR SINE MIR 102 252 -10 223 256 35 47 chr18 33920339 33920425 -52068509 - L3 LINE CR1 -519 1058 974 * 216 391 43 9 chr18 33920529 33920644 -52068290 + L2 LINE L2 3180 3298 -15 318 345 92 91 chr18 33920662 33921236 -52067698 - L3 LINE CR1 -672 905 331 230 347 20 10 chr18 33921307 33921405 -52067529 - MIR SINE MIR -162 100 2 3233 296 99 28 chr18 33921566 33923282 -52065652 - L2 LINE L2 0 3313 1480 359 268 128 64 chr18 33923238 33923473 -52065461 + L3 LINE CR1 1200 1449 -128 * 262 260 112 71 chr18 33923503 33923672 -52065262 - MIR SINE MIR -22 240 65 22 0 0 0 chr18 33925134 33925156 -52063778 + AT_rich Low_complexity Low_complexity 1 22 0 1455 194 10 31 chr18 33925157 33925450 -52063484 - AluJo SINE Alu -25 287 1 27 81 0 0 chr18 33926638 33926700 -52062234 + AT_rich Low_complexity Low_complexity 1 62 0 216 123 18 35 chr18 33927812 33927869 -52061065 + GA-rich Low_complexity Low_complexity 2 57 0 3112 187 58 95 chr18 33928188 33929034 -52059900 + MLT1B-int LTR MaLR 550 1364 -7 1076 204 32 88 chr18 33929041 33929452 -52059482 + MLT1B LTR MaLR 1 388 -2 505 306 94 22 chr18 33929571 33929888 -52059046 + MLT1K LTR MaLR 125 541 -47 234 128 0 0 chr18 33933438 33933477 -52055457 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 213 337 53 21 chr18 33933497 33933592 -52055342 + MIR3 SINE MIR 105 202 -6 25 51 0 0 chr18 33933602 33933641 -52055293 + AT_rich Low_complexity Low_complexity 1 39 0 2342 98 0 0 chr18 33933728 33934034 -52054900 + AluSc SINE Alu 1 306 -3 2113 83 4 0 chr18 33934245 33934546 -52054388 - AluSc SINE Alu 0 302 1 264 346 79 53 chr18 33936962 33937228 -52051706 + L2 LINE L2 2953 3225 -47 205 243 29 97 chr18 33937216 33937319 -52051615 + MIR SINE MIR 157 252 -10 * 21 71 0 0 chr18 33937874 33937916 -52051018 + AT_rich Low_complexity Low_complexity 1 42 0 1267 276 80 71 chr18 33938915 33939099 -52049835 + MER20B DNA MER1_type 1 182 -601 1578 164 36 59 chr18 33939099 33939403 -52049531 + AluJo SINE Alu 3 299 -13 1267 276 80 71 chr18 33939403 33939994 -52048940 + MER20B DNA MER1_type 182 783 0 282 280 0 0 chr18 33940109 33940184 -52048750 + L1ME LINE L1 5584 5658 -463 223 355 21 43 chr18 33940360 33940501 -52048433 + MIR SINE MIR 18 155 -107 13510 144 20 24 chr18 33940691 33942511 -52046423 - Tigger1 DNA MER2_type 0 2418 610 1657 159 23 23 chr18 33942511 33942813 -52046121 - AluJo SINE Alu -10 302 1 13510 144 20 24 chr18 33942813 33943421 -52045513 - Tigger1 DNA MER2_type -1808 610 1 461 252 53 0 chr18 33945775 33945906 -52043028 + MIR SINE MIR 54 191 -71 21 0 0 0 chr18 33945955 33945976 -52042958 + AT_rich Low_complexity Low_complexity 1 21 0 9739 81 12 1 chr18 33946038 33947545 -52041389 - L1P3 LINE L1 -608 5546 4028 6506 45 10 0 chr18 33947545 33948370 -52040564 + L1PA7 LINE L1 5328 6169 0 188 255 21 0 chr18 33948588 33948635 -52040299 + L3 LINE CR1 1327 1374 -203 299 256 26 0 chr18 33948780 33948858 -52040076 - MIR SINE MIR -56 206 127 189 357 71 24 chr18 33948997 33949081 -52039853 + L3 LINE CR1 1484 1571 -6 769 325 12 12 chr18 33949226 33949469 -52039465 - MIR SINE MIR -13 249 7 23 0 0 0 chr18 33951332 33951355 -52037579 + AT_rich Low_complexity Low_complexity 1 23 0 329 331 115 0 chr18 33953447 33953604 -52035330 - MIR3 SINE MIR -2 206 32 533 312 37 14 chr18 33953942 33954160 -52034774 - MIR SINE MIR 0 262 40 217 315 87 11 chr18 33956378 33956470 -52032464 - L2 LINE L2 -17 3296 3198 690 317 52 10 chr18 33956552 33956861 -52032073 + MER46C DNA MER2_type 2 323 -15 490 328 93 24 chr18 33956960 33957292 -52031642 + MLT1K LTR MaLR 147 501 -87 22 0 0 0 chr18 33957621 33957643 -52031291 + AT_rich Low_complexity Low_complexity 1 22 0 287 158 35 0 chr18 33957833 33957890 -52031044 + U2 snRNA snRNA 1 59 -129 303 301 117 68 chr18 33958549 33958755 -52030179 - MIR SINE MIR -27 235 20 572 261 98 34 chr18 33959014 33959455 -52029479 - L1MEd LINE L1 -4907 1403 896 373 261 52 15 chr18 33959663 33959797 -52029137 - L1MEd LINE L1 -5934 185 47 2260 92 3 0 chr18 33960292 33960585 -52028349 + AluSp SINE Alu 2 295 -18 250 299 15 0 chr18 33960647 33960714 -52028220 + MER69 DNA AcHobo 1 68 -2458 351 246 25 34 chr18 33960900 33961018 -52027916 + MER69 DNA AcHobo 2410 2526 0 1473 203 62 9 chr18 33961683 33962008 -52026926 + MER2 DNA MER2_type 2 343 -1 218 186 0 0 chr18 33965357 33965400 -52023534 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 295 161 62 62 chr18 33966212 33966293 -52022641 - MER3 DNA MER1_type -50 159 79 230 184 0 0 chr18 33966290 33966328 -52022606 - MER3 DNA MER1_type -164 45 8 * 223 133 13 80 chr18 33966463 33966538 -52022396 + (TTATA)n Simple_repeat Simple_repeat 4 73 0 252 282 56 0 chr18 33967379 33967450 -52021484 - MIR SINE MIR -65 197 123 234 150 0 0 chr18 33967585 33967625 -52021309 + (TG)n Simple_repeat Simple_repeat 2 41 0 290 182 18 18 chr18 33968247 33968302 -52020632 - L2 LINE L2 -5 3308 3254 * 510 245 75 19 chr18 33968278 33968437 -52020497 - MIR SINE MIR -94 168 1 33 80 0 0 chr18 33968729 33968804 -52020130 + AT_rich Low_complexity Low_complexity 1 75 0 1512 204 151 55 chr18 33968805 33969276 -52019658 + MLT2B1 LTR ERVL 3 518 -2 330 283 105 20 chr18 33969712 33969864 -52019070 + MLT1K LTR MaLR 347 511 -77 206 283 0 0 chr18 33971819 33971872 -52017062 + L2 LINE L2 3218 3270 -2 426 99 0 63 chr18 33972083 33972194 -52016740 + (GAAA)n Simple_repeat Simple_repeat 3 106 0 784 206 74 0 chr18 33972233 33972408 -52016526 + MER5A DNA MER1_type 1 188 -1 365 296 79 45 chr18 33972410 33972852 -52016082 + L1MC5 LINE L1 7331 7787 -174 1177 189 11 75 chr18 33972857 33973137 -52015797 + AluJo SINE Alu 17 278 -34 2637 119 11 0 chr18 33973137 33973507 -52015427 + THE1C LTR MaLR 1 374 -1 36 40 0 0 chr18 33973628 33973678 -52015256 + AT_rich Low_complexity Low_complexity 1 50 0 299 256 181 25 chr18 33973791 33973951 -52014983 - MER69 DNA AcHobo -3 2523 2339 5496 205 23 33 chr18 33973953 33975336 -52013598 + L1 LINE L1 3998 5366 -780 283 289 0 0 chr18 33975436 33975512 -52013422 - MLT1A1 LTR MaLR -289 76 1 739 257 154 37 chr18 33975581 33975702 -52013232 + L1MEc LINE L1 303 408 -5988 771 184 0 0 chr18 33975702 33975827 -52013107 - FLAM_C SINE Alu -8 125 1 739 257 154 37 chr18 33975827 33976082 -52012852 + L1MEc LINE L1 408 723 -5673 363 258 116 74 chr18 33979734 33979924 -52009010 + MIR SINE MIR 54 251 -11 358 299 114 15 chr18 33981053 33981254 -52007680 + MIR SINE MIR 16 236 -26 2107 121 7 0 chr18 33981374 33981672 -52007262 - AluSg SINE Alu -10 300 1 21 0 0 0 chr18 33982544 33982565 -52006369 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr18 33984016 33984037 -52004897 + AT_rich Low_complexity Low_complexity 1 21 0 29 47 0 0 chr18 33984064 33984107 -52004827 + AT_rich Low_complexity Low_complexity 1 43 0 2842 256 46 51 chr18 33984168 33985159 -52003775 + L1MCa LINE L1 -134 812 -5095 1057 132 132 0 chr18 33985162 33985442 -52003492 + L1MCa LINE L1 1143 1459 -4967 1187 196 0 56 chr18 33985458 33985728 -52003206 + AluJb SINE Alu 42 296 -16 915 195 87 34 chr18 33985728 33985913 -52003021 + L1M2 LINE L1 1732 1906 -4521 336 102 0 0 chr18 33985913 33985962 -52002972 + (TA)n Simple_repeat Simple_repeat 1 49 0 915 195 87 34 chr18 33985962 33986089 -52002845 + L1M2 LINE L1 1906 2186 -4241 1174 208 46 51 chr18 33986146 33986669 -52002265 + L1MCa LINE L1 2155 2733 -3874 2768 41 0 9 chr18 33986689 33987029 -52001905 + L1PA4 LINE L1 5819 6155 0 1628 239 77 61 chr18 33987050 33987766 -52001168 - L1MCa LINE L1 -5328 717 3 714 349 73 51 chr18 33989199 33990424 -51998510 - L2 LINE L2 -9 3263 2011 2051 130 0 10 chr18 33990640 33990941 -51997993 + AluSg SINE Alu 3 300 -10 576 303 38 14 chr18 33991654 33991865 -51997069 + MIR SINE MIR 1 216 -46 224 289 133 0 chr18 33991878 33991968 -51996966 + L2 LINE L2 3143 3244 -28 2037 172 70 12 chr18 33992331 33992732 -51996202 - MSTA LTR MaLR 0 428 5 200 297 259 11 chr18 33994306 33994491 -51994443 - MIR SINE MIR -30 232 2 25 31 0 0 chr18 33995102 33995134 -51993800 + AT_rich Low_complexity Low_complexity 1 32 0 42 20 0 0 chr18 33995153 33995202 -51993732 + AT_rich Low_complexity Low_complexity 1 49 0 187 221 35 81 chr18 33995722 33995808 -51993126 - MIR3 SINE MIR -42 166 85 394 291 93 63 chr18 33996166 33996933 -51992001 + L1MEc LINE L1 1515 2304 -4818 274 265 144 23 chr18 33997034 33997166 -51991768 + L1MEc LINE L1 346 493 -5930 11742 44 4 0 chr18 33997243 33998710 -51990224 + L1P LINE L1 3750 5222 -924 * 35230 47 0 3 chr18 33998686 34003037 -51985897 + L1P LINE L1 1 4339 -1807 971 137 63 17 chr18 34003024 34003199 -51985735 + THE1C-int LTR MaLR 1397 1579 -1 * 1839 148 40 35 chr18 34003199 34003532 -51985402 + THE1C LTR MaLR 3 340 -35 1974 155 3 0 chr18 34003532 34003841 -51985093 - AluSx SINE Alu -2 310 1 1839 148 40 35 chr18 34003841 34003878 -51985056 + THE1C LTR MaLR 340 375 0 379 303 84 28 chr18 34003880 34004131 -51984803 + L1MEc LINE L1 3247 3511 -3430 28 61 0 0 chr18 34004478 34004527 -51984407 + AT_rich Low_complexity Low_complexity 1 49 0 294 306 109 48 chr18 34004583 34004913 -51984021 + L1MEc LINE L1 4219 4568 -2373 2581 210 84 28 chr18 34005143 34005925 -51983009 + Cheshire DNA MER1_type 682 1507 -913 538 244 0 0 chr18 34005973 34006055 -51982879 + G-rich Low_complexity Low_complexity 1 82 0 746 176 59 0 chr18 34006479 34006649 -51982285 - L1MA8 LINE L1 0 6291 6112 816 172 19 6 chr18 34006650 34006807 -51982127 + L1MA6 LINE L1 5861 6019 -281 876 36 9 9 chr18 34007726 34007837 -51981097 + L1PA4 LINE L1 6019 6129 -26 212 57 0 29 chr18 34007839 34007874 -51981060 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 3903 59 40 5 chr18 34007874 34008537 -51980397 + L1PA4 LINE L1 5183 5867 -288 2143 139 50 0 chr18 34008885 34009309 -51979625 - L1P LINE L1 -1024 5122 4678 * 10205 128 49 1 chr18 34009308 34010886 -51978048 + L1P LINE L1 3013 4665 -1481 31 0 0 0 chr18 34011383 34011414 -51977520 + AT_rich Low_complexity Low_complexity 1 31 0 8694 42 5 0 chr18 34011902 34012986 -51975948 - L1P LINE L1 -3358 2788 1700 4824 142 16 0 chr18 34013088 34013830 -51975104 - Tigger1 DNA MER2_type -1664 754 1 382 319 47 21 chr18 34013891 34014082 -51974852 + MER117 DNA MER1_type 2 197 0 4932 136 20 10 chr18 34014396 34014551 -51974383 + L1PA16 LINE L1 5333 5485 -681 2035 105 8 0 chr18 34014551 34014827 -51974107 + AluSg SINE Alu 3 280 -30 251 44 22 22 chr18 34014827 34014872 -51974062 + (TAAA)n Simple_repeat Simple_repeat 2 132 0 4932 136 20 10 chr18 34014872 34015518 -51973416 + L1PA16 LINE L1 5485 6143 -23 1174 212 79 19 chr18 34015572 34016276 -51972658 - MER69 DNA AcHobo -243 2283 1457 408 132 0 15 chr18 34016277 34016345 -51972589 + L1MD2 LINE L1 6264 6330 -29 567 253 130 12 chr18 34016707 34016869 -51972065 - MER5A DNA MER1_type 0 189 9 1424 264 94 80 chr18 34017164 34017467 -51971467 - MER69 DNA AcHobo -1318 1208 911 345 47 0 0 chr18 34017467 34017510 -51971424 + (TG)n Simple_repeat Simple_repeat 2 44 0 1424 264 94 80 chr18 34017510 34018084 -51970850 - MER69 DNA AcHobo -1615 911 318 333 227 0 13 chr18 34018424 34018499 -51970435 + LTR67 LTR ERVL 387 460 -97 21 0 0 0 chr18 34018501 34018522 -51970412 + AT_rich Low_complexity Low_complexity 1 21 0 2139 112 10 3 chr18 34018625 34018920 -51970014 + AluSx SINE Alu 1 297 -15 1732 189 51 16 chr18 34018989 34019360 -51969574 + L1MB2 LINE L1 5265 5648 -523 11516 133 14 8 chr18 34019360 34019894 -51969040 - Tigger1 DNA MER2_type 0 2418 1889 186 43 0 0 chr18 34019894 34019917 -51969017 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 11516 133 14 8 chr18 34019917 34021193 -51967741 - Tigger1 DNA MER2_type -529 1889 597 1952 195 16 11 chr18 34021193 34021563 -51967371 - Tigger1 DNA MER2_type -2046 372 1 2659 167 35 8 chr18 34021563 34022071 -51966863 + L1MB2 LINE L1 5647 6168 -3 1939 86 0 12 chr18 34022233 34022490 -51966444 + AluSg SINE Alu 1 254 -56 23 33 0 0 chr18 34022496 34022526 -51966408 + AT_rich Low_complexity Low_complexity 1 30 0 414 238 66 8 chr18 34023839 34023961 -51964973 - MIR SINE MIR -15 247 119 2275 137 17 3 chr18 34024000 34024359 -51964575 + THE1B LTR MaLR 1 364 0 23 33 0 0 chr18 34024462 34024492 -51964442 + AT_rich Low_complexity Low_complexity 1 30 0 769 232 198 31 chr18 34024501 34024885 -51964049 - MLT1J2 LTR MaLR 0 450 3 1127 164 35 0 chr18 34025354 34025555 -51963379 + MER2 DNA MER2_type 3 210 -135 241 323 0 0 chr18 34025600 34025665 -51963269 + MER2 DNA MER2_type 280 344 -1 21 0 0 0 chr18 34025757 34025778 -51963156 + AT_rich Low_complexity Low_complexity 1 21 0 815 285 87 13 chr18 34026285 34026597 -51962337 - MER46C DNA MER2_type 0 338 4 7210 226 49 29 chr18 34026746 34029413 -51959521 + L1MCa LINE L1 26 2880 -3546 2359 156 136 7 chr18 34029424 34029484 -51959450 + L1MC1 LINE L1 5740 5791 -542 2100 127 3 0 chr18 34029484 34029791 -51959143 - AluSq SINE Alu -5 308 1 2359 156 136 7 chr18 34029791 34030193 -51958741 + L1MC1 LINE L1 5791 6262 -71 234 128 0 0 chr18 34030213 34030252 -51958682 + (CA)n Simple_repeat Simple_repeat 2 40 0 370 252 7 7 chr18 34030297 34030440 -51958494 + (TA)n Simple_repeat Simple_repeat 1 143 0 2190 128 85 10 chr18 34031136 34031534 -51957400 + MSTA LTR MaLR 1 428 0 483 285 51 0 chr18 34031691 34031828 -51957106 + MIR SINE MIR 54 197 -65 182 222 0 0 chr18 34032654 34032690 -51956244 - MIR SINE MIR -120 142 107 1196 235 8 0 chr18 34033153 34033387 -51955547 - Tigger7 DNA MER2_type -2251 236 1 919 242 82 11 chr18 34033387 34033668 -51955266 + L1ME1 LINE L1 5508 5808 -358 857 210 18 59 chr18 34033670 34033942 -51954992 + L1ME1 LINE L1 5902 6162 -4 347 294 62 57 chr18 34034328 34034505 -51954429 - MIR SINE MIR -76 186 9 1642 187 37 3 chr18 34035659 34035959 -51952975 + AluJb SINE Alu 3 312 0 231 258 15 0 chr18 34036437 34036503 -51952431 + MIR SINE MIR 185 251 -11 594 270 59 25 chr18 34036684 34036921 -51952013 - L2 LINE L2 -5 3308 3064 386 377 66 43 chr18 34037082 34037910 -51951024 + L2 LINE L2 237 1083 -2231 854 245 31 5 chr18 34038402 34038598 -51950336 - MER3 DNA MER1_type -8 201 1 21 0 0 0 chr18 34038910 34038931 -51950003 + AT_rich Low_complexity Low_complexity 1 21 0 1402 254 108 17 chr18 34039107 34039525 -51949409 + L1MB8 LINE L1 20 475 -6384 3425 221 83 44 chr18 34039529 34040610 -51948324 + L1MB8 LINE L1 595 1819 -5128 4871 243 62 15 chr18 34040620 34042323 -51946611 + L1MB8 LINE L1 3014 4797 -2160 1369 220 30 18 chr18 34042378 34042778 -51946156 - L1M4 LINE L1 -3208 2938 2534 1174 257 18 6 chr18 34042785 34043128 -51945806 + L1MB8 LINE L1 4830 5176 -1781 3124 151 34 20 chr18 34043162 34043724 -51945210 - L1PA16 LINE L1 -4 6162 5593 1996 213 70 16 chr18 34043728 34044288 -51944646 - L1PA16 LINE L1 -879 5267 4678 255 155 17 0 chr18 34044300 34044358 -51944576 + L1MB8 LINE L1 5508 5566 -1391 325 159 0 40 chr18 34044366 34044492 -51944442 + (TA)n Simple_repeat Simple_repeat 2 122 0 2067 201 23 40 chr18 34044516 34045047 -51943887 + L1MB8 LINE L1 6468 6989 0 226 239 104 0 chr18 34045785 34045852 -51943082 - MIR3 SINE MIR -41 167 94 766 176 18 47 chr18 34045886 34046056 -51942878 - FRAM SINE Alu -13 163 1 21 36 0 0 chr18 34046143 34046171 -51942763 + AT_rich Low_complexity Low_complexity 1 28 0 1943 133 10 7 chr18 34046401 34046694 -51942240 - AluSg SINE Alu -16 294 1 183 100 0 0 chr18 34048413 34048443 -51940491 + (TTTTTA)n Simple_repeat Simple_repeat 2 31 0 686 103 0 0 chr18 34048443 34048540 -51940394 - HY3 scRNA scRNA -2 99 3 551 346 107 54 chr18 34048755 34049426 -51939508 + L2 LINE L2 2562 3272 0 412 343 68 0 chr18 34050015 34050161 -51938773 + L2 LINE L2 3116 3271 -1 3054 133 7 60 chr18 34050503 34051148 -51937786 + MER4B LTR ERV1 1 779 0 199 274 82 14 chr18 34051364 34051437 -51937497 - MIR SINE MIR -109 153 76 21 36 0 0 chr18 34052938 34052966 -51935968 + AT_rich Low_complexity Low_complexity 1 28 0 1207 157 0 0 chr18 34052996 34053181 -51935753 + MLT2B1 LTR ERVL 1 185 -335 8351 173 30 3 chr18 34053181 34054642 -51934292 + ERVL-B1 LTR ERVL 4258 5757 -7 2576 194 46 6 chr18 34054642 34055102 -51933832 + MLT2B1 LTR ERVL 1 484 -36 444 37 0 0 chr18 34055102 34055156 -51933778 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 2576 194 46 6 chr18 34055156 34055195 -51933739 + MLT2B1 LTR ERVL 484 520 0 335 246 97 26 chr18 34056286 34056400 -51932534 - MIR SINE MIR -70 192 71 362 311 146 33 chr18 34056514 34056726 -51932208 + MIR SINE MIR 11 246 -16 3383 173 15 87 chr18 34056859 34057725 -51931209 - L1MA7 LINE L1 -261 6030 5227 1364 172 4 0 chr18 34057725 34057985 -51930949 + L1MA3 LINE L1 6042 6304 -1 24 0 0 0 chr18 34057986 34058010 -51930924 + AT_rich Low_complexity Low_complexity 1 24 0 273 200 50 20 chr18 34058349 34058449 -51930485 + (CAAA)n Simple_repeat Simple_repeat 2 104 0 218 241 35 0 chr18 34058919 34058977 -51929957 + MIR SINE MIR 92 151 -57 211 215 31 15 chr18 34059228 34059293 -51929641 + (TA)n Simple_repeat Simple_repeat 2 67 0 184 273 11 57 chr18 34059665 34059753 -51929181 + MIR SINE MIR 4 87 -121 253 363 73 8 chr18 34060484 34060608 -51928326 + L2 LINE L2 3154 3285 -28 271 254 0 0 chr18 34061355 34061426 -51927508 - L3b LINE CR1 -388 1195 1125 418 341 99 25 chr18 34062338 34062661 -51926273 + L2 LINE L2 2153 2499 -815 230 400 19 19 chr18 34062685 34062790 -51926144 - L2 LINE L2 -22 3250 3146 204 258 56 79 chr18 34062808 34062897 -51926037 - MER91C DNA MER1_type -53 87 1 424 328 94 60 chr18 34062969 34063648 -51925286 + L2 LINE L2 2567 3272 0 731 219 129 0 chr18 34064101 34064311 -51924623 - L1MA9 LINE L1 -37 6275 6039 324 385 80 0 chr18 34064414 34064627 -51924307 + L2 LINE L2 1931 2160 -1154 244 278 134 10 chr18 34066404 34066501 -51922433 - MIR SINE MIR -6 256 148 2346 181 19 7 chr18 34066519 34066940 -51921994 + MSTB LTR MaLR 1 426 0 538 298 104 11 chr18 34067140 34067516 -51921418 + L1ME4a LINE L1 5532 5942 -179 568 317 150 20 chr18 34067828 34068416 -51920518 - L2 LINE L2 -1 3271 2608 2260 80 43 3 chr18 34068576 34068877 -51920057 + AluSq SINE Alu 1 313 0 25 0 0 0 chr18 34069491 34069516 -51919418 + AT_rich Low_complexity Low_complexity 1 25 0 234 234 0 0 chr18 34070780 34070827 -51918107 + (TG)n Simple_repeat Simple_repeat 2 48 0 189 0 0 0 chr18 34070937 34070958 -51917976 + (TA)n Simple_repeat Simple_repeat 1 21 0 180 0 0 0 chr18 34071309 34071329 -51917605 + (CAA)n Simple_repeat Simple_repeat 2 21 0 198 245 19 19 chr18 34071508 34071561 -51917373 - MER5A DNA MER1_type -1 188 136 791 304 64 56 chr18 34072885 34073368 -51915566 + LTR33A LTR ERVL 37 523 0 26 74 0 0 chr18 34073411 34073465 -51915469 + AT_rich Low_complexity Low_complexity 1 54 0 263 357 36 0 chr18 34074214 34074298 -51914636 + L2 LINE L2 3168 3254 -18 356 260 236 0 chr18 34075400 34075527 -51913407 + MER5A DNA MER1_type 27 183 -6 238 204 20 0 chr18 34075695 34075744 -51913190 + CT-rich Low_complexity Low_complexity 2 51 0 216 163 0 0 chr18 34077187 34077230 -51911704 + GA-rich Low_complexity Low_complexity 2 44 0 1485 144 21 14 chr18 34077319 34077603 -51911331 + L1MA5A LINE L1 6012 6297 0 229 203 189 14 chr18 34077908 34077982 -51910952 + L2 LINE L2 3140 3226 -46 503 213 250 20 chr18 34077995 34078239 -51910695 - MER5C DNA MER1_type 0 324 25 12418 208 41 33 chr18 34078282 34081199 -51907735 + L1M2 LINE L1 3 2968 -3880 1823 162 0 3 chr18 34081199 34081483 -51907451 + AluSx SINE Alu 1 283 -29 12418 208 41 33 chr18 34081483 34082778 -51906156 + L1M2 LINE L1 2968 4251 -2597 1576 150 31 3 chr18 34182778 34183064 -51805870 + L1P LINE L1 4375 4668 -1478 3659 211 29 85 chr18 34183064 34184153 -51804781 + MER52A LTR ERV1 169 1195 -560 269 172 241 0 chr18 34184146 34184204 -51804730 + MER52A LTR ERV1 1684 1755 0 * 1845 153 132 0 chr18 34184204 34184528 -51804406 + MER66A LTR ERV1 112 478 0 900 288 116 13 chr18 34186383 34186762 -51802172 + HAL1 LINE L1 75 492 -2015 747 232 67 137 chr18 34186773 34187342 -51801592 - MLT1H1 LTR MaLR -10 532 4 2801 90 21 0 chr18 34187397 34187775 -51801159 - MER41A LTR ERV1 -88 466 81 738 329 140 46 chr18 34187812 34188514 -51800420 + HAL1 LINE L1 575 1342 -1165 1903 172 55 36 chr18 34188536 34188955 -51799979 + MLT1C LTR MaLR 40 466 -1 1283 281 99 56 chr18 34188956 34190075 -51798859 + HAL1 LINE L1 1341 2507 0 272 325 9 0 chr18 34190195 34190287 -51798647 - MER5A DNA MER1_type -93 96 4 1428 214 22 106 chr18 34190536 34190654 -51798280 + LTR55 LTR ERV 3 129 -419 3674 173 62 4 chr18 34190654 34191346 -51797588 + MER44D DNA MER2_type 1 604 -1 1428 214 22 106 chr18 34191346 34191805 -51797129 + LTR55 LTR ERV 129 532 -16 233 125 42 0 chr18 34192115 34192163 -51796771 - LTR66 LTR ERVL -167 443 394 449 148 134 42 chr18 34192652 34192794 -51796140 - L1ME4a LINE L1 -6 6115 5961 514 269 164 32 chr18 34193596 34193815 -51795119 + MIR SINE MIR 12 259 -3 280 272 118 15 chr18 34193832 34194027 -51794907 - L1ME LINE L1 -376 5745 5531 443 305 124 58 chr18 34194158 34194375 -51794559 + L2 LINE L2 2816 3017 -296 315 0 0 0 chr18 34194375 34194410 -51794524 + (CA)n Simple_repeat Simple_repeat 1 35 0 443 305 124 58 chr18 34194410 34194658 -51794276 + L2 LINE L2 3017 3312 -1 1147 279 76 53 chr18 34194984 34195683 -51793251 + HAL1 LINE L1 579 1293 -1214 469 291 73 0 chr18 34195734 34195899 -51793035 + HAL1 LINE L1 1703 1879 -628 609 177 199 13 chr18 34196005 34196231 -51792703 - HsTC2 DNA Tc2 -4 1894 1627 22 35 0 0 chr18 34197074 34197103 -51791831 + AT_rich Low_complexity Low_complexity 1 29 0 775 241 35 35 chr18 34197376 34197666 -51791268 + HAL1 LINE L1 2129 2418 -89 478 378 46 50 chr18 34198494 34198817 -51790117 + L2 LINE L2 2951 3272 0 895 290 89 83 chr18 34199044 34199633 -51789301 - L2 LINE L2 -2 3311 2727 553 125 0 0 chr18 34199633 34199721 -51789213 + L1MA6 LINE L1 6208 6295 -5 895 290 89 83 chr18 34199721 34199956 -51788978 - L2 LINE L2 -586 2727 1050 278 303 45 56 chr18 34200173 34200371 -51788563 - L2 LINE L2 0 3313 3118 23 0 0 0 chr18 34200695 34200718 -51788216 + AT_rich Low_complexity Low_complexity 1 23 0 254 246 140 0 chr18 34200741 34200798 -51788136 + MIR SINE MIR 14 78 -184 452 238 62 88 chr18 34200836 34201029 -51787905 + MIR SINE MIR 72 259 -3 21 0 0 0 chr18 34201808 34201829 -51787105 + AT_rich Low_complexity Low_complexity 1 21 0 1988 192 45 52 chr18 34201834 34202339 -51786595 + MLT1D LTR MaLR 1 502 -3 21 36 0 0 chr18 34202373 34202401 -51786533 + AT_rich Low_complexity Low_complexity 1 28 0 1103 50 14 0 chr18 34202406 34202546 -51786388 - L1P2 LINE L1 -357 5797 5656 1712 52 0 0 chr18 34202546 34202757 -51786177 + L1PA5 LINE L1 5939 6150 -4 2538 203 2 4 chr18 34203227 34203754 -51785180 - L1 LINE L1 -1081 5065 4540 412 174 0 64 chr18 34203752 34203861 -51785073 + L1P LINE L1 5089 5190 -956 * 320 94 0 0 chr18 34203861 34203910 -51785024 + L1PB3 LINE L1 6102 6154 0 2169 67 4 0 chr18 34204313 34204581 -51784353 + AluY SINE Alu 37 305 -6 21 57 0 0 chr18 34204684 34204719 -51784215 + GC_rich Low_complexity Low_complexity 1 35 0 207 0 0 0 chr18 34204728 34204751 -51784183 + (A)n Simple_repeat Simple_repeat 1 23 0 1165 266 68 16 chr18 34205391 34205759 -51783175 - LTR16C LTR ERVL -7 484 98 445 167 0 0 chr18 34205948 34206014 -51782920 + LTR67 LTR ERVL 113 178 -379 1188 187 42 51 chr18 34206230 34206561 -51782373 - MER45B DNA AcHobo 0 1040 713 1733 311 79 30 chr18 34206662 34207373 -51781561 - MER45C DNA AcHobo -203 750 5 838 150 0 0 chr18 34207425 34207565 -51781369 - L1MA4 LINE L1 -11 6289 6150 253 225 75 12 chr18 34207644 34207724 -51781210 - MER69 DNA AcHobo 0 2526 2442 334 232 0 0 chr18 34207726 34207795 -51781139 - MER69 DNA AcHobo -1157 69 1 269 273 61 53 chr18 34207857 34207989 -51780945 + L2 LINE L2 1912 2044 -1270 1340 234 33 17 chr18 34209369 34209728 -51779206 - MLT1A1 LTR MaLR 0 365 1 249 91 0 23 chr18 34210135 34210179 -51778755 - L1PA10 LINE L1 -7 6161 6119 1632 211 3 0 chr18 34210311 34210615 -51778319 + AluJo SINE Alu 1 305 -7 597 90 0 0 chr18 34211062 34211151 -51777783 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 312 27 0 0 chr18 34211158 34211195 -51777739 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 21 82 0 0 chr18 34211931 34211980 -51776954 + AT_rich Low_complexity Low_complexity 1 49 0 1537 215 39 0 chr18 34213209 34213520 -51775414 + MER58B DNA MER1_type 1 323 -18 1443 29 0 0 chr18 34213630 34213803 -51775131 - L1PA2 LINE L1 0 6155 5983 1013 18 0 0 chr18 34213803 34213917 -51775017 + L1P1 LINE L1 5569 5682 -473 630 124 0 0 chr18 34214265 34214386 -51774548 + (GA)n Simple_repeat Simple_repeat 2 122 0 180 250 54 0 chr18 34215065 34215111 -51773823 - MIR SINE MIR -66 196 145 333 0 0 0 chr18 34215111 34215148 -51773786 + (CA)n Simple_repeat Simple_repeat 2 38 0 26 30 0 0 chr18 34215159 34215192 -51773742 + AT_rich Low_complexity Low_complexity 1 33 0 379 279 101 16 chr18 34215206 34215335 -51773599 - MIR SINE MIR -115 147 8 223 315 28 19 chr18 34215549 34215657 -51773277 + L2 LINE L2 2166 2274 -1040 4955 162 17 50 chr18 34216293 34217248 -51771686 + MER49 LTR ERV1 1 923 0 22 35 0 0 chr18 34218997 34219026 -51769908 + AT_rich Low_complexity Low_complexity 1 29 0 2618 195 43 24 chr18 34219157 34219778 -51769156 + LTR27 LTR ERV1 3 635 -1 303 310 76 65 chr18 34219823 34220007 -51768927 + L2 LINE L2 3127 3312 -1 285 261 34 84 chr18 34220323 34220442 -51768492 + MIR SINE MIR 77 189 -73 375 261 122 58 chr18 34220454 34220642 -51768292 + L1MC4a LINE L1 6167 6366 -1442 1577 204 0 0 chr18 34220846 34221131 -51767803 - Tigger3(Golem) DNA MER2_type -2744 285 1 801 224 72 57 chr18 34221154 34221485 -51767449 + L1MC5 LINE L1 7114 7449 -512 1666 166 15 27 chr18 34222213 34222555 -51766379 - L1MA7 LINE L1 -148 6156 5806 906 114 27 7 chr18 34222558 34222707 -51766227 + L1MA7 LINE L1 6134 6285 -6 23 33 0 0 chr18 34222708 34222738 -51766196 + AT_rich Low_complexity Low_complexity 1 30 0 195 298 0 0 chr18 34223661 34223718 -51765216 + L2 LINE L2 3252 3308 -5 1456 198 19 6 chr18 34224140 34224454 -51764480 - L1 LINE L1 -1779 4367 4050 430 261 0 0 chr18 34225988 34226080 -51762854 + Charlie1 DNA MER1_type 7 98 -2663 1529 217 90 42 chr18 34226568 34227002 -51761932 + Charlie1a DNA MER1_type 1 455 -1000 * 2530 256 45 12 chr18 34226978 34227638 -51761296 - MER76 LTR ERV -6 682 1 3612 206 71 23 chr18 34227664 34227966 -51760968 + Charlie1a DNA MER1_type 441 727 -2034 1253 193 61 120 chr18 34227966 34228458 -51760476 + MLT1C LTR MaLR 5 467 0 3612 206 71 23 chr18 34228458 34229123 -51759811 + Charlie1a DNA MER1_type 727 1455 0 203 360 61 9 chr18 34229507 34229621 -51759313 - MER5A DNA MER1_type -53 136 17 3268 229 0 8 chr18 34230429 34231193 -51757741 - L1PB1 LINE L1 -942 5204 4447 6067 90 12 19 chr18 34231193 34232156 -51756778 + L1PB1 LINE L1 5194 6150 -1 352 338 38 0 chr18 34232246 34232403 -51756531 - MIR SINE MIR -14 248 86 25 0 0 0 chr18 34232964 34232989 -51755945 + AT_rich Low_complexity Low_complexity 1 25 0 234 0 0 0 chr18 34233118 34233144 -51755790 + (TA)n Simple_repeat Simple_repeat 2 27 0 2742 7 0 0 chr18 34233258 34233557 -51755377 - AluYa5 SINE Alu -12 299 1 24 0 0 0 chr18 34233558 34233582 -51755352 + AT_rich Low_complexity Low_complexity 1 24 0 280 368 93 16 chr18 34234784 34234977 -51753957 + MIR SINE MIR 34 241 -21 1280 197 168 27 chr18 34235084 34235496 -51753438 + Charlie4a DNA MER1_type 37 506 -2 639 294 17 25 chr18 34235738 34235976 -51752958 + L2 LINE L2 2414 2649 -665 231 229 0 0 chr18 34237854 34237902 -51751032 + U6 snRNA snRNA 17 64 -43 303 245 61 61 chr18 34237916 34237995 -51750939 + L1ME4a LINE L1 5762 5840 -281 2104 89 36 0 chr18 34237995 34238276 -51750658 + AluSp SINE Alu 2 292 -21 303 245 61 61 chr18 34238276 34238359 -51750575 + L1ME4a LINE L1 5839 5924 -197 790 0 40 0 chr18 34238361 34238461 -51750473 + (GAAA)n Simple_repeat Simple_repeat 1 104 0 2575 149 9 19 chr18 34239057 34239486 -51749448 + MSTC LTR MaLR 4 428 0 314 284 118 0 chr18 34239537 34239639 -51749295 + MIR SINE MIR 84 197 -65 301 75 38 0 chr18 34240293 34240346 -51748588 + (TTG)n Simple_repeat Simple_repeat 2 56 0 2100 109 0 16 chr18 34240357 34240670 -51748264 - AluSc SINE Alu -1 308 1 4013 57 0 2 chr18 34240674 34241180 -51747754 - L1PA7 LINE L1 -2 6152 5648 35 29 0 44 chr18 34241752 34241820 -51747114 + AT_rich Low_complexity Low_complexity 1 65 0 373 278 53 0 chr18 34242038 34242171 -51746763 + MIR SINE MIR 16 155 -107 352 248 20 92 chr18 34242192 34242345 -51746589 - L1MCa LINE L1 -4906 1520 1379 3171 266 43 48 chr18 34242357 34244173 -51744761 - L1MEc LINE L1 -2726 4231 2466 203 222 0 28 chr18 34244250 34244322 -51744612 + (CATATA)n Simple_repeat Simple_repeat 3 72 0 616 303 25 32 chr18 34244549 34244826 -51744108 - L1MEc LINE L1 -4612 2526 2252 878 235 60 34 chr18 34245149 34245417 -51743517 - L1MB7 LINE L1 -16 6168 5894 950 267 44 72 chr18 34245421 34245810 -51743124 - L1MEc LINE L1 -6453 406 29 513 273 70 70 chr18 34246146 34246388 -51742546 + MIR SINE MIR 10 251 -11 294 95 0 0 chr18 34247487 34247529 -51741405 + (TA)n Simple_repeat Simple_repeat 1 42 0 207 0 0 0 chr18 34248462 34248485 -51740449 + (T)n Simple_repeat Simple_repeat 1 23 0 23 33 0 0 chr18 34248498 34248528 -51740406 + GC_rich Low_complexity Low_complexity 1 30 0 1946 140 3 29 chr18 34248669 34248984 -51739950 - AluSx SINE Alu -3 309 3 754 276 53 16 chr18 34249054 34249297 -51739637 - MIR SINE MIR 0 262 11 2343 71 3 0 chr18 34251353 34251663 -51737271 - AluY SINE Alu 0 311 1 226 275 25 0 chr18 34251871 34251951 -51736983 + L1M4 LINE L1 5771 5852 -332 200 93 70 0 chr18 34251993 34252036 -51736898 + (TATAA)n Simple_repeat Simple_repeat 4 49 0 3211 209 131 44 chr18 34252253 34253340 -51735594 + Charlie1a DNA MER1_type 47 1227 -228 208 225 0 0 chr18 34253384 34253424 -51735510 + GA-rich Low_complexity Low_complexity 2 41 0 276 235 0 0 chr18 34254097 34254165 -51734769 + GA-rich Low_complexity Low_complexity 3 70 0 322 296 47 70 chr18 34254936 34255237 -51733697 - L1MB7 LINE L1 -2234 5551 5258 2156 97 3 3 chr18 34255306 34255595 -51733339 + AluSx SINE Alu 1 289 -23 308 261 43 0 chr18 34256023 34256092 -51732842 + L2 LINE L2 3136 3207 -65 21 71 0 0 chr18 34256290 34256332 -51732602 + AT_rich Low_complexity Low_complexity 1 42 0 2167 182 88 9 chr18 34256479 34256931 -51732003 + MER6 DNA MER2_type -20 795 -70 31528 102 8 17 chr18 34256931 34260752 -51728182 - L1PA7 LINE L1 -12 6457 2616 188 0 74 0 chr18 34260752 34260779 -51728155 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 31528 102 8 17 chr18 34260779 34262631 -51726303 - L1PA7 LINE L1 -3853 2616 750 2451 122 18 8 chr18 34262633 34263034 -51725900 + MER6 DNA MER2_type 460 864 -1 4921 169 40 59 chr18 34264813 34265277 -51723657 - L1MA7 LINE L1 -40 6251 5780 309 109 0 0 chr18 34265277 34265323 -51723611 + (TG)n Simple_repeat Simple_repeat 2 47 0 4921 169 40 59 chr18 34265323 34265428 -51723506 - L1MA7 LINE L1 -511 5780 5674 270 0 0 0 chr18 34265428 34265458 -51723476 + (TA)n Simple_repeat Simple_repeat 2 31 0 4921 169 40 59 chr18 34265458 34266935 -51721999 - L1MA7 LINE L1 -617 5674 4244 422 299 37 51 chr18 34266973 34267190 -51721744 + MLT1K LTR MaLR 375 588 0 366 180 22 56 chr18 34267263 34267352 -51721582 - L2 LINE L2 0 3313 3228 1157 227 40 11 chr18 34267509 34267787 -51721147 - MLT1C LTR MaLR -3 464 179 352 113 19 0 chr18 34267796 34267849 -51721085 - MLT1C LTR MaLR -413 54 1 248 340 32 11 chr18 34267854 34267948 -51720986 - L2 LINE L2 -219 3053 2958 2778 168 14 6 chr18 34268973 34269466 -51719468 + LOR1a LTR ERV1 1 497 0 1463 197 64 7 chr18 34269562 34269857 -51719077 - AluJo SINE Alu 0 312 1 223 296 78 43 chr18 34269996 34270111 -51718823 - L2 LINE L2 -22 3291 3173 201 304 0 0 chr18 34270368 34270424 -51718510 + L2 LINE L2 3184 3239 -74 207 289 195 8 chr18 34272614 34272742 -51716192 - MIR SINE MIR -38 224 73 230 298 81 43 chr18 34272894 34273058 -51715876 - MIR SINE MIR -56 206 35 2175 82 10 10 chr18 34273276 34273568 -51715366 + AluSx SINE Alu 1 292 -20 21 36 0 0 chr18 34274016 34274044 -51714890 + AT_rich Low_complexity Low_complexity 1 28 0 3752 237 58 17 chr18 34274576 34275776 -51713158 - L1MEc LINE L1 -1941 4274 3025 810 309 70 22 chr18 34275776 34276145 -51712789 - LTR16B LTR ERVL 0 464 78 436 274 50 42 chr18 34276221 34276462 -51712472 - HERV16 LTR ERVL 0 4996 4754 491 301 50 26 chr18 34276603 34277054 -51711880 - HERV16 LTR ERVL -301 5026 4535 253 279 59 0 chr18 34277388 34277456 -51711478 - HERV16 LTR ERVL -4909 87 16 752 317 27 8 chr18 34277471 34277733 -51711201 - LTR16B LTR ERVL -2 462 196 555 207 23 129 chr18 34277796 34278013 -51710921 + LTR40a LTR ERVL 326 519 0 2269 243 57 20 chr18 34278071 34279041 -51709893 - L1MEc LINE L1 -3194 3021 2045 528 318 88 13 chr18 34279187 34279505 -51709429 - L1MEc LINE L1 -6013 383 42 441 336 60 25 chr18 34279645 34280011 -51708923 - L1ME4a LINE L1 -165 5956 5578 300 91 0 0 chr18 34280663 34280707 -51708227 + (GA)n Simple_repeat Simple_repeat 2 45 0 608 253 6 52 chr18 34281029 34281203 -51707731 - L2 LINE L2 0 3313 3148 2002 231 105 96 chr18 34281204 34281852 -51707082 + MLT1E3 LTR MaLR 1 624 0 355 254 114 72 chr18 34281852 34282088 -51706846 - L2 LINE L2 -162 3151 2906 180 217 0 0 chr18 34282212 34282258 -51706676 + CT-rich Low_complexity Low_complexity 3 48 0 622 315 103 55 chr18 34282261 34283104 -51705830 - L2 LINE L2 -2 3311 2406 2065 129 3 3 chr18 34283435 34283730 -51705204 - AluSx SINE Alu -17 295 1 3911 153 47 32 chr18 34283759 34284065 -51704869 - Tigger1 DNA MER2_type 0 2418 2118 1461 175 13 70 chr18 34284065 34284380 -51704554 - AluJo SINE Alu -15 297 1 3911 153 47 32 chr18 34284380 34284801 -51704133 - Tigger1 DNA MER2_type -300 2118 1680 8918 142 48 2 chr18 34284808 34285992 -51702942 - Tigger1 DNA MER2_type -880 1538 271 4394 126 4 17 chr18 34285992 34286705 -51702229 + L1PA15 LINE L1 5460 6163 -2 8918 142 48 2 chr18 34286705 34286989 -51701945 - Tigger1 DNA MER2_type -2147 271 2 1321 215 68 104 chr18 34287201 34287306 -51701628 + L1MC5 LINE L1 6624 6731 -1230 195 42 0 0 chr18 34287306 34287330 -51701604 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1321 215 68 104 chr18 34287330 34287629 -51701305 + L1MC5 LINE L1 6731 6995 -966 2121 123 0 0 chr18 34287629 34287921 -51701013 + AluSc SINE Alu 1 292 -17 1321 215 68 104 chr18 34287921 34288195 -51700739 + L1MC5 LINE L1 6995 7278 -683 2250 42 0 0 chr18 34288197 34288482 -51700452 - L1P LINE L1 -851 5295 5011 6561 48 1 1 chr18 34288483 34289296 -51699638 + L1PA5 LINE L1 5337 6149 -5 1545 221 122 36 chr18 34289311 34289948 -51698986 + L1MC5 LINE L1 7262 7953 -8 2758 0 0 0 chr18 34290171 34290470 -51698464 - AluYa5 SINE Alu -12 299 1 1032 259 174 18 chr18 34290518 34290966 -51697968 - LTR33 LTR ERVL -3 518 1 288 0 0 0 chr18 34291110 34291142 -51697792 + (TG)n Simple_repeat Simple_repeat 2 33 0 489 268 46 86 chr18 34291224 34291445 -51697489 + L1MC/D LINE L1 5350 5564 -780 2019 204 4 50 chr18 34291445 34291907 -51697027 - MER41B LTR ERV1 -33 602 162 375 264 112 16 chr18 34292023 34292148 -51696786 + MIR SINE MIR 1 137 -125 315 149 45 30 chr18 34292155 34292222 -51696712 + MIR SINE MIR 101 168 -94 251 207 46 46 chr18 34292523 34292610 -51696324 + HAL1b LINE L1 1187 1273 -75 24 0 0 0 chr18 34293375 34293399 -51695535 + AT_rich Low_complexity Low_complexity 1 24 0 2530 100 14 3 chr18 34293533 34293893 -51695041 + THE1B LTR MaLR 1 364 0 28 0 0 0 chr18 34294174 34294202 -51694732 + AT_rich Low_complexity Low_complexity 1 28 0 1744 170 29 32 chr18 34295293 34295669 -51693265 - THE1C LTR MaLR 0 375 1 9540 129 31 24 chr18 34295669 34297238 -51691696 - THE1C-int LTR MaLR 0 1580 1 1819 139 70 25 chr18 34297238 34297597 -51691337 - THE1C LTR MaLR 0 375 1 22 99 0 0 chr18 34297648 34297719 -51691215 + AT_rich Low_complexity Low_complexity 1 71 0 567 201 7 7 chr18 34298338 34298477 -51690457 + L1MB8 LINE L1 1259 1397 -5145 1559 208 24 10 chr18 34298489 34298907 -51690027 + L1MB8 LINE L1 3124 3547 -3097 * 5107 199 43 13 chr18 34298883 34300859 -51688075 + L1MB8 LINE L1 4638 6670 -6 651 306 106 0 chr18 34300991 34301266 -51687668 - L1ME3 LINE L1 -48 6114 5811 3070 220 81 3 chr18 34301267 34301998 -51686936 - L1MC3 LINE L1 -167 7618 6831 308 51 17 51 chr18 34302000 34302059 -51686875 - L1PA16 LINE L1 0 6166 6110 2002 138 12 9 chr18 34302063 34302397 -51686537 - L1PA16 LINE L1 -104 6062 5728 2168 157 35 59 chr18 34302397 34302982 -51685952 + MLT2A2 LTR ERVL 1 554 0 5257 177 24 4 chr18 34302982 34304505 -51684429 - L1P4 LINE L1 -434 5732 4181 1695 159 0 0 chr18 34304491 34304761 -51684173 - L1MC3 LINE L1 -934 6851 6582 * 1426 229 139 16 chr18 34304761 34305207 -51683727 - MLT1D LTR MaLR 0 505 5 1811 188 57 11 chr18 34305209 34305577 -51683357 + MLT1B LTR MaLR 6 390 0 3810 206 69 8 chr18 34305585 34306457 -51682477 - L1MC3 LINE L1 -1198 6587 5663 977 288 7 3 chr18 34306460 34306762 -51682172 - L1M4 LINE L1 -2476 3670 3368 1354 257 33 48 chr18 34306768 34307165 -51681769 - L1MCb LINE L1 -5444 601 211 3037 131 45 0 chr18 34307189 34307716 -51681218 - L1MA7 LINE L1 0 6291 5741 289 268 134 45 chr18 34307721 34307787 -51681147 - L1MCb LINE L1 -6282 282 217 826 187 15 22 chr18 34307787 34308004 -51680930 - L1ME3 LINE L1 -293 5872 -257 1548 101 39 0 chr18 34308902 34309159 -51679775 + L1MA4 LINE L1 6028 6294 -6 477 0 0 0 chr18 34309360 34309413 -51679521 + (CA)n Simple_repeat Simple_repeat 2 54 0 206 361 0 0 chr18 34309832 34309893 -51679041 + L3 LINE CR1 1514 1574 -3 284 391 118 27 chr18 34309928 34310595 -51678339 - L2 LINE L2 -338 2976 2249 235 289 66 0 chr18 34311166 34311242 -51677692 + MIR3 SINE MIR 118 198 -10 529 125 0 0 chr18 34311386 34311466 -51677468 - MADE1 DNA Mariner 0 80 1 704 224 164 0 chr18 34311611 34311763 -51677171 + MER5A DNA MER1_type 13 189 0 258 266 51 0 chr18 34312990 34313069 -51675865 + L1ME LINE L1 137 219 -5986 1696 289 51 21 chr18 34313261 34313925 -51675009 + L1ME LINE L1 225 908 -5297 980 65 0 43 chr18 34313927 34314066 -51674868 + AluSg/x SINE Alu 174 306 -6 608 254 20 66 chr18 34314079 34314286 -51674648 + L1ME LINE L1 914 1096 -5119 1472 196 39 21 chr18 34314286 34314571 -51674363 + AluJb SINE Alu 6 295 -17 608 254 20 66 chr18 34314571 34314756 -51674178 + L1ME LINE L1 1096 1288 -4927 353 47 0 0 chr18 34314870 34314913 -51674021 + tRNA-Gln-CAG tRNA tRNA 1 43 -32 987 280 65 19 chr18 34314913 34315013 -51673921 + L1ME LINE L1 1790 1884 -4512 2364 159 26 28 chr18 34315013 34315471 -51673463 + MSTB2 LTR MaLR 1 457 0 987 280 65 19 chr18 34315471 34315892 -51673042 + L1ME LINE L1 1884 2335 -4061 255 132 0 132 chr18 34315891 34315967 -51672967 + L1ME LINE L1 3263 3328 -2887 * 207 0 0 0 chr18 34315974 34315997 -51672937 + (GA)n Simple_repeat Simple_repeat 2 24 0 387 246 29 22 chr18 34316024 34316162 -51672772 + L1ME2 LINE L1 2390 2528 -3618 1055 246 120 59 chr18 34316165 34316680 -51672254 + MLT1F1 LTR MaLR 1 562 -5 1941 239 42 14 chr18 34316688 34317394 -51671540 + L1ME2 LINE L1 2530 3255 -2891 1493 221 64 43 chr18 34317446 34317916 -51671018 + L1ME2 LINE L1 5642 6121 -43 241 377 0 14 chr18 34317916 34318054 -51670880 + GA-rich Low_complexity Low_complexity 4 139 0 257 248 139 47 chr18 34318411 34318540 -51670394 + L1MC5 LINE L1 7721 7861 -100 2264 108 0 0 chr18 34318587 34318892 -51670042 + AluSq SINE Alu 1 305 -8 800 222 7 0 chr18 34320376 34320520 -51668414 - FRAM SINE Alu -33 143 1 423 0 0 0 chr18 34322081 34322128 -51666806 + (CA)n Simple_repeat Simple_repeat 2 48 0 27 0 0 0 chr18 34324321 34324348 -51664586 + AT_rich Low_complexity Low_complexity 1 27 0 238 346 0 19 chr18 34324724 34324828 -51664106 + CT-rich Low_complexity Low_complexity 3 104 0 22 0 0 0 chr18 34325964 34325986 -51662948 + AT_rich Low_complexity Low_complexity 1 22 0 221 56 0 28 chr18 34326177 34326213 -51662721 + (TG)n Simple_repeat Simple_repeat 1 35 0 183 91 0 73 chr18 34326566 34326621 -51662313 + (CAAAAA)n Simple_repeat Simple_repeat 4 54 0 27 29 0 0 chr18 34327352 34327386 -51661548 + GC_rich Low_complexity Low_complexity 1 34 0 542 288 13 0 chr18 34327956 34328109 -51660825 - MIR SINE MIR -41 221 67 450 0 0 0 chr18 34329208 34329258 -51659676 + (CA)n Simple_repeat Simple_repeat 2 51 0 524 346 58 8 chr18 34330367 34330610 -51658324 - MIR SINE MIR -3 259 5 1079 89 0 0 chr18 34331011 34331146 -51657788 + AluSq/x SINE Alu 1 135 -178 2133 76 0 59 chr18 34331146 34331502 -51657432 + AluY SINE Alu 1 338 0 4602 166 54 28 chr18 34331921 34332921 -51656013 - L1MD1 LINE L1 -2 6634 5616 3655 241 44 31 chr18 34332981 34333444 -51655490 - L1MD1 LINE L1 -1402 5138 4683 204 40 0 0 chr18 34333444 34333469 -51655465 + (TG)n Simple_repeat Simple_repeat 2 26 0 3655 241 44 31 chr18 34333469 34333484 -51655450 - L1MD1 LINE L1 -1857 4683 4670 2137 114 0 0 chr18 34333484 34333782 -51655152 - AluSx SINE Alu -14 298 1 451 162 30 0 chr18 34333789 34333888 -51655046 - L1MA7 LINE L1 -3 6288 6187 3655 241 44 31 chr18 34333888 34334634 -51654300 - L1MD1 LINE L1 -1875 4665 3889 1897 136 10 108 chr18 34334668 34335086 -51653848 - MLT1B LTR MaLR 0 390 14 9881 210 57 31 chr18 34335091 34336298 -51652636 - L1MD1 LINE L1 -2697 3843 2669 2393 79 10 7 chr18 34336298 34336602 -51652332 - AluY SINE Alu -6 305 1 9881 210 57 31 chr18 34336602 34336845 -51652089 - L1MD1 LINE L1 -3871 2669 2434 2123 76 3 94 chr18 34336845 34337174 -51651760 - AluY SINE Alu -12 299 1 9881 210 57 31 chr18 34337174 34338011 -51650923 - L1MD1 LINE L1 -4106 2434 1620 1508 219 81 59 chr18 34338011 34338505 -51650429 - MLT1D LTR MaLR 0 505 1 9881 210 57 31 chr18 34338505 34339929 -51649005 - L1MD1 LINE L1 -4920 1620 18 689 220 55 16 chr18 34340687 34340869 -51648065 + MER5A DNA MER1_type 1 189 0 183 91 0 73 chr18 34342734 34342789 -51646145 + (TTTTTG)n Simple_repeat Simple_repeat 4 54 0 277 364 136 0 chr18 34343204 34343322 -51645612 + L2 LINE L2 3137 3270 -2 266 227 15 15 chr18 34343477 34343543 -51645391 + MER5B DNA MER1_type 86 151 -27 522 320 108 5 chr18 34343750 34343953 -51644981 - MIR SINE MIR -19 243 20 278 348 139 19 chr18 34343963 34344121 -51644813 + MER5B DNA MER1_type 1 177 -1 786 170 0 14 chr18 34344258 34344399 -51644535 + FLAM_C SINE Alu 3 141 -2 409 199 128 50 chr18 34344926 34345067 -51643867 - MER5B DNA MER1_type -5 173 22 557 271 121 24 chr18 34345179 34345386 -51643548 - MIR SINE MIR -17 245 19 426 336 93 9 chr18 34345660 34345888 -51643046 + MIR SINE MIR 16 256 -6 1772 158 52 18 chr18 34346367 34346752 -51642182 - L1MA8 LINE L1 -3 6288 5891 213 39 0 0 chr18 34347424 34347450 -51641484 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1038 196 8 51 chr18 34347458 34347693 -51641241 - AluJo SINE Alu -44 268 44 1877 156 24 0 chr18 34349235 34349556 -51639378 - AluSx SINE Alu 0 312 1 848 240 147 26 chr18 34349891 34350237 -51638697 - L1MCc LINE L1 -3608 3333 2946 6047 131 16 29 chr18 34350251 34351671 -51637263 - L1PB1 LINE L1 -1 6150 4747 1450 272 62 75 chr18 34351669 34353270 -51635664 - L1MCc LINE L1 -4131 2991 1213 * 268 311 32 99 chr18 34353571 34353761 -51635173 - L1MCc LINE L1 -5956 467 316 2234 64 3 14 chr18 34353761 34354087 -51634847 + AluY SINE Alu 1 323 0 268 311 32 99 chr18 34354087 34354300 -51634634 - L1MCc LINE L1 -6107 316 90 2282 90 0 10 chr18 34354419 34354719 -51634215 - AluSc SINE Alu -12 297 1 1392 280 134 64 chr18 34354719 34355362 -51633572 - MER115 DNA AcHobo -5 688 1 2271 254 119 104 chr18 34356232 34358703 -51630231 + HAL1 LINE L1 1 2507 0 571 216 244 69 chr18 34359003 34359322 -51629612 + MSTB2 LTR MaLR 1 375 -82 1122 141 9 88 chr18 34359764 34359991 -51628943 - AluJo SINE Alu -17 295 87 26 50 0 0 chr18 34360309 34360349 -51628585 + AT_rich Low_complexity Low_complexity 1 40 0 330 302 108 0 chr18 34360360 34360499 -51628435 - MIR SINE MIR -44 218 65 528 264 36 0 chr18 34360621 34360731 -51628203 - MER81 DNA DNA 0 114 1 198 0 0 0 chr18 34361484 34361506 -51627428 + (TG)n Simple_repeat Simple_repeat 2 23 0 248 141 87 22 chr18 34361760 34361852 -51627082 + (TTATA)n Simple_repeat Simple_repeat 4 101 0 2548 192 45 62 chr18 34361993 34362158 -51626776 - L1MA9 LINE L1 -36 6276 6110 2000 110 0 4 chr18 34362158 34362430 -51626504 + AluY SINE Alu 35 305 -6 2548 192 45 62 chr18 34362430 34362937 -51625997 - L1MA9 LINE L1 -202 6110 5616 183 80 0 0 chr18 34363994 34364019 -51624915 + (CATA)n Simple_repeat Simple_repeat 4 28 0 226 200 113 75 chr18 34364212 34364292 -51624642 - L2 LINE L2 -5 3267 3185 21 0 0 0 chr18 34365113 34365134 -51623800 + AT_rich Low_complexity Low_complexity 1 21 0 351 0 0 0 chr18 34365265 34365304 -51623630 + (CA)n Simple_repeat Simple_repeat 2 40 0 295 309 24 85 chr18 34368350 34368644 -51620290 - L1MEd LINE L1 -5283 836 561 246 62 0 0 chr18 34369014 34369046 -51619888 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 1771 133 0 33 chr18 34369046 34369316 -51619618 - AluSx SINE Alu -51 261 1 2664 74 8 0 chr18 34369655 34370007 -51618927 - L1PA7 LINE L1 -2 6152 5798 199 345 46 88 chr18 34370164 34370425 -51618509 + L2 LINE L2 2556 2805 -509 192 304 148 9 chr18 34370690 34370805 -51618129 + L2 LINE L2 3142 3272 0 180 111 0 0 chr18 34371002 34371029 -51617905 + (T)n Simple_repeat Simple_repeat 1 27 0 2351 72 3 10 chr18 34371380 34371673 -51617261 + AluY SINE Alu 1 291 -20 2019 130 27 3 chr18 34372474 34372775 -51616159 - AluSx SINE Alu -4 308 1 27 49 0 0 chr18 34373008 34373049 -51615885 + AT_rich Low_complexity Low_complexity 1 41 0 277 306 20 10 chr18 34373591 34373689 -51615245 - MLT1I LTR MaLR -33 376 278 473 244 8 41 chr18 34373696 34373819 -51615115 - MLT1I LTR MaLR -243 166 48 * 2750 164 25 15 chr18 34373815 34374290 -51614644 - MER66B LTR ERV1 -6 480 1 548 273 26 0 chr18 34375141 34375295 -51613639 - MER103 DNA DNA -8 158 1 192 40 0 0 chr18 34375303 34375328 -51613606 + (TAGA)n Simple_repeat Simple_repeat 4 28 0 1133 148 83 138 chr18 34375398 34375527 -51613407 + AluJo SINE Alu 6 141 -171 1986 118 24 0 chr18 34375527 34375824 -51613110 + AluSg SINE Alu 1 304 -6 180 0 0 0 chr18 34375826 34375846 -51613088 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1133 148 83 138 chr18 34375846 34376038 -51612896 + AluJo SINE Alu 142 312 0 27 0 0 0 chr18 34376043 34376070 -51612864 + AT_rich Low_complexity Low_complexity 1 27 0 332 171 37 0 chr18 34376215 34376297 -51612637 - L1MB4 LINE L1 -1 6179 6095 360 0 0 0 chr18 34378431 34378471 -51610463 + (CA)n Simple_repeat Simple_repeat 1 40 0 353 355 99 25 chr18 34379354 34379733 -51609201 - L2 LINE L2 -92 3180 2767 2468 63 0 0 chr18 34382040 34382341 -51606593 - AluY SINE Alu -10 301 1 21 0 0 0 chr18 34382818 34382839 -51606095 + AT_rich Low_complexity Low_complexity 1 21 0 219 288 51 9 chr18 34383119 34383229 -51605705 - MIR SINE MIR -64 144 30 371 271 102 8 chr18 34383539 34383657 -51605277 + MIR SINE MIR 79 207 -55 187 276 35 23 chr18 34384482 34384569 -51604365 + MIR SINE MIR 28 115 -147 13536 147 11 14 chr18 34385725 34387799 -51601135 + Tigger1 DNA MER2_type 1 2069 -349 2183 154 72 12 chr18 34387799 34388201 -51600733 - MSTB LTR MaLR 0 426 1 13536 147 11 14 chr18 34388201 34388357 -51600577 + Tigger1 DNA MER2_type 2069 2224 -194 3917 147 7 40 chr18 34388358 34389040 -51599894 - L1PA15 LINE L1 -6 6159 5500 1067 211 8 4 chr18 34389040 34389287 -51599647 + L1P LINE L1 5024 5271 -875 5946 209 9 2 chr18 34389298 34390537 -51598397 - L1PA15 LINE L1 -1364 4782 3536 1247 145 10 0 chr18 34390537 34390737 -51598197 + Tigger1 DNA MER2_type 2217 2418 0 320 296 143 27 chr18 34390845 34390982 -51597952 - MIR3 SINE MIR -11 197 49 223 288 245 0 chr18 34391597 34391736 -51597198 - L2 LINE L2 -1 3312 3140 1377 344 71 41 chr18 34391995 34393202 -51595732 - L2 LINE L2 -460 2854 1612 2388 126 78 5 chr18 34393274 34393672 -51595262 - MSTA LTR MaLR -1 427 1 319 115 67 10 chr18 34393938 34394042 -51594892 + (TA)n Simple_repeat Simple_repeat 2 111 0 3180 138 40 7 chr18 34394166 34394739 -51594195 + L1MA8 LINE L1 5688 6279 -12 1758 121 77 6 chr18 34394750 34395073 -51593861 + L1MA8 LINE L1 5939 6284 -7 2445 185 30 65 chr18 34395230 34395804 -51593130 + MLT2B3 LTR ERVL 1 554 0 280 250 24 24 chr18 34396438 34396522 -51592412 - L2 LINE L2 0 3313 3230 181 311 44 33 chr18 34397481 34397571 -51591363 - L2 LINE L2 -49 3223 3133 2024 121 0 53 chr18 34397654 34397832 -51591102 - AluSx SINE Alu -6 306 151 2171 96 27 7 chr18 34397832 34398125 -51590809 - AluSx SINE Alu -13 299 1 2024 121 0 53 chr18 34398125 34398269 -51590665 - AluSx SINE Alu -161 151 1 224 336 153 17 chr18 34399293 34399534 -51589400 + L3 LINE CR1 178 451 -1126 807 144 0 0 chr18 34400768 34400886 -51588048 - FLAM_C SINE Alu -24 119 2 22 35 0 0 chr18 34401830 34401859 -51587075 + AT_rich Low_complexity Low_complexity 1 29 0 185 393 75 28 chr18 34402574 34403109 -51585825 + L2 LINE L2 247 806 -2508 431 317 161 28 chr18 34403292 34403834 -51585100 - L2 LINE L2 -634 2680 2067 269 232 14 14 chr18 34403868 34403932 -51585002 - MIR SINE MIR 0 262 199 519 305 133 13 chr18 34403932 34404165 -51584769 + MIR SINE MIR 2 262 0 268 277 20 20 chr18 34404157 34404258 -51584676 - MIR SINE MIR -57 205 105 * 232 241 17 26 chr18 34404828 34404944 -51583990 + (TTTAA)n Simple_repeat Simple_repeat 1 115 0 573 219 73 8 chr18 34405732 34405855 -51583079 - MIR SINE MIR -103 159 29 2050 171 65 15 chr18 34407019 34407492 -51581442 - Charlie1a DNA MER1_type -1 1454 958 755 115 149 0 chr18 34407502 34407650 -51581284 - L1MA8 LINE L1 -7 6284 6115 415 225 124 8 chr18 34407651 34407780 -51581154 - Charlie1a DNA MER1_type -1228 227 84 2877 138 47 0 chr18 34407780 34408266 -51580668 - L1MA8 LINE L1 -237 6054 5546 3655 211 35 60 chr18 34408268 34408952 -51579982 - Charlie1a DNA MER1_type -1787 974 321 1655 110 127 8 chr18 34408952 34409197 -51579737 - AluSg SINE Alu -22 288 15 3655 211 35 60 chr18 34409197 34409505 -51579429 - Charlie1a DNA MER1_type -2440 321 7 743 311 60 16 chr18 34411048 34411296 -51577638 - MIR SINE MIR -2 260 2 242 254 91 97 chr18 34411578 34411630 -51577304 - L2 LINE L2 0 3313 3262 2155 121 3 0 chr18 34411630 34411937 -51576997 - AluSp SINE Alu -5 308 1 242 254 91 97 chr18 34411937 34411975 -51576959 - L2 LINE L2 -51 3262 3225 1037 179 9 36 chr18 34411975 34412199 -51576735 - MER20 DNA MER1_type 0 219 2 242 254 91 97 chr18 34412199 34412272 -51576662 - L2 LINE L2 -88 3225 3150 181 288 91 30 chr18 34413342 34413408 -51575526 - L2 LINE L2 -1 3271 3202 25 0 0 0 chr18 34413870 34413895 -51575039 + AT_rich Low_complexity Low_complexity 1 25 0 402 286 52 32 chr18 34414229 34414383 -51574551 - L3 LINE CR1 -239 1338 1182 422 78 0 16 chr18 34415282 34415346 -51573588 + (TTCC)n Simple_repeat Simple_repeat 2 64 0 2210 114 3 0 chr18 34415346 34415653 -51573281 - AluSc SINE Alu -1 308 1 22 0 0 0 chr18 34416866 34416888 -51572046 + AT_rich Low_complexity Low_complexity 1 22 0 2271 91 0 26 chr18 34419501 34419810 -51569124 - AluSc SINE Alu -8 301 1 866 265 142 13 chr18 34420062 34420379 -51568555 - MLT1J2 LTR MaLR -92 358 1 200 274 16 0 chr18 34420509 34420571 -51568363 - L2 LINE L2 -98 3215 3153 303 269 15 0 chr18 34420620 34420687 -51568247 + L2 LINE L2 3246 3313 0 611 344 54 38 chr18 34420758 34421312 -51567622 - L2 LINE L2 -195 3077 2520 22 35 0 0 chr18 34422302 34422331 -51566603 + AT_rich Low_complexity Low_complexity 1 29 0 186 171 0 0 chr18 34423178 34423219 -51565715 + (TG)n Simple_repeat Simple_repeat 2 42 0 218 250 100 0 chr18 34423416 34423476 -51565458 - L2 LINE L2 -7 3265 3200 422 274 26 0 chr18 34424066 34424179 -51564755 + MIR SINE MIR 147 262 0 362 376 76 21 chr18 34424331 34424578 -51564356 - L2 LINE L2 -1 3271 3004 1798 178 0 7 chr18 34424578 34424882 -51564052 + AluJo SINE Alu 1 302 -10 362 376 76 21 chr18 34424882 34424924 -51564010 - L2 LINE L2 -268 3004 2966 278 271 26 84 chr18 34424955 34425110 -51563824 - L2 LINE L2 -252 3020 2875 224 261 0 0 chr18 34425292 34425338 -51563596 - L2 LINE L2 -8 3264 3219 188 211 14 99 chr18 34425364 34425435 -51563499 - L2 LINE L2 0 3313 3249 2181 136 3 0 chr18 34426337 34426646 -51562288 + AluSx SINE Alu 1 310 -2 260 318 36 0 chr18 34427133 34427243 -51561691 - MIR SINE MIR -26 236 123 2313 92 3 0 chr18 34427530 34427823 -51561111 - AluSx SINE Alu -18 294 1 1834 172 7 3 chr18 34429668 34429970 -51558964 - AluSx SINE Alu -7 305 3 24 53 0 0 chr18 34430375 34430413 -51558521 + AT_rich Low_complexity Low_complexity 1 38 0 1650 191 7 7 chr18 34431141 34431440 -51557494 - AluSx SINE Alu -4 308 10 209 200 0 0 chr18 34431877 34431912 -51557022 + (TG)n Simple_repeat Simple_repeat 2 36 0 1724 148 22 3 chr18 34431954 34432271 -51556663 - MER33 DNA MER1_type -1 323 1 357 93 0 0 chr18 34432400 34432454 -51556480 + (CA)n Simple_repeat Simple_repeat 2 55 0 5187 121 59 17 chr18 34432977 34433844 -51555090 + MER4D LTR ERV1 1 903 0 556 287 96 76 chr18 34434677 34435085 -51553849 + Charlie8 DNA MER1_type 87 502 -1915 207 222 37 19 chr18 34435512 34435566 -51553368 - MIR SINE MIR 0 262 208 4211 207 92 28 chr18 34435670 34435940 -51552994 + Charlie1a DNA MER1_type 45 296 -2465 1819 162 0 34 chr18 34435940 34436261 -51552673 - AluJo SINE Alu -2 310 1 4211 207 92 28 chr18 34436261 34437181 -51551753 + Charlie1a DNA MER1_type 296 1311 -144 494 135 0 39 chr18 34437552 34437656 -51551278 + Charlie1a DNA MER1_type 1302 1401 -54 190 77 0 51 chr18 34437754 34437793 -51551141 + (TTC)n Simple_repeat Simple_repeat 2 38 0 42162 52 8 2 chr18 34438226 34444324 -51544610 - L1PA4 LINE L1 -7 6148 13 189 175 0 0 chr18 34444533 34444573 -51544361 + CT-rich Low_complexity Low_complexity 4 43 0 248 260 39 29 chr18 34445639 34445743 -51543191 + L1ME4a LINE L1 5973 6077 -44 1475 153 6 97 chr18 34445882 34446055 -51542879 - AluJb SINE Alu -11 301 169 192 40 0 0 chr18 34446055 34446080 -51542854 + (TTA)n Simple_repeat Simple_repeat 2 26 0 1475 153 6 97 chr18 34446080 34446226 -51542708 - AluJb SINE Alu -143 169 11 207 284 95 32 chr18 34447510 34447605 -51541329 - L2 LINE L2 -2 3270 3170 193 273 45 30 chr18 34447794 34447860 -51541074 + L3 LINE CR1 1279 1345 -232 947 160 41 41 chr18 34447898 34448117 -51540817 - MER20 DNA MER1_type 0 219 1 534 259 82 7 chr18 34448589 34448724 -51540210 - L2 LINE L2 -1 3312 3168 437 282 82 26 chr18 34448952 34449147 -51539787 - L3 LINE CR1 -95 1482 1277 1785 164 3 7 chr18 34449348 34449634 -51539300 + AluJo SINE Alu 1 285 -27 24 0 0 0 chr18 34450420 34450444 -51538490 + AT_rich Low_complexity Low_complexity 1 24 0 1791 148 136 0 chr18 34450679 34451009 -51537925 - THE1C LTR MaLR 0 375 1 330 280 50 0 chr18 34451959 34452059 -51536875 + MIR SINE MIR 40 144 -64 22 56 0 0 chr18 34452725 34452761 -51536173 + AT_rich Low_complexity Low_complexity 1 36 0 702 266 50 35 chr18 34453748 34454007 -51534927 + LTR33A LTR ERVL 258 520 -3 767 243 98 8 chr18 34454161 34454396 -51534538 - L1ME3A LINE L1 -13 6157 5902 5621 151 64 7 chr18 34454413 34454488 -51534446 - L1MC1 LINE L1 -6 6327 6258 391 18 36 0 chr18 34454488 34454544 -51534390 + (CA)n Simple_repeat Simple_repeat 2 59 0 5621 151 64 7 chr18 34454544 34455113 -51533821 - L1MC1 LINE L1 -75 6258 5723 423 57 143 0 chr18 34455113 34455183 -51533751 + MADE1 DNA Mariner 1 80 0 5621 151 64 7 chr18 34455183 34455640 -51533294 - L1MC1 LINE L1 -610 5723 5164 23 0 0 0 chr18 34455791 34455814 -51533120 + AT_rich Low_complexity Low_complexity 1 23 0 29 0 0 0 chr18 34456621 34456650 -51532284 + AT_rich Low_complexity Low_complexity 1 29 0 1281 81 46 0 chr18 34456932 34457105 -51531829 - MLT2A2 LTR ERVL -272 181 1 422 206 140 52 chr18 34457105 34457238 -51531696 - MLT1C LTR MaLR -306 161 17 1284 218 96 55 chr18 34457242 34457294 -51531640 - MLT2B1 LTR ERVL 0 464 416 180 0 0 0 chr18 34457294 34457314 -51531620 + (CA)n Simple_repeat Simple_repeat 1 20 0 1284 218 96 55 chr18 34457314 34457716 -51531218 - MLT2B1 LTR ERVL -48 416 1 238 254 0 18 chr18 34457841 34457896 -51531038 - MLT1L LTR MaLR -547 68 15 195 100 0 0 chr18 34457980 34458010 -51530924 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1121 356 186 24 chr18 34458382 34460342 -51528592 + L2 LINE L2 763 3046 -267 184 261 109 43 chr18 34461482 34461574 -51527360 - L3b LINE CR1 -269 1314 1217 292 183 0 134 chr18 34463631 34463713 -51525221 + MIR SINE MIR 84 141 -67 560 261 72 36 chr18 34463771 34463993 -51524941 + L1ME4a LINE L1 5621 5850 -271 323 137 0 0 chr18 34464131 34464182 -51524752 + MLT2A2 LTR ERVL 391 441 -12 1151 226 26 23 chr18 34464190 34464500 -51524434 + MLT1C LTR MaLR 157 467 0 499 294 51 40 chr18 34465384 34465561 -51523373 + MIR SINE MIR 16 190 -61 1014 229 19 0 chr18 34465625 34465839 -51523095 - MER20 DNA MER1_type -1 218 1 2320 90 0 3 chr18 34466138 34466438 -51522496 - AluSc SINE Alu -10 299 1 351 0 0 0 chr18 34468949 34468988 -51519946 + (CA)n Simple_repeat Simple_repeat 2 40 0 1325 82 6 6 chr18 34469375 34469546 -51519388 - AluSp SINE Alu -142 171 1 404 233 26 0 chr18 34469564 34469680 -51519254 + L1ME4a LINE L1 5979 6097 -24 22 35 0 0 chr18 34469769 34469798 -51519136 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr18 34470295 34470318 -51518616 + AT_rich Low_complexity Low_complexity 1 23 0 637 249 124 26 chr18 34472085 34472323 -51516611 - MIR SINE MIR 0 262 3 211 381 48 16 chr18 34472467 34472593 -51516341 - L2 LINE L2 -27 3245 3116 312 48 0 0 chr18 34473958 34474000 -51514934 + (TG)n Simple_repeat Simple_repeat 2 43 0 202 200 0 0 chr18 34476447 34476482 -51512452 + (ATG)n Simple_repeat Simple_repeat 2 36 0 4151 24 37 0 chr18 34476741 34477252 -51511682 - L1P LINE L1 -1302 4844 4315 2176 24 0 0 chr18 34477242 34477497 -51511437 + L1P LINE L1 4852 5106 -1040 * 211 319 0 14 chr18 34477685 34477754 -51511180 + L2 LINE L2 3190 3257 -15 189 0 0 0 chr18 34477758 34477779 -51511155 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 504 264 52 35 chr18 34478471 34478645 -51510289 + MIR SINE MIR 58 234 -28 303 176 14 4 chr18 34479512 34479584 -51509350 - MIR SINE MIR -63 145 73 731 297 96 4 chr18 34479872 34480111 -51508823 + MIR SINE MIR 2 262 0 235 316 0 51 chr18 34480132 34480211 -51508723 - L2 LINE L2 -10 3262 3188 31950 108 11 56 chr18 34480348 34486764 -51502170 + L1PA7 LINE L1 12 6130 -24 334 125 0 0 chr18 34486866 34486914 -51502020 + Alu SINE Alu 245 292 -9 21 36 0 0 chr18 34487592 34487620 -51501314 + AT_rich Low_complexity Low_complexity 1 28 0 2093 233 32 37 chr18 34488097 34488690 -51500244 - MLT1E3 LTR MaLR -2 622 33 234 300 33 33 chr18 34489926 34490016 -51498918 - L2 LINE L2 0 3313 3224 341 308 99 12 chr18 34490244 34490416 -51498518 + L2 LINE L2 2429 2615 -699 1634 221 140 87 chr18 34490418 34490608 -51498326 + MLT1E2 LTR MaLR 16 195 -431 2253 95 13 0 chr18 34490608 34490912 -51498022 + AluY SINE Alu 1 308 -3 1634 221 140 87 chr18 34490912 34491328 -51497606 + MLT1E2 LTR MaLR 195 626 0 2121 97 10 37 chr18 34491745 34492044 -51496890 - AluY SINE Alu -20 291 1 1252 276 39 19 chr18 34492094 34492691 -51496243 + L2 LINE L2 2703 3313 0 1830 133 36 77 chr18 34492901 34493292 -51495642 - THE1C LTR MaLR 0 375 1 727 156 99 0 chr18 34493848 34493989 -51494945 - L1MB4 LINE L1 -10 6170 6016 1568 71 0 25 chr18 34494211 34494435 -51494499 - AluY SINE Alu 0 309 91 380 265 128 0 chr18 34494454 34494571 -51494363 - L2 LINE L2 -6 3307 3176 183 186 42 195 chr18 34494613 34494731 -51494203 + L2 LINE L2 3171 3270 -2 24 32 0 0 chr18 34495507 34495538 -51493396 + AT_rich Low_complexity Low_complexity 1 31 0 227 274 24 57 chr18 34496125 34496249 -51492685 - LTR16C LTR ERVL -3 488 369 1219 124 39 17 chr18 34496658 34496891 -51492043 - L1MA7 LINE L1 -6 6285 6048 207 100 0 0 chr18 34497095 34497125 -51491809 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 271 281 91 58 chr18 34497561 34497682 -51491252 - L2 LINE L2 -1 3271 3147 23 0 0 0 chr18 34499335 34499358 -51489576 + AT_rich Low_complexity Low_complexity 1 23 0 315 325 9 9 chr18 34499493 34499607 -51489327 + MER5B DNA MER1_type 1 114 -64 2130 72 75 0 chr18 34500414 34500693 -51488241 - AluY SINE Alu -11 300 1 4234 26 0 0 chr18 34501015 34501509 -51487425 + L1PA2 LINE L1 5658 6151 -4 45 34 0 0 chr18 34501748 34501807 -51487127 + AT_rich Low_complexity Low_complexity 1 59 0 393 272 43 54 chr18 34502259 34502443 -51486491 + L1ME LINE L1 5481 5662 -459 2261 97 0 10 chr18 34502572 34502880 -51486054 + AluSq SINE Alu 1 305 -8 22 70 0 0 chr18 34503028 34503071 -51485863 + AT_rich Low_complexity Low_complexity 1 43 0 932 191 63 0 chr18 34503406 34503595 -51485339 + MER3 DNA MER1_type 6 206 -3 236 220 51 0 chr18 34505211 34505270 -51483664 - MIR SINE MIR -17 245 184 2065 114 0 51 chr18 34505342 34505658 -51483276 + AluSx SINE Alu 5 304 -8 559 223 25 0 chr18 34505679 34505800 -51483134 - MIR SINE MIR -75 187 64 285 229 29 0 chr18 34505871 34505941 -51482993 + MIR SINE MIR 190 261 -1 260 216 57 0 chr18 34508809 34508821 -51480113 - L1MA10 LINE L1 -2 6332 6321 1320 234 81 66 chr18 34508821 34509350 -51479584 - L1ME1 LINE L1 -5 6161 5625 185 317 87 19 chr18 34509514 34509618 -51479316 - MIR SINE MIR 0 262 152 480 258 61 91 chr18 34509855 34509909 -51479025 + L1ME LINE L1 5315 5369 -752 2365 105 0 0 chr18 34509909 34510222 -51478712 + AluSq SINE Alu 1 313 0 480 258 61 91 chr18 34510222 34510563 -51478371 + L1ME LINE L1 5369 5698 -423 1677 188 102 6 chr18 34510742 34511067 -51477867 - MSTB LTR MaLR -48 378 23 6944 62 1 4 chr18 34511067 34512554 -51476380 + L1PA7 LINE L1 4683 6153 -1 497 185 89 14 chr18 34512598 34512744 -51476190 - MSTB-int LTR MaLR 0 1651 1495 204 270 162 0 chr18 34513197 34513271 -51475663 + L2 LINE L2 3183 3268 -4 2242 170 80 21 chr18 34515184 34515649 -51473285 - MER67D LTR ERV1 0 514 23 2000 115 13 16 chr18 34516501 34516805 -51472129 - AluSx SINE Alu -9 303 1 263 220 102 42 chr18 34517681 34517799 -51471135 + L2 LINE L2 2266 2390 -924 219 125 0 0 chr18 34517902 34517942 -51470992 + (TC)n Simple_repeat Simple_repeat 1 40 0 396 0 0 0 chr18 34517949 34517993 -51470941 + (CA)n Simple_repeat Simple_repeat 1 44 0 203 147 0 0 chr18 34518240 34518274 -51470660 + (TTGG)n Simple_repeat Simple_repeat 1 34 0 184 186 34 0 chr18 34518315 34518374 -51470560 + GA-rich Low_complexity Low_complexity 2 62 0 771 333 37 10 chr18 34519016 34519310 -51469624 + L3 LINE CR1 376 677 -900 500 339 120 40 chr18 34520144 34520593 -51468341 + L3 LINE CR1 688 1172 -405 451 245 61 37 chr18 34520816 34520979 -51467955 + L3 LINE CR1 1243 1409 -168 278 328 78 9 chr18 34521049 34521165 -51467769 - MIR SINE MIR -74 188 65 234 340 0 68 chr18 34521202 34521305 -51467629 + L3 LINE CR1 1426 1521 -56 723 228 44 33 chr18 34522173 34522353 -51466581 - MIR SINE MIR 0 262 81 24 32 0 0 chr18 34522654 34522685 -51466249 + AT_rich Low_complexity Low_complexity 1 31 0 2291 39 21 0 chr18 34523224 34523505 -51465429 + L1PA5 LINE L1 5865 6151 -3 2435 120 92 2 chr18 34524284 34524677 -51464257 - MSTC LTR MaLR 0 428 1 234 141 31 16 chr18 34525134 34525198 -51463736 + A-rich Low_complexity Low_complexity 4 68 0 374 360 27 13 chr18 34525547 34525697 -51463237 - L2 LINE L2 -5 3267 3116 1813 152 22 34 chr18 34526352 34526550 -51462384 - MLT1A1 LTR MaLR -13 352 158 2271 98 10 0 chr18 34526550 34526845 -51462089 - AluSq SINE Alu -15 298 1 1813 152 22 34 chr18 34526845 34527002 -51461932 - MLT1A1 LTR MaLR -207 158 1 734 201 57 117 chr18 34527456 34527606 -51461328 + MER58D DNA MER1_type 21 142 -2278 1568 103 9 0 chr18 34527606 34527819 -51461115 - AluSq SINE Alu -11 302 88 734 201 57 117 chr18 34527819 34528002 -51460932 + MER58D DNA MER1_type 142 334 -52 243 179 89 0 chr18 34528324 34528380 -51460554 - MIR SINE MIR -79 183 123 232 138 46 46 chr18 34528433 34528498 -51460436 + L1MA9 LINE L1 6225 6289 -23 280 325 92 0 chr18 34528580 34528700 -51460234 + L2 LINE L2 3182 3312 -1 246 275 211 18 chr18 34529740 34529849 -51459085 - MER5A DNA MER1_type -1 188 59 239 258 65 0 chr18 34529898 34529960 -51458974 + MER5B DNA MER1_type 112 177 -1 211 267 100 44 chr18 34530059 34530149 -51458785 - MER5A DNA MER1_type -26 163 69 655 251 77 57 chr18 34531120 34531367 -51457567 - MIR SINE MIR -3 259 8 25 31 0 0 chr18 34531828 34531860 -51457074 + AT_rich Low_complexity Low_complexity 1 32 0 197 305 74 21 chr18 34531860 34531955 -51456979 - MIR SINE MIR -161 101 2 310 325 77 24 chr18 34532002 34532211 -51456723 + L2 LINE L2 2574 2793 -521 336 313 52 9 chr18 34532328 34532443 -51456491 + L2 LINE L2 3117 3236 -36 319 319 14 57 chr18 34532912 34533053 -51455881 - L2 LINE L2 -2 3270 3136 964 43 0 0 chr18 34533354 34533469 -51455465 - AluY SINE Alu -8 303 189 224 279 120 64 chr18 34533482 34533715 -51455219 - L2 LINE L2 -575 2739 2494 27 29 0 0 chr18 34534289 34534323 -51454611 + AT_rich Low_complexity Low_complexity 1 34 0 302 286 143 8 chr18 34534654 34534787 -51454147 - MIR3 SINE MIR -55 153 3 2106 187 40 83 chr18 34535450 34536054 -51452880 + L1ME1 LINE L1 5497 6074 -92 264 359 50 31 chr18 34536442 34536601 -51452333 + MIR SINE MIR 30 191 -71 519 289 21 0 chr18 34537609 34537751 -51451183 - MIR3 SINE MIR -6 202 58 21 0 0 0 chr18 34539464 34539485 -51449449 + AT_rich Low_complexity Low_complexity 1 21 0 1871 168 0 3 chr18 34540795 34541087 -51447847 - AluSx SINE Alu -21 291 1 253 239 125 11 chr18 34541580 34541668 -51447266 - MIR SINE MIR -85 177 80 259 265 36 12 chr18 34542980 34543063 -51445871 - L2 LINE L2 0 3272 3188 187 284 284 0 chr18 34543152 34543233 -51445701 + L2 LINE L2 3210 3313 0 34 43 0 29 chr18 34544272 34544300 -51444634 + AT_rich Low_complexity Low_complexity 1 28 -40 2197 102 3 3 chr18 34544300 34544595 -51444339 - AluSc SINE Alu -14 295 1 34 43 0 29 chr18 34544595 34544636 -51444298 + AT_rich Low_complexity Low_complexity 28 68 0 4515 176 40 7 chr18 34545669 34546584 -51442350 - MST-int LTR MaLR -82 1569 624 310 276 94 24 chr18 34546584 34546711 -51442223 + L1ME LINE L1 5578 5713 -408 263 242 0 0 chr18 34546771 34546837 -51442097 + L1ME LINE L1 5734 5799 -322 1948 152 0 7 chr18 34546853 34547150 -51441784 - AluSq SINE Alu -17 296 2 36 0 0 0 chr18 34547676 34547712 -51441222 + AT_rich Low_complexity Low_complexity 1 36 0 21 71 0 0 chr18 34547827 34547869 -51441065 + AT_rich Low_complexity Low_complexity 1 42 0 290 339 76 32 chr18 34548081 34548332 -51440602 - MLT1K LTR MaLR -233 355 94 332 336 55 7 chr18 34548448 34548594 -51440340 - MIR SINE MIR -69 193 41 213 274 284 10 chr18 34549800 34549902 -51439032 + MIR SINE MIR 6 135 -127 2780 10 0 0 chr18 34550484 34550786 -51438148 + AluYb8 SINE Alu 1 302 -16 421 257 147 0 chr18 34550959 34551095 -51437839 + L2 LINE L2 3117 3272 0 180 263 70 0 chr18 34551709 34551766 -51437168 + MIR3 SINE MIR 99 159 -49 392 213 11 0 chr18 34552025 34552119 -51436815 - MER53 DNA DNA -8 181 87 16677 62 5 1 chr18 34552124 34554288 -51434646 - HERVL-A1 LTR ERVL -3482 2172 1 2392 126 80 5 chr18 34554288 34554701 -51434233 - MLT2A1 LTR ERVL 0 444 1 1204 92 0 0 chr18 34554967 34555131 -51433803 - L1PA10 LINE L1 -4 6164 6001 218 297 142 68 chr18 34557100 34557467 -51431467 - L2 LINE L2 -47 3266 2873 260 287 43 17 chr18 34557551 34557666 -51431268 + L3 LINE CR1 911 1028 -549 1090 126 37 26 chr18 34558197 34558388 -51430546 - L1PA16 LINE L1 -6 6160 5968 182 314 74 83 chr18 34559007 34559128 -51429806 + MIR SINE MIR 39 158 -104 1328 190 11 37 chr18 34559844 34560112 -51428822 + AluJo SINE Alu 52 312 0 293 275 167 7 chr18 34561175 34561313 -51427621 + MIR SINE MIR 37 196 -66 294 324 67 0 chr18 34561385 34561490 -51427444 + MIR SINE MIR 3 114 -148 1911 174 161 5 chr18 34561494 34561909 -51427025 - MLT1D LTR MaLR 0 505 26 441 250 27 40 chr18 34561985 34562133 -51426801 + MIR SINE MIR 117 262 0 21 57 0 0 chr18 34562778 34562813 -51426121 + AT_rich Low_complexity Low_complexity 1 35 0 225 269 8 69 chr18 34563819 34563949 -51424985 + GA-rich Low_complexity Low_complexity 4 125 0 323 298 132 0 chr18 34564257 34564371 -51424563 + MIR SINE MIR 110 238 -24 261 155 0 0 chr18 34566368 34566426 -51422508 + (TA)n Simple_repeat Simple_repeat 2 59 0 5591 158 29 3 chr18 34566634 34568330 -51420604 - L1PB2 LINE L1 -1 6150 4387 249 33 0 0 chr18 34568330 34568360 -51420574 + (TTTTA)n Simple_repeat Simple_repeat 3 32 0 5591 158 29 3 chr18 34568360 34568719 -51420215 - L1PB2 LINE L1 -1764 4387 4039 321 26 0 0 chr18 34568930 34568968 -51419966 + (TAA)n Simple_repeat Simple_repeat 2 39 0 282 384 82 30 chr18 34570788 34571228 -51417706 + L2 LINE L2 2810 3272 0 190 279 44 44 chr18 34572370 34572438 -51416496 - L2 LINE L2 0 3272 3205 252 0 0 0 chr18 34572623 34572651 -51416283 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2845 10 0 0 chr18 34572657 34572968 -51415966 - AluYa5 SINE Alu 0 311 1 227 292 149 18 chr18 34573622 34573790 -51415144 + L2 LINE L2 3083 3272 -41 205 330 38 28 chr18 34573796 34573902 -51415032 + L2 LINE L2 3154 3260 -12 683 143 30 0 chr18 34573915 34574048 -51414886 - L1MA7 LINE L1 -1 6290 6154 227 292 149 18 chr18 34774625 34774793 -51214141 + L2 LINE L2 3083 3272 -41 205 330 38 28 chr18 34774799 34774905 -51214029 + L2 LINE L2 3154 3260 -12 749 137 29 0 chr18 34774918 34775057 -51213877 - L1MA7 LINE L1 -1 6290 6148 332 295 75 65 chr18 34775080 34775280 -51213654 - L2 LINE L2 -157 3115 2914 204 270 162 0 chr18 34776664 34776738 -51212196 + L2 LINE L2 3183 3268 -4 2092 170 80 21 chr18 34778651 34779116 -51209818 - MER67D LTR ERV1 0 514 23 2023 115 13 16 chr18 34779968 34780272 -51208662 - AluSx SINE Alu -9 303 1 265 220 102 42 chr18 34781148 34781266 -51207668 + L2 LINE L2 2266 2390 -924 219 125 0 0 chr18 34781369 34781409 -51207525 + (TC)n Simple_repeat Simple_repeat 1 40 0 396 0 0 0 chr18 34781416 34781460 -51207474 + (CA)n Simple_repeat Simple_repeat 1 44 0 203 147 0 0 chr18 34781707 34781741 -51207193 + (TTGG)n Simple_repeat Simple_repeat 1 34 0 184 186 34 0 chr18 34781782 34781841 -51207093 + GA-rich Low_complexity Low_complexity 2 62 0 777 333 37 10 chr18 34782483 34782777 -51206157 + L3 LINE CR1 376 677 -900 480 339 120 40 chr18 34783611 34784060 -51204874 + L3 LINE CR1 688 1172 -405 448 245 61 37 chr18 34784283 34784446 -51204488 + L3 LINE CR1 1243 1409 -168 278 328 78 9 chr18 34784516 34784632 -51204302 - MIR SINE MIR -74 188 65 234 340 0 68 chr18 34784669 34784772 -51204162 + L3 LINE CR1 1426 1521 -56 334 226 48 0 chr18 34785639 34785723 -51203211 - MIR SINE MIR 0 262 175 218 297 142 68 chr18 34787450 34787817 -51201117 - L2 LINE L2 -47 3266 2873 260 287 43 17 chr18 34787901 34788016 -51200918 + L3 LINE CR1 911 1028 -549 1090 126 37 26 chr18 34788551 34788742 -51200192 - L1PA16 LINE L1 -6 6160 5968 182 314 74 83 chr18 34789361 34789482 -51199452 + MIR SINE MIR 39 158 -104 1328 190 11 37 chr18 34790198 34790466 -51198468 + AluJo SINE Alu 52 312 0 293 275 167 7 chr18 34791529 34791667 -51197267 + MIR SINE MIR 37 196 -66 294 324 67 0 chr18 34791739 34791844 -51197090 + MIR SINE MIR 3 114 -148 1893 176 162 2 chr18 34791848 34792262 -51196672 - MLT1D LTR MaLR 0 505 26 441 250 27 40 chr18 34792338 34792486 -51196448 + MIR SINE MIR 117 262 0 21 57 0 0 chr18 34793131 34793166 -51195768 + AT_rich Low_complexity Low_complexity 1 35 0 225 269 8 69 chr18 34794172 34794302 -51194632 + GA-rich Low_complexity Low_complexity 4 125 0 323 298 132 0 chr18 34794610 34794724 -51194210 + MIR SINE MIR 110 238 -24 1167 92 6 0 chr18 34795502 34795665 -51193269 + L1PA10 LINE L1 6001 6164 -4 2392 126 80 5 chr18 34795931 34796344 -51192590 + MLT2A1 LTR ERVL 1 444 0 16677 62 5 1 chr18 34796344 34798508 -51190426 + HERVL-A1 LTR ERVL 1 2172 -3482 392 213 11 0 chr18 34798513 34798607 -51190327 + MER53 DNA DNA 87 181 -8 180 263 70 0 chr18 34798866 34798923 -51190011 - MIR3 SINE MIR -49 159 99 421 257 147 0 chr18 34799537 34799673 -51189261 - L2 LINE L2 0 3272 3117 2780 10 0 0 chr18 34799846 34800148 -51188786 - AluYb8 SINE Alu -16 302 1 332 336 55 7 chr18 34801893 34802039 -51186895 + MIR SINE MIR 41 193 -69 290 339 76 32 chr18 34802155 34802406 -51186528 + MLT1K LTR MaLR 94 355 -233 21 71 0 0 chr18 34802618 34802660 -51186274 + AT_rich Low_complexity Low_complexity 1 42 0 36 0 0 0 chr18 34802775 34802811 -51186123 + AT_rich Low_complexity Low_complexity 1 36 0 1948 152 0 7 chr18 34803337 34803634 -51185300 + AluSq SINE Alu 2 296 -17 263 242 0 0 chr18 34803650 34803716 -51185218 - L1ME LINE L1 -322 5799 5734 310 276 94 24 chr18 34803776 34803903 -51185031 - L1ME LINE L1 -408 5713 5578 4929 175 40 6 chr18 34803903 34804897 -51184037 + MST-int LTR MaLR 624 1651 0 4602 67 3 3 chr18 34804940 34805540 -51183394 - L1PA7 LINE L1 -1 6153 5554 2218 125 0 0 chr18 34805681 34805978 -51182956 + AluSx SINE Alu 1 297 -15 385 302 103 110 chr18 34806479 34806916 -51182018 + L2 LINE L2 2220 2653 -661 237 358 25 17 chr18 34807303 34807423 -51181511 + L2 LINE L2 3150 3270 -2 2269 92 3 3 chr18 34809223 34809516 -51179418 + AluSp SINE Alu 1 293 -20 487 258 77 36 chr18 34809575 34809796 -51179138 - L1ME4a LINE L1 -271 5850 5621 289 183 0 134 chr18 34809854 34809936 -51178998 - MIR SINE MIR -67 141 84 4796 69 1 13 chr18 34811785 34812635 -51176299 - L1P3 LINE L1 -630 5524 4687 1570 188 100 6 chr18 34812636 34812965 -51175969 + MSTB LTR MaLR 19 378 -48 464 249 71 91 chr18 34813144 34813485 -51175449 - L1ME LINE L1 -423 5698 5367 2392 105 0 0 chr18 34813485 34813798 -51175136 - AluSq SINE Alu 0 313 1 464 249 71 91 chr18 34813798 34813848 -51175086 - L1ME LINE L1 -754 5367 5318 185 317 87 19 chr18 34814089 34814193 -51174741 + MIR SINE MIR 152 262 0 1204 242 89 14 chr18 34814357 34814774 -51174160 + L1ME1 LINE L1 5625 6072 -94 198 0 0 0 chr18 34814783 34814805 -51174129 + (TG)n Simple_repeat Simple_repeat 1 22 0 1459 226 140 87 chr18 34817536 34817952 -51170982 - MLT1E2 LTR MaLR 0 626 195 2259 95 13 0 chr18 34817952 34818256 -51170678 - AluY SINE Alu -3 308 1 1459 226 140 87 chr18 34818256 34818446 -51170488 - MLT1E2 LTR MaLR -431 195 16 338 308 99 12 chr18 34818448 34818620 -51170314 - L2 LINE L2 -699 2615 2429 237 300 33 33 chr18 34818848 34818938 -51169996 + L2 LINE L2 3224 3313 0 2134 97 10 37 chr18 34819966 34820265 -51168669 - AluY SINE Alu -20 291 1 1266 276 39 19 chr18 34820315 34820912 -51168022 + L2 LINE L2 2703 3313 0 1836 133 36 77 chr18 34821122 34821513 -51167421 - THE1C LTR MaLR 0 375 1 684 156 99 0 chr18 34822069 34822210 -51166724 - L1MB4 LINE L1 -10 6170 6016 1568 71 0 25 chr18 34822432 34822656 -51166278 - AluY SINE Alu 0 309 91 381 265 128 0 chr18 34822675 34822792 -51166142 - L2 LINE L2 -6 3307 3176 182 186 42 195 chr18 34822834 34822952 -51165982 + L2 LINE L2 3171 3270 -2 24 32 0 0 chr18 34823728 34823759 -51165175 + AT_rich Low_complexity Low_complexity 1 31 0 1194 124 39 17 chr18 34824877 34825110 -51163824 - L1MA7 LINE L1 -6 6285 6048 207 100 0 0 chr18 34825314 34825344 -51163590 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 275 281 91 58 chr18 34825780 34825901 -51163033 - L2 LINE L2 -1 3271 3147 23 0 0 0 chr18 34827477 34827500 -51161434 + AT_rich Low_complexity Low_complexity 1 23 0 318 325 9 9 chr18 34827635 34827749 -51161185 + MER5B DNA MER1_type 1 114 -64 181 344 31 37 chr18 34828020 34828183 -51160751 + L2 LINE L2 2903 3064 -208 2165 68 75 0 chr18 34828555 34828834 -51160100 - AluY SINE Alu -11 300 1 243 179 89 0 chr18 34829160 34829216 -51159718 - MIR SINE MIR -79 183 123 279 354 61 7 chr18 34829451 34829598 -51159336 + L2 LINE L2 3158 3312 -1 246 275 211 18 chr18 34830638 34830747 -51158187 - MER5A DNA MER1_type -1 188 59 239 258 65 0 chr18 34830796 34830858 -51158076 + MER5B DNA MER1_type 112 177 -1 213 267 100 44 chr18 34830957 34831047 -51157887 - MER5A DNA MER1_type -26 163 69 655 251 77 57 chr18 34832018 34832265 -51156669 - MIR SINE MIR -3 259 8 25 31 0 0 chr18 34832726 34832758 -51156176 + AT_rich Low_complexity Low_complexity 1 32 0 197 305 74 21 chr18 34832758 34832853 -51156081 - MIR SINE MIR -161 101 2 310 325 77 24 chr18 34832900 34833109 -51155825 + L2 LINE L2 2574 2793 -521 336 313 52 9 chr18 34833226 34833341 -51155593 + L2 LINE L2 3117 3236 -36 319 319 14 57 chr18 34833810 34833951 -51154983 - L2 LINE L2 -2 3270 3136 180 0 0 0 chr18 34834252 34834272 -51154662 + (T)n Simple_repeat Simple_repeat 1 20 0 259 265 36 12 chr18 34834556 34834639 -51154295 - L2 LINE L2 0 3272 3188 187 284 284 0 chr18 34834728 34834809 -51154125 + L2 LINE L2 3210 3313 0 34 43 0 29 chr18 34835852 34835880 -51153054 + AT_rich Low_complexity Low_complexity 1 28 -40 2197 102 3 3 chr18 34835880 34836175 -51152759 - AluSc SINE Alu -14 295 1 34 43 0 29 chr18 34836175 34836216 -51152718 + AT_rich Low_complexity Low_complexity 28 68 0 24 32 0 0 chr18 34836805 34836836 -51152098 + AT_rich Low_complexity Low_complexity 1 31 0 2299 39 21 0 chr18 34837375 34837656 -51151278 + L1PA5 LINE L1 5865 6151 -3 2410 122 92 2 chr18 34838435 34838828 -51150106 - MSTC LTR MaLR 0 428 1 234 141 31 16 chr18 34839404 34839468 -51149466 + A-rich Low_complexity Low_complexity 4 68 0 374 360 27 13 chr18 34839815 34839965 -51148969 - L2 LINE L2 -5 3267 3116 1813 152 22 34 chr18 34840620 34840818 -51148116 - MLT1A1 LTR MaLR -13 352 158 2271 98 10 0 chr18 34840818 34841113 -51147821 - AluSq SINE Alu -15 298 1 1813 152 22 34 chr18 34841113 34841270 -51147664 - MLT1A1 LTR MaLR -207 158 1 444 228 70 0 chr18 34841771 34841885 -51147049 + L1ME1 LINE L1 5953 6074 -92 264 359 50 31 chr18 34842273 34842432 -51146502 + MIR SINE MIR 30 191 -71 519 289 21 0 chr18 34843440 34843582 -51145352 - MIR3 SINE MIR -6 202 58 21 0 0 0 chr18 34845317 34845338 -51143596 + AT_rich Low_complexity Low_complexity 1 21 0 1871 164 0 3 chr18 34846648 34846940 -51141994 - AluJb SINE Alu -21 291 1 253 239 125 11 chr18 34847433 34847521 -51141413 - MIR SINE MIR -85 177 80 261 155 0 0 chr18 34849941 34849999 -51138935 + (TA)n Simple_repeat Simple_repeat 2 59 0 4896 197 41 3 chr18 34850207 34851888 -51137046 - L1PB2 LINE L1 -1 6150 4383 249 33 0 0 chr18 34851888 34851918 -51137016 + (TTTTA)n Simple_repeat Simple_repeat 3 32 0 4896 197 41 3 chr18 34851918 34852277 -51136657 - L1PB2 LINE L1 -1768 4383 4039 321 26 0 0 chr18 34852488 34852526 -51136408 + (TAA)n Simple_repeat Simple_repeat 2 39 0 282 384 82 30 chr18 34854424 34854864 -51134070 + L2 LINE L2 2810 3272 0 190 279 44 44 chr18 34856006 34856074 -51132860 - L2 LINE L2 0 3272 3205 252 0 0 0 chr18 34856259 34856287 -51132647 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2845 10 0 0 chr18 34856293 34856604 -51132330 - AluYa5 SINE Alu 0 311 1 637 249 124 26 chr18 34858067 34858305 -51130629 - MIR SINE MIR 0 262 3 215 381 48 16 chr18 34858449 34858575 -51130359 - L2 LINE L2 -27 3245 3116 531 231 25 0 chr18 34858775 34858896 -51130038 + MIR SINE MIR 64 187 -75 2087 114 0 51 chr18 34858917 34859233 -51129701 - AluSx SINE Alu -8 304 5 233 220 51 0 chr18 34859305 34859364 -51129570 + MIR SINE MIR 184 245 -17 870 190 39 0 chr18 34860981 34861160 -51127774 - MER3 DNA MER1_type -3 206 21 21 36 0 0 chr18 34861512 34861540 -51127394 + AT_rich Low_complexity Low_complexity 1 28 0 2286 82 0 3 chr18 34862219 34862510 -51126424 - AluY SINE Alu -19 292 3 352 194 0 0 chr18 34862552 34862624 -51126310 - MER58 DNA MER1_type -52 2368 2297 280 284 80 0 chr18 34862728 34862816 -51126118 - MIR SINE MIR 0 262 168 1821 128 75 31 chr18 34862818 34863177 -51125757 - THE1C LTR MaLR 0 375 1 1510 147 128 8 chr18 34863625 34863891 -51125043 + AluJb SINE Alu 1 298 -14 2194 82 38 7 chr18 34864005 34864296 -51124638 + AluSg SINE Alu 1 300 -10 203 0 37 0 chr18 34864697 34864724 -51124210 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 213 39 0 0 chr18 34865442 34865468 -51123466 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 368 246 32 91 chr18 34865539 34865726 -51123208 + MER5A DNA MER1_type 7 182 -7 417 291 16 16 chr18 34865778 34865905 -51123029 + MIR3 SINE MIR 12 138 -70 198 0 0 0 chr18 34866509 34866531 -51122403 + (T)n Simple_repeat Simple_repeat 1 22 0 237 326 72 9 chr18 34867043 34867264 -51121670 - MLT1L LTR MaLR -376 239 5 978 131 55 0 chr18 34867972 34868150 -51120784 + AluSg/x SINE Alu 135 320 0 274 250 89 18 chr18 34868521 34868633 -51120301 - MER91C DNA MER1_type -1 139 20 2831 106 14 31 chr18 34869003 34869485 -51119449 + L1MA5 LINE L1 5800 6273 -27 224 279 120 64 chr18 34871005 34871238 -51117696 - L2 LINE L2 -575 2739 2494 27 29 0 0 chr18 34871812 34871846 -51117088 + AT_rich Low_complexity Low_complexity 1 34 0 302 286 143 8 chr18 34872177 34872310 -51116624 - MIR3 SINE MIR -55 153 3 1899 230 34 37 chr18 34872944 34873536 -51115398 + MLT1E3 LTR MaLR 33 622 -2 450 202 0 0 chr18 34875182 34875276 -51113658 + FLAM_C SINE Alu 41 134 -9 29 0 0 0 chr18 34875276 34875305 -51113629 + AT_rich Low_complexity Low_complexity 1 29 0 630 37 0 12 chr18 34880116 34880197 -51108737 + MADE1 DNA Mariner 1 80 0 295 361 48 13 chr18 34880385 34880612 -51108322 + L2 LINE L2 2599 2833 -481 189 107 0 0 chr18 34882795 34882823 -51106111 + (TG)n Simple_repeat Simple_repeat 2 29 0 2376 61 0 3 chr18 34884359 34884656 -51104278 + AluY SINE Alu 1 296 -15 618 39 0 0 chr18 34884668 34884746 -51104188 + L1PA8 LINE L1 6090 6167 -5 418 152 0 0 chr18 34884913 34884979 -51103955 - FLAM SINE Alu -10 133 68 180 0 0 0 chr18 34885098 34885118 -51103816 + (A)n Simple_repeat Simple_repeat 1 20 0 209 161 0 0 chr18 34885156 34885187 -51103747 + (CA)n Simple_repeat Simple_repeat 2 32 0 895 110 7 14 chr18 34886398 34886543 -51102391 - L1PB1 LINE L1 -2 6149 6006 210 244 0 0 chr18 34890836 34890877 -51098057 + (TG)n Simple_repeat Simple_repeat 2 42 0 2183 121 0 0 chr18 34891650 34891947 -51096987 + AluSq SINE Alu 1 297 -16 288 0 0 0 chr18 34893569 34893601 -51095333 + (TG)n Simple_repeat Simple_repeat 1 32 0 2535 148 19 21 chr18 34894308 34894378 -51094556 - MSTB1 LTR MaLR 0 432 363 2291 93 0 23 chr18 34894378 34894680 -51094254 + AluSq SINE Alu 1 295 -18 2535 148 19 21 chr18 34894680 34895042 -51093892 - MSTB1 LTR MaLR -69 363 1 190 113 19 38 chr18 34895672 34895725 -51093209 + GA-rich Low_complexity Low_complexity 3 54 0 2320 88 17 0 chr18 34896535 34896831 -51092103 + AluSx SINE Alu 1 301 -11 180 0 0 0 chr18 34896998 34897018 -51091916 + (A)n Simple_repeat Simple_repeat 1 20 0 24 85 0 0 chr18 34897705 34897764 -51091170 + AT_rich Low_complexity Low_complexity 1 59 0 375 123 62 0 chr18 34900175 34900240 -51088694 - MADE1 DNA Mariner -10 70 2 183 80 0 0 chr18 34901335 34901360 -51087574 + (TAA)n Simple_repeat Simple_repeat 3 27 0 400 332 91 27 chr18 34901370 34901590 -51087344 - MIR SINE MIR -21 241 8 377 275 61 8 chr18 34901935 34902066 -51086868 - MIR SINE MIR -56 206 69 564 341 22 75 chr18 34902785 34903391 -51085543 + L2 LINE L2 2731 3303 -10 1735 161 73 27 chr18 34903743 34904115 -51084819 - MLT1B LTR MaLR 0 390 2 26 0 0 0 chr18 34905806 34905832 -51083102 + AT_rich Low_complexity Low_complexity 1 26 0 389 335 43 12 chr18 34906458 34906619 -51082315 + MER5A DNA MER1_type 24 189 0 232 229 12 72 chr18 34906718 34906801 -51082133 - MIR SINE MIR -1 261 184 1579 219 139 39 chr18 34907745 34908233 -51080701 - MLT1F1 LTR MaLR 0 567 31 185 191 270 0 chr18 34909783 34909846 -51079088 + MIR SINE MIR 59 138 -70 727 312 58 15 chr18 34909937 34910264 -51078670 + MER102b DNA MER1_type 1 341 0 255 344 0 0 chr18 34911037 34911127 -51077807 + L1MC4a LINE L1 5839 5928 -1880 2170 121 7 0 chr18 34911446 34911751 -51077183 - AluSx SINE Alu -5 307 1 843 262 127 47 chr18 34912828 34913425 -51075509 + L2 LINE L2 2662 3307 -6 490 56 0 122 chr18 34913495 34913585 -51075349 + MADE1 DNA Mariner 2 80 0 33 0 0 0 chr18 34914000 34914033 -51074901 + AT_rich Low_complexity Low_complexity 1 33 0 325 200 0 71 chr18 34915226 34915311 -51073623 - MIR SINE MIR -58 204 126 573 321 32 14 chr18 34916939 34917160 -51071774 + MIR SINE MIR 28 252 -10 2147 127 3 0 chr18 34918961 34919260 -51069674 - AluSq SINE Alu -13 300 1 211 238 0 0 chr18 34919514 34919556 -51069378 - L3 LINE CR1 -6 1571 1530 2229 126 49 30 chr18 34919556 34920096 -51068838 - MER51A LTR ERV1 0 634 1 1283 89 0 11 chr18 34920375 34920577 -51068357 - AluSg/x SINE Alu 0 309 119 180 0 0 0 chr18 34920577 34920597 -51068337 + (T)n Simple_repeat Simple_repeat 1 20 0 312 48 0 0 chr18 34920836 34920878 -51068056 + (TG)n Simple_repeat Simple_repeat 2 43 0 202 200 0 0 chr18 34923324 34923359 -51065575 + (ATG)n Simple_repeat Simple_repeat 2 36 0 4126 22 32 0 chr18 34923618 34924119 -51064815 - L1PA2 LINE L1 -1302 4844 4328 7354 18 31 1 chr18 34924119 34925393 -51063541 + L1PA2 LINE L1 4852 6151 -4 45 34 0 0 chr18 34925632 34925691 -51063243 + AT_rich Low_complexity Low_complexity 1 59 0 350 272 43 54 chr18 34926143 34926327 -51062607 + L1ME LINE L1 5481 5662 -459 981 105 0 0 chr18 34926456 34926589 -51062345 + AluSq/x SINE Alu 1 133 -179 1615 188 7 10 chr18 34926592 34926901 -51062033 + AluJo SINE Alu 1 308 -4 213 303 0 15 chr18 34927720 34927786 -51061148 + L2 LINE L2 3206 3270 -2 2558 29 0 13 chr18 34928321 34928628 -51060306 - AluY SINE Alu -8 303 1 243 167 39 29 chr18 34929319 34929421 -51059513 + CT-rich Low_complexity Low_complexity 3 105 0 261 0 0 0 chr18 34931067 34931096 -51057838 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 225 65 0 0 chr18 34933373 34933404 -51055530 + (CA)n Simple_repeat Simple_repeat 2 32 0 2476 34 0 17 chr18 34933812 34934106 -51054828 + AluY SINE Alu 1 289 -22 21 57 0 0 chr18 34934605 34934640 -51054294 + AT_rich Low_complexity Low_complexity 1 35 0 393 247 10 0 chr18 34936496 34936593 -51052341 - MER46C DNA MER2_type -2 336 239 282 130 0 37 chr18 34936641 34936695 -51052239 - MER46C DNA MER2_type -286 52 1 549 270 79 6 chr18 34936959 34937151 -51051783 + MIR SINE MIR 16 212 -50 258 352 56 24 chr18 34937608 34937821 -51051113 + MIR SINE MIR 40 259 -3 298 291 97 20 chr18 34940494 34940741 -51048193 + L1MC/D LINE L1 5267 5532 -2276 27 29 0 0 chr18 34941008 34941042 -51047892 + AT_rich Low_complexity Low_complexity 1 34 0 349 219 67 25 chr18 34941444 34941563 -51047371 - MER94 DNA DNA -1 133 10 1695 151 46 23 chr18 34942032 34942337 -51046597 - AluJo SINE Alu 0 312 1 331 216 22 60 chr18 34942365 34942499 -51046435 - L1ME4a LINE L1 -6 6115 5987 593 154 0 10 chr18 34942548 34942652 -51046282 - FLAM_C SINE Alu -14 129 27 216 0 0 0 chr18 34945510 34945534 -51043400 + (T)n Simple_repeat Simple_repeat 1 24 0 214 208 57 0 chr18 34945625 34945678 -51043256 + (TATG)n Simple_repeat Simple_repeat 2 57 0 2162 124 0 3 chr18 34946446 34946736 -51042198 - AluSg SINE Alu -17 293 5 2086 143 7 0 chr18 34947372 34947680 -51041254 - AluJo SINE Alu 0 312 3 22 70 0 0 chr18 34948358 34948401 -51040533 + AT_rich Low_complexity Low_complexity 1 43 0 28 0 0 0 chr18 34949411 34949439 -51039495 + AT_rich Low_complexity Low_complexity 1 28 0 287 358 68 0 chr18 34949545 34949693 -51039241 + MIR SINE MIR 12 169 -93 219 69 0 0 chr18 34951701 34951730 -51037204 + (TG)n Simple_repeat Simple_repeat 1 29 0 1026 193 11 0 chr18 34953307 34953494 -51035440 + MER5A DNA MER1_type 1 189 0 225 0 0 0 chr18 34955339 34955364 -51033570 + (TG)n Simple_repeat Simple_repeat 2 26 0 185 301 14 27 chr18 34955828 34955901 -51033033 + L2 LINE L2 3201 3272 0 1154 97 10 26 chr18 34956036 34956231 -51032703 + L1MA10 LINE L1 6140 6331 -3 240 247 0 82 chr18 34956783 34956856 -51032078 - MER5A DNA MER1_type -83 106 40 192 197 28 113 chr18 34956802 34956873 -51032061 + MER5A DNA MER1_type 114 178 -11 * 258 192 39 0 chr18 34956899 34956951 -51031983 + MER5A DNA MER1_type 4 57 -132 787 216 23 12 chr18 34956992 34957163 -51031771 - MER21B LTR ERV1 -667 196 24 2460 157 28 4 chr18 34957194 34957666 -51031268 - L1M4c LINE L1 -4537 1847 1365 1144 279 121 22 chr18 34957694 34958106 -51030828 - L2 LINE L2 -671 2643 2191 1182 80 0 0 chr18 34958358 34958533 -51030401 + L1P LINE L1 1245 1419 -4727 42378 37 1 1 chr18 34958847 34965001 -51023933 + L1PA3 LINE L1 3 6155 0 209 280 70 50 chr18 34965127 34965227 -51023707 + MIR SINE MIR 150 251 -11 2677 176 41 40 chr18 34965759 34966038 -51022896 + L1MB8 LINE L1 5538 5815 -363 2138 122 7 7 chr18 34966038 34966333 -51022601 + AluSx SINE Alu 1 295 -17 2677 176 41 40 chr18 34966333 34966684 -51022250 + L1MB8 LINE L1 5815 6169 -9 1962 243 142 10 chr18 34966862 34967565 -51021369 + HAL1 LINE L1 118 913 -1594 295 270 40 14 chr18 34967673 34967747 -51021187 - MLT1J2 LTR MaLR -98 352 277 723 231 99 62 chr18 34967842 34967901 -51021033 + HAL1 LINE L1 2016 2071 -436 2113 106 7 3 chr18 34967901 34968262 -51020672 + AluSq SINE Alu 1 362 0 723 231 99 62 chr18 34968262 34968573 -51020361 + HAL1 LINE L1 2071 2401 -106 283 257 79 40 chr18 34968623 34968775 -51020159 + L1ME4a LINE L1 5957 6114 -7 2369 120 21 24 chr18 34969093 34969469 -51019465 - THE1C LTR MaLR 0 375 1 9635 107 58 38 chr18 34969469 34971018 -51017916 - THE1C-int LTR MaLR 0 1580 1 2578 106 13 16 chr18 34971018 34971394 -51017540 - THE1C LTR MaLR 0 375 1 222 220 0 20 chr18 34971529 34971579 -51017355 + CT-rich Low_complexity Low_complexity 2 50 0 258 274 170 7 chr18 34971671 34971806 -51017128 - MIR SINE MIR -72 190 34 1177 150 0 0 chr18 34972567 34972740 -51016194 - FRAM SINE Alu -5 171 1 216 0 0 0 chr18 34972741 34972765 -51016169 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 1795 166 14 0 chr18 34972765 34973043 -51015891 - AluJb SINE Alu -30 282 1 1102 218 125 22 chr18 34973335 34973647 -51015287 + MER2 DNA MER2_type 1 344 0 330 233 33 0 chr18 34974276 34974366 -51014568 - MER81 DNA DNA -21 93 1 2027 131 0 13 chr18 34976499 34976804 -51012130 - AluSx SINE Alu 0 312 12 450 0 0 0 chr18 34978142 34978192 -51010742 + (TA)n Simple_repeat Simple_repeat 2 51 0 78 12 0 0 chr18 34979409 34979494 -51009440 + AT_rich Low_complexity Low_complexity 1 85 0 260 126 52 40 chr18 34979500 34979674 -51009260 + (TTATA)n Simple_repeat Simple_repeat 5 180 0 241 88 126 0 chr18 34979643 34979802 -51009132 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 24 0 0 0 chr18 34979816 34979840 -51009094 + AT_rich Low_complexity Low_complexity 1 24 0 229 98 115 0 chr18 34979840 34979901 -51009033 + (TTTAA)n Simple_repeat Simple_repeat 5 72 0 432 296 45 8 chr18 34980170 34980302 -51008632 - MIR SINE MIR -79 183 47 4950 91 0 1 chr18 34980481 34981170 -51007764 + L1PA12 LINE L1 5481 6168 0 346 190 30 0 chr18 34981271 34981371 -51007563 + (TTTA)n Simple_repeat Simple_repeat 4 106 0 26 50 0 0 chr18 34982422 34982462 -51006472 + AT_rich Low_complexity Low_complexity 1 40 0 284 62 0 21 chr18 34982477 34982525 -51006409 + (TTTTA)n Simple_repeat Simple_repeat 4 50 0 2340 84 0 0 chr18 34983800 34984098 -51004836 - AluSq SINE Alu -15 298 1 2393 81 0 0 chr18 34984104 34984423 -51004511 - AluSc SINE Alu 0 309 5 180 0 0 0 chr18 34985224 34985244 -51003690 + (A)n Simple_repeat Simple_repeat 1 20 0 247 395 0 0 chr18 34985926 34986007 -51002927 + MIR SINE MIR 37 117 -91 739 301 117 48 chr18 34986014 34986426 -51002508 - MLT1J2 LTR MaLR -6 444 1 21 0 0 0 chr18 34986649 34986670 -51002264 + AT_rich Low_complexity Low_complexity 1 21 0 1843 160 3 14 chr18 34986672 34986965 -51001969 + AluJb SINE Alu 3 292 -20 23 33 0 0 chr18 34987499 34987529 -51001405 + AT_rich Low_complexity Low_complexity 1 30 0 227 337 17 12 chr18 34987858 34988030 -51000904 + A-rich Low_complexity Low_complexity 6 178 0 1089 240 67 15 chr18 34988030 34988359 -51000575 + L1M4c LINE L1 1380 1725 -4659 419 312 19 48 chr18 34988340 34988416 -51000518 + HAL1b LINE L1 385 462 -886 * 2430 171 0 5 chr18 34988416 34988814 -51000120 - MSTD LTR MaLR 0 396 1 419 312 19 48 chr18 34988814 34989006 -50999928 + HAL1b LINE L1 462 645 -703 4181 270 58 63 chr18 34989075 34989886 -50999048 + L1MC4a LINE L1 5531 6345 -1463 2187 103 3 29 chr18 34989886 34990196 -50998738 - AluSx SINE Alu -10 302 1 4181 270 58 63 chr18 34990196 34990224 -50998710 + L1MC4a LINE L1 6345 6372 -1436 2194 106 7 3 chr18 34990224 34990516 -50998418 + AluSc SINE Alu 1 293 -16 4181 270 58 63 chr18 34990516 34991866 -50997068 + L1MC4a LINE L1 6372 7709 -99 303 255 38 38 chr18 34991869 34991975 -50996959 + L1MC4 LINE L1 7807 7912 -130 260 178 14 0 chr18 34992003 34992076 -50996858 + GA-rich Low_complexity Low_complexity 2 75 0 410 252 0 49 chr18 34992082 34992205 -50996729 + L1MC4 LINE L1 7922 8038 -4 297 326 16 23 chr18 34992565 34992694 -50996240 + MLT1K LTR MaLR 342 469 -119 504 282 80 77 chr18 34992707 34993097 -50995837 + L2 LINE L2 2923 3313 0 192 325 12 72 chr18 34993226 34993309 -50995625 + L2 LINE L2 3174 3251 -21 205 138 0 0 chr18 34993538 34993567 -50995367 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 205 138 0 0 chr18 34993827 34993856 -50995078 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 210 259 18 4 chr18 34994141 34994211 -50994723 + MIR SINE MIR 92 145 -63 3046 140 13 10 chr18 34994923 34995445 -50993489 + L1MA9 LINE L1 5789 6312 0 723 222 48 55 chr18 34995471 34995713 -50993221 + MIR SINE MIR 18 262 0 22 0 0 0 chr18 34995731 34995753 -50993181 + AT_rich Low_complexity Low_complexity 1 22 0 184 267 217 8 chr18 34996510 34996630 -50992304 - L2 LINE L2 -1 3312 3168 203 289 0 26 chr18 34996801 34996877 -50992057 + MIR SINE MIR 183 256 -6 463 295 86 86 chr18 34997314 34997650 -50991284 - MLT1I LTR MaLR -3 406 71 196 319 42 0 chr18 34997820 34997892 -50991042 + L2 LINE L2 3221 3295 -18 24 53 0 0 chr18 34998248 34998286 -50990648 + AT_rich Low_complexity Low_complexity 1 38 0 2281 73 0 23 chr18 34999106 34999409 -50989525 - AluY SINE Alu -14 297 2 22 0 0 0 chr18 34999791 34999813 -50989121 + AT_rich Low_complexity Low_complexity 1 22 0 3191 193 52 7 chr18 35002202 35002820 -50986114 + MER82 DNA MER2_type 2 647 -6 1214 240 58 21 chr18 35003781 35004297 -50984637 + L1ME1 LINE L1 3068 3602 -2544 3495 232 49 26 chr18 35004310 35004788 -50984146 + L1ME1 LINE L1 4549 5014 -1152 1888 111 11 0 chr18 35004788 35005058 -50983876 - AluSp SINE Alu -2 311 39 3495 232 49 26 chr18 35005058 35006161 -50982773 + L1ME1 LINE L1 5014 6161 -5 271 54 0 27 chr18 35006234 35006291 -50982643 + L1PA6 LINE L1 6097 6148 -6 25 0 0 0 chr18 35006418 35006443 -50982491 + AT_rich Low_complexity Low_complexity 1 25 0 691 335 77 21 chr18 35006604 35007127 -50981807 + L2 LINE L2 1618 2169 -1145 336 343 147 14 chr18 35007370 35007662 -50981272 + L2 LINE L2 2554 2884 -430 312 277 10 10 chr18 35007855 35007956 -50980978 - MIR3 SINE MIR -25 183 83 218 247 13 0 chr18 35009110 35009187 -50979747 + GA-rich Low_complexity Low_complexity 3 80 0 287 100 0 83 chr18 35009193 35009253 -50979681 + L1ME4a LINE L1 6066 6120 -1 21 0 0 0 chr18 35009253 35009274 -50979660 + AT_rich Low_complexity Low_complexity 1 21 0 180 265 0 0 chr18 35009601 35009635 -50979299 - L2 LINE L2 -1406 1908 1875 250 186 34 0 chr18 35009648 35009707 -50979227 + L1MC/D LINE L1 4886 4946 -1200 865 229 106 20 chr18 35009733 35010169 -50978765 + L1MC/D LINE L1 5055 5518 -765 1544 112 95 95 chr18 35010222 35010516 -50978418 + AluSx SINE Alu 1 294 -18 23 33 0 0 chr18 35010519 35010549 -50978385 + AT_rich Low_complexity Low_complexity 1 30 0 553 247 122 28 chr18 35010709 35010917 -50978017 + MIR SINE MIR 2 211 -51 1743 184 10 0 chr18 35011208 35011507 -50977427 + AluJo SINE Alu 1 302 -10 25 0 0 0 chr18 35011554 35011579 -50977355 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr18 35012783 35012804 -50976130 + AT_rich Low_complexity Low_complexity 1 21 0 618 250 147 0 chr18 35013082 35013238 -50975696 - MER5A DNA MER1_type 0 189 11 4391 179 67 37 chr18 35014069 35014159 -50974775 - Charlie1a DNA MER1_type -1382 1379 1293 2198 107 17 3 chr18 35014159 35014457 -50974477 + AluSq SINE Alu 1 302 -11 4391 179 67 37 chr18 35014457 35014672 -50974262 - Charlie1a DNA MER1_type -1468 1293 1086 2530 51 3 0 chr18 35014672 35014965 -50973969 - AluY SINE Alu -15 296 3 4391 179 67 37 chr18 35014965 35015753 -50973181 - Charlie1a DNA MER1_type -1675 1086 253 687 174 0 0 chr18 35015768 35015877 -50973057 - Charlie1a DNA MER1_type -1308 147 39 701 233 96 42 chr18 35016127 35016367 -50972567 + MIR SINE MIR 10 262 0 1823 154 7 0 chr18 35016377 35016699 -50972235 - AluJb SINE Alu 0 324 1 216 266 31 16 chr18 35017038 35017102 -50971832 + L2 LINE L2 3201 3265 -7 5619 186 4 5 chr18 35018897 35019977 -50968957 - L1P LINE L1 -1440 4706 3628 2851 128 6 13 chr18 35019977 35020444 -50968490 + L1PA15 LINE L1 5697 6163 -2 1288 239 46 15 chr18 35021625 35021952 -50966982 + LTR16C LTR ERVL 152 488 -3 1138 243 147 16 chr18 35022280 35022647 -50966287 + LTR16C LTR ERVL 73 487 -4 26 30 0 0 chr18 35023396 35023429 -50965505 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr18 35024075 35024097 -50964837 + AT_rich Low_complexity Low_complexity 1 22 0 210 309 49 0 chr18 35024695 35024776 -50964158 + L2 LINE L2 1337 1421 -1893 199 414 8 31 chr18 35024797 35024925 -50964009 - L2 LINE L2 -7 3265 3141 216 0 0 0 chr18 35025443 35025467 -50963467 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 941 239 89 12 chr18 35025515 35025762 -50963172 - MLT1H1 LTR MaLR 0 555 290 551 301 77 0 chr18 35025810 35026019 -50962915 - L2 LINE L2 -11 3302 3078 463 211 40 74 chr18 35027339 35027385 -50961549 - MER104 DNA Tc2 -1723 175 129 1783 180 49 0 chr18 35027385 35027773 -50961161 - L1MA4 LINE L1 -9 6291 5885 463 211 40 74 chr18 35027773 35027901 -50961033 - MER104 DNA Tc2 -1769 129 7 2340 100 3 0 chr18 35028247 35028548 -50960386 - AluSq SINE Alu -11 302 1 360 89 0 0 chr18 35028728 35028784 -50960150 + MLT2C2 LTR ERVL 1 56 -408 222 37 0 0 chr18 35028803 35028830 -50960104 + (CA)n Simple_repeat Simple_repeat 2 28 0 1872 102 14 29 chr18 35028898 35029173 -50959761 + AluSx SINE Alu 36 306 -6 471 265 15 29 chr18 35030873 35031009 -50957925 - L2 LINE L2 0 3313 3180 22 0 0 0 chr18 35031106 35031128 -50957806 + AT_rich Low_complexity Low_complexity 1 22 0 3105 220 67 9 chr18 35031274 35032016 -50956918 - MER21B LTR ERV1 -60 803 19 399 204 11 21 chr18 35032036 35032129 -50956805 - MER21B LTR ERV1 -771 92 1 2095 148 0 0 chr18 35032301 35032599 -50956335 + AluSx SINE Alu 1 298 -14 416 306 100 77 chr18 35033014 35033220 -50955714 + L2 LINE L2 2230 2430 -884 225 0 0 0 chr18 35033220 35033245 -50955689 + (TC)n Simple_repeat Simple_repeat 1 25 0 416 306 100 77 chr18 35033245 35033557 -50955377 + L2 LINE L2 2430 2760 -554 319 169 69 54 chr18 35033588 35033718 -50955216 - Charlie7 DNA MER1_type -62 2550 2419 1121 165 0 11 chr18 35033725 35033907 -50955027 - FRAM SINE Alu -1 175 1 832 223 103 17 chr18 35033909 35034209 -50954725 - Charlie7 DNA MER1_type -202 2410 2085 1107 228 89 24 chr18 35034239 35034621 -50954313 - Charlie7 DNA MER1_type -2205 407 1 22 35 0 0 chr18 35035462 35035491 -50953443 + AT_rich Low_complexity Low_complexity 1 29 0 33 0 0 0 chr18 35036165 35036198 -50952736 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr18 35036320 35036343 -50952591 + AT_rich Low_complexity Low_complexity 1 23 0 827 246 125 20 chr18 35037315 35037612 -50951322 + MLT1I LTR MaLR 82 409 0 3964 168 27 12 chr18 35037926 35039234 -50949700 + L1MA4A LINE L1 4789 6112 -191 368 216 31 0 chr18 35039246 35039343 -50949591 + L1MA4A LINE L1 6181 6280 -23 22 0 0 0 chr18 35039361 35039383 -50949551 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr18 35039676 35039704 -50949230 + AT_rich Low_complexity Low_complexity 1 28 0 812 259 50 18 chr18 35040100 35040320 -50948614 - MIR SINE MIR -5 257 31 454 233 247 7 chr18 35040340 35040486 -50948448 + MER5A DNA MER1_type 9 189 0 186 43 0 0 chr18 35041329 35041352 -50947582 + (CGG)n Simple_repeat Simple_repeat 3 25 0 713 238 17 39 chr18 35043195 35043376 -50945558 + MER5B DNA MER1_type 1 177 -1 2264 85 41 0 chr18 35044406 35044701 -50944233 - AluSx SINE Alu 0 312 6 200 176 0 0 chr18 35044725 35044759 -50944175 + MIR SINE MIR 213 246 -16 1702 131 0 26 chr18 35045507 35045774 -50943160 + AluSx SINE Alu 36 295 -17 2460 63 3 16 chr18 35046249 35046564 -50942370 - AluY SINE Alu 0 311 1 955 198 85 8 chr18 35047193 35047440 -50941494 + MER58B DNA MER1_type 39 304 -37 189 0 0 0 chr18 35047527 35047548 -50941386 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 2068 156 0 0 chr18 35048016 35048311 -50940623 - AluSx SINE Alu -17 295 1 342 109 95 15 chr18 35049118 35049255 -50939679 + (TA)n Simple_repeat Simple_repeat 2 149 0 280 144 16 53 chr18 35049256 35049443 -50939491 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 * 386 85 91 6 chr18 35049412 35049577 -50939357 + (TA)n Simple_repeat Simple_repeat 1 179 0 * 595 78 28 50 chr18 35049572 35049751 -50939183 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 466 41 88 35 chr18 35049764 35049934 -50939000 + (TA)n Simple_repeat Simple_repeat 2 180 0 233 109 31 47 chr18 35049935 35049999 -50938935 + (TATAA)n Simple_repeat Simple_repeat 5 67 0 368 64 102 19 chr18 35049999 35050156 -50938778 + (TA)n Simple_repeat Simple_repeat 2 171 0 294 120 20 0 chr18 35051153 35051203 -50937731 - MER53 DNA DNA 0 189 139 382 286 170 0 chr18 35051683 35051830 -50937104 + MER5A DNA MER1_type 18 189 0 2115 125 0 0 chr18 35052036 35052324 -50936610 - AluJb SINE Alu -24 288 1 262 265 43 111 chr18 35052747 35052864 -50936070 + MIR SINE MIR 38 146 -116 1427 196 11 29 chr18 35053815 35054096 -50934838 + AluJo SINE Alu 7 282 -30 469 268 0 43 chr18 35054108 35054246 -50934688 + MER5A DNA MER1_type 7 138 -51 214 277 0 0 chr18 35054398 35054445 -50934489 + L2 LINE L2 3229 3275 -38 759 195 0 0 chr18 35055120 35055248 -50933686 + FLAM_C SINE Alu 1 128 -5 1526 123 3 118 chr18 35055393 35055725 -50933209 - L1PA16 LINE L1 -1 6165 5872 183 352 114 0 chr18 35056428 35056516 -50932418 + MIR SINE MIR 45 142 -66 249 281 156 0 chr18 35056792 35056927 -50932007 + MIR3 SINE MIR 30 185 -23 1235 211 54 39 chr18 35057505 35057784 -50931150 - AluJo SINE Alu -29 283 1 308 253 51 0 chr18 35058285 35058364 -50930570 - MIR3 SINE MIR -8 200 118 213 39 0 0 chr18 35058369 35058395 -50930539 + (T)n Simple_repeat Simple_repeat 1 26 0 271 234 130 53 chr18 35059172 35059303 -50929631 - MIR SINE MIR -66 142 4 402 214 238 32 chr18 35060259 35060385 -50928549 + MER5A DNA MER1_type 9 160 -29 1645 104 0 40 chr18 35060586 35060836 -50928098 - MER1B DNA MER1_type 0 339 100 270 283 98 22 chr18 35060838 35060930 -50928004 + L2 LINE L2 3145 3243 -29 334 256 24 0 chr18 35060985 35061067 -50927867 + MIR SINE MIR 117 200 -62 436 327 40 13 chr18 35061246 35061397 -50927537 + MIR SINE MIR 3 153 -55 361 214 34 0 chr18 35061590 35061679 -50927255 + MER106B DNA MER1_type 51 142 -917 2270 99 0 0 chr18 35061915 35062209 -50926725 + AluSq SINE Alu 1 294 -19 2556 64 0 3 chr18 35062696 35063008 -50925926 - AluY SINE Alu 0 311 1 993 125 0 0 chr18 35063008 35063144 -50925790 - AluSq/x SINE Alu -176 136 1 252 0 0 0 chr18 35063154 35063182 -50925752 + (T)n Simple_repeat Simple_repeat 1 28 0 616 247 0 32 chr18 35065337 35065495 -50923439 + FAM SINE Alu 15 167 -18 2092 113 3 10 chr18 35065611 35065912 -50923022 + AluSx SINE Alu 1 299 -13 4561 179 57 12 chr18 35066257 35067465 -50921469 - L1MD1 LINE L1 -18 6224 4966 451 244 8 8 chr18 35067465 35067584 -50921350 + L1MDa LINE L1 350 468 -6072 386 260 279 0 chr18 35067754 35067908 -50921026 + MIR SINE MIR 66 262 0 24 0 0 0 chr18 35068578 35068602 -50920332 + AT_rich Low_complexity Low_complexity 1 24 0 2454 65 0 3 chr18 35069017 35069324 -50919610 + AluY SINE Alu 1 306 -5 1718 166 0 0 chr18 35071094 35071359 -50917575 + AluSx SINE Alu 33 297 -15 429 221 30 30 chr18 35071579 35071710 -50917224 - MER94 DNA DNA -3 131 1 767 240 40 5 chr18 35071805 35072005 -50916929 - MER58A DNA MER1_type -8 216 10 413 200 36 27 chr18 35072150 35072260 -50916674 - MER8 DNA MER2_type 0 239 129 * 428 240 73 40 chr18 35072259 35072409 -50916525 - MER8 DNA MER2_type -62 177 23 227 284 15 30 chr18 35073265 35073332 -50915602 - L2 LINE L2 -1 3271 3206 192 152 0 0 chr18 35073332 35073365 -50915569 + (TG)n Simple_repeat Simple_repeat 2 34 0 212 320 186 48 chr18 35073397 35073628 -50915306 - L2 LINE L2 -17 3255 2993 384 271 0 0 chr18 35073656 35073741 -50915193 - L2 LINE L2 -4 3268 3184 417 275 94 13 chr18 35074168 35074317 -50914617 - MIR3 SINE MIR -25 183 23 33 25 0 0 chr18 35074450 35074490 -50914444 + AT_rich Low_complexity Low_complexity 1 40 0 1364 169 4 75 chr18 35074496 35074763 -50914171 + AluJo SINE Alu 11 258 -54 229 260 156 21 chr18 35074768 35074864 -50914070 + MIR SINE MIR 92 200 -62 234 164 55 27 chr18 35075247 35075320 -50913614 + L1MC4 LINE L1 7925 7999 -43 468 318 66 90 chr18 35075392 35076127 -50912807 - L2 LINE L2 -22 3250 2511 243 300 30 70 chr18 35076194 35076294 -50912640 - L2 LINE L2 0 3272 3177 880 350 80 39 chr18 35076471 35076822 -50912112 - L2 LINE L2 -864 2450 2115 3047 132 10 0 chr18 35076822 35077306 -50911628 + L1MB3 LINE L1 5687 6175 -8 880 350 80 39 chr18 35077306 35077768 -50911166 - L2 LINE L2 -1199 2115 1674 3766 123 30 11 chr18 35077768 35078395 -50910539 - L1MA5A LINE L1 -3 6294 5656 880 350 80 39 chr18 35078395 35078779 -50910155 - L2 LINE L2 -1640 1674 1182 190 289 22 0 chr18 35079729 35079774 -50909160 - L2 LINE L2 -12 3260 3215 459 204 43 0 chr18 35079816 35079909 -50909025 - MIR SINE MIR -122 140 44 414 0 0 0 chr18 35080015 35080061 -50908873 + (TG)n Simple_repeat Simple_repeat 2 47 0 9945 194 26 25 chr18 35080191 35083762 -50905172 - L1PA16 LINE L1 -9 6157 2589 597 191 109 0 chr18 35083761 35083908 -50905026 - L1PA16 LINE L1 -3461 2685 2523 * 210 315 130 37 chr18 35085356 35085518 -50903416 - L2 LINE L2 -210 3062 2886 328 268 171 61 chr18 35085841 35086672 -50902262 + HAL1 LINE L1 899 1820 -687 2228 94 0 0 chr18 35087612 35087898 -50901036 + AluY SINE Alu 1 286 -25 240 35 0 0 chr18 35087898 35087927 -50901007 + (TA)n Simple_repeat Simple_repeat 2 30 0 1495 238 82 23 chr18 35091512 35092038 -50896896 + MLT1G1 LTR MaLR 1 557 -38 454 267 141 19 chr18 35092066 35092272 -50896662 - MLT1H1 LTR MaLR -2 553 323 487 296 141 5 chr18 35092403 35092616 -50896318 - MLT1H1 LTR MaLR -297 258 17 461 229 93 21 chr18 35092669 35092809 -50896125 - MIR SINE MIR -110 152 3 252 322 26 26 chr18 35092926 35093041 -50895893 - MLT1K LTR MaLR -314 274 160 21 36 0 0 chr18 35093598 35093626 -50895308 + AT_rich Low_complexity Low_complexity 1 28 0 244 240 222 47 chr18 35094853 35095024 -50893910 + MIR SINE MIR 60 260 -2 1375 232 29 108 chr18 35095102 35095671 -50893263 + L2 LINE L2 2773 3311 -2 209 33 33 0 chr18 35097169 35097199 -50891735 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 14431 20 0 0 chr18 35097435 35099906 -50889028 + L1PA3 LINE L1 3682 6155 0 239 345 39 24 chr18 35100007 35100213 -50888721 + L2 LINE L2 1908 2116 -1198 204 208 0 42 chr18 35100346 35100394 -50888540 - L2 LINE L2 0 3313 3268 192 234 160 21 chr18 35100810 35100904 -50888030 + L2 LINE L2 2747 2853 -461 185 191 0 24 chr18 35101131 35101173 -50887761 + MIR SINE MIR 163 203 -59 502 240 0 0 chr18 35101193 35101297 -50887637 - L2 LINE L2 -17 3296 3193 514 288 60 30 chr18 35101662 35101865 -50887069 - MIR SINE MIR -20 242 42 2070 118 30 0 chr18 35104310 35104607 -50884327 + AluSx SINE Alu 1 306 -6 495 180 90 0 chr18 35104829 35104929 -50884005 + MIR SINE MIR 61 169 -93 2223 109 3 0 chr18 35108603 35108906 -50880028 - AluSq SINE Alu -9 304 1 215 241 69 0 chr18 35110567 35110625 -50878309 - L2 LINE L2 0 3272 3211 1902 135 60 11 chr18 35112415 35112764 -50876170 - MSTA LTR MaLR -62 366 1 415 197 9 56 chr18 35112764 35113108 -50875826 + (TA)n Simple_repeat Simple_repeat 1 327 0 201 161 18 36 chr18 35113143 35113199 -50875735 + (TA)n Simple_repeat Simple_repeat 2 56 0 204 270 80 40 chr18 35113831 35113931 -50875003 - L2 LINE L2 -2 3270 3167 586 305 77 16 chr18 35116039 35116285 -50872649 + MIR SINE MIR 2 262 0 216 318 0 32 chr18 35116344 35116407 -50872527 + L2 LINE L2 3203 3263 -9 3225 210 56 7 chr18 35116460 35117266 -50871668 - L1ME1 LINE L1 -5 6161 5317 2342 108 0 0 chr18 35117491 35117798 -50871136 + AluSx SINE Alu 3 309 -3 1710 99 16 4 chr18 35118078 35118330 -50870604 + L1PA14 LINE L1 5904 6158 -3 1224 201 133 24 chr18 35119497 35119909 -50869025 - MLT1C LTR MaLR 0 467 11 510 17 0 0 chr18 35119915 35119974 -50868960 + (TG)n Simple_repeat Simple_repeat 2 60 0 2093 123 0 17 chr18 35120064 35120365 -50868569 + AluSg SINE Alu 1 296 -14 22 0 0 0 chr18 35120418 35120440 -50868494 + AT_rich Low_complexity Low_complexity 1 22 0 2142 132 0 0 chr18 35121399 35121703 -50867231 - AluSp SINE Alu -5 308 5 375 23 0 0 chr18 35121892 35121936 -50866998 + (TG)n Simple_repeat Simple_repeat 2 45 0 497 318 108 0 chr18 35123291 35123514 -50865420 + MIR SINE MIR 15 261 -1 278 370 22 22 chr18 35123518 35123656 -50865278 - MIR3 SINE MIR -49 159 22 786 279 82 26 chr18 35123854 35124159 -50864775 - L2 LINE L2 -3 3310 2989 190 281 35 0 chr18 35125217 35125274 -50863660 + L3b LINE CR1 1384 1442 -141 2470 59 0 13 chr18 35127498 35127804 -50861130 - AluY SINE Alu -9 302 1 1868 151 0 19 chr18 35128108 35128420 -50860514 + AluJo SINE Alu 1 306 -6 1210 41 0 0 chr18 35128528 35128675 -50860259 + L1PA3 LINE L1 6009 6155 0 235 345 39 24 chr18 35128777 35128983 -50859951 + L2 LINE L2 1908 2116 -1198 205 208 0 42 chr18 35129116 35129164 -50859770 - L2 LINE L2 0 3313 3268 185 234 160 21 chr18 35129580 35129674 -50859260 + L2 LINE L2 2747 2853 -461 187 191 0 24 chr18 35129901 35129943 -50858991 + MIR SINE MIR 163 203 -59 495 240 0 0 chr18 35129963 35130067 -50858867 - L2 LINE L2 -17 3296 3193 513 288 60 30 chr18 35130432 35130635 -50858299 - MIR SINE MIR -20 242 42 2075 111 30 7 chr18 35133080 35133378 -50855556 + AluSx SINE Alu 1 305 -7 1702 158 0 0 chr18 35135148 35135401 -50853533 + AluSx SINE Alu 33 285 -27 440 229 23 23 chr18 35135633 35135764 -50853170 - MER94 DNA DNA -3 131 1 837 249 38 5 chr18 35135859 35136068 -50852866 - MER58A DNA MER1_type -8 216 1 449 200 36 27 chr18 35136204 35136314 -50852620 - MER8 DNA MER2_type 0 239 129 * 479 240 73 40 chr18 35136313 35136463 -50852471 - MER8 DNA MER2_type -62 177 23 230 284 15 30 chr18 35137319 35137386 -50851548 - L2 LINE L2 -1 3271 3206 192 152 0 0 chr18 35137386 35137419 -50851515 + (TG)n Simple_repeat Simple_repeat 2 34 0 208 320 186 48 chr18 35137451 35137682 -50851252 - L2 LINE L2 -17 3255 2993 383 271 0 0 chr18 35137710 35137795 -50851139 - L2 LINE L2 -4 3268 3184 413 275 94 13 chr18 35138222 35138371 -50850563 - MIR3 SINE MIR -25 183 23 33 25 0 0 chr18 35138504 35138544 -50850390 + AT_rich Low_complexity Low_complexity 1 40 0 1345 169 4 75 chr18 35138550 35138817 -50850117 + AluJo SINE Alu 11 258 -54 230 260 156 21 chr18 35138822 35138918 -50850016 + MIR SINE MIR 92 200 -62 261 194 37 93 chr18 35139301 35139409 -50849525 + L1MC4 LINE L1 7925 8026 -16 1104 123 0 18 chr18 35139513 35139683 -50849251 + FRAM SINE Alu 10 176 0 704 168 18 114 chr18 35139695 35139862 -50849072 + AluSc SINE Alu 141 291 -18 2172 112 0 13 chr18 35140665 35140969 -50847965 + AluSx SINE Alu 1 300 -12 24 32 0 0 chr18 35141077 35141108 -50847826 + AT_rich Low_complexity Low_complexity 1 31 0 2378 90 7 0 chr18 35141196 35141506 -50847428 - AluSx SINE Alu 0 312 1 1706 203 64 84 chr18 35143909 35144504 -50844430 + L1MC5 LINE L1 6705 7287 -674 1271 208 89 76 chr18 35144683 35145278 -50843656 + L1MC5 LINE L1 7311 7913 -48 215 133 22 0 chr18 35145304 35145349 -50843585 + (TA)n Simple_repeat Simple_repeat 2 47 0 254 206 0 0 chr18 35145393 35145456 -50843478 + L1MC/D LINE L1 5425 5487 -846 314 341 94 57 chr18 35146391 35146816 -50842118 + L2 LINE L2 2827 3267 -5 882 210 6 0 chr18 35146888 35147055 -50841879 + FRAM SINE Alu 1 168 -8 239 272 33 54 chr18 35148722 35148814 -50840120 + MER5A DNA MER1_type 90 179 -10 180 97 0 0 chr18 35148940 35148971 -50839963 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 278 298 183 0 chr18 35151835 35151939 -50836995 - L2 LINE L2 -5 3267 3145 270 0 0 0 chr18 35152902 35152932 -50836002 + (CA)n Simple_repeat Simple_repeat 1 30 0 273 152 76 63 chr18 35154100 35154179 -50834755 - MIR SINE MIR -56 206 127 292 330 57 9 chr18 35155407 35155513 -50833421 - L2 LINE L2 -212 3060 2950 343 279 10 19 chr18 35155884 35155988 -50832946 - L2 LINE L2 0 3313 3211 22 70 0 0 chr18 35158152 35158195 -50830739 + AT_rich Low_complexity Low_complexity 1 43 0 1560 108 0 0 chr18 35159413 35159617 -50829317 + AluSg/x SINE Alu 98 301 -9 230 220 170 30 chr18 35161060 35161160 -50827774 - MIR3 SINE MIR 0 208 95 223 125 0 36 chr18 35161580 35161636 -50827298 + (TA)n Simple_repeat Simple_repeat 2 55 0 382 216 170 59 chr18 35162032 35162185 -50826749 + MIR SINE MIR 50 219 -43 822 300 117 14 chr18 35162958 35163103 -50825831 - L2 LINE L2 -1 3312 3183 1381 219 105 14 chr18 35163103 35163464 -50825470 - MSTD LTR MaLR -2 394 1 822 300 117 14 chr18 35163464 35163856 -50825078 - L2 LINE L2 -130 3183 2712 827 310 83 21 chr18 35164060 35164531 -50824403 - L2 LINE L2 -1303 2011 1512 4656 167 33 10 chr18 35164547 35165626 -50823308 + L1MB7 LINE L1 5058 6160 -24 6017 142 25 70 chr18 35165641 35165771 -50823163 + L1MA6 LINE L1 4067 4201 -2099 2297 112 0 0 chr18 35165771 35166083 -50822851 + AluSx SINE Alu 1 312 0 6017 142 25 70 chr18 35166083 35166453 -50822481 + L1MA6 LINE L1 4201 4586 -1714 1918 153 40 3 chr18 35166453 35166800 -50822134 + MER46B DNA MER2_type 1 235 -1 6017 142 25 70 chr18 35166800 35167143 -50821791 + L1MA6 LINE L1 4586 4943 -1357 2367 112 41 60 chr18 35167143 35167579 -50821355 - MSTA LTR MaLR 0 428 1 6017 142 25 70 chr18 35167579 35168252 -50820682 + L1MA6 LINE L1 4943 5436 -864 1876 142 13 3 chr18 35168252 35168555 -50820379 + AluSx SINE Alu 1 306 -6 6017 142 25 70 chr18 35168555 35169215 -50819719 + L1MA6 LINE L1 5436 6125 -175 933 86 53 7 chr18 35169419 35169570 -50819364 + L1MA6 LINE L1 6143 6300 0 284 303 114 8 chr18 35169904 35170036 -50818898 - LTR67 LTR ERVL -2 555 410 322 272 0 18 chr18 35170370 35170484 -50818450 + L1 LINE L1 4936 5047 -1099 429 20 0 0 chr18 35170681 35170731 -50818203 + (CA)n Simple_repeat Simple_repeat 2 51 0 331 224 216 0 chr18 35173261 35173386 -50815548 + MIR SINE MIR 41 192 -70 394 324 7 21 chr18 35174118 35174263 -50814671 + L3 LINE CR1 1429 1571 -6 1786 147 30 30 chr18 35174654 35174954 -50813980 + AluJo SINE Alu 1 300 -12 195 114 0 0 chr18 35175418 35175453 -50813481 + (CA)n Simple_repeat Simple_repeat 2 36 0 2673 85 16 0 chr18 35175598 35175961 -50812973 + L1P4 LINE L1 5450 5818 -343 2291 98 7 0 chr18 35176080 35176386 -50812548 + AluSq SINE Alu 1 308 -5 4571 100 28 0 chr18 35176581 35177252 -50811682 - L1MA1 LINE L1 0 6302 5613 35 0 0 0 chr18 35178474 35178509 -50810425 + AT_rich Low_complexity Low_complexity 1 35 0 859 285 172 39 chr18 35178580 35179272 -50809662 - L2 LINE L2 -746 2568 1785 186 306 93 104 chr18 35179283 35179939 -50808995 - L2 LINE L2 -1138 2176 1528 21 0 0 0 chr18 35180555 35180576 -50808358 + AT_rich Low_complexity Low_complexity 1 21 0 1600 229 68 83 chr18 35182932 35183320 -50805614 - L1MEc LINE L1 -3402 2813 2421 6879 73 26 8 chr18 35183320 35184904 -50804030 - L1PA8A LINE L1 0 6131 4530 1600 229 68 83 chr18 35184904 35185510 -50803424 - L1MEc LINE L1 -3794 2421 1865 868 190 136 27 chr18 35185524 35185782 -50803152 + MER33 DNA MER1_type 31 316 -8 1817 267 85 47 chr18 35185785 35186876 -50802058 - L1MEc LINE L1 -4519 1877 745 1947 104 59 17 chr18 35187508 35187795 -50801139 - AluSp SINE Alu -13 300 2 2372 137 31 17 chr18 35188110 35188468 -50800466 - MLT1A1 LTR MaLR -2 363 1 1865 157 4 0 chr18 35188949 35189229 -50799705 + AluJo SINE Alu 14 294 -18 856 259 82 8 chr18 35189248 35189491 -50799443 - MIR SINE MIR 0 262 2 3740 92 2 8 chr18 35190700 35191192 -50797742 - L1PB2 LINE L1 -3 6148 5660 337 392 73 18 chr18 35191313 35191586 -50797348 - L2 LINE L2 -44 3228 2941 2071 230 86 43 chr18 35191680 35192236 -50796698 - MLT1E LTR MaLR -13 580 1 319 372 97 14 chr18 35192292 35192499 -50796435 - L2 LINE L2 -633 2681 2458 695 234 176 37 chr18 35193902 35194293 -50794641 + L2 LINE L2 2611 3048 -265 615 261 21 86 chr18 35194622 35194913 -50794021 + L2 LINE L2 3042 3313 0 551 279 131 9 chr18 35195269 35195491 -50793443 - MIR SINE MIR -6 256 8 402 277 39 0 chr18 35197158 35197288 -50791646 + L1MC4 LINE L1 7688 7822 -220 268 310 220 37 chr18 35199121 35199389 -50789545 - L2 LINE L2 -15 3257 2941 2638 110 13 8 chr18 35199399 35199772 -50789162 - THE1C LTR MaLR 0 375 1 211 205 0 0 chr18 35199917 35199956 -50788978 + L2 LINE L2 3262 3300 -13 22 0 0 0 chr18 35200432 35200454 -50788480 + AT_rich Low_complexity Low_complexity 1 22 0 209 273 0 0 chr18 35200785 35200829 -50788105 - L2 LINE L2 -41 3231 3188 1501 243 115 62 chr18 35201170 35201829 -50787105 - L1MC4 LINE L1 -649 7393 6700 215 378 18 0 chr18 35202849 35202960 -50785974 - L2 LINE L2 -1 3312 3200 294 256 0 26 chr18 35203722 35203800 -50785134 - MER2 DNA MER2_type -1 344 269 1107 149 5 52 chr18 35203844 35204038 -50784896 - MER2 DNA MER2_type -160 185 1 2095 169 34 6 chr18 35206662 35207017 -50781917 - MLT1A1 LTR MaLR 0 365 1 550 232 79 53 chr18 35209421 35209611 -50779323 - MIR SINE MIR -47 215 21 472 275 180 20 chr18 35209656 35209856 -50779078 - MIR SINE MIR 0 262 31 201 347 54 88 chr18 35211670 35211909 -50777025 - L2 LINE L2 -47 3225 2995 481 200 23 192 chr18 35213896 35214156 -50774778 - MIR SINE MIR 0 262 47 201 74 0 0 chr18 35218395 35218422 -50770512 + (A)n Simple_repeat Simple_repeat 1 27 0 28865 122 21 24 chr18 35221191 35222037 -50766897 - L1PA8 LINE L1 -1 6486 5639 2143 103 0 0 chr18 35222037 35222319 -50766615 - AluSq SINE Alu -7 306 25 28865 122 21 24 chr18 35222319 35222331 -50766603 - L1PA8 LINE L1 -848 5639 5628 216 0 0 0 chr18 35222331 35222355 -50766579 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 28865 122 21 24 chr18 35222355 35227953 -50760981 - L1PA8 LINE L1 -859 5628 21 2350 92 0 0 chr18 35228763 35229058 -50759876 + AluSq SINE Alu 3 297 -16 1397 104 212 8 chr18 35229766 35230007 -50758927 - AluSg SINE Alu -10 290 1 35 54 0 0 chr18 35230361 35230417 -50758517 + AT_rich Low_complexity Low_complexity 1 56 0 239 241 0 0 chr18 35230423 35230477 -50758457 + Tigger5 DNA MER2_type 1 54 -2269 359 188 24 12 chr18 35230489 35230574 -50758360 + Tigger5 DNA MER2_type 2238 2323 0 861 158 0 0 chr18 35230574 35230720 -50758214 - MER2 DNA MER2_type -159 186 41 617 307 90 0 chr18 35231616 35231828 -50757106 + MIR SINE MIR 20 250 -12 2048 105 17 27 chr18 35231830 35232125 -50756809 + AluSx SINE Alu 1 292 -20 2149 123 0 3 chr18 35232125 35232426 -50756508 + AluSg SINE Alu 1 300 -10 529 132 28 9 chr18 35232426 35232532 -50756402 + GA-rich Low_complexity Low_complexity 2 109 0 2053 144 0 3 chr18 35232988 35233293 -50755641 + AluJo SINE Alu 1 304 -8 521 188 162 39 chr18 35233542 35233771 -50755163 + MLT1F LTR MaLR 286 542 0 301 299 73 29 chr18 35233844 35233981 -50754953 + MIR3 SINE MIR 58 200 -8 181 219 24 0 chr18 35234129 35234170 -50754764 + L2 LINE L2 3267 3308 -5 190 200 0 0 chr18 35235415 35235445 -50753489 + L2 LINE L2 3266 3295 -18 1243 181 139 4 chr18 35235461 35235586 -50753348 + AluJo SINE Alu 2 109 -203 189 0 0 0 chr18 35235586 35235607 -50753327 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1243 181 139 4 chr18 35235607 35235740 -50753194 + AluJo SINE Alu 109 295 -17 186 43 0 0 chr18 35235808 35235831 -50753103 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 702 179 17 8 chr18 35235834 35235951 -50752983 - FLAM_C SINE Alu -25 118 1 333 280 32 11 chr18 35236006 35236099 -50752835 + L2 LINE L2 3177 3271 -1 320 241 12 0 chr18 35236102 35236185 -50752749 + MIR SINE MIR 151 234 -28 210 339 105 24 chr18 35236669 35236793 -50752141 + L2 LINE L2 3107 3240 -32 976 230 5 5 chr18 35237242 35237455 -50751479 + Charlie1b DNA MER1_type 8 220 -303 794 212 0 0 chr18 35238073 35238219 -50750715 + FRAM SINE Alu 1 145 -31 25 0 0 0 chr18 35239949 35239974 -50748960 + AT_rich Low_complexity Low_complexity 1 25 0 1142 158 5 68 chr18 35240226 35240448 -50748486 + AluJo SINE Alu 88 295 -17 2073 118 0 40 chr18 35240869 35241173 -50747761 + AluSx SINE Alu 1 292 -20 203 262 0 0 chr18 35241529 35241571 -50747363 - MIR SINE MIR -173 89 48 281 44 0 22 chr18 35242140 35242185 -50746749 + L1PA7 LINE L1 6108 6151 -3 32 26 0 0 chr18 35242186 35242225 -50746709 + AT_rich Low_complexity Low_complexity 1 39 0 259 299 5 102 chr18 35242291 35242478 -50746456 - L3 LINE CR1 -21 1556 1388 324 0 0 0 chr18 35244114 35244150 -50744784 + (TA)n Simple_repeat Simple_repeat 1 36 0 * 432 37 0 0 chr18 35244149 35244203 -50744731 + (GA)n Simple_repeat Simple_repeat 2 55 0 2061 105 42 3 chr18 35244395 35244681 -50744253 - AluSx SINE Alu -15 297 1 1837 178 124 23 chr18 35244808 35245251 -50743683 + L2 LINE L2 2030 2517 -797 346 102 34 17 chr18 35245284 35245343 -50743591 + MLT1C LTR MaLR 408 467 0 4593 87 19 3 chr18 35245567 35246209 -50742725 + L1PA14 LINE L1 5508 6159 -2 295 286 291 17 chr18 35246947 35247122 -50741812 - MIR SINE MIR -8 254 32 431 314 6 40 chr18 35247162 35247337 -50741597 - MIR SINE MIR -41 221 53 320 299 66 30 chr18 35247397 35247564 -50741370 - MIR3 SINE MIR -52 156 13 366 270 65 76 chr18 35248191 35248376 -50740558 - MIR SINE MIR -40 222 40 1770 158 0 34 chr18 35248417 35248729 -50740205 - AluJo SINE Alu 0 302 1 970 189 37 59 chr18 35249106 35249429 -50739505 + MER46C DNA MER2_type 2 317 -21 838 158 61 6 chr18 35249539 35249703 -50739231 + MLT1B LTR MaLR 1 173 -217 281 161 32 0 chr18 35249720 35249782 -50739152 + CT-rich Low_complexity Low_complexity 2 65 0 986 182 0 73 chr18 35249838 35250058 -50738876 + MLT1B LTR MaLR 187 390 0 22 0 0 0 chr18 35250058 35250080 -50738854 + AT_rich Low_complexity Low_complexity 1 22 0 231 216 78 0 chr18 35250254 35250305 -50738629 - L2 LINE L2 -8 3305 3251 * 835 209 71 11 chr18 35250274 35250456 -50738478 - MIR SINE MIR -26 236 44 289 267 7 59 chr18 35250450 35250585 -50738349 - L2 LINE L2 -70 3243 3116 * 2275 117 3 0 chr18 35250623 35250922 -50738012 + AluSq SINE Alu 1 300 -13 930 205 0 50 chr18 35251087 35251326 -50737608 + L1ME1 LINE L1 51 277 -6119 1687 233 5 67 chr18 35251327 35251942 -50736992 + L1ME1 LINE L1 3037 3613 -2602 746 169 32 0 chr18 35251962 35252086 -50736848 + AluJb SINE Alu 164 291 -21 2959 219 43 38 chr18 35252091 35253237 -50735697 + L1ME1 LINE L1 5068 6228 -7 291 220 0 0 chr18 35253605 35253655 -50735279 - MLT1G3 LTR MaLR -87 508 459 644 192 158 20 chr18 35253666 35253869 -50735065 - MLT1G3 LTR MaLR -196 334 104 268 332 47 99 chr18 35254353 35254564 -50734370 + L2 LINE L2 3048 3247 -25 183 31 0 94 chr18 35255475 35255507 -50733427 + L2 LINE L2 3284 3312 -1 662 217 39 48 chr18 35255568 35255775 -50733159 + L2 LINE L2 3106 3310 -3 233 316 151 7 chr18 35256373 35256512 -50732422 - MIR SINE MIR -6 256 98 203 362 0 9 chr18 35257290 35257395 -50731539 + GA-rich Low_complexity Low_complexity 1 104 0 2356 50 30 3 chr18 35258066 35258364 -50730570 - AluY SINE Alu -5 306 1 395 271 67 35 chr18 35258739 35258925 -50730009 + MIR SINE MIR 15 202 -60 360 302 142 35 chr18 35259029 35259198 -50729736 + MIR3 SINE MIR 16 202 -6 201 156 0 0 chr18 35259551 35259583 -50729351 + (TG)n Simple_repeat Simple_repeat 1 32 0 28 0 0 0 chr18 35259834 35259862 -50729072 + AT_rich Low_complexity Low_complexity 1 28 0 995 183 10 25 chr18 35260680 35260882 -50728052 + L1PB4 LINE L1 5951 6149 -7 21 0 0 0 chr18 35260882 35260903 -50728031 + AT_rich Low_complexity Low_complexity 1 21 0 668 301 56 0 chr18 35262312 35262508 -50726426 - MIR SINE MIR -8 254 48 737 258 146 43 chr18 35262537 35262983 -50725951 + LTR33 LTR ERVL 28 519 -2 185 279 0 0 chr18 35262984 35263027 -50725907 - MIR SINE MIR -217 45 3 21 57 0 0 chr18 35263229 35263264 -50725670 + AT_rich Low_complexity Low_complexity 1 35 0 637 165 1 28 chr18 35263418 35263561 -50725373 - MLT1B LTR MaLR -192 182 57 623 279 139 16 chr18 35263589 35263905 -50725029 - L1MC/D LINE L1 -2058 5750 5396 1216 212 0 5 chr18 35265211 35265433 -50723501 - MER58A DNA MER1_type -3 221 1 866 198 104 16 chr18 35265490 35265682 -50723252 - MIR SINE MIR -26 236 28 800 177 14 0 chr18 35266092 35266239 -50722695 + MLT1A1 LTR MaLR 171 319 -46 226 100 100 0 chr18 35267103 35267143 -50721791 - L2 LINE L2 -15 3257 3214 639 188 14 51 chr18 35267185 35267323 -50721611 + FLAM_C SINE Alu 1 133 0 576 146 7 126 chr18 35267355 35267506 -50721428 - FLAM_A SINE Alu 0 133 1 326 224 199 64 chr18 35268321 35268477 -50720457 - MIR SINE MIR -70 192 16 640 300 83 4 chr18 35269181 35269421 -50719513 + MIR SINE MIR 3 261 -1 198 228 81 73 chr18 35269884 35270020 -50718914 - MIR SINE MIR -28 234 98 540 200 77 39 chr18 35270055 35270142 -50718792 + MER2 DNA MER2_type 1 96 -249 2098 130 10 0 chr18 35270142 35270443 -50718491 - AluSq SINE Alu -9 304 1 540 200 77 39 chr18 35270443 35270485 -50718449 + MER2 DNA MER2_type 96 135 -210 198 0 0 0 chr18 35270487 35270509 -50718425 + (TAAAA)n Simple_repeat Simple_repeat 1 22 0 1119 229 106 18 chr18 35270525 35270920 -50718014 - MER65C LTR ERV1 -43 488 1 564 188 161 5 chr18 35270920 35271106 -50717828 + MER2 DNA MER2_type 131 345 0 1736 22 124 4 chr18 35271207 35271433 -50717501 - AluY SINE Alu -12 299 47 1731 181 10 3 chr18 35271629 35271928 -50717006 + AluJo SINE Alu 1 301 -11 530 287 55 16 chr18 35273324 35273578 -50715356 - L1MC4a LINE L1 -1916 5892 5629 355 314 92 29 chr18 35273623 35273830 -50715104 - L1ME4a LINE L1 -208 5913 5694 295 253 282 42 chr18 35273930 35274171 -50714763 + MER115 DNA AcHobo 151 449 -244 2195 129 0 0 chr18 35274517 35274819 -50714115 + AluSx SINE Alu 1 302 -10 2117 151 0 0 chr18 35276325 35276637 -50712297 + AluJb SINE Alu 1 312 0 189 0 0 0 chr18 35277948 35277969 -50710965 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 222 125 89 0 chr18 35277997 35278053 -50710881 + (TATAA)n Simple_repeat Simple_repeat 4 64 0 368 222 42 7 chr18 35278075 35278219 -50710715 + (TA)n Simple_repeat Simple_repeat 1 149 0 6087 213 62 40 chr18 35279140 35281095 -50707839 + L1MDb LINE L1 44 2091 -4449 * 43883 32 21 1 chr18 35281092 35287122 -50701812 + L1PA2 LINE L1 1 6154 -1 1454 199 46 38 chr18 35287123 35287363 -50701571 + L1MDb LINE L1 2075 2312 -4228 180 111 0 0 chr18 35287363 35287390 -50701544 + (TA)n Simple_repeat Simple_repeat 2 28 0 1454 199 46 38 chr18 35287390 35287480 -50701454 + L1MDb LINE L1 2312 2411 -4129 2209 75 17 7 chr18 35287480 35287774 -50701160 - AluY SINE Alu -14 297 1 1454 199 46 38 chr18 35287774 35287835 -50701099 + L1MDb LINE L1 2411 2470 -4070 * 3570 164 33 36 chr18 35287833 35288528 -50700406 - L1MB3 LINE L1 -278 6141 5445 790 211 0 0 chr18 35288528 35288661 -50700273 - FLAM_A SINE Alu 0 133 1 3570 164 33 36 chr18 35288661 35288726 -50700208 - L1MB3 LINE L1 -974 5445 5401 1797 167 17 7 chr18 35288726 35289020 -50699914 - AluJo SINE Alu -15 297 1 3570 164 33 36 chr18 35289020 35289087 -50699847 - L1MB3 LINE L1 -1018 5401 5335 * 7794 141 79 50 chr18 35289054 35289365 -50699569 - L1MB3 LINE L1 -4783 1601 1301 2269 120 3 0 chr18 35289365 35289674 -50699260 - AluSx SINE Alu -2 310 1 7794 141 79 50 chr18 35289674 35290898 -50698036 - L1MB3 LINE L1 -5083 1301 21 381 222 33 0 chr18 35291038 35291128 -50697806 + L1MD1 LINE L1 6136 6228 -14 393 288 144 0 chr18 35291151 35291297 -50697637 + MIR SINE MIR 41 207 -55 2428 99 120 3 chr18 35291340 35291722 -50697212 + LTR7 LTR ERV1 22 448 -2 15437 102 11 19 chr18 35291725 35294497 -50694437 + HERVH LTR ERV1 1 2995 -4718 5957 98 2 8 chr18 35294476 35295335 -50693599 + HERVH LTR ERV1 3140 3993 -3720 * 1278 111 16 0 chr18 35295337 35295527 -50693407 + HERVH LTR ERV1 4488 4680 -3033 * 13558 90 25 6 chr18 35295516 35297422 -50691512 + HERVH LTR ERV1 5772 7713 0 2747 84 119 7 chr18 35297422 35297825 -50691109 + LTR7 LTR ERV1 1 448 -2 1300 142 5 32 chr18 35297827 35298045 -50690889 - L1M4c LINE L1 -6153 231 20 370 222 33 0 chr18 35298184 35298274 -50690660 + L1MD1 LINE L1 6136 6228 -14 308 284 184 0 chr18 35298294 35298435 -50690499 + MIR SINE MIR 41 207 -55 4643 189 14 3 chr18 35298442 35299329 -50689605 - L1P LINE L1 -991 5155 4260 4924 99 14 16 chr18 35299329 35300008 -50688926 + L1PA13 LINE L1 5464 6160 -3 395 317 51 31 chr18 35300445 35300899 -50688035 + L1MC4a LINE L1 4777 5239 -907 1024 246 42 48 chr18 35300926 35301304 -50687630 + L1MC4a LINE L1 5683 6058 -1750 1627 182 25 0 chr18 35301612 35301892 -50687042 + AluJo SINE Alu 1 287 -25 266 71 0 24 chr18 35302203 35302245 -50686689 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 4265 105 76 3 chr18 35302383 35302972 -50685962 - MER51A LTR ERV1 0 634 3 1820 154 0 0 chr18 35302974 35303247 -50685687 + AluSx SINE Alu 31 303 -9 2309 102 0 0 chr18 35303592 35303887 -50685047 + AluSg SINE Alu 1 295 -15 2809 112 3 3 chr18 35303966 35304341 -50684593 + THE1C LTR MaLR 1 375 0 318 191 36 48 chr18 35304494 35304509 -50684425 + L2 LINE L2 3223 3237 -76 2754 110 7 71 chr18 35304509 35304891 -50684043 + Tigger2a DNA MER2_type 1 406 -2302 1469 160 10 67 chr18 35304891 35305204 -50683730 + AluJo SINE Alu 5 299 -13 1925 154 3 3 chr18 35305212 35305510 -50683424 - AluJo SINE Alu -14 298 1 2754 110 7 71 chr18 35305510 35305582 -50683352 + Tigger2a DNA MER2_type 413 434 0 318 191 36 48 chr18 35305582 35305650 -50683284 + L2 LINE L2 3237 3305 -8 2356 93 3 3 chr18 35305915 35306227 -50682707 - AluSq SINE Alu -1 312 1 32 0 0 0 chr18 35306307 35306339 -50682595 + AT_rich Low_complexity Low_complexity 1 32 0 1335 166 7 84 chr18 35307937 35308068 -50680866 + AluJb SINE Alu 6 146 -166 342 0 0 0 chr18 35308068 35308106 -50680828 + (CA)n Simple_repeat Simple_repeat 2 39 0 1335 166 7 84 chr18 35308106 35308282 -50680652 + AluJb SINE Alu 146 289 -23 22 0 0 30 chr18 35308400 35308416 -50680518 + AT_rich Low_complexity Low_complexity 1 16 -16 2265 66 0 7 chr18 35308416 35308703 -50680231 + AluY SINE Alu 1 285 -26 22 0 0 30 chr18 35308703 35308719 -50680215 + AT_rich Low_complexity Low_complexity 16 32 0 28 71 0 0 chr18 35309190 35309246 -50679688 + AT_rich Low_complexity Low_complexity 1 56 0 1021 179 9 42 chr18 35310310 35310522 -50678412 + AluJo SINE Alu 1 205 -107 227 286 71 0 chr18 35310821 35310891 -50678043 - MER5A DNA MER1_type -28 161 87 921 221 67 0 chr18 35311075 35311283 -50677651 - MIR SINE MIR -40 222 1 24 32 0 0 chr18 35311536 35311567 -50677367 + AT_rich Low_complexity Low_complexity 1 31 0 314 260 20 10 chr18 35312535 35312635 -50676299 + MER74B LTR ERVL 522 622 0 277 233 82 41 chr18 35312777 35312850 -50676084 - L2 LINE L2 -47 3266 3191 927 156 0 0 chr18 35312972 35313100 -50675834 + FLAM_C SINE Alu 1 128 -5 1198 283 92 53 chr18 35313839 35314425 -50674509 + MLT1L LTR MaLR 5 613 -2 683 236 169 39 chr18 35314581 35314966 -50673968 + MLT1F LTR MaLR 106 540 -2 2167 43 16 0 chr18 35315768 35316026 -50672908 - AluY SINE Alu -8 303 42 180 0 0 0 chr18 35316673 35316693 -50672241 + (TTAG)n Simple_repeat Simple_repeat 4 23 0 821 244 122 17 chr18 35317184 35317537 -50671397 + MER113 DNA MER1_type? 131 520 -1 558 334 130 52 chr18 35318952 35320428 -50668506 - L2 LINE L2 -165 3107 1527 445 296 281 4 chr18 35322153 35322423 -50666511 - L2 LINE L2 -4 3268 2924 2369 82 16 0 chr18 35322979 35323282 -50665652 - AluSp SINE Alu -5 308 1 1757 172 13 3 chr18 35323871 35324173 -50664761 + AluJo SINE Alu 1 305 -7 203 349 30 0 chr18 35324260 35324326 -50664608 - MIR SINE MIR -166 96 29 250 269 123 23 chr18 35324397 35324653 -50664281 + L1ME4a LINE L1 5366 5679 -442 2413 94 3 7 chr18 35324682 35324991 -50663943 + AluSx SINE Alu 1 308 -4 378 202 162 7 chr18 35325005 35325236 -50663698 + L1ME4a LINE L1 5834 6113 -8 333 232 42 11 chr18 35326509 35326604 -50662330 + L1ME4a LINE L1 5964 6061 -60 1713 123 103 56 chr18 35326822 35327180 -50661754 + THE1C LTR MaLR 1 375 0 337 306 146 86 chr18 35327890 35328158 -50660776 + L2 LINE L2 2969 3252 -20 21 36 0 0 chr18 35330322 35330350 -50658584 + AT_rich Low_complexity Low_complexity 1 28 0 284 271 139 16 chr18 35330721 35330843 -50658091 - MIR SINE MIR -120 142 6 21 0 0 0 chr18 35331506 35331527 -50657407 + AT_rich Low_complexity Low_complexity 1 21 0 1838 135 49 10 chr18 35331588 35331876 -50657058 + AluSx SINE Alu 1 299 -13 192 40 0 0 chr18 35332068 35332093 -50656841 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1691 171 17 24 chr18 35332095 35332388 -50656546 - AluJo SINE Alu -21 291 1 976 240 130 56 chr18 35332585 35332655 -50656279 + LTR16A1 LTR ERVL 19 82 -375 1910 159 87 6 chr18 35332655 35332989 -50655945 + MLT1A1 LTR MaLR 5 365 0 976 240 130 56 chr18 35332989 35333310 -50655624 + LTR16A1 LTR ERVL 82 439 -18 256 352 19 9 chr18 35333726 35333834 -50655100 + L3 LINE CR1 1039 1147 -430 2516 87 0 0 chr18 35333902 35334212 -50654722 + AluSg SINE Alu 1 310 0 1988 140 51 63 chr18 35334350 35334505 -50654429 - MLT1B LTR MaLR -1 389 234 1771 167 49 0 chr18 35334505 35334792 -50654142 - AluSx SINE Alu -11 301 1 1988 140 51 63 chr18 35334792 35335030 -50653904 - MLT1B LTR MaLR -156 234 1 7377 118 11 35 chr18 35335172 35337171 -50651763 - L1PA10 LINE L1 -1 6167 4187 627 194 182 17 chr18 35337716 35337919 -50651015 + LTR41 LTR ERVL 1 259 -536 768 188 79 118 chr18 35338012 35338316 -50650618 + LTR41 LTR ERVL 464 755 -18 1157 154 0 16 chr18 35338404 35338586 -50650348 + FRAM SINE Alu 1 176 0 2473 55 14 0 chr18 35340178 35340471 -50648463 + AluY SINE Alu 2 298 -13 662 284 102 0 chr18 35340603 35340818 -50648116 - MIR SINE MIR -6 256 20 187 262 167 0 chr18 35341425 35341509 -50647425 + MER5B DNA MER1_type 77 174 -4 2530 62 3 0 chr18 35341970 35342278 -50646656 - AluY SINE Alu -2 309 1 797 145 0 8 chr18 35342309 35342426 -50646508 + FLAM_C SINE Alu 1 116 -17 207 236 28 0 chr18 35343017 35343089 -50645845 + (TA)n Simple_repeat Simple_repeat 2 75 0 285 176 39 0 chr18 35344473 35344524 -50644410 + MER3 DNA MER1_type 37 89 -120 435 136 204 11 chr18 35344861 35344949 -50643985 + LTR47A LTR ERVL 339 443 -9 * 486 224 9 9 chr18 35344946 35345062 -50643872 + MER3 DNA MER1_type 94 209 0 621 213 48 9 chr18 35345438 35345606 -50643328 + L1MC3 LINE L1 7588 7978 -17 298 240 50 0 chr18 35345780 35345880 -50643054 - L1MDb LINE L1 -5136 1273 1169 950 169 0 0 chr18 35345896 35346050 -50642884 - AluSg/x SINE Alu -15 295 142 4767 119 33 71 chr18 35346050 35346905 -50642029 - LTR12 LTR ERV1 0 826 5 1949 191 67 29 chr18 35346921 35347476 -50641458 - pTR5 LTR ERV1 -1094 1344 769 1166 98 13 7 chr18 35347489 35347642 -50641292 - AluSq SINE Alu -159 154 1 2092 105 24 14 chr18 35347663 35347957 -50640977 - AluSx SINE Alu -15 297 1 3130 119 2 15 chr18 35347973 35348034 -50640900 - L1MB3 LINE L1 -9 6174 6114 1964 153 44 33 chr18 35348034 35348394 -50640540 - THE1B LTR MaLR 0 364 1 3130 119 2 15 chr18 35348394 35348812 -50640122 - L1MB3 LINE L1 -69 6114 5701 1190 181 98 4 chr18 35348826 35349092 -50639842 - L1MB3 LINE L1 -1141 5005 4715 2178 76 6 70 chr18 35349335 35349649 -50639285 - AluY SINE Alu -17 294 1 349 261 43 47 chr18 35350203 35350437 -50638497 - L1M4 LINE L1 -959 5187 4955 1840 190 104 31 chr18 35351167 35351687 -50637247 - L1M4 LINE L1 -2163 3983 3426 7440 104 7 1 chr18 35351688 35352678 -50636256 + THE1C-int LTR MaLR 585 1580 0 2831 92 19 0 chr18 35352678 35353046 -50635888 + THE1C LTR MaLR 1 375 0 693 190 0 0 chr18 35353046 35353162 -50635772 + Tigger3(Golem) DNA MER2_type 2923 3038 0 791 203 52 35 chr18 35353162 35353452 -50635482 - L1M4 LINE L1 -3017 3129 2835 3851 185 80 5 chr18 35353668 35354480 -50634454 - MLT1C-int LTR MaLR -484 887 15 1463 211 60 6 chr18 35354482 35354813 -50634121 - MLT1C LTR MaLR -31 436 88 2037 193 34 25 chr18 35354813 35355266 -50633668 - MLT1A1 LTR MaLR 0 365 1 1928 161 3 3 chr18 35355306 35355604 -50633330 + AluJb SINE Alu 1 298 -14 204 40 0 0 chr18 35355712 35355737 -50633197 + (CA)n Simple_repeat Simple_repeat 2 26 0 642 203 105 118 chr18 35357449 35357754 -50631180 + ERVL-F LTR ERVL 5456 5756 -8 1909 231 48 22 chr18 35357756 35358356 -50630578 + MLT2F LTR ERVL 3 663 0 1600 150 0 31 chr18 35358413 35358667 -50630267 + AluSx SINE Alu 1 246 -66 7509 181 50 66 chr18 35358667 35360451 -50628483 - MER52A LTR ERV1 0 1755 1 331 121 0 35 chr18 35360455 35360513 -50628421 + AluSx SINE Alu 246 301 0 2122 219 93 45 chr18 35360513 35363176 -50625758 + L1ME1 LINE L1 2429 5421 -745 1620 206 0 3 chr18 35363176 35363486 -50625448 - AluJb SINE Alu -3 309 1 2122 219 93 45 chr18 35363486 35364265 -50624669 + L1ME1 LINE L1 5421 6161 -5 2005 108 11 28 chr18 35364267 35364585 -50624349 - AluSx SINE Alu 0 313 1 231 175 0 105 chr18 35365089 35365146 -50623788 + Charlie1 DNA MER1_type 1 51 -2710 217 186 69 88 chr18 35365159 35365261 -50623673 - MER5A DNA MER1_type -68 121 22 222 329 151 7 chr18 35366837 35366983 -50621951 + MIR SINE MIR 15 181 -81 521 242 93 99 chr18 35366992 35367294 -50621640 - MLT1H1 LTR MaLR -9 546 234 243 325 12 25 chr18 35367387 35367467 -50621467 - MLT1H1 LTR MaLR -438 104 26 1806 179 0 16 chr18 35367485 35367798 -50621136 + AluJo SINE Alu 1 308 -4 588 264 44 11 chr18 35368458 35368640 -50620294 - L2 LINE L2 -18 3295 3108 998 242 78 117 chr18 35368641 35369178 -50619756 - LTR33 LTR ERVL 0 521 6 1720 317 50 33 chr18 35369407 35370215 -50618719 - ERVL LTR ERVL -420 5344 4524 1328 294 63 19 chr18 35370261 35370686 -50618248 - ERVL LTR ERVL -1335 4429 3986 758 213 28 0 chr18 35420878 35421019 -50567915 - FRAM SINE Alu -30 146 2 887 209 6 0 chr18 35421219 35421382 -50567552 + AluJb SINE Alu 137 300 -12 247 204 0 0 chr18 35421781 35421830 -50567104 + MLT1L LTR MaLR 196 244 -371 674 184 47 90 chr18 35421830 35422129 -50566805 - L1M4 LINE L1 -2724 3422 3137 2983 228 71 25 chr18 35422187 35422582 -50566352 - L1ME1 LINE L1 -81 6085 5710 2375 81 17 0 chr18 35422582 35422878 -50566056 + AluSx SINE Alu 1 301 -11 2983 228 71 25 chr18 35422878 35423766 -50565168 - L1ME1 LINE L1 -456 5710 4740 1458 155 0 13 chr18 35423780 35424012 -50564922 + AluJo SINE Alu 1 229 -83 1906 212 79 48 chr18 35424114 35424712 -50564222 + MER21B LTR ERV1 197 812 -51 232 261 250 0 chr18 35425392 35425484 -50563450 - L2 LINE L2 -2 3270 3156 258 32 0 0 chr18 35426054 35426085 -50562849 + (CA)n Simple_repeat Simple_repeat 2 32 0 1540 188 71 14 chr18 35426713 35427204 -50561730 + L1MC3 LINE L1 6530 7124 -661 434 198 75 0 chr18 35427178 35427284 -50561650 + L1MD3 LINE L1 7343 7456 -539 * 943 185 10 26 chr18 35427286 35427481 -50561453 - MER20 DNA MER1_type 0 219 28 483 200 8 25 chr18 35427509 35427629 -50561305 + L1MD3 LINE L1 7467 7584 -411 4894 208 86 18 chr18 35427635 35427907 -50561027 + L1M3 LINE L1 3287 3539 -2607 2250 58 7 65 chr18 35427907 35428216 -50560718 + AluY SINE Alu 1 291 -20 4894 208 86 18 chr18 35428216 35428849 -50560085 + L1M3 LINE L1 3539 4128 -2018 297 0 0 0 chr18 35428849 35428882 -50560052 + (CA)n Simple_repeat Simple_repeat 1 33 0 4894 208 86 18 chr18 35428882 35429325 -50559609 + L1M3 LINE L1 4128 4739 -1407 796 188 0 0 chr18 35429325 35429458 -50559476 + FLAM_A SINE Alu 1 133 0 4894 208 86 18 chr18 35429458 35429519 -50559415 + L1M3 LINE L1 4739 4794 -1352 956 195 75 49 chr18 35429525 35429964 -50558970 + LTR56 LTR ERV1 9 445 0 1744 166 54 24 chr18 35429973 35430447 -50558487 + L1M3 LINE L1 4791 5249 -931 2224 86 0 10 chr18 35430447 35430760 -50558174 + AluY SINE Alu 1 289 -22 1744 166 54 24 chr18 35430760 35431031 -50557903 + L1M3 LINE L1 5249 5728 -452 604 256 103 35 chr18 35431237 35431690 -50557244 + L1MEc LINE L1 2081 2534 -3681 269 224 90 15 chr18 35431690 35431757 -50557177 + LTR35 LTR ERV1 1 72 -546 1888 152 3 3 chr18 35431958 35432263 -50556671 - AluJb SINE Alu 0 305 1 415 260 34 75 chr18 35432408 35432554 -50556380 + LTR35 LTR ERV1 462 601 -17 461 275 73 28 chr18 35432620 35432798 -50556136 + LTR35-int LTR ERV1 452 637 -5309 8275 177 80 77 chr18 35433259 35435503 -50553431 + LTR35-int LTR ERV1 880 3116 -2882 1820 175 3 3 chr18 35435503 35435800 -50553134 + AluJb SINE Alu 1 297 -15 8275 177 80 77 chr18 35435800 35436498 -50552436 + LTR35-int LTR ERV1 3116 3810 -2188 1959 146 3 14 chr18 35436498 35436793 -50552141 + AluSx SINE Alu 1 292 -20 8275 177 80 77 chr18 35436793 35437104 -50551830 + LTR35-int LTR ERV1 3810 5790 -208 1004 137 96 60 chr18 35437124 35437373 -50551561 + LTR35-int LTR ERV1 5914 6171 -160 406 190 92 35 chr18 35437480 35437622 -50551312 + LTR35-int LTR ERV1 6526 6675 -1 230 275 87 0 chr18 35437622 35437691 -50551243 + LTR35 LTR ERV1 1 75 -543 309 243 56 102 chr18 35437889 35438218 -50550716 + LTR35 LTR ERV1 351 670 -9 267 333 0 0 chr18 35438489 35438606 -50550328 + L1MEc LINE L1 2738 2854 -3361 534 196 143 0 chr18 35438668 35438801 -50550133 + MER3 DNA MER1_type 58 209 0 552 248 139 6 chr18 35438850 35439189 -50549745 + L1MEc LINE L1 2948 3331 -2884 1279 99 6 0 chr18 35439268 35439439 -50549495 + AluSp SINE Alu 124 295 -18 406 284 42 13 chr18 35439440 35439679 -50549255 + L1MEc LINE L1 3464 3709 -2506 789 234 81 10 chr18 35440147 35440356 -50548578 + MER58A DNA MER1_type 1 224 0 202 229 0 0 chr18 35440434 35440482 -50548452 + A-rich Low_complexity Low_complexity 1 48 0 597 171 17 0 chr18 35440753 35440870 -50548064 - L1MC4 LINE L1 -5 8037 7919 217 128 43 0 chr18 35440984 35441031 -50547903 + (TA)n Simple_repeat Simple_repeat 2 50 0 297 95 0 63 chr18 35441044 35441107 -50547827 - LTR49 LTR ERV1 -78 517 459 282 152 0 0 chr18 35441122 35441168 -50547766 - L1MC4 LINE L1 -144 7898 7853 369 244 168 0 chr18 35441168 35441287 -50547647 - L2 LINE L2 -537 2777 2639 492 240 70 8 chr18 35441287 35441416 -50547518 - L2 LINE L2 -862 2452 2316 1247 244 102 27 chr18 35441962 35442372 -50546562 - L2 LINE L2 -993 2321 1881 1549 243 70 53 chr18 35442403 35442775 -50546159 - L1MCa LINE L1 -2836 3379 3015 3514 118 14 26 chr18 35442775 35443362 -50545572 - L1MC1 LINE L1 -15 6318 5739 1549 243 70 53 chr18 35443362 35444186 -50544748 - L1MCa LINE L1 -3200 3015 2114 689 192 8 15 chr18 35444186 35444316 -50544618 - FLAM_A SINE Alu -4 129 1 1549 243 70 53 chr18 35444316 35444351 -50544583 - L1MCa LINE L1 -4101 2114 2081 433 56 0 0 chr18 35444351 35444405 -50544529 - Alu SINE Alu -248 63 10 340 194 256 8 chr18 35444499 35444628 -50544306 - L1MCa LINE L1 -5652 744 584 615 172 197 0 chr18 35444684 35444806 -50544128 - MER20 DNA MER1_type -73 146 1 1621 237 86 8 chr18 35444808 35445311 -50543623 - L1MCa LINE L1 -5811 585 44 501 244 88 24 chr18 35445318 35445523 -50543411 - L2 LINE L2 -1622 1692 1475 827 259 99 48 chr18 35445804 35446362 -50542572 + L2 LINE L2 2717 3308 -5 895 250 128 32 chr18 35446998 35447374 -50541560 - MLT1K LTR MaLR -32 556 145 406 256 177 55 chr18 35447456 35447710 -50541224 + L1MC/D LINE L1 5290 5548 -573 227 279 63 9 chr18 35447733 35447844 -50541090 + L1MC/D LINE L1 5610 5726 -2082 668 269 218 5 chr18 35448156 35448573 -50540361 + L1MC/D LINE L1 5315 5820 -1988 357 148 114 11 chr18 35448618 35448706 -50540228 + MIR SINE MIR 134 230 -32 187 326 0 0 chr18 35450820 35450863 -50538071 + L2 LINE L2 3209 3251 -21 22 0 0 0 chr18 35452485 35452507 -50536427 + AT_rich Low_complexity Low_complexity 1 22 0 383 280 10 10 chr18 35455514 35455614 -50533320 + MER58 DNA MER1_type 1 100 -241 334 156 361 0 chr18 35455697 35455819 -50533115 + MER58 DNA MER1_type 106 271 -2149 3084 131 62 13 chr18 35455844 35456393 -50532541 + Tigger3b DNA MER2_type 1 576 -655 868 188 6 18 chr18 35456395 35456560 -50532374 + FRAM SINE Alu 1 163 -3 344 131 33 0 chr18 35456574 35456635 -50532299 + AluS SINE Alu 2 64 -239 1396 137 13 0 chr18 35456740 35456966 -50531968 + Tigger3b DNA MER2_type 1002 1230 -2 258 125 0 0 chr18 35456968 35457008 -50531926 + MER58 DNA MER1_type 2377 2416 -4 21 36 0 0 chr18 35458647 35458675 -50530259 + GC_rich Low_complexity Low_complexity 1 28 0 522 270 69 30 chr18 35458876 35459088 -50529846 - MIR SINE MIR -19 243 34 250 265 58 69 chr18 35459242 35459431 -50529503 + L2 LINE L2 2691 2877 -437 560 273 65 35 chr18 35459433 35459664 -50529270 + L2 LINE L2 3076 3313 0 751 150 39 0 chr18 35460209 35460336 -50528598 - AluJ SINE Alu -16 296 165 766 191 79 0 chr18 35460490 35460521 -50528413 - AluJ SINE Alu -148 164 137 207 0 0 0 chr18 35460521 35460544 -50528390 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 766 191 79 0 chr18 35460544 35460664 -50528270 - AluJ SINE Alu -175 137 1 970 200 29 15 chr18 35460883 35461088 -50527846 + REP3 LTR ERV 6 213 -349 1353 94 14 22 chr18 35461189 35461412 -50527522 + HERVH LTR ERV1 7493 7713 0 2788 80 92 5 chr18 35461412 35461824 -50527110 + LTR7 LTR ERV1 1 448 -2 385 73 15 15 chr18 35461937 35462005 -50526929 + L1MB4 LINE L1 6113 6180 0 25 0 0 0 chr18 35462231 35462256 -50526678 + AT_rich Low_complexity Low_complexity 1 25 0 257 125 0 0 chr18 35462262 35462302 -50526632 - Alu SINE Alu -11 291 252 406 277 96 102 chr18 35462367 35462699 -50526235 + L1ME LINE L1 494 823 -5573 1093 265 51 41 chr18 35462730 35463296 -50525638 + L1ME LINE L1 776 1347 -5062 * 1802 250 55 21 chr18 35463279 35463761 -50525173 + L1M4 LINE L1 3664 4173 -1973 1702 176 13 20 chr18 35463761 35464063 -50524871 + AluJo SINE Alu 1 300 -12 1802 250 55 21 chr18 35464063 35464203 -50524731 + L1M4 LINE L1 4173 4307 -1839 1916 148 43 23 chr18 35464203 35464607 -50524327 - MSTA LTR MaLR 0 432 1 8967 154 50 11 chr18 35464607 35466197 -50522737 - MSTA-int LTR MaLR 0 1651 1 2616 135 24 12 chr18 35466198 35466620 -50522314 - MSTA LTR MaLR -1 427 1 503 172 11 0 chr18 35466620 35466713 -50522221 - MLT1A2 LTR MaLR -280 94 1 307 214 38 69 chr18 35466713 35466797 -50522137 + L1M4 LINE L1 4303 4381 -1765 1863 154 3 27 chr18 35466797 35467096 -50521838 + AluSx SINE Alu 1 292 -20 307 214 38 69 chr18 35467096 35467170 -50521764 + L1M4 LINE L1 4381 4456 -1690 2455 110 93 5 chr18 35467641 35468051 -50520883 - LTR7 LTR ERV1 -2 448 3 1915 140 48 19 chr18 35468054 35468433 -50520501 - HERVH LTR ERV1 0 7713 7324 1347 125 19 0 chr18 35468433 35468649 -50520285 - HERVH LTR ERV1 -1894 5819 5600 4088 145 0 3 chr18 35468650 35469314 -50519620 - HERVH LTR ERV1 -2564 5149 4488 5545 103 3 2 chr18 35469316 35470169 -50518765 - HERVH LTR ERV1 -3720 3993 3140 * 13934 98 15 33 chr18 35470148 35472887 -50516047 - HERVH LTR ERV1 -4718 2995 1 2685 78 103 7 chr18 35472889 35473298 -50515636 - LTR7 LTR ERV1 -2 448 1 498 242 61 40 chr18 35473594 35473792 -50515142 - MLT1L LTR MaLR -242 373 172 842 146 7 28 chr18 35473794 35473938 -50514996 - FLAM_C SINE Alu -2 141 1 22 0 0 0 chr18 35474048 35474070 -50514864 + AT_rich Low_complexity Low_complexity 1 22 0 190 279 0 0 chr18 35474670 35474713 -50514221 + L2 LINE L2 3179 3221 -92 4604 155 46 1 chr18 35474754 35475675 -50513259 - L1MB4 LINE L1 0 6180 5221 354 250 40 0 chr18 35475677 35475753 -50513181 - L2 LINE L2 -9 3263 3185 22 35 0 0 chr18 35476764 35476793 -50512141 + AT_rich Low_complexity Low_complexity 1 29 0 264 367 140 12 chr18 35476888 35477229 -50511705 - L2 LINE L2 -235 3037 2652 254 316 104 54 chr18 35477323 35477639 -50511295 - L2 LINE L2 -1630 1684 1353 477 47 0 0 chr18 35479977 35480041 -50508893 + (TTTA)n Simple_repeat Simple_repeat 2 65 0 1428 136 0 5 chr18 35480070 35480276 -50508658 - AluSx SINE Alu -107 205 1 2892 0 0 3 chr18 35482028 35482338 -50506596 - AluYa5 SINE Alu -2 309 1 246 313 55 16 chr18 35482695 35482823 -50506111 + MER110 LTR ERV1 306 438 -53 2670 149 33 19 chr18 35482914 35483336 -50505598 - MSTC LTR MaLR 0 428 1 332 176 95 0 chr18 35484151 35484225 -50504709 + L2 LINE L2 3012 3092 -221 2253 115 0 0 chr18 35486018 35486322 -50502612 - AluSx SINE Alu -8 304 1 835 110 7 97 chr18 35486683 35486828 -50502106 + FLAM_C SINE Alu 2 133 0 374 317 59 48 chr18 35486895 35487166 -50501768 - L1ME LINE L1 -340 5781 5508 2248 115 0 0 chr18 35487259 35487571 -50501363 - AluSx SINE Alu 0 312 1 480 263 156 27 chr18 35487822 35488008 -50500926 - MIR SINE MIR -11 251 42 22 35 0 0 chr18 35488486 35488515 -50500419 + GC_rich Low_complexity Low_complexity 1 29 0 1699 158 7 3 chr18 35489379 35489683 -50499251 + AluJb SINE Alu 1 305 0 21 0 0 0 chr18 35490423 35490444 -50498490 + AT_rich Low_complexity Low_complexity 1 21 0 260 330 97 19 chr18 35490490 35490593 -50498341 - L2 LINE L2 -25 3247 3137 305 314 148 55 chr18 35490770 35491095 -50497839 - L2 LINE L2 -435 2879 2525 1899 165 0 7 chr18 35491628 35491919 -50497015 + AluJb SINE Alu 7 295 -17 1378 126 109 4 chr18 35491930 35492169 -50496765 + L1PA15 LINE L1 5902 6165 0 4013 130 32 3 chr18 35492298 35492915 -50496019 - LTR24C LTR ERV1 0 635 1 2520 97 22 40 chr18 35493018 35493389 -50495545 - THE1B LTR MaLR 0 364 1 292 246 212 10 chr18 35493549 35493702 -50495232 + MIR SINE MIR 30 208 -54 208 103 0 0 chr18 35493696 35493725 -50495209 + MER5B DNA MER1_type 130 158 -20 * 1806 203 104 56 chr18 35493727 35494209 -50494725 - MLT1D LTR MaLR 0 505 1 1106 174 20 0 chr18 35494330 35494526 -50494408 - MER3 DNA MER1_type -9 200 1 851 193 0 31 chr18 35494720 35494881 -50494053 + AluJo SINE Alu 48 203 -109 2200 103 0 20 chr18 35496342 35496644 -50492290 + AluSx SINE Alu 1 296 -16 822 184 63 128 chr18 35496921 35497339 -50491595 - MLT1B LTR MaLR -2 503 6 242 188 175 12 chr18 35497346 35497426 -50491508 + LTR41 LTR ERVL 3 95 -678 299 308 25 33 chr18 35497814 35497934 -50491000 - MIR3 SINE MIR -53 155 37 404 204 21 11 chr18 35498189 35498282 -50490652 + LTR41 LTR ERVL 93 186 -587 579 335 0 0 chr18 35498338 35498505 -50490429 + LTR41 LTR ERVL 376 542 -231 3542 289 34 26 chr18 35498512 35499901 -50489033 + ERVL LTR ERVL 4017 5425 -152 8683 107 34 6 chr18 35500284 35501540 -50487394 + HSMAR2 DNA Mariner 9 1299 -3 2601 148 19 5 chr18 35502181 35502612 -50486322 + L1MB3 LINE L1 5572 6008 -175 1079 266 20 56 chr18 35502642 35503033 -50485901 - MLT1G LTR MaLR -195 395 19 1050 99 26 0 chr18 35503254 35503405 -50485529 - AluSg/x SINE Alu -17 295 141 1533 165 77 26 chr18 35503506 35503845 -50485089 + MLT1D LTR MaLR 150 505 0 5273 184 26 16 chr18 35503845 35505721 -50483213 - L1MB7 LINE L1 -37 6147 4253 1948 110 0 4 chr18 35505725 35505988 -50482946 - AluSq SINE Alu -2 311 50 422 40 0 0 chr18 35505990 35506040 -50482894 + AluY SINE Alu 10 59 -259 1086 219 5 5 chr18 35506054 35506273 -50482661 - AluJb SINE Alu -10 302 84 1381 192 20 118 chr18 35506273 35506499 -50482435 - L1MB7 LINE L1 -1904 4242 4082 1607 181 14 3 chr18 35506499 35506787 -50482147 - AluJb SINE Alu -9 303 13 1381 192 20 118 chr18 35506787 35507019 -50481915 - L1MB7 LINE L1 -2064 4082 3829 339 318 180 9 chr18 35507041 35507274 -50481660 - L1MEd LINE L1 -5286 833 561 1220 189 114 14 chr18 35507464 35507892 -50481042 + L1MC/D LINE L1 4937 5345 -801 1023 108 7 0 chr18 35507892 35508031 -50480903 + AluSq/x SINE Alu 2 141 -172 2131 100 4 0 chr18 35508031 35508343 -50480591 + AluSx SINE Alu 1 313 0 216 333 33 39 chr18 35509574 35509727 -50479207 - L2 LINE L2 -1372 1942 1791 238 227 0 0 chr18 35510203 35510247 -50478687 + MLT1L LTR MaLR 5 48 -567 408 286 63 61 chr18 35510293 35510550 -50478384 + MLT1L LTR MaLR 106 433 -182 2255 174 59 70 chr18 35510551 35511062 -50477872 + MLT1D LTR MaLR 1 505 0 244 191 63 16 chr18 35511062 35511125 -50477809 + MLT1J LTR MaLR 88 153 -358 393 216 27 68 chr18 35511251 35511399 -50477535 + MLT1J LTR MaLR 325 466 -45 920 192 7 162 chr18 35511460 35511893 -50477041 + L1M4 LINE L1 2581 2946 -3200 1043 93 46 0 chr18 35511907 35512058 -50476876 + L1MA8 LINE L1 6128 6285 -6 24 0 0 0 chr18 35512059 35512083 -50476851 + AT_rich Low_complexity Low_complexity 1 24 0 230 266 112 29 chr18 35512117 35512262 -50476672 + L1M4 LINE L1 2933 3107 -3039 2652 48 0 0 chr18 35512262 35512573 -50476361 + AluY SINE Alu 1 311 0 230 266 112 29 chr18 35512573 35512668 -50476266 + L1M4 LINE L1 3107 3193 -2953 206 155 0 99 chr18 35512682 35512753 -50476181 + (TAATG)n Simple_repeat Simple_repeat 2 65 0 23 33 0 0 chr18 35512941 35512971 -50475963 + AT_rich Low_complexity Low_complexity 1 30 0 912 318 56 6 chr18 35513212 35513533 -50475401 - LTR16A LTR ERVL -7 443 107 242 234 0 0 chr18 35513743 35513790 -50475144 + MER94 DNA DNA 72 118 -16 1941 240 124 61 chr18 35513824 35514736 -50474198 + L1M4 LINE L1 3272 4263 -1883 2182 106 20 3 chr18 35514736 35515029 -50473905 + AluSq SINE Alu 1 298 -15 1941 240 124 61 chr18 35515029 35515186 -50473748 + L1M4 LINE L1 4263 4409 -1737 7896 36 0 0 chr18 35515226 35516173 -50472761 - L1PA5 LINE L1 -1 6153 5203 5064 157 35 31 chr18 35516235 35517734 -50471200 + L1MB2 LINE L1 4670 6171 0 1282 254 38 86 chr18 35517785 35518090 -50470844 + L1M4 LINE L1 4462 4780 -1366 1732 165 36 16 chr18 35518090 35518393 -50470541 + AluJo SINE Alu 1 309 -3 1282 254 38 86 chr18 35518393 35518844 -50470090 + L1M4 LINE L1 4780 5182 -964 601 236 60 66 chr18 35518853 35519188 -50469746 + HAL1 LINE L1 1818 2150 -357 476 302 0 0 chr18 35519564 35519693 -50469241 + MIR SINE MIR 67 195 -67 38 81 0 0 chr18 35519713 35519800 -50469134 + AT_rich Low_complexity Low_complexity 1 87 0 273 286 31 10 chr18 35520305 35520403 -50468531 + LTR33A LTR ERVL 421 520 -3 207 0 0 0 chr18 35522500 35522523 -50466411 + (TC)n Simple_repeat Simple_repeat 1 23 0 * 360 0 0 0 chr18 35522522 35522562 -50466372 + (CA)n Simple_repeat Simple_repeat 1 40 0 188 307 125 0 chr18 35523072 35523160 -50465774 - L2 LINE L2 -223 3049 2951 464 0 18 0 chr18 35524251 35524307 -50464627 + (GA)n Simple_repeat Simple_repeat 2 58 0 202 197 70 0 chr18 35524766 35524837 -50464097 + (TTAAA)n Simple_repeat Simple_repeat 3 78 0 859 208 87 43 chr18 35524851 35525082 -50463852 + L1MEc LINE L1 35 275 -6121 331 151 0 0 chr18 35525077 35525130 -50463804 + L1MEc LINE L1 2314 2366 -4030 * 1175 176 46 9 chr18 35525130 35525346 -50463588 + L1MB5 LINE L1 5951 6174 0 1801 139 51 17 chr18 35525363 35525657 -50463277 + AluSx SINE Alu 1 304 -8 419 273 138 23 chr18 35525815 35526181 -50462753 + L1MDb LINE L1 1122 1532 -4864 204 67 0 0 chr18 35526222 35526252 -50462682 + (A)n Simple_repeat Simple_repeat 1 30 0 660 188 0 38 chr18 35527520 35527653 -50461281 - AluJb SINE Alu 0 312 185 320 229 56 100 chr18 35527656 35527763 -50461171 - L1M4 LINE L1 -1361 4785 4692 1933 138 0 20 chr18 35527763 35528060 -50460874 + AluJo SINE Alu 1 291 -21 320 229 56 100 chr18 35528060 35528183 -50460751 - L1M4 LINE L1 -1454 4692 4565 3685 227 24 46 chr18 35528261 35529452 -50459482 - L1ME1 LINE L1 -5 6230 5071 873 245 97 0 chr18 35529453 35529669 -50459265 - MLT1E2 LTR MaLR -2 652 416 283 217 0 0 chr18 35529693 35529753 -50459181 - L1ME LINE L1 -289 5877 5818 1388 205 98 37 chr18 35529815 35530191 -50458743 - MLT1E2 LTR MaLR -227 399 1 1793 148 82 55 chr18 35530202 35530567 -50458367 + THE1C LTR MaLR 1 375 0 4545 215 124 57 chr18 35530567 35530672 -50458262 - L1ME1 LINE L1 -1145 5070 4973 1886 204 28 6 chr18 35530672 35531029 -50457905 + MLT1A1 LTR MaLR 1 365 0 4545 215 124 57 chr18 35531029 35531827 -50457107 - L1ME1 LINE L1 -1242 4973 4230 1506 217 10 7 chr18 35531827 35532122 -50456812 + AluSp SINE Alu 1 296 -17 4545 215 124 57 chr18 35532122 35533030 -50455904 - L1ME1 LINE L1 -1985 4230 3136 963 117 156 0 chr18 35533035 35533189 -50455745 + MSTA LTR MaLR 1 178 -250 5096 163 27 13 chr18 35533189 35534032 -50454902 - L1M2a LINE L1 -5478 1690 836 3263 175 39 0 chr18 35534025 35534569 -50454365 - L1M2a LINE L1 -6591 577 13 * 3221 244 73 27 chr18 35534658 35534990 -50453944 - L1ME1 LINE L1 -5285 1111 796 2423 88 0 0 chr18 35534990 35535287 -50453647 - AluSg1 SINE Alu -12 297 1 3221 244 73 27 chr18 35535287 35535924 -50453010 - L1ME1 LINE L1 -5600 796 88 195 42 0 0 chr18 35535924 35535948 -50452986 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 3221 244 73 27 chr18 35535948 35536023 -50452911 - L1ME1 LINE L1 -6308 88 18 795 220 45 65 chr18 35536079 35536461 -50452473 - HAL1 LINE L1 -1320 1187 814 216 0 0 0 chr18 35536462 35536486 -50452448 + (TA)n Simple_repeat Simple_repeat 2 25 0 1904 147 0 17 chr18 35536486 35536779 -50452155 - AluSq SINE Alu -25 288 1 227 178 22 0 chr18 35536783 35536828 -50452106 - HAL1 LINE L1 -1671 836 791 295 306 12 0 chr18 35537023 35537108 -50451826 - HAL1 LINE L1 -841 1666 1581 883 140 0 15 chr18 35537111 35537247 -50451687 + L1PA15 LINE L1 5904 6037 -128 681 115 0 13 chr18 35537247 35537496 -50451438 + AluSp SINE Alu 1 297 -16 865 130 0 0 chr18 35537496 35537634 -50451300 + L1PA15 LINE L1 6026 6163 -2 681 115 0 13 chr18 35537634 35537645 -50451289 + AluSp SINE Alu 297 307 -6 2051 228 140 7 chr18 35538625 35539168 -50449766 + MLT1E2 LTR MaLR 3 617 -9 287 203 145 0 chr18 35539325 35539394 -50449540 - HsTC2 DNA Tc2 -1813 85 7 1670 161 11 45 chr18 35539399 35539685 -50449249 + AluJo SINE Alu 1 276 -36 2239 107 68 8 chr18 35540109 35540463 -50448471 - THE1C LTR MaLR 0 375 1 741 218 48 52 chr18 35540517 35540769 -50448165 - L1MC5 LINE L1 -51 7910 7660 2160 197 20 54 chr18 35540843 35540951 -50447983 - MLT1D LTR MaLR 0 505 395 2264 106 10 0 chr18 35540951 35541252 -50447682 - AluSx SINE Alu -8 304 1 2160 197 20 54 chr18 35541252 35541645 -50447289 - MLT1D LTR MaLR -110 395 21 290 110 19 10 chr18 35542952 35543005 -50445929 - MLT1D LTR MaLR -215 290 249 38 51 0 0 chr18 35543022 35543081 -50445853 + AT_rich Low_complexity Low_complexity 1 59 0 310 192 0 0 chr18 35544681 35544733 -50444201 - L1ME LINE L1 -459 6518 6467 * 4780 229 22 23 chr18 35544726 35546032 -50442902 - L1ME LINE L1 -757 6200 4896 2437 248 98 43 chr18 35546027 35547758 -50441176 - L1ME LINE L1 -4004 3134 1188 * 1919 103 3 97 chr18 35547782 35548113 -50440821 + AluSq SINE Alu 1 300 -13 365 248 81 41 chr18 35548608 35548797 -50440137 - L1ME LINE L1 -5935 1012 42 1525 192 69 71 chr18 35550316 35550486 -50438448 + MLT1C LTR MaLR 4 173 -294 2479 86 0 6 chr18 35550486 35550801 -50438133 + AluSq SINE Alu 1 313 0 1525 192 69 71 chr18 35550801 35551093 -50437841 + MLT1C LTR MaLR 173 465 -2 434 275 106 6 chr18 35551784 35552144 -50436790 + L2 LINE L2 2650 3063 -250 3319 189 25 4 chr18 35552144 35552784 -50436150 - L1MD1 LINE L1 0 6242 5586 1632 195 14 3 chr18 35552784 35553076 -50435858 - AluJo SINE Alu -17 295 1 3319 189 25 4 chr18 35553076 35553114 -50435820 - L1MD1 LINE L1 -656 5586 5550 200 338 0 13 chr18 35554313 35554390 -50434544 + CT-rich Low_complexity Low_complexity 1 76 0 1004 175 11 16 chr18 35555048 35555231 -50433703 - MLT1A2 LTR MaLR -4 370 189 222 239 30 0 chr18 35555258 35555325 -50433609 + GA-rich Low_complexity Low_complexity 2 70 0 694 169 95 7 chr18 35555330 35555478 -50433456 - MLT1A2 LTR MaLR -213 161 1 351 0 0 0 chr18 35556249 35556288 -50432646 + (TG)n Simple_repeat Simple_repeat 1 39 0 2014 133 33 13 chr18 35556854 35557154 -50431780 + AluSx SINE Alu 1 306 -6 204 313 78 16 chr18 35557327 35557455 -50431479 - L2 LINE L2 -1 3271 3136 202 139 28 0 chr18 35557520 35557556 -50431378 + A-rich Low_complexity Low_complexity 2 38 0 1948 146 0 0 chr18 35557567 35557848 -50431086 + AluSx SINE Alu 2 282 -30 1863 140 213 93 chr18 35559099 35559692 -50429242 + MER4A LTR ERV1 1 664 0 864 251 32 83 chr18 35559862 35559922 -50429012 - MLT1I LTR MaLR -22 387 326 2065 147 3 0 chr18 35559922 35560229 -50428705 - AluSx SINE Alu -2 310 3 864 251 32 83 chr18 35560229 35560369 -50428565 - MLT1I LTR MaLR -83 326 180 2022 199 15 91 chr18 35560369 35560504 -50428430 - MLT1D LTR MaLR 0 505 361 1866 160 4 0 chr18 35560504 35560822 -50428112 + AluSx SINE Alu 1 319 0 2022 199 15 91 chr18 35560822 35561232 -50427702 - MLT1D LTR MaLR -144 361 1 864 251 32 83 chr18 35561232 35561405 -50427529 - MLT1I LTR MaLR -229 180 32 1014 259 51 22 chr18 35561692 35562101 -50426833 + L1MEc LINE L1 1330 1750 -4646 3508 139 9 64 chr18 35562260 35562271 -50426663 + MER73 LTR ERVL 1 11 -633 748 189 0 15 chr18 35562271 35562403 -50426531 - FLAM_C SINE Alu 0 133 4 3508 139 9 64 chr18 35562403 35563055 -50425879 + MER73 LTR ERVL 11 644 0 7147 197 25 39 chr18 35563074 35563673 -50425261 + L1MB5 LINE L1 3425 4031 -2143 1856 146 25 0 chr18 35563673 35563968 -50424966 + AluJb SINE Alu 1 302 0 7147 197 25 39 chr18 35563968 35564122 -50424812 + L1MB5 LINE L1 4031 4186 -1988 2286 94 7 0 chr18 35564122 35564409 -50424525 + AluSc SINE Alu 1 289 -20 1583 166 0 91 chr18 35564415 35564746 -50424188 + AluJo SINE Alu 2 302 0 7147 197 25 39 chr18 35564746 35566782 -50422152 + L1MB5 LINE L1 4191 6174 0 1077 223 13 4 chr18 35566855 35567093 -50421841 + L1M4 LINE L1 4381 4620 -1526 1947 142 6 13 chr18 35567863 35568174 -50420760 + AluJb SINE Alu 1 309 -3 2827 166 30 2 chr18 35568926 35569427 -50419507 - L1MC3 LINE L1 -2 7783 7269 2099 151 0 3 chr18 35570810 35571121 -50417813 + AluSx SINE Alu 1 310 -2 1277 159 38 124 chr18 35571538 35571877 -50417057 + AluJo SINE Alu 3 312 0 2074 180 44 25 chr18 35572240 35572646 -50416288 - MLT2D LTR ERVL 0 414 1 492 143 30 30 chr18 35573808 35573941 -50414993 + CT-rich Low_complexity Low_complexity 4 136 0 2060 109 4 4 chr18 35573942 35574216 -50414718 - AluSp SINE Alu -39 274 1 544 257 47 23 chr18 35575396 35575567 -50413367 - MIR SINE MIR -70 192 18 1160 218 62 24 chr18 35576267 35576639 -50412295 - L1MC5 LINE L1 -36 7925 7540 426 229 33 87 chr18 35577582 35577765 -50411169 + MER5B DNA MER1_type 6 178 0 423 262 43 7 chr18 35578021 35578162 -50410772 - MER5A DNA MER1_type 0 189 44 211 213 33 0 chr18 35578277 35578338 -50410596 - MER5A DNA MER1_type -63 126 64 387 239 18 35 chr18 35578628 35578741 -50410193 + MER5A DNA MER1_type 61 171 -18 842 213 6 0 chr18 35579754 35579914 -50409020 + AluJb SINE Alu 137 297 -15 264 204 0 0 chr18 35580313 35580362 -50408572 + MLT1L LTR MaLR 196 244 -371 529 195 78 65 chr18 35580365 35580661 -50408273 - L1 LINE L1 -2727 3419 3137 * 1642 251 54 9 chr18 35580650 35581113 -50407821 - L1ME1 LINE L1 -1 6165 5682 1995 85 9 97 chr18 35581114 35581443 -50407491 + AluSq SINE Alu 1 300 -13 365 248 81 41 chr18 35581938 35582127 -50406807 - L1ME LINE L1 -5935 1012 42 1525 192 69 71 chr18 35583646 35583816 -50405118 + MLT1C LTR MaLR 4 173 -294 2479 86 0 6 chr18 35583816 35584131 -50404803 + AluSq SINE Alu 1 313 0 1525 192 69 71 chr18 35584131 35584423 -50404511 + MLT1C LTR MaLR 173 465 -2 432 275 106 6 chr18 35585116 35585476 -50403458 + L2 LINE L2 2650 3063 -250 3319 189 25 4 chr18 35585476 35586116 -50402818 - L1MD1 LINE L1 0 6242 5586 1657 192 14 3 chr18 35586116 35586408 -50402526 - AluJo SINE Alu -17 295 1 3319 189 25 4 chr18 35586408 35586446 -50402488 - L1MD1 LINE L1 -656 5586 5550 200 338 0 13 chr18 35587647 35587724 -50401210 + CT-rich Low_complexity Low_complexity 1 76 0 1004 175 11 16 chr18 35588382 35588565 -50400369 - MLT1A2 LTR MaLR -4 370 189 278 156 16 0 chr18 35588594 35588658 -50400276 + GA-rich Low_complexity Low_complexity 2 66 0 694 169 95 7 chr18 35588663 35588811 -50400123 - MLT1A2 LTR MaLR -213 161 1 369 0 0 0 chr18 35589582 35589623 -50399311 + (TG)n Simple_repeat Simple_repeat 1 41 0 2022 137 33 13 chr18 35590187 35590493 -50398441 + AluSx SINE Alu 1 312 0 256 285 85 0 chr18 35590659 35590789 -50398145 - L2 LINE L2 -1 3312 3172 202 139 28 0 chr18 35590852 35590888 -50398046 + A-rich Low_complexity Low_complexity 2 38 0 1933 149 0 0 chr18 35590899 35591180 -50397754 + AluSx SINE Alu 2 282 -30 189 273 91 24 chr18 35591205 35591370 -50397564 - L2 LINE L2 -213 3100 2925 200 277 87 38 chr18 35593380 35593564 -50395370 + L2 LINE L2 2679 2871 -443 199 345 50 17 chr18 35593836 35593955 -50394979 + L2 LINE L2 3150 3272 0 349 292 89 66 chr18 35595622 35595709 -50393225 - L1M4 LINE L1 -424 5754 5670 7513 37 17 0 chr18 35595709 35596695 -50392239 - L1PA4 LINE L1 0 6155 5169 349 292 89 66 chr18 35596695 35597056 -50391878 - L1M4 LINE L1 -508 5670 5264 551 324 20 16 chr18 35597301 35597545 -50391389 + L1MEc LINE L1 35 279 -6117 648 247 67 21 chr18 35598017 35598256 -50390678 + L1MEc LINE L1 656 905 -5300 621 115 0 0 chr18 35598424 35598520 -50390414 + (TA)n Simple_repeat Simple_repeat 1 96 0 1959 254 58 52 chr18 35598534 35598680 -50390254 + L1MCa LINE L1 850 994 -5613 1714 173 16 23 chr18 35598680 35598987 -50389947 + AluJo SINE Alu 1 305 -7 1959 254 58 52 chr18 35598987 35599660 -50389274 + L1MCa LINE L1 994 1662 -4945 2035 143 0 16 chr18 35599660 35599975 -50388959 + AluJb SINE Alu 1 310 -2 1959 254 58 52 chr18 35599975 35600447 -50388487 + L1MCa LINE L1 1662 2363 -4244 1141 263 116 0 chr18 35600441 35600822 -50388112 + L1MD3 LINE L1 7571 7995 0 * 503 244 83 0 chr18 35600815 35600995 -50387939 + L1MCa LINE L1 2343 2537 -4070 * 800 247 0 0 chr18 35600995 35601161 -50387773 + FRAM SINE Alu 2 167 -9 643 193 47 61 chr18 35601166 35601236 -50387698 + L1MCa LINE L1 2487 2556 -3870 2221 117 0 0 chr18 35601236 35601526 -50387408 + AluSx SINE Alu 1 290 -22 643 193 47 61 chr18 35601526 35601667 -50387267 + L1MCa LINE L1 2556 2695 -3731 306 0 0 0 chr18 35601847 35601881 -50387053 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 444 313 119 5 chr18 35605077 35605278 -50383656 - MIR SINE MIR -29 233 10 1593 189 85 59 chr18 35605624 35605876 -50383058 - L1ME2 LINE L1 0 6164 5920 2199 107 7 17 chr18 35605876 35606175 -50382759 + AluSx SINE Alu 1 296 -16 1593 189 85 59 chr18 35606175 35606460 -50382474 - L1ME2 LINE L1 -244 5920 5558 240 196 20 0 chr18 35607008 35607059 -50381875 + CT-rich Low_complexity Low_complexity 1 52 0 196 296 51 0 chr18 35607129 35607227 -50381707 + L2 LINE L2 2652 2754 -560 191 241 52 17 chr18 35607822 35607880 -50381054 + L2 LINE L2 3192 3251 -21 1933 207 112 68 chr18 35608021 35608722 -50380212 + L1MC4a LINE L1 5982 6724 -1084 1756 185 29 20 chr18 35608722 35609063 -50379871 - MER2 DNA MER2_type 0 344 1 1933 207 112 68 chr18 35609063 35609164 -50379770 + L1MC4a LINE L1 6724 6819 -989 768 186 67 62 chr18 35609168 35609501 -50379433 - MLT1B LTR MaLR 0 390 1 395 228 22 0 chr18 35609501 35609593 -50379341 + L1MC4 LINE L1 6908 7001 -1041 4870 152 38 26 chr18 35609608 35610117 -50378817 + L1MB7 LINE L1 5259 5784 -400 1579 193 43 13 chr18 35610117 35610418 -50378516 + AluJo SINE Alu 1 310 -2 4870 152 38 26 chr18 35610418 35610815 -50378119 + L1MB7 LINE L1 5784 6175 -9 337 153 0 12 chr18 35610837 35610922 -50378012 + L1MC4a LINE L1 6916 6999 -809 952 160 39 0 chr18 35610930 35611086 -50377848 + FAM SINE Alu 1 48 -1 2720 184 101 27 chr18 35611096 35611576 -50377358 + L1MC4 LINE L1 7075 7518 -524 2230 119 33 33 chr18 35611576 35611936 -50376998 - THE1B LTR MaLR 0 364 5 12129 87 1 4 chr18 35611938 35613522 -50375412 - THE1B-int LTR MaLR 0 1580 2 2241 127 33 33 chr18 35613525 35613887 -50375047 - THE1B LTR MaLR -2 362 1 2720 184 101 27 chr18 35613887 35614062 -50374872 + L1MC4 LINE L1 7519 7786 -256 369 148 0 0 chr18 35614207 35614268 -50374666 + L1MC4 LINE L1 7791 7851 -191 1936 155 3 16 chr18 35615022 35615338 -50373596 - AluJb SINE Alu 0 312 1 232 212 65 126 chr18 35616500 35616731 -50372203 + L1ME LINE L1 5699 5915 -206 835 239 84 9 chr18 35617307 35617533 -50371401 + MIR SINE MIR 20 262 0 2416 196 56 60 chr18 35618502 35619124 -50369810 + MLT1E3 LTR MaLR 1 620 -4 1533 174 57 0 chr18 35619426 35619690 -50369244 + AluJb SINE Alu 3 281 -31 1836 199 161 62 chr18 35620003 35620816 -50368118 + L1ME3 LINE L1 5202 6095 -67 216 0 0 0 chr18 35620832 35620856 -50368078 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 1109 168 155 0 chr18 35620858 35621090 -50367844 - AluJo SINE Alu -32 280 13 185 246 72 14 chr18 35621433 35621502 -50367432 - MIR SINE MIR -32 230 158 2595 50 3 0 chr18 35622667 35622969 -50365965 - AluSp SINE Alu -10 303 1 252 274 62 53 chr18 35623158 35623366 -50365568 + L2 LINE L2 3098 3307 -6 2083 102 25 0 chr18 35624021 35624325 -50364609 + AluSc SINE Alu 1 311 0 186 266 101 0 chr18 35624731 35624810 -50364124 + L2 LINE L2 1984 2070 -1244 267 143 20 0 chr18 35624883 35624932 -50364002 - MER5B DNA MER1_type -125 53 4 462 298 171 59 chr18 35624946 35625119 -50363815 + L2 LINE L2 2108 2260 -1054 1824 122 90 11 chr18 35625119 35625397 -50363537 + AluSx SINE Alu 1 300 -12 462 298 171 59 chr18 35625397 35626005 -50362929 + L2 LINE L2 2260 2977 -337 1299 240 58 3 chr18 35627540 35627852 -50361082 - MER115 DNA AcHobo -1 692 364 474 275 28 34 chr18 35627892 35628070 -50360864 - MER115 DNA AcHobo -444 249 73 211 277 40 20 chr18 35628444 35628545 -50360389 - MER91C DNA MER1_type -18 122 20 225 151 38 19 chr18 35630409 35630462 -50358472 + MIR SINE MIR 91 144 -118 1615 228 154 15 chr18 35630505 35631102 -50357832 - L1ME3A LINE L1 -5 6165 5480 240 304 114 54 chr18 35631681 35631865 -50357069 - LTR67 LTR ERVL -332 225 31 318 310 43 14 chr18 35633250 35633398 -50355536 - MIR SINE MIR -50 212 62 1762 231 77 6 chr18 35633504 35634066 -50354868 - L1ME3A LINE L1 -1976 4170 3529 624 157 0 37 chr18 35635402 35635510 -50353424 - FLAM_C SINE Alu -3 140 37 383 270 86 7 chr18 35636250 35636402 -50352532 + LTR33 LTR ERVL 47 210 -311 375 200 26 52 chr18 35636397 35636512 -50352422 + LTR33 LTR ERVL 402 513 -8 * 325 304 18 9 chr18 35638336 35638448 -50350486 + (CA)n Simple_repeat Simple_repeat 2 114 0 229 151 14 55 chr18 35638469 35638542 -50350392 + (CATATA)n Simple_repeat Simple_repeat 5 74 0 312 48 0 0 chr18 35639665 35639707 -50349227 + (TG)n Simple_repeat Simple_repeat 2 43 0 762 230 106 0 chr18 35641656 35641817 -50347117 - MER45A DNA AcHobo 0 178 1 1855 215 30 72 chr18 35642277 35642775 -50346159 + MLT2B1 LTR ERVL 1 477 -43 284 241 0 0 chr18 35642828 35642886 -50346048 + Ricksha DNA DNA 847 904 -2342 1723 169 30 10 chr18 35643107 35643403 -50345531 + AluJo SINE Alu 11 312 0 1786 230 79 9 chr18 35643426 35643883 -50345051 - MER90 LTR ERV1 -4 610 122 2324 94 10 7 chr18 35644112 35644421 -50344513 - AluSg SINE Alu 0 310 1 322 270 0 11 chr18 35644459 35644548 -50344386 - MIR SINE MIR -26 236 149 1887 144 10 13 chr18 35644791 35645097 -50343837 + AluJb SINE Alu 1 305 -7 320 255 144 39 chr18 35645466 35645619 -50343315 + MLT1H LTR MaLR 1 169 -380 335 245 47 28 chr18 35645716 35645822 -50343112 + MLT1H LTR MaLR 442 549 0 1694 93 0 74 chr18 35645999 35646256 -50342678 + AluSg/x SINE Alu 65 302 -8 418 284 63 8 chr18 35646396 35646523 -50342411 - L2 LINE L2 -1 3312 3179 879 239 66 14 chr18 35646965 35647178 -50341756 - MIR SINE MIR 0 262 39 209 29 0 57 chr18 35647414 35647449 -50341485 + (TTG)n Simple_repeat Simple_repeat 1 33 0 2111 102 0 88 chr18 35647463 35647805 -50341129 - AluSx SINE Alu 0 312 1 351 264 71 69 chr18 35648816 35649007 -50339927 + MIR SINE MIR 23 232 -30 1754 152 0 35 chr18 35649612 35649901 -50339033 + AluJo SINE Alu 16 294 -18 1817 143 22 51 chr18 35650373 35650687 -50338247 + AluSx SINE Alu 1 305 -7 854 64 0 0 chr18 35650961 35651070 -50337864 + AluSg/x SINE Alu 202 310 -2 1353 165 96 0 chr18 35651073 35651322 -50337612 - MSTB1 LTR MaLR -159 273 1 5187 235 76 42 chr18 35651923 35652469 -50336465 + L1MD2 LINE L1 783 1309 -5097 2307 113 0 0 chr18 35652469 35652778 -50336156 + AluSx SINE Alu 1 309 -3 5187 235 76 42 chr18 35652778 35652955 -50335979 + L1MD2 LINE L1 1309 1479 -4927 2372 151 83 8 chr18 35652955 35653353 -50335581 - MSTA LTR MaLR 0 428 1 5187 235 76 42 chr18 35653353 35655848 -50333086 + L1MD2 LINE L1 1479 4069 -2337 1673 92 0 4 chr18 35655848 35656076 -50332858 + AluY SINE Alu 75 301 -10 5187 235 76 42 chr18 35656076 35656292 -50332642 + L1MD2 LINE L1 4069 4276 -2130 2043 130 3 3 chr18 35656315 35656615 -50332319 + AluSc SINE Alu 1 300 -9 826 61 0 0 chr18 35656615 35656713 -50332221 + AluSq SINE Alu 134 231 -82 1823 192 72 34 chr18 35656731 35657174 -50331760 + LTR2B LTR ERV1 31 490 0 3787 233 52 45 chr18 35657192 35658311 -50330623 + L1MD2 LINE L1 4283 5423 -1196 851 137 7 7 chr18 35658311 35658450 -50330484 + L1MB8 LINE L1 6027 6165 -13 3787 233 52 45 chr18 35658450 35659181 -50329753 + L1MD2 LINE L1 5423 6148 -471 894 146 15 0 chr18 35659185 35659363 -50329571 + FLAM_C SINE Alu 1 180 0 329 221 26 0 chr18 35659364 35659441 -50329493 + L1MC4 LINE L1 5878 5956 -2086 2284 217 17 89 chr18 35659443 35660075 -50328859 - MLT1E LTR MaLR 0 593 7 484 257 145 11 chr18 35660085 35660264 -50328670 + L1ME1 LINE L1 5958 6116 -50 195 401 120 0 chr18 35660689 35660856 -50328078 + L2 LINE L2 2718 2904 -410 287 82 0 49 chr18 35661017 35661078 -50327856 + (T)n Simple_repeat Simple_repeat 1 58 0 2109 100 0 88 chr18 35661093 35661433 -50327501 - AluSx SINE Alu -2 310 1 351 264 71 69 chr18 35662457 35662648 -50326286 + MIR SINE MIR 23 232 -30 1754 152 0 35 chr18 35663253 35663542 -50325392 + AluJo SINE Alu 16 294 -18 1773 144 26 51 chr18 35664014 35664327 -50324607 + AluSx SINE Alu 1 305 -7 808 69 0 0 chr18 35664601 35664703 -50324231 + AluSg/x SINE Alu 200 301 -9 853 132 34 8 chr18 35664778 35664952 -50323982 - MSTB1 LTR MaLR -239 189 1 5178 235 76 44 chr18 35665553 35666100 -50322834 + L1MD2 LINE L1 783 1311 -5095 2282 114 0 0 chr18 35666100 35666406 -50322528 + AluSx SINE Alu 1 306 -6 5178 235 76 44 chr18 35666406 35666583 -50322351 + L1MD2 LINE L1 1311 1481 -4925 2367 151 83 8 chr18 35666583 35666981 -50321953 - MSTA LTR MaLR 0 428 1 5178 235 76 44 chr18 35666981 35669477 -50319457 + L1MD2 LINE L1 1481 4065 -2341 1764 84 0 4 chr18 35669477 35669714 -50319220 + AluY SINE Alu 75 310 -1 5178 235 76 44 chr18 35669714 35669933 -50319001 + L1MD2 LINE L1 4065 4276 -2130 2076 127 3 3 chr18 35669956 35670256 -50318678 + AluSc SINE Alu 1 300 -9 826 61 0 0 chr18 35670256 35670354 -50318580 + AluSq SINE Alu 134 231 -82 1802 194 72 34 chr18 35670372 35670815 -50318119 + LTR2B LTR ERV1 31 490 0 3835 232 52 45 chr18 35670833 35671952 -50316982 + L1MD2 LINE L1 4283 5423 -1196 825 144 7 7 chr18 35671952 35672091 -50316843 + L1MB8 LINE L1 6027 6165 -13 3835 232 52 45 chr18 35672091 35672822 -50316112 + L1MD2 LINE L1 5423 6148 -471 902 145 15 0 chr18 35672826 35673008 -50315926 + FLAM_C SINE Alu 1 184 0 311 234 26 0 chr18 35673009 35673086 -50315848 + L1MC4 LINE L1 5878 5956 -2086 2241 215 32 88 chr18 35673088 35673710 -50315224 - MLT1E LTR MaLR 0 593 7 507 251 145 11 chr18 35673720 35673899 -50315035 + L1ME1 LINE L1 5958 6116 -50 234 389 120 0 chr18 35674323 35674490 -50314444 + L2 LINE L2 2718 2904 -410 457 245 85 32 chr18 35674510 35674698 -50314236 - L1ME3A LINE L1 -5 6165 5968 270 324 87 48 chr18 35674726 35674933 -50314001 + L2 LINE L2 2895 3109 -163 2036 228 83 94 chr18 35675034 35675831 -50313103 + L1MC5 LINE L1 5277 6082 -1879 333 0 0 0 chr18 35675831 35675868 -50313066 + (CA)n Simple_repeat Simple_repeat 2 38 0 2546 178 34 34 chr18 35675869 35676368 -50312566 - MLT1D LTR MaLR -4 501 3 2036 228 83 94 chr18 35676368 35676733 -50312201 + L1MC5 LINE L1 6082 6450 -1511 180 0 0 0 chr18 35676733 35676753 -50312181 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2036 228 83 94 chr18 35676753 35677593 -50311341 + L1MC5 LINE L1 6450 7236 -725 6025 126 29 49 chr18 35677628 35677764 -50311170 - L1MA9 LINE L1 -2 6310 6173 315 0 0 0 chr18 35677764 35677799 -50311135 + (TG)n Simple_repeat Simple_repeat 2 36 0 6025 126 29 49 chr18 35677799 35678821 -50310113 - L1MA9 LINE L1 -139 6173 5173 792 262 60 67 chr18 35678824 35679240 -50309694 + LTR68 LTR ERV1 1 413 -327 1939 214 43 61 chr18 35679423 35680169 -50308765 + L1MC5 LINE L1 7260 7907 -54 308 254 241 9 chr18 35680728 35680948 -50307986 - L1ME4a LINE L1 -1 6120 5850 1595 133 4 4 chr18 35680952 35681186 -50307748 - AluJb SINE Alu -73 239 6 2602 223 113 20 chr18 35681192 35682027 -50306907 - L1ME3 LINE L1 -213 5949 5051 329 233 143 8 chr18 35682014 35682147 -50306787 - L1ME4a LINE L1 -281 5840 5690 * 335 323 8 10 chr18 35682209 35682332 -50306602 - MIR SINE MIR -88 120 38 253 207 17 17 chr18 35682375 35682433 -50306501 - L1ME4a LINE L1 -456 5665 5608 231 114 0 0 chr18 35682572 35682607 -50306327 + (TG)n Simple_repeat Simple_repeat 2 36 0 342 206 0 0 chr18 35682607 35682643 -50306291 + (TATATG)n Simple_repeat Simple_repeat 4 73 0 339 315 160 5 chr18 35682655 35682855 -50306079 - MIR SINE MIR -12 250 20 608 276 88 60 chr18 35682890 35683028 -50305906 + LTR33 LTR ERVL 6 139 -382 3249 158 23 2 chr18 35683028 35683542 -50305392 + LTR45 LTR ERV1 1 525 0 608 276 88 60 chr18 35683542 35683802 -50305132 + LTR33 LTR ERVL 139 415 -106 23 0 0 0 chr18 35683802 35683825 -50305109 + AT_rich Low_complexity Low_complexity 1 23 0 403 321 77 27 chr18 35683870 35684169 -50304765 - L1MCc LINE L1 -6095 328 15 896 231 29 55 chr18 35684176 35684547 -50304387 - L1MD3 LINE L1 0 8042 7690 317 23 0 23 chr18 35684602 35684645 -50304289 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 1171 56 14 0 chr18 35684645 35684788 -50304146 - MER107 DNA MER1_type -52 145 1 1471 249 101 35 chr18 35685023 35685667 -50303267 + L1MCc LINE L1 869 1573 -4972 1785 150 61 3 chr18 35685667 35685960 -50302974 + AluJb SINE Alu 2 311 -1 1471 249 101 35 chr18 35685960 35686053 -50302881 + L1MCc LINE L1 1573 1658 -4887 1090 274 40 44 chr18 35686193 35686537 -50302397 + L1MCc LINE L1 2285 2628 -4494 1706 100 0 4 chr18 35686537 35686766 -50302168 + AluSq SINE Alu 82 309 -4 1090 274 40 44 chr18 35686766 35686918 -50302016 + L1MCc LINE L1 2628 2779 -4343 1492 183 7 15 chr18 35686956 35687229 -50301705 - AluJo SINE Alu -21 291 21 1228 239 30 6 chr18 35687682 35688230 -50300704 + L1MCc LINE L1 2773 3415 -3526 518 260 218 40 chr18 35688248 35688767 -50300167 - HAL1 LINE L1 -1089 1418 808 320 302 40 54 chr18 35689091 35689240 -50299694 - HAL1 LINE L1 -1870 637 491 274 214 34 111 chr18 35689263 35689380 -50299554 - MER45A DNA AcHobo 0 178 71 447 122 14 27 chr18 35689554 35689628 -50299306 - AluJo SINE Alu -176 136 64 308 278 135 16 chr18 35689766 35689892 -50299042 - HAL1 LINE L1 -2359 148 8 305 244 148 59 chr18 35689998 35690133 -50298801 + MIR SINE MIR 60 206 -56 1022 167 6 28 chr18 35690575 35690755 -50298179 + FAM SINE Alu 1 48 -1 548 40 27 0 chr18 35691633 35691707 -50297227 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 210 37 0 0 chr18 35691969 35691996 -50296938 + (T)n Simple_repeat Simple_repeat 1 27 0 2784 234 46 43 chr18 35691997 35692739 -50296195 - MER21B LTR ERV1 -99 764 21 2034 135 11 0 chr18 35693352 35693685 -50295249 - AluSq SINE Alu 0 336 1 246 259 0 0 chr18 35693820 35693874 -50295060 - L2 LINE L2 -12 3301 3248 602 212 35 76 chr18 35694178 35694376 -50294558 - L1ME3A LINE L1 -8 6162 5973 2767 194 21 68 chr18 35694469 35694511 -50294423 - L1ME2 LINE L1 -105 6059 6017 1681 191 113 113 chr18 35694511 35695122 -50293812 - LTR36 LTR ERV1 0 611 1 2767 194 21 68 chr18 35695122 35695185 -50293749 - L1ME2 LINE L1 -147 6017 5953 1554 176 3 97 chr18 35695185 35695515 -50293419 - AluJo SINE Alu -3 299 1 2767 194 21 68 chr18 35695515 35696063 -50292871 - L1ME2 LINE L1 -211 5953 5444 1850 131 92 0 chr18 35696063 35696345 -50292589 - AluSx SINE Alu -4 308 1 2767 194 21 68 chr18 35696345 35696457 -50292477 - L1ME2 LINE L1 -720 5444 5328 2284 99 0 3 chr18 35696567 35696861 -50292073 - AluSx SINE Alu -19 293 1 249 311 68 0 chr18 35696997 35697061 -50291873 + MLT1J LTR MaLR 15 83 -428 529 209 9 19 chr18 35697061 35697166 -50291768 + MER81 DNA DNA 1 104 -10 368 224 179 45 chr18 35697179 35697313 -50291621 + MLT1J LTR MaLR 108 259 -252 378 232 145 7 chr18 35697326 35697464 -50291470 - MLT1J LTR MaLR 0 511 355 1026 268 154 69 chr18 35697465 35698103 -50290831 + L3 LINE CR1 310 1001 -576 226 230 103 11 chr18 35698156 35698243 -50290691 + L3 LINE CR1 1184 1278 -299 2263 119 0 0 chr18 35698806 35699109 -50289825 + AluSq SINE Alu 1 303 -10 618 171 66 61 chr18 35699120 35699301 -50289633 + L1MB1 LINE L1 6017 6167 -1 1643 183 3 18 chr18 35699354 35699638 -50289296 + AluJb SINE Alu 1 280 -32 308 229 24 0 chr18 35699717 35699800 -50289134 + L1MEd LINE L1 2557 2641 -3488 794 134 8 31 chr18 35699864 35699991 -50288943 + FLAM_C SINE Alu 2 125 -18 556 310 107 65 chr18 35699995 35700607 -50288327 + L1MEc LINE L1 79 734 -5385 2246 88 0 23 chr18 35700607 35700913 -50288021 + AluSc SINE Alu 1 299 -10 556 310 107 65 chr18 35700913 35701103 -50287831 + L1MEc LINE L1 734 915 -5204 2126 209 47 35 chr18 35701153 35701318 -50287616 + L1MEd LINE L1 2569 2731 -3398 2250 108 0 0 chr18 35701318 35701614 -50287320 - AluSx SINE Alu -16 296 1 2126 209 47 35 chr18 35701614 35702071 -50286863 + L1MEd LINE L1 2731 3198 -2931 5283 222 90 37 chr18 35702313 35703545 -50285389 + L1MEd LINE L1 3177 4519 -1610 1639 160 55 4 chr18 35703545 35703863 -50285071 + AluSx SINE Alu 1 332 0 5283 222 90 37 chr18 35703863 35704239 -50284695 + L1MEd LINE L1 4519 4873 -1256 3138 191 59 33 chr18 35704269 35705018 -50283916 + L1MB7 LINE L1 5409 6176 -8 1099 234 48 28 chr18 35705021 35705458 -50283476 + L1MEc LINE L1 949 1250 -4869 420 204 21 0 chr18 35705426 35705519 -50283415 + L1MD2 LINE L1 5778 5872 -470 * 811 232 34 1 chr18 35705537 35705730 -50283204 - MLT1B LTR MaLR -6 380 173 396 0 0 0 chr18 35705738 35705782 -50283152 + (GA)n Simple_repeat Simple_repeat 1 44 0 232 158 0 0 chr18 35705808 35705846 -50283088 - MLT1B LTR MaLR -287 103 66 971 201 68 39 chr18 35705896 35706130 -50282804 + L1MD2 LINE L1 5886 6126 -216 681 225 19 6 chr18 35706131 35706291 -50282643 + L1MD2 LINE L1 6179 6340 -2 26 30 0 0 chr18 35706368 35706401 -50282533 + AT_rich Low_complexity Low_complexity 1 33 0 1558 174 76 4 chr18 35706486 35706762 -50282172 - AluJo SINE Alu -16 296 1 218 350 58 0 chr18 35707060 35707180 -50281754 + L3 LINE CR1 1333 1459 -118 495 73 0 0 chr18 35707312 35707380 -50281554 + (CA)n Simple_repeat Simple_repeat 1 68 0 2206 122 0 3 chr18 35707471 35707775 -50281159 + AluSq SINE Alu 1 303 -10 271 284 0 49 chr18 35708051 35708153 -50280781 + MER5A DNA MER1_type 87 183 -6 22 0 0 0 chr18 35708586 35708608 -50280326 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr18 35708849 35708870 -50280064 + AT_rich Low_complexity Low_complexity 1 21 0 618 285 128 37 chr18 35709054 35709430 -50279504 + HAL1 LINE L1 1395 1804 -703 635 282 35 68 chr18 35710326 35710649 -50278285 + MLT1I LTR MaLR 98 386 -23 2323 111 0 0 chr18 35711897 35712203 -50276731 - AluSx SINE Alu -6 306 1 2358 110 0 0 chr18 35712541 35712851 -50276083 - AluSx SINE Alu -2 310 1 1569 207 15 126 chr18 35712964 35713134 -50275800 + L1MDa LINE L1 66 253 -6287 2328 115 0 6 chr18 35713134 35713448 -50275486 - AluSx SINE Alu 0 312 1 1569 207 15 126 chr18 35713448 35713817 -50275117 + L1MDa LINE L1 253 545 -5995 764 131 92 120 chr18 35713873 35713917 -50275017 + L1MD2 LINE L1 5859 5903 -277 2685 84 8 19 chr18 35713917 35714276 -50274658 - THE1A LTR MaLR 0 355 1 764 131 92 120 chr18 35714276 35714467 -50274467 + L1MD2 LINE L1 5903 6077 -103 492 171 13 0 chr18 35715100 35715251 -50273683 + L1MD2 LINE L1 6064 6267 -92 803 183 135 22 chr18 35716736 35716966 -50271968 - L1MB8 LINE L1 0 6178 5923 1614 139 20 108 chr18 35716966 35717318 -50271616 - MER7A DNA MER2_type -1 345 27 2985 199 33 7 chr18 35717327 35718024 -50270910 - L1MB8 LINE L1 -253 5925 5215 409 350 93 70 chr18 35718918 35719526 -50269408 - L1M2 LINE L1 -5463 1386 875 180 0 0 0 chr18 35719526 35719546 -50269388 + (CCG)n Simple_repeat Simple_repeat 3 22 0 409 350 93 70 chr18 35719546 35719786 -50269148 - L1M2 LINE L1 -5974 875 642 336 273 140 7 chr18 35720388 35720538 -50268396 - MIR SINE MIR -76 186 17 644 183 153 0 chr18 35720557 35720694 -50268240 - MER3 DNA MER1_type 0 209 52 373 198 66 57 chr18 35720725 35720831 -50268103 - L2 LINE L2 -10 3262 3156 268 294 33 0 chr18 35720881 35720973 -50267961 + MER5A DNA MER1_type 10 104 -85 442 321 14 21 chr18 35721151 35721291 -50267643 + L2 LINE L2 3134 3272 0 288 196 7 4 chr18 35721320 35721379 -50267555 + FRAM/FAM SINE Alu 1 44 -122 853 226 28 0 chr18 35721673 35721854 -50267080 - L1MD3 LINE L1 -169 7826 7641 188 262 75 67 chr18 35722255 35722284 -50266650 - L2 LINE L2 -1 3312 3285 2212 145 12 32 chr18 35722284 35722628 -50266306 - MER1B DNA MER1_type 0 337 1 188 262 75 67 chr18 35722628 35722842 -50266092 - L2 LINE L2 -28 3285 3019 4229 205 121 46 chr18 35723178 35723774 -50265160 - L1MD1 LINE L1 -85 6551 6001 301 114 0 0 chr18 35723774 35723818 -50265116 - Alu SINE Alu -259 44 1 4229 205 121 46 chr18 35723818 35724300 -50264634 - L1MD1 LINE L1 -635 6001 5556 207 114 0 0 chr18 35724300 35724335 -50264599 + (TG)n Simple_repeat Simple_repeat 2 36 0 4229 205 121 46 chr18 35724335 35725478 -50263456 - L1MD1 LINE L1 -1080 5556 4106 956 215 64 13 chr18 35725470 35725768 -50263166 - L1MD1 LINE L1 -3117 3423 3111 * 3875 203 97 31 chr18 35725895 35727460 -50261474 - L1MD1 LINE L1 -4636 1904 15 697 213 167 30 chr18 35727460 35727723 -50261211 - MER5C DNA MER1_type -25 299 1 21 57 0 0 chr18 35727964 35727999 -50260935 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr18 35728578 35728599 -50260335 + AT_rich Low_complexity Low_complexity 1 21 0 278 258 0 0 chr18 35729106 35729168 -50259766 - MIR SINE MIR -29 233 172 182 352 16 32 chr18 35729306 35729431 -50259503 - L2 LINE L2 -492 2822 2700 294 248 136 63 chr18 35729598 35729804 -50259130 - L2 LINE L2 -882 2432 2212 404 279 100 7 chr18 35729895 35730035 -50258899 - L2 LINE L2 -6 3307 3155 372 297 168 52 chr18 35730034 35730484 -50258450 - L2 LINE L2 -234 3038 2539 * 275 220 79 141 chr18 35731255 35731416 -50257518 - Charlie8 DNA MER1_type -2142 275 130 2157 116 0 3 chr18 35731416 35731710 -50257224 - AluSx SINE Alu -19 293 1 275 220 79 141 chr18 35731710 35731775 -50257159 - Charlie8 DNA MER1_type -2287 130 63 187 330 18 37 chr18 35731881 35731990 -50256944 - L2 LINE L2 -1681 1633 1527 313 198 60 43 chr18 35734624 35734740 -50254194 - LTR67 LTR ERVL -11 546 429 188 324 15 15 chr18 35735293 35735361 -50253573 - MIR SINE MIR -156 106 39 549 175 0 0 chr18 35735574 35735677 -50253257 - L1MA4 LINE L1 -130 6352 6250 246 32 0 0 chr18 35735689 35735720 -50253214 + (TCCCC)n Simple_repeat Simple_repeat 1 31 0 1908 97 35 0 chr18 35735836 35736095 -50252839 - AluSq SINE Alu -43 270 3 6541 188 79 17 chr18 35736098 35737129 -50251805 - L1MA4 LINE L1 -247 6235 5269 1716 189 30 10 chr18 35737129 35737426 -50251508 - AluJo SINE Alu -9 303 1 6541 188 79 17 chr18 35737426 35739576 -50249358 - L1MA4 LINE L1 -1213 5269 2805 3679 203 45 4 chr18 35739582 35740902 -50248032 - L1MA4 LINE L1 -4065 1263 599 1522 194 79 0 chr18 35740930 35741259 -50247675 - L1MA4 LINE L1 -4960 368 14 312 238 30 20 chr18 35741537 35741638 -50247296 + MLT1K LTR MaLR 484 585 -3 5365 118 25 6 chr18 35741686 35742567 -50246367 - L1PA15 LINE L1 0 6165 5270 295 346 148 19 chr18 35742632 35742794 -50246140 + MIR3 SINE MIR 19 201 -7 2012 128 55 0 chr18 35742990 35743280 -50245654 + AluSg SINE Alu 1 306 -4 384 191 0 24 chr18 35743417 35743501 -50245433 - L1MC5 LINE L1 -48 7913 7832 1182 279 72 8 chr18 35743753 35744130 -50244804 - MLT1I LTR MaLR -8 401 1 369 0 0 0 chr18 35744585 35744626 -50244308 + (TG)n Simple_repeat Simple_repeat 2 42 0 757 285 78 43 chr18 35745219 35745703 -50243231 - MLT1J LTR MaLR 0 511 11 419 274 103 11 chr18 35745728 35746078 -50242856 - L1M4 LINE L1 -1487 4659 4278 381 286 73 62 chr18 35746330 35746508 -50242426 - L2 LINE L2 -1 3312 3133 188 292 124 22 chr18 35747837 35747974 -50240960 - L2 LINE L2 -303 2969 2819 624 304 97 16 chr18 35747980 35748289 -50240645 + L2 LINE L2 2953 3286 -27 1655 195 88 38 chr18 35748369 35748846 -50240088 - Charlie1b DNA MER1_type -22 501 1 21 57 0 0 chr18 35749159 35749194 -50239740 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr18 35750210 35750238 -50238696 + AT_rich Low_complexity Low_complexity 1 28 0 2174 109 10 3 chr18 35750338 35750632 -50238302 + AluSq SINE Alu 1 296 -17 21 36 0 0 chr18 35750692 35750720 -50238214 + AT_rich Low_complexity Low_complexity 1 28 0 249 272 65 101 chr18 35750762 35750979 -50237955 + L2 LINE L2 3055 3263 -50 814 285 77 72 chr18 35751079 35751913 -50237021 + L1ME3A LINE L1 3 840 -5279 1135 268 66 63 chr18 35751953 35753017 -50235917 + L1ME3A LINE L1 3725 4791 -1338 953 183 11 0 chr18 35753630 35753805 -50235129 - MER58A DNA MER1_type 0 224 48 240 269 39 10 chr18 35753849 35753953 -50234981 + L1ME3A LINE L1 5822 5928 -225 636 279 75 5 chr18 35753997 35754198 -50234736 + MIR SINE MIR 44 258 -4 267 185 108 0 chr18 35754615 35754680 -50234254 + MIR SINE MIR 118 189 -73 299 330 57 9 chr18 35754953 35755059 -50233875 + L2 LINE L2 3203 3313 0 391 273 35 52 chr18 35755219 35755505 -50233429 - L1MC5 LINE L1 -45 7916 7636 296 231 190 83 chr18 35757805 35758021 -50230913 - MLT1L LTR MaLR -41 470 232 574 263 131 44 chr18 35758468 35758926 -50230008 - L1ME3 LINE L1 -333 5763 5346 1743 173 3 45 chr18 35758926 35759238 -50229696 - AluJo SINE Alu -5 307 9 574 263 131 44 chr18 35759238 35759973 -50228961 - L1ME3 LINE L1 -750 5346 4424 1875 164 3 43 chr18 35759982 35760306 -50228628 - AluJb SINE Alu -1 311 1 294 256 161 26 chr18 35760342 35760572 -50228362 - L1ME3 LINE L1 -1819 4261 4001 650 287 21 0 chr18 35760748 35760985 -50227949 - L1ME3 LINE L1 -4452 1809 1568 905 266 86 39 chr18 35761047 35762092 -50226842 - L1ME3 LINE L1 -4895 1366 234 390 288 129 45 chr18 35762169 35762478 -50226456 - L1MEc LINE L1 -3999 2397 2063 408 311 98 40 chr18 35762615 35762840 -50226094 - L2 LINE L2 -1 3312 3075 200 289 236 5 chr18 35762947 35763155 -50225779 - L2 LINE L2 -1052 2262 2007 221 299 62 52 chr18 35763970 35764067 -50224867 + L2 LINE L2 3139 3236 -36 647 270 129 51 chr18 35764323 35764756 -50224178 - MLT1L LTR MaLR -10 605 139 292 280 72 56 chr18 35764988 35765113 -50223821 - L2 LINE L2 -4 3268 3142 40752 50 8 1 chr18 35765343 35771416 -50217518 + L1PA5 LINE L1 1 6110 -44 229 309 101 68 chr18 35771989 35772196 -50216738 - MIR SINE MIR 0 262 49 2693 149 73 42 chr18 35772251 35772796 -50216138 - MER68 LTR ERV1 0 562 1 653 247 129 15 chr18 35772920 35773191 -50215743 - MER68 LTR ERV1 -25 537 236 462 204 48 66 chr18 35774001 35774168 -50214766 + MER103 DNA DNA 1 164 -2 12904 127 64 27 chr18 35774607 35776094 -50212840 + Tigger1 DNA MER2_type 1 1608 -810 2285 169 58 46 chr18 35776094 35776597 -50212337 - LTR22 LTR ERVK 0 509 1 12904 127 64 27 chr18 35776597 35777440 -50211494 + Tigger1 DNA MER2_type 1608 2418 0 2266 103 0 3 chr18 35777675 35777976 -50210958 - AluSq SINE Alu -13 300 1 228 308 0 0 chr18 35778068 35778133 -50210801 + L1M4 LINE L1 4054 4118 -2028 565 307 100 15 chr18 35778291 35778763 -50210171 + L1M4 LINE L1 4456 4967 -1179 791 180 0 8 chr18 35778874 35779002 -50209932 - FLAM_C SINE Alu -4 129 3 1721 154 18 11 chr18 35779041 35779326 -50209608 + AluJb SINE Alu 1 287 -25 311 263 62 23 chr18 35779488 35779723 -50209211 + L1ME3A LINE L1 5411 5655 -515 992 225 86 22 chr18 35779738 35780005 -50208929 + MER58B DNA MER1_type 57 340 -1 414 301 75 9 chr18 35780025 35780238 -50208696 + L1ME3A LINE L1 5666 5892 -278 1775 95 36 113 chr18 35781359 35781696 -50207238 + AluYb8 SINE Alu 1 311 -7 1979 145 0 0 chr18 35782586 35782869 -50206065 + AluSx SINE Alu 1 283 -29 319 50 0 0 chr18 35782869 35782909 -50206025 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 225 0 0 0 chr18 35783096 35783121 -50205813 + (T)n Simple_repeat Simple_repeat 1 25 0 2446 146 22 37 chr18 35783234 35784151 -50204783 - L1P4 LINE L1 -392 5774 4873 1310 182 90 16 chr18 35784157 35784574 -50204360 + L1M4 LINE L1 5030 5470 -704 3087 161 22 7 chr18 35785165 35785711 -50203223 - MER41A LTR ERV1 0 554 1 223 240 0 0 chr18 35785900 35785950 -50202984 + MIR SINE MIR 105 154 -108 23 68 0 0 chr18 35786098 35786142 -50202792 + AT_rich Low_complexity Low_complexity 1 44 0 21 57 0 0 chr18 35786544 35786579 -50202355 + AT_rich Low_complexity Low_complexity 1 35 0 2403 73 13 0 chr18 35786867 35787168 -50201766 + AluSp SINE Alu 1 305 -8 182 210 123 49 chr18 35787234 35787315 -50201619 + MER5C DNA MER1_type 36 122 -202 456 304 44 20 chr18 35787973 35788177 -50200757 - L2 LINE L2 -1227 2087 1879 1933 151 0 0 chr18 35788765 35789049 -50199885 + AluSx SINE Alu 1 284 -28 243 103 0 0 chr18 35789049 35789088 -50199846 + (TTAA)n Simple_repeat Simple_repeat 3 41 0 2404 68 13 13 chr18 35789275 35789585 -50199349 - AluY SINE Alu -1 310 1 424 274 226 3 chr18 35789616 35789930 -50199004 - L1M4 LINE L1 -1803 4343 3960 1931 200 109 18 chr18 35789934 35790034 -50198900 - MLT1F1 LTR MaLR -6 561 471 1988 144 128 10 chr18 35790034 35790417 -50198517 - MSTA LTR MaLR 0 428 1 1931 200 109 18 chr18 35790417 35790767 -50198167 - MLT1F1 LTR MaLR -96 471 70 395 269 28 83 chr18 35790850 35791066 -50197868 + L2 LINE L2 2242 2445 -869 308 318 60 33 chr18 35791308 35791459 -50197475 + L2 LINE L2 3115 3269 -44 22 0 0 0 chr18 35791543 35791565 -50197369 + AT_rich Low_complexity Low_complexity 1 22 0 658 186 31 0 chr18 35791955 35792084 -50196850 + FLAM_C SINE Alu 1 133 0 569 162 0 8 chr18 35792099 35792216 -50196718 + GA-rich Low_complexity Low_complexity 3 118 0 1620 101 0 28 chr18 35792307 35792554 -50196380 + Tigger5 DNA MER2_type 2084 2323 0 582 273 96 0 chr18 35792794 35792981 -50195953 - L1ME1 LINE L1 -5 6161 5957 1873 205 98 90 chr18 35792989 35793891 -50195043 - L1ME1 LINE L1 -357 5809 4884 6493 113 36 16 chr18 35794137 35795187 -50193747 - MER11C LTR ERVK 0 1071 1 26 74 0 0 chr18 35795458 35795512 -50193422 + AT_rich Low_complexity Low_complexity 1 54 0 548 261 77 4 chr18 35798237 35798462 -50190472 - L1M3 LINE L1 -722 5458 5210 33 56 0 0 chr18 35798506 35798560 -50190374 + AT_rich Low_complexity Low_complexity 1 54 0 30 0 0 0 chr18 35798669 35798699 -50190235 + AT_rich Low_complexity Low_complexity 1 30 0 25 51 0 0 chr18 35799539 35799578 -50189356 + AT_rich Low_complexity Low_complexity 1 39 0 439 203 32 41 chr18 35800325 35800448 -50188486 - L2 LINE L2 -16 3297 3176 422 340 55 48 chr18 35800628 35801043 -50187891 - L2 LINE L2 -441 2873 2456 1995 132 6 25 chr18 35801131 35801449 -50187485 - AluSx SINE Alu 0 312 1 2333 112 0 0 chr18 35802759 35803064 -50185870 - AluSx SINE Alu -6 306 2 427 232 7 65 chr18 35805227 35805272 -50183662 - L1MC5 LINE L1 -48 7913 7867 2244 123 0 3 chr18 35805272 35805580 -50183354 + AluSx SINE Alu 1 307 -5 427 232 7 65 chr18 35805580 35805672 -50183262 - L1MC5 LINE L1 -94 7867 7784 518 136 150 41 chr18 35805688 35805835 -50183099 - L1MC5 LINE L1 -498 7463 7301 1736 253 108 12 chr18 35808175 35808748 -50180186 - L1ME3 LINE L1 -26 6136 5509 440 313 83 5 chr18 35808768 35808960 -50179974 + HAL1 LINE L1 486 692 -1815 2365 253 98 38 chr18 35809065 35810345 -50178589 + HAL1 LINE L1 729 2160 -347 383 191 22 22 chr18 35811023 35811112 -50177822 - L1MC5 LINE L1 -36 7925 7837 597 285 151 55 chr18 35811143 35811455 -50177479 + MLT1F LTR MaLR 13 354 -188 1212 184 83 64 chr18 35811464 35811871 -50177063 - L1MC5 LINE L1 -219 7742 7328 367 236 171 39 chr18 35812032 35812417 -50176517 + L1M4 LINE L1 2907 3342 -2804 409 268 123 42 chr18 35812418 35812600 -50176334 + L1M4 LINE L1 3127 3293 -2853 1427 147 0 8 chr18 35812600 35812845 -50176089 + L1MB1 LINE L1 5921 6163 -5 409 268 123 42 chr18 35812845 35812994 -50175940 + L1M4 LINE L1 3293 3485 -2661 2183 102 7 0 chr18 35813015 35813309 -50175625 + AluY SINE Alu 1 296 -15 2143 280 86 61 chr18 35813378 35814065 -50174869 + L1M4 LINE L1 3607 4275 -1871 1792 176 0 13 chr18 35814065 35814367 -50174567 + AluJo SINE Alu 3 300 -12 2143 280 86 61 chr18 35814367 35815127 -50173807 + L1M4 LINE L1 4275 5090 -1056 1229 163 0 19 chr18 35815283 35815492 -50173442 - AluJb SINE Alu -23 289 85 484 117 39 0 chr18 35815594 35815671 -50173263 + MER116 DNA Mariner 1 80 0 497 258 192 0 chr18 35816109 35816260 -50172674 + MIR SINE MIR 54 233 -29 537 294 154 9 chr18 35816873 35817087 -50171847 - MIR SINE MIR -10 252 8 519 290 57 0 chr18 35817437 35817613 -50171321 + MIR SINE MIR 51 236 -26 753 172 8 0 chr18 35817670 35817792 -50171142 - FLAM_C SINE Alu -10 123 1 3457 138 32 7 chr18 35817878 35818436 -50170498 - MER7C DNA MER2_type 0 602 31 441 231 8 41 chr18 35818532 35818653 -50170281 - LTR41 LTR ERVL -586 187 71 2515 68 0 0 chr18 35818757 35819065 -50169869 + AluY SINE Alu 1 308 -3 23 0 0 0 chr18 35819738 35819761 -50169173 + AT_rich Low_complexity Low_complexity 1 23 0 198 222 0 0 chr18 35821198 35821234 -50167700 + L2 LINE L2 3263 3298 -15 22 56 0 0 chr18 35821982 35822018 -50166916 + AT_rich Low_complexity Low_complexity 1 36 0 349 208 20 30 chr18 35822527 35822628 -50166306 - MER103 DNA DNA -46 120 21 585 298 122 70 chr18 35823937 35824598 -50164336 + L2 LINE L2 2584 3271 -1 285 196 0 0 chr18 35824750 35824806 -50164128 - MIR SINE MIR -94 168 113 580 284 68 11 chr18 35825854 35826044 -50162890 + MIR SINE MIR 14 214 -48 189 0 0 0 chr18 35826964 35826985 -50161949 + (A)n Simple_repeat Simple_repeat 1 21 0 24 0 0 0 chr18 35827725 35827749 -50161185 + AT_rich Low_complexity Low_complexity 1 24 0 446 276 115 62 chr18 35828662 35829115 -50159819 + L1MEd LINE L1 3 479 -5640 966 289 94 65 chr18 35829117 35829848 -50159086 + L1M4 LINE L1 3604 4313 -1833 1795 163 0 7 chr18 35829848 35830142 -50158792 + AluJb SINE Alu 9 300 -12 966 289 94 65 chr18 35830142 35830806 -50158128 + L1M4 LINE L1 4313 5039 -1107 790 176 28 66 chr18 35830808 35830990 -50157944 + AluJb SINE Alu 132 306 -6 240 302 28 28 chr18 35833981 35834087 -50154847 + MIR3 SINE MIR 96 201 -7 260 255 10 98 chr18 35835352 35835454 -50153480 + MIR SINE MIR 157 249 -13 459 347 73 26 chr18 35835500 35835840 -50153094 - L3 LINE CR1 -730 847 492 21 0 0 0 chr18 35836702 35836723 -50152211 + AT_rich Low_complexity Low_complexity 1 21 0 2420 257 194 33 chr18 35836971 35838431 -50150503 - L2 LINE L2 -1 3312 1613 1640 162 3 16 chr18 35838434 35838742 -50150192 + L1MB2 LINE L1 5447 5750 -421 2213 147 13 5 chr18 35838853 35839248 -50149686 + L1MB2 LINE L1 5774 6171 0 511 278 52 61 chr18 35839268 35839595 -50149339 - L2 LINE L2 -1714 1600 1277 431 273 238 12 chr18 35840658 35840876 -50148058 - MIR SINE MIR -2 260 12 345 284 47 8 chr18 35841198 35841325 -50147609 - MIR SINE MIR -6 256 125 442 157 11 11 chr18 35841520 35841609 -50147325 - MER103 DNA DNA -76 90 2 197 233 33 67 chr18 35841663 35841723 -50147211 - MIR SINE MIR -141 121 64 1932 146 0 3 chr18 35842241 35842559 -50146375 + AluSx SINE Alu 1 317 0 818 150 33 20 chr18 35842561 35842714 -50146220 - MER3 DNA MER1_type -54 155 1 2068 87 0 24 chr18 35842751 35843064 -50145870 + AluSg1 SINE Alu 1 306 0 713 150 0 17 chr18 35844720 35844840 -50144094 - AluJb SINE Alu -194 118 1 1711 189 20 14 chr18 35845127 35845423 -50143511 - AluJo SINE Alu -14 298 1 1960 159 7 0 chr18 35848367 35848663 -50140271 - AluJb SINE Alu -14 298 1 2427 84 3 0 chr18 35848690 35848999 -50139935 - AluSq SINE Alu -3 310 1 236 390 56 20 chr18 35849275 35849470 -50139464 + L2 LINE L2 2977 3178 -94 399 220 30 10 chr18 35849619 35849719 -50139215 - MER20B DNA MER1_type -620 163 62 339 273 163 64 chr18 35849800 35850126 -50138808 - MLT1J LTR MaLR -54 457 100 245 195 0 0 chr18 35850090 35850131 -50138803 - LTR67 LTR ERVL -418 139 99 * 2099 70 40 33 chr18 35850284 35850585 -50138349 + AluY SINE Alu 1 303 -8 581 274 57 24 chr18 35850662 35850874 -50138060 - LTR16A LTR ERVL 0 450 232 322 335 44 63 chr18 35850937 35851143 -50137791 - MIR3 SINE MIR -1 207 6 736 273 83 5 chr18 35852058 35852274 -50136660 - MIR SINE MIR -12 250 18 274 273 99 33 chr18 35853288 35853409 -50135525 - MIR3 SINE MIR -39 169 41 234 62 0 0 chr18 35853492 35853524 -50135410 + (TC)n Simple_repeat Simple_repeat 1 32 0 21 36 0 0 chr18 35854251 35854279 -50134655 + AT_rich Low_complexity Low_complexity 1 28 0 775 215 12 18 chr18 35856022 35856185 -50132749 + FRAM SINE Alu 1 162 -4 2171 243 92 17 chr18 35856713 35857593 -50131341 + L1ME2 LINE L1 4288 5233 -913 1731 228 194 38 chr18 35857642 35858085 -50130849 + L1ME2 LINE L1 5307 5680 -484 1702 182 11 3 chr18 35858085 35858371 -50130563 + AluJo SINE Alu 1 288 -24 1731 228 194 38 chr18 35858371 35858660 -50130274 + L1ME2 LINE L1 5680 6153 -11 231 292 18 26 chr18 35858714 35858827 -50130107 + L1MEd LINE L1 39 150 -5969 2007 125 0 43 chr18 35858985 35859288 -50129646 + AluSx SINE Alu 1 290 -22 1883 138 21 0 chr18 35859584 35859875 -50129059 + AluSx SINE Alu 1 297 -15 256 294 50 25 chr18 35860270 35860430 -50128504 + L1MEd LINE L1 349 512 -5607 402 273 87 35 chr18 35860679 35860990 -50127944 + L1MEd LINE L1 739 1065 -5054 610 211 127 31 chr18 35861047 35861275 -50127659 - MLT1C LTR MaLR -130 337 88 1475 218 102 9 chr18 35861280 35861703 -50127231 + MLT1C LTR MaLR 6 467 0 717 161 46 35 chr18 35861779 35861953 -50126981 + L1M4 LINE L1 3548 3723 -2423 13725 125 30 23 chr18 35861962 35864341 -50124593 + Tigger1 DNA MER2_type 24 2418 0 2664 208 69 7 chr18 35864341 35865023 -50123911 + L1M4 LINE L1 3722 4445 -1701 1634 322 17 16 chr18 35865030 35865611 -50123323 + L1PA16 LINE L1 790 1371 -6203 569 276 0 37 chr18 35865639 35865885 -50123049 + L1PA16 LINE L1 2086 2298 -5276 6894 60 6 4 chr18 35866586 35868145 -50120789 - L1PA5 LINE L1 -2 6152 4590 15302 205 19 24 chr18 35868262 35870900 -50118034 + L1PA16 LINE L1 2285 4935 -2669 297 0 0 0 chr18 35870900 35870933 -50118001 + (TAA)n Simple_repeat Simple_repeat 1 33 0 15302 205 19 24 chr18 35870933 35872989 -50115945 + L1PA16 LINE L1 4935 6987 -617 2325 111 25 22 chr18 35872989 35873350 -50115584 + THE1B LTR MaLR 1 362 -2 15302 205 19 24 chr18 35873350 35873965 -50114969 + L1PA16 LINE L1 6987 7604 0 2319 205 40 89 chr18 35873967 35874078 -50114856 + L1M4 LINE L1 4430 4545 -1601 3347 166 12 41 chr18 35874078 35874741 -50114193 - MER73 LTR ERVL 0 644 1 2319 205 40 89 chr18 35874741 35874755 -50114179 + L1M4 LINE L1 4545 4558 -1588 2731 144 137 32 chr18 35874755 35875311 -50113623 - LTR18B LTR ERVL 0 614 1 2319 205 40 89 chr18 35875311 35876061 -50112873 + L1M4 LINE L1 4558 5263 -883 1498 195 17 27 chr18 35876062 35876354 -50112580 + AluJo SINE Alu 1 289 -23 212 273 18 18 chr18 35876585 35876640 -50112294 + MIR SINE MIR 7 61 -201 491 278 67 10 chr18 35877104 35877313 -50111621 + L2 LINE L2 2670 2890 -424 345 341 101 0 chr18 35877318 35877497 -50111437 + L1M4 LINE L1 3690 3886 -2260 314 333 0 0 chr18 35877569 35877686 -50111248 + L1M4 LINE L1 4015 4131 -2015 921 298 155 20 chr18 35877802 35878628 -50110306 - L2 LINE L2 -1 3312 2375 479 250 16 48 chr18 35878695 35878883 -50110051 + MLT1D-int LTR MaLR 1186 1367 -4 1582 189 60 68 chr18 35878891 35879395 -50109539 + MLT1D LTR MaLR 5 504 -1 1795 179 70 32 chr18 35879416 35879856 -50109078 + LTR2B LTR ERV1 34 490 0 4598 205 70 76 chr18 35879861 35880946 -50107988 - L1MDa LINE L1 -2282 4258 3169 7462 167 39 22 chr18 35880946 35883103 -50105831 + L1PA13 LINE L1 3987 6163 0 4598 205 70 76 chr18 35883103 35883358 -50105576 - L1MDa LINE L1 -3371 3169 2914 183 100 0 0 chr18 35883358 35883388 -50105546 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1788 169 4 0 chr18 35883390 35883669 -50105265 - AluJb SINE Alu -32 280 1 4598 205 70 76 chr18 35883669 35883773 -50105161 - L1MDa LINE L1 -3627 2913 2810 289 108 0 0 chr18 35883773 35883810 -50105124 + U2 snRNA snRNA 1 37 -151 4598 205 70 76 chr18 35883810 35884310 -50104624 - L1MDa LINE L1 -3730 2810 2309 1462 248 114 61 chr18 35884310 35885013 -50103921 + LTR68 LTR ERV1 1 740 0 4598 205 70 76 chr18 35885013 35885207 -50103727 - L1MDa LINE L1 -4231 2309 2066 1547 187 3 40 chr18 35885207 35885528 -50103406 - AluJb SINE Alu -3 309 1 4598 205 70 76 chr18 35885528 35885580 -50103354 - L1MDa LINE L1 -4474 2066 2015 1482 162 104 16 chr18 35885577 35885737 -50103197 - L1MB8 LINE L1 0 6178 6019 * 2789 178 69 37 chr18 35885737 35886629 -50102305 - L1MD3 LINE L1 -376 5802 5048 6171 105 18 11 chr18 35886629 35887911 -50101023 + L1PA16 LINE L1 4873 6155 -11 2789 178 69 37 chr18 35887911 35888020 -50100914 - L1MD3 LINE L1 -1130 5048 4944 * 4107 188 38 24 chr18 35888006 35888399 -50100535 - L1MDa LINE L1 -4496 2044 1658 1702 138 8 0 chr18 35888399 35888652 -50100282 - AluSx SINE Alu -2 310 56 4107 188 38 24 chr18 35888652 35889218 -50099716 - L1MDa LINE L1 -4882 1658 1072 1291 246 39 28 chr18 35889199 35889257 -50099677 - L1MDa LINE L1 -6174 366 310 * 2723 102 19 16 chr18 35889257 35889631 -50099303 + THE1C LTR MaLR 1 375 0 1291 246 39 28 chr18 35889631 35889737 -50099197 - L1MDa LINE L1 -6230 310 207 333 0 0 0 chr18 35889737 35889774 -50099160 + (CA)n Simple_repeat Simple_repeat 2 38 0 1291 246 39 28 chr18 35889774 35889966 -50098968 - L1MDa LINE L1 -6333 207 5 1762 214 78 45 chr18 35890114 35890599 -50098335 - MLT1D LTR MaLR -4 501 1 257 290 40 30 chr18 35890686 35890786 -50098148 - MIR SINE MIR -78 184 84 242 273 64 27 chr18 35890904 35891014 -50097920 + MIR SINE MIR 20 133 -129 255 103 0 0 chr18 35891132 35891171 -50097763 + (CCCTG)n Simple_repeat Simple_repeat 1 39 0 232 228 0 53 chr18 35891646 35891703 -50097231 - MIR SINE MIR -162 100 47 228 67 0 0 chr18 35891837 35891867 -50097067 + (TGGGGG)n Simple_repeat Simple_repeat 3 32 0 242 307 60 27 chr18 35892054 35892204 -50096730 + MIR3 SINE MIR 35 189 -19 319 163 0 0 chr18 35892255 35892304 -50096630 - L2 LINE L2 0 3313 3265 1356 193 84 11 chr18 35892685 35892984 -50095950 + MER39 LTR ERV1 1 381 -326 * 3489 122 30 66 chr18 35892982 35893591 -50095343 - LTR59 LTR ERV1 -10 587 1 358 187 67 0 chr18 35893592 35893662 -50095272 + MER39 LTR ERV1 384 458 -249 1347 154 23 5 chr18 35893662 35893883 -50095051 - MER41B LTR ERV1 0 635 411 747 128 8 0 chr18 35893881 35893998 -50094936 - MER41B LTR ERV1 -517 118 1 * 1315 117 64 44 chr18 35893998 35894210 -50094724 + MER39 LTR ERV1 455 674 -33 2565 216 126 15 chr18 35894210 35894871 -50094063 - MER50 LTR ERV1 0 734 1 1315 117 64 44 chr18 35894871 35894906 -50094028 + MER39 LTR ERV1 674 707 0 1924 203 41 68 chr18 35894943 35895403 -50093531 - LTR9 LTR ERV1 -69 543 99 2120 126 3 19 chr18 35895403 35895713 -50093221 + AluSx SINE Alu 1 305 -7 1924 203 41 68 chr18 35895713 35895810 -50093124 - LTR9 LTR ERV1 -513 99 1 2862 121 39 26 chr18 35896022 35896654 -50092280 - LTR8A LTR ERV1 0 727 1 361 161 41 8 chr18 35897157 35897233 -50091701 + MER5A DNA MER1_type 36 118 -71 1781 161 86 20 chr18 35897243 35897346 -50091588 - LTR37A LTR ERV1 0 426 331 3080 132 69 4 chr18 35897346 35897822 -50091112 + MER84 LTR ERV1 1 507 0 1781 161 86 20 chr18 35897822 35898115 -50090819 - LTR37A LTR ERV1 -95 331 4 375 271 74 0 chr18 35899470 35899592 -50089342 - L2 LINE L2 -212 3060 2930 310 386 26 16 chr18 35899882 35900071 -50088863 + L1ME LINE L1 466 656 -5874 1165 262 29 15 chr18 35900133 35900476 -50088458 - HERVL40 LTR ERVL -2104 3426 3079 767 284 21 0 chr18 35900527 35900717 -50088217 - HERVL40 LTR ERVL -2623 2907 2714 1482 238 46 55 chr18 35900907 35901275 -50087659 + L1ME LINE L1 2015 2385 -4336 2270 125 0 0 chr18 35901275 35901580 -50087354 + AluSx SINE Alu 1 305 -7 1482 238 46 55 chr18 35901580 35902007 -50086927 + L1ME LINE L1 2385 2846 -3875 3985 141 58 43 chr18 35902020 35902528 -50086406 + L1MA4 LINE L1 4771 5270 -1030 1483 182 14 44 chr18 35902528 35902825 -50086109 + AluJo SINE Alu 3 290 -22 3985 141 58 43 chr18 35902825 35903489 -50085445 + L1MA4 LINE L1 5270 5950 -350 23 97 0 0 chr18 35903849 35903921 -50085013 + AT_rich Low_complexity Low_complexity 1 72 0 22 35 0 0 chr18 35904003 35904032 -50084902 + AT_rich Low_complexity Low_complexity 1 29 0 183 80 0 0 chr18 35904982 35905007 -50083927 + (TG)n Simple_repeat Simple_repeat 2 26 0 28 48 0 0 chr18 35905314 35905356 -50083578 + AT_rich Low_complexity Low_complexity 1 42 0 1224 242 20 0 chr18 35906523 35906816 -50082118 + L1ME LINE L1 2845 3143 -3397 * 1993 136 8 10 chr18 35906812 35907305 -50081629 - L1P4 LINE L1 -699 5469 4980 1059 210 38 0 chr18 35907311 35907549 -50081385 + L1P LINE L1 4802 5048 -1098 1990 141 0 3 chr18 35908697 35908981 -50079953 + AluSx SINE Alu 5 287 -25 712 190 5 123 chr18 35910141 35910273 -50078661 - MLT1A2 LTR MaLR 0 374 274 1383 188 59 19 chr18 35910273 35910588 -50078346 - AluJb SINE Alu 0 327 2 712 190 5 123 chr18 35910588 35910665 -50078269 - MLT1A2 LTR MaLR -100 274 189 22 0 0 0 chr18 35912102 35912124 -50076810 + AT_rich Low_complexity Low_complexity 1 22 0 495 164 0 132 chr18 35912325 35912477 -50076457 - MER96B DNA MER1_type? -283 134 3 340 344 21 36 chr18 35912567 35912759 -50076175 + MIR3 SINE MIR 6 194 -14 24 0 0 0 chr18 35913026 35913050 -50075884 + AT_rich Low_complexity Low_complexity 1 24 0 340 176 59 0 chr18 35913189 35913274 -50075660 + L1MB4 LINE L1 6086 6175 -5 2297 229 91 9 chr18 35913293 35913964 -50074970 + L1M4 LINE L1 2409 3134 -3012 44435 35 11 3 chr18 35913990 35920094 -50068840 + L1PA3 LINE L1 1 6155 0 626 235 57 72 chr18 35920071 35920241 -50068693 + L1M4 LINE L1 3120 3291 -2855 * 2284 131 0 0 chr18 35920241 35920553 -50068381 + AluSx SINE Alu 1 312 0 626 235 57 72 chr18 35920553 35920769 -50068165 + L1M4 LINE L1 3291 3500 -2646 4579 180 50 32 chr18 35920830 35922590 -50066344 - L1MB8 LINE L1 -6 6172 4395 2196 134 0 0 chr18 35922590 35922897 -50066037 - AluSx SINE Alu -5 307 1 4579 180 50 32 chr18 35922897 35923102 -50065832 - L1MB8 LINE L1 -1783 4395 4195 787 231 35 0 chr18 35925105 35925274 -50063660 - MER63 DNA MER1_type -1 1059 885 628 245 88 92 chr18 35925488 35925664 -50063270 - MER34C LTR ERV1 0 787 612 2052 122 58 0 chr18 35925664 35925958 -50062976 - AluSx SINE Alu -1 311 1 628 245 88 92 chr18 35925958 35926338 -50062596 - MER34C LTR ERV1 -175 612 5 1074 280 91 85 chr18 35927825 35928621 -50060313 + L2 LINE L2 2265 3084 -229 3699 140 41 71 chr18 35928621 35929204 -50059730 + LTR8A LTR ERV1 1 559 -168 2078 134 16 0 chr18 35929204 35929510 -50059424 + AluSx SINE Alu 1 311 -1 3699 140 41 71 chr18 35929510 35929675 -50059259 + LTR8A LTR ERV1 559 727 0 1074 280 91 85 chr18 35929675 35929903 -50059031 + L2 LINE L2 3084 3309 -4 1421 223 44 38 chr18 35931631 35932111 -50056823 - L1MC5 LINE L1 -26 7935 7453 283 228 79 55 chr18 35932261 35932463 -50056471 - HAL1 LINE L1 -1811 696 490 1494 229 43 22 chr18 35932533 35933048 -50055886 - MER90 LTR ERV1 0 614 2 240 255 49 98 chr18 35933171 35933355 -50055579 - HAL1 LINE L1 -2298 209 35 228 35 0 0 chr18 35934257 35934286 -50054648 + (TA)n Simple_repeat Simple_repeat 2 30 0 211 195 49 49 chr18 35934579 35934661 -50054273 + L2 LINE L2 3014 3095 -177 920 179 56 5 chr18 35935330 35935525 -50053409 + MIR SINE MIR 22 226 -36 569 303 64 17 chr18 35935547 35935781 -50053153 - MIR SINE MIR -17 245 1 1733 207 55 29 chr18 35935818 35936273 -50052661 + MLT1C LTR MaLR 1 467 0 234 214 36 0 chr18 35937309 35937365 -50051569 - MIR SINE MIR -81 181 124 1539 220 41 24 chr18 35937519 35937970 -50050964 + MER89 LTR ERV1 1 558 -1 499 244 341 19 chr18 35938941 35939188 -50049746 + L2 LINE L2 2907 3073 -240 375 78 0 0 chr18 35939188 35939239 -50049695 + (TA)n Simple_repeat Simple_repeat 1 51 0 499 244 341 19 chr18 35939239 35939299 -50049635 + L2 LINE L2 3073 3313 0 1522 218 31 95 chr18 35939534 35940113 -50048821 + L1MC5 LINE L1 6688 7229 -732 940 269 70 43 chr18 35940304 35940836 -50048098 + L1MC5 LINE L1 7309 7854 -107 590 150 72 42 chr18 35940883 35941050 -50047884 - MER5C DNA MER1_type -25 299 128 1147 148 0 0 chr18 35941107 35941276 -50047658 - FRAM SINE Alu -10 166 1 1965 163 55 13 chr18 35941697 35942078 -50046856 + L1MA6 LINE L1 5900 6296 -4 24 0 0 0 chr18 35942078 35942102 -50046832 + AT_rich Low_complexity Low_complexity 1 24 0 1534 211 7 14 chr18 35942605 35942917 -50046017 - AluJb SINE Alu 0 310 1 442 244 52 0 chr18 35943465 35943580 -50045354 - MER5C DNA MER1_type -200 124 4 1264 220 41 40 chr18 35943610 35944096 -50044838 - MLT1E1 LTR MaLR 0 654 122 985 161 0 0 chr18 35944136 35944291 -50044643 + AluSg/x SINE Alu 136 290 -22 43395 54 3 1 chr18 35944301 35950427 -50038507 + L1PA5 LINE L1 11 6153 -1 386 62 0 0 chr18 35950418 35950483 -50038451 + L1P LINE L1 3249 3313 -2833 * 751 164 42 6 chr18 35950504 35950669 -50038265 - L1M4 LINE L1 -2110 4036 3866 1900 129 29 0 chr18 35950703 35950982 -50037952 - AluSc SINE Alu -21 288 2 2000 123 3 10 chr18 35951283 35951584 -50037350 + AluSg SINE Alu 1 299 -11 202 140 120 20 chr18 35951609 35951659 -50037275 + L2 LINE L2 3214 3268 -4 254 292 53 59 chr18 35951668 35951951 -50036983 + L3 LINE CR1 1094 1437 -140 188 283 107 31 chr18 35953192 35953351 -50035583 - L2 LINE L2 -56 3216 3046 883 199 100 50 chr18 35953480 35953767 -50035167 + MLT2B1 LTR ERVL 118 464 -56 2117 153 40 0 chr18 35953767 35954113 -50034821 - MER47A DNA MER2_type -6 360 1 270 73 0 0 chr18 35954141 35954182 -50034752 + (CA)n Simple_repeat Simple_repeat 2 42 0 1094 161 32 177 chr18 35954189 35954505 -50034429 + Tigger7 DNA MER2_type 1 270 -463 557 176 11 0 chr18 35954505 35954596 -50034338 + Tigger7 DNA MER2_type 2399 2490 -1 387 0 0 0 chr18 35954630 35954673 -50034261 + (CA)n Simple_repeat Simple_repeat 2 44 0 565 177 178 10 chr18 35955856 35956003 -50032931 + L1MB7 LINE L1 5731 5900 -284 314 302 119 8 chr18 35956135 35956261 -50032673 + MIR SINE MIR 53 192 -70 245 234 53 21 chr18 35956295 35956389 -50032545 + MLT1H1 LTR MaLR 17 113 -480 428 227 140 47 chr18 35956467 35956665 -50032269 + MLT1H1 LTR MaLR 246 469 -85 1014 266 137 38 chr18 35956669 35956826 -50032108 - MER90 LTR ERV1 -18 557 417 1935 144 3 26 chr18 35956826 35957138 -50031796 - AluSx SINE Alu -7 305 1 1014 266 137 38 chr18 35957138 35957483 -50031451 - MER90 LTR ERV1 -158 417 5 251 126 64 31 chr18 35957493 35957564 -50031370 + MLT1H1 LTR MaLR 473 565 -2 582 153 0 0 chr18 35959310 35959421 -50029513 + (TGGA)n Simple_repeat Simple_repeat 4 114 0 2658 99 31 6 chr18 35960077 35960432 -50028502 + THE1B LTR MaLR 1 364 0 255 61 0 0 chr18 35962262 35962295 -50026639 + (TG)n Simple_repeat Simple_repeat 1 33 0 210 105 0 0 chr18 35962295 35962333 -50026601 + (CAGA)n Simple_repeat Simple_repeat 2 39 0 1636 175 0 14 chr18 35962334 35962614 -50026320 - AluJo SINE Alu -36 276 1 952 246 75 59 chr18 35962622 35963078 -50025856 - LTR33A LTR ERVL -58 465 3 352 254 99 65 chr18 35963595 35963796 -50025138 + MIR SINE MIR 36 243 -19 410 49 16 0 chr18 35964000 35964061 -50024873 + (CA)n Simple_repeat Simple_repeat 1 62 0 1841 217 154 10 chr18 35964456 35964582 -50024352 + L1MC4 LINE L1 6459 6566 -1476 270 0 0 0 chr18 35964582 35964612 -50024322 + (TG)n Simple_repeat Simple_repeat 2 31 0 1841 217 154 10 chr18 35964612 35964965 -50023969 + L1MC4 LINE L1 6566 7007 -1035 1884 243 79 24 chr18 35964972 35965519 -50023415 - MER90 LTR ERV1 -37 577 1 1466 150 113 0 chr18 35965632 35965925 -50023009 - L1MC2 LINE L1 0 6344 6019 21660 52 8 1 chr18 35965927 35969306 -50019628 + L1PA6 LINE L1 2746 6154 0 1033 179 13 67 chr18 35969327 35969551 -50019383 - AluJo SINE Alu -100 212 1 2588 186 5 0 chr18 35969551 35969998 -50018936 - L1MC2 LINE L1 -369 5975 5527 1254 183 53 4 chr18 35969992 35970254 -50018680 + L1MC3 LINE L1 7504 7778 -7 * 425 268 134 22 chr18 35970273 35970504 -50018430 + L1MC5 LINE L1 7161 7417 -544 1622 153 12 4 chr18 35970580 35970835 -50018099 + AluJo SINE Alu 29 285 -27 1710 103 45 76 chr18 35971032 35971362 -50017572 - MER52C LTR ERV1 0 1278 959 8067 116 8 6 chr18 35971462 35973504 -50015430 + HERVH LTR ERV1 3168 5225 -1866 1378 120 23 5 chr18 35973505 35973721 -50015213 + HERVH LTR ERV1 5600 5819 -1894 2289 114 50 13 chr18 35973721 35974097 -50014837 + HERVH LTR ERV1 7324 7713 0 3035 80 25 20 chr18 35974097 35974535 -50014399 + LTR7 LTR ERV1 1 440 -10 593 82 0 0 chr18 35974545 35974618 -50014316 - AluS SINE Alu -239 74 2 595 204 35 21 chr18 35974632 35974774 -50014160 + LTR38 LTR ERV1 413 556 0 * 1697 118 13 86 chr18 35974774 35975088 -50013846 - MER65A LTR ERV1 -154 291 1 253 290 14 29 chr18 35975122 35975260 -50013674 + LTR37B LTR ERV1 171 306 -162 643 231 138 5 chr18 35976113 35976316 -50012618 - MER89 LTR ERV1 0 559 330 951 217 69 100 chr18 35976320 35976863 -50012071 - PABL_B LTR ERV1 0 667 1 488 206 15 52 chr18 35976864 35977000 -50011934 - MER89 LTR ERV1 -232 327 197 * 591 112 0 0 chr18 35976973 35977062 -50011872 - MER89 LTR ERV1 -470 89 1 2261 131 39 31 chr18 35977289 35977648 -50011286 - THE1B LTR MaLR 0 364 3 2784 86 127 5 chr18 35979149 35979500 -50009434 + MLT2A1 LTR ERVL 3 310 -134 336 48 0 0 chr18 35979500 35979542 -50009392 + (TC)n Simple_repeat Simple_repeat 2 43 0 216 0 0 0 chr18 35979541 35979565 -50009369 + (TA)n Simple_repeat Simple_repeat 1 24 0 * 2784 86 127 5 chr18 35979542 35979607 -50009327 + MLT2A1 LTR ERVL 310 444 0 14768 78 24 2 chr18 35979607 35981504 -50007430 + HERVL-A1 LTR ERVL 1 1940 -3714 1111 158 0 0 chr18 35981604 35981775 -50007159 + AluSg/x SINE Alu 129 299 -13 597 185 19 0 chr18 35981792 35981900 -50007034 + MLT1D LTR MaLR 396 505 0 387 250 125 24 chr18 35981900 35982068 -50006866 + HAL1 LINE L1 2323 2507 0 384 297 29 23 chr18 35982158 35982333 -50006601 + L1M4 LINE L1 3595 3770 -2376 1356 208 61 115 chr18 35982353 35982876 -50006058 - MLT1D LTR MaLR -8 497 3 1034 243 91 116 chr18 35982894 35983498 -50005436 + L1M4 LINE L1 3786 4360 -1786 1635 186 25 4 chr18 35983498 35983778 -50005156 + AluJb SINE Alu 1 286 -26 1034 243 91 116 chr18 35983778 35984116 -50004818 + L1M4 LINE L1 4360 4705 -1441 1143 178 26 0 chr18 35984550 35984780 -50004154 - Charlie2 DNA MER1_type -651 2211 1976 23 54 0 0 chr18 35984844 35984881 -50004053 + AT_rich Low_complexity Low_complexity 1 37 0 290 187 122 29 chr18 35984996 35985135 -50003799 + Charlie2 DNA MER1_type 2390 2541 -321 1283 151 0 39 chr18 35985457 35985693 -50003241 - AluJb SINE Alu 0 313 86 2175 128 0 0 chr18 35985801 35986097 -50002837 + AluSx SINE Alu 3 298 -14 669 188 65 19 chr18 35987342 35987496 -50001438 - MER31B LTR ERV1 0 466 306 * 2694 148 40 0 chr18 35987484 35987910 -50001024 + MER34C LTR ERV1 5 447 -138 2527 202 10 17 chr18 35988030 35988511 -50000423 + LTR31 LTR ERV1 127 604 -15 824 118 37 7 chr18 35988521 35988656 -50000278 + MER34C LTR ERV1 443 581 -4 1736 143 28 56 chr18 35988661 35988982 -49999952 - MER31B LTR ERV1 -142 324 13 4377 117 12 61 chr18 35989164 35989890 -49999044 - LTR8 LTR ERV1 0 691 1 890 122 47 0 chr18 35990021 35990169 -49998765 - MER65A LTR ERV1 0 445 291 704 146 0 0 chr18 35990178 35990281 -49998653 - MER4E LTR ERV1 0 779 677 1234 183 8 63 chr18 35990282 35990550 -49998384 + LTR8 LTR ERV1 1 253 -438 963 448 56 3 chr18 35990552 35990838 -49998096 + AluSx SINE Alu 2 302 0 777 128 0 0 chr18 35990838 35990963 -49997971 + (GA)n Simple_repeat Simple_repeat 2 126 0 1571 188 98 87 chr18 35990990 35991427 -49997507 + LTR8 LTR ERV1 248 689 -2 2768 171 7 62 chr18 35991429 35991991 -49996943 - MER4E LTR ERV1 -100 679 149 1046 221 99 49 chr18 35992124 35992419 -49996515 + LTR10B LTR ERV1 252 547 0 27207 263 37 27 chr18 35992419 36000128 -49988806 + HERVI LTR ERV1 2 7784 -1 944 252 75 43 chr18 36000207 36000556 -49988378 + LTR10B LTR ERV1 188 547 0 591 110 0 0 chr18 36000556 36000636 -49988298 - MER4E LTR ERV1 -622 157 78 1315 161 9 18 chr18 36000638 36000861 -49988073 + LTR8 LTR ERV1 53 273 -418 29293 70 13 1 chr18 36000961 36004587 -49984347 + HERVL-A1 LTR ERVL 1987 5654 0 3271 59 2 5 chr18 36004587 36004992 -49983942 + MLT2A1 LTR ERVL 1 404 -40 360 86 0 35 chr18 36005024 36005082 -49983852 + MLT2A1 LTR ERVL 397 452 -1 464 63 0 0 chr18 36005662 36005725 -49983209 + MER61E LTR ERV1 1 63 -506 1519 176 178 66 chr18 36005879 36006379 -49982555 - MER52C LTR ERV1 -722 556 1 968 262 50 38 chr18 36006655 36007075 -49981859 + HAL1 LINE L1 1216 1640 -867 207 0 0 0 chr18 36007094 36007117 -49981817 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1584 111 5 0 chr18 36007119 36007327 -49981607 + AluSq SINE Alu 87 295 -18 1052 203 177 81 chr18 36007338 36007870 -49981064 - L1MC5 LINE L1 -50 7911 7329 1517 211 142 26 chr18 36007879 36008373 -49980561 + HAL1 LINE L1 1667 2217 -290 2189 117 3 3 chr18 36008519 36008817 -49980117 + AluSq SINE Alu 1 298 -15 1504 192 113 42 chr18 36008834 36009214 -49979720 + MLT1D LTR MaLR 1 407 -98 997 122 0 0 chr18 36009218 36009357 -49979577 + FLAM_C SINE Alu 5 143 0 1944 165 33 41 chr18 36009507 36009935 -49978999 + LTR8 LTR ERV1 307 691 0 540 253 51 74 chr18 36009982 36010239 -49978695 + LTR38 LTR ERV1 149 399 -157 22 0 0 0 chr18 36012082 36012104 -49976830 + AT_rich Low_complexity Low_complexity 1 22 0 1471 119 5 9 chr18 36012107 36012317 -49976617 + AluSp SINE Alu 5 213 -100 7894 94 7 58 chr18 36012418 36013647 -49975287 - HERVH LTR ERV1 -5140 2573 1408 220 355 57 24 chr18 36014072 36014196 -49974738 - L2 LINE L2 -1 3271 3144 1468 153 34 21 chr18 36014491 36014780 -49974154 + LTR19A LTR ERV1 1 407 -79 42470 46 1 2 chr18 36064783 36070719 -49918215 + L1PA4 LINE L1 221 6154 -1 7696 32 0 0 chr18 36073232 36074214 -49914720 - L1PA5 LINE L1 -5 6149 5169 2346 115 0 0 chr18 36075351 36075663 -49913271 - AluSx SINE Alu 0 312 1 181 243 0 0 chr18 36075718 36075755 -49913179 - L2 LINE L2 -43 3229 3193 23 0 0 0 chr18 36076725 36076748 -49912186 + AT_rich Low_complexity Low_complexity 1 23 0 231 170 0 0 chr18 36076834 36076881 -49912053 + G-rich Low_complexity Low_complexity 1 47 0 939 169 7 7 chr18 36076992 36077146 -49911788 + AluJb SINE Alu 146 299 -13 1839 173 0 7 chr18 36077148 36077454 -49911480 + AluJo SINE Alu 1 304 -8 311 343 29 7 chr18 36077518 36077655 -49911279 + MIR SINE MIR 5 144 -118 186 243 0 0 chr18 36077862 36077899 -49911035 - L2 LINE L2 -43 3270 3234 265 312 46 0 chr18 36078051 36078160 -49910774 + MIR SINE MIR 79 192 -70 1802 166 26 49 chr18 36078229 36078573 -49910361 + MLT1A1 LTR MaLR 30 365 0 1146 160 5 11 chr18 36079929 36080116 -49908818 - AluJo SINE Alu -5 307 122 791 178 0 0 chr18 36080151 36080280 -49908654 - AluJo SINE Alu -179 133 5 902 107 23 73 chr18 36080280 36080428 -49908506 + L1MA6 LINE L1 6130 6269 -31 2328 99 0 3 chr18 36080428 36080732 -49908202 - AluSg SINE Alu -7 303 1 902 107 23 73 chr18 36080732 36080760 -49908174 + L1MA6 LINE L1 6269 6297 -3 1275 131 25 34 chr18 36081479 36081716 -49907218 + L1MB7 LINE L1 5022 5256 -890 2207 109 0 19 chr18 36081741 36082054 -49906880 - AluSc SINE Alu -2 307 1 327 194 14 28 chr18 36082055 36082127 -49906807 + Tigger5 DNA MER2_type 2253 2323 0 3166 164 96 28 chr18 36082134 36082946 -49905988 + L1MB7 LINE L1 5244 6168 -16 497 279 84 59 chr18 36084191 36084514 -49904420 - L1MC4 LINE L1 -1013 7029 6699 1832 126 20 40 chr18 36084647 36084948 -49903986 + AluSx SINE Alu 1 295 -17 642 307 55 5 chr18 36084980 36085198 -49903736 + MIR SINE MIR 3 231 -31 2277 124 124 8 chr18 36085379 36085773 -49903161 + MER31B LTR ERV1 27 466 0 2196 113 0 3 chr18 36086067 36086358 -49902576 + AluSx SINE Alu 1 290 -22 747 102 159 3 chr18 36086662 36086805 -49902129 + L1PA10 LINE L1 6007 6166 -8 778 177 22 77 chr18 36086936 36087117 -49901817 - MER5A DNA MER1_type 0 189 19 2469 152 36 23 chr18 36087227 36087702 -49901232 + L1MB3 LINE L1 5660 6140 -43 2091 122 3 3 chr18 36087730 36088025 -49900909 - AluSx SINE Alu -17 295 1 874 219 12 12 chr18 36088861 36089025 -49899909 + FRAM SINE Alu 6 169 -7 448 271 121 24 chr18 36089842 36090008 -49898926 - MIR SINE MIR -48 214 33 4240 164 30 25 chr18 36091367 36092173 -49896761 - L1MD2 LINE L1 -1 6358 5549 1535 154 71 4 chr18 36092211 36092478 -49896456 + AluJb SINE Alu 1 285 -27 315 0 0 0 chr18 36092478 36092513 -49896421 + (CA)n Simple_repeat Simple_repeat 2 36 0 3402 201 99 81 chr18 36092911 36094025 -49894909 + MER69B DNA AcHobo 27 1160 -66 767 205 171 0 chr18 36094319 36094529 -49894405 - MLT1D LTR MaLR -259 246 1 336 193 80 34 chr18 36094535 36094623 -49894311 + MIR3 SINE MIR 76 167 -41 1982 120 30 7 chr18 36094861 36095160 -49893774 - AluSx SINE Alu -6 306 1 2118 258 113 19 chr18 36096043 36097049 -49891885 - L2 LINE L2 0 3313 2196 1186 225 55 26 chr18 36097053 36097400 -49891534 + L1MD1 LINE L1 4805 5161 -985 369 162 0 14 chr18 36097400 36097474 -49891460 - L2 LINE L2 -1111 2203 2131 1438 284 90 31 chr18 36097520 36098197 -49890737 - L2 LINE L2 -1044 2270 1554 679 202 39 28 chr18 36098699 36098877 -49890057 + L1MB8 LINE L1 5957 6136 -42 2247 84 0 0 chr18 36098878 36099152 -49889782 + AluSc SINE Alu 1 274 -35 234 198 171 54 chr18 36100208 36100265 -49888669 + MIR3 SINE MIR 13 62 -146 4871 124 70 8 chr18 36100265 36100999 -49887935 - MER4E LTR ERV1 0 779 1 234 198 171 54 chr18 36100999 36101052 -49887882 + MIR3 SINE MIR 62 136 -72 457 220 110 0 chr18 36102057 36102166 -49886768 + MER63 DNA MER1_type 5 751 -85 374 122 41 0 chr18 36104412 36104510 -49884424 + (CA)n Simple_repeat Simple_repeat 2 103 0 1882 164 0 3 chr18 36104543 36104842 -49884092 - AluJo SINE Alu -10 302 5 234 235 49 37 chr18 36104875 36104956 -49883978 - L2 LINE L2 -2 3270 3189 670 310 107 11 chr18 36105391 36105795 -49883139 + L1MD1 LINE L1 5384 5838 -404 2009 115 20 0 chr18 36105882 36106177 -49882757 - AluSx SINE Alu -11 301 1 1473 62 0 0 chr18 36106803 36106981 -49881953 + AluY SINE Alu 130 307 -4 51 31 0 0 chr18 36107098 36107163 -49881771 + AT_rich Low_complexity Low_complexity 1 65 0 707 208 171 23 chr18 36107163 36107480 -49881454 - L1ME3A LINE L1 -11 6159 5776 1550 190 76 103 chr18 36107480 36108235 -49880699 + LTR1B LTR ERV1 2 826 0 729 234 54 5 chr18 36108235 36108440 -49880494 - L1ME3A LINE L1 -393 5769 5555 21 0 0 0 chr18 36108644 36108665 -49880269 + AT_rich Low_complexity Low_complexity 1 21 0 779 296 51 35 chr18 36108725 36109316 -49879618 + L1M4 LINE L1 4056 4655 -1491 1263 179 7 68 chr18 36109319 36109398 -49879536 + L1MB8 LINE L1 5888 5970 -208 2036 160 0 0 chr18 36109398 36109704 -49879230 + AluSx SINE Alu 1 306 -6 1263 179 7 68 chr18 36109704 36109932 -49879002 + L1MB8 LINE L1 5970 6176 -2 1149 115 13 0 chr18 36110074 36110230 -49878704 + AluSx SINE Alu 11 168 -144 557 298 78 24 chr18 36110330 36110827 -49878107 + L1M4 LINE L1 4682 5205 -941 1732 242 42 104 chr18 36110834 36111388 -49877546 + L1ME LINE L1 476 942 -5588 1800 182 3 0 chr18 36111388 36111679 -49877255 - AluJo SINE Alu -20 292 1 1732 242 42 104 chr18 36111679 36112120 -49876814 + L1ME LINE L1 942 1409 -5121 539 281 44 41 chr18 36112239 36112297 -49876637 + L1ME LINE L1 1705 1761 -4779 1734 201 0 0 chr18 36112297 36112590 -49876344 + AluJb SINE Alu 3 295 -17 539 281 44 41 chr18 36112590 36112826 -49876108 + L1ME LINE L1 1761 2000 -4540 2607 276 116 12 chr18 36112832 36114518 -49874416 + L1M4 LINE L1 3133 5030 -1116 2030 162 14 37 chr18 36114518 36114665 -49874269 + MER44D DNA MER2_type 2 151 -2336 1948 163 0 0 chr18 36114665 36114954 -49873980 - AluJb SINE Alu -23 289 1 2030 162 14 37 chr18 36114954 36115285 -49873649 + MER44D DNA MER2_type 151 491 -114 189 0 0 0 chr18 36115424 36115445 -49873489 + (A)n Simple_repeat Simple_repeat 1 21 0 6558 201 3 21 chr18 36115445 36116871 -49872063 + L1 LINE L1 3742 5142 -1004 240 257 14 0 chr18 36116871 36116941 -49871993 + MER52A LTR ERV1 1 71 -1684 180 158 0 0 chr18 36116942 36116980 -49871954 + (CAG)n Simple_repeat Simple_repeat 2 39 0 6001 181 41 26 chr18 36117417 36118514 -49870420 + MER52A LTR ERV1 643 1755 0 359 127 0 0 chr18 36118514 36118569 -49870365 + L1P LINE L1 5139 5193 -953 2061 138 13 10 chr18 36118570 36118881 -49870053 + AluSx SINE Alu 1 312 0 231 36 0 0 chr18 36119144 36119172 -49869762 + (A)n Simple_repeat Simple_repeat 1 28 0 450 225 93 26 chr18 36119885 36120036 -49868898 - L1ME3 LINE L1 0 6162 6002 284 202 110 37 chr18 36120043 36120152 -49868782 + MER113 DNA MER1_type? 1 117 -404 2207 98 17 0 chr18 36120242 36120538 -49868396 + AluSq SINE Alu 1 301 -12 183 323 31 71 chr18 36121389 36121516 -49867418 + MIR SINE MIR 30 151 -111 549 264 145 31 chr18 36122803 36123030 -49865904 - MIR SINE MIR -3 259 7 1911 202 92 23 chr18 36124016 36124581 -49864353 - L1MCa LINE L1 -4634 1930 1217 755 151 42 0 chr18 36124581 36124700 -49864234 - AluJb SINE Alu -13 299 176 1386 232 85 0 chr18 36124722 36125076 -49863858 - L1MCa LINE L1 -4860 1185 802 689 319 145 15 chr18 36125132 36125602 -49863332 - L3 LINE CR1 -230 1347 817 238 268 70 14 chr18 36125635 36125706 -49863228 - L3 LINE CR1 -741 836 762 982 201 0 0 chr18 36125955 36126124 -49862810 - AluJb SINE Alu -3 309 141 207 0 0 0 chr18 36126166 36126189 -49862745 + (T)n Simple_repeat Simple_repeat 1 23 0 2039 110 0 7 chr18 36126303 36126620 -49862314 + AluSx SINE Alu 6 320 0 406 184 0 0 chr18 36126633 36126709 -49862225 + L1MB7 LINE L1 5799 5874 -310 740 208 29 52 chr18 36126712 36126885 -49862049 + AluJo SINE Alu 6 174 -138 628 111 0 0 chr18 36126885 36126966 -49861968 - AluJ/FLAM SINE Alu -230 82 2 1845 179 3 6 chr18 36127001 36127314 -49861620 + AluJb SINE Alu 1 312 0 294 73 0 0 chr18 36127489 36127530 -49861404 + (A)n Simple_repeat Simple_repeat 1 41 0 2081 142 3 0 chr18 36127713 36128008 -49860926 - AluSx SINE Alu -16 296 1 440 256 8 24 chr18 36128123 36128248 -49860686 + MER110-int LTR ERV1 4183 4305 -342 625 299 11 26 chr18 36128523 36128877 -49860057 + MER90 LTR ERV1 42 430 -145 469 253 47 40 chr18 36129056 36129206 -49859728 + MER90 LTR ERV1 417 567 -8 1840 167 0 0 chr18 36129232 36129519 -49859415 - AluJo SINE Alu -25 287 1 1772 169 3 13 chr18 36129629 36129937 -49858997 - AluJb SINE Alu -2 310 6 2092 131 0 3 chr18 36130310 36130601 -49858333 + AluSx SINE Alu 13 302 -10 1604 159 130 0 chr18 36130644 36130973 -49857961 + Tigger3b DNA MER2_type 6 377 -854 755 270 25 24 chr18 36131083 36131374 -49857560 + MER101 LTR ERV1 222 459 -15 1097 117 37 0 chr18 36131395 36131557 -49857377 + Tigger3b DNA MER2_type 375 542 -690 421 47 31 0 chr18 36131557 36131621 -49857313 + (TTTA)n Simple_repeat Simple_repeat 3 68 0 6159 77 20 1 chr18 36131621 36132403 -49856531 - SVA Other Other -23 1363 567 2397 80 10 0 chr18 36132546 36132846 -49856088 - AluSp SINE Alu -10 303 1 2100 217 37 34 chr18 36132846 36133412 -49855522 + L1M4 LINE L1 3723 4290 -1856 2024 88 0 15 chr18 36133419 36133682 -49855252 - AluSx SINE Alu -49 263 5 378 193 84 50 chr18 36133727 36133834 -49855100 - Charlie1 DNA MER1_type -1122 1639 1529 419 227 0 62 chr18 36133834 36133931 -49855003 - Tigger2a DNA MER2_type 0 444 354 239 217 188 0 chr18 36133932 36134001 -49854933 - Tigger2a DNA MER2_type -333 101 20 2879 153 25 21 chr18 36134002 36134531 -49854403 - L1MB3 LINE L1 -234 5949 5419 936 144 135 10 chr18 36134528 36134736 -49854198 + L1MB3 LINE L1 5950 6183 0 * 594 184 20 0 chr18 36134737 36134835 -49854099 - AluJb SINE Alu -31 281 182 324 210 111 12 chr18 36134859 36134940 -49853994 - Charlie1 DNA MER1_type -1232 1529 1441 615 179 57 18 chr18 36134960 36135142 -49853792 + L1M4 LINE L1 5228 5415 -743 1100 140 0 50 chr18 36135142 36135321 -49853613 - AluJb SINE Alu -137 175 6 210 71 0 0 chr18 36135330 36135358 -49853576 + (T)n Simple_repeat Simple_repeat 1 28 0 275 165 71 71 chr18 36135358 36135434 -49853500 - Charlie1a DNA MER1_type -1157 298 223 491 242 0 0 chr18 36135434 36135525 -49853409 - Tigger2a DNA MER2_type 0 444 354 376 193 148 0 chr18 36135526 36135614 -49853320 - Tigger2a DNA MER2_type -333 101 1 726 251 49 49 chr18 36135614 36135837 -49853097 - Charlie1a DNA MER1_type -1232 223 1 196 239 43 0 chr18 36136073 36136119 -49852815 - L2 LINE L2 -4 3309 3262 2819 186 218 17 chr18 36136232 36137082 -49851852 + L1M4 LINE L1 1123 2142 -4242 2008 125 0 4 chr18 36137102 36137381 -49851553 - AluSg SINE Alu -32 278 1 36 40 0 0 chr18 36137407 36137457 -49851477 + AT_rich Low_complexity Low_complexity 1 50 0 2702 200 45 13 chr18 36137648 36138203 -49850731 - L1MB5 LINE L1 0 6174 5602 2047 109 7 7 chr18 36138691 36139001 -49849933 + AluSx SINE Alu 1 310 0 1749 197 26 119 chr18 36139037 36139606 -49849328 - MLT2B1 LTR ERVL -4 516 1 305 265 118 67 chr18 36140127 36140440 -49848494 + L1MC/D LINE L1 4588 4916 -1230 21 0 0 0 chr18 36140529 36140550 -49848384 + AT_rich Low_complexity Low_complexity 1 21 0 289 242 44 0 chr18 36140556 36140647 -49848287 + L1MC/D LINE L1 5712 5806 -2002 2335 103 0 3 chr18 36140769 36141070 -49847864 - AluSx SINE Alu -12 300 1 844 139 0 0 chr18 36141429 36141558 -49847376 + FLAM_C SINE Alu 15 143 0 882 187 20 0 chr18 36141685 36141835 -49847099 + FRAM SINE Alu 5 157 -9 620 154 46 63 chr18 36141836 36142011 -49846923 + L1MDa LINE L1 1021 1192 -5348 1081 154 69 27 chr18 36142011 36142231 -49846703 + AluJo SINE Alu 87 314 0 2384 241 39 22 chr18 36142276 36143047 -49845887 + L1M4 LINE L1 3182 3965 -2417 180 0 0 0 chr18 36143055 36143075 -49845859 + (T)n Simple_repeat Simple_repeat 1 20 0 22 0 0 0 chr18 36143206 36143228 -49845706 + AT_rich Low_complexity Low_complexity 1 22 0 842 188 80 0 chr18 36143228 36143404 -49845530 + AluJb SINE Alu 120 309 -3 204 40 0 0 chr18 36143417 36143442 -49845492 + (CA)n Simple_repeat Simple_repeat 1 25 0 1932 143 7 19 chr18 36143489 36143797 -49845137 + AluJb SINE Alu 3 306 -6 200 380 144 19 chr18 36143986 36144194 -49844740 + L2 LINE L2 3038 3271 -1 1836 148 3 14 chr18 36144217 36144508 -49844426 - AluJb SINE Alu -24 288 1 1623 176 60 95 chr18 36144889 36145187 -49843747 + Charlie1b DNA MER1_type 20 327 -2434 635 153 17 8 chr18 36145187 36145305 -49843629 + L1MA6 LINE L1 6172 6290 -10 1623 176 60 95 chr18 36145305 36145321 -49843613 + Charlie1b DNA MER1_type 327 342 -2419 1790 148 54 0 chr18 36145321 36145599 -49843335 - AluSx SINE Alu -19 293 1 1623 176 60 95 chr18 36145599 36145799 -49843135 + Charlie1b DNA MER1_type 342 517 -6 505 230 73 0 chr18 36145843 36146047 -49842887 + L1MC5 LINE L1 7452 7670 -291 2400 75 0 10 chr18 36146311 36146616 -49842318 + AluY SINE Alu 1 302 -9 893 146 0 8 chr18 36147009 36147139 -49841795 + FLAM_A SINE Alu 1 129 -4 205 211 33 100 chr18 36147379 36147469 -49841465 + L2 LINE L2 3162 3245 -68 1424 158 105 0 chr18 36147835 36148185 -49840749 + L1M4 LINE L1 5171 5551 -627 2915 6 0 0 chr18 36148197 36148509 -49840425 + AluYb8 SINE Alu 1 312 -6 1989 178 90 0 chr18 36148658 36149023 -49839911 - MSTB LTR MaLR -28 398 1 246 241 55 90 chr18 36149685 36149830 -49839104 + MLT1K LTR MaLR 81 220 -368 1511 167 0 4 chr18 36150460 36150694 -49838240 + MER46A DNA MER2_type 1 233 -3 494 279 97 13 chr18 36151347 36151501 -49837433 - MIR SINE MIR -74 188 22 255 221 77 67 chr18 36151810 36151914 -49837020 + LTR16C LTR ERVL 385 489 -2 1488 210 188 16 chr18 36152857 36153305 -49835629 - LTR50 LTR ERVL -270 525 1 324 0 0 0 chr18 36154004 36154040 -49834894 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2150 100 0 14 chr18 36154043 36154333 -49834601 - AluSg SINE Alu -24 286 1 2172 116 0 35 chr18 36154493 36154811 -49834123 + AluSx SINE Alu 1 307 -5 338 128 43 0 chr18 36156202 36156296 -49832638 + (CA)n Simple_repeat Simple_repeat 2 99 0 1857 168 0 3 chr18 36156329 36156627 -49832307 - AluJo SINE Alu -11 301 5 234 235 49 37 chr18 36156660 36156741 -49832193 - L2 LINE L2 -2 3270 3189 762 269 123 47 chr18 36157176 36157580 -49831354 + L1ME LINE L1 5384 5838 -324 2336 110 0 0 chr18 36157667 36157967 -49830967 - AluSx SINE Alu -12 300 1 871 219 12 12 chr18 36158803 36158967 -49829967 + FRAM SINE Alu 6 169 -7 448 271 121 24 chr18 36159784 36159950 -49828984 - MIR SINE MIR -48 214 33 272 305 188 8 chr18 36160693 36160821 -49828113 - MLT1H LTR MaLR -103 452 302 1542 167 32 0 chr18 36160874 36161120 -49827814 + AluJb SINE Alu 1 254 -58 572 206 66 92 chr18 36161137 36161354 -49827580 - MLT1H LTR MaLR -278 271 1 748 259 23 72 chr18 36161391 36161654 -49827280 + MLT1J LTR MaLR 231 480 -31 2253 90 0 7 chr18 36162234 36162523 -49826411 - AluSc SINE Alu -22 287 1 790 72 0 0 chr18 36162953 36163050 -49825884 + AluSg/x SINE Alu 198 294 -18 310 274 206 58 chr18 36163775 36164052 -49824882 + L1MB2 LINE L1 1089 1406 -5443 972 138 0 72 chr18 36164727 36164894 -49824040 + AluSx SINE Alu 1 155 -157 215 31 31 0 chr18 36164924 36164956 -49823978 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 343 278 78 62 chr18 36164956 36165207 -49823727 + L1ME2 LINE L1 65 326 -5744 2136 118 7 3 chr18 36165207 36165511 -49823423 + AluSx SINE Alu 1 305 -7 343 278 78 62 chr18 36165511 36165553 -49823381 + L1ME2 LINE L1 326 366 -5704 2178 199 134 42 chr18 36165564 36166132 -49822802 - MLT1E2 LTR MaLR -4 622 3 879 118 47 0 chr18 36166193 36166320 -49822614 + AluSq/x SINE Alu 1 133 -180 2063 133 0 3 chr18 36166324 36166624 -49822310 + AluSx SINE Alu 1 299 -13 4592 170 10 30 chr18 36166625 36167290 -49821644 + L1MB2 LINE L1 2841 3518 -3355 1647 111 161 19 chr18 36167290 36167551 -49821383 + AluSx SINE Alu 2 299 -3 4592 170 10 30 chr18 36167551 36167885 -49821049 + L1MB2 LINE L1 3518 6856 -17 830 226 48 41 chr18 36167941 36168255 -49820679 + L1ME2 LINE L1 2249 2564 -3516 731 213 82 16 chr18 36168273 36168305 -49820629 + MER58B DNA MER1_type 146 174 -2246 2313 97 0 0 chr18 36168305 36168595 -49820339 + AluSg SINE Alu 1 290 -20 731 213 82 16 chr18 36168595 36168745 -49820189 + MER58B DNA MER1_type 174 340 -1 2521 232 29 0 chr18 36168745 36169401 -49819533 + L1ME2 LINE L1 2554 3228 -2852 277 250 24 32 chr18 36169395 36169519 -49819415 - L1MDa LINE L1 -4019 2521 2399 * 30 45 0 0 chr18 36169521 36169565 -49819369 + AT_rich Low_complexity Low_complexity 1 44 0 3775 214 73 40 chr18 36169565 36170393 -49818541 - L1MDa LINE L1 -4115 2425 1541 1930 135 18 0 chr18 36170393 36170674 -49818260 - AluSx SINE Alu -26 286 1 3775 214 73 40 chr18 36170674 36171079 -49817855 - L1MDa LINE L1 -4999 1541 1151 894 240 74 50 chr18 36171078 36171415 -49817519 + L1ME2 LINE L1 3786 4130 -1950 * 780 187 18 3 chr18 36171415 36171699 -49817235 + GA-rich Low_complexity Low_complexity 1 288 0 2988 202 114 73 chr18 36171704 36172382 -49816552 + L1ME2 LINE L1 4086 4734 -1362 2239 55 44 0 chr18 36172382 36172655 -49816279 + AluYa5 SINE Alu 12 296 -15 2988 202 114 73 chr18 36172655 36173263 -49815671 + L1ME2 LINE L1 4734 5423 -673 1101 158 0 0 chr18 36173264 36173435 -49815499 + AluJb SINE Alu 134 304 -8 2250 201 29 87 chr18 36173438 36174155 -49814779 + L1ME2 LINE L1 5413 6088 -10 369 241 21 55 chr18 36174185 36174330 -49814604 + L1MC5 LINE L1 7790 7929 -32 695 215 80 88 chr18 36174358 36174511 -49814423 - L1MC5 LINE L1 -117 7844 7691 1583 198 7 3 chr18 36174511 36174799 -49814135 + AluJo SINE Alu 1 289 -23 695 215 80 88 chr18 36174799 36174812 -49814122 - L1MC5 LINE L1 -270 7691 7679 207 0 0 0 chr18 36174812 36174835 -49814099 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 695 215 80 88 chr18 36174835 36175006 -49813928 - L1MC5 LINE L1 -282 7679 7509 1701 186 0 24 chr18 36175022 36175312 -49813622 - AluJb SINE Alu -27 285 3 186 43 0 0 chr18 36175438 36175461 -49813473 + (TA)n Simple_repeat Simple_repeat 1 23 0 2689 49 0 0 chr18 36175623 36175930 -49813004 - AluY SINE Alu -4 307 1 17198 171 34 8 chr18 36175930 36180286 -49808648 - L1PBa LINE L1 -2390 4472 3 690 143 109 0 chr18 36180295 36180442 -49808492 - Tigger3(Golem) DNA MER2_type -539 2490 2328 5682 59 20 62 chr18 36180448 36181293 -49807641 + SVA Other Other 1 810 -576 828 110 102 0 chr18 36181404 36181531 -49807403 - FLAM_C SINE Alu -1 142 3 1877 164 7 0 chr18 36181662 36181955 -49806979 - AluJo SINE Alu -17 295 1 1574 137 0 0 chr18 36182103 36182330 -49806604 + AluSg/x SINE Alu 79 305 -5 2451 76 0 0 chr18 36182422 36182726 -49806208 + AluY SINE Alu 1 304 -7 350 248 106 14 chr18 36182757 36182898 -49806036 + L1ME4a LINE L1 5964 6117 -4 449 247 73 13 chr18 36183396 36183546 -49805388 + MIR SINE MIR 104 262 0 1480 160 37 57 chr18 36183598 36183898 -49805036 - AluJo SINE Alu -18 294 1 225 204 0 19 chr18 36184401 36184455 -49804479 + T-rich Low_complexity Low_complexity 3 55 0 351 345 62 7 chr18 36184575 36184720 -49804214 + Tigger8 DNA MER2_type 29 181 -485 2428 76 0 0 chr18 36185060 36185361 -49803573 + AluSg SINE Alu 1 301 -9 490 254 67 8 chr18 36185369 36185503 -49803431 + FLAM_A SINE Alu 1 142 0 1643 191 11 4 chr18 36185698 36185975 -49802959 + AluJo SINE Alu 1 279 -33 1056 174 42 0 chr18 36187094 36187284 -49801650 + MER3 DNA MER1_type 12 209 0 1710 156 0 87 chr18 36187588 36187922 -49801012 + AluJo SINE Alu 1 305 -7 778 270 109 0 chr18 36188529 36188740 -49800194 - MIR SINE MIR -22 240 7 31 26 0 0 chr18 36188836 36188874 -49800060 + AT_rich Low_complexity Low_complexity 1 38 0 947 238 26 35 chr18 36189231 36189458 -49799476 + Tigger7 DNA MER2_type 5 229 -321 1829 167 118 47 chr18 36189489 36190078 -49798856 + Tigger3b DNA MER2_type 1 1228 -3 444 209 0 12 chr18 36190088 36190174 -49798760 + Tigger7 DNA MER2_type 2403 2487 0 23 33 0 0 chr18 36191096 36191126 -49797808 + AT_rich Low_complexity Low_complexity 1 30 0 211 299 0 0 chr18 36191450 36191517 -49797417 + (TA)n Simple_repeat Simple_repeat 2 68 0 255 330 85 75 chr18 36191593 36191781 -49797153 + L3 LINE CR1 1368 1557 -20 1944 157 29 34 chr18 36191793 36191859 -49797075 + L1M3 LINE L1 5256 5321 -834 2391 54 0 17 chr18 36191859 36192179 -49796755 + AluY SINE Alu 1 311 0 1944 157 29 34 chr18 36192179 36192548 -49796386 + L1M3 LINE L1 5321 5692 -463 402 147 0 0 chr18 36192548 36192616 -49796318 + (CA)n Simple_repeat Simple_repeat 2 69 0 2128 112 3 7 chr18 36192833 36193138 -49795796 - AluSx SINE Alu -8 304 1 1330 174 9 104 chr18 36193167 36193495 -49795439 + AluJo SINE Alu 1 297 -15 2897 155 48 22 chr18 36193516 36194323 -49794611 + L1MB5 LINE L1 5258 6153 -21 1049 147 26 52 chr18 36194440 36194533 -49794401 - L1MC5 LINE L1 -491 7470 7376 2333 113 17 46 chr18 36194533 36194878 -49794056 + MER1B DNA MER1_type 2 336 -1 1049 147 26 52 chr18 36194878 36195015 -49793919 - L1MC5 LINE L1 -585 7376 7246 189 107 0 0 chr18 36195505 36195533 -49793401 + (A)n Simple_repeat Simple_repeat 1 28 0 469 266 69 23 chr18 36195550 36195723 -49793211 + MLT1J LTR MaLR 239 419 -92 401 165 18 18 chr18 36195728 36195837 -49793097 + CT-rich Low_complexity Low_complexity 3 111 0 2203 110 3 3 chr18 36195843 36196142 -49792792 - AluSp SINE Alu -14 299 1 2236 58 0 28 chr18 36196418 36196759 -49792175 + AluY SINE Alu 1 333 0 237 98 0 0 chr18 36196778 36196819 -49792115 + (A)n Simple_repeat Simple_repeat 1 41 0 429 224 80 24 chr18 36196839 36196964 -49791970 + L1MC5 LINE L1 7782 7913 -48 2175 124 3 0 chr18 36197651 36198056 -49790878 - AluSx SINE Alu 0 406 1 639 167 123 0 chr18 36198092 36198206 -49790728 + FLAM_A SINE Alu 1 128 -5 337 290 56 19 chr18 36198534 36198641 -49790293 - MIR3 SINE MIR -51 157 47 359 295 87 25 chr18 36198936 36199098 -49789836 + MIR SINE MIR 3 171 -62 445 289 157 45 chr18 36199117 36199656 -49789278 - L2 LINE L2 0 3313 2836 1765 177 0 3 chr18 36199656 36199956 -49788978 - AluJb SINE Alu -13 299 1 445 289 157 45 chr18 36199956 36200004 -49788930 - L2 LINE L2 -477 2836 2795 2967 163 65 93 chr18 36200004 36200245 -49788689 - LTR8 LTR ERV1 0 691 445 2001 122 39 7 chr18 36200245 36200531 -49788403 + AluSx SINE Alu 1 295 -17 2967 163 65 93 chr18 36200531 36201000 -49787934 - LTR8 LTR ERV1 -246 445 1 445 289 157 45 chr18 36201000 36201179 -49787755 - L2 LINE L2 -518 2795 2474 2757 95 62 5 chr18 36201180 36201569 -49787365 + MER9 LTR ERVK 69 479 -32 458 181 19 19 chr18 36201705 36201810 -49787124 + MIR SINE MIR 158 262 0 2186 121 0 0 chr18 36201983 36202281 -49786653 + AluSc SINE Alu 1 298 -11 290 299 110 8 chr18 36202603 36202730 -49786204 + L1MC/D LINE L1 5519 5658 -2150 25 0 0 0 chr18 36202806 36202831 -49786103 + AT_rich Low_complexity Low_complexity 1 25 0 2280 205 110 32 chr18 36204223 36204808 -49784126 + L2 LINE L2 1917 2558 -756 1828 98 4 8 chr18 36204808 36205062 -49783872 + AluSx SINE Alu 1 253 -59 2280 205 110 32 chr18 36205062 36205124 -49783810 + L2 LINE L2 2558 2614 -700 744 239 281 28 chr18 36205125 36205565 -49783369 + L2 LINE L2 2770 3309 -4 196 311 89 0 chr18 36205615 36205660 -49783274 + L2 LINE L2 3238 3286 -27 284 189 81 40 chr18 36205769 36205843 -49783091 - L2 LINE L2 -744 2570 2494 279 311 56 0 chr18 36206723 36206813 -49782121 - L2 LINE L2 -1 3312 3218 214 74 0 0 chr18 36207229 36207256 -49781678 - L2 LINE L2 -98 3215 3189 252 0 0 0 chr18 36207308 36207336 -49781598 + (T)n Simple_repeat Simple_repeat 1 28 0 180 0 0 0 chr18 36207363 36207383 -49781551 + (G)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr18 36207384 36207412 -49781522 + GC_rich Low_complexity Low_complexity 1 28 0 1489 61 0 0 chr18 36207543 36207723 -49781211 - AluY SINE Alu -2 309 130 2006 111 21 0 chr18 36208349 36208638 -49780296 + AluSx SINE Alu 1 295 -17 180 316 145 17 chr18 36208638 36208747 -49780187 + L2 LINE L2 3167 3293 -20 2069 95 32 3 chr18 36209742 36210026 -49778908 + AluSg SINE Alu 1 292 -18 191 152 130 0 chr18 36210571 36210617 -49778317 + MIR SINE MIR 156 207 -55 198 192 0 0 chr18 36210627 36210679 -49778255 + (TA)n Simple_repeat Simple_repeat 2 53 0 2897 145 124 2 chr18 36210979 36211537 -49777397 + L1MA7 LINE L1 5514 6139 -152 225 0 0 0 chr18 36211543 36211568 -49777366 + (T)n Simple_repeat Simple_repeat 1 25 0 1146 160 5 11 chr18 36211753 36211940 -49776994 - AluJo SINE Alu -5 307 122 847 178 0 0 chr18 36211975 36212104 -49776830 - AluJo SINE Alu -179 133 5 951 107 23 73 chr18 36212104 36212252 -49776682 + L1MA6 LINE L1 6130 6269 -31 2317 99 0 3 chr18 36212252 36212556 -49776378 - AluSg SINE Alu -7 303 1 951 107 23 73 chr18 36212556 36212584 -49776350 + L1MA6 LINE L1 6269 6297 -3 201 259 161 0 chr18 36212975 36213056 -49775878 + L2 LINE L2 3146 3239 -33 1286 131 25 34 chr18 36213303 36213540 -49775394 + L1MB7 LINE L1 5022 5256 -890 2180 112 0 19 chr18 36213565 36213878 -49775056 - AluSc SINE Alu -2 307 1 332 194 14 28 chr18 36213879 36213951 -49774983 + Tigger5 DNA MER2_type 2253 2323 0 3188 168 101 28 chr18 36213958 36214770 -49774164 + L1MB7 LINE L1 5244 6168 -16 501 279 84 59 chr18 36216015 36216338 -49772596 - L1MC4 LINE L1 -1013 7029 6699 1842 123 20 40 chr18 36216471 36216772 -49772162 + AluSx SINE Alu 1 295 -17 642 307 55 5 chr18 36216804 36217022 -49771912 + MIR SINE MIR 3 231 -31 2270 124 124 8 chr18 36217203 36217597 -49771337 + MER31B LTR ERV1 27 466 0 2196 113 0 3 chr18 36217891 36218182 -49770752 + AluSx SINE Alu 1 290 -22 747 102 159 3 chr18 36218486 36218629 -49770305 + L1PA10 LINE L1 6007 6166 -8 778 177 22 77 chr18 36218760 36218941 -49769993 - MER5A DNA MER1_type 0 189 19 2469 152 36 23 chr18 36219051 36219526 -49769408 + L1MB3 LINE L1 5660 6140 -43 2379 72 3 3 chr18 36219554 36219846 -49769088 - AluSp SINE Alu -17 296 5 364 296 193 27 chr18 36220057 36220280 -49768654 + MIR SINE MIR 3 262 0 492 271 8 8 chr18 36220317 36220439 -49768495 + MER5A DNA MER1_type 4 125 -64 914 181 36 57 chr18 36220920 36221068 -49767866 + MER5A DNA MER1_type 1 146 -43 1160 122 206 0 chr18 36221068 36221257 -49767677 + MER30 DNA MER1_type 1 228 -2 914 181 36 57 chr18 36221257 36221301 -49767633 + MER5A DNA MER1_type 146 189 0 280 219 94 10 chr18 36225161 36225257 -49763677 + Charlie4 DNA MER1_type 6 109 -1852 1274 291 59 22 chr18 36225257 36225796 -49763138 + L1M4b LINE L1 160 718 -6141 279 296 216 20 chr18 36226076 36226377 -49762557 - L2 LINE L2 -778 2536 2177 2394 92 0 13 chr18 36226867 36227182 -49761752 - AluSp SINE Alu -2 311 1 240 295 0 0 chr18 36227274 36227335 -49761599 + MLT1F1 LTR MaLR 64 124 -443 3076 149 72 2 chr18 36227336 36227888 -49761046 + L1MC3 LINE L1 7189 7779 -6 290 244 111 11 chr18 36227932 36228022 -49760912 - MIR SINE MIR -47 215 117 279 196 0 0 chr18 36228039 36228090 -49760844 + U5 snRNA snRNA 1 51 -65 1863 161 13 13 chr18 36228310 36228621 -49760313 + AluJb SINE Alu 1 311 -1 1940 118 41 0 chr18 36228870 36229141 -49759793 - AluSx SINE Alu -30 282 1 2433 154 58 17 chr18 36229141 36229608 -49759326 + L1MB2 LINE L1 5673 6158 -13 2363 102 0 0 chr18 36229859 36230162 -49758772 - AluSp SINE Alu -10 303 1 1723 136 36 18 chr18 36230664 36230944 -49757990 + AluJb SINE Alu 2 286 -26 2491 60 0 0 chr18 36231913 36232212 -49756722 - AluY SINE Alu -12 299 1 455 296 99 77 chr18 36232233 36232742 -49756192 - L2 LINE L2 0 3313 2718 2548 66 0 0 chr18 36232742 36233046 -49755888 - AluY SINE Alu -7 304 1 455 296 99 77 chr18 36233046 36233203 -49755731 - L2 LINE L2 -595 2718 2566 302 241 130 0 chr18 36233264 36233372 -49755562 + HAL1 LINE L1 22 143 -2364 2097 122 0 0 chr18 36233397 36233685 -49755249 + AluSx SINE Alu 1 288 -24 969 185 87 20 chr18 36234273 36234468 -49754466 + AluJo SINE Alu 87 294 -18 10240 136 94 24 chr18 36234820 36235356 -49753578 + Tigger1 DNA MER2_type 1 498 -1920 1665 183 7 7 chr18 36235356 36235645 -49753289 + AluJb SINE Alu 1 289 -23 10240 136 94 24 chr18 36235645 36236320 -49752614 + Tigger1 DNA MER2_type 498 1124 -1294 1647 207 10 0 chr18 36236320 36236620 -49752314 + AluJo SINE Alu 1 303 -9 10240 136 94 24 chr18 36236620 36237593 -49751341 + Tigger1 DNA MER2_type 1124 2329 -89 1938 128 0 31 chr18 36237806 36238095 -49750839 - AluSx SINE Alu -32 280 1 763 198 146 16 chr18 36238793 36238985 -49749949 + MIR SINE MIR 15 231 -31 251 205 167 39 chr18 36241122 36241200 -49747734 - L2 LINE L2 -48 3224 3137 180 0 0 0 chr18 36243264 36243284 -49745650 + (A)n Simple_repeat Simple_repeat 1 20 0 2525 48 0 3 chr18 36243450 36243745 -49745189 - AluY SINE Alu -17 294 1 2155 116 7 0 chr18 36243842 36244134 -49744800 + AluSx SINE Alu 1 294 -18 219 69 0 0 chr18 36244739 36244768 -49744166 + (A)n Simple_repeat Simple_repeat 1 29 0 653 326 126 25 chr18 36245292 36245971 -49742963 + L2 LINE L2 2546 3305 -8 645 341 37 28 chr18 36246324 36246661 -49742273 - L2 LINE L2 -819 2495 2153 2365 107 7 0 chr18 36246661 36246969 -49741965 + AluSg SINE Alu 1 310 0 645 341 37 28 chr18 36246969 36246983 -49741951 - L2 LINE L2 -1161 2153 2141 232 384 12 0 chr18 36247137 36247223 -49741711 - L2 LINE L2 -682 2632 2546 219 69 0 0 chr18 36247747 36247776 -49741158 + (T)n Simple_repeat Simple_repeat 1 29 0 2041 137 7 0 chr18 36248380 36248672 -49740262 - AluSx SINE Alu -18 294 1 763 198 146 16 chr18 36249370 36249562 -49739372 + MIR SINE MIR 15 231 -31 224 203 165 51 chr18 36251694 36251773 -49737161 - L2 LINE L2 -48 3224 3137 21 0 0 0 chr18 36251951 36251972 -49736962 + GC_rich Low_complexity Low_complexity 1 21 0 222 37 0 0 chr18 36251983 36252010 -49736924 + (A)n Simple_repeat Simple_repeat 1 27 0 399 268 183 36 chr18 36253990 36254214 -49734720 - MIR SINE MIR -3 259 3 1808 176 88 14 chr18 36254293 36254772 -49734162 + L1MB2 LINE L1 5651 6180 0 1710 138 91 4 chr18 36254779 36255055 -49733879 - AluJb SINE Alu -12 300 1 22 56 0 0 chr18 36255127 36255163 -49733771 + AT_rich Low_complexity Low_complexity 1 36 0 191 303 0 76 chr18 36255644 36255710 -49733224 - L2 LINE L2 -1 3271 3211 2352 127 36 3 chr18 36255873 36256236 -49732698 + THE1C LTR MaLR 1 375 0 9667 117 38 38 chr18 36256236 36257816 -49731118 + THE1C-int LTR MaLR 1 1580 0 479 114 25 13 chr18 36257816 36257895 -49731039 + THE1C LTR MaLR 1 80 -348 749 122 41 0 chr18 36257896 36258019 -49730915 + THE1C LTR MaLR 248 375 0 270 253 0 0 chr18 36258529 36258612 -49730322 + (CA)n Simple_repeat Simple_repeat 2 84 0 202 348 14 0 chr18 36258913 36258982 -49729952 - L2 LINE L2 0 3272 3203 24 67 0 0 chr18 36259859 36259904 -49729030 + AT_rich Low_complexity Low_complexity 1 45 0 213 292 60 107 chr18 36260813 36261029 -49727905 + L2 LINE L2 2977 3182 -90 531 253 158 72 chr18 36261398 36261817 -49727117 + L1MC5 LINE L1 5421 5875 -1933 384 211 123 26 chr18 36262393 36262507 -49726427 - MIR SINE MIR -16 246 122 2019 146 78 12 chr18 36262516 36262928 -49726006 - Tigger2 DNA MER2_type 0 2718 2280 399 174 0 0 chr18 36262926 36262995 -49725939 - Tigger2 DNA MER2_type -2649 69 1 * 261 227 110 104 chr18 36263021 36263087 -49725847 + L1MC5 LINE L1 6675 6739 -1222 2195 122 0 0 chr18 36263087 36263398 -49725536 + AluSx SINE Alu 1 311 -1 261 227 110 104 chr18 36263398 36263639 -49725295 + L1MC5 LINE L1 6739 6977 -984 2137 130 0 0 chr18 36263639 36263932 -49725002 + AluSx SINE Alu 1 293 -19 261 227 110 104 chr18 36263932 36264064 -49724870 + L1MC5 LINE L1 6977 7121 -840 699 253 69 6 chr18 36264064 36264238 -49724696 - MER5A DNA MER1_type -4 185 1 261 227 110 104 chr18 36264238 36264267 -49724667 + L1MC5 LINE L1 7121 7148 -813 233 232 32 32 chr18 36264298 36264393 -49724541 + L1MC5 LINE L1 7126 7220 -741 323 305 126 25 chr18 36264470 36264755 -49724179 + L1MC5 LINE L1 7384 7697 -264 1020 276 64 23 chr18 36264788 36265208 -49723726 + L1MDa LINE L1 337 742 -5798 698 194 0 15 chr18 36265229 36265363 -49723571 + FLAM_C SINE Alu 1 132 -1 207 0 0 0 chr18 36265504 36265527 -49723407 + (A)n Simple_repeat Simple_repeat 1 23 0 2047 190 63 55 chr18 36265529 36266134 -49722800 + L1MB8 LINE L1 5558 6167 -11 1606 174 59 0 chr18 36266359 36266646 -49722288 - AluJb SINE Alu -8 304 1 221 239 0 0 chr18 36267050 36267096 -49721838 + (CACCAT)n Simple_repeat Simple_repeat 4 49 0 633 219 69 40 chr18 36267251 36267525 -49721409 + pTR5 LTR ERV1 741 1022 -1416 4989 86 88 47 chr18 36267561 36268354 -49720580 + LTR12 LTR ERV1 1 826 0 341 275 70 16 chr18 36268438 36268629 -49720305 - L1ME3A LINE L1 -222 5948 5745 262 167 0 19 chr18 36268641 36268695 -49720239 - AluJb SINE Alu -169 133 81 296 260 175 41 chr18 36268697 36268966 -49719968 - L1ME3A LINE L1 -430 5736 5432 294 255 118 10 chr18 36269812 36269914 -49719020 - MIR3 SINE MIR -4 204 92 1724 101 85 22 chr18 36271069 36271386 -49717548 + L1MA2 LINE L1 5968 6304 0 22 0 0 0 chr18 36271389 36271411 -49717523 + AT_rich Low_complexity Low_complexity 1 22 0 878 193 12 6 chr18 36271651 36271812 -49717122 - FRAM SINE Alu -22 154 1 758 196 20 13 chr18 36272091 36272244 -49716690 - AluJb SINE Alu -22 290 137 1765 175 32 0 chr18 36272339 36272624 -49716310 + AluJb SINE Alu 1 294 -18 2256 104 0 7 chr18 36272629 36272937 -49715997 + AluSg SINE Alu 1 306 -4 1645 164 7 34 chr18 36273175 36273468 -49715466 - AluJb SINE Alu -18 294 10 2182 219 15 10 chr18 36274042 36274632 -49714302 + L1M4 LINE L1 4175 4767 -1379 329 85 0 0 chr18 36274639 36274686 -49714248 + Alu SINE Alu 1 47 -252 216 97 0 0 chr18 36274829 36274860 -49714074 + (A)n Simple_repeat Simple_repeat 1 31 0 5261 108 24 47 chr18 36274861 36275726 -49713208 + L1PB1 LINE L1 5175 6015 -136 2217 126 0 0 chr18 36275726 36276027 -49712907 + AluSx SINE Alu 6 306 -6 5261 108 24 47 chr18 36276027 36276154 -49712780 + L1PB1 LINE L1 6015 6143 -8 2697 128 83 36 chr18 36276166 36276645 -49712289 + Tigger3(Golem) DNA MER2_type 2475 2983 -45 1935 166 3 16 chr18 36276645 36276959 -49711975 - AluJb SINE Alu -2 310 1 2697 128 83 36 chr18 36276959 36277008 -49711926 + Tigger3(Golem) DNA MER2_type 2983 3028 0 2033 118 5 95 chr18 36277010 36277053 -49711881 + L1MB4 LINE L1 5787 5832 -348 2082 134 3 19 chr18 36277053 36277366 -49711568 + AluSx SINE Alu 1 308 -4 2033 118 5 95 chr18 36277366 36277705 -49711229 + L1MB4 LINE L1 5832 6128 -52 2099 126 0 16 chr18 36277705 36278014 -49710920 + AluSx SINE Alu 1 304 -8 2033 118 5 95 chr18 36278014 36278063 -49710871 + L1MB4 LINE L1 6128 6180 0 538 198 104 26 chr18 36278086 36278278 -49710656 - L1MC5 LINE L1 -44 7917 7711 2016 148 0 0 chr18 36278289 36278580 -49710354 - AluSx SINE Alu -18 294 4 779 124 9 0 chr18 36278795 36278908 -49710026 + AluSq/x SINE Alu 5 118 -194 2066 102 72 19 chr18 36278929 36279292 -49709642 - Tigger4(Zombi) DNA MER2_type -17 2714 2333 1291 163 22 4 chr18 36279294 36279521 -49709413 - Tigger4(Zombi) DNA MER2_type -2500 231 1 662 230 29 6 chr18 36279537 36279711 -49709223 - MER20 DNA MER1_type -40 179 2 383 284 137 72 chr18 36279926 36280107 -49708827 - L3 LINE CR1 -43 1534 1327 2144 130 7 3 chr18 36280107 36280407 -49708527 - AluSx SINE Alu -9 303 3 383 284 137 72 chr18 36280407 36280503 -49708431 - L3 LINE CR1 -250 1327 1239 870 273 82 34 chr18 36280511 36280537 -49708397 - L2 LINE L2 0 3313 3290 2526 197 51 33 chr18 36280537 36281140 -49707794 + MER90 LTR ERV1 1 614 0 870 273 82 34 chr18 36281140 36281670 -49707264 - L2 LINE L2 -23 3290 2714 2113 152 7 0 chr18 36281700 36282010 -49706924 - AluSx SINE Alu 0 312 1 932 129 0 7 chr18 36282089 36282229 -49706705 - FLAM_C SINE Alu -4 139 1 427 276 39 16 chr18 36282233 36282360 -49706574 + L2 LINE L2 3180 3309 -4 202 316 189 25 chr18 36282354 36282550 -49706384 - L3 LINE CR1 -401 1176 949 * 285 75 0 0 chr18 36282746 36282786 -49706148 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 1180 189 0 28 chr18 36282787 36283004 -49705930 + AluJo SINE Alu 85 295 -17 416 315 96 20 chr18 36283038 36283235 -49705699 + MIR SINE MIR 30 241 -21 1201 79 0 48 chr18 36283300 36283512 -49705422 + AluSq SINE Alu 129 332 0 393 119 15 0 chr18 36283523 36283590 -49705344 - L1MB4 LINE L1 -274 5906 5839 306 233 16 108 chr18 36283655 36283784 -49705150 - L1MB4 LINE L1 -2380 5428 5312 1919 146 56 13 chr18 36284057 36284448 -49704486 + L1MB3 LINE L1 5774 6181 -2 2680 219 68 55 chr18 36284685 36285622 -49703312 - L1ME1 LINE L1 -79 6087 5163 1782 141 0 72 chr18 36285622 36285941 -49702993 - AluJb SINE Alu -16 296 1 2680 219 68 55 chr18 36285941 36286538 -49702396 - L1ME1 LINE L1 -1003 5163 4518 2525 70 0 0 chr18 36286538 36286840 -49702094 - AluY SINE Alu -9 302 1 2680 219 68 55 chr18 36286840 36287099 -49701835 - L1ME1 LINE L1 -1648 4518 4264 2357 234 27 25 chr18 36287102 36287657 -49701277 - LTR38 LTR ERV1 0 556 1 1756 199 0 0 chr18 36287724 36288016 -49700918 - AluJo SINE Alu -20 292 1 379 208 10 73 chr18 36288016 36288112 -49700822 - L1 LINE L1 -2053 4093 4004 1487 182 55 11 chr18 36288119 36288394 -49700540 - AluJo SINE Alu -23 289 3 5124 94 6 3 chr18 36288409 36289076 -49699858 - L1PA10 LINE L1 0 6168 5500 1593 191 53 10 chr18 36289076 36289380 -49699554 - L1P3 LINE L1 -6135 326 10 397 331 7 7 chr18 36289575 36289726 -49699208 - MER52A LTR ERV1 0 1755 1605 * 1236 243 63 68 chr18 36289722 36290117 -49698817 - MER52A LTR ERV1 -271 1484 1092 1037 176 169 59 chr18 36290104 36290377 -49698557 - MER52A LTR ERV1 -785 970 668 * 1162 222 32 41 chr18 36290389 36290577 -49698357 - L1 LINE L1 -2472 3674 3489 1705 144 8 19 chr18 36290577 36290841 -49698093 - AluSx SINE Alu -17 295 35 1162 222 32 41 chr18 36290841 36290990 -49697944 - L1 LINE L1 -2657 3489 3340 524 163 70 0 chr18 36290994 36291080 -49697854 - FLAM_A SINE Alu -19 123 32 1938 247 112 10 chr18 36291108 36291785 -49697149 + L1MB3 LINE L1 2926 3671 -2475 588 100 12 0 chr18 36291800 36291880 -49697054 + MSTA LTR MaLR 1 81 -347 4063 174 50 29 chr18 36291880 36292304 -49696630 + L1MB3 LINE L1 5334 5747 -436 3017 174 33 18 chr18 36292304 36292813 -49696121 + MLT2B3 LTR ERVL 1 520 -34 474 49 0 0 chr18 36292813 36292874 -49696060 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 3017 174 33 18 chr18 36292874 36292910 -49696024 + MLT2B3 LTR ERVL 520 554 0 4063 174 50 29 chr18 36292910 36293316 -49695618 + L1MB3 LINE L1 5747 6182 -1 485 245 163 26 chr18 36293669 36293856 -49695078 - L1M4 LINE L1 -2254 3892 3665 1195 250 126 29 chr18 36293856 36294147 -49694787 - LTR40c LTR ERVL -3 462 116 2278 105 0 0 chr18 36294147 36294443 -49694491 - AluSc SINE Alu -13 296 1 1195 250 126 29 chr18 36294443 36294571 -49694363 - LTR40c LTR ERVL -349 116 2 485 245 163 26 chr18 36294571 36294616 -49694318 - L1M4 LINE L1 -2481 3665 3628 2254 186 38 0 chr18 36295418 36295817 -49693117 - MER54A LTR ERVL 0 901 488 1079 130 49 5 chr18 36296194 36296379 -49692555 + L1MB2 LINE L1 5943 6135 -36 29 28 0 0 chr18 36298030 36298066 -49690868 + AT_rich Low_complexity Low_complexity 1 36 0 2043 132 0 10 chr18 36298433 36298728 -49690206 - AluSx SINE Alu -20 292 1 655 194 0 65 chr18 36298750 36298874 -49690060 + FLAM_A SINE Alu 20 135 -7 2085 141 0 3 chr18 36299366 36299671 -49689263 - AluSx SINE Alu -8 304 1 1813 174 0 13 chr18 36300986 36301285 -49687649 - AluJo SINE Alu -17 295 1 28 29 0 0 chr18 36301614 36301649 -49687285 + AT_rich Low_complexity Low_complexity 1 35 0 263 309 0 0 chr18 36302080 36302161 -49686773 + (TGG)n Simple_repeat Simple_repeat 3 83 0 23 33 0 0 chr18 36302707 36302737 -49686197 + AT_rich Low_complexity Low_complexity 1 30 0 2496 57 0 3 chr18 36303046 36303344 -49685590 + AluY SINE Alu 1 297 -14 297 0 0 0 chr18 36303348 36303381 -49685553 + (CAA)n Simple_repeat Simple_repeat 2 34 0 493 325 58 5 chr18 36303433 36303639 -49685295 - L2 LINE L2 -253 3060 2844 1345 186 232 98 chr18 36303749 36304373 -49684561 + L1MC4 LINE L1 7335 8042 0 296 194 32 0 chr18 36304781 36304843 -49684091 + MER5A DNA MER1_type 13 76 -113 2283 104 0 0 chr18 36304843 36305140 -49683794 + AluSg SINE Alu 1 297 -13 2497 57 0 0 chr18 36305636 36305932 -49683002 + AluY SINE Alu 1 296 -15 600 324 128 52 chr18 36306095 36306892 -49682042 - L2 LINE L2 0 3272 2434 459 242 23 39 chr18 36307232 36307360 -49681574 - L2 LINE L2 -1 3312 3187 992 156 5 73 chr18 36307618 36307810 -49681124 + FRAM SINE Alu 1 176 0 828 137 0 0 chr18 36308560 36308677 -49680257 - FLAM_C SINE Alu -24 119 3 22 0 0 0 chr18 36308776 36308798 -49680136 + AT_rich Low_complexity Low_complexity 1 22 0 2148 145 7 0 chr18 36309033 36309343 -49679591 - AluSx SINE Alu 0 312 1 243 61 0 0 chr18 36313230 36313263 -49675671 + (A)n Simple_repeat Simple_repeat 1 33 0 258 318 0 0 chr18 36314492 36314618 -49674316 + (ATGGTG)n Simple_repeat Simple_repeat 1 126 0 919 153 0 0 chr18 36315278 36315409 -49673525 + FLAM_C SINE Alu 1 131 -2 21 0 0 0 chr18 36315642 36315663 -49673271 + AT_rich Low_complexity Low_complexity 1 21 0 917 130 15 0 chr18 36315666 36315797 -49673137 - FLAM_C SINE Alu 0 133 1 1806 136 3 20 chr18 36318777 36319071 -49669863 + AluJo SINE Alu 1 289 -23 1264 150 107 9 chr18 36319409 36319642 -49669292 + MER41D LTR ERV1 1 256 -301 198 0 0 0 chr18 36319821 36319843 -49669091 + (T)n Simple_repeat Simple_repeat 1 22 0 1233 154 99 21 chr18 36319843 36320076 -49668858 - AluSg SINE Alu -59 251 1 223 336 74 16 chr18 36320148 36320270 -49668664 - L2 LINE L2 -6 3266 3138 261 57 0 0 chr18 36321599 36321634 -49667300 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 337 194 148 53 chr18 36321659 36321794 -49667140 - AluSp/q SINE Alu -7 296 220 180 0 0 0 chr18 36321794 36321814 -49667120 + (T)n Simple_repeat Simple_repeat 1 20 0 996 53 0 38 chr18 36321986 36322119 -49666815 - AluYa5/8 SINE Alu 0 311 184 575 198 10 0 chr18 36322120 36322221 -49666713 - AluJo/FLAM SINE Alu -209 103 2 215 260 0 104 chr18 36322235 36322312 -49666622 + MIR3 SINE MIR 92 160 -48 1846 211 26 20 chr18 36322343 36322798 -49666136 + Charlie1b DNA MER1_type 66 523 0 24 53 0 0 chr18 36323400 36323438 -49665496 + AT_rich Low_complexity Low_complexity 1 38 0 271 335 45 9 chr18 36323509 36323617 -49665317 - MIR3 SINE MIR -111 97 8 1440 260 67 36 chr18 36323751 36324323 -49664611 + L1MC4 LINE L1 7266 7991 -51 305 152 0 61 chr18 36324503 36324569 -49664365 - AluJo SINE Alu 0 302 241 625 167 61 18 chr18 36324570 36324642 -49664292 - AluJo SINE Alu -113 199 119 189 0 0 0 chr18 36324642 36324663 -49664271 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 625 167 61 18 chr18 36324663 36324704 -49664230 - AluJo SINE Alu -193 119 81 928 210 12 0 chr18 36325272 36325434 -49663500 - FAM SINE Alu -11 164 1 958 266 81 6 chr18 36325791 36326137 -49662797 + L1MC4 LINE L1 7192 7563 -479 333 210 0 0 chr18 36326142 36326204 -49662730 - L1ME LINE L1 -458 5663 5602 25 51 0 0 chr18 36327861 36327900 -49661034 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr18 36327919 36327943 -49660991 + AT_rich Low_complexity Low_complexity 1 24 0 1823 161 24 0 chr18 36327943 36328235 -49660699 - AluJo SINE Alu -11 301 3 614 116 0 0 chr18 36328258 36328344 -49660590 - AluJ/FRAM SINE Alu -11 301 216 333 138 0 92 chr18 36328344 36328409 -49660525 - AluSc SINE Alu -124 175 117 2125 139 0 22 chr18 36328431 36328747 -49660187 - AluSx SINE Alu -3 309 1 1545 198 7 10 chr18 36329786 36330079 -49658855 - AluJb SINE Alu -12 300 9 2159 92 0 81 chr18 36331181 36331516 -49657418 - AluSx SINE Alu -4 308 1 1502 174 102 4 chr18 36331516 36331791 -49657143 - AluJo SINE Alu -10 302 1 970 145 25 0 chr18 36332408 36332567 -49656367 - THE1C LTR MaLR 0 375 213 591 149 0 21 chr18 36332567 36332661 -49656273 - THE1C LTR MaLR -283 92 1 602 275 29 23 chr18 36333735 36333974 -49654960 - L1ME3A LINE L1 -281 5889 5674 497 230 97 0 chr18 36334826 36334939 -49653995 + FLAM_A SINE Alu 2 125 -17 700 205 90 111 chr18 36335058 36335176 -49653758 + MIR SINE MIR 13 132 -130 1574 181 55 10 chr18 36335176 36335469 -49653465 - AluJo SINE Alu -5 307 2 700 205 90 111 chr18 36335469 36335501 -49653433 + MIR SINE MIR 132 163 -99 2108 92 3 31 chr18 36335501 36335816 -49653118 - AluSq SINE Alu 0 307 1 700 205 90 111 chr18 36335816 36335907 -49653027 + MIR SINE MIR 163 251 -11 1003 187 61 45 chr18 36335935 36336186 -49652748 - MER21B LTR ERV1 -364 499 254 2091 86 75 0 chr18 36336186 36336465 -49652469 - AluY SINE Alu -11 300 1 1003 187 61 45 chr18 36336465 36336624 -49652310 - MER21B LTR ERV1 -609 254 1 6998 131 21 62 chr18 36336646 36336670 -49652264 - MER21B-int LTR ERV1 -25 4166 4143 1706 152 0 55 chr18 36336670 36336979 -49651955 + AluJb SINE Alu 1 292 -20 6998 131 21 62 chr18 36336979 36338320 -49650614 - MER21B-int LTR ERV1 -48 4143 2841 4238 192 36 71 chr18 36338317 36339172 -49649762 - MER4B-int LTR ERV1 -1576 5182 4365 * 2006 148 7 0 chr18 36339172 36339476 -49649458 - AluJb SINE Alu -6 306 1 4238 192 36 71 chr18 36339476 36339600 -49649334 - MER4B-int LTR ERV1 -2393 4365 4238 908 151 0 26 chr18 36339616 36339768 -49649166 + AluJb SINE Alu 1 148 -164 358 183 0 0 chr18 36339771 36339831 -49649103 - MER4B-int LTR ERV1 -1056 3135 3076 2015 108 17 20 chr18 36339836 36340131 -49648803 - AluSq SINE Alu -19 294 1 865 148 7 28 chr18 36340155 36340297 -49648637 + AluJb SINE Alu 164 302 -10 6822 136 34 26 chr18 36340297 36341439 -49647495 - MER4B-int LTR ERV1 -2523 4235 3085 2067 114 70 5 chr18 36341511 36341838 -49647096 - MER21A LTR ERV1 -8 597 498 619 99 25 66 chr18 36341846 36341967 -49646967 - L1MC1 LINE L1 0 6333 6218 431 268 98 59 chr18 36342007 36342294 -49646640 + MARNA DNA Mariner 86 383 -203 23 68 0 0 chr18 36342489 36342533 -49646401 + AT_rich Low_complexity Low_complexity 1 44 0 426 250 76 8 chr18 36342536 36342668 -49646266 - MIR SINE MIR -21 241 101 1997 117 16 26 chr18 36343092 36343399 -49645535 - AluSq SINE Alu -9 304 1 1011 220 19 0 chr18 36343437 36343651 -49645283 + L1MC/D LINE L1 5375 5592 -650 948 128 14 14 chr18 36343686 36343827 -49645107 - AluJo SINE Alu -82 230 90 525 187 73 0 chr18 36343831 36343954 -49644980 - Cheshire DNA MER1_type -802 1618 1487 939 221 21 0 chr18 36344108 36344298 -49644636 - Cheshire DNA MER1_type -940 1480 1287 682 136 64 32 chr18 36344301 36344426 -49644508 + Cheshire DNA MER1_type 879 1007 -1413 181 81 27 27 chr18 36345464 36345501 -49643433 + (GA)n Simple_repeat Simple_repeat 1 37 0 2338 108 0 0 chr18 36347183 36347488 -49641446 - AluSx SINE Alu -7 305 1 1999 149 0 10 chr18 36348368 36348669 -49640265 + AluJo SINE Alu 1 298 -14 934 128 0 0 chr18 36349341 36349466 -49639468 + AluSg/x SINE Alu 155 279 -33 2970 223 72 42 chr18 36350122 36351003 -49637931 - L1ME1 LINE L1 -5 6161 5187 1941 174 49 13 chr18 36351003 36351350 -49637584 - L1PB4 LINE L1 -8 6148 5784 342 0 0 0 chr18 36351350 36351388 -49637546 + (TG)n Simple_repeat Simple_repeat 2 39 0 1941 174 49 13 chr18 36351388 36351431 -49637503 - L1PB4 LINE L1 -372 5784 5744 2970 223 72 42 chr18 36351431 36352166 -49636768 - L1ME1 LINE L1 -979 5187 4475 2242 112 0 0 chr18 36353690 36353984 -49634950 + AluSx SINE Alu 3 296 -16 1835 160 0 27 chr18 36353996 36354296 -49634638 + AluSx SINE Alu 1 292 -20 2405 82 0 13 chr18 36354410 36354727 -49634207 - AluSq SINE Alu 0 313 1 38 39 0 0 chr18 36355317 36355369 -49633565 + AT_rich Low_complexity Low_complexity 1 52 0 1629 152 74 21 chr18 36355788 36356071 -49632863 - AluJb SINE Alu -14 298 1 2668 111 11 0 chr18 36356451 36356822 -49632112 - THE1C LTR MaLR 0 375 1 300 244 11 11 chr18 36357011 36357101 -49631833 - AluSp/q SINE Alu 0 303 214 216 0 0 0 chr18 36357226 36357250 -49631684 + (A)n Simple_repeat Simple_repeat 1 24 0 1443 253 57 10 chr18 36357753 36358157 -49630777 - MLT1J LTR MaLR -54 457 35 253 287 11 11 chr18 36358157 36358244 -49630690 + MIR SINE MIR 151 237 -25 2345 102 0 0 chr18 36358604 36358907 -49630027 - AluSq SINE Alu -10 303 1 266 191 0 0 chr18 36358913 36358955 -49629979 - FLAM SINE Alu -6 127 86 1283 184 9 0 chr18 36358955 36359173 -49629761 - AluJo SINE Alu -92 220 1 532 54 68 0 chr18 36360359 36360433 -49628501 + MADE1 DNA Mariner 2 80 0 303 71 0 0 chr18 36361887 36361929 -49627005 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 203 273 61 0 chr18 36363008 36363074 -49625860 + MER5A DNA MER1_type 7 76 -113 191 167 48 0 chr18 36363228 36363270 -49625664 - MIR3 SINE MIR -54 154 111 365 245 146 31 chr18 36363314 36363506 -49625428 + MIR SINE MIR 24 237 -25 2421 100 0 3 chr18 36365214 36365524 -49623410 - AluSq SINE Alu -4 309 1 2485 76 0 3 chr18 36365684 36365987 -49622947 - AluSq SINE Alu -11 302 1 2193 126 0 7 chr18 36366602 36366912 -49622022 - AluSx SINE Alu -4 308 1 1893 166 0 10 chr18 36368010 36368318 -49620616 - AluJb SINE Alu -7 305 1 1014 157 21 42 chr18 36368380 36368571 -49620363 + AluJb SINE Alu 102 288 -24 23 0 0 0 chr18 36368793 36368816 -49620118 + AT_rich Low_complexity Low_complexity 1 23 0 375 299 68 91 chr18 36369539 36369803 -49619131 + MARNA DNA Mariner 125 382 -204 28 29 0 0 chr18 36370495 36370530 -49618404 + AT_rich Low_complexity Low_complexity 1 35 0 1625 101 18 0 chr18 36371073 36371291 -49617643 - AluSx SINE Alu -90 222 1 965 143 262 16 chr18 36372296 36372540 -49616394 - MER33 DNA MER1_type -19 305 2 2532 152 41 13 chr18 36373497 36373965 -49614969 + L1MB2 LINE L1 5684 6164 -7 422 263 0 9 chr18 36374024 36374138 -49614796 + MER103 DNA DNA 2 114 -52 414 171 26 0 chr18 36374598 36374674 -49614260 + L1ME1 LINE L1 5940 6017 -149 568 243 20 40 chr18 36374679 36374881 -49614053 + L1MC5 LINE L1 7453 7650 -311 559 172 0 0 chr18 36374924 36375017 -49613917 - FLAM_A SINE Alu -7 135 43 1168 60 0 0 chr18 36375477 36375610 -49613324 + AluSq/x SINE Alu 1 133 -179 21 0 0 0 chr18 36375610 36375631 -49613303 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr18 36375631 36375652 -49613282 + GC_rich Low_complexity Low_complexity 1 21 0 273 263 50 40 chr18 36375911 36376010 -49612924 + MLT1L LTR MaLR 178 277 -338 223 248 43 43 chr18 36376594 36376711 -49612223 - MER5B DNA MER1_type -61 117 1 198 0 0 0 chr18 36378171 36378193 -49610741 + (TC)n Simple_repeat Simple_repeat 1 22 0 203 328 16 0 chr18 36379182 36379246 -49609688 - MIR SINE MIR -190 72 8 1802 106 129 124 chr18 36379550 36379723 -49609211 + MSTA LTR MaLR 1 172 -256 1913 148 4 0 chr18 36379723 36380033 -49608901 + AluJb SINE Alu 3 313 0 1802 106 129 124 chr18 36380033 36380044 -49608890 + MSTA LTR MaLR 172 181 -247 1362 144 219 8 chr18 36380044 36380300 -49608634 + AluJb SINE Alu 1 310 -2 1802 106 129 124 chr18 36380300 36380539 -49608395 + MSTA LTR MaLR 181 428 0 1733 160 36 0 chr18 36380710 36380985 -49607949 - AluJo SINE Alu -25 287 3 180 0 0 0 chr18 36381004 36381024 -49607910 + (CA)n Simple_repeat Simple_repeat 1 20 0 549 134 0 0 chr18 36381095 36381177 -49607757 + L2 LINE L2 3225 3306 -7 3619 201 21 19 chr18 36381178 36381903 -49607031 + L1M4 LINE L1 3951 4680 -1466 2078 138 3 3 chr18 36381903 36382201 -49606733 - AluSx SINE Alu -14 298 1 3619 201 21 19 chr18 36382201 36382279 -49606655 + L1M4 LINE L1 4680 4756 -1390 2979 13 0 0 chr18 36382283 36382601 -49606333 + AluYb8 SINE Alu 1 318 0 240 35 0 0 chr18 36382752 36382781 -49606153 + (A)n Simple_repeat Simple_repeat 1 29 0 699 136 68 25 chr18 36383472 36383590 -49605344 - AluJb SINE Alu -188 124 2 2018 125 52 33 chr18 36383744 36384111 -49604823 - THE1C LTR MaLR -1 374 1 181 358 33 8 chr18 36384661 36384781 -49604153 - MIR SINE MIR -130 132 10 1972 122 55 6 chr18 36385161 36385488 -49603446 - L1MB4 LINE L1 -6 6174 5832 2229 118 0 16 chr18 36385809 36386115 -49602819 + AluJb SINE Alu 2 302 -10 2196 130 0 0 chr18 36386839 36387138 -49601796 - AluSx SINE Alu -13 299 1 647 186 168 12 chr18 36387150 36387317 -49601617 - MSTB1 LTR MaLR -50 382 190 2288 115 3 16 chr18 36387330 36387643 -49601291 - AluSx SINE Alu -2 310 2 8393 191 9 4 chr18 36387644 36388144 -49600790 - L1PA15 LINE L1 -6 6159 5663 2103 138 7 0 chr18 36388144 36388435 -49600499 - AluSx SINE Alu -19 293 1 8393 191 9 4 chr18 36388435 36390267 -49598667 - L1PA15 LINE L1 -502 5663 3777 1858 155 0 46 chr18 36390270 36390445 -49598489 - AluJb SINE Alu -4 308 153 3887 82 14 6 chr18 36390445 36390956 -49597978 - L1PB2 LINE L1 -4 6147 5633 1858 155 0 46 chr18 36390956 36391103 -49597831 - AluJb SINE Alu -159 153 1 908 193 0 0 chr18 36391103 36391269 -49597665 - L1PA15 LINE L1 -2359 3787 3622 815 117 0 0 chr18 36391669 36391780 -49597154 + AluSq/x SINE Alu 3 113 -200 560 230 56 41 chr18 36391780 36391976 -49596958 + L1MB7 LINE L1 5010 5208 -938 2843 145 60 8 chr18 36391976 36392479 -49596455 + L1MB7 LINE L1 5648 6176 -8 1134 299 34 3 chr18 36392597 36392978 -49595956 - L1MB4 LINE L1 -2025 5783 5391 245 296 123 39 chr18 36393863 36394042 -49594892 - L2 LINE L2 -2 3311 3118 531 274 5 54 chr18 36394491 36394677 -49594257 - MIR SINE MIR -70 192 16 216 316 196 0 chr18 36395459 36395592 -49593342 + L3 LINE CR1 1408 1566 -11 1580 233 51 63 chr18 36395645 36395662 -49593272 - L1MB7 LINE L1 -36 6148 6132 1668 173 3 40 chr18 36395662 36395963 -49592971 + AluJo SINE Alu 1 290 -22 1580 233 51 63 chr18 36395963 36396285 -49592649 - L1MB7 LINE L1 -52 6132 5816 1690 160 14 18 chr18 36396285 36396560 -49592374 + AluJo SINE Alu 1 274 -38 1580 233 51 63 chr18 36396560 36396791 -49592143 - L1MB7 LINE L1 -368 5816 5584 246 330 113 9 chr18 36399452 36399558 -49589376 + MIR SINE MIR 38 154 -108 2226 135 0 3 chr18 36399561 36399872 -49589062 + AluSg SINE Alu 1 310 0 378 0 0 0 chr18 36399993 36400035 -49588899 + (A)n Simple_repeat Simple_repeat 1 42 0 678 215 200 0 chr18 36400470 36400675 -49588259 + MIR SINE MIR 9 254 -8 1686 259 41 32 chr18 36400904 36401476 -49587458 + MLT1G LTR MaLR 32 588 -2 2334 92 0 19 chr18 36402801 36403115 -49585819 + AluSx SINE Alu 1 308 -4 2259 111 3 9 chr18 36403115 36403429 -49585505 + AluSp SINE Alu 1 313 0 194 141 14 56 chr18 36403858 36403929 -49585005 + GA-rich Low_complexity Low_complexity 4 71 0 249 325 70 0 chr18 36404375 36404489 -49584445 - MIR SINE MIR -32 230 109 22 35 0 0 chr18 36404567 36404596 -49584338 + AT_rich Low_complexity Low_complexity 1 29 0 374 232 93 40 chr18 36405386 36405537 -49583397 - MIR SINE MIR -19 243 85 3341 226 102 12 chr18 36405538 36406433 -49582501 + L1MC4 LINE L1 6923 7897 -145 29 0 0 0 chr18 36406507 36406536 -49582398 + AT_rich Low_complexity Low_complexity 1 29 0 1763 170 0 17 chr18 36407675 36407969 -49580965 - AluJo SINE Alu -23 289 1 2128 113 0 0 chr18 36407987 36408320 -49580614 - AluSg SINE Alu 0 333 1 727 115 0 10 chr18 36408328 36408452 -49580482 - AluSg/x SINE Alu 0 309 187 2192 107 0 10 chr18 36408554 36408876 -49580058 + AluSx SINE Alu 5 312 0 232 160 20 0 chr18 36408977 36409027 -49579907 - LTR33 LTR ERVL -467 54 4 1212 178 0 19 chr18 36409460 36409674 -49579260 + AluSg/x SINE Alu 84 293 -19 1918 126 23 26 chr18 36409800 36410102 -49578832 + AluSx SINE Alu 1 301 -11 886 170 106 21 chr18 36410259 36410447 -49578487 + MER3 DNA MER1_type 6 209 0 240 208 42 0 chr18 36410406 36410454 -49578480 - MER3 DNA MER1_type -119 90 41 * 360 0 0 0 chr18 36410758 36410798 -49578136 + (TTCTG)n Simple_repeat Simple_repeat 3 42 0 2194 105 10 0 chr18 36410874 36411170 -49577764 - AluSp SINE Alu -14 299 1 10078 206 36 81 chr18 36411196 36411730 -49577204 - L1MB1 LINE L1 -321 6083 5526 2462 60 3 19 chr18 36411730 36412046 -49576888 - AluY SINE Alu 0 311 1 10078 206 36 81 chr18 36412046 36412974 -49575960 - L1MB1 LINE L1 -878 5526 4557 1028 150 0 36 chr18 36412974 36413141 -49575793 - FRAM SINE Alu -14 162 2 10078 206 36 81 chr18 36413141 36414289 -49574645 - L1MB1 LINE L1 -1847 4557 3358 2476 78 0 0 chr18 36414289 36414595 -49574339 - AluSc SINE Alu -2 307 2 10078 206 36 81 chr18 36414595 36416030 -49572904 - L1MB1 LINE L1 -3046 3358 2029 1624 167 0 77 chr18 36416034 36416358 -49572576 - AluJb SINE Alu -13 299 1 954 188 0 0 chr18 36416396 36416545 -49572389 - AluJo/FRAM SINE Alu -30 282 134 2190 128 0 0 chr18 36416546 36416842 -49572092 - AluSx SINE Alu -16 296 1 6987 79 16 1 chr18 36416889 36417993 -49570941 + L1PA13 LINE L1 5047 6163 0 599 239 9 0 chr18 36417998 36418107 -49570827 - FLAM_A SINE Alu -26 116 7 3058 228 56 30 chr18 36418118 36419232 -49569702 - L1MB1 LINE L1 -4324 2058 908 1966 125 20 17 chr18 36419232 36419529 -49569405 - AluSx SINE Alu -14 298 1 3058 228 56 30 chr18 36419529 36419646 -49569288 - L1MB1 LINE L1 -5474 908 796 1096 280 32 10 chr18 36419710 36420021 -49568913 - L1MB1 LINE L1 -5473 830 513 725 298 90 21 chr18 36420021 36420498 -49568436 - L1M4 LINE L1 -1925 4221 3712 239 0 0 31 chr18 36420687 36420719 -49568215 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1859 157 0 25 chr18 36421101 36421419 -49567515 - AluJo SINE Alu -2 310 1 4091 112 20 42 chr18 36421470 36422000 -49566934 - L1MA5 LINE L1 -5 6295 5781 216 0 0 0 chr18 36422000 36422024 -49566910 + (CA)n Simple_repeat Simple_repeat 2 25 0 4091 112 20 42 chr18 36422024 36422153 -49566781 - L1MA5 LINE L1 -519 5781 5651 6052 155 9 10 chr18 36422165 36423800 -49565134 - L1PB1 LINE L1 -2 6865 5234 1969 156 73 25 chr18 36423817 36424175 -49564759 - THE1C LTR MaLR 0 375 1 548 74 0 25 chr18 36424175 36424256 -49564678 - THE1C-int LTR MaLR 0 1580 1502 43926 31 22 1 chr18 36424268 36430292 -49558642 - L1PA3 LINE L1 -3 6152 3 8614 128 96 9 chr18 36430286 36431689 -49557245 - THE1C-int LTR MaLR -56 1524 1 * 1898 130 96 37 chr18 36431689 36432043 -49556891 - THE1C LTR MaLR 0 375 1 17998 158 54 15 chr18 36432049 36437062 -49551872 - L1PB1 LINE L1 -1637 5225 3 3356 154 25 11 chr18 36437071 36438006 -49550928 - L1MA5 LINE L1 -632 5668 4723 729 250 97 58 chr18 36438206 36438586 -49550348 + L2 LINE L2 2804 3198 -115 455 316 79 11 chr18 36438707 36438973 -49549961 - L2 LINE L2 -586 2728 2445 298 277 20 40 chr18 36440741 36440842 -49548092 + MIR SINE MIR 30 128 -80 829 236 42 64 chr18 36440978 36441291 -49547643 + L2 LINE L2 3008 3313 0 1878 123 0 120 chr18 36441376 36441709 -49547225 + AluJb SINE Alu 5 297 -5 856 169 0 0 chr18 36441711 36441841 -49547093 + AluJo/FRAM SINE Alu 137 266 -46 2419 72 3 0 chr18 36442519 36442812 -49546122 + AluSg SINE Alu 1 294 -16 742 210 26 44 chr18 36443307 36443536 -49545398 - Charlie2 DNA MER1_type 0 2862 2638 333 0 0 0 chr18 36443592 36443629 -49545305 + (TG)n Simple_repeat Simple_repeat 2 38 0 243 61 0 0 chr18 36443631 36443664 -49545270 + (GA)n Simple_repeat Simple_repeat 2 34 0 231 217 0 0 chr18 36443704 36443750 -49545184 + L1MC4 LINE L1 6658 6703 -1339 934 219 11 35 chr18 36443750 36444010 -49544924 - Charlie2 DNA MER1_type -251 2611 2358 827 172 0 14 chr18 36444010 36444155 -49544779 - FLAM_C SINE Alu 0 143 1 635 262 66 15 chr18 36444156 36444589 -49544345 - Charlie2 DNA MER1_type -513 2349 1857 348 317 158 0 chr18 36444604 36444825 -49544109 - Charlie2 DNA MER1_type -2549 313 58 2103 118 3 26 chr18 36445014 36445318 -49543616 - AluSp SINE Alu -16 297 1 1878 131 46 23 chr18 36445557 36445862 -49543072 - AluSx SINE Alu 0 312 1 286 171 66 26 chr18 36446275 36446351 -49542583 - MIR3 SINE MIR -24 184 106 234 308 231 14 chr18 36447543 36447686 -49541248 - MIR3 SINE MIR -7 201 28 723 201 85 0 chr18 36447997 36448161 -49540773 - L1ME3 LINE L1 -92 6070 5893 2098 134 0 20 chr18 36448287 36448593 -49540341 + AluJb SINE Alu 1 300 -12 337 267 172 22 chr18 36449862 36450042 -49538892 + L2 LINE L2 2763 2969 -345 364 291 19 0 chr18 36450134 36450237 -49538697 + L2 LINE L2 3209 3313 0 1348 150 20 61 chr18 36450316 36450562 -49538372 + MER46A DNA MER2_type 1 236 0 318 254 30 9 chr18 36451227 36451333 -49537601 + L1ME LINE L1 5587 5659 -462 899 179 98 27 chr18 36451336 36451374 -49537560 + AluJo SINE Alu 84 118 -194 432 0 0 0 chr18 36451374 36451422 -49537512 + (CA)n Simple_repeat Simple_repeat 2 49 0 899 179 98 27 chr18 36451422 36451567 -49537367 + AluJo SINE Alu 118 280 -32 1880 172 7 0 chr18 36451650 36451941 -49536993 - AluSx SINE Alu -18 294 2 1776 186 0 0 chr18 36451972 36452262 -49536672 + AluJo SINE Alu 1 290 -22 1777 167 6 13 chr18 36453040 36453352 -49535582 + AluSq SINE Alu 1 310 -3 581 114 0 0 chr18 36453934 36454013 -49534921 + U4 snRNA snRNA 1 79 -66 232 191 0 0 chr18 36454875 36454922 -49534012 + LTR66 LTR ERVL 393 439 -171 509 296 28 9 chr18 36455015 36455231 -49533703 - L1ME3 LINE L1 -296 5825 5606 1791 146 0 0 chr18 36455306 36455573 -49533361 - AluSx SINE Alu -39 273 7 334 149 81 27 chr18 36456963 36457037 -49531897 - L1MD3 LINE L1 -13 7982 7905 391 320 78 43 chr18 36458614 36458845 -49530089 - L3 LINE CR1 -66 1511 1273 2351 84 3 3 chr18 36459583 36459879 -49529055 + AluSc SINE Alu 3 298 -11 224 305 96 96 chr18 36459925 36459968 -49528966 + L2 LINE L2 3024 3066 -206 1933 141 0 36 chr18 36459968 36460274 -49528660 - AluJo SINE Alu -17 295 1 224 305 96 96 chr18 36460274 36460427 -49528507 + L2 LINE L2 3065 3220 -52 39 60 0 0 chr18 36460470 36460537 -49528397 + AT_rich Low_complexity Low_complexity 1 67 0 2167 116 0 19 chr18 36461342 36461660 -49527274 + AluSx SINE Alu 1 312 0 287 44 0 0 chr18 36461980 36462025 -49526909 - L1MA3 LINE L1 0 6305 6261 2259 44 0 4 chr18 36462186 36462456 -49526478 + AluY SINE Alu 40 308 -3 1839 85 13 0 chr18 36464157 36464393 -49524541 + AluSx SINE Alu 59 297 -15 347 268 162 43 chr18 36464396 36464867 -49524067 + L1MEd LINE L1 920 1343 -4862 31127 40 1 2 chr18 36465125 36469555 -49519379 - L1PA6 LINE L1 -87 6067 1643 1882 153 0 17 chr18 36469655 36469950 -49518984 - AluSx SINE Alu -22 290 1 540 271 46 50 chr18 36470260 36470522 -49518412 - MIR SINE MIR 0 262 2 924 280 93 55 chr18 36470561 36471602 -49517332 + L1MEd LINE L1 2070 3118 -3097 244 331 18 25 chr18 36471940 36472103 -49516831 + L1MEd LINE L1 2568 2729 -3486 451 205 32 90 chr18 36472208 36472364 -49516570 + L1MEd LINE L1 4232 4378 -1837 715 182 0 0 chr18 36472369 36472479 -49516455 + MER45A DNA AcHobo 68 177 -1 960 269 39 11 chr18 36473185 36473546 -49515388 - L1M4 LINE L1 -3043 3103 2733 1681 218 41 5 chr18 36473638 36474055 -49514879 - L1M4 LINE L1 -2050 4096 3665 578 271 23 27 chr18 36474060 36474281 -49514653 - L1M4 LINE L1 -3601 2545 2326 349 270 163 9 chr18 36474298 36474513 -49514421 + L1M4 LINE L1 3707 3954 -2192 575 286 7 0 chr18 36474683 36474823 -49514111 + LTR67 LTR ERVL 415 555 -2 248 291 0 0 chr18 36475278 36475333 -49513601 + MLT1-int LTR MaLR 808 862 -509 297 321 37 37 chr18 36475957 36476066 -49512868 - L2 LINE L2 -39 3233 3125 26 74 0 0 chr18 36476537 36476591 -49512343 + AT_rich Low_complexity Low_complexity 1 54 0 529 269 45 19 chr18 36476623 36476779 -49512155 - MIR SINE MIR -66 196 37 811 258 9 24 chr18 36476819 36477032 -49511902 - MIR SINE MIR -39 223 14 818 221 13 0 chr18 36477197 36477351 -49511583 - FRAM SINE Alu -9 157 2 2178 119 0 3 chr18 36477542 36477836 -49511098 + AluY SINE Alu 3 295 -16 290 328 98 8 chr18 36478486 36478608 -49510326 + MIR SINE MIR 92 224 -38 248 260 13 0 chr18 36478994 36479071 -49509863 + (TA)n Simple_repeat Simple_repeat 1 78 0 353 191 32 64 chr18 36479145 36479223 -49509711 - MER69 DNA AcHobo 0 2526 2450 1524 189 79 0 chr18 36479223 36479503 -49509431 + AluJb SINE Alu 1 302 -10 353 191 32 64 chr18 36479503 36479518 -49509416 - MER69 DNA AcHobo -76 2450 2436 280 284 40 0 chr18 36479628 36479702 -49509232 - MER69 DNA AcHobo -2449 77 1 2315 98 10 0 chr18 36480022 36480318 -49508616 + AluSq SINE Alu 1 299 -14 21 0 0 0 chr18 36480682 36480703 -49508231 + AT_rich Low_complexity Low_complexity 1 21 0 722 204 7 7 chr18 36481181 36481323 -49507611 - Zaphod DNA AcHobo 0 4031 3890 1043 303 102 9 chr18 36481439 36481782 -49507152 - MER115 DNA AcHobo -318 375 1 2190 258 58 40 chr18 36481789 36481944 -49506990 + HAL1 LINE L1 659 810 -1697 2251 125 0 0 chr18 36481944 36482256 -49506678 - AluSx SINE Alu 0 312 1 2190 258 58 40 chr18 36482256 36482916 -49506018 + HAL1 LINE L1 810 1494 -1013 2152 163 21 3 chr18 36482916 36483253 -49505681 + MER2 DNA MER2_type 1 343 -1 2190 258 58 40 chr18 36483253 36483355 -49505579 + HAL1 LINE L1 1494 1593 -914 1386 244 59 82 chr18 36483360 36483922 -49505012 + MLT1H LTR MaLR 1 549 0 395 253 0 10 chr18 36483926 36484025 -49504909 + MLT1H-int LTR MaLR 5 102 -1269 1777 171 30 0 chr18 36484204 36484503 -49504431 + AluSx SINE Alu 1 308 -4 398 303 67 6 chr18 36486203 36486381 -49502553 - MIR SINE MIR -54 208 20 2014 132 0 13 chr18 36486854 36487164 -49501770 - AluJb SINE Alu -6 306 1 405 264 19 9 chr18 36487171 36487277 -49501657 - L1ME3A LINE L1 -5 6165 6059 253 189 213 110 chr18 36488465 36488592 -49500342 + MER5A DNA MER1_type 41 180 -9 237 288 30 0 chr18 36489004 36489070 -49499864 + tRNA-Ile-ATT tRNA tRNA 7 74 -3 575 248 56 6 chr18 36489230 36489391 -49499543 - MIR SINE MIR -40 222 54 1218 188 143 41 chr18 36490088 36490556 -49498378 + L1MC5 LINE L1 7402 7917 -44 347 195 23 23 chr18 36492677 36492764 -49496170 + L2 LINE L2 2699 2785 -529 464 217 0 0 chr18 36492827 36492910 -49496024 + L2 LINE L2 3225 3307 -6 218 316 51 71 chr18 36492925 36493086 -49495848 - L3 LINE CR1 -17 1560 1402 2211 104 0 0 chr18 36493086 36493384 -49495550 - AluSg SINE Alu -12 298 1 218 316 51 71 chr18 36493384 36493418 -49495516 - L3 LINE CR1 -175 1402 1369 400 221 44 44 chr18 36493937 36494159 -49494775 - L1ME4a LINE L1 -43 6078 5762 261 254 88 26 chr18 36494791 36494905 -49494029 + L2 LINE L2 3185 3305 -8 2240 118 0 3 chr18 36496526 36496840 -49492094 + AluSq SINE Alu 1 313 0 211 340 187 21 chr18 36497974 36498638 -49490296 + L2 LINE L2 1598 2371 -943 262 159 0 0 chr18 36498800 36498844 -49490090 + L2 LINE L2 3269 3312 -1 873 239 162 59 chr18 36498906 36499413 -49489521 - MLT1F1 LTR MaLR 0 567 9 1921 237 47 10 chr18 36499419 36499913 -49489021 - L1ME1 LINE L1 -20 6146 5635 1033 152 6 0 chr18 36500004 36500169 -49488765 - AluJb SINE Alu -10 302 137 6942 53 0 1 chr18 36502845 36503691 -49485243 - L1PA6 LINE L1 0 6154 5310 12867 67 5 3 chr18 36503791 36505705 -49483229 - L1P2 LINE L1 -542 5612 3694 11212 67 4 13 chr18 36505691 36507196 -49481738 + L1P2 LINE L1 2187 3678 -2468 * 544 348 11 11 chr18 36507318 36507505 -49481429 - L2 LINE L2 -1 3312 3126 315 206 29 98 chr18 36507502 36507604 -49481330 + MIR3 SINE MIR 107 201 -7 * 193 217 22 0 chr18 36508902 36508948 -49479986 + L2 LINE L2 3203 3249 -64 227 219 31 31 chr18 36509384 36509448 -49479486 - L2 LINE L2 0 3272 3209 338 308 42 0 chr18 36509561 36509681 -49479253 + MIR SINE MIR 106 230 -32 2229 249 122 28 chr18 36510585 36511853 -49477081 + L1ME3A LINE L1 4781 6165 -5 193 114 0 45 chr18 36512197 36512241 -49476693 + (TTCTCC)n Simple_repeat Simple_repeat 5 46 0 1512 113 90 30 chr18 36513010 36513276 -49475658 + AluJo SINE Alu 1 282 -30 30 0 0 0 chr18 36513276 36513306 -49475628 + AT_rich Low_complexity Low_complexity 1 30 0 502 105 53 0 chr18 36513895 36513971 -49474963 + MADE1 DNA Mariner 1 80 0 433 279 80 24 chr18 36513971 36514175 -49474759 - MIR SINE MIR -30 232 19 1156 189 5 19 chr18 36514282 36514488 -49474446 - MER58A DNA MER1_type -1 223 21 1600 271 160 10 chr18 36514638 36515599 -49473335 - L2 LINE L2 -50 3263 2138 408 228 146 8 chr18 36516404 36516527 -49472407 + MER117 DNA MER1_type 8 147 -50 288 0 0 0 chr18 36517366 36517398 -49471536 + (TGAG)n Simple_repeat Simple_repeat 1 32 0 419 208 250 33 chr18 36518011 36518223 -49470711 - LTR41 LTR ERVL -6 767 510 736 183 18 47 chr18 36518584 36518753 -49470181 - LTR41 LTR ERVL -609 164 1 330 242 33 83 chr18 36519329 36519449 -49469485 - MER5B DNA MER1_type -60 118 5 888 172 32 48 chr18 36520171 36520357 -49468577 + MER5A DNA MER1_type 6 188 -1 263 194 125 0 chr18 36520602 36520674 -49468260 + MER5A DNA MER1_type 14 94 -95 1511 104 40 5 chr18 36521620 36521741 -49467193 + MER30 DNA MER1_type 1 135 -95 2638 13 0 10 chr18 36521741 36522048 -49466886 + AluY SINE Alu 1 304 -7 1511 104 40 5 chr18 36522048 36522148 -49466786 + MER30 DNA MER1_type 135 230 0 2182 98 3 31 chr18 36523082 36523400 -49465534 + AluSq SINE Alu 1 309 -4 300 289 21 31 chr18 36524439 36524536 -49464398 + MIR SINE MIR 33 128 -80 870 236 42 64 chr18 36524672 36524985 -49463949 + L2 LINE L2 3008 3313 0 1768 123 0 120 chr18 36525070 36525403 -49463531 + AluJb SINE Alu 5 297 -5 809 169 0 0 chr18 36525405 36525535 -49463399 + AluJo/FRAM SINE Alu 137 266 -46 272 313 84 45 chr18 36526034 36526213 -49462721 - L2 LINE L2 -92 3180 2995 2303 72 3 0 chr18 36526213 36526505 -49462429 + AluSg SINE Alu 1 293 -17 713 214 26 44 chr18 36527000 36527229 -49461705 - Charlie2 DNA MER1_type 0 2862 2638 333 0 0 0 chr18 36527285 36527322 -49461612 + (TG)n Simple_repeat Simple_repeat 2 38 0 243 61 0 0 chr18 36527324 36527357 -49461577 + (GA)n Simple_repeat Simple_repeat 2 34 0 218 238 0 0 chr18 36527399 36527441 -49461493 + (TA)n Simple_repeat Simple_repeat 2 43 0 894 219 11 35 chr18 36527441 36527701 -49461233 - Charlie2 DNA MER1_type -251 2611 2358 825 174 0 14 chr18 36527701 36527845 -49461089 - FLAM_C SINE Alu 0 143 2 623 262 69 15 chr18 36527847 36528279 -49460655 - Charlie2 DNA MER1_type -513 2349 1857 388 245 36 65 chr18 36528373 36528512 -49460422 - Charlie2 DNA MER1_type -2590 192 58 1955 122 3 26 chr18 36528702 36529006 -49459928 - AluSp SINE Alu -16 297 1 2234 92 0 19 chr18 36529006 36529319 -49459615 - AluSx SINE Alu -4 308 1 1756 257 42 33 chr18 36530645 36531197 -49457737 - MLT1G LTR MaLR -2 588 32 708 215 200 0 chr18 36531446 36531651 -49457283 - MIR SINE MIR -8 254 9 360 0 0 0 chr18 36532086 36532126 -49456808 + (T)n Simple_repeat Simple_repeat 1 40 0 22 0 0 0 chr18 36532149 36532171 -49456763 + GC_rich Low_complexity Low_complexity 1 22 0 1995 122 7 3 chr18 36533357 36533652 -49455282 + AluSq SINE Alu 1 296 -17 21 0 0 0 chr18 36533723 36533744 -49455190 + AT_rich Low_complexity Low_complexity 1 21 0 384 353 34 65 chr18 36533900 36534192 -49454742 - L1ME4a LINE L1 -280 5841 5559 713 204 7 7 chr18 36534518 36534660 -49454274 - Zaphod DNA AcHobo 0 4031 3890 1090 300 102 9 chr18 36534776 36535119 -49453815 - MER115 DNA AcHobo -318 375 1 2043 257 60 40 chr18 36535126 36535281 -49453653 + HAL1 LINE L1 659 809 -1698 2177 122 0 0 chr18 36535281 36535593 -49453341 - AluSx SINE Alu 0 312 1 2043 257 60 40 chr18 36535593 36536251 -49452683 + HAL1 LINE L1 809 1494 -1013 2026 163 21 3 chr18 36536251 36536588 -49452346 + MER2 DNA MER2_type 1 343 -1 2043 257 60 40 chr18 36536588 36536690 -49452244 + HAL1 LINE L1 1494 1593 -914 972 267 56 67 chr18 36536695 36537144 -49451790 + MLT1H LTR MaLR 1 408 -147 2305 78 0 0 chr18 36537273 36537568 -49451366 - AluY SINE Alu -16 295 1 1671 152 50 58 chr18 36537578 36537921 -49451013 - L1PA16 LINE L1 -16 6150 5811 233 346 31 23 chr18 36537981 36538111 -49450823 - MLT1-int LTR MaLR -506 865 735 715 168 0 0 chr18 36538251 36538364 -49450570 - FRAM SINE Alu -17 159 47 225 114 0 29 chr18 36538404 36538439 -49450495 - Alu SINE Alu -266 34 1 1138 230 7 39 chr18 36538791 36539074 -49449860 - MLT1H LTR MaLR -275 274 1 454 272 73 21 chr18 36539080 36539271 -49449663 + HAL1 LINE L1 1612 1812 -695 607 247 147 37 chr18 36539311 36539692 -49449242 + HAL1 LINE L1 1916 2338 -169 279 317 67 88 chr18 36539970 36540389 -49448545 - L2 LINE L2 -36 3236 2827 664 247 29 11 chr18 36541493 36541667 -49447267 - MER45A DNA AcHobo -1 177 1 2232 80 14 83 chr18 36542308 36542671 -49446263 + MER1B DNA MER1_type 1 338 -1 2120 113 0 10 chr18 36544125 36544435 -49444499 + AluSq SINE Alu 1 307 -6 867 279 56 52 chr18 36544541 36544846 -49444088 + MER45C DNA AcHobo 293 598 -355 585 249 165 8 chr18 36544968 36545282 -49443652 - MLT1H LTR MaLR -178 417 35 1718 130 30 43 chr18 36545630 36545931 -49443003 - AluSx SINE Alu -15 297 1 427 267 29 0 chr18 36547878 36547983 -49440951 - MER63 DNA MER1_type 0 1062 955 686 205 16 0 chr18 36547984 36548106 -49440828 + FLAM_C SINE Alu 2 125 -18 28 48 0 0 chr18 36548110 36548152 -49440782 + AT_rich Low_complexity Low_complexity 1 42 0 1205 231 12 0 chr18 36548153 36548400 -49440534 - MER63 DNA MER1_type -104 957 708 1074 266 100 33 chr18 36549595 36549986 -49438948 - MLT1J2 LTR MaLR -14 436 20 729 233 22 100 chr18 36550090 36550361 -49438573 + MIR SINE MIR 8 257 -5 2202 98 0 13 chr18 36550373 36550679 -49438255 + AluSx SINE Alu 1 302 -10 920 97 0 0 chr18 36550699 36550823 -49438111 + AluSg/x SINE Alu 150 273 -39 959 164 0 0 chr18 36551803 36551955 -49436979 + AluJb SINE Alu 136 287 -25 613 120 0 0 chr18 36552344 36552436 -49436498 - AluSp/q SINE Alu -6 307 216 329 167 0 19 chr18 36552437 36552491 -49436443 - AluYb8 SINE Alu -133 175 123 1925 123 11 3 chr18 36552503 36552788 -49436146 - AluSx SINE Alu -25 287 1 640 338 83 23 chr18 36553446 36553748 -49435186 + L3 LINE CR1 348 667 -910 315 310 73 54 chr18 36553825 36554050 -49434884 - MIR SINE MIR -10 252 20 324 364 90 41 chr18 36554160 36554503 -49434431 - LTR67 LTR ERVL -175 382 23 22 35 0 0 chr18 36554506 36554535 -49434399 + AT_rich Low_complexity Low_complexity 1 29 0 625 165 18 18 chr18 36554535 36554644 -49434290 - AluJ SINE Alu -17 295 187 804 127 0 16 chr18 36554645 36554771 -49434163 - AluJ SINE Alu -171 141 18 240 140 211 18 chr18 36555370 36555427 -49433507 + MIR SINE MIR 79 146 -62 612 229 188 28 chr18 36555531 36555749 -49433185 + MIR SINE MIR 2 254 -8 195 200 18 36 chr18 36557193 36557248 -49431686 - MER5A DNA MER1_type -80 109 56 2214 106 3 3 chr18 36557258 36557570 -49431364 + AluSx SINE Alu 1 312 0 601 214 54 18 chr18 36557615 36557783 -49431151 + MER5B DNA MER1_type 5 178 0 291 148 16 33 chr18 36558599 36558660 -49430274 - MLT1J LTR MaLR -3 508 449 5285 150 39 34 chr18 36558697 36559829 -49429105 + L1MC2 LINE L1 5184 6320 -24 244 241 89 62 chr18 36560008 36560120 -49428814 - MLT1J LTR MaLR 0 511 397 226 300 17 0 chr18 36560455 36560515 -49428419 - MLT1L LTR MaLR -349 266 206 278 296 14 0 chr18 36560554 36560625 -49428309 - MLT1L LTR MaLR -540 75 4 1119 173 33 86 chr18 36560927 36561228 -49427706 + L1MB7 LINE L1 4964 5248 -898 1029 244 35 25 chr18 36561231 36561550 -49427384 + L1MB7 LINE L1 5850 6171 -13 674 240 74 23 chr18 36562250 36562425 -49426509 - MIR SINE MIR -2 260 77 360 83 0 0 chr18 36563525 36563573 -49425361 - MLT2B1 LTR ERVL 0 520 473 1721 162 43 43 chr18 36563578 36563948 -49424986 + THE1C LTR MaLR 1 370 -5 180 0 0 0 chr18 36563956 36563976 -49424958 + (TC)n Simple_repeat Simple_repeat 1 20 0 661 172 0 16 chr18 36563997 36564119 -49424815 - MLT2C2 LTR ERVL -50 414 295 887 275 38 12 chr18 36564324 36564467 -49424467 + MIR SINE MIR 17 170 -92 2129 104 57 33 chr18 36564467 36564833 -49424101 - THE1C LTR MaLR 0 375 1 887 275 38 12 chr18 36564833 36564929 -49424005 + MIR SINE MIR 170 262 0 306 333 128 36 chr18 36565005 36565224 -49423710 + L1M4 LINE L1 4124 4362 -1784 531 0 0 0 chr18 36565295 36565354 -49423580 + (CA)n Simple_repeat Simple_repeat 2 60 0 198 0 0 0 chr18 36565361 36565383 -49423551 + (GA)n Simple_repeat Simple_repeat 2 23 0 209 143 24 24 chr18 36565444 36565486 -49423448 + (TATATG)n Simple_repeat Simple_repeat 5 46 0 301 307 100 20 chr18 36565737 36565887 -49423047 + MIR SINE MIR 9 170 -92 2321 99 90 3 chr18 36567117 36567450 -49421484 - THE1B LTR MaLR -2 362 1 361 305 25 0 chr18 36572725 36572843 -49416091 + MER117 DNA MER1_type 1 121 -76 21 0 0 0 chr18 36574108 36574129 -49414805 + AT_rich Low_complexity Low_complexity 1 21 0 2147 110 0 10 chr18 36574528 36574838 -49414096 - AluSq SINE Alu -6 307 1 329 91 0 0 chr18 36576282 36576326 -49412608 + (TCCC)n Simple_repeat Simple_repeat 2 45 0 767 142 35 12 chr18 36576327 36576496 -49412438 + CT-rich Low_complexity Low_complexity 2 174 0 806 154 19 19 chr18 36578171 36578327 -49410607 - PABL_B LTR ERV1 0 667 512 320 264 44 11 chr18 36579262 36579353 -49409581 - MIR SINE MIR -112 150 57 655 279 44 35 chr18 36579480 36579706 -49409228 - MIR SINE MIR -27 235 8 433 253 76 38 chr18 36579778 36579936 -49408998 + MIR SINE MIR 23 186 -76 1938 97 76 3 chr18 36579936 36580224 -49408710 + AluY SINE Alu 1 309 -2 859 195 6 6 chr18 36580234 36580403 -49408531 + AluSq SINE Alu 130 298 -15 261 361 61 33 chr18 36580497 36580677 -49408257 + MIR SINE MIR 19 203 -59 261 0 0 0 chr18 36580715 36580744 -49408190 + (CCA)n Simple_repeat Simple_repeat 3 31 0 1947 127 3 17 chr18 36581218 36581518 -49407416 - AluSx SINE Alu -16 296 1 267 103 0 0 chr18 36584995 36585034 -49403900 + (GAA)n Simple_repeat Simple_repeat 2 40 0 323 242 31 129 chr18 36587391 36587585 -49401349 + MIR SINE MIR 23 197 -65 586 266 120 5 chr18 36587880 36588072 -49400862 + MIR SINE MIR 28 241 -21 182 255 59 20 chr18 36588099 36588150 -49400784 + L2 LINE L2 3255 3307 -6 1019 221 28 0 chr18 36589145 36589358 -49399576 - MER20 DNA MER1_type 0 219 1 848 269 66 79 chr18 36590338 36590780 -49398154 - L1MC4a LINE L1 -831 6977 6542 1011 81 0 0 chr18 36591024 36591148 -49397786 + AluY SINE Alu 172 295 -16 705 192 45 51 chr18 36591360 36591537 -49397397 + Charlie1b DNA MER1_type 79 254 -269 393 293 172 34 chr18 36591669 36592071 -49396863 - HAL1b LINE L1 -983 601 297 264 218 36 0 chr18 36593132 36593187 -49395747 - L1MD2 LINE L1 -37 6322 6266 779 253 41 46 chr18 36593339 36593714 -49395220 - MLT1J LTR MaLR -41 470 28 430 160 2 18 chr18 36594015 36594122 -49394812 - L1ME LINE L1 -485 5681 5587 420 153 97 0 chr18 36596080 36596152 -49392782 + MER5A DNA MER1_type 9 87 -102 1759 186 59 31 chr18 36596737 36597092 -49391842 + MLT1A1 LTR MaLR 1 365 0 360 262 65 54 chr18 36597164 36597332 -49391602 + MIR SINE MIR 21 190 -72 516 212 0 0 chr18 36597537 36597642 -49391292 - L1MD2 LINE L1 -446 5738 5644 21 36 0 0 chr18 36598085 36598113 -49390821 + AT_rich Low_complexity Low_complexity 1 28 0 351 0 0 0 chr18 36598138 36598177 -49390757 + (CA)n Simple_repeat Simple_repeat 2 40 0 368 222 26 43 chr18 36598188 36598305 -49390629 - MIR3 SINE MIR -90 118 4 392 255 59 59 chr18 36599388 36599541 -49389393 - MER5B DNA MER1_type -25 153 1 398 314 83 6 chr18 36599922 36600091 -49388843 + MIR SINE MIR 51 232 -30 342 239 0 0 chr18 36600215 36600286 -49388648 - MER5A DNA MER1_type -84 105 35 243 313 0 30 chr18 36600607 36600674 -49388260 + MER5B DNA MER1_type 114 178 0 314 0 0 47 chr18 36601709 36601752 -49387182 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 329 318 108 45 chr18 36603120 36603296 -49385638 - MIR SINE MIR -74 188 2 587 237 96 17 chr18 36603347 36603524 -49385410 + MIR SINE MIR 2 192 -70 449 281 126 60 chr18 36604978 36605295 -49383639 + L2 LINE L2 2934 3271 -1 4552 164 33 22 chr18 36605633 36606891 -49382043 - L1MB7 LINE L1 -14 6170 4892 1176 159 25 8 chr18 36609366 36609605 -49379329 - L1MB4 LINE L1 0 6180 5938 36 0 0 0 chr18 36609605 36609641 -49379293 + AT_rich Low_complexity Low_complexity 1 36 0 2321 92 0 7 chr18 36611665 36611960 -49376974 - AluSc SINE Alu -12 297 5 270 221 0 29 chr18 36612621 36612689 -49376245 + (CATATA)n Simple_repeat Simple_repeat 6 71 0 4389 68 7 4 chr18 36612695 36613240 -49375694 - L1PA13 LINE L1 -5 6158 5612 1763 155 7 10 chr18 36614263 36614554 -49374380 + AluJb SINE Alu 2 291 -21 22 0 0 0 chr18 36614810 36614832 -49374102 + AT_rich Low_complexity Low_complexity 1 22 0 1227 285 95 23 chr18 36617638 36618238 -49370696 - L1MC4a LINE L1 -1637 6171 5529 557 227 15 23 chr18 36620092 36620224 -49368710 + L2 LINE L2 3183 3313 0 2556 190 63 24 chr18 36620296 36620979 -49367955 + Tigger7 DNA MER2_type 1 2586 -1 2147 121 0 19 chr18 36621517 36621831 -49367103 - AluY SINE Alu -3 308 1 314 116 0 0 chr18 36623350 36623393 -49365541 - MLT2B3 LTR ERVL 0 554 512 426 39 0 0 chr18 36623393 36623445 -49365489 + (TG)n Simple_repeat Simple_repeat 1 52 0 2556 190 63 24 chr18 36623617 36624300 -49364634 + Tigger7 DNA MER2_type 1 2586 -1 2413 83 0 13 chr18 36624838 36625150 -49363784 - AluY SINE Alu -3 308 1 597 289 0 42 chr18 36625152 36625320 -49363614 - MIR SINE MIR -60 202 43 274 279 189 8 chr18 36625706 36625828 -49363106 - MIR SINE MIR -49 213 70 243 0 0 0 chr18 36626233 36626260 -49362674 + (A)n Simple_repeat Simple_repeat 1 27 0 244 369 20 77 chr18 36626430 36626728 -49362206 + L2 LINE L2 2992 3272 0 204 40 0 0 chr18 36627543 36627568 -49361366 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 2240 88 3 3 chr18 36629169 36629463 -49359471 - AluSp SINE Alu -19 294 1 23 33 0 0 chr18 36629467 36629497 -49359437 + AT_rich Low_complexity Low_complexity 1 30 0 383 313 212 39 chr18 36629897 36630482 -49358452 + L3 LINE CR1 673 1358 -219 274 274 0 0 chr18 36630525 36630587 -49358347 + L3 LINE CR1 1506 1567 -10 24 0 0 0 chr18 36631247 36631271 -49357663 + AT_rich Low_complexity Low_complexity 1 24 0 1300 198 75 4 chr18 36631990 36632242 -49356692 - MLT1E1 LTR MaLR -384 270 1 449 224 69 0 chr18 36632499 36632615 -49356319 + MER5C DNA MER1_type 1 124 -200 869 221 20 88 chr18 36632785 36633079 -49355855 - L1ME1 LINE L1 -6 6160 5887 * 2921 219 80 28 chr18 36633064 36633936 -49354998 - L1ME1 LINE L1 -1032 5114 4197 371 161 84 84 chr18 36635188 36635331 -49353603 - L1M4 LINE L1 -1434 4712 4570 1252 164 4 13 chr18 36636051 36636276 -49352658 - AluSc SINE Alu 0 309 87 369 233 221 12 chr18 36636414 36636586 -49352348 + MER5C DNA MER1_type 117 324 0 2409 104 0 0 chr18 36636600 36636908 -49352026 - AluSc SINE Alu -1 308 1 2710 193 58 26 chr18 36638427 36638468 -49350466 - MLT2B3 LTR ERVL 0 554 516 453 36 0 0 chr18 36638468 36638523 -49350411 + (TG)n Simple_repeat Simple_repeat 2 56 0 2710 193 58 26 chr18 36638523 36639015 -49349919 - MLT2B3 LTR ERVL -38 516 4 468 177 8 24 chr18 36639054 36639155 -49349779 - MER5A DNA MER1_type -86 103 5 214 337 32 21 chr18 36640031 36640126 -49348808 + L2 LINE L2 3201 3296 -17 21 0 0 0 chr18 36641357 36641378 -49347556 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr18 36641510 36641542 -49347392 + AT_rich Low_complexity Low_complexity 1 32 0 8139 199 74 47 chr18 36641544 36642916 -49346018 - L1MC4a LINE L1 0 7808 6351 1916 73 49 0 chr18 36642916 36643162 -49345772 + AluY SINE Alu 47 304 -7 8139 199 74 47 chr18 36643162 36643982 -49344952 - L1MC4a LINE L1 -1457 6351 5555 268 341 16 16 chr18 36645202 36645331 -49343603 - Tigger1 DNA MER2_type -1252 1166 1038 2119 76 7 0 chr18 36648880 36649156 -49339778 - L1PB1 LINE L1 -9 6142 5865 411 21 0 0 chr18 36649386 36649434 -49339500 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 1993 146 0 16 chr18 36649456 36649772 -49339162 + AluJo SINE Alu 1 311 -1 25 0 0 0 chr18 36649819 36649844 -49339090 + AT_rich Low_complexity Low_complexity 1 25 0 2272 144 22 3 chr18 36651394 36651762 -49337172 - L1MB1 LINE L1 -11 6157 5783 218 119 48 0 chr18 36651763 36651805 -49337129 + (TATG)n Simple_repeat Simple_repeat 3 46 0 551 185 59 110 chr18 36651805 36652005 -49336929 - L1PB1 LINE L1 -352 5814 5629 282 100 0 20 chr18 36652005 36652055 -49336879 + L1PB1 LINE L1 5565 5613 -721 27 0 0 0 chr18 36652924 36652951 -49335983 + AT_rich Low_complexity Low_complexity 1 27 0 233 387 0 6 chr18 36653161 36653334 -49335600 + (CA)n Simple_repeat Simple_repeat 1 172 0 679 261 135 36 chr18 36653340 36653643 -49335291 - HAL1 LINE L1 -285 2222 1890 335 290 107 27 chr18 36653707 36653931 -49335003 - HAL1 LINE L1 -2096 411 170 258 192 0 0 chr18 36653986 36654038 -49334896 + HAL1 LINE L1 91 142 -2365 23 54 0 0 chr18 36654586 36654623 -49334311 + AT_rich Low_complexity Low_complexity 1 37 0 180 0 0 0 chr18 36657171 36657191 -49331743 + (GGAA)n Simple_repeat Simple_repeat 2 21 0 198 0 0 0 chr18 36657613 36657635 -49331299 + (T)n Simple_repeat Simple_repeat 1 22 0 180 230 95 54 chr18 36658123 36658197 -49330737 + MIR3 SINE MIR 108 184 -24 252 86 0 0 chr18 36658277 36658312 -49330622 + (T)n Simple_repeat Simple_repeat 1 35 0 1703 146 22 15 chr18 36660053 36660321 -49328613 - AluJb SINE Alu -42 270 1 3982 218 165 21 chr18 36662514 36663898 -49325036 + L1M4 LINE L1 2171 3753 -2393 2016 142 0 0 chr18 36664154 36664483 -49324451 - AluSx SINE Alu 0 330 2 298 336 8 0 chr18 36665188 36665307 -49323627 - L2 LINE L2 -508 2806 2687 519 292 0 19 chr18 36665693 36665854 -49323080 - MIR SINE MIR -104 158 1 201 275 116 0 chr18 36665854 36665912 -49323022 + L2 LINE L2 3242 3307 -6 495 161 110 34 chr18 36666682 36666800 -49322134 + L1MC2 LINE L1 6174 6300 -44 814 114 24 66 chr18 36667265 36667431 -49321503 + L1MC2 LINE L1 5711 5869 -475 2318 143 35 35 chr18 36667489 36667944 -49320990 + L1MC2 LINE L1 5874 6328 -16 214 377 88 19 chr18 36668384 36668543 -49320391 - L2 LINE L2 -1 3271 3102 1377 186 116 0 chr18 36669633 36669891 -49319043 - AluJb SINE Alu -20 292 5 184 281 16 0 chr18 36671892 36671956 -49316978 + MIR SINE MIR 62 126 -136 2061 244 85 24 chr18 36671971 36672627 -49316307 + L1ME2 LINE L1 5460 6155 -9 1002 177 0 0 chr18 36672784 36672948 -49315986 + FRAM SINE Alu 1 164 -2 391 218 164 61 chr18 36675221 36675386 -49313548 - MER5A DNA MER1_type -7 182 1 333 0 0 0 chr18 36676414 36676451 -49312483 + (TC)n Simple_repeat Simple_repeat 2 38 0 303 49 0 0 chr18 36676450 36676491 -49312443 + (TG)n Simple_repeat Simple_repeat 2 42 0 * 758 252 45 20 chr18 36676917 36677163 -49311771 + L2 LINE L2 3031 3282 -31 198 0 0 0 chr18 36678267 36678289 -49310645 + (A)n Simple_repeat Simple_repeat 1 22 0 267 333 0 23 chr18 36680571 36680658 -49308276 - L2 LINE L2 -548 2766 2682 1721 91 73 11 chr18 36680753 36681028 -49307906 + L1MA2 LINE L1 6013 6304 0 654 79 0 0 chr18 36681693 36681782 -49307152 + (TAGG)n Simple_repeat Simple_repeat 1 89 0 429 70 0 0 chr18 36681781 36681838 -49307096 + (TGGA)n Simple_repeat Simple_repeat 1 57 0 * 447 68 0 0 chr18 36683503 36683562 -49305372 + (TG)n Simple_repeat Simple_repeat 2 60 0 483 18 0 0 chr18 36684275 36684331 -49304603 + (TG)n Simple_repeat Simple_repeat 2 57 0 384 198 0 45 chr18 36685848 36685885 -49303049 - MER5A DNA MER1_type -80 109 72 2168 96 4 0 chr18 36685885 36686157 -49302777 - AluSx SINE Alu -19 293 21 384 198 0 45 chr18 36686157 36686230 -49302704 - MER5A DNA MER1_type -117 72 4 2764 146 23 10 chr18 36686437 36686922 -49302012 + L1MB7 LINE L1 5694 6184 0 211 229 21 0 chr18 36688937 36688985 -49299949 - MIR3 SINE MIR -50 158 110 319 259 24 12 chr18 36688995 36689080 -49299854 - L2 LINE L2 0 3313 3228 207 264 41 66 chr18 36690311 36690432 -49298502 + L2 LINE L2 3118 3235 -78 249 282 96 69 chr18 36690576 36690764 -49298170 + MIR3 SINE MIR 7 199 -9 263 326 129 0 chr18 36691637 36691769 -49297165 - MIR SINE MIR -72 190 42 4285 165 29 23 chr18 36692302 36693073 -49295861 + LTR39 LTR ERV1 1 775 -8 320 287 19 0 chr18 36693565 36693673 -49295261 - MER117 DNA MER1_type -87 110 1 2058 103 31 0 chr18 36694008 36694300 -49294634 - AluSx SINE Alu -11 301 1 21 57 0 0 chr18 36694332 36694367 -49294567 + AT_rich Low_complexity Low_complexity 1 35 0 1699 151 18 3 chr18 36695552 36695836 -49293098 + AluJb SINE Alu 1 288 -24 105 17 0 0 chr18 36695836 36695955 -49292979 + AT_rich Low_complexity Low_complexity 1 119 0 3346 184 118 5 chr18 36696638 36697381 -49291553 - L1MC2 LINE L1 -1 7763 6180 226 306 166 19 chr18 36697654 36697811 -49291123 + MIR SINE MIR 54 233 -29 449 349 40 6 chr18 36698782 36698957 -49289977 + MIR3 SINE MIR 7 187 -21 183 42 0 0 chr18 36699250 36699274 -49289660 + (TG)n Simple_repeat Simple_repeat 2 25 0 1992 90 4 0 chr18 36699303 36699571 -49289363 - AluY SINE Alu -22 289 21 1220 204 3 67 chr18 36699573 36699872 -49289062 - AluJo SINE Alu -17 295 16 427 226 85 19 chr18 36700258 36700364 -49288570 + L2 LINE L2 3160 3272 0 447 68 0 0 chr18 36701532 36701591 -49287343 + (TG)n Simple_repeat Simple_repeat 2 60 0 184 338 81 0 chr18 36701613 36701687 -49287247 - MIR3 SINE MIR -27 181 102 2163 73 10 10 chr18 36702995 36703298 -49285636 + AluY SINE Alu 1 303 -8 2075 113 3 0 chr18 36704123 36704415 -49284519 + AluSx SINE Alu 6 298 -14 237 333 0 0 chr18 36704423 36704495 -49284439 - L2 LINE L2 0 3313 3242 3246 206 27 58 chr18 36704628 36705740 -49283194 - L1ME1 LINE L1 -9 6157 5083 21 0 0 0 chr18 36706645 36706666 -49282268 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr18 36706798 36706830 -49282104 + AT_rich Low_complexity Low_complexity 1 32 0 5490 200 73 35 chr18 36706832 36708199 -49280735 - L1MC4a LINE L1 0 7808 6390 1667 92 54 0 chr18 36708204 36708444 -49280490 + AluY SINE Alu 47 299 -12 827 209 7 0 chr18 36710873 36711026 -49277908 - FRAM SINE Alu -23 153 1 638 235 149 20 chr18 36711026 36711388 -49277546 + MER74C LTR ERVL 21 523 -35 2198 88 3 3 chr18 36712109 36712415 -49276519 + AluY SINE Alu 1 306 -5 2260 52 0 7 chr18 36713318 36713606 -49275328 + AluY SINE Alu 1 286 -25 329 187 115 43 chr18 36713741 36713880 -49275054 + L1ME4a LINE L1 5973 6121 0 479 262 94 55 chr18 36715072 36715274 -49273660 - MIR SINE MIR -21 241 32 330 311 22 37 chr18 36715326 36715461 -49273473 - MIR SINE MIR -71 191 59 1241 103 87 0 chr18 36716463 36716648 -49272286 - AluSg/x SINE Alu -28 284 84 2296 77 0 3 chr18 36716733 36717033 -49271901 - AluSg1 SINE Alu -10 299 1 3756 51 8 8 chr18 36718545 36719014 -49269920 - L1PA7 LINE L1 0 6154 5686 321 247 41 24 chr18 36719211 36719361 -49269573 - L1ME LINE L1 -332 5838 5687 1821 154 14 0 chr18 36720240 36720520 -49268414 - AluSx SINE Alu -28 284 1 3054 41 6 3 chr18 36720683 36721084 -49267850 + L1PA3 LINE L1 5784 6185 0 15416 129 48 27 chr18 36721109 36723783 -49265151 + Tigger4(Zombi) DNA MER2_type 1 2731 0 2837 228 76 79 chr18 36724496 36725568 -49263366 + L1MC5 LINE L1 6542 7628 -333 1462 65 0 0 chr18 36725568 36725753 -49263181 + AluY SINE Alu 127 311 0 2837 228 76 79 chr18 36725753 36726071 -49262863 + L1MC5 LINE L1 7628 7945 -16 195 42 0 0 chr18 36727656 36727680 -49261254 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 405 246 72 30 chr18 36727733 36727900 -49261034 - MER5B DNA MER1_type 0 178 5 258 223 250 27 chr18 36727911 36728023 -49260911 - MER5A DNA MER1_type -26 163 27 187 347 53 0 chr18 36729244 36729339 -49259595 - MER5A DNA MER1_type -31 158 59 369 164 27 0 chr18 36729529 36729602 -49259332 + MER116 DNA Mariner 1 75 -5 225 226 118 69 chr18 36729602 36729704 -49259230 - MIR SINE MIR -111 151 45 2361 63 0 3 chr18 36730302 36730605 -49258329 - AluY SINE Alu -9 302 1 2198 88 3 3 chr18 36731507 36731813 -49257121 - AluY SINE Alu -5 306 1 638 235 149 20 chr18 36732532 36732894 -49256040 - MER74C LTR ERVL -35 523 21 827 209 7 0 chr18 36732894 36733047 -49255887 + FRAM SINE Alu 1 153 -23 247 307 11 23 chr18 36733601 36733689 -49255245 - L2 LINE L2 -9 3263 3177 202 304 89 0 chr18 36733969 36734025 -49254909 - MIR3 SINE MIR -23 185 125 453 175 42 50 chr18 36734026 36734146 -49254788 + Charlie8 DNA MER1_type 40 158 -2259 514 191 71 28 chr18 36734852 36734993 -49253941 + Charlie8 DNA MER1_type 9 155 -2262 1653 179 3 13 chr18 36736242 36736555 -49252379 - AluJo SINE Alu -2 310 1 423 213 0 0 chr18 36736709 36736789 -49252145 + MER116 DNA Mariner 1 80 0 186 367 68 43 chr18 36737568 36738097 -49250837 + L2 LINE L2 2244 2785 -529 236 341 119 8 chr18 36738264 36738390 -49250544 + L2 LINE L2 2995 3134 -138 429 307 29 0 chr18 36739675 36739815 -49249119 + MER117 DNA MER1_type 1 144 -53 431 211 158 0 chr18 36739963 36740077 -49248857 + L3 LINE CR1 1444 1575 -2 2139 129 0 3 chr18 36740295 36740605 -49248329 + AluSx SINE Alu 1 309 -3 1365 248 120 40 chr18 36741312 36741861 -49247073 + MLT1E LTR MaLR 1 593 0 1654 131 95 11 chr18 36742725 36742999 -49245935 - AluSx SINE Alu -15 297 1 204 209 0 23 chr18 36744390 36744433 -49244501 + L2 LINE L2 3211 3252 -20 2140 76 66 0 chr18 36745834 36746122 -49242812 + AluSx SINE Alu 1 307 -5 398 311 121 28 chr18 36746550 36746798 -49242136 + L2 LINE L2 3043 3313 0 735 250 54 28 chr18 36746809 36747089 -49241845 - L1ME3A LINE L1 -308 5862 5569 472 331 21 0 chr18 36747343 36747488 -49241446 - MIR3 SINE MIR -12 196 49 308 331 30 8 chr18 36749481 36749614 -49239320 + MIR SINE MIR 106 241 -21 461 332 141 22 chr18 36750195 36750514 -49238420 - L3 LINE CR1 -3 1574 1218 684 115 0 0 chr18 36750753 36750915 -49238019 - AluJb SINE Alu 0 351 190 33 25 0 0 chr18 36751977 36752017 -49236917 + AT_rich Low_complexity Low_complexity 1 40 0 22 56 0 0 chr18 36752046 36752082 -49236852 + AT_rich Low_complexity Low_complexity 1 36 0 1718 212 16 11 chr18 36752113 36752495 -49236439 - MER58D DNA MER1_type -2 384 1 187 244 73 37 chr18 36752658 36752740 -49236194 - L3 LINE CR1 -866 711 627 752 254 55 0 chr18 36753681 36753862 -49235072 + L1MD2 LINE L1 515 705 -5835 3025 208 65 20 chr18 36753885 36754798 -49234136 + L1MD2 LINE L1 2761 3714 -2826 1023 252 173 21 chr18 36754863 36755353 -49233581 + L1MD2 LINE L1 6132 6739 -14 223 324 7 55 chr18 36755413 36755558 -49233376 + L3 LINE CR1 964 1101 -476 243 276 20 51 chr18 36755633 36755731 -49233203 + L3 LINE CR1 1245 1339 -238 2317 90 3 0 chr18 36757266 36757577 -49231357 + AluSx SINE Alu 1 312 0 1130 163 214 16 chr18 36757594 36757846 -49231088 + AluJo SINE Alu 1 302 0 208 239 7 167 chr18 36758095 36758233 -49230701 - L3b LINE CR1 -18 1565 1450 1341 227 37 53 chr18 36759175 36759564 -49229370 + MLT2D LTR ERVL 1 485 -35 315 175 0 0 chr18 36759609 36759666 -49229268 + MLT2D LTR ERVL 464 520 0 244 235 0 0 chr18 36761393 36761444 -49227490 + CT-rich Low_complexity Low_complexity 1 51 0 743 225 91 54 chr18 36761456 36761732 -49227202 - L2 LINE L2 -5 3308 3023 948 100 15 0 chr18 36763740 36763870 -49225064 - AluSq/x SINE Alu -181 132 1 2126 111 3 0 chr18 36764210 36764507 -49224427 + AluSx SINE Alu 1 298 -14 237 333 0 0 chr18 36764515 36764587 -49224347 - L2 LINE L2 0 3313 3242 3220 222 20 65 chr18 36764723 36765832 -49223102 - L1ME1 LINE L1 -9 6157 5118 2240 86 0 35 chr18 36765832 36766147 -49222787 - AluY SINE Alu -7 304 1 3220 222 20 65 chr18 36766147 36766370 -49222564 - L1ME1 LINE L1 -1048 5118 4886 427 226 85 19 chr18 36767208 36767314 -49221620 + L2 LINE L2 3160 3272 0 447 68 0 0 chr18 36768482 36768541 -49220393 + (TG)n Simple_repeat Simple_repeat 2 60 0 184 338 81 0 chr18 36768563 36768637 -49220297 - MIR3 SINE MIR -27 181 102 2163 73 10 10 chr18 36769945 36770248 -49218686 + AluY SINE Alu 1 303 -8 2181 86 0 0 chr18 36771070 36771380 -49217554 + AluY SINE Alu 3 312 0 189 74 0 0 chr18 36771415 36771442 -49217492 + (TTA)n Simple_repeat Simple_repeat 1 27 0 2118 79 0 85 chr18 36772311 36772651 -49216283 + AluY SINE Alu 1 311 0 359 188 116 36 chr18 36772761 36772899 -49216035 + L1ME4a LINE L1 5973 6121 0 479 262 94 55 chr18 36774091 36774293 -49214641 - MIR SINE MIR -21 241 32 330 311 22 37 chr18 36774345 36774480 -49214454 - MIR SINE MIR -71 191 59 237 288 50 0 chr18 36774984 36775064 -49213870 + L2 LINE L2 3189 3272 0 889 309 203 26 chr18 36775404 36776559 -49212375 + L2 LINE L2 1711 2660 -653 2040 124 3 3 chr18 36776559 36776857 -49212077 - AluSx SINE Alu -14 298 1 889 309 203 26 chr18 36776857 36776868 -49212066 + L2 LINE L2 2660 2668 -645 1645 166 3 21 chr18 36776868 36777158 -49211776 - AluJo SINE Alu -27 285 1 889 309 203 26 chr18 36777158 36777275 -49211659 + L2 LINE L2 2668 3228 -85 345 236 150 57 chr18 36779060 36779200 -49209734 + L3 LINE CR1 1423 1575 -2 1920 93 4 0 chr18 36781026 36781284 -49207650 - AluSp SINE Alu -54 259 1 384 268 32 32 chr18 36781435 36781679 -49207255 + MER41B LTR ERV1 54 430 -205 2065 86 24 14 chr18 36782014 36782305 -49206629 + AluSg SINE Alu 1 294 -16 303 292 49 7 chr18 36783634 36783778 -49205156 + L1ME4a LINE L1 5719 5868 -253 494 193 105 0 chr18 36784012 36784126 -49204808 - FLAM_A SINE Alu -6 127 2 846 273 51 48 chr18 36784434 36784666 -49204268 + L1MCc LINE L1 54 289 -6134 1737 161 0 13 chr18 36784666 36785000 -49203934 + AluJb SINE Alu 1 312 0 846 273 51 48 chr18 36785000 36785181 -49203753 + L1MCc LINE L1 289 468 -5955 189 235 0 0 chr18 36785432 36785466 -49203468 - MIR SINE MIR -106 156 123 799 329 133 14 chr18 36785553 36786036 -49202898 + L3 LINE CR1 473 1012 -565 187 325 128 34 chr18 36786078 36786195 -49202739 + L3 LINE CR1 1134 1261 -316 273 262 29 29 chr18 36788834 36788937 -49199997 + CT-rich Low_complexity Low_complexity 6 108 0 1190 171 136 68 chr18 36788938 36789307 -49199627 - MSTD LTR MaLR -2 394 1 2745 83 17 6 chr18 36790295 36790655 -49198279 + THE1B LTR MaLR 1 364 0 305 319 35 50 chr18 36791101 36791193 -49197741 + MIR SINE MIR 124 217 -45 1720 170 11 7 chr18 36791193 36791477 -49197457 + AluSx SINE Alu 1 305 0 181 0 0 0 chr18 36791477 36791497 -49197437 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 305 319 35 50 chr18 36791497 36791543 -49197391 + MIR SINE MIR 217 262 0 232 175 18 35 chr18 36791582 36791639 -49197295 + (CATATA)n Simple_repeat Simple_repeat 3 58 0 2173 101 0 36 chr18 36791687 36791993 -49196941 - AluY SINE Alu -16 295 1 812 253 5 23 chr18 36791996 36792217 -49196717 - L1MEc LINE L1 -1044 5171 4955 203 122 0 24 chr18 36792333 36792374 -49196560 + (TA)n Simple_repeat Simple_repeat 1 40 0 4359 218 85 11 chr18 36792403 36793617 -49195317 - L1MEc LINE L1 -1301 4914 3612 22 0 0 0 chr18 36793617 36793639 -49195295 + AT_rich Low_complexity Low_complexity 1 22 0 15133 42 2 7 chr18 36793639 36794632 -49194302 - L1P LINE L1 -988 5158 4175 2595 74 0 0 chr18 36794632 36794943 -49193991 - AluY SINE Alu 0 311 1 15133 42 2 7 chr18 36794943 36795801 -49193133 - L1P LINE L1 -1971 4175 3315 7708 51 3 1 chr18 36795801 36796792 -49192142 + L1PA5 LINE L1 5162 6154 0 3843 229 70 26 chr18 36796792 36798365 -49190569 - L1MEc LINE L1 -2562 3653 2048 374 133 24 96 chr18 36798365 36798448 -49190486 + Tigger2 DNA MER2_type 1 77 -2641 708 271 11 11 chr18 36798472 36798653 -49190281 - MER8 DNA MER2_type -58 181 1 3520 267 81 59 chr18 36798658 36800637 -49188297 - L1MEc LINE L1 -4352 2044 23 426 290 72 18 chr18 36800667 36800888 -49188046 + L1ME4a LINE L1 5602 5834 -287 876 241 40 0 chr18 36801823 36802022 -49186912 - MER69 DNA AcHobo -2306 220 14 221 313 52 43 chr18 36802501 36802616 -49186318 - MIR SINE MIR -135 127 12 203 250 36 18 chr18 36802740 36802796 -49186138 + L2 LINE L2 3213 3269 -3 201 132 0 0 chr18 36802972 36803010 -49185924 + (T)n Simple_repeat Simple_repeat 1 38 0 786 184 46 41 chr18 36803039 36803235 -49185699 - MER106A DNA MER1_type 0 236 40 797 201 92 0 chr18 36803696 36803907 -49185027 - L1MB4 LINE L1 0 6180 5945 639 0 0 0 chr18 36804103 36804174 -49184760 + (TATTG)n Simple_repeat Simple_repeat 2 72 0 2192 112 0 0 chr18 36804174 36804460 -49184474 - AluSx SINE Alu -26 286 1 247 314 27 65 chr18 36804915 36805100 -49183834 + MER5B DNA MER1_type 1 178 0 199 364 39 0 chr18 36805548 36805625 -49183309 - MIR3 SINE MIR -24 184 105 180 299 0 45 chr18 36805956 36806023 -49182911 + L2 LINE L2 3025 3088 -184 25 31 0 0 chr18 36808441 36808473 -49180461 + AT_rich Low_complexity Low_complexity 1 32 0 293 364 74 35 chr18 36808786 36809044 -49179890 - L2 LINE L2 -649 2665 2398 187 208 0 42 chr18 36809401 36809473 -49179461 + GA-rich Low_complexity Low_complexity 3 71 0 1509 146 0 55 chr18 36810186 36810439 -49178495 + AluSx SINE Alu 1 239 -73 767 222 66 0 chr18 36810539 36810706 -49178228 + AluSg/x SINE Alu 135 312 0 1258 256 37 67 chr18 36810974 36811466 -49177468 + L1MDb LINE L1 782 1258 -5151 * 8292 237 84 31 chr18 36811458 36814291 -49174643 + L1M4 LINE L1 2110 5092 -1054 363 264 35 49 chr18 36814400 36814544 -49174390 - MIR SINE MIR -62 200 59 1561 197 7 3 chr18 36815674 36815964 -49172970 + AluJb SINE Alu 3 293 -19 250 303 35 55 chr18 36816153 36816298 -49172636 - L1ME LINE L1 -394 5727 5586 419 247 102 30 chr18 36816333 36816499 -49172435 + MIR SINE MIR 63 240 -22 383 225 99 56 chr18 36816499 36816730 -49172204 - L1ME LINE L1 -535 5586 5378 2191 133 0 9 chr18 36817305 36817620 -49171314 - AluSx SINE Alu 0 312 1 449 223 80 34 chr18 36817769 36817944 -49170990 + L1ME4a LINE L1 5937 6119 -2 2135 108 28 0 chr18 36819170 36819456 -49169478 + AluSg SINE Alu 1 294 -16 232 175 18 35 chr18 36819504 36819561 -49169373 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 2314 109 0 0 chr18 36821401 36821704 -49167230 - AluSx SINE Alu -9 303 1 855 108 0 0 chr18 36821849 36821978 -49166956 + (TCC)n Simple_repeat Simple_repeat 1 129 0 1745 116 0 0 chr18 36822535 36822768 -49166166 + AluSx SINE Alu 11 243 -69 216 229 307 36 chr18 36824517 36824657 -49164277 + L2 LINE L2 3083 3260 -12 1447 161 10 39 chr18 36824658 36824968 -49163966 + AluSq SINE Alu 1 301 -12 1735 158 14 3 chr18 36825016 36825301 -49163633 + L1PA13 LINE L1 5873 6160 -3 1522 55 22 0 chr18 36825336 36825517 -49163417 + AluY SINE Alu 1 185 -126 640 81 0 0 chr18 36825517 36825604 -49163330 + AluY SINE Alu 218 304 -7 1606 202 92 45 chr18 36826082 36826528 -49162406 + MLT1C LTR MaLR 1 467 0 45 0 0 18 chr18 36826783 36826820 -49162114 + AT_rich Low_complexity Low_complexity 1 38 -17 2072 123 0 0 chr18 36826820 36827105 -49161829 - AluSx SINE Alu -27 285 1 45 0 0 18 chr18 36827105 36827123 -49161811 + AT_rich Low_complexity Low_complexity 38 55 0 942 76 38 8 chr18 36828847 36828979 -49159955 - MER85 DNA T2_type -1 138 3 1534 180 163 31 chr18 36829495 36829845 -49159089 - MSTD LTR MaLR 0 396 1 6439 233 99 24 chr18 36829845 36831458 -49157476 - MSTD-int LTR MaLR 0 1735 2 1689 195 91 32 chr18 36831460 36831834 -49157100 - MSTD LTR MaLR 0 396 1 1168 256 65 47 chr18 36831834 36832283 -49156651 - L1ME1 LINE L1 -35 6131 5675 2122 140 0 6 chr18 36832900 36833214 -49155720 - AluSx SINE Alu 0 312 1 1334 170 86 20 chr18 36834545 36835097 -49153837 - MLT1E1 LTR MaLR -4 650 1 682 221 67 0 chr18 36835484 36835633 -49153301 + MER5A DNA MER1_type 31 189 0 2766 212 69 12 chr18 36835772 36836569 -49152365 - MER45B DNA AcHobo 0 1040 174 1886 153 11 3 chr18 36836988 36837275 -49151659 - AluSq SINE Alu -24 289 1 4639 174 28 9 chr18 36837314 36838143 -49150791 - L1MB7 LINE L1 -31 6153 5303 2386 94 3 3 chr18 36838143 36838452 -49150482 - AluSp SINE Alu -4 309 1 4639 174 28 9 chr18 36838452 36838562 -49150372 - L1MB7 LINE L1 -881 5303 5197 791 260 102 47 chr18 36838623 36839046 -49149888 - L1ME4a LINE L1 -5 6116 5671 579 249 120 29 chr18 36840640 36840881 -49148053 - L1ME3A LINE L1 -221 5949 5687 324 0 0 0 chr18 36840886 36840922 -49148012 + (TG)n Simple_repeat Simple_repeat 1 36 0 455 309 89 10 chr18 36841116 36841561 -49147373 - L1M4 LINE L1 -2636 3510 3026 261 245 0 132 chr18 36841556 36841614 -49147320 - L1M4 LINE L1 -2313 3833 3769 * 2412 73 17 0 chr18 36841614 36841914 -49147020 - AluSp SINE Alu -8 305 1 261 245 0 132 chr18 36841914 36842014 -49146920 - L1M4 LINE L1 -2377 3769 3696 410 262 59 59 chr18 36842919 36843140 -49145794 - L2 LINE L2 -1 3312 3092 402 308 46 47 chr18 36843340 36843695 -49145239 + L2 LINE L2 2687 3037 -235 601 278 178 28 chr18 36844625 36844985 -49143949 - MLT1H LTR MaLR 0 549 136 3217 166 18 0 chr18 36845096 36845655 -49143279 + L1MB1 LINE L1 5598 6166 -2 289 327 96 41 chr18 36847499 36847719 -49141215 - MIR SINE MIR -11 251 20 210 348 52 37 chr18 36849538 36849673 -49139261 - L2 LINE L2 0 3272 3136 180 237 88 105 chr18 36851460 36851574 -49137360 - MIR SINE MIR -73 189 78 282 310 16 16 chr18 36852257 36852386 -49136548 - L3 LINE CR1 -769 808 680 1638 164 65 19 chr18 36852469 36852792 -49136142 - MER58B DNA MER1_type -3 338 1 477 317 77 10 chr18 36852844 36853052 -49135882 - L2 LINE L2 -2875 439 218 952 177 98 20 chr18 36853145 36853348 -49135586 + MER20 DNA MER1_type 1 219 0 725 306 24 8 chr18 36854823 36855075 -49133859 - MIR SINE MIR 0 262 7 616 267 114 44 chr18 36855232 36855740 -49133194 - L1ME LINE L1 -354 5812 5270 4380 158 21 1 chr18 36856062 36856759 -49132175 - MER50 LTR ERV1 -23 711 1 576 236 151 24 chr18 36856759 36856971 -49131963 - MIR SINE MIR -8 254 16 434 324 47 29 chr18 36856997 36857272 -49131662 - MARNA DNA Mariner -201 385 106 730 127 0 34 chr18 36860592 36860710 -49128224 - AluSx SINE Alu -3 307 194 1082 130 0 0 chr18 36860711 36860857 -49128077 - AluSx SINE Alu -167 146 1 242 295 53 21 chr18 36861920 36862015 -49126919 + MER5B DNA MER1_type 36 133 -45 1926 55 17 0 chr18 36862562 36862692 -49126242 + AluY SINE Alu 1 138 -173 2285 49 42 11 chr18 36862692 36862978 -49125956 + AluY SINE Alu 1 295 -16 1926 55 17 0 chr18 36862978 36863085 -49125849 + AluY SINE Alu 138 242 -69 258 152 267 29 chr18 36864869 36864974 -49123960 + L2 LINE L2 3172 3301 -12 2247 105 10 0 chr18 36864975 36865269 -49123665 + AluSx SINE Alu 1 297 -15 1646 158 14 3 chr18 36865319 36865604 -49123330 + L1PA13 LINE L1 5873 6160 -3 1540 55 22 0 chr18 36865639 36865820 -49123114 + AluY SINE Alu 1 185 -126 632 77 0 0 chr18 36865820 36865911 -49123023 + AluY SINE Alu 218 308 -3 682 286 109 45 chr18 36866307 36866546 -49122388 - L1ME2 LINE L1 -257 5907 5685 1147 159 13 49 chr18 36866546 36866772 -49122162 - MER20 DNA MER1_type -1 218 1 682 286 109 45 chr18 36866772 36867108 -49121826 - L1ME2 LINE L1 -479 5685 5259 317 284 9 35 chr18 36867890 36868006 -49120928 + L3 LINE CR1 1173 1285 -292 297 267 260 0 chr18 36868022 36868168 -49120766 - MIR SINE MIR -50 212 29 1915 149 3 27 chr18 36868463 36868759 -49120175 + AluSx SINE Alu 3 291 -21 1777 246 121 44 chr18 36868900 36869810 -49119124 + L1ME3A LINE L1 3622 4601 -1545 1706 259 124 26 chr18 36869841 36870279 -49118655 + L1ME3A LINE L1 4815 5209 -961 2344 65 3 20 chr18 36870279 36870572 -49118362 + AluSq SINE Alu 1 288 -25 1706 259 124 26 chr18 36870572 36871334 -49117600 + L1ME3A LINE L1 5209 6170 0 400 250 88 6 chr18 36871763 36871923 -49117011 - MLT1K LTR MaLR -4 584 412 26 0 0 0 chr18 36872501 36872527 -49116407 + AT_rich Low_complexity Low_complexity 1 26 0 192 40 0 0 chr18 36872528 36872553 -49116381 + (TTG)n Simple_repeat Simple_repeat 1 25 0 638 133 85 73 chr18 36874743 36874793 -49114141 - L1MA9 LINE L1 0 6312 6264 1850 120 58 27 chr18 36874793 36875085 -49113849 + AluSq SINE Alu 2 302 -11 638 133 85 73 chr18 36875085 36875199 -49113735 - L1MA9 LINE L1 -48 6264 6146 643 219 101 22 chr18 36877130 36877358 -49111576 - MIR SINE MIR -1 261 16 776 205 120 5 chr18 36877746 36877946 -49110988 - Charlie2a DNA MER1_type -1173 1689 1467 469 300 71 19 chr18 36878101 36878311 -49110623 - Charlie2a DNA MER1_type -2559 303 83 213 121 0 0 chr18 36878359 36878392 -49110542 + (T)n Simple_repeat Simple_repeat 1 33 0 252 0 0 0 chr18 36879066 36879094 -49109840 + (CA)n Simple_repeat Simple_repeat 1 28 0 355 230 96 57 chr18 36879999 36880208 -49108726 - L1ME4a LINE L1 -196 5925 5709 230 258 126 57 chr18 36880252 36880411 -49108523 - L1ME4a LINE L1 -404 5717 5548 2302 104 7 0 chr18 36883309 36883608 -49105326 + AluSg SINE Alu 3 303 -7 1246 192 44 8 chr18 36886014 36886291 -49102643 - L1MB1 LINE L1 -10 6230 5949 317 286 99 6 chr18 36886445 36886606 -49102328 - L1ME4a LINE L1 -1086 5060 4885 342 0 0 0 chr18 36888096 36888134 -49100800 + (GA)n Simple_repeat Simple_repeat 1 38 0 1067 213 169 4 chr18 36888173 36888422 -49100512 + AluSc SINE Alu 1 290 -9 256 235 0 0 chr18 36888635 36888686 -49100248 - L2 LINE L2 -85 3187 3137 503 218 169 0 chr18 36890082 36890130 -49098804 - L1MA10 LINE L1 0 6334 6287 1209 204 54 32 chr18 36890130 36890533 -49098401 - L1ME1 LINE L1 -62 6104 5640 330 250 40 0 chr18 36890534 36890610 -49098324 - MER7C DNA MER2_type -1 601 523 578 255 20 51 chr18 36890610 36890806 -49098128 + L1M4 LINE L1 3343 3532 -2614 2187 176 101 5 chr18 36890810 36891248 -49097686 - MER7C DNA MER2_type -122 480 1 388 213 62 0 chr18 36891251 36891331 -49097603 - L1MB1 LINE L1 -528 5707 5623 6806 244 96 15 chr18 36891341 36894817 -49094117 - L1MB1 LINE L1 -2504 3711 36 990 267 80 48 chr18 36895567 36896028 -49092906 - MLT1H LTR MaLR 0 549 74 801 159 0 0 chr18 36897697 36897823 -49091111 - FRAM SINE Alu -11 165 40 1457 283 148 34 chr18 36899557 36900481 -49088453 - L1ME3A LINE L1 -215 6453 5636 2032 112 35 0 chr18 36900481 36900767 -49088167 - AluSp SINE Alu -17 296 1 1457 283 148 34 chr18 36900767 36901573 -49087361 - L1ME3A LINE L1 -1032 5636 4528 1894 152 50 0 chr18 36901576 36901894 -49087040 + AluJb SINE Alu 1 333 0 508 193 15 44 chr18 36902136 36902271 -49086663 - L1 LINE L1 -1114 5032 4902 * 2797 222 39 19 chr18 36902252 36903056 -49085878 - L1ME3A LINE L1 -4728 1918 1095 315 122 0 0 chr18 36903157 36903206 -49085728 + (A)n Simple_repeat Simple_repeat 1 49 0 371 307 71 30 chr18 36903240 36904618 -49084316 - L1 LINE L1 -2137 4009 2527 228 158 13 105 chr18 36904619 36904695 -49084239 - MLT1J LTR MaLR -12 499 431 548 206 56 0 chr18 36905551 36905677 -49083257 - L1PA16 LINE L1 -5 6161 6029 234 292 74 66 chr18 36905783 36906026 -49082908 - MIR SINE MIR -4 258 14 258 325 12 0 chr18 36906939 36907019 -49081915 + CT-rich Low_complexity Low_complexity 3 83 0 2013 129 14 0 chr18 36907204 36907508 -49081426 - AluSx SINE Alu 0 308 1 1306 252 53 84 chr18 36908561 36909408 -49079526 + L1ME LINE L1 259 1094 -4984 1847 160 10 16 chr18 36909427 36909734 -49079200 - AluJb SINE Alu -7 305 1 4385 81 11 57 chr18 36910653 36911284 -49077650 + L1PA10 LINE L1 5564 6165 -3 428 324 34 20 chr18 36912229 36912377 -49076557 + L2 LINE L2 3123 3272 0 334 161 0 18 chr18 36912630 36912686 -49076248 + 7SLRNA srpRNA srpRNA 182 236 -84 229 286 29 0 chr18 36914523 36914593 -49074341 + L3 LINE CR1 1317 1388 -189 557 282 38 0 chr18 36914747 36914878 -49074056 + L2 LINE L2 3136 3271 -1 937 192 17 0 chr18 36915373 36915550 -49073384 - L1MB2 LINE L1 -3 6168 5989 288 53 0 0 chr18 36919602 36919640 -49069294 + (TG)n Simple_repeat Simple_repeat 2 39 0 2085 106 13 29 chr18 36919690 36920001 -49068933 + AluSx SINE Alu 1 306 -6 731 165 0 0 chr18 36923118 36923233 -49065701 + FRAM SINE Alu 46 160 -16 2121 236 29 40 chr18 36923286 36923811 -49065123 - LTR40a LTR ERVL 0 519 1 207 331 104 68 chr18 36924757 36925392 -49063542 + L2 LINE L2 2149 2806 -508 1049 210 4 48 chr18 36926749 36926978 -49061956 + MER20 DNA MER1_type 1 219 0 207 162 0 0 chr18 36927434 36927471 -49061463 + (TG)n Simple_repeat Simple_repeat 2 38 0 263 288 0 14 chr18 36927528 36927601 -49061333 + MIR SINE MIR 1 72 -190 519 314 137 14 chr18 36927655 36928021 -49060913 - LTR33 LTR ERVL -62 459 49 408 277 69 25 chr18 36928054 36928213 -49060721 + MIR SINE MIR 81 246 -16 396 0 0 0 chr18 36930578 36930622 -49058312 + (TG)n Simple_repeat Simple_repeat 1 44 0 28 0 0 0 chr18 36932696 36932724 -49056210 + AT_rich Low_complexity Low_complexity 1 28 0 181 195 0 73 chr18 36932724 36932765 -49056169 + L2 LINE L2 2698 2735 -579 1742 225 115 59 chr18 36933046 36933637 -49055297 - MLT1E3 LTR MaLR 0 624 1 341 240 97 45 chr18 36936071 36936225 -49052709 + L2 LINE L2 3133 3294 -19 353 278 43 50 chr18 36936241 36936518 -49052416 + L1MDa LINE L1 34 400 -6140 5415 209 88 43 chr18 36936779 36938148 -49050786 + L1MDa LINE L1 992 2413 -4127 1199 163 72 4 chr18 36938148 36938412 -49050522 + L1MA4 LINE L1 6008 6289 -11 5415 209 88 43 chr18 36938412 36938848 -49050086 + L1MDa LINE L1 2413 2828 -3712 2032 134 3 3 chr18 36938887 36939179 -49049755 + AluSx SINE Alu 3 294 -18 2655 114 11 16 chr18 36939752 36940129 -49048805 + THE1C LTR MaLR 1 375 0 2100 267 223 41 chr18 36940196 36941539 -49047395 - L2 LINE L2 -54 3259 1509 417 39 0 0 chr18 36941539 36941590 -49047344 + (TG)n Simple_repeat Simple_repeat 2 52 0 2100 267 223 41 chr18 36941590 36942049 -49046885 - L2 LINE L2 -1804 1509 1135 723 281 102 31 chr18 36943658 36944039 -49044895 - L1ME LINE L1 -398 5723 5316 2591 165 13 2 chr18 36944210 36944664 -49044270 - L1MB2 LINE L1 0 6171 5713 526 242 18 36 chr18 36945002 36945167 -49043767 + MLT1K LTR MaLR 124 285 -303 477 231 8 26 chr18 36945754 36945871 -49043063 + LTR16C LTR ERVL 373 487 -4 8947 35 14 71 chr18 36946003 36947218 -49041716 + SVA Other Other 256 1402 0 284 0 28 0 chr18 36948435 36948471 -49040463 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 1119 105 0 26 chr18 36948809 36948962 -49039972 - AluSg1 SINE Alu -160 149 1 284 296 38 48 chr18 36949603 36949789 -49039145 + L1M4 LINE L1 548 731 -5811 1068 196 29 73 chr18 36950147 36950489 -49038445 - L1ME1 LINE L1 -65 6101 5775 240 269 30 47 chr18 36950499 36950669 -49038265 - L1M4b LINE L1 -6396 459 44 246 256 70 108 chr18 36952180 36952309 -49036625 + MLT1K LTR MaLR 57 180 -408 227 265 108 66 chr18 36952346 36952512 -49036422 + MLT1K LTR MaLR 303 475 -113 1763 170 16 19 chr18 36952520 36952843 -49036091 - L1MC3 LINE L1 -170 7615 7294 1000 188 6 0 chr18 36952860 36953041 -49035893 - MER90 LTR ERV1 0 614 433 195 243 100 14 chr18 36953278 36953348 -49035586 - MIR SINE MIR -69 193 118 293 316 76 19 chr18 36953356 36953514 -49035420 - MLT1H LTR MaLR 0 549 383 319 293 9 0 chr18 36954423 36954529 -49034405 + L1M4 LINE L1 2045 2151 -4674 433 288 128 43 chr18 36954629 36954980 -49033954 - L1MC4a LINE L1 -1883 5925 5545 680 277 178 13 chr18 36955073 36955456 -49033478 - L2 LINE L2 0 3313 2868 1527 114 59 0 chr18 36956033 36956270 -49032664 - HERVL LTR ERVL -274 5380 5130 365 146 0 0 chr18 36956270 36956325 -49032609 - 5S rRNA rRNA -65 56 2 4520 101 25 0 chr18 36956326 36956930 -49032004 - HERVL LTR ERVL -517 5137 4519 898 153 0 84 chr18 36956930 36957120 -49031814 - MLT2A2 LTR ERVL -279 174 1 246 147 0 0 chr18 36957651 36957685 -49031249 - Alu SINE Alu -99 34 1 5456 76 60 45 chr18 36958204 36959044 -49029890 + L1PB1 LINE L1 5299 6150 -1 881 186 115 20 chr18 36960523 36960776 -49028158 - LTR16A LTR ERVL 0 450 174 330 237 137 76 chr18 36963658 36963907 -49025027 + L1MC4a LINE L1 5854 6117 -1691 23 0 0 0 chr18 36963970 36963993 -49024941 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr18 36964220 36964242 -49024692 + AT_rich Low_complexity Low_complexity 1 22 0 861 264 81 3 chr18 36964337 36964632 -49024302 - MER90 LTR ERV1 -257 318 1 249 307 0 0 chr18 36964703 36964778 -49024156 - MLT1F1 LTR MaLR -448 119 45 287 267 82 37 chr18 36965529 36965664 -49023270 + MIR SINE MIR 15 155 -107 1596 125 0 17 chr18 36966852 36967092 -49021842 + AluSx SINE Alu 62 297 -15 453 236 126 16 chr18 36967272 36967454 -49021480 - L1ME4a LINE L1 -238 5883 5682 2168 97 0 21 chr18 36967464 36967780 -49021154 + AluSx SINE Alu 1 310 0 234 319 53 0 chr18 36969872 36969966 -49018968 + MER70B LTR ERVL 463 561 -17 939 214 30 17 chr18 36970182 36970416 -49018518 - L1ME4a LINE L1 -1158 4988 4752 1385 148 65 4 chr18 36970420 36970697 -49018237 - L1PA13 LINE L1 0 6163 5870 195 290 183 21 chr18 36971023 36971116 -49017818 - MIR SINE MIR -62 146 39 1399 136 87 4 chr18 36971646 36971911 -49017023 + AluSx SINE Alu 1 287 -25 318 278 11 0 chr18 36972074 36972164 -49016770 + MIR SINE MIR 34 124 -84 209 219 31 47 chr18 36972462 36972526 -49016408 + MIR SINE MIR 161 223 -39 183 232 0 0 chr18 36972634 36972690 -49016244 + (CA)n Simple_repeat Simple_repeat 2 57 0 1412 158 36 0 chr18 36972732 36972954 -49015980 - MER46A DNA MER2_type -6 230 1 284 94 19 0 chr18 36972976 36973029 -49015905 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 2165 163 171 158 chr18 36973639 36974046 -49014888 + L1MC3 LINE L1 6666 7066 -719 254 310 0 26 chr18 36974046 36974162 -49014772 + MLT1F1 LTR MaLR 13 125 -442 2165 163 171 158 chr18 36974162 36974553 -49014381 + L1MC3 LINE L1 7066 7591 -194 2354 84 10 0 chr18 36974553 36974849 -49014085 + AluSg SINE Alu 1 299 -11 904 202 90 16 chr18 36974863 36975193 -49013741 + MSTD LTR MaLR 1 365 0 670 171 0 0 chr18 36975314 36975431 -49013503 - L1 LINE L1 -1235 4911 4795 324 321 102 33 chr18 36975439 36975800 -49013134 - L1M4 LINE L1 -3192 2954 2569 22 0 0 0 chr18 36975813 36975835 -49013099 + AT_rich Low_complexity Low_complexity 1 22 0 249 281 74 60 chr18 36975841 36976124 -49012810 - L1M4 LINE L1 -3644 2502 2211 2058 91 42 14 chr18 36976124 36976411 -49012523 - AluY SINE Alu -16 295 1 249 281 74 60 chr18 36976411 36976494 -49012440 - L1M4 LINE L1 -3935 2211 2131 1129 195 49 137 chr18 36977076 36977486 -49011448 + MLT1A2 LTR MaLR 1 374 0 193 207 69 0 chr18 36978311 36978369 -49010565 + MIR SINE MIR 82 143 -65 1010 145 0 47 chr18 36978926 36979098 -49009836 + Tigger1 DNA MER2_type 2254 2417 -1 314 211 21 42 chr18 36979106 36979201 -49009733 - L1MC5 LINE L1 -32 7929 7837 4316 151 73 12 chr18 36979251 36980074 -49008860 - L1MB2 LINE L1 -16 6155 5283 214 280 84 9 chr18 36980263 36980370 -49008564 - L2 LINE L2 -2 3270 3156 403 136 11 45 chr18 36980405 36980493 -49008441 - L1MB8 LINE L1 -1 6177 6093 282 97 0 48 chr18 36980505 36980567 -49008367 - L1MB4 LINE L1 -4 6179 6120 481 277 78 49 chr18 36980733 36981087 -49007847 + L1MDa LINE L1 1098 1574 -4852 1779 211 79 41 chr18 36981139 36981830 -49007104 - L1ME LINE L1 -394 5772 5066 1177 269 51 0 chr18 36981834 36982187 -49006747 - L1ME LINE L1 -1275 4871 4501 1384 87 82 0 chr18 36982293 36982477 -49006457 - THE1B LTR MaLR -165 199 1 1875 149 0 13 chr18 36982626 36982928 -49006006 - AluSx SINE Alu -14 298 1 207 205 0 0 chr18 36982949 36982988 -49005946 - L2 LINE L2 -17 3255 3217 297 283 65 22 chr18 36983869 36984007 -49004927 + L2 LINE L2 3167 3310 -3 1937 148 21 3 chr18 36984375 36984665 -49004269 + AluSx SINE Alu 1 295 -17 1450 127 82 4 chr18 36984860 36985105 -49003829 - MSTA LTR MaLR -163 265 2 1525 159 54 58 chr18 36985117 36985412 -49003522 - AluJb SINE Alu -8 304 11 282 128 117 43 chr18 36985478 36985572 -49003362 + L1M4 LINE L1 4378 4478 -1668 542 294 5 16 chr18 36985597 36985784 -49003150 + L1ME LINE L1 5606 5790 -331 1093 201 120 31 chr18 36985980 36986585 -49002349 - MER39 LTR ERV1 0 639 6 633 247 99 16 chr18 36987046 36987228 -49001706 - MLT1B LTR MaLR 0 390 194 21 57 0 0 chr18 36987399 36987434 -49001500 + AT_rich Low_complexity Low_complexity 1 35 0 466 191 221 0 chr18 36988481 36988617 -49000317 - MER5B DNA MER1_type -8 170 5 574 219 159 7 chr18 36988666 36988817 -49000117 + MER5A DNA MER1_type 7 180 -9 247 235 0 0 chr18 36988912 36988963 -48999971 + MER34 LTR ERV1 25 75 -467 1860 132 0 17 chr18 36989067 36989356 -48999578 - MER4B LTR ERV1 0 610 327 2093 252 62 47 chr18 36989458 36989792 -48999142 - L1M4c LINE L1 -3753 2629 2301 354 23 0 0 chr18 36989792 36989835 -48999099 + (TG)n Simple_repeat Simple_repeat 2 44 0 2093 252 62 47 chr18 36989835 36990039 -48998895 - L1M4c LINE L1 -4081 2301 2102 1543 175 88 0 chr18 36990039 36990206 -48998728 - AluJb SINE Alu -2 310 159 248 0 31 0 chr18 36990206 36990238 -48998696 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 1543 175 88 0 chr18 36990238 36990355 -48998579 - AluJb SINE Alu -153 159 1 2093 252 62 47 chr18 36990355 36991378 -48997556 - L1M4c LINE L1 -4280 2102 909 270 0 0 0 chr18 36992619 36992649 -48996285 + (TAA)n Simple_repeat Simple_repeat 2 31 0 1862 143 25 0 chr18 36995642 36995928 -48993006 - AluJb SINE Alu -19 293 1 4566 137 39 4 chr18 36996002 36996776 -48992158 + Tigger1 DNA MER2_type 2 802 -1616 1193 154 19 0 chr18 36996881 36997095 -48991839 + L1P LINE L1 3473 3690 -2456 * 9738 102 9 0 chr18 36997085 36998558 -48990376 + L1P LINE L1 3507 4992 -1154 334 174 11 65 chr18 36999847 36999939 -48988995 - MER5C DNA MER1_type 0 324 238 21 0 0 0 chr18 37000389 37000410 -48988524 + AT_rich Low_complexity Low_complexity 1 21 0 506 122 0 0 chr18 37000587 37000661 -48988273 + AluS SINE Alu 1 74 -239 775 266 68 5 chr18 37000764 37001162 -48987772 + L1M4 LINE L1 2981 3403 -2743 586 223 106 5 chr18 37001292 37001480 -48987454 - MER3 DNA MER1_type 0 209 3 369 295 209 47 chr18 37001820 37002548 -48986386 - L2 LINE L2 -594 2720 1875 2266 270 77 28 chr18 37003262 37003917 -48985017 + L1MEc LINE L1 2058 2680 -3535 4128 53 0 0 chr18 37003917 37004429 -48984505 + L1PA6 LINE L1 5641 6152 -2 2266 270 77 28 chr18 37004429 37005463 -48983471 + L1MEc LINE L1 2680 3796 -2419 21 0 0 0 chr18 37005978 37005999 -48982935 + AT_rich Low_complexity Low_complexity 1 21 0 3430 186 14 45 chr18 37007018 37007818 -48981116 + LTR39 LTR ERV1 9 783 0 1270 164 86 0 chr18 37008314 37008570 -48980364 - L1MB4 LINE L1 -11 6169 5892 380 281 91 45 chr18 37008700 37008860 -48980074 - MIR SINE MIR -61 201 36 3684 218 31 10 chr18 37008945 37009763 -48979171 + MER21B LTR ERV1 12 846 -17 265 214 45 168 chr18 37010193 37010344 -48978590 - MIR SINE MIR 0 262 145 1702 156 20 30 chr18 37010344 37010646 -48978288 + AluJb SINE Alu 1 299 -13 265 214 45 168 chr18 37010646 37010714 -48978220 - MIR SINE MIR -117 145 70 356 336 38 0 chr18 37011053 37011184 -48977750 + L1MEc LINE L1 3876 4011 -2204 441 335 47 14 chr18 37011286 37011582 -48977352 + L1MEc LINE L1 4033 4338 -1877 1139 190 85 10 chr18 37011615 37011733 -48977201 + L1MC/D LINE L1 5282 5390 -1125 2171 162 26 12 chr18 37011733 37011912 -48977022 + MSTB LTR MaLR 1 176 -250 2088 97 0 4 chr18 37011912 37012231 -48976703 + AluSx SINE Alu 5 322 0 2171 162 26 12 chr18 37012231 37012470 -48976464 + MSTB LTR MaLR 176 426 0 1139 190 85 10 chr18 37012470 37012827 -48976107 + L1MC/D LINE L1 5390 5787 -728 442 288 40 0 chr18 37013211 37013336 -48975598 - L2 LINE L2 -190 3082 2953 320 154 264 0 chr18 37014028 37014119 -48974815 - L2 LINE L2 0 3313 3199 198 71 0 0 chr18 37014124 37014152 -48974782 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 381 311 8 8 chr18 37014167 37014289 -48974645 + L2 LINE L2 2172 2293 -1021 383 274 103 12 chr18 37014394 37014590 -48974344 + MIR SINE MIR 1 219 -43 271 264 176 70 chr18 37015047 37015148 -48973786 + HAL1 LINE L1 69 158 -2349 3431 81 0 2 chr18 37015148 37015635 -48973299 + L1PA7 LINE L1 5685 6170 0 271 264 176 70 chr18 37015635 37015805 -48973129 + HAL1 LINE L1 158 370 -2137 301 165 31 103 chr18 37016062 37016159 -48972775 - MER5B DNA MER1_type -1 177 88 572 228 88 23 chr18 37016673 37016844 -48972090 - MIR SINE MIR -15 247 66 245 179 0 0 chr18 37016948 37016987 -48971947 - MIR SINE MIR -207 55 17 685 256 21 71 chr18 37017845 37018126 -48970808 - L1ME1 LINE L1 -6 6160 5894 32 0 0 0 chr18 37018134 37018166 -48970768 + AT_rich Low_complexity Low_complexity 1 32 0 7590 31 2 0 chr18 37018166 37019386 -48969548 - L1PA2 LINE L1 0 6155 4935 2326 90 0 7 chr18 37019494 37019795 -48969139 + AluSx SINE Alu 1 299 -13 422 213 41 97 chr18 37019799 37020119 -48968815 + L1M4 LINE L1 3045 3346 -2800 853 241 66 88 chr18 37020161 37020659 -48968275 + L1ME LINE L1 41 527 -5543 997 218 0 28 chr18 37020687 37020903 -48968031 + AluJo SINE Alu 1 210 -102 191 36 36 0 chr18 37020931 37020959 -48967975 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 200 225 50 75 chr18 37022609 37022689 -48966245 + MIR3 SINE MIR 90 167 -41 22 0 0 0 chr18 37023219 37023241 -48965693 + AT_rich Low_complexity Low_complexity 1 22 0 2100 119 20 3 chr18 37023241 37023543 -48965391 + AluSx SINE Alu 1 307 -5 28 0 0 0 chr18 37024042 37024070 -48964864 + AT_rich Low_complexity Low_complexity 1 28 0 457 160 30 0 chr18 37024389 37024489 -48964445 - L1ME LINE L1 -690 5476 5374 * 4105 245 50 39 chr18 37024488 37025033 -48963901 - L1ME LINE L1 -1007 5139 4602 1431 186 31 28 chr18 37025033 37025324 -48963610 - AluJo SINE Alu -20 292 1 4105 245 50 39 chr18 37025324 37025414 -48963520 - L1ME LINE L1 -1544 4602 4515 2175 127 0 13 chr18 37025414 37025721 -48963213 - AluSc SINE Alu -6 303 1 4105 245 50 39 chr18 37025721 37026767 -48962167 - L1ME LINE L1 -1631 4515 3438 10167 46 3 2 chr18 37026974 37028334 -48960600 - L1P LINE L1 -2376 3770 2410 6150 52 1 0 chr18 37028336 37029094 -48959840 + L1PA5 LINE L1 5385 6143 -11 199 70 23 23 chr18 37029107 37029150 -48959784 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1070 162 5 59 chr18 37029150 37029182 -48959752 + L1PA15 LINE L1 5943 5975 -190 1384 203 17 30 chr18 37029182 37029483 -48959451 + AluJo SINE Alu 1 297 -15 1070 162 5 59 chr18 37029483 37029672 -48959262 + L1PA15 LINE L1 5975 6152 -13 204 40 0 0 chr18 37029676 37029701 -48959233 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1171 195 0 13 chr18 37030051 37030277 -48958657 + AluJo SINE Alu 87 309 -3 947 188 6 6 chr18 37030289 37030454 -48958480 + FRAM SINE Alu 2 166 0 430 168 24 24 chr18 37030798 37030923 -48958011 + CT-rich Low_complexity Low_complexity 3 127 0 1718 197 0 34 chr18 37030935 37031255 -48957679 - AluJb SINE Alu -3 309 1 743 182 6 6 chr18 37031374 37031533 -48957401 - L1MC3 LINE L1 -8 7777 7619 2399 155 36 2 chr18 37031548 37031960 -48956974 + MSTB LTR MaLR 1 426 0 981 206 50 21 chr18 37031990 37032299 -48956635 + L1MD3 LINE L1 7031 7563 -432 333 0 0 0 chr18 37032299 37032336 -48956598 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 221 227 0 0 chr18 37032336 37032380 -48956554 + GA-rich Low_complexity Low_complexity 1 44 0 1477 171 0 8 chr18 37032881 37033132 -48955802 + AluJo SINE Alu 1 249 -63 2195 127 19 32 chr18 37033351 37033720 -48955214 - THE1B LTR MaLR 0 364 1 960 212 40 119 chr18 37034125 37034521 -48954413 - MLT1A1 LTR MaLR 0 365 1 463 202 19 10 chr18 37034637 37034741 -48954193 + MER70B LTR ERVL 456 560 -18 1826 158 13 19 chr18 37035173 37035484 -48953450 - AluJo SINE Alu -1 311 3 19098 42 9 1 chr18 37035764 37038283 -48950651 + L1P LINE L1 2860 5398 -748 629 150 9 9 chr18 37038276 37038389 -48950545 - L1PA15 LINE L1 -208 5957 5845 * 2565 235 24 3 chr18 37038398 37039078 -48949856 - L1P LINE L1 -1689 4457 3764 1696 180 3 11 chr18 37039709 37040020 -48948914 - AluJb SINE Alu 0 309 1 390 287 30 0 chr18 37040067 37040168 -48948766 + L2 LINE L2 2941 3044 -269 231 36 0 0 chr18 37040365 37040393 -48948541 + (A)n Simple_repeat Simple_repeat 1 28 0 784 248 73 5 chr18 37040395 37040869 -48948065 + L1ME LINE L1 4942 5450 -714 25 51 0 0 chr18 37041752 37041791 -48947143 + AT_rich Low_complexity Low_complexity 1 39 0 335 289 31 0 chr18 37042016 37042144 -48946790 + L1ME LINE L1 5608 5739 -382 180 0 0 0 chr18 37042150 37042170 -48946764 + (TA)n Simple_repeat Simple_repeat 2 21 0 1996 126 14 0 chr18 37042172 37042449 -48946485 - AluSx SINE Alu -31 281 1 25 90 0 0 chr18 37042450 37042517 -48946417 + AT_rich Low_complexity Low_complexity 1 67 0 2338 74 3 0 chr18 37042849 37043146 -48945788 + AluY SINE Alu 1 298 -13 2267 181 6 0 chr18 37043450 37043926 -48945008 - L1 LINE L1 -1267 4879 4401 5797 105 27 3 chr18 37043935 37044834 -48944100 + L1PB1 LINE L1 5231 6150 -1 4429 138 21 15 chr18 37044867 37045663 -48943271 + L1MA4A LINE L1 5322 6122 -181 521 174 0 0 chr18 37045666 37045758 -48943176 + L1MA4A LINE L1 6188 6279 -24 22 0 0 0 chr18 37046076 37046098 -48942836 + AT_rich Low_complexity Low_complexity 1 22 0 1486 38 38 0 chr18 37046117 37046302 -48942632 - L1PA5 LINE L1 -2 6152 5961 385 270 99 13 chr18 37047357 37047509 -48941425 + L1ME LINE L1 24 188 -5882 660 270 82 22 chr18 37048104 37048403 -48940531 + L1M4c LINE L1 1516 1878 -865 1402 219 175 32 chr18 37048585 37049088 -48939846 + L1M4 LINE L1 4179 4753 -1393 232 271 0 0 chr18 37049091 37049139 -48939795 + MLT1E2 LTR MaLR 1 48 -606 1841 243 114 0 chr18 37049186 37049626 -48939308 + MLT1E2 LTR MaLR 137 626 0 1878 161 0 0 chr18 37049638 37049917 -48939017 + L1PA13 LINE L1 1 279 -6508 1268 94 0 39 chr18 37049916 37050119 -48938815 + L1PA13 LINE L1 2048 2242 -4545 * 6729 204 9 17 chr18 37050147 37051664 -48937270 + L1PA13 LINE L1 2602 4106 -2691 4737 198 26 29 chr18 37051800 37052779 -48936155 - L1PA15-16 LINE L1 -5195 1654 716 2209 122 3 0 chr18 37052790 37053094 -48935840 - AluSx SINE Alu -7 305 1 778 80 36 0 chr18 37054336 37054448 -48934486 + LTR9B LTR ERV1 445 560 -84 1953 100 0 8 chr18 37054457 37054716 -48934218 + AluY SINE Alu 30 286 -25 285 29 0 0 chr18 37054729 37054763 -48934171 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 416 205 51 0 chr18 37055839 37055917 -48933017 + MER68 LTR ERV1 480 561 -1 226 220 40 0 chr18 37056809 37056859 -48932075 - MIR3 SINE MIR -6 202 151 204 195 39 26 chr18 37056904 37056981 -48931953 + (TATAA)n Simple_repeat Simple_repeat 1 78 0 207 250 0 0 chr18 37056994 37057046 -48931888 + (TCCA)n Simple_repeat Simple_repeat 3 54 0 668 201 179 11 chr18 37057367 37057546 -48931388 - MER3 DNA MER1_type 0 209 1 540 156 37 18 chr18 37057725 37057834 -48931100 - MER34C LTR ERV1 0 585 475 2790 13 0 0 chr18 37058115 37058420 -48930514 + AluYa5 SINE Alu 1 305 -6 3392 148 46 11 chr18 37058802 37059430 -48929504 + L1PB4 LINE L1 5507 6156 0 360 64 0 0 chr18 37059745 37059792 -48929142 + (TG)n Simple_repeat Simple_repeat 2 48 0 3257 67 0 7 chr18 37060108 37060540 -48928394 - L1PA5 LINE L1 -1 6153 5725 2937 165 36 85 chr18 37060725 37061445 -48927489 + L1MB7 LINE L1 5500 6184 0 542 248 13 40 chr18 37063471 37063620 -48925314 + L1MC4 LINE L1 6810 6954 -1088 2284 95 10 0 chr18 37063620 37063924 -48925010 + AluSc SINE Alu 1 307 -2 1115 114 44 0 chr18 37063929 37064087 -48924847 + AluSg/x SINE Alu 130 294 -18 616 278 31 31 chr18 37064088 37064247 -48924687 + L1MC4 LINE L1 6945 7103 -939 2139 102 0 7 chr18 37064247 37064540 -48924394 + AluSq SINE Alu 17 307 -6 616 278 31 31 chr18 37064540 37064700 -48924234 + L1MC4 LINE L1 7102 7264 -778 289 313 10 0 chr18 37064865 37064961 -48923973 + L1MC5 LINE L1 7311 7407 -554 2115 59 4 0 chr18 37064962 37065216 -48923718 + AluY SINE Alu 36 290 -21 2337 98 0 0 chr18 37065226 37065523 -48923411 + AluSg SINE Alu 1 297 -13 6008 220 37 24 chr18 37065524 37067136 -48921798 + Zaphod DNA AcHobo 105 1738 -2293 2166 92 11 0 chr18 37067370 37067651 -48921283 - AluSq SINE Alu -29 284 1 267 369 71 0 chr18 37067972 37068170 -48920764 + L1MEd LINE L1 461 672 -5447 1557 112 17 4 chr18 37068268 37068509 -48920425 - MER65A LTR ERV1 0 445 202 420 156 0 0 chr18 37068521 37068611 -48920323 + (TG)n Simple_repeat Simple_repeat 2 91 0 1102 266 23 144 chr18 37068633 37068721 -48920213 + MLT1D-int LTR MaLR 731 828 -543 885 165 0 0 chr18 37068721 37068854 -48920080 - FLAM_C SINE Alu 0 133 1 1102 266 23 144 chr18 37068854 37069494 -48919440 + MLT1D-int LTR MaLR 828 1371 0 1993 179 122 22 chr18 37069494 37069953 -48918981 + MLT1D LTR MaLR 1 505 0 201 176 0 0 chr18 37070167 37070201 -48918733 + (TAA)n Simple_repeat Simple_repeat 1 34 0 359 352 62 26 chr18 37070217 37070410 -48918524 - MIR SINE MIR -19 243 44 275 277 59 10 chr18 37071019 37071120 -48917814 + L1ME3A LINE L1 5941 6046 -124 7269 48 7 2 chr18 37071267 37072956 -48915978 + L1PA5 LINE L1 4453 6152 -2 1431 193 24 20 chr18 37073452 37073747 -48915187 + AluJo SINE Alu 1 296 -16 22 0 0 0 chr18 37073786 37073808 -48915126 + AT_rich Low_complexity Low_complexity 1 22 0 1261 217 48 69 chr18 37074066 37074527 -48914407 + L1M4 LINE L1 3400 3850 -2296 12734 205 30 16 chr18 37074631 37078486 -48910448 + L1PA16 LINE L1 1761 5562 -1307 1887 96 0 0 chr18 37078486 37078726 -48910208 + AluSc SINE Alu 39 278 -31 189 0 0 0 chr18 37078729 37078750 -48910184 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 12734 205 30 16 chr18 37078750 37078821 -48910113 + L1PA16 LINE L1 5563 5632 -1237 2095 116 159 5 chr18 37078821 37079192 -48909742 + MSTA LTR MaLR 1 428 0 12734 205 30 16 chr18 37079192 37080301 -48908633 + L1PA16 LINE L1 5632 6867 -2 237 376 68 0 chr18 37080305 37080438 -48908496 - MIR SINE MIR -101 161 20 1224 226 206 7 chr18 37081689 37082135 -48906799 - L1ME1 LINE L1 -1 6165 5631 962 258 38 14 chr18 37082135 37082426 -48906508 - L2 LINE L2 -700 2614 2317 2240 117 0 0 chr18 37083178 37083486 -48905448 - AluSg SINE Alu -2 308 1 415 274 65 55 chr18 37083758 37083959 -48904975 - MLT1J LTR MaLR -51 460 258 924 224 55 0 chr18 37083964 37084165 -48904769 - MER20 DNA MER1_type 0 219 8 374 259 88 65 chr18 37084251 37084467 -48904467 - MLT1J LTR MaLR -290 221 1 1274 248 28 45 chr18 37084683 37085191 -48903743 - L1ME LINE L1 -4981 1089 591 1869 138 0 43 chr18 37085318 37085623 -48903311 + AluJb SINE Alu 2 293 -19 422 267 138 39 chr18 37085623 37085956 -48902978 - L1MEc LINE L1 -4369 2352 1987 342 268 88 84 chr18 37085961 37086074 -48902860 - L1MEc LINE L1 -4615 1925 1814 2240 110 3 0 chr18 37086074 37086373 -48902561 - AluSp SINE Alu -13 300 1 342 268 88 84 chr18 37086373 37086509 -48902425 - L1MEc LINE L1 -4726 1814 1675 796 298 130 30 chr18 37086513 37087352 -48901582 - L1MEc LINE L1 -5326 1395 473 1093 185 0 0 chr18 37088681 37088870 -48900064 + MER5A DNA MER1_type 1 189 0 231 231 0 31 chr18 37089324 37089389 -48899545 + CT-rich Low_complexity Low_complexity 1 63 0 420 259 116 37 chr18 37090804 37091020 -48897914 + L2 LINE L2 3080 3312 -1 893 104 0 0 chr18 37091035 37091150 -48897784 + AluSq/x SINE Alu 2 116 -197 1565 154 12 102 chr18 37091154 37091252 -48897682 - LTR9 LTR ERV1 -299 313 208 2317 99 0 0 chr18 37091252 37091556 -48897378 + AluY SINE Alu 1 304 -7 1565 154 12 102 chr18 37091556 37091801 -48897133 - LTR9 LTR ERV1 -404 208 1 2519 211 46 81 chr18 37091802 37092838 -48896096 - L1M4 LINE L1 -1698 4448 3449 2357 82 0 7 chr18 37092840 37093143 -48895791 - AluSc SINE Alu -8 301 1 1884 233 62 11 chr18 37093143 37093607 -48895327 - MLT1E2 LTR MaLR -2 624 137 1199 251 106 29 chr18 37093705 37094357 -48894577 - L1M4 LINE L1 -2683 3463 2762 2163 106 34 0 chr18 37094457 37094749 -48894185 - AluSx SINE Alu -10 302 1 194 239 0 22 chr18 37095224 37095270 -48893664 + L2 LINE L2 3263 3307 -6 3190 172 50 19 chr18 37097767 37098349 -48890585 - MER7C DNA MER2_type -1 601 2 2066 109 32 0 chr18 37098628 37098911 -48890023 + AluSc SINE Alu 1 292 -17 682 241 5 64 chr18 37099633 37099820 -48889114 - MER5B DNA MER1_type -2 176 1 1587 243 85 17 chr18 37101015 37101488 -48887446 + MLT1D LTR MaLR 1 505 0 185 284 42 42 chr18 37101495 37101590 -48887344 - L2 LINE L2 -14 3258 3164 2275 93 7 3 chr18 37102272 37102563 -48886371 + AluSq SINE Alu 1 292 -21 2247 143 47 10 chr18 37103056 37103508 -48885426 - MER49 LTR ERV1 0 923 404 2079 75 15 4 chr18 37103508 37103773 -48885161 - AluY SINE Alu -43 268 1 1917 114 34 17 chr18 37103779 37104077 -48884857 - MER49 LTR ERV1 -616 307 5 200 214 0 0 chr18 37105229 37105271 -48883663 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 189 0 0 0 chr18 37105946 37105967 -48882967 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 955 47 109 0 chr18 37105978 37106106 -48882828 - L1MA2 LINE L1 0 6304 6163 668 179 57 7 chr18 37106587 37106727 -48882207 + MER3 DNA MER1_type 5 151 -58 2360 127 36 33 chr18 37106895 37107258 -48881676 + THE1B LTR MaLR 1 364 0 2148 129 134 31 chr18 37108182 37108570 -48880364 + MSTA LTR MaLR 1 428 0 1833 157 23 10 chr18 37109005 37109311 -48879623 + AluJo SINE Alu 1 310 -2 362 216 53 14 chr18 37109580 37109685 -48879249 + L1MC5 LINE L1 7675 7775 -10 265 338 76 16 chr18 37109833 37110013 -48878921 - MER5B DNA MER1_type -7 171 4 2812 179 45 28 chr18 37110323 37110831 -48878103 + MER45B DNA AcHobo 1 517 -523 2042 144 24 56 chr18 37110830 37110984 -48877950 + MER45B DNA AcHobo 629 786 -795 * 2520 70 0 13 chr18 37110984 37111296 -48877638 - AluY SINE Alu -3 308 1 2042 144 24 56 chr18 37111296 37111567 -48877367 + MER45B DNA AcHobo 786 1040 0 432 0 0 0 chr18 37112088 37112136 -48876798 + (CA)n Simple_repeat Simple_repeat 2 49 0 915 182 123 5 chr18 37113516 37113703 -48875231 + MER3 DNA MER1_type 1 209 0 447 305 40 5 chr18 37115095 37115295 -48873639 + L1MC4a LINE L1 5769 5975 -1833 229 234 0 0 chr18 37115468 37115515 -48873419 - MER5B DNA MER1_type -130 48 2 366 304 89 30 chr18 37115542 37115677 -48873257 + MER5A DNA MER1_type 36 178 -11 2304 118 0 0 chr18 37117939 37118243 -48870691 - AluSx SINE Alu -8 304 1 1060 274 106 19 chr18 37118532 37118575 -48870359 - L1MEc LINE L1 -4759 1637 1599 1732 153 3 27 chr18 37118575 37118869 -48870065 - AluJb SINE Alu -9 303 17 1060 274 106 19 chr18 37118869 37119362 -48869572 - L1MEc LINE L1 -4797 1599 1054 440 189 27 45 chr18 37119358 37119469 -48869465 - L1MEc LINE L1 -6252 144 36 * 619 272 43 0 chr18 37119515 37119699 -48869235 - L1ME LINE L1 -5846 224 33 2190 109 0 0 chr18 37119892 37120177 -48868757 - AluSc SINE Alu -24 285 1 30 59 0 0 chr18 37120190 37120241 -48868693 + AT_rich Low_complexity Low_complexity 1 51 0 1658 141 44 60 chr18 37120242 37120561 -48868373 - L1MA7 LINE L1 -6 6285 5972 418 342 181 26 chr18 37120620 37120968 -48867966 - HAL1 LINE L1 -993 1514 1113 477 194 0 119 chr18 37121124 37121258 -48867676 - AluJo/FRAM SINE Alu -1 311 194 * 747 196 0 15 chr18 37121245 37121378 -48867556 - FAM SINE Alu -54 131 1 324 264 14 0 chr18 37122529 37122601 -48866333 - L2 LINE L2 0 3313 3241 1885 167 0 3 chr18 37123822 37124133 -48864801 + AluSg SINE Alu 1 310 0 1168 256 65 47 chr18 37124753 37125202 -48863732 + L1ME1 LINE L1 5675 6131 -35 1689 195 91 32 chr18 37125202 37125576 -48863358 + MSTD LTR MaLR 1 396 0 6461 233 99 24 chr18 37125578 37127191 -48861743 + MSTD-int LTR MaLR 2 1735 0 1535 180 163 31 chr18 37127191 37127541 -48861393 + MSTD LTR MaLR 1 396 0 939 105 23 0 chr18 37128057 37128190 -48860744 + MER85 DNA T2_type 3 138 -1 287 208 14 0 chr18 37128903 37128975 -48859959 - L1MCc LINE L1 -4926 2196 2124 1303 268 86 31 chr18 37129030 37129848 -48859086 - L1MCc LINE L1 -4897 1526 1047 1597 207 36 14 chr18 37129862 37130219 -48858715 + MLT1A1 LTR MaLR 1 365 0 1467 244 33 44 chr18 37130303 37130754 -48858180 - L1MCc LINE L1 -5947 476 31 2280 130 3 48 chr18 37131513 37131866 -48857068 + MER1B DNA MER1_type 1 337 0 180 0 0 0 chr18 37132522 37132542 -48856392 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1409 202 11 14 chr18 37132551 37132828 -48856106 - AluJb SINE Alu -36 276 1 261 247 0 0 chr18 37133472 37133545 -48855389 + (TA)n Simple_repeat Simple_repeat 2 74 0 811 328 51 33 chr18 37133863 37134582 -48854352 - L1PA13 LINE L1 -5276 1511 71 186 48 24 48 chr18 37134595 37134637 -48854297 + (TTTTA)n Simple_repeat Simple_repeat 2 42 0 2500 38 0 0 chr18 37134638 37134927 -48854007 - L1PA3 LINE L1 -24 6131 5843 564 265 13 26 chr18 37135404 37135555 -48853379 + MER58A DNA MER1_type 28 176 -48 218 219 27 27 chr18 37135838 37135911 -48853023 + T-rich Low_complexity Low_complexity 6 78 0 5617 75 17 6 chr18 37136450 37137161 -48851773 - L1PA8A LINE L1 0 6131 5413 518 218 0 18 chr18 37137163 37137273 -48851661 + L1 LINE L1 4643 4750 -1396 388 345 181 26 chr18 37137468 37137816 -48851118 - HAL1 LINE L1 -993 1514 1113 477 141 0 39 chr18 37137991 37138069 -48850865 - 7SLRNA srpRNA srpRNA -10 310 236 747 196 0 15 chr18 37138093 37138226 -48850708 - FAM SINE Alu -54 131 1 324 264 14 0 chr18 37139378 37139450 -48849484 - L2 LINE L2 0 3313 3241 2569 81 0 0 chr18 37140671 37140981 -48847953 + AluSg SINE Alu 1 310 0 222 308 87 10 chr18 37141853 37141957 -48846977 - L3 LINE CR1 -3 1574 1463 2301 69 0 0 chr18 37142476 37142751 -48846183 + AluY SINE Alu 21 295 -16 193 224 121 17 chr18 37143221 37143279 -48845655 + MIR SINE MIR 42 105 -103 223 400 0 0 chr18 37145855 37145925 -48843009 - L2 LINE L2 0 3272 3203 4591 164 52 18 chr18 37146246 37147080 -48841854 + MER21B LTR ERV1 1 862 -1 276 214 102 10 chr18 37147164 37147262 -48841672 + MLT1J LTR MaLR 399 505 -6 181 317 114 19 chr18 37147292 37147563 -48841371 - L2 LINE L2 -1205 2109 1813 854 210 80 5 chr18 37147572 37147772 -48841162 + MER58A DNA MER1_type 10 224 0 323 336 0 38 chr18 37148606 37148737 -48840197 - MIR3 SINE MIR -5 203 78 21 0 0 0 chr18 37149925 37149946 -48838988 + AT_rich Low_complexity Low_complexity 1 21 0 626 168 0 92 chr18 37149954 37150085 -48838849 - FLAM_A SINE Alu -10 123 5 2113 98 0 36 chr18 37150712 37151017 -48837917 - AluY SINE Alu -17 294 1 851 291 103 66 chr18 37151017 37151578 -48837356 - L2 LINE L2 -163 3150 2558 714 169 0 23 chr18 37152763 37152893 -48836041 + FLAM_A SINE Alu 1 127 -6 234 65 0 0 chr18 37153754 37153785 -48835149 + L1M4 LINE L1 5442 5472 -702 816 218 80 5 chr18 37153805 37153993 -48834941 + MER58A DNA MER1_type 7 208 -16 865 243 48 0 chr18 37154239 37154490 -48834444 - L1MEc LINE L1 -4284 2112 1850 4185 174 82 12 chr18 37154497 37155926 -48833008 - L1MB7 LINE L1 -19 6165 4635 775 221 27 53 chr18 37155926 37156189 -48832745 - L1MB7 LINE L1 -1731 4415 4160 4724 242 85 44 chr18 37156190 37156617 -48832317 - L1MEc LINE L1 -4536 1860 1452 2180 104 0 0 chr18 37156617 37156904 -48832030 - AluSg SINE Alu -19 291 5 4724 242 85 44 chr18 37156904 37158238 -48830696 - L1MEc LINE L1 -4944 1452 27 1822 130 38 20 chr18 37158334 37158626 -48830308 - AluSg SINE Alu -13 297 1 840 275 130 41 chr18 37158713 37159106 -48829828 - LTR16B LTR ERVL -3 461 34 275 312 0 11 chr18 37159291 37159384 -48829550 - L1M4 LINE L1 -1221 4925 4834 877 248 42 5 chr18 37159456 37159670 -48829264 - MER58A DNA MER1_type -2 222 1 301 291 89 19 chr18 37159716 37159874 -48829060 - L1ME3A LINE L1 -233 5937 5769 883 240 222 13 chr18 37159906 37160415 -48828519 - LTR50 LTR ERVL -80 715 24 234 226 69 59 chr18 37160440 37160542 -48828392 - L1ME LINE L1 -360 5804 5702 21 0 0 0 chr18 37160542 37160563 -48828371 + AT_rich Low_complexity Low_complexity 1 21 0 38 85 0 0 chr18 37160877 37160971 -48827963 + AT_rich Low_complexity Low_complexity 1 94 0 182 360 34 20 chr18 37161022 37161169 -48827765 + L2 LINE L2 2259 2407 -907 511 286 165 18 chr18 37161408 37161632 -48827302 + MIR SINE MIR 3 259 -3 317 204 159 0 chr18 37163431 37163519 -48825415 + L1M4 LINE L1 5204 5305 -841 503 252 72 0 chr18 37163571 37163710 -48825224 + L1M4 LINE L1 4757 4905 -1241 745 262 44 44 chr18 37164345 37164639 -48824295 - L1ME2 LINE L1 -13 6151 5858 2633 241 68 31 chr18 37164645 37166885 -48822049 - L1MB4 LINE L1 -9 6171 3702 984 171 59 18 chr18 37166899 37167121 -48821813 - L1MB2 LINE L1 -2 6169 5939 1184 227 115 17 chr18 37167150 37167683 -48821251 - L1MB5 LINE L1 -1 6173 5565 511 280 106 32 chr18 37167980 37168198 -48820736 - MIR SINE MIR -10 252 19 225 151 19 19 chr18 37168520 37168573 -48820361 + A-rich Low_complexity Low_complexity 2 54 0 182 154 62 19 chr18 37168723 37168885 -48820049 + (TA)n Simple_repeat Simple_repeat 1 169 0 1235 189 35 0 chr18 37169937 37170164 -48818770 - MER46A DNA MER2_type 0 236 2 453 261 283 0 chr18 37170469 37170607 -48818327 + MER5A DNA MER1_type 13 189 0 351 198 133 46 chr18 37170621 37170757 -48818177 + MIR SINE MIR 45 189 -63 207 317 58 42 chr18 37170931 37171051 -48817883 + L3b LINE CR1 1121 1242 -341 1131 58 0 0 chr18 37171087 37171226 -48817708 + AluY SINE Alu 152 290 -21 5092 148 25 18 chr18 37171285 37172175 -48816759 - MER4D LTR ERV1 0 903 8 2270 102 0 0 chr18 37172304 37172608 -48816326 - AluSc SINE Alu 0 309 6 2217 80 14 0 chr18 37172608 37172895 -48816039 - AluSp SINE Alu -15 298 8 2381 190 69 19 chr18 37173961 37174874 -48814060 - L1MB5 LINE L1 -3 6675 5661 660 209 5 61 chr18 37174908 37175104 -48813830 - L1MB5 LINE L1 -1734 4910 4726 2231 149 62 0 chr18 37175104 37175492 -48813442 - MER44D DNA MER2_type 0 605 139 5502 224 36 8 chr18 37175492 37177008 -48811926 - L1MB5 LINE L1 -1984 4660 3102 3453 105 14 2 chr18 37177010 37177494 -48811440 + LTR3b LTR ERVK 1 490 -10 340 73 0 0 chr18 37177500 37177541 -48811393 + LTR3b LTR ERVK 460 500 0 1244 225 59 80 chr18 37177555 37178333 -48810601 - L1MB5 LINE L1 -3558 3086 2293 2134 113 16 7 chr18 37178333 37178642 -48810292 - AluSx SINE Alu 0 312 1 1244 225 59 80 chr18 37178642 37178655 -48810279 - L1MB5 LINE L1 -4351 2293 2281 2054 165 29 18 chr18 37178655 37179037 -48809897 + MLT1B LTR MaLR 3 388 -2 1244 225 59 80 chr18 37179037 37179320 -48809614 - L1MB5 LINE L1 -4363 2281 1913 3561 206 29 35 chr18 37179333 37180602 -48808332 - L1MB5 LINE L1 0 6174 4916 3606 243 60 31 chr18 37180602 37182447 -48806487 - L1MB5 LINE L1 -4728 1918 12 1573 250 38 24 chr18 37182471 37183048 -48805886 - L1MB5 LINE L1 -3284 2862 2278 * 2193 196 63 18 chr18 37183047 37183537 -48805397 - L1MD3 LINE L1 -8 7987 7476 523 172 0 0 chr18 37183952 37184045 -48804889 - AluJ/FLAM SINE Alu -219 93 1 534 259 136 28 chr18 37184076 37184744 -48804190 - L1M4 LINE L1 -2965 3181 2442 254 196 0 0 chr18 37184992 37185043 -48803891 - L1MD3 LINE L1 -17 7978 7928 * 647 185 96 11 chr18 37185040 37185218 -48803716 + L1MB7 LINE L1 5992 6184 0 * 1233 219 113 28 chr18 37185214 37185960 -48802974 - L1MD3 LINE L1 -53 7942 7049 1497 220 7 7 chr18 37185960 37186264 -48802670 - AluJb SINE Alu -6 306 3 1233 219 113 28 chr18 37186264 37186281 -48802653 - L1MD3 LINE L1 -946 7049 7035 4655 255 141 26 chr18 37186338 37188600 -48800334 - L1MD2 LINE L1 -13 6346 3554 1786 57 0 0 chr18 37188600 37188811 -48800123 - AluY SINE Alu -15 296 86 4655 255 141 26 chr18 37188811 37189802 -48799132 - L1MD2 LINE L1 -2805 3554 2679 206 333 146 0 chr18 37191128 37191251 -48797683 + L3 LINE CR1 1 141 -1436 2130 128 40 93 chr18 37191343 37191795 -48797139 + MSTA LTR MaLR 1 428 0 228 264 14 0 chr18 37191994 37192066 -48796868 + A-rich Low_complexity Low_complexity 4 76 0 236 297 109 25 chr18 37192436 37192638 -48796296 + L3b LINE CR1 1162 1380 -203 21 36 0 0 chr18 37193197 37193225 -48795709 + AT_rich Low_complexity Low_complexity 1 28 0 192 77 0 0 chr18 37193332 37193358 -48795576 + (T)n Simple_repeat Simple_repeat 1 26 0 2171 87 0 10 chr18 37194161 37194460 -48794474 - AluSc SINE Alu -13 296 1 23 54 0 0 chr18 37194738 37194775 -48794159 + AT_rich Low_complexity Low_complexity 1 37 0 856 221 231 10 chr18 37194922 37195225 -48793709 - L1MD3 LINE L1 -83 7912 7543 545 292 12 12 chr18 37195441 37195609 -48793325 + L1MCc LINE L1 1121 1288 -5135 * 745 202 67 6 chr18 37195608 37195786 -48793148 - L1MC4a LINE L1 -401 7407 7219 320 131 49 0 chr18 37195789 37195850 -48793084 - L1MC4a LINE L1 -856 6952 6889 1272 247 157 26 chr18 37196540 37197119 -48791815 + L1MCc LINE L1 811 1465 -4958 280 211 0 0 chr18 37197122 37197179 -48791755 - MLT1F1 LTR MaLR 0 567 511 650 244 94 51 chr18 37197406 37197681 -48791253 - MLT1-int LTR MaLR -769 602 316 538 284 78 22 chr18 37197683 37197915 -48791019 - MLT1F LTR MaLR -297 245 1 30592 110 14 65 chr18 37197989 37201961 -48786973 - L1PA7 LINE L1 -2 6152 2642 2428 69 0 3 chr18 37201961 37202264 -48786670 - AluY SINE Alu -9 302 1 30592 110 14 65 chr18 37202264 37204773 -48784161 - L1PA7 LINE L1 -3512 2642 9 1604 225 64 44 chr18 37204776 37205386 -48783548 - L1M4 LINE L1 -1896 4250 3629 2882 189 45 22 chr18 37205782 37206422 -48782512 - L1MB8 LINE L1 -53 6125 5471 608 214 0 0 chr18 37206423 37206540 -48782394 - Tigger7 DNA MER2_type -613 120 4 1873 202 75 28 chr18 37207504 37207930 -48781004 + Tigger4(Zombi) DNA MER2_type 6 451 -2280 462 200 0 0 chr18 37207919 37208004 -48780930 + Tigger4(Zombi) DNA MER2_type 2646 2730 -1 * 23 33 0 0 chr18 37208239 37208269 -48780665 + AT_rich Low_complexity Low_complexity 1 30 0 208 420 18 0 chr18 37208306 37208418 -48780516 - MIR3 SINE MIR -9 199 86 21 82 0 0 chr18 37209405 37209454 -48779480 + AT_rich Low_complexity Low_complexity 1 49 0 2290 98 3 0 chr18 37210017 37210314 -48778620 - AluSq SINE Alu -15 298 1 273 29 0 0 chr18 37210797 37210831 -48778103 + (TG)n Simple_repeat Simple_repeat 2 35 0 597 226 53 0 chr18 37212521 37212654 -48776280 + MER58B DNA MER1_type 195 334 -7 27 0 0 0 chr18 37213078 37213105 -48775829 + AT_rich Low_complexity Low_complexity 1 27 0 325 283 89 37 chr18 37213827 37214009 -48774925 + MIR SINE MIR 23 214 -48 183 42 0 0 chr18 37214325 37214349 -48774585 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 204 125 0 0 chr18 37214505 37214537 -48774397 + (T)n Simple_repeat Simple_repeat 1 32 0 718 333 114 28 chr18 37214596 37214690 -48774244 + L1M4 LINE L1 4318 4403 -1743 2185 101 0 7 chr18 37214690 37214977 -48773957 + AluSx SINE Alu 7 291 -21 718 333 114 28 chr18 37214977 37215522 -48773412 + L1M4 LINE L1 4403 5012 -1134 3440 108 7 17 chr18 37215607 37216145 -48772789 - L1PB2 LINE L1 -3 6148 5616 612 62 134 18 chr18 37217246 37217358 -48771576 + L1PA16 LINE L1 6033 6157 -9 1311 218 74 3 chr18 37217566 37217737 -48771197 - AluJb SINE Alu -4 308 108 543 43 0 0 chr18 37217737 37217807 -48771127 + (TG)n Simple_repeat Simple_repeat 1 70 0 1311 218 74 3 chr18 37217807 37217919 -48771015 - AluJb SINE Alu -204 108 5 1693 174 7 13 chr18 37218830 37219129 -48769805 - AluJo SINE Alu -15 297 1 1558 179 45 24 chr18 37219989 37220363 -48768571 + MLT1B LTR MaLR 5 386 -4 24 0 0 0 chr18 37222196 37222220 -48766714 + AT_rich Low_complexity Low_complexity 1 24 0 306 323 24 30 chr18 37222861 37223028 -48765906 - MLT1J LTR MaLR -27 484 319 1035 254 73 37 chr18 37223090 37223499 -48765435 - L1M4 LINE L1 -1774 4441 4018 281 330 0 39 chr18 37223591 37223694 -48765240 + L2 LINE L2 3174 3272 0 664 183 71 36 chr18 37226427 37226616 -48762318 - L1 LINE L1 -1017 5129 4935 19901 114 9 14 chr18 37227598 37230630 -48758304 + L1P LINE L1 214 3230 -2916 464 264 193 15 chr18 37231451 37231648 -48757286 - MIR SINE MIR -5 257 26 319 286 126 8 chr18 37232864 37232983 -48755951 - L2 LINE L2 -12 3301 3169 21 36 0 0 chr18 37233231 37233259 -48755675 + AT_rich Low_complexity Low_complexity 1 28 0 186 133 0 0 chr18 37234048 37234078 -48754856 + (A)n Simple_repeat Simple_repeat 1 30 0 432 322 20 13 chr18 37234771 37234923 -48754011 - MIR3 SINE MIR -36 172 20 1568 183 36 15 chr18 37235014 37235403 -48753531 + L1 LINE L1 3121 3517 -2629 434 311 16 27 chr18 37236619 37236802 -48752132 + MIR SINE MIR 79 259 -3 438 234 179 55 chr18 37236894 37237039 -48751895 + MER5A DNA MER1_type 13 175 -14 1476 249 123 22 chr18 37237290 37238118 -48750816 - L1MEc LINE L1 -3524 2691 1783 1907 149 3 3 chr18 37238118 37238448 -48750486 - AluSx SINE Alu 0 330 1 1476 249 123 22 chr18 37238448 37238612 -48750322 - L1MEc LINE L1 -4432 1783 1637 2326 209 68 7 chr18 37238852 37239425 -48749509 - L1MC3 LINE L1 -1217 6568 5961 5846 159 15 21 chr18 37239530 37240668 -48748266 - L1 LINE L1 -1135 5011 3881 21 71 0 0 chr18 37240694 37240736 -48748198 + AT_rich Low_complexity Low_complexity 1 42 0 409 294 176 0 chr18 37241028 37241181 -48747753 - MER5A DNA MER1_type 0 189 10 3144 159 39 15 chr18 37241472 37242539 -48746395 - L1P4 LINE L1 -383 5783 4685 1693 278 36 28 chr18 37242581 37243224 -48745710 - L1MEc LINE L1 -5711 685 38 2297 90 0 3 chr18 37243424 37243723 -48745211 - AluY SINE Alu -13 298 1 860 123 0 0 chr18 37243953 37244075 -48744859 - AluSp/q SINE Alu -19 294 173 222 308 87 10 chr18 37245929 37246033 -48742901 - L3 LINE CR1 -3 1574 1463 2301 69 0 0 chr18 37246552 37246827 -48742107 + AluY SINE Alu 21 295 -16 193 224 121 17 chr18 37247298 37247356 -48741578 + MIR SINE MIR 42 105 -103 213 400 0 0 chr18 37249932 37250002 -48738932 - L2 LINE L2 0 3272 3203 226 229 71 14 chr18 37250034 37250104 -48738830 + MLT1L LTR MaLR 1 74 -541 4962 162 51 26 chr18 37250323 37251164 -48737770 + MER21B LTR ERV1 1 862 -1 280 214 102 10 chr18 37251248 37251346 -48737588 + MLT1J LTR MaLR 399 505 -6 285 314 131 9 chr18 37251376 37251605 -48737329 - L2 LINE L2 -1205 2109 1853 871 210 80 5 chr18 37251656 37251856 -48737078 + MER58A DNA MER1_type 10 224 0 182 221 0 147 chr18 37252233 37252301 -48736633 + MIR3 SINE MIR 97 154 -54 306 336 0 38 chr18 37252690 37252821 -48736113 - MIR3 SINE MIR -5 203 78 21 0 0 0 chr18 37254010 37254031 -48734903 + AT_rich Low_complexity Low_complexity 1 21 0 690 168 0 92 chr18 37254039 37254170 -48734764 - FLAM_A SINE Alu -10 123 5 2254 92 0 17 chr18 37254793 37255086 -48733848 - AluSg SINE Alu -17 293 6 553 278 22 38 chr18 37255505 37255605 -48733329 + MIR SINE MIR 3 99 -141 1643 178 16 25 chr18 37255605 37255920 -48733014 - AluJo SINE Alu 0 312 1 553 278 22 38 chr18 37255920 37255999 -48732935 + MIR SINE MIR 99 178 -62 373 336 95 9 chr18 37256064 37256275 -48732659 + L2 LINE L2 2642 2870 -444 313 152 2 0 chr18 37256548 37256604 -48732330 + Alu SINE Alu 248 296 -4 260 238 24 83 chr18 37256606 37256690 -48732244 + L2 LINE L2 3194 3272 0 1052 121 22 55 chr18 37257906 37258088 -48730846 + MLT1C LTR MaLR 1 176 -291 356 270 50 0 chr18 37258067 37258167 -48730767 + AluJb SINE Alu 100 204 -98 * 231 342 17 86 chr18 37258301 37258418 -48730516 + MIR SINE MIR 17 125 -83 401 267 40 0 chr18 37258760 37258861 -48730073 - MIR SINE MIR -60 202 98 568 267 94 28 chr18 37259183 37259671 -48729263 + MLT1F1 LTR MaLR 1 567 0 748 301 78 39 chr18 37260301 37260660 -48728274 + MER68 LTR ERV1 190 562 0 1797 137 18 28 chr18 37260799 37261084 -48727850 - AluJo SINE Alu -30 282 1 1591 185 73 22 chr18 37261228 37261646 -48727288 - MLT1E2 LTR MaLR -7 619 204 2777 10 0 0 chr18 37261646 37261945 -48726989 - AluY SINE Alu -12 299 1 1591 185 73 22 chr18 37261945 37262069 -48726865 - MLT1E2 LTR MaLR -422 204 88 3718 180 98 40 chr18 37262103 37263337 -48725597 - L1MB7 LINE L1 0 6184 5023 2422 76 0 0 chr18 37263337 37263641 -48725293 + AluY SINE Alu 1 304 -7 3718 180 98 40 chr18 37263641 37263750 -48725184 - L1MB7 LINE L1 -1161 5023 4922 751 121 106 0 chr18 37263750 37263882 -48725052 - L1MB3 LINE L1 0 6183 6038 3718 180 98 40 chr18 37263882 37264220 -48724714 - L1MB7 LINE L1 -1262 4922 4605 1761 147 45 3 chr18 37264220 37264506 -48724428 - AluJo SINE Alu -9 303 6 3718 180 98 40 chr18 37264506 37264591 -48724343 - L1MB7 LINE L1 -1579 4605 4526 342 0 0 0 chr18 37264591 37264629 -48724305 + (TG)n Simple_repeat Simple_repeat 1 38 0 3718 180 98 40 chr18 37264629 37264793 -48724141 - L1MB7 LINE L1 -1658 4526 4082 340 146 0 0 chr18 37264794 37264849 -48724085 + MER68 LTR ERV1 3 57 -505 547 222 19 0 chr18 37264865 37264973 -48723961 + MER68 LTR ERV1 453 562 0 896 194 45 53 chr18 37264975 37265222 -48723712 - L1MB7 LINE L1 -2063 4083 3839 716 192 32 0 chr18 37265228 37265353 -48723581 - FLAM_A SINE Alu -4 129 1 869 244 101 37 chr18 37265412 37265844 -48723090 - L2 LINE L2 -117 3196 2732 302 345 61 20 chr18 37265831 37265979 -48722955 + L2 LINE L2 2941 3094 -178 * 1921 62 156 4 chr18 37266111 37266368 -48722566 + AluSq SINE Alu 1 296 -7 24 53 0 0 chr18 37267200 37267238 -48721696 + GC_rich Low_complexity Low_complexity 1 38 0 416 137 0 0 chr18 37270151 37270224 -48718710 - MER2 DNA MER2_type -134 211 139 2091 113 7 13 chr18 37270491 37270793 -48718141 + AluSg SINE Alu 1 300 -10 348 247 11 32 chr18 37270896 37270989 -48717945 - L2 LINE L2 -41 3272 3182 452 204 127 42 chr18 37271100 37271242 -48717692 - MIR SINE MIR -72 190 37 10459 216 35 32 chr18 37272194 37276841 -48712093 + L1M2 LINE L1 201 4859 -1989 240 35 0 0 chr18 37326899 37326928 -48662006 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 2149 97 0 4 chr18 37326928 37327207 -48661727 - AluSx SINE Alu -34 278 1 982 256 211 7 chr18 37328629 37329074 -48659860 - L1ME1 LINE L1 0 6166 5631 980 254 38 14 chr18 37329074 37329365 -48659569 - L2 LINE L2 -700 2614 2317 2124 125 0 0 chr18 37330119 37330414 -48658520 - AluSg SINE Alu -15 295 1 415 274 65 55 chr18 37330686 37330887 -48658047 - MLT1J LTR MaLR -51 460 258 886 229 55 0 chr18 37330892 37331093 -48657841 - MER20 DNA MER1_type 0 219 8 401 255 88 65 chr18 37331179 37331395 -48657539 - MLT1J LTR MaLR -290 221 1 1551 276 51 51 chr18 37331611 37332419 -48656515 - L1ME LINE L1 -4981 1089 282 385 270 99 13 chr18 37332655 37332807 -48656127 - L1ME LINE L1 -5882 188 24 1459 49 38 0 chr18 37333864 37334049 -48654885 + L1PA5 LINE L1 5961 6152 -2 22 0 0 0 chr18 37334068 37334090 -48654844 + AT_rich Low_complexity Low_complexity 1 22 0 521 174 0 0 chr18 37334408 37334500 -48654434 - L1MA4A LINE L1 -24 6279 6188 4455 140 21 14 chr18 37334503 37335298 -48653636 - L1MA4A LINE L1 -181 6122 5322 5775 106 0 0 chr18 37335331 37336230 -48652704 - L1PB1 LINE L1 -1 6150 5231 3534 201 16 5 chr18 37336239 37337061 -48651873 + L1PB1 LINE L1 4401 5231 -915 2295 226 36 22 chr18 37337054 37337691 -48651243 - L1MA4A LINE L1 -814 5332 4687 * 2358 242 49 60 chr18 37337791 37337966 -48650968 - L1M4c LINE L1 -4069 2756 2581 282 29 0 0 chr18 37337966 37338001 -48650933 + (TG)n Simple_repeat Simple_repeat 2 36 0 2358 242 49 60 chr18 37338001 37338205 -48650729 - L1M4c LINE L1 -4244 2581 2376 1521 175 88 0 chr18 37338205 37338372 -48650562 - AluJb SINE Alu -2 310 159 248 0 31 0 chr18 37338372 37338404 -48650530 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 1521 175 88 0 chr18 37338404 37338521 -48650413 - AluJb SINE Alu -153 159 1 2358 242 49 60 chr18 37338521 37339824 -48649110 - L1M4c LINE L1 -4449 2376 894 286 296 38 48 chr18 37340012 37340198 -48648736 - L1M4c LINE L1 -5811 731 548 2146 103 3 17 chr18 37340839 37341139 -48647795 + AluSg1 SINE Alu 1 296 -13 335 174 11 65 chr18 37342432 37342524 -48646410 - MER5C DNA MER1_type 0 324 238 21 0 0 0 chr18 37342974 37342995 -48645939 + AT_rich Low_complexity Low_complexity 1 21 0 1688 109 101 4 chr18 37343172 37343420 -48645514 + AluSx SINE Alu 1 272 -40 238 375 87 60 chr18 37343765 37344178 -48644756 + L2 LINE L2 2813 3236 -36 319 286 126 8 chr18 37345364 37345483 -48643451 - L2 LINE L2 -12 3301 3169 21 36 0 0 chr18 37345731 37345759 -48643175 + AT_rich Low_complexity Low_complexity 1 28 0 186 133 0 0 chr18 37346548 37346578 -48642356 + (A)n Simple_repeat Simple_repeat 1 30 0 432 322 20 13 chr18 37347271 37347423 -48641511 - MIR3 SINE MIR -36 172 20 8790 211 18 10 chr18 37347514 37348085 -48640849 + L1 LINE L1 3121 3686 -2460 2092 116 7 3 chr18 37348085 37348379 -48640555 + AluSx SINE Alu 1 295 -17 8790 211 18 10 chr18 37348379 37349885 -48639049 + L1 LINE L1 3686 5215 -931 1100 129 3 18 chr18 37349886 37350205 -48638729 - THE1C LTR MaLR -1 374 1 4894 169 10 9 chr18 37350219 37351135 -48637799 + L1PA16 LINE L1 5227 6142 -24 241 280 27 0 chr18 37352518 37352593 -48636341 + (TATATG)n Simple_repeat Simple_repeat 3 79 0 2034 135 28 0 chr18 37352978 37353267 -48635667 - AluSx SINE Alu -15 297 1 1179 202 17 97 chr18 37353584 37353752 -48635182 + MER58B DNA MER1_type 6 131 -2289 2426 68 0 26 chr18 37353752 37354059 -48634875 - AluY SINE Alu -12 299 1 1179 202 17 97 chr18 37354059 37354251 -48634683 + MER58B DNA MER1_type 131 337 -4 2001 162 60 0 chr18 37354252 37354604 -48634330 - MER83C LTR ERV1 0 373 1 550 239 31 0 chr18 37354622 37354752 -48634182 + L1ME3A LINE L1 5812 5945 -225 2030 127 7 3 chr18 37354755 37355046 -48633888 + AluSx SINE Alu 1 292 -20 201 74 0 0 chr18 37355054 37355081 -48633853 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 292 288 58 42 chr18 37355140 37355331 -48633603 + L1ME3A LINE L1 5962 6155 -15 385 244 206 0 chr18 37355426 37355557 -48633377 + MIR SINE MIR 84 241 -21 6778 46 41 0 chr18 37355577 37356499 -48632435 + L1PA7 LINE L1 5202 6158 0 1184 227 3 17 chr18 37356666 37356957 -48631977 + L1ME1 LINE L1 5340 5626 -536 255 41 82 20 chr18 37356989 37357038 -48631896 + MADE1 DNA Mariner 28 79 -1 887 271 38 14 chr18 37357518 37357809 -48631125 + L2 LINE L2 2317 2614 -700 1237 224 206 7 chr18 37357809 37358255 -48630679 + L1ME1 LINE L1 5631 6165 -1 237 376 68 0 chr18 37359505 37359638 -48629296 + MIR SINE MIR 20 161 -101 12764 206 29 20 chr18 37359642 37360751 -48628183 - L1PA16 LINE L1 -2 6867 5770 2095 116 159 5 chr18 37360751 37361122 -48627812 - MSTA LTR MaLR 0 428 1 12764 206 29 20 chr18 37361122 37361192 -48627742 - L1PA16 LINE L1 -1099 5770 5702 189 0 0 0 chr18 37361192 37361213 -48627721 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1887 96 0 0 chr18 37361216 37361456 -48627478 - AluSc SINE Alu -31 278 39 12764 206 29 20 chr18 37361456 37366401 -48622533 - L1PA16 LINE L1 -1168 5701 716 2209 122 3 0 chr18 37366412 37366716 -48622218 - AluSx SINE Alu -7 305 1 21 36 0 0 chr18 37367230 37367258 -48621676 + AT_rich Low_complexity Low_complexity 1 28 0 778 80 36 0 chr18 37367958 37368070 -48620864 + LTR9B LTR ERV1 445 560 -84 1928 104 0 8 chr18 37368079 37368338 -48620596 + AluY SINE Alu 30 286 -25 285 29 0 0 chr18 37368351 37368385 -48620549 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 938 188 6 6 chr18 37369322 37369487 -48619447 - FRAM SINE Alu 0 166 2 1155 199 0 13 chr18 37369499 37369725 -48619209 - AluJo SINE Alu -3 309 87 204 40 0 0 chr18 37370075 37370100 -48618834 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1133 167 0 54 chr18 37370104 37370293 -48618641 - L1PA15 LINE L1 -13 6152 5975 1335 206 17 30 chr18 37370293 37370594 -48618340 - AluJo SINE Alu -15 297 1 1133 167 0 54 chr18 37370594 37370626 -48618308 - L1PA15 LINE L1 -190 5975 5943 199 70 23 23 chr18 37370626 37370669 -48618265 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 6186 50 1 0 chr18 37370684 37371442 -48617492 - L1PA5 LINE L1 -11 6143 5385 23504 42 9 1 chr18 37371444 37374409 -48614525 + L1PA5 LINE L1 2410 5398 -748 668 150 9 9 chr18 37374402 37374515 -48614419 - L1PA15 LINE L1 -208 5957 5845 * 4647 233 24 3 chr18 37374524 37375681 -48613253 - L1P LINE L1 -1689 4457 3276 1121 163 43 0 chr18 37375685 37375869 -48613065 - AluJb SINE Alu -28 284 93 2622 274 81 31 chr18 37375946 37376980 -48611954 - L1MEc LINE L1 -2419 3796 2816 4123 53 0 0 chr18 37376980 37377492 -48611442 - L1PA6 LINE L1 -2 6152 5641 2622 274 81 31 chr18 37377492 37378181 -48610753 - L1MEc LINE L1 -3399 2816 1977 1869 138 0 43 chr18 37378181 37378486 -48610448 + AluJb SINE Alu 2 293 -19 2622 274 81 31 chr18 37378486 37378819 -48610115 - L1MEc LINE L1 -4238 1977 1662 342 268 88 84 chr18 37378824 37378937 -48609997 - L1MEc LINE L1 -4615 1600 1489 2226 114 3 0 chr18 37378937 37379236 -48609698 - AluSp SINE Alu -13 300 1 342 268 88 84 chr18 37379236 37379372 -48609562 - L1MEc LINE L1 -4726 1489 1350 314 267 63 16 chr18 37379376 37379567 -48609367 - L1MEc LINE L1 -5326 1070 871 587 305 119 35 chr18 37379596 37380215 -48608719 - L1MEc LINE L1 -5578 818 148 1093 185 0 0 chr18 37381544 37381733 -48607201 + MER5A DNA MER1_type 1 189 0 231 231 0 31 chr18 37382187 37382252 -48606682 + CT-rich Low_complexity Low_complexity 1 63 0 407 264 116 37 chr18 37383667 37383883 -48605051 + L2 LINE L2 3080 3312 -1 893 104 0 0 chr18 37383898 37384013 -48604921 + AluSq/x SINE Alu 2 116 -196 1565 154 12 102 chr18 37384017 37384115 -48604819 - LTR9 LTR ERV1 -299 313 208 2317 99 0 0 chr18 37384115 37384419 -48604515 + AluY SINE Alu 1 304 -7 1565 154 12 102 chr18 37384419 37384664 -48604270 - LTR9 LTR ERV1 -404 208 1 2532 209 42 83 chr18 37384665 37385679 -48603255 - L1M4 LINE L1 -1698 4448 3476 2333 88 0 7 chr18 37385697 37386005 -48602929 - AluSc SINE Alu -3 306 1 1827 239 62 11 chr18 37386005 37386469 -48602465 - MLT1E2 LTR MaLR -2 624 137 2645 250 74 28 chr18 37386567 37387705 -48601229 - L1M4 LINE L1 -2683 3463 2274 1775 187 104 150 chr18 37387853 37388176 -48600758 + L1ME3 LINE L1 5340 5676 -486 372 58 19 0 chr18 37388176 37388228 -48600706 + MADE1 DNA Mariner 28 80 0 1775 187 104 150 chr18 37388228 37388347 -48600587 + L1ME3 LINE L1 5676 5799 -363 2272 93 3 3 chr18 37388347 37388647 -48600287 + AluSc SINE Alu 1 300 -9 1775 187 104 150 chr18 37388647 37388867 -48600067 + L1ME3 LINE L1 5799 6051 -111 225 154 0 0 chr18 37388867 37388906 -48600028 + MER3 DNA MER1_type 11 49 -160 1775 187 104 150 chr18 37388906 37389014 -48599920 + L1ME3 LINE L1 6051 6162 0 418 250 10 10 chr18 37389492 37389596 -48599338 - MIR SINE MIR 0 262 159 2440 73 0 10 chr18 37389952 37390266 -48598668 - AluY SINE Alu 0 311 1 2495 217 31 66 chr18 37390372 37390548 -48598386 - MLT1E1 LTR MaLR 0 654 473 594 26 0 0 chr18 37390548 37390624 -48598310 - L1PA5 LINE L1 0 6154 6079 2495 217 31 66 chr18 37390624 37391125 -48597809 - MLT1E1 LTR MaLR -181 473 1 21 0 0 0 chr18 37391232 37391253 -48597681 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr18 37391385 37391408 -48597526 + AT_rich Low_complexity Low_complexity 1 23 0 1994 177 63 42 chr18 37392053 37392528 -48596406 + MLT1D LTR MaLR 21 505 0 434 265 185 19 chr18 37393484 37393646 -48595288 + MER5A DNA MER1_type 1 189 0 2326 98 0 0 chr18 37395071 37395366 -48593568 - AluSg1 SINE Alu -11 298 4 227 128 26 0 chr18 37395507 37395546 -48593388 - Looper DNA T2_type -1410 148 109 1053 187 46 21 chr18 37395974 37396288 -48592646 - L1MC/D LINE L1 -743 5797 5590 589 153 53 100 chr18 37396289 37396439 -48592495 - FLAM_C SINE Alu 0 143 1 379 198 35 0 chr18 37396440 37396526 -48592408 - L1MC/D LINE L1 -942 5598 5510 * 955 202 43 35 chr18 37396512 37396770 -48592164 - L1MC/D LINE L1 -2163 4377 4118 1182 142 0 0 chr18 37396772 37396941 -48591993 - AluSg/x SINE Alu -13 299 131 1198 180 11 39 chr18 37396950 37397234 -48591700 - L1MC/D LINE L1 -2427 4113 3838 2966 238 41 14 chr18 37397240 37398088 -48590846 - L1MC/D LINE L1 -2896 3644 2763 1795 98 16 28 chr18 37398088 37398342 -48590592 - AluSx SINE Alu -14 298 48 2966 238 41 14 chr18 37398342 37398494 -48590440 - L1MC/D LINE L1 -3777 2763 2617 1965 154 0 19 chr18 37398560 37398878 -48590056 - AluJb SINE Alu 0 312 1 811 196 168 49 chr18 37398930 37399216 -48589718 - MER2 DNA MER2_type -25 320 1 2239 174 85 120 chr18 37399216 37400148 -48588786 - L1MC/D LINE L1 -4147 2393 1495 2200 90 0 0 chr18 37400164 37400454 -48588480 - L1PA8A LINE L1 -18 6113 5824 571 69 0 0 chr18 37400454 37400526 -48588408 + L1P LINE L1 4927 4998 -1148 216 0 0 0 chr18 37400567 37400591 -48588343 + (A)n Simple_repeat Simple_repeat 1 24 0 297 75 0 0 chr18 37400927 37400967 -48587967 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr18 37400988 37401009 -48587925 + AT_rich Low_complexity Low_complexity 1 21 0 2396 77 0 10 chr18 37401505 37401804 -48587130 - AluY SINE Alu -13 298 3 231 370 67 8 chr18 37402009 37402128 -48586806 - MIR3 SINE MIR -79 129 4 602 239 8 109 chr18 37402603 37402850 -48586084 - L2 LINE L2 0 3313 3092 414 330 36 23 chr18 37403210 37403397 -48585537 + MER5B DNA MER1_type 1 178 0 329 300 57 7 chr18 37403814 37403954 -48584980 - MIR SINE MIR -17 245 99 190 313 31 0 chr18 37404059 37404123 -48584811 + MIR SINE MIR 36 101 -107 576 259 139 6 chr18 37404128 37404294 -48584640 - MIR SINE MIR 0 262 75 352 264 55 60 chr18 37406285 37406493 -48582441 + MIR SINE MIR 5 206 -56 324 0 0 0 chr18 37406583 37406619 -48582315 + (TG)n Simple_repeat Simple_repeat 1 36 0 6163 122 23 36 chr18 37407279 37408584 -48580350 + L1MA6 LINE L1 4825 6109 -191 565 63 0 25 chr18 37408584 37408663 -48580271 + MADE1 DNA Mariner 1 77 -3 6163 122 23 36 chr18 37408663 37408852 -48580082 + L1MA6 LINE L1 6109 6299 -1 240 86 0 0 chr18 37408974 37409009 -48579925 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 2329 96 0 13 chr18 37411707 37411841 -48577093 + AluSc SINE Alu 1 135 -174 1907 91 0 0 chr18 37411841 37412116 -48576818 + AluY SINE Alu 57 311 0 2329 96 0 13 chr18 37412116 37412293 -48576641 + AluSc SINE Alu 135 308 -1 774 281 91 0 chr18 37412386 37412617 -48576317 + MIR SINE MIR 11 262 0 1107 170 10 26 chr18 37414748 37414942 -48573992 - AluJb SINE Alu -20 292 102 1846 134 28 21 chr18 37415160 37415451 -48573483 + AluJo SINE Alu 5 297 -15 239 313 30 0 chr18 37415527 37415626 -48573308 - L1ME1 LINE L1 -4 6162 6061 275 242 15 12 chr18 37415673 37415755 -48573179 - L1ME3 LINE L1 -102 6062 5980 501 304 94 0 chr18 37415807 37415978 -48572956 - MIR SINE MIR -74 188 2 657 276 42 42 chr18 37416180 37416397 -48572537 - MIR SINE MIR -10 252 36 25 0 0 0 chr18 37417042 37417067 -48571867 + AT_rich Low_complexity Low_complexity 1 25 0 303 49 0 0 chr18 37417125 37417166 -48571768 + (CA)n Simple_repeat Simple_repeat 2 42 0 2019 129 0 3 chr18 37417201 37417529 -48571405 + AluSg SINE Alu 1 327 0 214 294 12 24 chr18 37417564 37417649 -48571285 + (CATATA)n Simple_repeat Simple_repeat 6 89 0 21 0 0 0 chr18 37417761 37417782 -48571152 + AT_rich Low_complexity Low_complexity 1 21 0 595 233 110 22 chr18 37418016 37418244 -48570690 - L1ME3 LINE L1 -219 5951 5704 518 249 117 30 chr18 37418244 37418441 -48570493 + MLT1J2 LTR MaLR 1 214 -236 1312 204 29 0 chr18 37418492 37418772 -48570162 - L1 LINE L1 -2195 3951 3664 3310 162 40 49 chr18 37418772 37419608 -48569326 + LTR1 LTR ERV1 1 785 0 819 176 27 11 chr18 37419608 37419796 -48569138 - L1 LINE L1 -2517 3629 3439 701 329 70 43 chr18 37419808 37420125 -48568809 - L1M4 LINE L1 -5996 546 208 1358 116 74 5 chr18 37420125 37420340 -48568594 + MER30 DNA MER1_type 1 230 0 701 329 70 43 chr18 37420340 37420554 -48568380 - L1M4 LINE L1 -6334 208 1 258 208 28 14 chr18 37420550 37420622 -48568312 + L1 LINE L1 3623 3695 -2451 * 436 255 64 7 chr18 37420678 37420819 -48568115 + L1MC4a LINE L1 3878 4026 -2120 1773 98 0 8 chr18 37420836 37421080 -48567854 + AluSq SINE Alu 63 304 -9 1081 148 0 0 chr18 37421080 37421276 -48567658 + AluSp SINE Alu 134 313 0 424 255 48 21 chr18 37421277 37421422 -48567512 + L1MC4a LINE L1 4018 4166 -1980 963 207 62 31 chr18 37421427 37421683 -48567251 + MLT1B LTR MaLR 1 264 -126 742 218 26 0 chr18 37421683 37421839 -48567095 + L1ME2 LINE L1 5997 6156 -8 2125 134 0 3 chr18 37421897 37422204 -48566730 - AluSx SINE Alu -6 306 1 484 216 144 65 chr18 37422413 37422566 -48566368 - L2 LINE L2 -1 3312 3148 364 269 113 0 chr18 37428243 37428384 -48560550 + L1MC4a LINE L1 5484 5640 -481 1243 192 12 28 chr18 37428389 37428644 -48560290 + AluJo SINE Alu 62 312 0 495 252 64 58 chr18 37428649 37428833 -48560101 + L1MC4a LINE L1 5637 5825 -1983 2183 106 13 0 chr18 37428833 37429136 -48559798 - AluSg SINE Alu -3 307 1 495 252 64 58 chr18 37429136 37429264 -48559670 + L1MC4a LINE L1 5825 5951 -1857 22 0 0 0 chr18 37429326 37429348 -48559586 + AT_rich Low_complexity Low_complexity 1 22 0 191 353 100 11 chr18 37429716 37429985 -48558949 + L2 LINE L2 2148 2440 -874 442 324 157 53 chr18 37430139 37430215 -48558719 - L2 LINE L2 -12 3260 3193 2250 70 3 61 chr18 37430215 37430542 -48558392 - AluSp SINE Alu -5 308 1 442 324 157 53 chr18 37430542 37431350 -48557584 - L2 LINE L2 -79 3193 2285 477 228 15 151 chr18 37432350 37432556 -48556378 - MER5B DNA MER1_type 0 178 1 32 0 0 0 chr18 37432790 37432822 -48556112 + AT_rich Low_complexity Low_complexity 1 32 0 485 285 89 39 chr18 37432946 37433283 -48555651 - L1MC5 LINE L1 -1170 6821 6478 987 240 51 29 chr18 37433293 37433605 -48555329 - LTR9 LTR ERV1 0 612 294 928 160 110 55 chr18 37433711 37433911 -48555023 + AluJo SINE Alu 101 311 -1 10037 220 33 22 chr18 37433926 37438660 -48550274 - L1 LINE L1 -1812 5036 251 2358 78 0 16 chr18 37438857 37439166 -48549768 - AluSg SINE Alu -6 304 1 24 53 0 0 chr18 37439659 37439697 -48549237 + AT_rich Low_complexity Low_complexity 1 38 0 2111 112 14 0 chr18 37439759 37440054 -48548880 - AluSx SINE Alu -13 299 1 198 0 0 0 chr18 37440147 37440169 -48548765 + (TTTTTA)n Simple_repeat Simple_repeat 3 24 0 32038 28 1 0 chr18 37440170 37444775 -48544159 - L1PA4 LINE L1 -3 6152 1541 3587 65 6 0 chr18 37444776 37445256 -48543678 + L1PA4 LINE L1 1056 1538 -4608 1292 236 72 12 chr18 37445247 37445680 -48543254 + L1MDa LINE L1 30 518 -6022 * 1295 214 53 59 chr18 37445677 37446167 -48542767 + L1MDa LINE L1 1016 1502 -5038 * 3255 74 23 0 chr18 37446165 37446712 -48542222 - L1PA8A LINE L1 -649 5482 4926 2215 90 0 0 chr18 37446712 37447001 -48541933 + L1PA8A LINE L1 5824 6113 -18 2006 169 89 126 chr18 37447017 37447951 -48540983 + L1MDa LINE L1 1495 2393 -4147 726 196 168 49 chr18 37447951 37448237 -48540697 + MER2 DNA MER2_type 1 320 -25 2028 147 0 19 chr18 37448289 37448603 -48540331 + AluJb SINE Alu 1 308 -4 277 278 9 0 chr18 37448721 37448829 -48540105 + L1MDa LINE L1 2659 2767 -3773 1684 114 16 28 chr18 37448832 37449086 -48539848 + AluSx SINE Alu 48 298 -14 1946 88 0 4 chr18 37449199 37449448 -48539486 - AluSx SINE Alu -64 248 1 2441 91 0 0 chr18 37450333 37450640 -48538294 - AluSx SINE Alu -5 307 1 308 294 32 24 chr18 37451153 37451279 -48537655 + MIR SINE MIR 83 209 -53 22 0 0 0 chr18 37452268 37452290 -48536644 + AT_rich Low_complexity Low_complexity 1 22 0 404 268 111 44 chr18 37452537 37453014 -48535920 - L1ME4a LINE L1 -44 6077 5569 1924 218 89 62 chr18 37453022 37453750 -48535184 - L1M3e LINE L1 -6282 748 1 389 170 236 0 chr18 37453789 37453895 -48535039 - HAL1 LINE L1 -133 2374 2244 322 267 12 12 chr18 37453915 37454001 -48534933 + CT-rich Low_complexity Low_complexity 2 87 0 1430 180 104 22 chr18 37454173 37454539 -48534395 + L1MA7 LINE L1 5890 6285 -6 1161 278 125 16 chr18 37454545 37455218 -48533716 - HAL1 LINE L1 -599 1908 1163 1787 184 3 7 chr18 37455221 37455525 -48533409 - AluJb SINE Alu -7 305 3 231 253 60 72 chr18 37455532 37455698 -48533236 - HAL1 LINE L1 -1428 1079 916 680 295 126 59 chr18 37455709 37456508 -48532426 - HAL1 LINE L1 -1639 868 16 32 0 0 0 chr18 37456725 37456757 -48532177 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr18 37456926 37456947 -48531987 + AT_rich Low_complexity Low_complexity 1 21 0 2181 133 0 0 chr18 37457539 37457840 -48531094 - AluSx SINE Alu -11 301 1 24 103 0 0 chr18 37458395 37458482 -48530452 + AT_rich Low_complexity Low_complexity 1 87 0 5422 200 30 176 chr18 37459310 37462124 -48526810 + L1MA4A LINE L1 10 2413 -4436 2116 129 0 15 chr18 37462155 37462480 -48526454 - MER1B DNA MER1_type -19 320 1 2898 213 31 15 chr18 37462480 37464255 -48524679 + L1MA4A LINE L1 2413 4289 -2559 * 24710 42 2 0 chr18 37464248 37468237 -48520697 - L1PA4 LINE L1 -2 6153 2158 14036 67 3 0 chr18 37468236 37470107 -48518827 + L1P LINE L1 34 1909 -4237 * 5064 212 63 11 chr18 37470098 37470395 -48518539 + L1MA4A LINE L1 4265 4545 -2460 * 1193 126 70 0 chr18 37470395 37470609 -48518325 + L1PA11 LINE L1 5942 6170 -4 5064 212 63 11 chr18 37470609 37471972 -48516962 + L1MA4A LINE L1 4545 6100 -905 288 0 0 0 chr18 37471972 37472004 -48516930 + (CA)n Simple_repeat Simple_repeat 2 33 0 5064 212 63 11 chr18 37472004 37472955 -48515979 + L1MA4A LINE L1 6100 7000 -5 300 223 68 4 chr18 37472955 37473102 -48515832 + L1MB7 LINE L1 5435 5601 -699 1497 195 40 24 chr18 37473393 37473690 -48515244 + AluJo SINE Alu 6 307 -5 1702 160 34 0 chr18 37473812 37474075 -48514859 + AluSx SINE Alu 1 272 -40 631 301 49 30 chr18 37474180 37474446 -48514488 + AluJo SINE Alu 36 306 -6 1622 200 34 0 chr18 37474575 37474870 -48514064 + AluSq SINE Alu 8 312 -1 27 0 0 0 chr18 37474888 37474915 -48514019 + AT_rich Low_complexity Low_complexity 1 27 0 1802 179 185 8 chr18 37474918 37475348 -48513586 + L1MB7 LINE L1 5599 6130 -54 2069 111 31 0 chr18 37475348 37475637 -48513297 - AluSx SINE Alu -14 298 1 1802 179 185 8 chr18 37475637 37475704 -48513230 + L1MB7 LINE L1 6130 6184 0 1923 160 17 0 chr18 37475887 37476187 -48512747 + AluSx SINE Alu 1 305 -7 1638 197 24 22 chr18 37476330 37476746 -48512188 - L1 LINE L1 -1540 4606 4190 4292 126 32 6 chr18 37476746 37477453 -48511481 + L1PA16 LINE L1 5437 6162 -4 27 49 0 0 chr18 37477470 37477511 -48511423 + AT_rich Low_complexity Low_complexity 1 41 0 216 0 0 0 chr18 37477689 37477713 -48511221 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3709 51 0 0 chr18 37477715 37478167 -48510767 - L1PA6 LINE L1 -11 6143 5692 947 245 78 42 chr18 37480011 37480394 -48508540 - MLT2C1 LTR ERVL 0 397 1 372 147 0 0 chr18 37480402 37480470 -48508464 - ERVL-C1 LTR ERVL -16 5748 5681 38256 72 10 3 chr18 37480478 37486579 -48502355 + L1PA5 LINE L1 4 6152 -2 5642 206 44 16 chr18 37486580 37486926 -48502008 - ERVL-C1 LTR ERVL -78 5686 5351 1672 184 34 3 chr18 37486926 37487220 -48501714 - AluJb SINE Alu -9 303 1 5642 206 44 16 chr18 37487220 37488133 -48500801 - ERVL-C1 LTR ERVL -413 5351 4392 972 232 25 92 chr18 37488166 37488262 -48500672 + L1MD3 LINE L1 6509 6610 -1385 1254 202 46 46 chr18 37488262 37488634 -48500300 - MLT1A2 LTR MaLR 0 374 3 972 232 25 92 chr18 37488634 37488895 -48500039 + L1MD3 LINE L1 6610 6842 -1153 635 170 35 14 chr18 37488906 37489047 -48499887 + L1MD3 LINE L1 7852 7995 0 202 338 42 0 chr18 37490023 37490094 -48498840 - MIR3 SINE MIR -14 194 121 558 54 0 0 chr18 37490342 37490416 -48498518 + (TCTA)n Simple_repeat Simple_repeat 3 76 0 494 325 154 26 chr18 37491043 37491764 -48497170 - L2 LINE L2 -1217 2097 1285 431 299 126 23 chr18 37491901 37492075 -48496859 + MIR SINE MIR 1 192 -70 1151 325 27 46 chr18 37493198 37493782 -48495152 + L2 LINE L2 2430 3000 -313 993 224 34 39 chr18 37493936 37493971 -48494963 + L1ME1 LINE L1 2938 2972 -3174 1896 160 28 0 chr18 37493971 37494259 -48494675 + AluJb SINE Alu 1 296 -16 993 224 34 39 chr18 37494259 37494606 -48494328 + L1ME1 LINE L1 2972 3318 -2828 631 211 75 0 chr18 37494629 37494762 -48494172 + Tigger4(Zombi) DNA MER2_type 1 143 -2588 2557 119 72 8 chr18 37494764 37495233 -48493701 + Tigger4(Zombi) DNA MER2_type 2233 2731 0 2836 226 69 45 chr18 37495236 37496336 -48492598 + L1ME1 LINE L1 3352 4477 -1669 832 167 15 0 chr18 37496352 37496484 -48492450 + AluJo SINE Alu 1 134 -178 1639 209 83 46 chr18 37496494 37497108 -48491826 + L1ME1 LINE L1 4479 5115 -1031 1907 151 3 17 chr18 37497112 37497411 -48491523 + AluSx SINE Alu 1 295 -17 3294 189 18 22 chr18 37497422 37498109 -48490825 + L1ME1 LINE L1 5483 6166 0 373 291 46 46 chr18 37498095 37498357 -48490577 + L1ME LINE L1 5581 5845 -317 * 229 289 40 54 chr18 37498694 37498843 -48490091 + HAL1b LINE L1 745 891 -457 2437 80 0 0 chr18 37499264 37499563 -48489371 + AluSc SINE Alu 2 300 -9 279 374 16 11 chr18 37499563 37499745 -48489189 + L3 LINE CR1 354 536 -1041 24 32 0 0 chr18 37499888 37499919 -48489015 + AT_rich Low_complexity Low_complexity 1 31 0 255 217 74 14 chr18 37499969 37500053 -48488881 + MER5B DNA MER1_type 84 188 -1 1590 224 66 28 chr18 37501716 37501978 -48486956 + L1MD2 LINE L1 5693 5944 -415 2056 100 54 0 chr18 37501978 37502257 -48486677 + AluSg SINE Alu 1 294 -16 1590 224 66 28 chr18 37502257 37502451 -48486483 + L1MD2 LINE L1 5944 6121 -238 2407 77 3 0 chr18 37502451 37502750 -48486184 - AluY SINE Alu -11 300 1 1590 224 66 28 chr18 37502750 37502771 -48486163 + L1MD2 LINE L1 6121 6140 -219 1736 183 88 14 chr18 37502903 37502943 -48485991 - Charlie1b DNA MER1_type -2238 523 487 2264 102 3 0 chr18 37502943 37503237 -48485697 - AluSg SINE Alu -15 295 1 1736 183 88 14 chr18 37503237 37503617 -48485317 - Charlie1b DNA MER1_type -2274 487 72 5648 148 53 4 chr18 37503634 37505007 -48483927 - L1PA16 LINE L1 -9 6157 4724 231 335 121 43 chr18 37506197 37506959 -48481975 + L2 LINE L2 1619 2439 -875 226 194 111 14 chr18 37506960 37507032 -48481902 - MIR SINE MIR -1 261 183 662 274 36 24 chr18 37507050 37507302 -48481632 - MIR SINE MIR 0 262 8 2549 63 0 22 chr18 37507872 37508189 -48480745 - AluY SINE Alu -1 310 1 23 54 0 0 chr18 37509507 37509544 -48479390 + AT_rich Low_complexity Low_complexity 1 37 0 183 291 0 0 chr18 37509838 37509893 -48479041 + L2 LINE L2 3211 3265 -7 2750 241 71 15 chr18 37510021 37510983 -48477951 - L1ME1 LINE L1 -5 6230 5215 5105 247 112 38 chr18 37511002 37511106 -48477828 - L1ME1 LINE L1 -1094 5121 5026 2316 108 0 13 chr18 37511106 37511422 -48477512 - AluSx SINE Alu 0 312 1 5105 247 112 38 chr18 37511422 37511529 -48477405 - L1ME1 LINE L1 -1189 5026 4928 308 43 22 0 chr18 37511529 37511575 -48477359 + (CA)n Simple_repeat Simple_repeat 2 48 0 5105 247 112 38 chr18 37511575 37511869 -48477065 - L1ME1 LINE L1 -1287 4928 4657 2020 160 0 0 chr18 37511869 37512181 -48476753 - AluSx SINE Alu 0 312 1 5105 247 112 38 chr18 37512181 37513465 -48475469 - L1ME1 LINE L1 -1558 4657 3469 1546 192 28 3 chr18 37513465 37513756 -48475178 - AluJb SINE Alu -14 298 1 5105 247 112 38 chr18 37513756 37513879 -48475055 - L1ME1 LINE L1 -2746 3469 3356 1366 209 108 0 chr18 37513879 37514157 -48474777 + AluSx SINE Alu 1 308 -4 5105 247 112 38 chr18 37514157 37515010 -48473924 - L1ME1 LINE L1 -2859 3356 2101 3663 117 19 5 chr18 37515010 37515576 -48473358 - L1PA14 LINE L1 0 6161 5588 5105 247 112 38 chr18 37515576 37515771 -48473163 - L1ME1 LINE L1 -4114 2101 1922 1958 200 51 5 chr18 37515786 37516176 -48472758 + MSTB1 LTR MaLR 25 432 0 406 251 45 63 chr18 37516185 37516408 -48472526 - L1ME1 LINE L1 -5303 902 684 796 182 113 0 chr18 37516735 37516894 -48472040 - MER7A DNA MER2_type -1 345 169 6687 72 8 0 chr18 37516904 37517890 -48471044 - L1PA10 LINE L1 -4 6164 5159 3533 143 40 0 chr18 37517890 37518490 -48470444 + L1PA10 LINE L1 4527 5150 -996 908 187 58 0 chr18 37518490 37518661 -48470273 - MER7A DNA MER2_type -167 179 1 3883 245 88 53 chr18 37518716 37519154 -48469780 + L1M4 LINE L1 3160 3581 -2565 1157 136 45 54 chr18 37519154 37519375 -48469559 - MER20 DNA MER1_type 0 219 1 3883 245 88 53 chr18 37519375 37520704 -48468230 + L1M4 LINE L1 3581 4990 -1156 3206 157 18 23 chr18 37520961 37521529 -48467405 - MER34B LTR ERV1 0 565 1 516 257 85 65 chr18 37521649 37521668 -48467266 + L1MC4a LINE L1 6441 6458 -1503 2544 192 27 62 chr18 37521668 37522302 -48466632 + LTR9 LTR ERV1 1 612 0 516 257 85 65 chr18 37522302 37522649 -48466285 + L1MC4a LINE L1 6458 6791 -1170 189 0 0 0 chr18 37522785 37522806 -48466128 + (A)n Simple_repeat Simple_repeat 1 21 0 21 36 0 0 chr18 37523471 37523499 -48465435 + AT_rich Low_complexity Low_complexity 1 28 0 185 357 45 13 chr18 37524714 37524868 -48464066 - MIR SINE MIR -22 240 82 285 213 0 0 chr18 37524940 37525002 -48463932 - MIR3 SINE MIR -41 167 105 276 333 7 0 chr18 37525058 37525196 -48463738 + (CA)n Simple_repeat Simple_repeat 2 140 0 * 287 335 0 22 chr18 37525112 37525294 -48463640 + (CATA)n Simple_repeat Simple_repeat 1 178 0 * 462 322 0 0 chr18 37525208 37525385 -48463549 + (CA)n Simple_repeat Simple_repeat 1 177 0 467 33 16 0 chr18 37526025 37526086 -48462848 + (CA)n Simple_repeat Simple_repeat 2 63 0 264 229 0 16 chr18 37526817 37526878 -48462056 + (TG)n Simple_repeat Simple_repeat 1 60 0 222 37 0 0 chr18 37527450 37527477 -48461457 + (TG)n Simple_repeat Simple_repeat 1 27 0 217 248 86 29 chr18 37528141 37528246 -48460688 + MER5A DNA MER1_type 23 133 -56 188 197 0 33 chr18 37528593 37528654 -48460280 + (CATA)n Simple_repeat Simple_repeat 4 62 0 231 312 59 32 chr18 37528843 37529029 -48459905 + MIR SINE MIR 48 238 -24 273 219 49 12 chr18 37529498 37529580 -48459354 - L1ME4a LINE L1 -49 6072 5988 185 357 45 0 chr18 37529944 37530056 -48458878 + MIR3 SINE MIR 90 206 -2 186 308 88 11 chr18 37530389 37530480 -48458454 + MIR SINE MIR 123 220 -42 192 97 0 0 chr18 37530485 37530516 -48458418 + (TAA)n Simple_repeat Simple_repeat 3 33 0 490 259 86 27 chr18 37530529 37530749 -48458185 - MIR SINE MIR -10 252 20 1097 282 146 9 chr18 37531154 37532118 -48456816 - L2 LINE L2 0 3313 2200 632 252 0 61 chr18 37533364 37533578 -48455356 - MER3 DNA MER1_type -6 203 3 444 123 0 0 chr18 37533707 37533780 -48455154 + (TG)n Simple_repeat Simple_repeat 2 74 0 886 299 8 0 chr18 37533836 37534080 -48454854 + MIR SINE MIR 17 262 0 244 308 13 0 chr18 37534878 37534956 -48453978 - MIR SINE MIR -124 138 60 223 158 26 0 chr18 37538458 37538496 -48450438 + C-rich Low_complexity Low_complexity 4 42 0 222 196 71 18 chr18 37540434 37540490 -48448444 - MIR SINE MIR -85 177 119 210 118 0 0 chr18 37542350 37542384 -48446550 + (TC)n Simple_repeat Simple_repeat 2 35 0 477 219 0 0 chr18 37542905 37543010 -48445924 + MIR SINE MIR 87 191 -71 182 273 0 0 chr18 37543356 37543400 -48445534 + MER5B DNA MER1_type 88 131 -47 471 250 7 15 chr18 37543984 37544120 -48444814 - MIR SINE MIR -36 226 92 210 143 0 0 chr18 37544576 37544611 -48444323 + (CA)n Simple_repeat Simple_repeat 1 35 0 591 326 46 46 chr18 37544643 37545082 -48443852 - L1MC4a LINE L1 -1908 5900 5462 393 222 12 0 chr18 37545103 37545184 -48443750 + MIR SINE MIR 66 147 -61 237 329 24 0 chr18 37546237 37546322 -48442612 - MIR3 SINE MIR -50 158 72 294 229 24 24 chr18 37546359 37546442 -48442492 - MIR SINE MIR -149 113 31 535 191 26 0 chr18 37546789 37546904 -48442030 + L1 LINE L1 2897 3014 -3132 767 180 41 72 chr18 37547177 37547371 -48441563 - MER5A DNA MER1_type 0 189 2 1184 120 27 5 chr18 37548240 37548424 -48440510 - AluSg/x SINE Alu -2 308 121 2040 125 27 3 chr18 37548439 37548734 -48440200 + AluJo SINE Alu 1 302 -10 1995 140 35 0 chr18 37549036 37549321 -48439613 + AluSx SINE Alu 1 295 -17 23 0 0 0 chr18 37551527 37551550 -48437384 + AT_rich Low_complexity Low_complexity 1 23 0 627 282 93 38 chr18 37552642 37552933 -48436001 - MER4B-int LTR ERV1 -99 4092 3786 590 269 29 12 chr18 37553606 37553777 -48435157 - MER4B-int LTR ERV1 -2790 3968 3795 428 51 17 0 chr18 37554292 37554351 -48434583 + (TG)n Simple_repeat Simple_repeat 1 60 0 21 0 0 0 chr18 37555099 37555120 -48433814 + AT_rich Low_complexity Low_complexity 1 21 0 377 196 30 151 chr18 37555378 37555678 -48433256 - MER46C DNA MER2_type 0 338 16 1274 270 113 6 chr18 37556096 37556607 -48432327 - L1MC4a LINE L1 -1983 5825 5260 2136 98 18 0 chr18 37556796 37557106 -48431828 - AluSg SINE Alu 0 315 1 1818 140 26 10 chr18 37557115 37557423 -48431511 - L1MA4 LINE L1 -5 6295 5983 10527 158 35 32 chr18 37557423 37559502 -48429432 - L1MA4 LINE L1 -949 5197 3112 3102 192 44 11 chr18 37559878 37560507 -48428427 + L1MA10 LINE L1 5525 6330 -4 466 253 54 42 chr18 37560519 37560685 -48428249 - L2 LINE L2 -1324 1990 1823 330 323 129 5 chr18 37560793 37560994 -48427940 - L2 LINE L2 -1756 1558 1333 6141 89 6 4 chr18 37561234 37562066 -48426868 - L1PA12 LINE L1 -1 6167 5334 180 298 0 0 chr18 37562093 37562140 -48426794 - L2 LINE L2 -2259 1055 1009 248 316 26 0 chr18 37562164 37562240 -48426694 + L2 LINE L2 3193 3270 -43 1308 189 75 82 chr18 37562275 37562678 -48426256 - LTR56 LTR ERV1 0 445 44 2879 7 0 0 chr18 37562678 37562985 -48425949 + AluYb8 SINE Alu 1 307 -11 1308 189 75 82 chr18 37562985 37563021 -48425913 - LTR56 LTR ERV1 -401 44 9 11735 166 64 79 chr18 37563122 37565959 -48422975 - LTR56-int LTR ERV1 -92 5699 3302 2487 57 0 3 chr18 37565959 37566258 -48422676 - AluY SINE Alu -13 298 1 11735 166 64 79 chr18 37566258 37566812 -48422122 - LTR56-int LTR ERV1 -2489 3302 2741 2125 136 32 65 chr18 37566803 37567110 -48421824 - LTR56-int LTR ERV1 -4510 1821 1533 * 234 0 0 0 chr18 37567110 37567136 -48421798 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2125 136 32 65 chr18 37567136 37567293 -48421641 - LTR56-int LTR ERV1 -4798 1533 1372 427 291 151 12 chr18 37567467 37567718 -48421216 - MER34B LTR ERV1 -275 290 5 225 108 0 0 chr18 37569942 37569979 -48418955 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 2034 118 11 0 chr18 37569979 37570259 -48418675 - AluSp SINE Alu -30 283 1 233 91 0 45 chr18 37570282 37570326 -48418608 - LTR56 LTR ERV1 -395 50 9 669 351 138 24 chr18 37570404 37571036 -48417898 - L2 LINE L2 -2419 895 192 312 293 81 45 chr18 37571138 37571336 -48417598 + L1MC4a LINE L1 5729 5933 -1875 212 0 36 0 chr18 37571446 37571474 -48417460 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 786 270 154 15 chr18 37571480 37571611 -48417323 - L2 LINE L2 -9 3304 3193 204 40 0 0 chr18 37571611 37571636 -48417298 + (TG)n Simple_repeat Simple_repeat 2 26 0 786 270 154 15 chr18 37571636 37571841 -48417093 - L2 LINE L2 -120 3193 2921 * 954 238 186 9 chr18 37571831 37572159 -48416775 - L2 LINE L2 -838 2476 2091 559 270 0 33 chr18 37573371 37573523 -48415411 + MIR3 SINE MIR 33 179 -29 1770 152 58 81 chr18 37574570 37574859 -48414075 - MER45R DNA AcHobo 0 1581 1304 2110 112 13 7 chr18 37574859 37575163 -48413771 - AluSx SINE Alu 0 312 7 1770 152 58 81 chr18 37575163 37575306 -48413628 - MER45R DNA AcHobo -277 1304 1159 35306 71 8 103 chr18 37575306 37580060 -48408874 - L1PA6 LINE L1 -7 6147 1547 2236 180 17 152 chr18 37580060 37580705 -48408229 - LTR6A LTR ERV1 0 564 1 35306 71 8 103 chr18 37580705 37582109 -48406825 - L1PA6 LINE L1 -4607 1547 11 3816 185 16 16 chr18 37582122 37582868 -48406066 - MER45R DNA AcHobo -406 1175 430 186 71 0 0 chr18 37582961 37582989 -48405945 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 2119 112 31 0 chr18 37582989 37583276 -48405658 - AluSx SINE Alu -16 296 1 469 249 221 6 chr18 37583430 37583611 -48405323 - MIR SINE MIR -6 256 37 651 240 62 44 chr18 37583654 37583879 -48405055 + MIR SINE MIR 33 261 -1 182 402 0 20 chr18 37588217 37588319 -48400615 + L2 LINE L2 1718 1817 -1497 2241 161 51 30 chr18 37588438 37588909 -48400025 - L1MB8 LINE L1 0 6178 5698 2325 72 10 3 chr18 37588925 37589218 -48399716 - AluSp SINE Alu -18 295 1 11190 108 29 27 chr18 37589239 37590688 -48398246 + Tigger1 DNA MER2_type 714 2168 -250 2285 98 3 3 chr18 37590688 37590993 -48397941 + AluSx SINE Alu 1 305 -7 11190 108 29 27 chr18 37590993 37591245 -48397689 + Tigger1 DNA MER2_type 2168 2418 0 191 207 138 35 chr18 37591606 37591664 -48397270 - MIR SINE MIR -151 111 48 2182 91 3 39 chr18 37591746 37592054 -48396880 + AluY SINE Alu 3 299 -12 557 241 92 0 chr18 37592181 37592322 -48396612 + MIR SINE MIR 109 262 0 231 333 43 68 chr18 37592343 37592577 -48396357 + L2 LINE L2 2712 2939 -375 351 411 0 6 chr18 37592612 37592775 -48396159 + L2 LINE L2 3111 3272 0 260 306 0 0 chr18 37593401 37593463 -48395471 + MIR SINE MIR 60 121 -141 289 214 114 0 chr18 37595251 37595321 -48393613 + MIR SINE MIR 44 121 -87 1403 188 62 55 chr18 37596281 37597048 -48391886 - L1MC4 LINE L1 -1 8041 7208 238 333 14 0 chr18 37597600 37597669 -48391265 - L2 LINE L2 -2 3270 3201 191 195 24 0 chr18 37597957 37597998 -48390936 - MIR SINE MIR -59 149 108 198 290 43 58 chr18 37598151 37598220 -48390714 + MIR SINE MIR 2 69 -193 442 319 98 0 chr18 37598622 37598798 -48390136 + MIR SINE MIR 35 226 -36 2287 78 3 3 chr18 37599382 37599690 -48389244 - AluSc SINE Alu 0 309 2 28 48 0 0 chr18 37599859 37599901 -48389033 + AT_rich Low_complexity Low_complexity 1 42 0 643 297 108 0 chr18 37600233 37600455 -48388479 + MIR SINE MIR 12 257 -5 523 262 28 0 chr18 37601322 37601467 -48387467 - MIR SINE MIR -111 151 3 250 215 25 76 chr18 37601843 37601922 -48387012 + MARNA DNA Mariner 112 186 -400 314 256 0 0 chr18 37602036 37602118 -48386816 - MARNA DNA Mariner -215 371 290 333 68 0 0 chr18 37605310 37605354 -48383580 + (T)n Simple_repeat Simple_repeat 1 44 0 25 51 0 0 chr18 37605582 37605621 -48383313 + AT_rich Low_complexity Low_complexity 1 39 0 180 0 0 0 chr18 37606056 37606076 -48382858 + (CGG)n Simple_repeat Simple_repeat 1 20 0 22 35 0 0 chr18 37606732 37606761 -48382173 + AT_rich Low_complexity Low_complexity 1 29 0 303 273 45 34 chr18 37607916 37608004 -48380930 + L1MC4 LINE L1 6614 6702 -1340 27 0 0 0 chr18 37608439 37608466 -48380468 + AT_rich Low_complexity Low_complexity 1 27 0 197 0 0 67 chr18 37608717 37608747 -48380187 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 26 0 0 0 chr18 37609456 37609482 -48379452 + AT_rich Low_complexity Low_complexity 1 26 0 399 89 0 0 chr18 37609744 37609800 -48379134 + (CA)n Simple_repeat Simple_repeat 2 57 0 258 32 0 0 chr18 37611075 37611106 -48377828 + (GGGA)n Simple_repeat Simple_repeat 4 34 0 629 222 113 27 chr18 37613186 37613371 -48375563 + MIR SINE MIR 41 241 -21 259 274 49 49 chr18 37613680 37613782 -48375152 - MIR3 SINE MIR -43 165 64 308 284 53 0 chr18 37613897 37613992 -48374942 + L2 LINE L2 3148 3247 -25 693 253 137 29 chr18 37614345 37614972 -48373962 + L2 LINE L2 2420 3294 -19 23 0 0 0 chr18 37615865 37615888 -48373046 + GC_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr18 37616100 37616129 -48372805 + GC_rich Low_complexity Low_complexity 1 29 0 349 262 107 10 chr18 37617578 37617681 -48371253 + L2 LINE L2 3157 3269 -3 237 224 47 47 chr18 37618369 37618454 -48370480 - L2 LINE L2 -37 3276 3192 219 254 55 0 chr18 37618523 37618578 -48370356 + MIR3 SINE MIR 112 169 -39 228 285 43 0 chr18 37619858 37619948 -48368986 + MIR SINE MIR 88 147 -61 1665 210 46 31 chr18 37620193 37620583 -48368351 + MSTD LTR MaLR 1 396 0 257 241 17 0 chr18 37620844 37620902 -48368032 + MIR SINE MIR 74 132 -76 1466 165 101 28 chr18 37621041 37621380 -48367554 + MLT2C1 LTR ERVL 1 480 -40 252 300 0 0 chr18 37621380 37621440 -48367494 + (TA)n Simple_repeat Simple_repeat 2 61 0 251 163 0 20 chr18 37621444 37621493 -48367441 + MLT2C1 LTR ERVL 350 397 0 349 289 169 6 chr18 37622529 37622695 -48366239 - MIR SINE MIR -7 255 63 283 306 38 23 chr18 37623038 37623177 -48365757 + MIR3 SINE MIR 42 179 -29 241 271 21 64 chr18 37624096 37624236 -48364698 + GA-rich Low_complexity Low_complexity 2 135 0 233 311 15 76 chr18 37625144 37625276 -48363658 - MIR SINE MIR -55 207 84 252 274 83 0 chr18 37626155 37626239 -48362695 - L3 LINE CR1 -350 1227 1137 183 306 54 54 chr18 37626640 37626751 -48362183 + MIR3 SINE MIR 94 204 -4 359 336 49 52 chr18 37628071 37628265 -48360669 + MIR SINE MIR 13 207 -55 362 307 0 0 chr18 37628581 37628669 -48360265 + L1MC4 LINE L1 6615 6702 -1340 184 302 0 0 chr18 37630113 37630156 -48358778 + L3 LINE CR1 1240 1282 -295 199 226 94 0 chr18 37630505 37630558 -48358376 - L3 LINE CR1 -171 1406 1349 1952 128 7 3 chr18 37632027 37632315 -48356619 - AluJo SINE Alu -23 289 1 325 331 115 14 chr18 37633181 37633329 -48355605 - L2 LINE L2 -3 3269 3107 533 198 0 6 chr18 37633485 37633642 -48355292 + (TGGA)n Simple_repeat Simple_repeat 4 159 0 384 216 0 0 chr18 37633665 37633767 -48355167 + (TGGA)n Simple_repeat Simple_repeat 1 102 0 209 360 0 0 chr18 37634289 37634414 -48354520 + (TG)n Simple_repeat Simple_repeat 2 126 0 564 250 0 0 chr18 37635251 37635427 -48353507 + (TCCA)n Simple_repeat Simple_repeat 3 178 0 510 229 12 6 chr18 37635474 37635550 -48353384 + (TCCA)n Simple_repeat Simple_repeat 1 75 -96 1891 133 13 7 chr18 37635550 37635859 -48353075 - AluY SINE Alu 0 311 1 510 229 12 6 chr18 37635859 37635952 -48352982 + (TCCA)n Simple_repeat Simple_repeat 75 171 0 186 364 52 48 chr18 37636046 37636376 -48352558 - L2 LINE L2 -90 3182 2852 264 289 41 0 chr18 37636470 37636567 -48352367 - MIR SINE MIR -115 147 47 582 54 0 0 chr18 37637241 37637315 -48351619 + (TCCA)n Simple_repeat Simple_repeat 1 74 0 289 272 44 37 chr18 37637568 37637704 -48351230 + MER5A DNA MER1_type 35 171 -18 206 290 0 16 chr18 37637962 37638024 -48350910 + GA-rich Low_complexity Low_complexity 5 65 0 207 224 0 52 chr18 37638044 37638160 -48350774 + A-rich Low_complexity Low_complexity 5 114 0 376 263 124 18 chr18 37639617 37639793 -48349141 + MIR SINE MIR 20 210 -52 228 262 16 0 chr18 37639823 37639884 -48349050 - MIR SINE MIR -122 140 79 273 292 0 0 chr18 37640168 37640240 -48348694 + L2 LINE L2 3185 3256 -16 575 282 78 19 chr18 37641273 37641479 -48347455 + MIR SINE MIR 2 219 -43 349 324 115 14 chr18 37642246 37642385 -48346549 - MIR3 SINE MIR -50 158 6 215 306 0 0 chr18 37643051 37643113 -48345821 - L3b LINE CR1 -181 1402 1341 186 209 0 0 chr18 37644102 37644145 -48344789 + (CA)n Simple_repeat Simple_repeat 2 44 0 * 288 138 0 0 chr18 37644144 37644209 -48344725 + (GA)n Simple_repeat Simple_repeat 2 66 0 421 127 127 0 chr18 37645126 37645197 -48343737 - MADE1 DNA Mariner 0 80 1 372 381 0 0 chr18 37647250 37647405 -48341529 + MIR3 SINE MIR 7 161 -47 184 254 99 28 chr18 37649980 37650051 -48338883 + L2 LINE L2 3150 3225 -47 524 260 6 11 chr18 37650359 37650540 -48338394 + (TG)n Simple_repeat Simple_repeat 1 180 0 207 100 0 0 chr18 37652419 37652449 -48336485 + (T)n Simple_repeat Simple_repeat 1 30 0 357 252 0 0 chr18 37652569 37652672 -48336262 + CT-rich Low_complexity Low_complexity 2 104 0 819 46 0 0 chr18 37652981 37653089 -48335845 + (TCCA)n Simple_repeat Simple_repeat 1 108 0 236 231 115 48 chr18 37653089 37653186 -48335748 - L2 LINE L2 -17 3255 3149 295 59 20 20 chr18 37654244 37654295 -48334639 + (TCCC)n Simple_repeat Simple_repeat 3 53 0 293 211 7 21 chr18 37654697 37654839 -48334095 + (TG)n Simple_repeat Simple_repeat 1 140 0 1255 158 181 19 chr18 37655481 37655741 -48333193 - AluJo SINE Alu 0 302 1 182 250 0 29 chr18 37657211 37657279 -48331655 + (CCA)n Simple_repeat Simple_repeat 3 68 0 528 341 0 17 chr18 37657330 37657509 -48331425 + (CACCAT)n Simple_repeat Simple_repeat 1 176 0 320 0 25 0 chr18 37657804 37657844 -48331090 + (TG)n Simple_repeat Simple_repeat 1 41 0 2024 148 0 0 chr18 37658512 37658810 -48330124 + AluSx SINE Alu 1 298 -14 203 171 0 0 chr18 37659557 37659592 -48329342 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 257 340 141 26 chr18 37659877 37660068 -48328866 - L3 LINE CR1 -108 1469 1257 343 297 45 76 chr18 37660512 37660802 -48328132 + L3 LINE CR1 1291 1571 -6 186 43 0 0 chr18 37661062 37661085 -48327849 + (TG)n Simple_repeat Simple_repeat 2 24 0 294 73 0 0 chr18 37661269 37661310 -48327624 + (CA)n Simple_repeat Simple_repeat 1 41 0 287 211 84 108 chr18 37661691 37661857 -48327077 + MIR SINE MIR 46 207 -55 423 0 0 0 chr18 37662385 37662432 -48326502 + (TG)n Simple_repeat Simple_repeat 2 48 0 273 261 14 0 chr18 37662613 37662682 -48326252 + (TG)n Simple_repeat Simple_repeat 2 71 0 185 286 81 71 chr18 37662868 37663078 -48325856 + L2 LINE L2 2834 3045 -227 207 0 0 0 chr18 37667737 37667760 -48321174 + (CAA)n Simple_repeat Simple_repeat 2 24 0 286 297 167 59 chr18 37668604 37668994 -48319940 - L2 LINE L2 0 3272 2841 438 229 90 109 chr18 37669313 37669746 -48319188 + MER110 LTR ERV1 70 479 -12 2096 123 0 16 chr18 37670654 37670963 -48317971 - AluSx SINE Alu 0 312 9 754 131 20 10 chr18 37671427 37671679 -48317255 + AluJo SINE Alu 12 311 -1 196 245 0 38 chr18 37671694 37671747 -48317187 - MIR SINE MIR -204 58 8 2374 71 0 0 chr18 37671995 37672290 -48316644 + AluY SINE Alu 1 295 -16 2212 78 37 0 chr18 37672816 37673110 -48315824 - AluY SINE Alu -6 305 1 344 325 155 16 chr18 37673209 37673403 -48315531 - MIR SINE MIR -16 246 26 203 311 0 16 chr18 37674071 37674132 -48314802 + (TG)n Simple_repeat Simple_repeat 2 61 0 2062 108 0 0 chr18 37674446 37674723 -48314211 + AluSx SINE Alu 1 277 -35 246 32 0 0 chr18 37675055 37675086 -48313848 + (CAGCC)n Simple_repeat Simple_repeat 1 31 0 274 208 228 20 chr18 37676197 37676298 -48312636 - L2 LINE L2 -259 3054 2933 6151 90 2 0 chr18 37676330 37677194 -48311740 + THE1B-int LTR MaLR 715 1580 0 2234 111 60 28 chr18 37677194 37677547 -48311387 + THE1B LTR MaLR 1 364 0 190 282 223 48 chr18 37677771 37677874 -48311060 + L2 LINE L2 3142 3262 -10 1963 117 22 0 chr18 37677876 37678181 -48310753 + AluSg SINE Alu 1 311 0 1602 153 41 27 chr18 37678389 37678683 -48310251 - AluJo SINE Alu -1 311 14 1430 123 0 0 chr18 37678704 37678899 -48310035 - AluSc SINE Alu -112 197 3 2137 112 0 23 chr18 37678901 37679206 -48309728 - AluSx SINE Alu -13 299 2 455 244 187 34 chr18 37679511 37679720 -48309214 - MIR SINE MIR -2 260 20 259 390 42 35 chr18 37679824 37680083 -48308851 + MIR SINE MIR 2 262 0 2311 102 0 0 chr18 37684536 37684840 -48304094 - AluSx SINE Alu -8 304 1 201 337 82 20 chr18 37684940 37685038 -48303896 + L3 LINE CR1 814 917 -660 445 257 61 34 chr18 37685038 37685186 -48303748 + L3 LINE CR1 1327 1478 -99 241 306 194 8 chr18 37685734 37685858 -48303076 - MIR SINE MIR -97 165 19 234 62 0 0 chr18 37686234 37686266 -48302668 + (TGG)n Simple_repeat Simple_repeat 2 33 0 204 125 0 0 chr18 37686733 37686765 -48302169 + (T)n Simple_repeat Simple_repeat 1 32 0 947 364 112 12 chr18 37689490 37690353 -48298581 - L3 LINE CR1 -4 1573 624 5216 51 0 2 chr18 37691069 37691699 -48297235 + L1PA5 LINE L1 5526 6154 0 24 53 0 0 chr18 37691848 37691886 -48297048 + AT_rich Low_complexity Low_complexity 1 38 0 255 245 66 86 chr18 37692066 37692217 -48296717 - MIR SINE MIR -55 207 60 362 272 64 16 chr18 37692598 37692723 -48296211 - MIR SINE MIR -62 200 70 448 315 155 0 chr18 37694541 37694760 -48294174 - MIR SINE MIR -6 256 4 374 322 18 18 chr18 37696041 37696212 -48292722 + GA-rich Low_complexity Low_complexity 6 176 0 276 246 29 129 chr18 37696378 37696549 -48292385 + MER5B DNA MER1_type 1 154 -24 188 231 77 39 chr18 37698182 37698260 -48290674 + L2 LINE L2 3190 3270 -2 225 0 0 0 chr18 37698562 37698587 -48290347 + (A)n Simple_repeat Simple_repeat 1 25 0 802 148 27 3 chr18 37699582 37700226 -48288708 + (TCCA)n Simple_repeat Simple_repeat 1 659 0 251 266 0 16 chr18 37700358 37700422 -48288512 - L2 LINE L2 -216 3056 2994 635 248 111 21 chr18 37701145 37701379 -48287555 - MIR SINE MIR 0 262 8 342 0 0 0 chr18 37702077 37702115 -48286819 + (TATG)n Simple_repeat Simple_repeat 2 39 0 702 145 48 32 chr18 37702115 37702239 -48286695 - FLAM_C SINE Alu -16 127 2 395 300 62 38 chr18 37702701 37702861 -48286073 - MIR SINE MIR -43 219 56 2366 100 0 25 chr18 37704118 37704438 -48284496 + AluSx SINE Alu 1 312 0 344 200 0 42 chr18 37707439 37707559 -48281375 + CT-rich Low_complexity Low_complexity 1 115 0 446 246 154 29 chr18 37711829 37712069 -48276865 + L2 LINE L2 3005 3274 -39 24 0 0 0 chr18 37712909 37712933 -48276001 + AT_rich Low_complexity Low_complexity 1 24 0 1057 217 0 0 chr18 37717463 37717670 -48271264 + MIR SINE MIR 21 227 -35 302 325 58 7 chr18 37718801 37718955 -48269979 + MARNA DNA Mariner 322 483 -103 459 249 291 5 chr18 37719153 37719342 -48269592 + MIR SINE MIR 20 262 0 203 328 0 0 chr18 37720582 37720643 -48268291 + MIR SINE MIR 89 149 -113 191 263 84 32 chr18 37720907 37721002 -48267932 + MIR SINE MIR 47 146 -62 364 377 60 0 chr18 37721640 37721823 -48267111 - MIR SINE MIR -68 194 1 192 125 0 0 chr18 37722212 37722244 -48266690 + (ATGGTG)n Simple_repeat Simple_repeat 4 35 0 358 344 31 0 chr18 37724665 37724793 -48264141 - MIR3 SINE MIR 0 208 77 215 333 0 0 chr18 37724874 37724946 -48263988 + CT-rich Low_complexity Low_complexity 2 73 0 313 285 76 41 chr18 37725473 37725645 -48263289 - L3 LINE CR1 -15 1562 1385 308 358 173 25 chr18 37725627 37726612 -48262322 + L2 LINE L2 1733 2862 -452 * 318 313 104 38 chr18 37726705 37726993 -48261941 + L2 LINE L2 2946 3252 -61 352 286 20 10 chr18 37728368 37728466 -48260468 + L2 LINE L2 3174 3272 0 281 243 9 0 chr18 37735381 37735488 -48253446 + (TG)n Simple_repeat Simple_repeat 1 108 0 193 271 102 0 chr18 37735778 37735837 -48253097 + MIR SINE MIR 86 150 -112 1313 117 0 0 chr18 37737603 37737782 -48251152 - AluJb SINE Alu -2 310 132 288 0 0 0 chr18 37738417 37738449 -48250485 + (TG)n Simple_repeat Simple_repeat 2 33 0 203 194 0 0 chr18 37741970 37742006 -48246928 + T-rich Low_complexity Low_complexity 1 36 0 221 129 57 0 chr18 37742663 37742733 -48246201 + (TA)n Simple_repeat Simple_repeat 1 74 0 202 236 18 18 chr18 37745042 37745097 -48243837 - MIR SINE MIR -69 139 85 218 327 175 14 chr18 37745453 37745670 -48243264 + L2 LINE L2 2594 2845 -469 235 289 237 0 chr18 37747458 37747610 -48241324 + MIR SINE MIR 66 253 -9 2649 193 17 4 chr18 37747687 37748210 -48240724 + L1MB5 LINE L1 5614 6143 -31 195 100 0 0 chr18 37750054 37750084 -48238850 + (GAAA)n Simple_repeat Simple_repeat 2 31 0 254 234 45 19 chr18 37750436 37750590 -48238344 + CT-rich Low_complexity Low_complexity 3 160 0 300 323 62 58 chr18 37750608 37750899 -48238035 - HAL1 LINE L1 -1205 1302 1011 211 240 20 0 chr18 37750899 37750949 -48237985 + CT-rich Low_complexity Low_complexity 4 54 0 193 386 13 18 chr18 37751643 37751871 -48237063 + L2 LINE L2 2827 3053 -219 360 0 0 0 chr18 37751998 37752038 -48236896 + (TG)n Simple_repeat Simple_repeat 2 41 0 280 346 20 72 chr18 37752461 37752614 -48236320 - L2 LINE L2 -11 3261 3117 28 0 0 0 chr18 37752934 37752962 -48235972 + AT_rich Low_complexity Low_complexity 1 28 0 208 320 93 0 chr18 37753968 37754065 -48234869 + L2 LINE L2 3208 3313 0 247 326 109 0 chr18 37754300 37754438 -48234496 + L2 LINE L2 2929 3081 -191 264 268 31 41 chr18 37754687 37754784 -48234150 - MIR SINE MIR -136 126 31 453 177 13 0 chr18 37755571 37755650 -48233284 - MER81 DNA DNA -32 82 3 206 286 54 0 chr18 37758428 37758484 -48230450 - MIR SINE MIR -59 149 91 440 250 33 8 chr18 37759186 37759306 -48229628 + MIR3 SINE MIR 68 190 -18 21 57 0 0 chr18 37759541 37759576 -48229358 + AT_rich Low_complexity Low_complexity 1 35 0 271 365 68 14 chr18 37760090 37760238 -48228696 + MIR SINE MIR 105 260 -2 273 288 12 0 chr18 37762128 37762208 -48226726 + MIR SINE MIR 179 259 -3 328 278 21 10 chr18 37763323 37763420 -48225514 + MIR3 SINE MIR 61 158 -50 211 195 0 0 chr18 37764059 37764100 -48224834 - L2 LINE L2 -19 3253 3213 282 125 0 0 chr18 37764796 37764844 -48224090 + (GGA)n Simple_repeat Simple_repeat 1 48 0 785 292 106 31 chr18 37764973 37765481 -48223453 + L2 LINE L2 2774 3313 0 246 220 85 0 chr18 37765958 37766017 -48222917 + MIR SINE MIR 118 181 -81 304 321 124 19 chr18 37766948 37767213 -48221721 + L1MC4a LINE L1 5607 5899 -1909 312 255 58 85 chr18 37767256 37767444 -48221490 + L1ME4a LINE L1 5939 6121 0 368 226 85 0 chr18 37769407 37769513 -48219421 + MER5B DNA MER1_type 2 116 -62 183 129 0 0 chr18 37772904 37772935 -48215999 + (TG)n Simple_repeat Simple_repeat 2 32 0 2246 117 0 0 chr18 37774443 37774750 -48214184 + AluSg SINE Alu 2 308 -2 651 330 56 4 chr18 37774846 37775079 -48213855 - MIR SINE MIR -1 261 17 815 197 6 0 chr18 37775362 37775540 -48213394 + C-rich Low_complexity Low_complexity 2 180 0 222 214 0 54 chr18 37775560 37775616 -48213318 + CT-rich Low_complexity Low_complexity 2 54 0 205 287 21 21 chr18 37776648 37776742 -48212192 + L2 LINE L2 3139 3232 -40 229 286 52 0 chr18 37776810 37776887 -48212047 + MIR SINE MIR 95 175 -87 * 255 296 28 0 chr18 37776883 37776954 -48211980 + L2 LINE L2 3200 3272 0 2372 84 0 3 chr18 37777587 37777898 -48211036 - AluY SINE Alu -1 310 1 256 123 0 35 chr18 37779440 37779497 -48209437 + (GGGA)n Simple_repeat Simple_repeat 1 55 0 196 363 26 0 chr18 37779814 37779927 -48209007 + L2 LINE L2 2965 3080 -192 189 315 9 56 chr18 37780119 37780227 -48208707 - MIR SINE MIR -132 130 28 282 241 145 0 chr18 37780705 37780788 -48208146 + MIR SINE MIR 51 145 -63 1873 87 140 0 chr18 37781273 37781538 -48207396 + AluSx SINE Alu 1 302 0 305 301 110 25 chr18 37781557 37781720 -48207214 + MIR SINE MIR 60 236 -26 501 301 94 10 chr18 37782700 37782903 -48206031 + MIR SINE MIR 8 227 -35 686 256 135 0 chr18 37786221 37786428 -48202506 - MIR SINE MIR 0 262 28 198 209 0 0 chr18 37787375 37787418 -48201516 + T-rich Low_complexity Low_complexity 3 45 0 226 288 36 9 chr18 37787428 37787539 -48201395 + CT-rich Low_complexity Low_complexity 1 114 0 2149 171 98 7 chr18 37788101 37788529 -48200405 - MLT1C LTR MaLR 0 467 1 886 130 284 0 chr18 37788732 37788901 -48200033 + MER20 DNA MER1_type 1 217 -2 187 163 61 41 chr18 37788975 37789024 -48199910 + L2 LINE L2 2752 2801 -513 186 171 49 0 chr18 37789253 37789294 -48199640 - MIR SINE MIR -135 73 31 278 277 82 50 chr18 37789936 37790095 -48198839 + MIR3 SINE MIR 42 205 -3 331 298 133 6 chr18 37792823 37792981 -48195953 + MER5A DNA MER1_type 12 189 0 1678 257 55 13 chr18 37793007 37793478 -48195456 - LTR16C LTR ERVL 0 491 1 269 296 94 22 chr18 37793558 37793750 -48195184 - MIR SINE MIR -26 236 30 291 274 42 11 chr18 37793951 37794046 -48194888 + MIR SINE MIR 31 128 -80 362 266 18 36 chr18 37794273 37794483 -48194451 - MLT1J LTR MaLR -331 180 4 239 302 57 9 chr18 37795193 37795299 -48193635 + L3 LINE CR1 1405 1515 -62 528 274 43 34 chr18 37795560 37795768 -48193166 + MIR SINE MIR 43 252 -10 293 320 19 51 chr18 37796432 37796588 -48192346 - L2 LINE L2 -4 3309 3159 270 0 0 0 chr18 37797340 37797370 -48191564 + (TC)n Simple_repeat Simple_repeat 2 31 0 468 0 0 0 chr18 37797372 37797424 -48191510 + (CA)n Simple_repeat Simple_repeat 1 52 0 371 375 104 7 chr18 37799059 37799282 -48189652 + L3 LINE CR1 903 1166 -411 2458 111 16 29 chr18 37799282 37799662 -48189272 + THE1C LTR MaLR 1 375 0 371 375 104 7 chr18 37799662 37799745 -48189189 + L3 LINE CR1 1166 1239 -338 244 312 11 11 chr18 37800198 37800291 -48188643 + (CA)n Simple_repeat Simple_repeat 2 94 0 588 310 50 56 chr18 37801341 37801660 -48187274 + L2 LINE L2 2947 3263 -9 21 0 0 0 chr18 37803066 37803087 -48185847 + AT_rich Low_complexity Low_complexity 1 21 0 201 250 0 67 chr18 37803192 37803252 -48185682 - MIR SINE MIR -59 149 94 211 330 25 86 chr18 37804681 37804878 -48184056 + MIR SINE MIR 46 230 -32 613 200 15 15 chr18 37804991 37805126 -48183808 + MER45A DNA AcHobo 13 147 -31 206 279 221 0 chr18 37805177 37805281 -48183653 + L2 LINE L2 3167 3293 -20 1120 63 23 35 chr18 37805336 37805510 -48183424 + MER30 DNA MER1_type 1 172 -58 233 300 92 0 chr18 37806180 37806310 -48182624 + MIR SINE MIR 60 207 -1 219 308 37 28 chr18 37806352 37806459 -48182475 + MIR SINE MIR 38 145 -63 2774 81 16 8 chr18 37806648 37807019 -48181915 + THE1C LTR MaLR 1 374 -1 250 257 177 0 chr18 37811512 37811620 -48177314 + MIR SINE MIR 29 152 -61 25 0 0 0 chr18 37813484 37813509 -48175425 + AT_rich Low_complexity Low_complexity 1 25 0 253 348 72 14 chr18 37815907 37816045 -48172889 + MIR SINE MIR 117 262 0 195 100 0 0 chr18 37816700 37816730 -48172204 + (CA)n Simple_repeat Simple_repeat 1 30 0 386 230 6 17 chr18 37816794 37816972 -48171962 + (CA)n Simple_repeat Simple_repeat 1 176 0 319 277 15 7 chr18 37817817 37817954 -48170980 + GA-rich Low_complexity Low_complexity 1 138 0 193 114 0 45 chr18 37818012 37818056 -48170878 + (CATA)n Simple_repeat Simple_repeat 4 45 0 201 324 0 0 chr18 37818060 37818128 -48170806 + (CA)n Simple_repeat Simple_repeat 2 69 0 973 259 136 6 chr18 37818446 37818763 -48170171 + L2 LINE L2 2924 3281 -32 235 296 99 0 chr18 37819140 37819278 -48169656 + MIR3 SINE MIR 37 189 -19 193 338 150 0 chr18 37820820 37820953 -48167981 + MIR SINE MIR 60 212 -50 189 107 0 0 chr18 37821268 37821296 -48167638 + (TGAG)n Simple_repeat Simple_repeat 4 31 0 219 141 0 94 chr18 37821510 37821574 -48167360 + (GGGAGA)n Simple_repeat Simple_repeat 5 62 0 583 313 104 6 chr18 37821614 37821842 -48167092 - MIR SINE MIR 0 262 15 299 256 39 0 chr18 37822234 37822312 -48166622 + MIR SINE MIR 108 188 -74 276 30 0 0 chr18 37823608 37823641 -48165293 + (TG)n Simple_repeat Simple_repeat 1 33 0 581 215 195 0 chr18 37824111 37824260 -48164674 - MIR SINE MIR -38 224 47 189 0 0 0 chr18 37824528 37824549 -48164385 + (GGGAGA)n Simple_repeat Simple_repeat 3 23 0 351 0 0 0 chr18 37826944 37826983 -48161951 + (CA)n Simple_repeat Simple_repeat 2 40 0 324 307 35 18 chr18 37827305 37827419 -48161515 - MIR SINE MIR -60 202 87 186 224 0 0 chr18 37827444 37827493 -48161441 + (TAGG)n Simple_repeat Simple_repeat 1 49 0 189 245 0 0 chr18 37828816 37828865 -48160069 + (CA)n Simple_repeat Simple_repeat 2 50 0 535 302 0 0 chr18 37829070 37829199 -48159735 + MIR3 SINE MIR 62 190 -18 211 287 74 57 chr18 37829981 37830060 -48158874 + MIR3 SINE MIR 67 150 -58 1698 163 70 57 chr18 37830060 37830429 -48158505 - MLT1A2 LTR MaLR 0 374 1 211 287 74 57 chr18 37830429 37830471 -48158463 + MIR3 SINE MIR 150 190 -18 432 350 52 0 chr18 37831728 37831922 -48157012 + MIR SINE MIR 47 250 -12 228 304 0 0 chr18 37834548 37834617 -48154317 - L3 LINE CR1 -113 1464 1396 246 361 39 39 chr18 37834731 37834861 -48154073 - L2 LINE L2 -30 3242 3113 268 368 55 12 chr18 37834897 37835060 -48153874 + MIR3 SINE MIR 23 192 -16 296 302 40 63 chr18 37836346 37836472 -48152462 + MIR SINE MIR 78 200 -62 2472 73 0 6 chr18 37836589 37836902 -48152032 + AluY SINE Alu 1 311 0 218 215 0 15 chr18 37837077 37837142 -48151792 + GA-rich Low_complexity Low_complexity 6 69 0 319 337 166 6 chr18 37837155 37837330 -48151604 - MIR SINE MIR -14 248 46 773 208 122 5 chr18 37840574 37840771 -48148163 + MER45C DNA AcHobo 4 223 -730 683 282 115 28 chr18 37840927 37841179 -48147755 + MER45C DNA AcHobo 468 741 -212 1322 196 3 10 chr18 37841281 37841572 -48147362 + MER45B DNA AcHobo 708 996 -44 240 200 0 0 chr18 37842374 37842429 -48146505 + CT-rich Low_complexity Low_complexity 2 56 0 212 259 56 56 chr18 37842489 37842597 -48146337 - L2 LINE L2 -217 3055 2948 244 196 0 87 chr18 37844192 37844284 -48144650 + CT-rich Low_complexity Low_complexity 3 86 0 355 309 22 7 chr18 37845522 37845658 -48143276 + MIR SINE MIR 47 184 -78 2152 164 37 16 chr18 37845858 37846235 -48142699 - MLT1B LTR MaLR -2 388 4 190 320 90 0 chr18 37846617 37846695 -48142239 + MIR SINE MIR 108 192 -70 259 297 69 0 chr18 37847496 37847597 -48141337 + MIR SINE MIR 59 166 -96 185 62 0 31 chr18 37848668 37848700 -48140234 + (CCCCCT)n Simple_repeat Simple_repeat 5 35 0 2424 63 3 0 chr18 37850096 37850397 -48138537 - AluY SINE Alu -9 302 1 223 322 12 23 chr18 37851980 37852151 -48136783 + GA-rich Low_complexity Low_complexity 1 169 0 * 326 338 7 7 chr18 37852035 37852174 -48136760 + G-rich Low_complexity Low_complexity 5 143 0 496 325 57 9 chr18 37852998 37853044 -48135890 - MIR SINE MIR -13 249 207 2195 102 0 16 chr18 37853044 37853347 -48135587 - AluSq SINE Alu -15 298 1 496 325 57 9 chr18 37853347 37853512 -48135422 - MIR SINE MIR -55 207 28 221 263 40 13 chr18 37853716 37853792 -48135142 - L2 LINE L2 -167 3105 3028 223 171 0 0 chr18 37855133 37855174 -48133760 + (TCTCTG)n Simple_repeat Simple_repeat 4 44 0 1994 129 6 26 chr18 37855971 37856282 -48132652 - AluSx SINE Alu 0 312 8 2423 68 0 6 chr18 37858314 37858625 -48130309 - AluY SINE Alu 0 311 3 2322 75 0 3 chr18 37858650 37858944 -48129990 - AluSg SINE Alu -12 298 6 313 319 26 18 chr18 37861150 37861263 -48127671 - MIR SINE MIR -75 187 74 333 296 75 20 chr18 37864795 37864950 -48123984 - MIR3 SINE MIR -58 150 5 666 265 199 8 chr18 37869604 37869970 -48118964 + L2 LINE L2 2871 3306 -7 2180 101 0 3 chr18 37870015 37870312 -48118622 + AluSx SINE Alu 1 296 -16 199 339 15 0 chr18 37871523 37871588 -48117346 - L2 LINE L2 0 3272 3207 626 278 215 30 chr18 37871619 37871798 -48117136 - L2 LINE L2 -339 2975 2830 2109 102 16 33 chr18 37871798 37872103 -48116831 - AluSx SINE Alu -12 300 1 626 278 215 30 chr18 37872103 37872323 -48116611 - L2 LINE L2 -484 2830 2502 940 218 78 41 chr18 37872695 37872989 -48115945 + L1ME2 LINE L1 5850 6154 -10 504 203 22 72 chr18 37873888 37874026 -48114908 - MER94 DNA DNA -1 133 3 1340 189 0 121 chr18 37874045 37874400 -48114534 + AluSx SINE Alu 1 312 0 366 294 40 16 chr18 37874841 37874967 -48113967 + MIR SINE MIR 66 194 -68 460 334 220 19 chr18 37875870 37876352 -48112582 + L3 LINE CR1 185 763 -814 183 204 0 0 chr18 37876554 37876603 -48112331 + (TTGG)n Simple_repeat Simple_repeat 2 50 0 1650 235 38 16 chr18 37876935 37877386 -48111548 + MLT1C LTR MaLR 6 466 -1 21 36 0 0 chr18 37877681 37877709 -48111225 + AT_rich Low_complexity Low_complexity 1 28 0 1638 200 80 37 chr18 37878301 37878651 -48110283 - MLT1A1 LTR MaLR 0 365 1 2243 88 7 13 chr18 37879334 37879641 -48109293 + AluSp SINE Alu 2 306 -7 301 303 22 9 chr18 37880713 37880839 -48108095 + MIR SINE MIR 16 143 -67 200 286 0 60 chr18 37880805 37880889 -48108045 + L3 LINE CR1 429 507 -1070 * 531 283 54 24 chr18 37881925 37882091 -48106843 + MIR SINE MIR 9 179 -83 264 236 52 29 chr18 37882605 37882779 -48106155 + (TCTA)n Simple_repeat Simple_repeat 2 179 0 229 170 0 64 chr18 37882968 37883015 -48105919 + G-rich Low_complexity Low_complexity 5 48 0 444 272 22 67 chr18 37883304 37883484 -48105450 + MER5B DNA MER1_type 7 178 0 548 258 8 0 chr18 37885621 37885745 -48103189 + MIR SINE MIR 39 163 -99 478 176 5 53 chr18 37886233 37886420 -48102514 + (TG)n Simple_repeat Simple_repeat 2 179 0 251 202 11 0 chr18 37886456 37886545 -48102389 + (TG)n Simple_repeat Simple_repeat 2 91 0 511 191 23 6 chr18 37886581 37886754 -48102180 + (TG)n Simple_repeat Simple_repeat 2 177 0 241 259 83 56 chr18 37887143 37887251 -48101683 - L2 LINE L2 0 3313 3203 * 427 283 54 19 chr18 37887249 37887454 -48101480 - L2 LINE L2 -467 2847 2636 215 309 66 5 chr18 37888563 37888710 -48100224 - MIR SINE MIR -1 261 41 208 276 35 0 chr18 37890350 37890408 -48098526 + L2 LINE L2 3245 3304 -9 278 267 99 89 chr18 37890757 37890948 -48097986 + MIR3 SINE MIR 4 196 -12 394 318 39 0 chr18 37891047 37891176 -48097758 + L2 LINE L2 3136 3269 -3 180 229 42 0 chr18 37893858 37893906 -48095028 - L2 LINE L2 0 3272 3223 1330 223 149 50 chr18 37893917 37894420 -48094514 - MLT1G1 LTR MaLR 0 595 43 307 255 137 0 chr18 37894936 37895038 -48093896 - L2 LINE L2 -275 3038 2923 378 259 0 34 chr18 37895254 37895401 -48093533 + C-rich Low_complexity Low_complexity 5 146 0 286 331 16 40 chr18 37895992 37896116 -48092818 - MIR SINE MIR -91 171 51 198 0 0 0 chr18 37898116 37898138 -48090796 + (T)n Simple_repeat Simple_repeat 1 22 0 1184 174 23 27 chr18 37898293 37898512 -48090422 + MER20 DNA MER1_type 1 218 -1 2064 110 27 13 chr18 37899155 37899456 -48089478 + AluSx SINE Alu 1 305 -7 261 322 107 8 chr18 37901186 37901307 -48087627 - MER5B DNA MER1_type -5 173 41 180 77 0 0 chr18 37901803 37901829 -48087105 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 316 232 16 18 chr18 37902179 37902282 -48086652 + MER91A DNA MER1_type 5 180 -16 2243 96 3 7 chr18 37902656 37902957 -48085977 - AluSq SINE Alu -13 300 1 275 247 11 0 chr18 37905478 37905567 -48083367 + (CA)n Simple_repeat Simple_repeat 1 90 0 238 313 0 42 chr18 37905567 37905663 -48083271 + (CATG)n Simple_repeat Simple_repeat 3 94 0 257 258 11 0 chr18 37905667 37905760 -48083174 + (CA)n Simple_repeat Simple_repeat 2 95 0 272 325 87 8 chr18 37907434 37907560 -48081374 + MIR SINE MIR 15 150 -112 297 312 35 14 chr18 37908978 37909119 -48079815 + MIR3 SINE MIR 63 206 -2 888 234 49 9 chr18 37910494 37910720 -48078214 + MIR SINE MIR 7 241 -21 388 162 200 19 chr18 37911183 37911288 -48077646 - MIR SINE MIR -119 143 20 234 282 8 26 chr18 37911316 37911433 -48077501 + CT-rich Low_complexity Low_complexity 1 115 0 208 321 18 9 chr18 37912018 37912130 -48076804 + C-rich Low_complexity Low_complexity 2 114 0 792 158 146 0 chr18 37912582 37912746 -48076188 - MER53 DNA DNA -1 188 1 2111 126 7 0 chr18 37913823 37914133 -48074801 + AluSx SINE Alu 1 312 0 326 289 116 0 chr18 37914170 37914291 -48074643 + MIR SINE MIR 92 226 -36 6411 82 21 1 chr18 37916202 37917220 -48071714 - L1P LINE L1 -917 5229 4192 240 86 0 0 chr18 37917320 37917355 -48071579 + (A)n Simple_repeat Simple_repeat 1 35 0 1912 136 10 26 chr18 37919379 37919689 -48069245 + AluSx SINE Alu 8 312 0 223 171 0 0 chr18 37920487 37920528 -48068406 + (CAGAGA)n Simple_repeat Simple_repeat 4 44 0 241 282 117 19 chr18 37921867 37921970 -48066964 + L2 LINE L2 3028 3140 -132 496 325 57 9 chr18 37922147 37922312 -48066622 + MIR SINE MIR 28 207 -55 2238 107 0 0 chr18 37922312 37922610 -48066324 + AluSq SINE Alu 1 298 -15 496 325 57 9 chr18 37922610 37922656 -48066278 + MIR SINE MIR 207 249 -13 326 338 7 7 chr18 37923479 37923673 -48065261 + C-rich Low_complexity Low_complexity 1 194 0 2164 89 3 17 chr18 37925243 37925545 -48063389 + AluY SINE Alu 1 298 -13 1432 122 0 0 chr18 37925545 37925742 -48063192 + AluSc SINE Alu 1 197 -112 1602 153 41 27 chr18 37925763 37926057 -48062877 + AluJo SINE Alu 14 311 -1 1962 117 22 0 chr18 37926265 37926570 -48062364 - AluSg SINE Alu 0 311 1 190 282 223 48 chr18 37926572 37926675 -48062259 - L2 LINE L2 -10 3262 3142 2243 111 60 28 chr18 37926900 37927253 -48061681 - THE1B LTR MaLR 0 364 1 6151 90 2 0 chr18 37927253 37928117 -48060817 - THE1B-int LTR MaLR 0 1580 715 274 208 228 20 chr18 37928149 37928250 -48060684 + L2 LINE L2 2933 3054 -259 246 32 0 0 chr18 37929362 37929393 -48059541 + (GGCTG)n Simple_repeat Simple_repeat 1 31 0 2066 119 0 38 chr18 37929682 37930001 -48058933 - AluSx SINE Alu -5 307 1 217 295 0 16 chr18 37930315 37930376 -48058558 + (CA)n Simple_repeat Simple_repeat 2 61 0 283 340 88 20 chr18 37931044 37931191 -48057743 + MIR SINE MIR 26 182 -80 234 324 36 36 chr18 37981675 37981786 -48007148 - L2 LINE L2 0 3313 3203 * 414 305 38 29 chr18 37981784 37981994 -48006940 - L2 LINE L2 -467 2847 2636 210 307 66 12 chr18 37983113 37983261 -48005673 - MIR SINE MIR -1 261 41 191 254 34 17 chr18 37984911 37984970 -48003964 + L2 LINE L2 3245 3304 -9 278 267 99 89 chr18 37985319 37985510 -48003424 + MIR3 SINE MIR 4 196 -12 386 323 39 0 chr18 37985609 37985736 -48003198 + L2 LINE L2 3136 3267 -5 180 238 24 0 chr18 37988438 37988480 -48000454 - L2 LINE L2 0 3272 3230 1289 221 148 57 chr18 37988500 37989006 -47999928 - MLT1G1 LTR MaLR -1 594 43 307 255 137 0 chr18 37989522 37989624 -47999310 - L2 LINE L2 -275 3038 2923 378 259 0 34 chr18 37989841 37989988 -47998946 + C-rich Low_complexity Low_complexity 5 146 0 286 331 16 40 chr18 37990581 37990705 -47998229 - MIR SINE MIR -91 171 51 198 0 0 0 chr18 37992720 37992742 -47996192 + (T)n Simple_repeat Simple_repeat 1 22 0 1184 174 23 27 chr18 37992897 37993116 -47995818 + MER20 DNA MER1_type 1 218 -1 2031 109 26 17 chr18 37993762 37994064 -47994870 + AluSx SINE Alu 1 305 -7 254 317 98 16 chr18 37995802 37995925 -47993009 - MER5B DNA MER1_type -5 173 41 180 77 0 0 chr18 37996423 37996449 -47992485 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 277 230 17 35 chr18 37996799 37996904 -47992030 + MER91 DNA MER1_type 5 180 -16 2173 96 3 13 chr18 37997285 37997588 -47991346 - AluSq SINE Alu -13 300 1 260 247 12 0 chr18 38000130 38000215 -47988719 + (CA)n Simple_repeat Simple_repeat 1 86 0 250 298 0 43 chr18 38000215 38000309 -47988625 + (CATG)n Simple_repeat Simple_repeat 3 92 0 261 245 11 11 chr18 38000316 38000410 -47988524 + (CA)n Simple_repeat Simple_repeat 2 95 0 272 325 87 8 chr18 38002101 38002227 -47986707 + MIR SINE MIR 15 150 -112 283 296 42 28 chr18 38003650 38003792 -47985142 + MIR3 SINE MIR 63 206 -2 855 249 44 18 chr18 38005177 38005406 -47983528 + MIR SINE MIR 7 241 -21 361 160 198 28 chr18 38005871 38005977 -47982957 - MIR SINE MIR -119 143 20 234 282 8 26 chr18 38006005 38006122 -47982812 + CT-rich Low_complexity Low_complexity 1 115 0 208 321 18 9 chr18 38006712 38006824 -47982110 + C-rich Low_complexity Low_complexity 2 114 0 688 155 143 24 chr18 38007278 38007446 -47981488 - MER53 DNA DNA -1 188 1 2076 125 6 3 chr18 38008528 38008839 -47980095 + AluSx SINE Alu 1 312 0 326 289 116 0 chr18 38008876 38008997 -47979937 + MIR SINE MIR 92 226 -36 21 0 0 0 chr18 38010963 38010984 -47977950 + GC_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr18 38011160 38011193 -47977741 + GC_rich Low_complexity Low_complexity 1 33 0 30 27 0 0 chr18 38011343 38011380 -47977554 + GC_rich Low_complexity Low_complexity 1 37 0 183 146 0 0 chr18 38011399 38011440 -47977494 + (C)n Simple_repeat Simple_repeat 1 41 0 235 247 20 48 chr18 38012051 38012197 -47976737 + (TGGG)n Simple_repeat Simple_repeat 2 143 0 22 35 0 0 chr18 38012356 38012385 -47976549 + GC_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr18 38012597 38012620 -47976314 + GC_rich Low_complexity Low_complexity 1 23 0 722 272 161 30 chr18 38013523 38014195 -47974739 - L2 LINE L2 -19 3294 2373 304 253 58 11 chr18 38014509 38014596 -47974338 - L2 LINE L2 -25 3247 3157 237 272 48 58 chr18 38014721 38014824 -47974110 + MIR3 SINE MIR 64 165 -43 595 232 106 40 chr18 38015125 38015323 -47973611 - MIR SINE MIR -11 251 41 186 296 125 11 chr18 38016862 38016950 -47971984 + L2 LINE L2 3187 3284 -29 222 37 0 0 chr18 38017408 38017435 -47971499 + (TCCC)n Simple_repeat Simple_repeat 4 30 0 247 253 11 11 chr18 38018671 38018758 -47970176 + (CA)n Simple_repeat Simple_repeat 1 87 0 494 254 8 16 chr18 38019232 38019358 -47969576 - MIR SINE MIR -99 163 39 422 278 22 67 chr18 38021510 38021690 -47967244 - MER5B DNA MER1_type 0 178 7 228 188 0 62 chr18 38021979 38022027 -47966907 + C-rich Low_complexity Low_complexity 4 48 0 289 230 52 29 chr18 38022216 38022390 -47966544 + (TAGA)n Simple_repeat Simple_repeat 2 179 0 512 293 48 24 chr18 38022908 38023075 -47965859 - MIR SINE MIR -83 179 9 200 286 0 60 chr18 38024120 38024204 -47964730 - L3 LINE CR1 -1070 507 429 * 301 303 22 9 chr18 38024170 38024296 -47964638 - MIR SINE MIR -67 141 16 2208 88 7 16 chr18 38025377 38025685 -47963249 - AluSp SINE Alu -7 306 2 1638 200 80 37 chr18 38026374 38026724 -47962210 + MLT1A1 LTR MaLR 1 365 0 21 36 0 0 chr18 38027319 38027347 -47961587 + AT_rich Low_complexity Low_complexity 1 28 0 1650 235 38 16 chr18 38027643 38028094 -47960840 - MLT1C LTR MaLR -1 466 6 183 204 0 0 chr18 38028432 38028481 -47960453 + (CCAA)n Simple_repeat Simple_repeat 2 50 0 475 341 215 19 chr18 38028687 38029171 -47959763 - L3 LINE CR1 -814 763 185 303 287 9 35 chr18 38030094 38030209 -47958725 - MIR SINE MIR -85 177 66 1305 188 0 124 chr18 38030652 38031008 -47957926 - AluSx SINE Alu 0 312 1 504 203 22 72 chr18 38031027 38031165 -47957769 + MER94 DNA DNA 3 133 -1 937 223 71 40 chr18 38032065 38032361 -47956573 - L1ME2 LINE L1 -10 6154 5850 572 291 203 32 chr18 38032734 38032957 -47955977 + L2 LINE L2 2502 2686 -628 2108 105 16 33 chr18 38032957 38033263 -47955671 + AluSx SINE Alu 1 301 -11 572 291 203 32 chr18 38033263 38033444 -47955490 + L2 LINE L2 2686 2975 -339 199 339 15 0 chr18 38033476 38033541 -47955393 + L2 LINE L2 3207 3272 0 2110 100 0 10 chr18 38034756 38035055 -47953879 - AluSx SINE Alu -16 296 1 636 261 196 11 chr18 38035101 38035469 -47953465 - L2 LINE L2 -7 3306 2871 329 315 68 20 chr18 38040151 38040307 -47948627 + MIR3 SINE MIR 5 169 -58 313 319 26 18 chr18 38043865 38043978 -47944956 + MIR SINE MIR 74 187 -75 2274 71 0 10 chr18 38046115 38046411 -47942523 + AluSg SINE Alu 6 298 -12 2445 64 0 6 chr18 38046436 38046747 -47942187 + AluY SINE Alu 3 311 0 1959 128 6 29 chr18 38048785 38049097 -47939837 + AluSx SINE Alu 8 312 0 223 171 0 0 chr18 38049896 38049937 -47938997 + (CAGAGA)n Simple_repeat Simple_repeat 4 44 0 221 263 40 13 chr18 38051280 38051356 -47937578 + L2 LINE L2 3028 3105 -167 418 321 56 23 chr18 38051562 38051730 -47937204 + MIR SINE MIR 28 206 -56 2144 114 0 16 chr18 38051730 38052036 -47936898 + AluSq SINE Alu 1 301 -12 418 321 56 23 chr18 38052036 38052082 -47936852 + MIR SINE MIR 206 249 -13 326 338 7 7 chr18 38052914 38053108 -47935826 + C-rich Low_complexity Low_complexity 1 194 0 2389 63 3 3 chr18 38054705 38055007 -47933927 + AluY SINE Alu 1 302 -9 185 62 0 31 chr18 38056411 38056443 -47932491 + (AGGGGG)n Simple_repeat Simple_repeat 5 35 0 253 291 58 10 chr18 38057522 38057625 -47931309 - MIR SINE MIR -96 166 59 190 320 90 0 chr18 38058431 38058509 -47930425 - MIR SINE MIR -70 192 108 2128 172 34 16 chr18 38058891 38059269 -47929665 + MLT1B LTR MaLR 4 388 -2 315 326 14 14 chr18 38059471 38059609 -47929325 - MIR SINE MIR -78 184 47 244 196 0 87 chr18 38060849 38060941 -47927993 + GA-rich Low_complexity Low_complexity 3 86 0 193 335 108 28 chr18 38062449 38062661 -47926273 + L2 LINE L2 2827 3055 -217 240 200 0 0 chr18 38062721 38062776 -47926158 + GA-rich Low_complexity Low_complexity 2 56 0 1322 196 3 10 chr18 38063582 38063873 -47925061 - MER45B DNA AcHobo -44 996 708 709 291 137 25 chr18 38063975 38064339 -47924595 - MER45C DNA AcHobo -212 741 337 716 196 20 7 chr18 38064431 38064584 -47924350 - MER45C DNA AcHobo -795 158 4 206 351 0 13 chr18 38067855 38067932 -47921002 + MIR SINE MIR 38 113 -95 345 252 0 0 chr18 38068054 38068157 -47920777 + CT-rich Low_complexity Low_complexity 2 104 0 800 56 0 0 chr18 38068469 38068576 -47920358 + (TCCA)n Simple_repeat Simple_repeat 1 107 0 203 244 128 35 chr18 38068577 38068663 -47920271 - L2 LINE L2 -18 3295 3202 255 58 19 39 chr18 38069739 38069791 -47919143 + (TCCC)n Simple_repeat Simple_repeat 3 53 0 293 211 7 21 chr18 38070194 38070336 -47918598 + (TG)n Simple_repeat Simple_repeat 1 140 0 1285 158 181 15 chr18 38070981 38071240 -47917694 - AluJo SINE Alu 0 302 1 255 357 0 42 chr18 38072783 38072926 -47916008 + (CCA)n Simple_repeat Simple_repeat 1 137 0 526 339 0 17 chr18 38072945 38073122 -47915812 + (CACCAT)n Simple_repeat Simple_repeat 6 179 0 331 417 6 6 chr18 38073069 38073249 -47915685 + (CAT)n Simple_repeat Simple_repeat 1 180 0 * 356 0 23 0 chr18 38073545 38073589 -47915345 + (TG)n Simple_repeat Simple_repeat 1 45 0 2032 147 0 0 chr18 38074260 38074559 -47914375 + AluSx SINE Alu 1 299 -13 203 171 0 0 chr18 38075306 38075341 -47913593 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 349 289 46 40 chr18 38076405 38076578 -47912356 + L3 LINE CR1 1398 1571 -6 309 51 0 0 chr18 38077048 38077087 -47911847 + (CA)n Simple_repeat Simple_repeat 1 39 0 264 277 131 44 chr18 38077465 38077602 -47911332 + MIR SINE MIR 46 194 -68 423 0 0 0 chr18 38078158 38078205 -47910729 + (TG)n Simple_repeat Simple_repeat 2 48 0 273 261 14 0 chr18 38078386 38078455 -47910479 + (TG)n Simple_repeat Simple_repeat 2 71 0 185 286 81 71 chr18 38078641 38078851 -47910083 + L2 LINE L2 2834 3045 -227 183 229 0 0 chr18 38080503 38080538 -47908396 - MER5A DNA MER1_type -150 39 5 207 0 0 0 chr18 38083529 38083552 -47905382 + (CAA)n Simple_repeat Simple_repeat 2 24 0 182 341 61 0 chr18 38084401 38084483 -47904451 - L2 LINE L2 0 3313 3227 251 265 37 85 chr18 38084603 38084792 -47904142 - L2 LINE L2 -252 3020 2841 452 229 90 110 chr18 38085112 38085546 -47903388 + MER110 LTR ERV1 70 479 -12 2061 123 0 19 chr18 38086455 38086765 -47902169 - AluSx SINE Alu 0 312 9 759 131 20 10 chr18 38087232 38087485 -47901449 + AluJo SINE Alu 12 312 0 196 245 0 38 chr18 38087500 38087553 -47901381 - MIR SINE MIR -204 58 8 307 315 51 34 chr18 38188357 38188535 -47800399 + MIR SINE MIR 32 212 -50 754 248 71 18 chr18 38189129 38189355 -47799579 + MIR SINE MIR 7 244 -18 728 247 35 96 chr18 38189582 38189979 -47798955 - MLT1H LTR MaLR 0 549 177 23 0 0 0 chr18 38190152 38190175 -47798759 + AT_rich Low_complexity Low_complexity 1 23 0 496 188 2 12 chr18 38190832 38190942 -47797992 + L1MA9 LINE L1 5828 5936 -242 * 637 101 81 0 chr18 38190933 38191032 -47797902 + L1MA9 LINE L1 6166 6272 -40 360 189 24 30 chr18 38191094 38191258 -47797676 + (TA)n Simple_repeat Simple_repeat 1 163 0 242 137 20 0 chr18 38191263 38191314 -47797620 + L1MA9 LINE L1 6261 6312 0 182 355 24 16 chr18 38191572 38191696 -47797238 - MIR SINE MIR -50 212 88 250 325 96 12 chr18 38192179 38192345 -47796589 + L3 LINE CR1 1246 1425 -152 216 308 0 0 chr18 38192458 38192523 -47796411 - L3 LINE CR1 -240 1337 1273 265 250 25 0 chr18 38193563 38193643 -47795291 + (TCCA)n Simple_repeat Simple_repeat 4 85 0 3199 269 110 41 chr18 38194107 38194654 -47794280 - HAL1 LINE L1 0 2507 1999 192 40 0 0 chr18 38194654 38194679 -47794255 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3199 269 110 41 chr18 38194679 38195950 -47792984 - HAL1 LINE L1 -508 1999 563 1952 120 56 3 chr18 38198130 38198414 -47790520 - AluSq SINE Alu -14 299 1 1614 227 59 42 chr18 38198417 38198892 -47790042 - MLT1D LTR MaLR -2 503 21 327 113 0 0 chr18 38199388 38199441 -47789493 + (TG)n Simple_repeat Simple_repeat 2 54 0 225 211 0 0 chr18 38199830 38199882 -47789052 + (CA)n Simple_repeat Simple_repeat 2 53 0 430 216 168 24 chr18 38200731 38200852 -47788082 + MLT1E LTR MaLR 24 162 -431 325 88 158 0 chr18 38200852 38200909 -47788025 + MLT2A2 LTR ERVL 3 68 -385 1618 68 10 0 chr18 38200909 38201116 -47787818 - MLT2A2 LTR ERVL -244 209 1 1431 203 89 51 chr18 38201170 38201540 -47787394 + MLT1E LTR MaLR 210 593 0 322 274 166 17 chr18 38202333 38202508 -47786426 + HAL1 LINE L1 280 480 -2027 435 324 38 5 chr18 38202720 38202930 -47786004 + L2 LINE L2 2869 3085 -228 2268 161 74 0 chr18 38203030 38203435 -47785499 - L1MB3 LINE L1 0 6183 5749 343 246 11 11 chr18 38206184 38206278 -47782656 + MIR SINE MIR 24 106 -102 252 223 160 11 chr18 38206615 38206709 -47782225 - MIR SINE MIR -30 232 125 317 318 47 10 chr18 38211012 38211196 -47777738 - L2 LINE L2 -252 3020 2837 533 260 82 42 chr18 38211212 38211620 -47777314 - MLT1H LTR MaLR 0 549 83 227 111 0 44 chr18 38211725 38211770 -47777164 + (TTCC)n Simple_repeat Simple_repeat 2 44 0 264 321 27 27 chr18 38211969 38212081 -47776853 - L2 LINE L2 -161 3111 3000 201 147 0 0 chr18 38216029 38216063 -47772871 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 264 100 0 0 chr18 38216099 38216139 -47772795 + (TGAA)n Simple_repeat Simple_repeat 3 42 0 180 125 0 0 chr18 38216966 38216998 -47771936 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 700 294 94 42 chr18 38217458 38218334 -47770600 + L1MCa LINE L1 924 2031 -4576 12790 46 4 1 chr18 38218621 38220947 -47767987 - L1PA5 LINE L1 -3 6151 3820 4266 51 23 7 chr18 38220948 38221512 -47767422 - L1PA5 LINE L1 -2418 3728 3156 2478 294 62 46 chr18 38221484 38222584 -47766350 + L1MCa LINE L1 2047 3128 -3298 * 1973 68 19 15 chr18 38222584 38222850 -47766084 + L1PA13 LINE L1 5897 6163 0 2478 294 62 46 chr18 38222850 38224424 -47764510 + L1MCa LINE L1 3128 4767 -1659 313 228 87 47 chr18 38224506 38224655 -47764279 + L1MCa LINE L1 5110 5264 -1162 29 90 0 0 chr18 38224671 38224749 -47764185 + AT_rich Low_complexity Low_complexity 1 78 0 1698 286 106 26 chr18 38224754 38225826 -47763108 + L1MCa LINE L1 5289 6443 -7 351 326 110 27 chr18 38226395 38226696 -47762238 - LTR16B LTR ERVL -75 389 64 761 113 35 21 chr18 38226696 38226837 -47762097 + MER50 LTR ERV1 499 641 -93 271 0 0 49 chr18 38226839 38226880 -47762054 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 246 23 45 23 chr18 38226949 38226993 -47761941 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 881 35 9 0 chr18 38226993 38227106 -47761828 + (TTCC)n Simple_repeat Simple_repeat 3 116 0 878 85 8 0 chr18 38227207 38227336 -47761598 + (TTCC)n Simple_repeat Simple_repeat 3 132 0 1811 166 16 0 chr18 38227336 38227643 -47761291 - AluSx SINE Alu 0 312 1 228 254 84 0 chr18 38229365 38229436 -47759498 + MIR SINE MIR 61 137 -125 359 313 17 9 chr18 38231275 38231390 -47757544 - MIR SINE MIR -99 163 48 314 269 10 88 chr18 38232402 38232623 -47756311 + GA-rich Low_complexity Low_complexity 1 203 0 218 286 16 0 chr18 38233013 38233076 -47755858 + MIR SINE MIR 81 144 -118 374 279 192 12 chr18 38234420 38234592 -47754342 - MIR SINE MIR -12 250 48 216 0 0 0 chr18 38236660 38236684 -47752250 + (TTTTA)n Simple_repeat Simple_repeat 4 27 0 25 51 0 0 chr18 38236817 38236856 -47752078 + AT_rich Low_complexity Low_complexity 1 39 0 1258 220 53 3 chr18 38238356 38238677 -47750257 - MER33 DNA MER1_type -8 316 1 347 287 7 52 chr18 38239043 38239179 -47749755 + MIR SINE MIR 80 209 -53 200 300 12 12 chr18 38241393 38241473 -47747461 + (AATAG)n Simple_repeat Simple_repeat 4 83 0 253 292 92 31 chr18 38242453 38242583 -47746351 - L2 LINE L2 -17 3296 3159 353 278 202 20 chr18 38242836 38243084 -47745850 + MLT1K LTR MaLR 137 429 -159 4070 166 30 33 chr18 38243552 38244339 -47744595 + LTR1 LTR ERV1 1 785 0 290 311 19 0 chr18 38244587 38244693 -47744241 + MIR3 SINE MIR 86 193 -15 242 300 34 51 chr18 38244907 38245042 -47743892 + MIR SINE MIR 17 145 -63 1425 252 121 22 chr18 38248513 38249052 -47739882 - MLT1G1 LTR MaLR -1 594 3 271 329 39 29 chr18 38249520 38249727 -47739207 - L1MC/D LINE L1 -2000 5808 5600 389 329 48 38 chr18 38249927 38250240 -47738694 - L1MC/D LINE L1 -751 5395 5080 222 91 0 0 chr18 38250300 38250333 -47738601 + (CA)n Simple_repeat Simple_repeat 1 33 0 310 287 87 0 chr18 38250668 38250783 -47738151 - MIR SINE MIR -21 241 117 435 251 12 96 chr18 38252170 38252364 -47736570 + MIR SINE MIR 19 192 -58 546 275 23 0 chr18 38252777 38252908 -47736026 + L2 LINE L2 3136 3269 -3 220 333 38 0 chr18 38252974 38253079 -47735855 - MIR SINE MIR -66 196 88 323 319 57 28 chr18 38253877 38254018 -47734916 + MIR SINE MIR 4 148 -114 614 226 30 98 chr18 38254030 38254373 -47734561 - MLT1H LTR MaLR -2 547 105 2452 260 164 30 chr18 38254718 38254848 -47734086 - L2 LINE L2 -16 3297 3186 2046 122 3 0 chr18 38254848 38255142 -47733792 + AluY SINE Alu 1 295 -16 2452 260 164 30 chr18 38255142 38256338 -47732596 - L2 LINE L2 -127 3186 1798 216 316 58 45 chr18 38256459 38256614 -47732320 + L2 LINE L2 3087 3243 -29 319 301 11 0 chr18 38256898 38256991 -47731943 + L3 LINE CR1 1419 1512 -65 219 346 130 31 chr18 38259453 38259478 -47729456 + L3 LINE CR1 1354 1375 -202 2229 117 0 0 chr18 38259478 38259786 -47729148 - AluSq SINE Alu -5 308 1 219 346 130 31 chr18 38259786 38259922 -47729012 + L3 LINE CR1 1375 1531 -46 424 274 179 32 chr18 38261325 38261766 -47727168 + LTR33 LTR ERVL 9 514 -7 25 0 0 0 chr18 38261851 38261876 -47727058 + AT_rich Low_complexity Low_complexity 1 25 0 6722 124 42 61 chr18 38262371 38263624 -47725310 + Tigger3b DNA MER2_type 1 1230 -1 202 276 244 6 chr18 38263641 38263797 -47725137 - MIR SINE MIR -2 260 68 502 254 91 78 chr18 38265090 38265395 -47723539 - MLT1G LTR MaLR -81 461 193 379 294 0 0 chr18 38265403 38265488 -47723446 - L1MC4 LINE L1 -1339 6703 6619 7555 31 0 5 chr18 38265488 38266438 -47722496 - L1PA6 LINE L1 -4 6150 5201 291 275 33 22 chr18 38266445 38266536 -47722398 - MLT1G1 LTR MaLR -347 248 157 2102 128 0 10 chr18 38266545 38266850 -47722084 - AluSx SINE Alu -10 302 1 278 224 0 95 chr18 38266851 38266997 -47721937 - MLT1H LTR MaLR -379 170 5 230 324 62 35 chr18 38266997 38267142 -47721792 + MIR SINE MIR 82 230 -32 2211 160 5 13 chr18 38267153 38267527 -47721407 - THE1C LTR MaLR -1 374 4 190 283 0 0 chr18 38269609 38269662 -47719272 - L2 LINE L2 0 3313 3261 470 320 87 0 chr18 38269702 38269921 -47719013 - L2 LINE L2 -557 2757 2520 364 295 62 0 chr18 38270276 38270388 -47718546 - MIR3 SINE MIR -49 159 41 354 45 0 0 chr18 38271883 38271927 -47717007 + (TG)n Simple_repeat Simple_repeat 1 44 0 215 160 40 0 chr18 38272660 38272710 -47716224 + GA-rich Low_complexity Low_complexity 5 56 0 390 335 33 39 chr18 38272723 38272905 -47716029 + MIR SINE MIR 20 200 -62 813 301 5 10 chr18 38273881 38274090 -47714844 - MIR SINE MIR -31 231 24 739 218 58 0 chr18 38274090 38274246 -47714688 - FRAM SINE Alu -8 168 4 279 240 70 20 chr18 38275934 38276034 -47712900 - MLT1I LTR MaLR -9 400 296 261 300 100 15 chr18 38276178 38276308 -47712626 - MLT1I LTR MaLR -250 159 19 216 97 0 0 chr18 38276521 38276552 -47712382 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 1096 234 147 43 chr18 38276552 38277218 -47711716 - L2 LINE L2 -13 3300 2561 990 269 77 54 chr18 38278372 38278852 -47710082 + LTR33 LTR ERVL 19 509 -12 402 289 119 28 chr18 38279169 38279387 -47709547 - MIR SINE MIR 0 262 25 280 367 18 11 chr18 38280079 38280252 -47708682 + MIR SINE MIR 2 261 -1 * 516 337 105 27 chr18 38280242 38280717 -47708217 + L2 LINE L2 2417 2928 -386 22 0 0 0 chr18 38281671 38281693 -47707241 + AT_rich Low_complexity Low_complexity 1 22 0 255 61 0 0 chr18 38281879 38281912 -47707022 + (GA)n Simple_repeat Simple_repeat 2 34 0 24 0 0 0 chr18 38281912 38281936 -47706998 + AT_rich Low_complexity Low_complexity 1 24 0 423 0 0 0 chr18 38281962 38282009 -47706925 + (TG)n Simple_repeat Simple_repeat 2 48 0 2010 101 3 26 chr18 38282010 38282316 -47706618 - AluSq SINE Alu -14 299 1 200 114 29 0 chr18 38283028 38283063 -47705871 + (TTTG)n Simple_repeat Simple_repeat 4 39 0 197 333 0 0 chr18 38285558 38285621 -47703313 + L2 LINE L2 3251 3313 0 484 316 44 6 chr18 38286940 38287098 -47701836 - MIR SINE MIR -85 177 14 840 263 94 35 chr18 38287825 38288144 -47700790 + MLT1I LTR MaLR 70 407 -2 466 336 55 21 chr18 38288220 38288455 -47700479 + MIR SINE MIR 20 262 0 1706 132 19 68 chr18 38288467 38288792 -47700142 - AluSx SINE Alu -3 309 1 298 304 22 11 chr18 38289138 38289230 -47699704 - MER5A DNA MER1_type -3 186 94 807 267 65 30 chr18 38289254 38289486 -47699448 + MIR SINE MIR 21 260 -2 444 228 14 174 chr18 38290466 38290742 -47698192 + MIR SINE MIR 31 262 0 23 68 0 0 chr18 38290787 38290831 -47698103 + AT_rich Low_complexity Low_complexity 1 44 0 329 282 16 16 chr18 38291057 38291181 -47697753 - L1MC4a LINE L1 -1923 5885 5762 263 241 69 95 chr18 38291300 38291562 -47697372 - L1MC4a LINE L1 -684 5478 5258 438 327 73 18 chr18 38291609 38291829 -47697105 - L1MC4a LINE L1 -964 5182 4951 357 285 62 7 chr18 38291829 38291973 -47696961 - MIR SINE MIR -30 232 81 196 159 43 87 chr18 38292994 38293063 -47695871 + L2 LINE L2 3169 3234 -79 197 281 94 0 chr18 38295731 38295795 -47693139 - L2 LINE L2 0 3272 3203 232 196 22 0 chr18 38296129 38296175 -47692759 + GA-rich Low_complexity Low_complexity 1 47 0 387 0 0 0 chr18 38296197 38296240 -47692694 + (TG)n Simple_repeat Simple_repeat 2 44 0 305 294 0 0 chr18 38297886 38297954 -47690980 + L2 LINE L2 3199 3266 -6 648 320 40 0 chr18 38298150 38298372 -47690562 - MIR SINE MIR -30 232 2 2166 131 51 11 chr18 38300120 38300493 -47688441 - MLT1B LTR MaLR -2 388 1 691 278 6 6 chr18 38300649 38300811 -47688123 - MER5B DNA MER1_type 0 178 17 238 252 146 29 chr18 38300817 38300920 -47688014 - MIR SINE MIR -78 130 16 586 264 127 25 chr18 38301092 38301289 -47687645 + LTR16A LTR ERVL 232 448 -2 206 346 90 0 chr18 38301319 38301397 -47687537 - L2 LINE L2 -16 3256 3172 2671 199 12 10 chr18 38301758 38302208 -47686726 + MLT2B2 LTR ERVL 3 456 -59 1071 46 13 7 chr18 38302208 38302359 -47686575 + (TCTA)n Simple_repeat Simple_repeat 1 152 0 2671 199 12 10 chr18 38302359 38302420 -47686514 + MLT2B2 LTR ERVL 456 515 0 261 343 37 15 chr18 38304545 38304679 -47684255 + L2 LINE L2 2921 3057 -215 1153 316 86 35 chr18 38304692 38305936 -47682998 + L2 LINE L2 2009 3313 0 22 0 0 0 chr18 38307475 38307497 -47681437 + AT_rich Low_complexity Low_complexity 1 22 0 891 136 68 17 chr18 38307636 38307813 -47681121 + MER53 DNA DNA 4 189 0 532 125 10 21 chr18 38308098 38308194 -47680740 - MER5B DNA MER1_type -15 163 69 1576 12 0 0 chr18 38308208 38308379 -47680555 - AluYa5 SINE Alu -3 308 138 2878 10 0 0 chr18 38308479 38308785 -47680149 - AluYa5 SINE Alu -5 306 1 239 185 0 19 chr18 38308793 38308847 -47680087 - MER5B DNA MER1_type -122 56 4 839 268 136 4 chr18 38309563 38309843 -47679091 - MER46C DNA MER2_type -2 336 20 414 257 16 148 chr18 38309861 38310118 -47678816 - MIR SINE MIR -9 253 31 209 106 0 21 chr18 38311047 38311094 -47677840 + (CAAA)n Simple_repeat Simple_repeat 4 49 0 266 307 142 17 chr18 38311198 38311374 -47677560 - MIR SINE MIR -31 231 34 187 239 0 43 chr18 38311561 38311607 -47677327 + MIR SINE MIR 32 75 -133 190 290 169 34 chr18 38312712 38312919 -47676015 + L2 LINE L2 2127 2361 -953 33 56 0 0 chr18 38313062 38313116 -47675818 + AT_rich Low_complexity Low_complexity 1 54 0 996 238 88 30 chr18 38313121 38313483 -47675451 - L1ME3A LINE L1 -4 6166 5784 25 65 0 0 chr18 38313610 38313656 -47675278 + AT_rich Low_complexity Low_complexity 1 46 0 1521 174 24 44 chr18 38313657 38313951 -47674983 - AluJo SINE Alu -24 288 1 201 39 0 0 chr18 38314611 38314637 -47674297 + (T)n Simple_repeat Simple_repeat 1 26 0 2045 42 0 0 chr18 38314917 38315157 -47673777 + L1PA5 LINE L1 5907 6146 -8 21 36 0 0 chr18 38315157 38315185 -47673749 + AT_rich Low_complexity Low_complexity 1 28 0 306 225 0 12 chr18 38316110 38316190 -47672744 + CT-rich Low_complexity Low_complexity 2 80 0 330 319 155 25 chr18 38316318 38316719 -47672215 - L1ME3A LINE L1 -349 5772 5320 22 0 0 0 chr18 38316803 38316825 -47672109 + AT_rich Low_complexity Low_complexity 1 22 0 238 302 0 0 chr18 38316925 38316989 -47671945 + polypyrimidine Low_complexity Low_complexity 4 106 0 341 310 91 60 chr18 38317012 38317608 -47671326 - L1ME3A LINE L1 -1159 4987 4374 223 167 30 0 chr18 38317916 38317982 -47670952 + (TA)n Simple_repeat Simple_repeat 1 68 0 35 41 0 0 chr18 38317999 38318048 -47670886 + AT_rich Low_complexity Low_complexity 1 49 0 183 42 0 0 chr18 38318191 38318215 -47670719 + (TG)n Simple_repeat Simple_repeat 2 25 0 408 310 66 46 chr18 38318362 38318755 -47670179 - L1ME3A LINE L1 -2671 3475 3075 374 274 129 52 chr18 38320450 38320848 -47668086 + MLT1L LTR MaLR 98 563 -52 1986 158 0 3 chr18 38320848 38321152 -47667782 - AluJb SINE Alu -9 303 1 374 274 129 52 chr18 38321152 38321210 -47667724 + MLT1L LTR MaLR 563 615 0 188 97 32 0 chr18 38321541 38321572 -47667362 - MIR SINE MIR -141 121 90 24 91 0 0 chr18 38321697 38321763 -47667171 + AT_rich Low_complexity Low_complexity 1 66 0 244 253 12 24 chr18 38322236 38322319 -47666615 - L1ME4a LINE L1 -104 6017 5936 311 293 65 69 chr18 38323461 38323693 -47665241 + L2 LINE L2 3078 3308 -5 204 200 107 13 chr18 38323839 38323914 -47665020 - L2 LINE L2 -1589 1725 1644 * 219 374 137 0 chr18 38323876 38324066 -47664868 + L3 LINE CR1 754 969 -608 348 277 183 10 chr18 38324131 38324333 -47664601 - MIR SINE MIR -13 249 13 837 304 58 6 chr18 38324343 38324685 -47664249 + L3 LINE CR1 1040 1399 -178 782 260 78 4 chr18 38325690 38325921 -47663013 - MIR SINE MIR -14 248 1 233 172 35 0 chr18 38326223 38326281 -47662653 + CT-rich Low_complexity Low_complexity 2 61 0 254 363 111 0 chr18 38326295 38326430 -47662504 - L2 LINE L2 -19 3253 3104 662 170 50 14 chr18 38326530 38326671 -47662263 + MER103 DNA DNA 13 158 -8 600 129 24 0 chr18 38326721 38326845 -47662089 + (TCCA)n Simple_repeat Simple_repeat 2 128 0 335 303 89 22 chr18 38326910 38327181 -47661753 - L2 LINE L2 -104 3209 2921 183 286 20 0 chr18 38327286 38327335 -47661599 - L3 LINE CR1 -17 1560 1511 30 27 0 0 chr18 38328037 38328074 -47660860 + AT_rich Low_complexity Low_complexity 1 37 0 266 188 83 0 chr18 38328075 38328123 -47660811 - L1PA8A LINE L1 -3 6128 6077 1617 168 108 15 chr18 38329203 38329537 -47659397 + MLT1A1 LTR MaLR 1 365 0 1453 163 25 8 chr18 38330223 38330463 -47658471 + MSTB LTR MaLR 110 353 -73 1787 177 33 80 chr18 38330752 38330937 -47657997 + MSTB1 LTR MaLR 1 193 -239 2492 146 41 21 chr18 38330937 38331355 -47657579 - MSTB LTR MaLR 0 426 1 1787 177 33 80 chr18 38331355 38331620 -47657314 + MSTB1 LTR MaLR 193 430 -2 221 311 8 66 chr18 38332181 38332303 -47656631 - MER5B DNA MER1_type -61 117 3 733 197 82 111 chr18 38332899 38333350 -47655584 - L1MC5 LINE L1 -35 7926 7489 266 279 44 29 chr18 38334193 38334329 -47654605 + L2 LINE L2 2836 2973 -299 183 338 44 0 chr18 38336175 38336243 -47652691 + MIR SINE MIR 147 217 -45 196 340 66 0 chr18 38337025 38337131 -47651803 + MIR SINE MIR 106 218 -44 1881 177 61 3 chr18 38338478 38338823 -47650111 - MLT1A1 LTR MaLR 0 365 1 3499 214 77 57 chr18 38338828 38340371 -47648563 - MLT1A1-int LTR MaLR -6 1645 1 1848 193 6 12 chr18 38340371 38340708 -47648226 - MLT1A1 LTR MaLR 0 365 31 1911 175 33 84 chr18 38340751 38340880 -47648054 + MER31B LTR ERV1 1 135 -526 2375 99 0 3 chr18 38340880 38341184 -47647750 + AluSc SINE Alu 1 303 -6 1911 175 33 84 chr18 38341184 38341545 -47647389 + MER31B LTR ERV1 135 661 0 275 282 6 123 chr18 38341702 38342035 -47646899 - L2 LINE L2 -567 2747 2454 682 279 49 18 chr18 38342077 38342303 -47646631 - MIR SINE MIR -2 260 28 183 42 0 0 chr18 38342336 38342360 -47646574 + (TG)n Simple_repeat Simple_repeat 1 24 0 201 74 0 0 chr18 38342360 38342387 -47646547 + (GA)n Simple_repeat Simple_repeat 2 28 0 424 229 51 25 chr18 38342674 38342792 -47646142 + MLT2F LTR ERVL 263 383 -280 1413 238 21 36 chr18 38342998 38343495 -47645439 - MLT1-int LTR MaLR -765 606 1 238 213 0 0 chr18 38343497 38343544 -47645390 - MLT2F LTR ERVL -2 661 615 213 196 0 0 chr18 38343546 38343592 -47645342 + (TA)n Simple_repeat Simple_repeat 2 47 0 657 221 185 87 chr18 38343594 38344117 -47644817 - MLT2F LTR ERVL -43 620 3 270 265 176 0 chr18 38344342 38344478 -47644456 + L2 LINE L2 3153 3312 -1 182 356 27 0 chr18 38345007 38345080 -47643854 - L2 LINE L2 -1 3271 3197 * 242 253 60 12 chr18 38345062 38345145 -47643789 + MIR SINE MIR 172 258 -4 386 200 88 24 chr18 38345518 38345643 -47643291 - MLT1J LTR MaLR -378 133 1 244 198 69 9 chr18 38346726 38346842 -47642092 + (TA)n Simple_repeat Simple_repeat 1 123 0 459 282 113 39 chr18 38347832 38348169 -47640765 - L2 LINE L2 0 3313 2952 267 282 73 32 chr18 38348281 38348405 -47640529 + MER94 DNA DNA 3 131 -3 817 291 123 9 chr18 38348408 38348787 -47640147 - L2 LINE L2 -671 2643 2172 264 111 0 0 chr18 38348787 38348832 -47640102 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 817 291 123 9 chr18 38348832 38349036 -47639898 - L2 LINE L2 -1142 2172 1993 2307 89 3 10 chr18 38350237 38350560 -47638374 - AluSq SINE Alu 0 313 1 275 188 80 96 chr18 38351736 38351845 -47637089 - MIR SINE MIR -45 163 57 271 178 153 76 chr18 38351909 38352027 -47636907 + MER5A DNA MER1_type 44 170 -19 248 0 0 30 chr18 38352153 38352186 -47636748 + (CCCCAG)n Simple_repeat Simple_repeat 2 33 0 409 328 74 7 chr18 38352781 38353017 -47635917 - MIR SINE MIR 0 262 12 408 212 47 18 chr18 38353347 38353517 -47635417 + (CA)n Simple_repeat Simple_repeat 1 175 0 228 192 58 29 chr18 38353531 38353635 -47635299 + (CA)n Simple_repeat Simple_repeat 1 107 0 228 163 36 30 chr18 38353649 38353815 -47635119 + (CA)n Simple_repeat Simple_repeat 1 167 0 469 185 41 21 chr18 38353942 38354187 -47634747 + (CA)n Simple_repeat Simple_repeat 1 250 0 332 232 46 13 chr18 38354214 38354365 -47634569 + (CA)n Simple_repeat Simple_repeat 1 156 0 195 129 0 0 chr18 38354420 38354451 -47634483 + (CA)n Simple_repeat Simple_repeat 2 32 0 229 270 31 31 chr18 38354458 38354617 -47634317 + (CATA)n Simple_repeat Simple_repeat 1 159 0 * 332 246 22 44 chr18 38354513 38354696 -47634238 + (CA)n Simple_repeat Simple_repeat 2 180 0 222 281 12 41 chr18 38354745 38354916 -47634018 + (CA)n Simple_repeat Simple_repeat 1 166 0 755 255 136 39 chr18 38354921 38355282 -47633652 - MSTD LTR MaLR 0 396 1 1673 176 20 20 chr18 38355388 38355690 -47633244 + AluJo SINE Alu 7 308 -4 21 36 0 0 chr18 38355761 38355789 -47633145 + AT_rich Low_complexity Low_complexity 1 28 0 228 235 0 0 chr18 38355898 38355949 -47632985 - MIR SINE MIR -180 82 32 207 0 0 0 chr18 38357199 38357222 -47631712 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 186 43 0 0 chr18 38357313 38357336 -47631598 + (AATAG)n Simple_repeat Simple_repeat 4 26 0 1475 255 86 19 chr18 38357720 38358413 -47630521 - L1MCc LINE L1 -4455 2667 2022 198 103 0 0 chr18 38358413 38358442 -47630492 + (CTA)n Simple_repeat Simple_repeat 1 29 0 1475 255 86 19 chr18 38358442 38359102 -47629832 - L1MCc LINE L1 -5100 2022 994 27 49 0 0 chr18 38359105 38359146 -47629788 + AT_rich Low_complexity Low_complexity 1 41 0 5880 92 37 8 chr18 38359320 38360000 -47628934 - L1PA11 LINE L1 0 6174 5459 207 0 0 0 chr18 38360000 38360023 -47628911 + (TTG)n Simple_repeat Simple_repeat 1 23 0 5880 92 37 8 chr18 38360023 38360330 -47628604 - L1PA11 LINE L1 -715 5459 5163 536 311 218 35 chr18 38360343 38361164 -47627770 - L1MCc LINE L1 -5423 1000 30 1447 251 58 0 chr18 38361175 38361610 -47627324 + L1ME3A LINE L1 5703 6162 -8 417 211 117 47 chr18 38362440 38362568 -47626366 - L1MA10 LINE L1 -39 6295 6159 1878 126 52 4 chr18 38362750 38363021 -47625913 + AluSx SINE Alu 1 284 -28 1623 234 108 7 chr18 38363398 38363816 -47625118 + LTR40b LTR ERVL 1 460 -2 243 322 140 37 chr18 38363941 38364320 -47624614 - L2 LINE L2 -410 2904 2487 22 35 0 0 chr18 38366645 38366674 -47622260 + AT_rich Low_complexity Low_complexity 1 29 0 366 231 19 19 chr18 38366768 38366872 -47622062 + L1ME1 LINE L1 6060 6163 -3 28 29 0 0 chr18 38367245 38367280 -47621654 + AT_rich Low_complexity Low_complexity 1 35 0 370 238 25 33 chr18 38367844 38367966 -47620968 + MIR SINE MIR 141 261 -1 1701 158 87 12 chr18 38368916 38369239 -47619695 + MER7A DNA MER2_type 2 346 0 598 279 116 47 chr18 38369329 38369673 -47619261 - MLT1K LTR MaLR -180 408 41 227 206 0 147 chr18 38370130 38370232 -47618702 + MIR3 SINE MIR 113 199 -9 225 299 59 64 chr18 38370547 38370734 -47618200 - MIR SINE MIR -14 248 63 1147 187 40 124 chr18 38371996 38372392 -47616542 + MLT1A1 LTR MaLR 1 363 -2 188 244 49 61 chr18 38372446 38372528 -47616406 + MER5B DNA MER1_type 92 172 -6 25302 133 10 26 chr18 38372555 38372961 -47615973 - L1PA8 LINE L1 0 6487 6076 185 0 40 0 chr18 38372961 38372986 -47615948 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2170 115 0 0 chr18 38372986 38373273 -47615661 - AluSx SINE Alu -25 287 1 25302 133 10 26 chr18 38373273 38377246 -47611688 - L1PA8 LINE L1 -410 6077 2184 2186 116 3 10 chr18 38377246 38377548 -47611386 + AluSx SINE Alu 1 300 -12 25302 133 10 26 chr18 38377548 38379697 -47609237 - L1PA8 LINE L1 -4303 2184 3 4139 164 28 4 chr18 38379717 38380508 -47608426 - L1MB3 LINE L1 -2 6181 5372 348 301 62 9 chr18 38380541 38380654 -47608280 + MER5B DNA MER1_type 1 119 -59 2424 227 56 87 chr18 38380767 38380882 -47608052 + MER21B LTR ERV1 1 118 -745 2287 118 125 8 chr18 38380882 38381265 -47607669 + MSTA LTR MaLR 1 428 0 2424 227 56 87 chr18 38381265 38381970 -47606964 + MER21B LTR ERV1 118 796 -67 236 204 61 0 chr18 38382220 38382269 -47606665 + MER5B DNA MER1_type 1 52 -126 517 214 50 50 chr18 38383262 38383421 -47605513 + MER63A DNA MER1_type 51 209 -1 299 270 115 52 chr18 38383654 38383828 -47605106 + MIR3 SINE MIR 20 204 -4 186 111 0 0 chr18 38384304 38384331 -47604603 - L2 LINE L2 -19 3294 3268 184 302 58 12 chr18 38385055 38385141 -47603793 + MIR SINE MIR 112 201 -61 2643 102 6 0 chr18 38385378 38385740 -47603194 + THE1B LTR MaLR 1 364 0 357 328 107 8 chr18 38385904 38386026 -47602908 + L2 LINE L2 3136 3269 -3 184 247 12 111 chr18 38386164 38386245 -47602689 - L2 LINE L2 -27 3286 3214 2895 168 22 36 chr18 38386288 38386805 -47602129 + MLT2B3 LTR ERVL 1 511 -43 519 60 0 0 chr18 38386805 38386872 -47602062 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 2895 168 22 36 chr18 38386872 38386909 -47602025 + MLT2B3 LTR ERVL 511 547 -7 4008 269 92 19 chr18 38386917 38387465 -47601469 - L2 LINE L2 -188 3125 2618 2314 93 7 0 chr18 38387465 38387767 -47601167 - AluSp SINE Alu -8 305 2 4008 269 92 19 chr18 38387767 38388682 -47600252 - L2 LINE L2 -695 2618 1552 588 240 67 46 chr18 38388683 38388981 -47599953 + L1ME3 LINE L1 1906 2213 -4183 1960 118 4 4 chr18 38388981 38389252 -47599682 + AluSg SINE Alu 34 304 -6 588 240 67 46 chr18 38389252 38389299 -47599635 + L1ME3 LINE L1 2213 2258 -4138 2562 242 83 42 chr18 38389325 38390650 -47598284 + L1ME3 LINE L1 2200 3579 -2636 * 5561 161 25 8 chr18 38390648 38391780 -47597154 + L1MC1 LINE L1 5184 6333 0 1164 260 60 13 chr18 38391799 38392253 -47596681 + L1ME3 LINE L1 3564 4038 -2177 41225 32 21 2 chr18 38392769 38398790 -47590144 + L1HS LINE L1 1 6141 -14 555 297 113 27 chr18 38399010 38399612 -47589322 + L1ME3 LINE L1 4546 5199 -1016 7595 27 1 2 chr18 38399639 38401187 -47587747 - L1PA4 LINE L1 -3 6152 4602 326 48 0 0 chr18 38401187 38401229 -47587705 - L1PA4 LINE L1 -95 6060 6019 804 40 0 0 chr18 38401229 38401324 -47587610 + L1PA4 LINE L1 6053 6152 -3 30088 49 7 4 chr18 38401334 38405975 -47582959 - L1PA4 LINE L1 -1527 4619 1 545 315 52 42 chr18 38406086 38406649 -47582285 + L1ME3 LINE L1 5326 5898 -333 400 78 0 0 chr18 38407332 38407383 -47581551 - MER1B DNA MER1_type -7 322 272 * 1023 179 0 6 chr18 38407381 38407549 -47581385 - MER1B DNA MER1_type -128 169 3 338 182 15 0 chr18 38407869 38407935 -47580999 - MLT1K LTR MaLR 0 588 522 434 244 140 52 chr18 38408282 38408475 -47580459 + MIR SINE MIR 46 255 -7 4478 137 54 0 chr18 38409117 38409798 -47579136 + MER72 LTR ERV1 5 722 0 306 234 122 37 chr18 38409859 38409966 -47578968 - MIR SINE MIR -65 197 82 2251 118 0 0 chr18 38410210 38410515 -47578419 + AluSc SINE Alu 1 305 -4 2271 129 103 0 chr18 38410688 38411076 -47577858 - LTR23 LTR ERV1 -9 428 1 207 381 76 0 chr18 38412592 38412710 -47576224 - L3 LINE CR1 -3 1574 1448 1565 206 113 13 chr18 38412721 38413172 -47575762 - LTR54B LTR ERV1 -2 496 1 660 291 86 95 chr18 38413173 38413755 -47575179 - L3 LINE CR1 -136 1441 855 225 24 71 0 chr18 38413755 38413797 -47575137 + T-rich Low_complexity Low_complexity 2 46 0 2079 108 7 0 chr18 38413799 38414076 -47574858 - AluSg SINE Alu -31 279 1 660 291 86 95 chr18 38414076 38414156 -47574778 - L3 LINE CR1 -723 854 782 207 0 0 0 chr18 38414324 38414347 -47574587 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 243 266 153 24 chr18 38414398 38414522 -47574412 - L3 LINE CR1 -1013 564 425 5101 17 11 0 chr18 38414522 38415356 -47573578 - L1PA3 LINE L1 -526 5629 4788 4258 49 4 6 chr18 38415356 38415903 -47573031 + L1PA3 LINE L1 5641 6155 0 562 218 13 0 chr18 38416630 38416786 -47572148 + (TA)n Simple_repeat Simple_repeat 1 158 0 188 281 132 50 chr18 38417127 38417248 -47571686 - MIR3 SINE MIR -75 133 3 559 261 27 37 chr18 38417871 38418059 -47570875 + MIR SINE MIR 4 189 -73 2330 157 51 7 chr18 38418069 38418484 -47570450 + MER4D LTR ERV1 1 433 -470 1075 131 0 0 chr18 38418484 38418637 -47570297 - FRAM SINE Alu -15 161 9 2708 142 14 50 chr18 38418637 38419034 -47569900 + MER4D LTR ERV1 422 799 -104 2006 131 7 7 chr18 38419034 38419324 -47569610 - AluSx SINE Alu -20 292 3 2708 142 14 50 chr18 38419324 38419426 -47569508 + MER4D LTR ERV1 799 903 0 1795 88 13 4 chr18 38419671 38419910 -47569024 - AluSg1 SINE Alu -23 286 46 1844 208 36 18 chr18 38421324 38421713 -47567221 - MSTD LTR MaLR 0 396 1 2079 103 0 0 chr18 38421858 38422129 -47566805 - AluSc SINE Alu -20 289 19 204 40 0 0 chr18 38422178 38422203 -47566731 + (A)n Simple_repeat Simple_repeat 1 25 0 29 0 0 0 chr18 38425024 38425053 -47563881 + AT_rich Low_complexity Low_complexity 1 29 0 199 276 88 65 chr18 38425120 38425290 -47563644 + L3 LINE CR1 1388 1561 -16 314 277 8 25 chr18 38427225 38427344 -47561590 + (CATA)n Simple_repeat Simple_repeat 2 118 0 15295 159 19 38 chr18 38428112 38430716 -47558218 - L1MA2 LINE L1 0 7723 5250 1266 29 12 17 chr18 38430716 38430888 -47558046 + (TTTC)n Simple_repeat Simple_repeat 1 171 0 15295 159 19 38 chr18 38430888 38432995 -47555939 - L1MA2 LINE L1 -2473 5250 3105 357 348 56 6 chr18 38433588 38433749 -47555185 - MIR SINE MIR -44 218 50 1314 312 23 13 chr18 38533943 38534655 -47454279 - HERVL LTR ERVL -2587 3067 2345 414 285 77 43 chr18 38534721 38534928 -47454006 - LTR50 LTR ERVL -581 214 1 8991 110 23 18 chr18 38535415 38537541 -47451393 - L1PA10 LINE L1 -131 6037 3905 776 312 109 24 chr18 38537529 38538314 -47450620 - L1MCa LINE L1 -4661 1946 910 * 306 67 0 0 chr18 38538434 38538479 -47450455 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 998 105 11 32 chr18 38538490 38538756 -47450178 + AluSx SINE Alu 1 311 -1 304 296 58 34 chr18 38539798 38540004 -47448930 - L1M4 LINE L1 -3378 2768 2558 2897 246 69 30 chr18 38540578 38540732 -47448202 + L1ME1 LINE L1 4973 5120 -1046 393 22 0 0 chr18 38540732 38540778 -47448156 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 2897 246 69 30 chr18 38540778 38541773 -47447161 + L1ME1 LINE L1 5120 6161 -5 366 23 0 0 chr18 38542692 38542735 -47446199 + (TG)n Simple_repeat Simple_repeat 1 43 0 347 238 95 0 chr18 38542855 38542939 -47445995 - MER46C DNA MER2_type -5 333 242 245 216 0 0 chr18 38543007 38543058 -47445876 - MER46C DNA MER2_type -209 129 79 234 224 93 28 chr18 38543303 38543410 -47445524 - L1MB7 LINE L1 -11 6173 6060 268 240 120 48 chr18 38543511 38543636 -47445298 + L1MC4 LINE L1 6569 6702 -1340 2244 176 188 135 chr18 38543697 38544334 -47444600 + L1MD3 LINE L1 6619 7221 -774 502 224 0 9 chr18 38544334 38544450 -47444484 + MLT1F1 LTR MaLR 4 118 -449 2244 176 188 135 chr18 38544450 38544974 -47443960 + L1MD3 LINE L1 7221 7956 -39 649 291 137 24 chr18 38545042 38545528 -47443406 - L1MCa LINE L1 -2610 3816 3386 1595 209 33 18 chr18 38545528 38545863 -47443071 - MER2 DNA MER2_type -3 341 2 649 291 137 24 chr18 38545863 38546250 -47442684 - L1MCa LINE L1 -3040 3386 2844 29 70 0 0 chr18 38546537 38546594 -47442340 + AT_rich Low_complexity Low_complexity 1 57 0 834 246 23 4 chr18 38546717 38546973 -47441961 + L1M4 LINE L1 2791 3051 -3095 * 4918 271 53 33 chr18 38546972 38549100 -47439834 + L1MEc LINE L1 132 2301 -4095 3050 252 129 28 chr18 38549099 38550541 -47438393 + L1MEc LINE L1 2626 4213 -2002 * 1635 263 76 19 chr18 38550664 38551246 -47437688 - L1ME1 LINE L1 -32 6134 5520 2119 186 49 63 chr18 38551270 38551797 -47437137 + MLT2B1 LTR ERVL 1 520 0 453 288 14 0 chr18 38551798 38551944 -47436990 + HERVL-B1 LTR ERVL 2 149 -5505 10661 226 36 11 chr18 38551998 38554223 -47434711 + HERVL-B1 LTR ERVL 258 2538 -3226 234 0 0 0 chr18 38554258 38554284 -47434650 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 260 200 67 0 chr18 38554284 38554344 -47434590 + L1MC2 LINE L1 6035 6098 -246 195 167 0 0 chr18 38554465 38554507 -47434427 + (TA)n Simple_repeat Simple_repeat 2 43 0 231 160 0 20 chr18 38554529 38554579 -47434355 - L1MCa LINE L1 -4362 2064 2016 235 191 26 17 chr18 38554607 38554722 -47434212 + (TA)n Simple_repeat Simple_repeat 2 117 0 287 146 36 0 chr18 38554730 38554785 -47434149 - L1MC2 LINE L1 -257 6087 6031 215 307 13 0 chr18 38556332 38556407 -47432527 + A-rich Low_complexity Low_complexity 5 80 0 342 0 0 0 chr18 38557534 38557572 -47431362 + (TG)n Simple_repeat Simple_repeat 1 38 0 1311 264 38 58 chr18 38558028 38558479 -47430455 - MER74C LTR ERVL 0 460 19 562 226 32 26 chr18 38558503 38558658 -47430276 + L2 LINE L2 2256 2411 -903 425 353 29 34 chr18 38559380 38559584 -47429350 - MIR3 SINE MIR -3 205 3 409 343 25 40 chr18 38560310 38560587 -47428347 + L3b LINE CR1 1225 1497 -86 851 308 54 69 chr18 38560671 38561497 -47427437 - L2 LINE L2 -40 3273 2449 869 270 87 54 chr18 38561586 38562311 -47426623 + L1M4 LINE L1 2491 3252 -2894 3215 31 3 0 chr18 38562311 38562695 -47426239 + L1PA5 LINE L1 5770 6154 0 869 270 87 54 chr18 38562695 38562855 -47426079 + L1M4 LINE L1 3252 3405 -2741 345 197 0 0 chr18 38562927 38562998 -47425936 + (CA)n Simple_repeat Simple_repeat 2 72 0 354 274 118 0 chr18 38562998 38563151 -47425783 + L1M4 LINE L1 3519 3689 -2457 10477 161 26 35 chr18 38563160 38563230 -47425704 - L1P LINE L1 -1668 4478 4409 198 0 0 0 chr18 38563230 38563252 -47425682 + (TG)n Simple_repeat Simple_repeat 1 22 0 10477 161 26 35 chr18 38563252 38564847 -47424087 - L1P LINE L1 -1737 4409 2832 2244 109 7 0 chr18 38564847 38565150 -47423784 - AluY SINE Alu -2 309 5 10477 161 26 35 chr18 38565150 38565551 -47423383 - L1P LINE L1 -3314 2832 2429 2279 256 110 57 chr18 38565531 38565666 -47423268 + L1M4 LINE L1 3695 3821 -2325 * 1995 164 95 63 chr18 38565666 38565894 -47423040 - LTR54 LTR ERV1 0 510 291 2533 69 0 0 chr18 38565894 38566199 -47422735 + AluY SINE Alu 6 310 -1 1995 164 95 63 chr18 38566199 38566464 -47422470 - LTR54 LTR ERV1 -219 291 1 2279 256 110 57 chr18 38566464 38567800 -47421134 + L1M4 LINE L1 3821 5244 -902 428 342 107 8 chr18 38567805 38568068 -47420866 - L2 LINE L2 -1027 2287 1999 372 43 0 0 chr18 38570247 38570293 -47418641 + (TC)n Simple_repeat Simple_repeat 1 46 0 252 0 0 0 chr18 38570292 38570320 -47418614 + (CA)n Simple_repeat Simple_repeat 1 28 0 * 909 225 24 5 chr18 38570731 38570940 -47417994 + MER115 DNA AcHobo 480 692 -1 1386 289 166 34 chr18 38571007 38572525 -47416409 + L1ME LINE L1 39 1756 -4640 258 227 135 7 chr18 38572574 38572715 -47416219 + L1ME LINE L1 1853 2011 -4385 21 57 0 0 chr18 38572719 38572754 -47416180 + AT_rich Low_complexity Low_complexity 1 35 0 834 261 55 0 chr18 38572762 38572961 -47415973 - MER58A DNA MER1_type -3 221 12 1363 255 68 17 chr18 38573035 38573879 -47415055 + L1ME LINE L1 2158 3058 -3157 1626 289 84 37 chr18 38573884 38575138 -47413796 + L1ME LINE L1 3070 4383 -1832 809 235 9 100 chr18 38575150 38575490 -47413444 + L1ME LINE L1 4580 4888 -1327 1660 237 83 51 chr18 38575537 38576306 -47412628 + L1M4 LINE L1 2517 3310 -2836 261 268 37 12 chr18 38576314 38576396 -47412538 + L1ME LINE L1 5817 5900 -331 25 0 0 0 chr18 38577384 38577409 -47411525 + AT_rich Low_complexity Low_complexity 1 25 0 218 375 29 44 chr18 38579688 38579824 -47409110 + MIR SINE MIR 6 140 -68 324 293 121 13 chr18 38580044 38580201 -47408733 - MIR SINE MIR -24 238 65 1462 213 70 35 chr18 38583163 38583610 -47405324 - MLT2B1 LTR ERVL -2 462 1 260 290 97 93 chr18 38584464 38584764 -47404170 + MLT1K LTR MaLR 126 426 -162 349 241 11 11 chr18 38584957 38585044 -47403890 + L2 LINE L2 3218 3304 -9 225 324 35 41 chr18 38585056 38585201 -47403733 + MLT1K LTR MaLR 443 586 -2 2084 127 0 0 chr18 38585368 38585679 -47403255 - AluSq SINE Alu 0 311 1 2707 10 0 0 chr18 38586270 38586564 -47402370 + AluY SINE Alu 1 294 -17 275 327 18 26 chr18 38587486 38587599 -47401335 + MIR SINE MIR 89 200 -62 573 55 0 0 chr18 38587797 38587870 -47401064 + (TTCC)n Simple_repeat Simple_repeat 4 76 0 24 32 0 0 chr18 38587998 38588029 -47400905 + AT_rich Low_complexity Low_complexity 1 31 0 245 295 32 32 chr18 38588559 38588654 -47400280 - L3 LINE CR1 -178 1399 1305 234 241 0 0 chr18 38590222 38590276 -47398658 - L1MA10 LINE L1 -2 6332 6279 318 231 0 48 chr18 38590376 38590480 -47398454 - L1MA10 LINE L1 -94 6240 6142 1810 103 12 0 chr18 38590484 38590727 -47398207 + AluY SINE Alu 65 310 -1 333 280 92 69 chr18 38590734 38590952 -47397982 - MIR SINE MIR -37 225 3 308 317 54 54 chr18 38592570 38592775 -47396159 + HAL1 LINE L1 99 303 -2204 386 296 64 50 chr18 38593045 38593403 -47395531 + HAL1 LINE L1 589 951 -1556 501 17 0 0 chr18 38593467 38593525 -47395409 + (GA)n Simple_repeat Simple_repeat 1 58 0 299 259 103 26 chr18 38593722 38593838 -47395096 + HAL1 LINE L1 2381 2505 -2 25 0 0 0 chr18 38593839 38593864 -47395070 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr18 38594917 38594940 -47393994 + AT_rich Low_complexity Low_complexity 1 23 0 228 282 146 36 chr18 38595703 38595813 -47393121 - L2 LINE L2 -49 3223 3102 282 255 177 11 chr18 38596652 38596834 -47392100 - MIR SINE MIR -34 228 8 235 208 0 0 chr18 38597836 38597884 -47391050 + MER103 DNA DNA 3 50 -116 1526 177 56 7 chr18 38600545 38600904 -47388030 + AluSx SINE Alu 11 383 0 598 276 24 47 chr18 38601062 38601232 -47387702 + MER58A DNA MER1_type 2 167 0 217 296 76 23 chr18 38601312 38601444 -47387490 - MIR SINE MIR -27 235 97 300 341 63 8 chr18 38601842 38601968 -47386966 + MIR SINE MIR 84 216 -46 302 270 90 80 chr18 38605359 38605559 -47383375 + MLT1L LTR MaLR 193 394 -221 200 325 44 61 chr18 38606725 38606839 -47382095 + L2 LINE L2 2634 2745 -569 1071 204 36 103 chr18 38606991 38607408 -47381526 - LTR52 LTR ERVL -3 418 30 537 261 17 23 chr18 38607734 38607910 -47381024 + MER69A DNA AcHobo 3 177 0 188 338 106 35 chr18 38608098 38608240 -47380694 - L2 LINE L2 -227 3045 2894 194 398 17 25 chr18 38608630 38608748 -47380186 + MIR3 SINE MIR 5 121 -87 313 313 60 18 chr18 38608801 38608967 -47379967 - MIR SINE MIR 0 262 90 2072 140 3 0 chr18 38610101 38610401 -47378533 - AluSx SINE Alu -11 301 1 603 323 161 16 chr18 38613573 38614003 -47374931 + LTR33 LTR ERVL 28 519 -2 555 316 105 21 chr18 38615164 38615642 -47373292 - LTR33 LTR ERVL -3 518 1 328 222 125 56 chr18 38615781 38615925 -47373009 + L1M4 LINE L1 2865 3018 -3128 23 0 0 0 chr18 38616053 38616076 -47372858 + AT_rich Low_complexity Low_complexity 1 23 0 1815 150 0 4 chr18 38616076 38616349 -47372585 - AluSx SINE Alu -21 291 20 523 328 78 55 chr18 38616397 38617175 -47371759 + L1M4 LINE L1 4337 5132 -1014 2766 301 76 24 chr18 38617177 38618502 -47370432 + L1ME2 LINE L1 3764 5018 -1146 3438 25 44 7 chr18 38618502 38618934 -47370000 - L1PA4 LINE L1 0 6155 5708 2766 301 76 24 chr18 38618934 38619140 -47369794 + L1ME2 LINE L1 5018 5212 -952 2429 98 23 3 chr18 38619140 38619488 -47369446 + THE1A LTR MaLR 1 355 0 2766 301 76 24 chr18 38619488 38619691 -47369243 + L1ME2 LINE L1 5212 5597 -567 21 57 0 0 chr18 38619720 38619755 -47369179 + AT_rich Low_complexity Low_complexity 1 35 0 3084 147 43 34 chr18 38619821 38620475 -47368459 - L1MA8 LINE L1 -20 6271 5612 2082 165 83 1 chr18 38620469 38621141 -47367793 + L1MA8 LINE L1 4911 5618 -673 * 978 233 73 36 chr18 38621138 38621556 -47367378 + L1ME2 LINE L1 5716 6333 -1 * 327 305 30 48 chr18 38621709 38622040 -47366894 + L1M4 LINE L1 5258 5582 -580 246 299 108 19 chr18 38622875 38623032 -47365902 - HAL1 LINE L1 -110 2397 2227 259 243 56 35 chr18 38624240 38624384 -47364550 - L1M4 LINE L1 -1444 4702 4556 22 0 0 0 chr18 38624384 38624406 -47364528 + AT_rich Low_complexity Low_complexity 1 22 0 633 192 102 34 chr18 38624543 38624720 -47364214 + MER5A DNA MER1_type 1 189 0 275 371 100 6 chr18 38624733 38624903 -47364031 + MIR SINE MIR 76 261 -1 1191 226 48 32 chr18 38625796 38626167 -47362767 + MLT1B LTR MaLR 14 390 0 228 160 0 20 chr18 38626574 38626624 -47362310 - L1MC/D LINE L1 -400 5842 5794 * 320 238 0 0 chr18 38626620 38626700 -47362234 + L1MC/D LINE L1 5741 5820 -358 202 227 15 45 chr18 38627779 38627845 -47361089 + MIR SINE MIR 185 248 -14 1865 175 24 73 chr18 38628750 38629254 -47359680 + LTR9 LTR ERV1 1 479 -133 2211 112 27 0 chr18 38629254 38629548 -47359386 - AluSp SINE Alu -11 302 1 4289 108 48 77 chr18 38629881 38630689 -47358245 - LTR1 LTR ERV1 0 785 1 24 0 0 0 chr18 38632227 38632251 -47356683 + AT_rich Low_complexity Low_complexity 1 24 0 180 313 92 53 chr18 38632296 38632427 -47356507 - L2 LINE L2 -203 3069 2934 1090 202 106 32 chr18 38632561 38633000 -47355934 + MLT2B1 LTR ERVL 1 520 0 597 253 28 6 chr18 38633010 38633192 -47355742 - MLT1B LTR MaLR 0 374 189 258 95 0 0 chr18 38633243 38633285 -47355649 + (GA)n Simple_repeat Simple_repeat 2 43 0 634 205 68 6 chr18 38633304 38633465 -47355469 - MLT1B LTR MaLR -219 171 1 213 344 37 48 chr18 38633467 38633656 -47355278 - L2 LINE L2 -454 2860 2674 37 39 0 0 chr18 38634174 38634225 -47354709 + AT_rich Low_complexity Low_complexity 1 51 0 2415 66 0 10 chr18 38634428 38634729 -47354205 - AluY SINE Alu -13 298 1 952 210 16 0 chr18 38635444 38635630 -47353304 + MER5A DNA MER1_type 1 189 0 195 42 0 0 chr18 38636041 38636065 -47352869 + (GGAA)n Simple_repeat Simple_repeat 3 26 0 2245 108 3 0 chr18 38636558 38636863 -47352071 + AluSq SINE Alu 3 308 -5 206 158 0 26 chr18 38638036 38638074 -47350860 + T-rich Low_complexity Low_complexity 2 38 0 1854 133 25 32 chr18 38640540 38640855 -47348079 - AluSq SINE Alu 0 313 1 880 224 47 4 chr18 38640976 38641253 -47347681 + L1M4 LINE L1 4317 4605 -1541 296 289 65 7 chr18 38642310 38642444 -47346490 + MER5A DNA MER1_type 17 163 -16 2306 109 0 0 chr18 38643467 38643778 -47345156 + AluSx SINE Alu 1 311 -1 435 83 0 0 chr18 38643783 38643843 -47345091 + (GGAA)n Simple_repeat Simple_repeat 4 63 0 376 287 74 0 chr18 38643843 38643965 -47344969 + MIR SINE MIR 19 149 -59 270 0 0 0 chr18 38645094 38645124 -47343810 + (TG)n Simple_repeat Simple_repeat 1 30 0 338 260 131 97 chr18 38645506 38646103 -47342831 - L1ME3A LINE L1 -295 5875 5259 548 277 98 46 chr18 38646472 38646797 -47342137 - L1ME3A LINE L1 -1315 4831 4490 290 283 53 58 chr18 38647015 38647083 -47341851 - L1ME3A LINE L1 -1701 4445 4378 2288 90 0 3 chr18 38647083 38647382 -47341552 - AluY SINE Alu -13 298 1 290 283 53 58 chr18 38647382 38647709 -47341225 - L1ME3A LINE L1 -1768 4378 4052 210 91 0 0 chr18 38647742 38647775 -47341159 + (TG)n Simple_repeat Simple_repeat 1 33 0 267 236 18 0 chr18 38648375 38648430 -47340504 - L3 LINE CR1 -19 1558 1503 260 100 25 0 chr18 38649190 38649230 -47339704 - L1MC/D LINE L1 -651 5591 5551 397 253 23 27 chr18 38649241 38649400 -47339534 + L1MD2 LINE L1 6010 6147 -218 598 261 60 48 chr18 38651376 38651625 -47337309 + MIR SINE MIR 11 262 0 291 282 68 53 chr18 38653831 38654043 -47334891 + MIR SINE MIR 35 246 -16 497 228 79 48 chr18 38656133 38656322 -47332612 + MIR3 SINE MIR 3 197 -11 2561 58 0 6 chr18 38656594 38656906 -47332028 + AluY SINE Alu 1 310 -1 679 227 0 7 chr18 38660124 38660265 -47328669 - MER20 DNA MER1_type 0 219 80 801 226 14 63 chr18 38660462 38660494 -47328440 - MIR SINE MIR -42 220 188 2327 102 0 3 chr18 38660494 38660798 -47328136 - AluY SINE Alu -8 303 1 801 226 14 63 chr18 38660798 38660986 -47327948 - MIR SINE MIR -74 188 11 22 56 0 0 chr18 38661669 38661705 -47327229 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr18 38662600 38662628 -47326306 + AT_rich Low_complexity Low_complexity 1 28 0 2698 42 0 0 chr18 38662806 38663117 -47325817 + AluY SINE Alu 1 311 0 1965 139 0 36 chr18 38664765 38665058 -47323876 + AluSx SINE Alu 2 285 -27 243 61 0 0 chr18 38665058 38665091 -47323843 + (CATA)n Simple_repeat Simple_repeat 4 36 0 189 264 57 0 chr18 38666021 38666074 -47322860 + L2 LINE L2 3253 3308 -5 3126 79 44 9 chr18 38667955 38667995 -47320939 - MLT2A1 LTR ERVL 0 444 407 435 106 0 0 chr18 38667995 38668061 -47320873 + (TA)n Simple_repeat Simple_repeat 2 67 0 3126 79 44 9 chr18 38668061 38668449 -47320485 - MLT2A1 LTR ERVL -37 407 1 21 0 0 0 chr18 38668661 38668682 -47320252 + AT_rich Low_complexity Low_complexity 1 21 0 257 247 43 0 chr18 38669355 38669448 -47319486 + (TA)n Simple_repeat Simple_repeat 1 97 0 180 281 134 24 chr18 38669467 38669549 -47319385 + L3 LINE CR1 1332 1422 -155 4343 179 58 70 chr18 38670414 38671481 -47317453 + HSMAR2 DNA Mariner 2 1052 -250 7654 28 0 5 chr18 38671481 38672433 -47316501 - L1PA3 LINE L1 0 6155 5205 4343 179 58 70 chr18 38672433 38672681 -47316253 + HSMAR2 DNA Mariner 1052 1301 -1 24 0 0 0 chr18 38674053 38674077 -47314857 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr18 38674117 38674139 -47314795 + AT_rich Low_complexity Low_complexity 1 22 0 1548 255 58 32 chr18 38675114 38675766 -47313168 + L1MEc LINE L1 35 703 -5693 246 326 11 11 chr18 38676892 38676981 -47311953 + MIR SINE MIR 23 111 -97 * 305 225 25 25 chr18 38676980 38677060 -47311874 + L2 LINE L2 3234 3313 0 245 204 0 19 chr18 38677065 38677119 -47311815 + MIR3 SINE MIR 118 170 -38 1054 291 36 27 chr18 38677881 38678293 -47310641 + HsTC2a DNA Tc2 1 416 -328 893 260 112 81 chr18 38678548 38678709 -47310225 + MLT1H LTR MaLR 43 198 -351 2208 117 0 3 chr18 38678709 38679007 -47309927 + AluSx SINE Alu 1 297 -15 893 260 112 81 chr18 38679007 38679337 -47309597 + MLT1H LTR MaLR 198 549 0 212 320 31 31 chr18 38680620 38680717 -47308217 - L2 LINE L2 -8 3305 3209 210 154 0 0 chr18 38681160 38681199 -47307735 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 2355 72 0 29 chr18 38681545 38681852 -47307082 - AluY SINE Alu -13 298 1 697 73 0 0 chr18 38681996 38682092 -47306842 + L1MA1 LINE L1 6204 6299 -3 1281 197 62 45 chr18 38682247 38682603 -47306331 - MLT1A1 LTR MaLR -2 363 2 1406 57 0 0 chr18 38683467 38683643 -47305291 + AluY SINE Alu 129 304 -7 2513 49 10 7 chr18 38683990 38684298 -47304636 - AluY SINE Alu -1 310 2 34 72 0 0 chr18 38684931 38685000 -47303934 + AT_rich Low_complexity Low_complexity 1 69 0 231 88 0 0 chr18 38686133 38686167 -47302767 + (TGGA)n Simple_repeat Simple_repeat 3 36 0 22 0 0 0 chr18 38686277 38686299 -47302635 + AT_rich Low_complexity Low_complexity 1 22 0 1224 225 0 12 chr18 38687963 38688203 -47300731 - AluJb SINE Alu -75 237 1 21 0 0 0 chr18 38688343 38688364 -47300570 + AT_rich Low_complexity Low_complexity 1 21 0 208 210 95 61 chr18 38689202 38689292 -47299642 - MIR SINE MIR -67 141 45 24 32 0 0 chr18 38689848 38689879 -47299055 + AT_rich Low_complexity Low_complexity 1 31 0 229 344 94 8 chr18 38689968 38690096 -47298838 - L2 LINE L2 0 3272 3134 187 260 42 52 chr18 38691167 38691263 -47297671 - L2 LINE L2 -188 3084 2990 295 343 106 88 chr18 38691401 38691675 -47297259 - L2 LINE L2 0 3272 2994 3996 121 18 21 chr18 38692712 38693324 -47295610 - LTR9 LTR ERV1 0 612 3 1408 131 40 6 chr18 38694108 38694543 -47294391 + LTR54 LTR ERV1 1 510 0 229 357 14 0 chr18 38695349 38695419 -47293515 - L2 LINE L2 -52 3220 3150 1820 204 35 60 chr18 38696902 38697422 -47291512 + LTR31 LTR ERV1 104 610 -9 4040 124 8 14 chr18 38698724 38699361 -47289573 - MER41B LTR ERV1 -2 633 1 529 301 11 28 chr18 38699930 38700106 -47288828 - L2 LINE L2 -1938 1376 1204 485 270 84 5 chr18 38700365 38700611 -47288323 - L1M4 LINE L1 -387 5791 5514 456 279 68 21 chr18 38700613 38700803 -47288131 - L2 LINE L2 -2154 1160 962 305 348 30 49 chr18 38701498 38701662 -47287272 + MER91A DNA MER1_type 19 179 -17 234 203 34 0 chr18 38703107 38703166 -47285768 - MLT1G1 LTR MaLR -1 594 534 234 219 12 49 chr18 38703167 38703249 -47285685 - MLT1H LTR MaLR -150 405 327 5783 111 2 31 chr18 38703351 38704184 -47284750 - L1PA14 LINE L1 -3 6158 5303 252 0 0 0 chr18 38704184 38704212 -47284722 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1728 89 129 4 chr18 38704213 38704461 -47284473 - AluY SINE Alu -32 279 1 5783 111 2 31 chr18 38704461 38704800 -47284134 - L1PA14 LINE L1 -857 5304 4993 7858 183 21 6 chr18 38704800 38706443 -47282491 + L1PA14 LINE L1 3321 4988 -1158 372 285 35 11 chr18 38706445 38706627 -47282307 - MLT1H LTR MaLR -341 208 1 545 328 44 11 chr18 38907069 38907252 -47081682 + MIR SINE MIR 48 236 -26 359 315 45 18 chr18 38907307 38907418 -47081516 - MIR SINE MIR -64 144 31 2013 144 7 10 chr18 38908330 38908636 -47080298 - AluJb SINE Alu -7 305 1 324 319 208 0 chr18 38908958 38909174 -47079760 + L1M4 LINE L1 4016 4276 -1870 531 172 52 0 chr18 38909270 38909386 -47079548 - THE1B LTR MaLR 0 364 243 7396 99 36 0 chr18 38909529 38910604 -47078330 + THE1-int LTR MaLR 319 1432 -148 213 376 129 11 chr18 38910867 38911053 -47077881 - L2 LINE L2 -1143 2171 1964 2220 92 7 3 chr18 38911053 38911357 -47077577 + AluY SINE Alu 1 305 -6 1397 214 97 26 chr18 38913028 38913449 -47075485 + LTR40b LTR ERVL 1 451 -11 1380 254 189 19 chr18 38913601 38914172 -47074762 - L2 LINE L2 -910 2404 1737 2086 110 0 7 chr18 38914195 38914477 -47074457 - AluSq SINE Alu -31 282 3 324 195 232 0 chr18 38914668 38914750 -47074184 - AluJ/FLAM SINE Alu -201 101 1 1095 172 6 0 chr18 38915457 38927168 -47061766 - ALR/Alpha Satellite centromeric 0 11784 1 1027 185 7 0 chr18 38927301 38928971 -47059963 - ALR/Alpha Satellite centromeric 0 1680 1 817 193 8 0 chr18 38929099 38929360 -47059574 + GA-rich Low_complexity Low_complexity 1 263 0 183 42 0 0 chr18 38929357 38929381 -47059553 + (CAAG)n Simple_repeat Simple_repeat 2 25 0 * 1627 194 59 0 chr18 38929448 38929772 -47059162 - MER2 DNA MER2_type -1 343 1 1243 191 93 77 chr18 38930594 38930982 -47057952 - MSTD LTR MaLR -2 394 1 1790 164 48 10 chr18 38932660 38932953 -47055981 - AluSx SINE Alu -6 306 3 247 254 14 0 chr18 38934267 38934338 -47054596 + MLT1J2 LTR MaLR 92 163 -287 213 286 250 24 chr18 38935466 38935634 -47053300 + MIR SINE MIR 15 220 -42 * 759 319 133 7 chr18 38935630 38936189 -47052745 + L2 LINE L2 2664 3313 0 704 286 95 9 chr18 38936563 38936794 -47052140 - MIR SINE MIR -5 257 7 317 312 65 24 chr18 38936983 38937153 -47051781 + MIR3 SINE MIR 30 206 -2 22 35 0 0 chr18 38938199 38938228 -47050706 + AT_rich Low_complexity Low_complexity 1 29 0 207 308 39 0 chr18 38939527 38939605 -47049329 - L2 LINE L2 -51 3262 3182 998 217 101 44 chr18 38939858 38939920 -47049014 - MER39 LTR ERV1 -41 666 609 2227 108 3 0 chr18 38939920 38940216 -47048718 - AluY SINE Alu -14 297 1 998 217 101 44 chr18 38940216 38940540 -47048394 - MER39 LTR ERV1 -98 609 258 463 291 41 50 chr18 38941001 38941202 -47047732 + MIR SINE MIR 32 230 -32 393 271 30 69 chr18 38941569 38941886 -47047048 + LTR33 LTR ERVL 56 431 -90 384 22 0 0 chr18 38942257 38942302 -47046632 + (CA)n Simple_repeat Simple_repeat 2 46 0 344 301 48 0 chr18 38942564 38942667 -47046267 - MIR SINE MIR -80 128 21 727 306 20 60 chr18 38943501 38943848 -47045086 + LTR16A LTR ERVL 118 450 0 26 30 0 0 chr18 38945064 38945097 -47043837 + AT_rich Low_complexity Low_complexity 1 33 0 602 280 156 31 chr18 38945336 38945939 -47042995 - L1MC4a LINE L1 -1868 5940 5263 307 309 67 51 chr18 38946891 38947069 -47041865 - MIR SINE MIR -2 260 80 576 232 137 16 chr18 38947708 38947898 -47041036 + MER21B LTR ERV1 140 352 -511 545 254 91 72 chr18 38947920 38948196 -47040738 + MER21A LTR ERV1 528 808 -123 222 292 86 44 chr18 38948438 38948556 -47040378 + MIR SINE MIR 2 127 -81 287 303 141 0 chr18 38948717 38948859 -47040075 - MIR SINE MIR -51 211 50 2138 116 3 3 chr18 38948959 38949252 -47039682 + AluSp SINE Alu 1 293 -20 292 292 44 105 chr18 38949423 38949738 -47039196 - MLT1J LTR MaLR -105 406 111 2179 134 0 25 chr18 38950231 38950574 -47038360 + AluSx SINE Alu 1 335 0 1904 159 0 25 chr18 38950879 38951199 -47037735 + AluSx SINE Alu 1 312 0 200 111 28 0 chr18 38951282 38951318 -47037616 + GA-rich Low_complexity Low_complexity 1 37 0 1025 213 28 127 chr18 38951426 38951725 -47037209 + MLT1B LTR MaLR 1 246 -144 1407 188 59 19 chr18 38951725 38952040 -47036894 + AluJb SINE Alu 2 327 0 1025 213 28 127 chr18 38952040 38952172 -47036762 + MLT1B LTR MaLR 246 390 0 389 326 110 18 chr18 38955086 38955304 -47033630 + L2 LINE L2 2883 3120 -193 522 359 92 33 chr18 38956314 38956707 -47032227 - L2 LINE L2 0 3313 2898 2295 263 88 79 chr18 38956714 38958026 -47030908 + L1MDa LINE L1 9 1331 -5209 180 265 20 0 chr18 38958455 38958504 -47030430 + L3b LINE CR1 1532 1581 -2 24 32 0 0 chr18 38958709 38958740 -47030194 + AT_rich Low_complexity Low_complexity 1 31 0 1268 76 3 6 chr18 38958740 38958775 -47030159 + L1PA8A LINE L1 5460 5494 -637 1214 102 0 37 chr18 38958775 38958962 -47029972 - L1PA8A LINE L1 -2 6129 5950 1268 76 3 6 chr18 38958962 38959112 -47029822 + L1PA8A LINE L1 5494 5648 -483 2721 104 31 36 chr18 38959169 38959207 -47029727 - MLT2A1 LTR ERVL -2 442 405 315 85 0 0 chr18 38959207 38959254 -47029680 + (TA)n Simple_repeat Simple_repeat 1 47 0 2721 104 31 36 chr18 38959254 38959606 -47029328 - MLT2A1 LTR ERVL -39 405 52 2304 89 7 0 chr18 38959606 38959910 -47029024 - AluY SINE Alu -5 306 1 2721 104 31 36 chr18 38959910 38959962 -47028972 - MLT2A1 LTR ERVL -392 52 1 183 173 0 0 chr18 38959972 38960024 -47028910 + T-rich Low_complexity Low_complexity 1 52 0 194 43 106 0 chr18 38962312 38962359 -47026575 + (TTATA)n Simple_repeat Simple_repeat 5 56 0 369 320 105 7 chr18 38962713 38962866 -47026068 - MIR3 SINE MIR -16 192 25 23 68 0 0 chr18 38964969 38965013 -47023921 + AT_rich Low_complexity Low_complexity 1 44 0 21 57 0 0 chr18 38965846 38965881 -47023053 + AT_rich Low_complexity Low_complexity 1 35 0 295 219 0 0 chr18 38965998 38966071 -47022863 + L1ME2 LINE L1 6086 6158 -6 2251 230 86 0 chr18 38967388 38967910 -47021024 - MLT1F1 LTR MaLR 0 567 1 180 0 0 0 chr18 38967951 38967971 -47020963 + (A)n Simple_repeat Simple_repeat 1 20 0 472 164 0 132 chr18 38968172 38968324 -47020610 - MER96B DNA MER1_type? -283 134 3 382 339 21 36 chr18 38968414 38968606 -47020328 + MIR3 SINE MIR 6 194 -14 24 0 0 0 chr18 38968873 38968897 -47020037 + AT_rich Low_complexity Low_complexity 1 24 0 241 306 50 56 chr18 38969332 38969512 -47019422 + MIR SINE MIR 81 259 -3 592 257 188 0 chr18 38970768 38970986 -47017948 - MIR SINE MIR -3 259 1 259 284 0 0 chr18 38972267 38972334 -47016600 + L2 LINE L2 3247 3313 0 249 337 20 0 chr18 38973162 38973260 -47015674 + L3b LINE CR1 1102 1201 -382 482 268 12 42 chr18 38973867 38974035 -47014899 - L1MB7 LINE L1 -25 6159 5997 2957 63 36 25 chr18 38974265 38974749 -47014185 - MLT2A1 LTR ERVL 0 453 1 1210 180 9 0 chr18 38974751 38974979 -47013955 - L1MB7 LINE L1 -204 5974 5745 303 283 260 17 chr18 38975735 38975912 -47013022 - MIR SINE MIR -6 256 37 1430 202 3 52 chr18 38976540 38976867 -47012067 - AluJo SINE Alu -1 311 1 195 235 0 0 chr18 38977042 38977093 -47011841 + (CA)n Simple_repeat Simple_repeat 2 52 0 243 319 103 17 chr18 38977528 38977644 -47011290 + L2 LINE L2 3180 3305 -8 256 235 0 0 chr18 38978253 38978304 -47010630 - MIR3 SINE MIR -8 200 150 260 137 20 0 chr18 38978307 38978358 -47010576 + T-rich Low_complexity Low_complexity 1 52 0 234 191 0 0 chr18 38978358 38978405 -47010529 + A-rich Low_complexity Low_complexity 1 47 0 378 0 0 0 chr18 38978688 38978730 -47010204 + (TG)n Simple_repeat Simple_repeat 2 43 0 27 49 0 0 chr18 38979722 38979763 -47009171 + AT_rich Low_complexity Low_complexity 1 41 0 182 243 86 0 chr18 38979868 38979938 -47008996 - L2 LINE L2 -69 3244 3169 411 339 90 63 chr18 38980695 38981365 -47007569 - L1MEd LINE L1 -5410 709 22 328 325 83 6 chr18 38981416 38981585 -47007349 - MIR SINE MIR -10 252 71 774 362 91 17 chr18 38981727 38982533 -47006401 + L2 LINE L2 2365 3308 -5 1695 171 13 17 chr18 38984380 38984679 -47004255 + AluJo SINE Alu 1 298 -14 227 293 73 12 chr18 38984680 38984762 -47004172 - MIR SINE MIR -59 149 63 529 233 0 39 chr18 38984929 38985058 -47003876 + MLT1A2 LTR MaLR 1 124 -250 180 111 0 0 chr18 38985634 38985661 -47003273 + (TG)n Simple_repeat Simple_repeat 1 27 0 228 125 54 0 chr18 38986511 38986555 -47002379 + (TA)n Simple_repeat Simple_repeat 2 51 -9 1966 152 0 0 chr18 38986555 38986852 -47002082 + AluSx SINE Alu 1 297 -15 228 125 54 0 chr18 38986852 38986863 -47002071 + (TA)n Simple_repeat Simple_repeat 51 60 0 351 0 0 0 chr18 38986863 38986902 -47002032 + (CA)n Simple_repeat Simple_repeat 2 40 0 470 228 84 12 chr18 38986906 38987073 -47001861 - MER33 DNA MER1_type -108 216 38 21 82 0 0 chr18 38987129 38987178 -47001756 + AT_rich Low_complexity Low_complexity 1 49 0 4269 157 68 67 chr18 38987808 38988876 -47000058 + MER11C LTR ERVK 3 1071 0 4503 140 4 3 chr18 38989380 38990095 -46998839 - L1PA16 LINE L1 -9 6157 5442 1438 207 3 61 chr18 38990112 38990441 -46998493 - AluJb SINE Alu 0 312 3 194 286 51 51 chr18 38991186 38991284 -46997650 - MIR SINE MIR -51 211 114 369 348 0 81 chr18 38993346 38993593 -46995341 - MIR SINE MIR -34 228 2 233 264 94 28 chr18 38993597 38993703 -46995231 + MIR SINE MIR 100 212 -50 986 162 34 0 chr18 38994888 38995067 -46993867 + L1M3 LINE L1 5352 5536 -644 257 254 0 34 chr18 38996111 38996170 -46992764 + L2 LINE L2 3204 3260 -12 234 62 0 0 chr18 38996175 38996207 -46992727 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 314 294 55 9 chr18 38998181 38998290 -46990644 + MIR3 SINE MIR 72 185 -23 413 326 47 39 chr18 39000404 39000637 -46988297 - MIR SINE MIR -8 254 20 288 302 0 12 chr18 39002235 39002321 -46986613 + (TG)n Simple_repeat Simple_repeat 2 86 0 745 222 104 17 chr18 39002843 39003073 -46985861 - MIR SINE MIR 0 262 13 238 278 0 0 chr18 39003297 39003369 -46985565 + A-rich Low_complexity Low_complexity 1 72 0 243 0 0 0 chr18 39003495 39003522 -46985412 + (TG)n Simple_repeat Simple_repeat 2 28 0 401 227 102 0 chr18 39004152 39004240 -46984694 + L2 LINE L2 3211 3307 -6 267 254 49 3 chr18 39004595 39004723 -46984211 - L1MC4a LINE L1 0 8041 7737 * 1518 267 103 19 chr18 39004702 39005286 -46983648 - L1MC4 LINE L1 -1039 7003 6371 309 267 0 0 chr18 39005309 39005369 -46983565 + Tigger5 DNA MER2_type 2261 2320 -3 328 238 0 0 chr18 39005372 39005435 -46983499 - Tigger5 DNA MER2_type -2259 64 2 628 261 23 0 chr18 39005479 39005655 -46983279 - L1ME2 LINE L1 -19 6381 6202 236 143 18 0 chr18 39005678 39005734 -46983200 + T-rich Low_complexity Low_complexity 4 60 0 3864 256 54 9 chr18 39005769 39007082 -46981852 - L1ME2 LINE L1 -926 5456 4085 1204 250 24 4 chr18 39007101 39007543 -46981391 - L1ME2 LINE L1 -3698 2690 2226 922 264 46 28 chr18 39007546 39008023 -46980911 - L1ME LINE L1 -451 5782 5305 471 299 53 62 chr18 39008145 39008449 -46980485 - L1ME LINE L1 -5117 1279 979 536 187 0 20 chr18 39008643 39008899 -46980035 + GA-rich Low_complexity Low_complexity 1 251 0 240 262 177 21 chr18 39009032 39009173 -46979761 + L2 LINE L2 3061 3223 -90 192 77 0 0 chr18 39009846 39009872 -46979062 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 199 299 91 61 chr18 39011188 39011385 -46977549 - L3 LINE CR1 -1033 544 342 197 297 94 47 chr18 39012224 39012352 -46976582 + L2 LINE L2 3176 3309 -4 299 349 99 41 chr18 39013546 39013890 -46975044 - L2 LINE L2 -5 3267 2904 419 292 29 57 chr18 39013915 39014124 -46974810 - L2 LINE L2 -623 2691 2489 323 323 21 0 chr18 39014337 39014433 -46974501 + MER5B DNA MER1_type 1 98 -80 595 295 102 31 chr18 39014731 39015151 -46973783 - MARNA DNA Mariner -126 460 11 186 43 0 0 chr18 39015878 39015901 -46973033 + (TG)n Simple_repeat Simple_repeat 2 24 0 525 269 0 0 chr18 39015934 39016053 -46972881 - MIR SINE MIR -91 171 53 198 0 0 0 chr18 39017196 39017218 -46971716 + (A)n Simple_repeat Simple_repeat 1 22 0 608 152 4 10 chr18 39017493 39017743 -46971191 + AluJ SINE Alu 1 297 -15 189 229 157 0 chr18 39017798 39017873 -46971061 + MIR SINE MIR 69 152 -62 349 365 17 9 chr18 39017962 39018077 -46970857 - MIR SINE MIR -66 142 27 372 317 109 15 chr18 39018344 39018546 -46970388 + MIR SINE MIR 32 252 -10 339 176 20 29 chr18 39018890 39018992 -46969942 + (TATATG)n Simple_repeat Simple_repeat 2 102 0 186 43 0 0 chr18 39019707 39019730 -46969204 + (GA)n Simple_repeat Simple_repeat 2 24 0 319 217 0 0 chr18 39020620 39020689 -46968245 - L1ME3A LINE L1 -7 6163 6095 287 237 11 0 chr18 39022196 39022289 -46966645 + (TA)n Simple_repeat Simple_repeat 2 95 0 183 175 100 0 chr18 39024552 39024592 -46964342 + L2 LINE L2 3181 3224 -89 197 81 0 27 chr18 39024811 39024848 -46964086 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 1322 241 18 102 chr18 39024922 39025447 -46963487 + MLT2B1 LTR ERVL 1 476 -44 396 0 0 0 chr18 39025447 39025491 -46963443 + (CA)n Simple_repeat Simple_repeat 2 45 0 1322 241 18 102 chr18 39025491 39025533 -46963401 + MLT2B1 LTR ERVL 476 520 0 185 346 87 19 chr18 39027275 39027379 -46961555 + MIR SINE MIR 59 169 -93 407 283 122 17 chr18 39029346 39029526 -46959408 + LTR50 LTR ERVL 425 623 -172 398 221 74 34 chr18 39029609 39029668 -46959266 + LTR50 LTR ERVL 633 688 -107 2087 111 3 10 chr18 39029668 39029956 -46958978 - AluSx SINE Alu -26 286 1 398 221 74 34 chr18 39029956 39030045 -46958889 + LTR50 LTR ERVL 688 787 -8 327 25 0 0 chr18 39031985 39032025 -46956909 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 216 310 28 28 chr18 39032031 39032102 -46956832 - L3 LINE CR1 -401 1176 1106 262 344 157 24 chr18 39032673 39033132 -46955802 + L2 LINE L2 2418 2937 -377 25 0 0 0 chr18 39035898 39035923 -46953011 + AT_rich Low_complexity Low_complexity 1 25 0 235 219 37 61 chr18 39036778 39036860 -46952074 - L2 LINE L2 -6 3266 3187 1408 318 108 20 chr18 39036881 39037419 -46951515 + MER115 DNA AcHobo 107 691 -2 25 65 0 0 chr18 39038629 39038675 -46950259 + AT_rich Low_complexity Low_complexity 1 46 0 1041 318 128 11 chr18 39038710 39039406 -46949528 - Charlie7 DNA MER1_type -1835 777 1 1918 102 4 11 chr18 39039751 39040017 -46948917 - AluSg1 SINE Alu -12 297 34 298 295 50 43 chr18 39040048 39040187 -46948747 + MER91C DNA MER1_type 1 140 0 199 184 61 0 chr18 39042837 39042886 -46946048 - L2 LINE L2 0 3313 3262 332 290 92 8 chr18 39043220 39043351 -46945583 - MIR SINE MIR -92 170 29 291 228 80 18 chr18 39043396 39043496 -46945438 + MIR3 SINE MIR 72 181 -27 21 0 0 0 chr18 39043720 39043741 -46945193 + AT_rich Low_complexity Low_complexity 1 21 0 1970 123 0 7 chr18 39044570 39044878 -46944056 + AluSg SINE Alu 1 306 0 517 208 104 40 chr18 39045233 39045358 -46943576 - FLAM_A SINE Alu 0 133 1 207 338 142 27 chr18 39045841 39046060 -46942874 + MIR SINE MIR 6 249 -13 22 35 0 0 chr18 39046414 39046443 -46942491 + AT_rich Low_complexity Low_complexity 1 29 0 1008 158 2 0 chr18 39046505 39046820 -46942114 + GA-rich Low_complexity Low_complexity 2 495 0 217 284 12 25 chr18 39046834 39046916 -46942018 + GA-rich Low_complexity Low_complexity 1 80 0 244 242 44 44 chr18 39047193 39047284 -46941650 - MLT1I LTR MaLR -3 406 316 637 187 22 77 chr18 39048232 39048431 -46940503 - MLT2C1 LTR ERVL 0 663 212 347 197 8 26 chr18 39048435 39048552 -46940382 + CT-rich Low_complexity Low_complexity 3 117 0 791 204 99 5 chr18 39048572 39048773 -46940161 - MLT2C1 LTR ERVL -177 220 1 1953 146 7 10 chr18 39050129 39050431 -46938503 + AluSx SINE Alu 1 301 -11 224 149 21 0 chr18 39050431 39050478 -46938456 + GA-rich Low_complexity Low_complexity 1 48 0 214 333 37 0 chr18 39050622 39050703 -46938231 + MIR3 SINE MIR 113 196 -12 2042 146 122 10 chr18 39051498 39051883 -46937051 + MSTA LTR MaLR 1 428 0 268 360 33 52 chr18 39052044 39052197 -46936737 - MIR SINE MIR -92 170 21 27 0 0 0 chr18 39052693 39052720 -46936214 + AT_rich Low_complexity Low_complexity 1 27 0 2179 120 0 3 chr18 39053223 39053522 -46935412 + AluSx SINE Alu 1 298 -14 22 35 0 0 chr18 39053530 39053559 -46935375 + AT_rich Low_complexity Low_complexity 1 29 0 180 222 56 37 chr18 39053840 39053894 -46935040 + MER5A DNA MER1_type 51 105 -84 * 285 232 116 21 chr18 39053848 39053943 -46934991 - MER5A DNA MER1_type -48 141 38 632 268 36 12 chr18 39054223 39054391 -46934543 - MER5B DNA MER1_type -6 172 1 470 180 80 30 chr18 39054399 39054499 -46934435 + MER5A DNA MER1_type 1 105 -84 190 343 10 50 chr18 39054517 39054616 -46934318 - MER5A DNA MER1_type -24 165 71 231 329 0 0 chr18 39054720 39054790 -46934144 + MIR SINE MIR 42 111 -97 234 283 19 19 chr18 39055108 39055214 -46933720 + CT-rich Low_complexity Low_complexity 2 107 0 231 326 163 28 chr18 39056616 39056831 -46932103 - L3b LINE CR1 -15 1568 1325 252 0 0 0 chr18 39057574 39057602 -46931332 + (A)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr18 39058331 39058353 -46930581 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr18 39059365 39059387 -46929547 + AT_rich Low_complexity Low_complexity 1 22 0 723 282 86 5 chr18 39059617 39059826 -46929108 + MIR SINE MIR 21 246 -16 336 223 0 0 chr18 39061558 39061661 -46927273 + CT-rich Low_complexity Low_complexity 3 105 0 4493 242 114 48 chr18 39062293 39064105 -46924829 + L1MC2 LINE L1 438 2368 -4172 1678 247 74 62 chr18 39064141 39064788 -46924146 + L1MDa LINE L1 70 724 -5321 340 73 0 0 chr18 39064789 39064830 -46924104 - LTR3b LTR ERVK 0 500 460 3253 105 16 36 chr18 39064831 39065337 -46923597 - LTR3b LTR ERVK -4 496 1 544 215 8 15 chr18 39065337 39065467 -46923467 + L1MDa LINE L1 720 848 -5197 * 2421 249 60 29 chr18 39065466 39067312 -46921622 - L1 LINE L1 -3733 3373 1635 1235 275 132 51 chr18 39067370 39068060 -46920874 - L1 LINE L1 -6260 770 25 1436 230 41 30 chr18 39068093 39068653 -46920281 + L1MC2 LINE L1 4597 5162 -1378 3086 239 28 18 chr18 39068709 39069528 -46919406 + L1MC2 LINE L1 5911 6737 -1 833 220 78 32 chr18 39069524 39069911 -46919023 + L1MDa LINE L1 2383 2823 -3890 * 1451 209 3 21 chr18 39070188 39070475 -46918459 + AluJo SINE Alu 1 282 -30 1009 213 72 3 chr18 39070697 39070988 -46917946 - MER33 DNA MER1_type -1 323 13 328 332 65 32 chr18 39071020 39071237 -46917697 - MLT1J2 LTR MaLR -223 227 4 183 222 0 0 chr18 39071646 39071691 -46917243 + (TATG)n Simple_repeat Simple_repeat 2 46 0 1809 271 95 47 chr18 39071693 39071868 -46917066 - L1M4c LINE L1 -4094 3044 2879 1457 209 7 10 chr18 39071868 39072170 -46916764 - AluJo SINE Alu -11 301 1 1809 271 95 47 chr18 39072170 39073586 -46915348 - L1M4c LINE L1 -4259 2879 1224 5858 164 72 91 chr18 39073744 39074183 -46914751 - L1MCa LINE L1 -4866 1560 1114 1661 188 53 39 chr18 39074183 39074539 -46914395 - MLT1A1 LTR MaLR 0 365 5 5858 164 72 91 chr18 39074539 39075644 -46913290 - L1MCa LINE L1 -5312 1114 45 403 259 40 76 chr18 39075903 39076230 -46912704 - L1M4c LINE L1 -4803 1760 1299 1688 220 52 45 chr18 39077283 39077747 -46911187 + MLT1C LTR MaLR 1 467 0 278 247 95 68 chr18 39078211 39078401 -46910533 + MER112 DNA MER1_type 19 213 -47 1074 194 211 0 chr18 39078562 39078809 -46910125 + AluJb SINE Alu 4 302 0 183 382 45 0 chr18 39081377 39081487 -46907447 + MIR SINE MIR 94 208 -54 201 305 0 17 chr18 39082057 39082116 -46906818 - MER5A DNA MER1_type -125 64 7 342 0 0 0 chr18 39082567 39082605 -46906329 + (CA)n Simple_repeat Simple_repeat 1 38 0 279 0 0 0 chr18 39082604 39082635 -46906299 + (GA)n Simple_repeat Simple_repeat 2 32 0 * 180 152 0 0 chr18 39083150 39083183 -46905751 + C-rich Low_complexity Low_complexity 3 35 0 323 172 0 17 chr18 39083258 39083316 -46905618 + MER112 DNA MER1_type 1 57 -203 21 0 0 0 chr18 39083411 39083432 -46905502 + AT_rich Low_complexity Low_complexity 1 21 0 2203 118 48 28 chr18 39083895 39084252 -46904682 + THE1B LTR MaLR 1 364 0 430 208 110 80 chr18 39084318 39084582 -46904352 + ORSL DNA AcHobo 1 272 -3 1881 202 38 29 chr18 39084854 39085390 -46903544 - MLT2A2 LTR ERVL 0 554 5 186 43 0 0 chr18 39085500 39085523 -46903411 + (CATA)n Simple_repeat Simple_repeat 2 24 0 21 57 0 0 chr18 39086141 39086176 -46902758 + AT_rich Low_complexity Low_complexity 1 35 0 353 318 125 33 chr18 39086411 39086716 -46902218 - L1M4 LINE L1 -1318 4828 4496 410 335 77 31 chr18 39086858 39087459 -46901475 - L1M4 LINE L1 -1723 4423 3786 1882 134 18 63 chr18 39087459 39087840 -46901094 - THE1B LTR MaLR 0 364 1 410 335 77 31 chr18 39087840 39087916 -46901018 - L1M4 LINE L1 -2360 3786 3715 390 311 0 0 chr18 39089484 39089587 -46899347 + L2 LINE L2 3204 3306 -7 689 175 63 21 chr18 39089927 39090113 -46898821 - THE1C LTR MaLR -171 193 1 292 57 0 0 chr18 39090248 39090283 -46898651 - THE1B LTR MaLR -7 357 323 311 213 250 15 chr18 39090294 39090430 -46898504 - LTR48 LTR ERV1 -297 490 323 298 294 0 0 chr18 39090538 39090606 -46898328 - MER34 LTR ERV1 -474 68 1 1827 234 61 77 chr18 39090956 39091641 -46897293 + LTR8 LTR ERV1 16 689 -2 741 218 96 34 chr18 39091641 39091910 -46897024 + MLT1B LTR MaLR 18 310 -157 32 0 0 0 chr18 39091954 39091986 -46896948 + AT_rich Low_complexity Low_complexity 1 32 0 368 210 62 0 chr18 39092168 39092249 -46896685 - MER103 DNA DNA -79 87 2 438 260 0 0 chr18 39093497 39093597 -46895337 + Charlie1a DNA MER1_type 76 175 -1280 7397 136 55 7 chr18 39094302 39095543 -46893391 + HSMAR2 DNA Mariner 3 1302 0 233 394 155 0 chr18 39096615 39096757 -46892177 - MIR3 SINE MIR -32 176 13 21 36 0 0 chr18 39097810 39097838 -46891096 + AT_rich Low_complexity Low_complexity 1 28 0 2107 114 0 0 chr18 39098477 39098802 -46890132 - AluSc SINE Alu 0 327 3 731 279 81 5 chr18 39099284 39099506 -46889428 + MER8 DNA MER2_type 1 239 0 577 99 22 0 chr18 39099591 39099682 -46889252 - AluSp/q SINE Alu -9 304 212 363 307 52 13 chr18 39100076 39100229 -46888705 - MIR SINE MIR -4 258 100 1657 165 41 10 chr18 39100434 39100725 -46888209 + AluJb SINE Alu 1 300 -12 26 50 0 0 chr18 39100896 39100936 -46887998 + AT_rich Low_complexity Low_complexity 1 40 0 241 292 0 0 chr18 39101337 39101402 -46887532 - MIR3 SINE MIR -7 201 137 307 264 22 55 chr18 39101863 39101954 -46886980 - MIR3 SINE MIR -6 202 115 580 311 114 17 chr18 39102446 39102745 -46886189 - MARNA DNA Mariner -93 493 166 274 349 39 8 chr18 39102837 39102966 -46885968 + MIR3 SINE MIR 10 142 -66 884 210 0 28 chr18 39106818 39106994 -46881940 - MER58B DNA MER1_type -3 338 168 213 290 159 0 chr18 39107233 39107302 -46881632 + MIR3 SINE MIR 117 196 -12 4261 183 37 41 chr18 39107378 39108371 -46880563 - L1MB3 LINE L1 0 6183 5196 358 22 0 0 chr18 39108371 39108417 -46880517 - L1PA3 LINE L1 0 6155 6110 4261 183 37 41 chr18 39108417 39108869 -46880065 - L1MB3 LINE L1 -987 5196 4744 21 36 0 0 chr18 39109517 39109545 -46879389 + AT_rich Low_complexity Low_complexity 1 28 0 1885 94 138 5 chr18 39110649 39111002 -46877932 - LTR7 LTR ERV1 0 450 1 373 252 116 25 chr18 39111085 39111327 -46877607 + HAL1 LINE L1 2163 2426 -81 199 260 27 55 chr18 39111379 39111452 -46877482 - L3 LINE CR1 -908 669 599 * 922 321 46 22 chr18 39111408 39111819 -46877115 - L2 LINE L2 -1154 2160 1740 291 277 101 47 chr18 39111858 39112006 -46876928 - L2 LINE L2 -1830 1484 1329 220 369 45 25 chr18 39112014 39112171 -46876763 + L3 LINE CR1 1301 1460 -117 200 297 0 0 chr18 39113292 39113356 -46875578 + T-rich Low_complexity Low_complexity 1 64 0 267 316 58 52 chr18 39113541 39113715 -46875219 - L3 LINE CR1 -79 1498 1324 362 289 101 44 chr18 39114183 39114634 -46874300 + MLT1H LTR MaLR 32 588 -7 24 32 0 0 chr18 39115463 39115494 -46873440 + AT_rich Low_complexity Low_complexity 1 31 0 180 364 30 61 chr18 39115736 39115868 -46873066 + MIR3 SINE MIR 32 159 -49 451 287 33 0 chr18 39115922 39116044 -46872890 - MIR3 SINE MIR -6 202 77 201 39 0 0 chr18 39116673 39116699 -46872235 + (T)n Simple_repeat Simple_repeat 1 26 0 240 382 0 0 chr18 39118130 39118253 -46870681 - L3b LINE CR1 -345 1238 1116 393 22 0 0 chr18 39119210 39119256 -46869678 + (CA)n Simple_repeat Simple_repeat 1 46 0 387 0 0 0 chr18 39120022 39120065 -46868869 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 186 284 39 90 chr18 39120244 39120399 -46868535 - MIR SINE MIR -70 192 46 1391 191 19 10 chr18 39121422 39121731 -46867203 - L1MA9 LINE L1 -1790 4356 4045 3691 172 62 54 chr18 39121738 39122796 -46866138 + L1MA9 LINE L1 4332 5460 -852 302 104 0 0 chr18 39122796 39122844 -46866090 - U5 snRNA snRNA -68 48 1 3691 172 62 54 chr18 39122844 39123512 -46865422 + L1MA9 LINE L1 5460 6121 -191 288 0 0 0 chr18 39123607 39123639 -46865295 + (CA)n Simple_repeat Simple_repeat 2 33 0 472 182 33 5 chr18 39123647 39123764 -46865170 + L1MA9 LINE L1 6173 6291 0 197 341 46 75 chr18 39124541 39124846 -46864088 + L2 LINE L2 2458 2753 -561 294 341 67 67 chr18 39124884 39125139 -46863795 + L2 LINE L2 2926 3180 -92 242 242 63 42 chr18 39126658 39126753 -46862181 - L1MC4 LINE L1 -1332 6710 6614 256 278 75 75 chr18 39127100 39127233 -46861701 + MIR SINE MIR 20 152 -110 212 213 49 33 chr18 39127336 39127347 -46861587 - L2 LINE L2 -208 3064 3055 2196 103 91 24 chr18 39127347 39127688 -46861246 - THE1B LTR MaLR 0 364 1 212 213 49 33 chr18 39127688 39127737 -46861197 - L2 LINE L2 -217 3055 3003 2451 76 0 0 chr18 39129476 39129777 -46859157 + AluY SINE Alu 1 301 -10 221 305 34 0 chr18 39130417 39130476 -46858458 - MER91 DNA MER1_type -76 64 4 24 0 0 0 chr18 39132812 39132836 -46856098 + AT_rich Low_complexity Low_complexity 1 24 0 413 302 47 47 chr18 39133019 39133234 -46855700 - MIR SINE MIR -32 230 16 225 296 102 20 chr18 39133458 39133556 -46855378 + L2 LINE L2 3159 3264 -8 325 298 204 21 chr18 39133590 39133781 -46855153 + MIR SINE MIR 3 228 -34 281 306 11 27 chr18 39134210 39134351 -46854583 - MIR SINE MIR -80 128 35 330 331 40 68 chr18 39135672 39135862 -46853072 + MIR SINE MIR 25 206 -56 284 234 16 16 chr18 39136252 39136316 -46852618 + L2 LINE L2 3193 3256 -57 21 71 0 0 chr18 39136852 39136894 -46852040 + AT_rich Low_complexity Low_complexity 1 42 0 286 317 59 25 chr18 39139449 39139815 -46849119 - LTR33 LTR ERVL -4 517 99 203 189 0 0 chr18 39140169 39140206 -46848728 + L2 LINE L2 3017 3053 -219 210 301 114 32 chr18 39140330 39140453 -46848481 + L2 LINE L2 3136 3268 -4 1875 201 17 6 chr18 39143401 39143760 -46845174 - MLT1A1 LTR MaLR 0 365 3 404 321 43 5 chr18 39144055 39144242 -46844692 + MIR SINE MIR 30 223 -39 21 0 0 0 chr18 39144595 39144616 -46844318 + AT_rich Low_complexity Low_complexity 1 21 0 444 37 0 0 chr18 39144738 39144792 -46844142 + (TG)n Simple_repeat Simple_repeat 2 55 0 195 100 0 0 chr18 39145030 39145060 -46843874 + (TG)n Simple_repeat Simple_repeat 2 31 0 435 303 41 0 chr18 39146828 39146973 -46841961 + MIR SINE MIR 106 256 -6 294 73 0 0 chr18 39147242 39147283 -46841651 + (CA)n Simple_repeat Simple_repeat 2 42 0 183 156 0 0 chr18 39147781 39147813 -46841121 + (CA)n Simple_repeat Simple_repeat 2 33 0 2142 276 94 70 chr18 39147835 39148246 -46840688 - HAL1 LINE L1 -289 2218 1819 198 0 0 0 chr18 39148246 39148268 -46840666 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1896 131 18 0 chr18 39148271 39148554 -46840380 - AluSx SINE Alu -24 288 1 2142 276 94 70 chr18 39148554 39150021 -46838913 - HAL1 LINE L1 -689 1818 290 303 317 93 25 chr18 39150092 39150253 -46838681 - HAL1 LINE L1 -2288 219 48 205 290 145 86 chr18 39150859 39151080 -46837854 - L3 LINE CR1 0 1577 1344 306 194 0 0 chr18 39151330 39151397 -46837537 + (TG)n Simple_repeat Simple_repeat 1 67 0 215 231 0 19 chr18 39151851 39151903 -46837031 + (ATG)n Simple_repeat Simple_repeat 2 52 0 410 92 62 0 chr18 39153279 39153344 -46835590 - L1PA10 LINE L1 0 6168 6100 244 298 57 24 chr18 39153501 39153625 -46835309 - MLT1J LTR MaLR -4 507 380 1974 212 24 40 chr18 39156904 39157409 -46831525 + MLT1D LTR MaLR 3 499 -6 244 280 27 73 chr18 39157507 39157657 -46831277 + MLT1K LTR MaLR 418 560 -28 257 385 8 15 chr18 39158711 39158841 -46830093 - L2 LINE L2 -2 3270 3142 219 69 0 0 chr18 39159045 39159074 -46829860 + (TA)n Simple_repeat Simple_repeat 2 30 0 221 75 25 0 chr18 39159238 39159278 -46829656 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 287 287 93 0 chr18 39160450 39160579 -46828355 + MER58C DNA MER1_type 57 197 -18 204 306 63 18 chr18 39163649 39163760 -46825174 - MIR SINE MIR -66 196 81 288 225 101 77 chr18 39164654 39164823 -46824111 + MIR SINE MIR 16 188 -74 257 318 140 22 chr18 39166275 39166454 -46822480 + MIR SINE MIR 13 212 -50 722 287 39 12 chr18 39167458 39167712 -46821222 + MIR SINE MIR 2 262 0 431 330 123 6 chr18 39167727 39167906 -46821028 + MIR SINE MIR 25 224 -38 345 62 0 0 chr18 39169390 39169438 -46819496 + (TC)n Simple_repeat Simple_repeat 2 49 0 288 0 0 0 chr18 39169438 39169470 -46819464 + (CA)n Simple_repeat Simple_repeat 1 32 0 1350 238 51 34 chr18 39169579 39170049 -46818885 - L1ME3 LINE L1 -201 5961 5484 282 29 0 0 chr18 39171474 39171509 -46817425 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 265 259 17 0 chr18 39172101 39172159 -46816775 + L2 LINE L2 3250 3308 -5 1039 240 50 68 chr18 39172474 39172857 -46816077 + LTR16A1 LTR ERVL 82 457 0 444 327 80 35 chr18 39172857 39173196 -46815738 + HERV16 LTR ERVL 1 354 -4642 491 346 39 21 chr18 39174001 39174281 -46814653 + HERV16 LTR ERVL 1250 1534 -3462 750 322 67 11 chr18 39174365 39174801 -46814133 + HERV16 LTR ERVL 2667 3131 -1925 1002 201 48 5 chr18 39174820 39175009 -46813925 - MLT1A1 LTR MaLR 0 365 169 324 278 9 28 chr18 39175619 39175727 -46813207 + LTR16A1 LTR ERVL 48 153 -304 195 69 0 0 chr18 39175807 39175836 -46813098 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 432 184 13 0 chr18 39176459 39176535 -46812399 - MIR SINE MIR -16 246 170 229 225 211 0 chr18 39177684 39177755 -46811179 - MIR3 SINE MIR -3 205 120 2235 125 3 0 chr18 39177787 39178098 -46810836 + AluSx SINE Alu 1 312 0 9857 208 17 19 chr18 39178098 39181243 -46807691 - L1PA16 LINE L1 -25 6141 3007 2036 125 30 3 chr18 39181243 39181539 -46807395 - AluSg SINE Alu -6 304 1 9857 208 17 19 chr18 39181539 39181608 -46807326 - L1PA16 LINE L1 -3159 3007 2939 2911 215 94 113 chr18 39182376 39183371 -46805563 - L1MC4 LINE L1 -2 8040 7078 180 111 0 0 chr18 39183371 39183398 -46805536 + (TTCA)n Simple_repeat Simple_repeat 4 30 0 2911 215 94 113 chr18 39183398 39183851 -46805083 - L1MC4 LINE L1 -964 7078 6618 221 316 10 20 chr18 39183856 39183954 -46804980 + (TATATG)n Simple_repeat Simple_repeat 6 102 0 452 262 29 52 chr18 39183954 39184155 -46804779 - L1MC4a LINE L1 -1187 6621 6458 322 194 81 0 chr18 39184160 39184222 -46804712 - MER2 DNA MER2_type -1 344 278 768 206 77 5 chr18 39184267 39184461 -46804473 - MER2 DNA MER2_type -136 209 2 274 305 164 45 chr18 39185223 39185577 -46803357 + L3 LINE CR1 1061 1456 -121 1733 176 10 10 chr18 39185703 39185998 -46802936 - AluJo SINE Alu -17 295 1 1449 262 98 20 chr18 39186032 39186482 -46802452 - MLT1D LTR MaLR 0 505 21 275 279 63 9 chr18 39187070 39187181 -46801753 - MIR SINE MIR -93 169 53 5378 241 59 53 chr18 39189458 39190040 -46798894 + L1MC4a LINE L1 5767 6344 -1464 1774 165 17 41 chr18 39190040 39190385 -46798549 - MER1B DNA MER1_type 0 337 1 5378 241 59 53 chr18 39190385 39191832 -46797102 + L1MC4a LINE L1 6344 7808 0 1443 217 78 115 chr18 39192002 39192809 -46796125 + L1MC4 LINE L1 7266 8042 0 375 243 131 0 chr18 39192853 39192960 -46795974 + MIR SINE MIR 33 153 -109 311 346 48 24 chr18 39193187 39193395 -46795539 - L2 LINE L2 -874 2440 2228 663 257 17 6 chr18 39194510 39194685 -46794249 - MER5B DNA MER1_type 0 178 2 258 32 0 0 chr18 39194794 39194825 -46794109 + (CA)n Simple_repeat Simple_repeat 2 32 0 740 210 77 97 chr18 39196096 39196406 -46792528 - MLT1D LTR MaLR -201 304 1 3102 84 63 0 chr18 39196888 39197314 -46791620 + MLT2A2 LTR ERVL 1 453 0 222 289 88 26 chr18 39197994 39198108 -46790826 - L2 LINE L2 0 3313 3193 345 172 0 0 chr18 39198191 39198255 -46790679 + (TA)n Simple_repeat Simple_repeat 1 64 0 436 363 102 20 chr18 39198284 39199054 -46789880 - L2 LINE L2 -103 3210 2376 649 291 62 14 chr18 39199068 39199302 -46789632 - MLT1E3 LTR MaLR -158 468 213 556 266 121 4 chr18 39199303 39199551 -46789383 + L1MC4 LINE L1 7381 7657 -385 403 287 63 14 chr18 39199661 39199804 -46789130 - MER5A DNA MER1_type -2 187 38 361 284 39 24 chr18 39199695 39199822 -46789112 + MER5A DNA MER1_type 51 179 -10 * 348 130 0 0 chr18 39199872 39199941 -46788993 + (CA)n Simple_repeat Simple_repeat 2 70 0 1426 227 21 94 chr18 39199963 39200444 -46788490 - MLT2B1 LTR ERVL -74 446 1 244 267 0 0 chr18 39200533 39200593 -46788341 + CT-rich Low_complexity Low_complexity 3 62 0 21 0 0 0 chr18 39200894 39200915 -46788019 + AT_rich Low_complexity Low_complexity 1 21 0 1412 225 65 56 chr18 39200938 39201475 -46787459 - L1MC4 LINE L1 -120 7922 7381 837 285 172 17 chr18 39201476 39201830 -46787104 + MLT1E3 LTR MaLR 213 621 -3 443 234 24 133 chr18 39201833 39202081 -46786853 - L1MC4 LINE L1 -1048 6994 6774 303 322 79 9 chr18 39202160 39202374 -46786560 - L1ME3A LINE L1 -231 5939 5711 698 269 48 31 chr18 39202439 39202802 -46786132 - L1P1 LINE L1 -615 5540 5180 1491 213 50 34 chr18 39202802 39203183 -46785751 + MLT1B LTR MaLR 1 387 -3 698 269 48 31 chr18 39203183 39203330 -46785604 - L1P1 LINE L1 -975 5180 5037 931 299 104 29 chr18 39203558 39204298 -46784636 - L1ME3A LINE L1 -1292 4854 4007 2386 70 0 13 chr18 39204298 39204610 -46784324 - AluY SINE Alu -3 308 1 931 299 104 29 chr18 39204610 39204966 -46783968 - L1ME3A LINE L1 -2139 4007 3679 1344 305 34 2 chr18 39205041 39205483 -46783451 + LTR16C LTR ERVL 36 491 0 25 31 0 0 chr18 39205553 39205585 -46783349 + AT_rich Low_complexity Low_complexity 1 32 0 707 292 91 49 chr18 39205592 39205906 -46783028 - L1ME3A LINE L1 -2718 3428 3129 1552 181 0 27 chr18 39205906 39206198 -46782736 + AluJo SINE Alu 12 295 -17 707 292 91 49 chr18 39206198 39207139 -46781795 - L1ME3A LINE L1 -3017 3129 2120 260 250 94 0 chr18 39207431 39207527 -46781407 + L1ME2 LINE L1 5277 5381 -783 1431 259 40 35 chr18 39207536 39207639 -46781295 + L1ME2 LINE L1 5595 5696 -468 1587 194 35 0 chr18 39207639 39207923 -46781011 + AluJo SINE Alu 1 294 -18 1431 259 40 35 chr18 39207923 39208367 -46780567 + L1ME2 LINE L1 5696 6145 -19 202 189 0 0 chr18 39208473 39208510 -46780424 + (TGGA)n Simple_repeat Simple_repeat 2 38 0 973 294 70 30 chr18 39208650 39209305 -46779629 + L2 LINE L2 2625 3313 0 365 242 114 90 chr18 39209781 39209992 -46778942 + MIR SINE MIR 21 236 -26 23 0 0 0 chr18 39210086 39210109 -46778825 + AT_rich Low_complexity Low_complexity 1 23 0 251 396 35 0 chr18 39210902 39211046 -46777888 - MIR3 SINE MIR -16 192 44 297 364 57 11 chr18 39211179 39211355 -46777579 + MIR3 SINE MIR 16 199 -9 1523 176 45 70 chr18 39212211 39212585 -46776349 + MLT1A1 LTR MaLR 1 365 0 217 128 0 51 chr18 39213904 39213943 -46774991 + L2 LINE L2 3265 3301 -12 * 220 254 0 55 chr18 39213927 39213982 -46774952 - L2 LINE L2 -10 3262 3211 188 238 79 32 chr18 39214138 39214201 -46774733 + L2 LINE L2 3246 3311 -2 308 361 53 23 chr18 39216469 39216602 -46772332 - L2 LINE L2 -11 3261 3125 847 213 35 20 chr18 39216767 39216964 -46771970 + MER3 DNA MER1_type 5 204 -5 321 232 0 0 chr18 39217209 39217265 -46771669 + L2 LINE L2 3191 3246 -67 224 280 0 0 chr18 39217530 39217580 -46771354 + L2 LINE L2 3215 3264 -8 587 266 79 0 chr18 39219312 39219489 -46769445 + MIR SINE MIR 56 246 -16 237 322 119 34 chr18 39219800 39219977 -46768957 - MIR SINE MIR -66 196 5 262 290 0 0 chr18 39220430 39220499 -46768435 - MIR SINE MIR -117 145 77 2731 23 3 0 chr18 39221571 39221879 -46767055 - AluY SINE Alu -2 309 1 1032 261 67 19 chr18 39222554 39222926 -46766008 + HsTC2 DNA Tc2 1272 1837 -61 189 289 252 13 chr18 39223921 39224080 -46764854 - MIR SINE MIR 0 262 66 296 64 21 0 chr18 39225488 39225535 -46763399 + (TA)n Simple_repeat Simple_repeat 1 48 0 207 0 0 0 chr18 39226105 39226128 -46762806 + (CAAAT)n Simple_repeat Simple_repeat 2 24 0 292 276 26 62 chr18 39227231 39227365 -46761569 - MIR SINE MIR -76 132 51 180 390 63 0 chr18 39227445 39227540 -46761394 - L2 LINE L2 -9 3304 3204 831 200 24 0 chr18 39227682 39227847 -46761087 + MER105 DNA DNA 5 173 -31 520 290 119 42 chr18 39228444 39228690 -46760244 - HAL1 LINE L1 -696 1811 1519 2393 87 0 0 chr18 39228690 39228989 -46759945 - AluY SINE Alu -12 299 1 520 290 119 42 chr18 39228989 39229152 -46759782 - HAL1 LINE L1 -988 1519 1370 199 119 56 32 chr18 39229207 39229333 -46759601 + (TA)n Simple_repeat Simple_repeat 2 130 0 202 229 9 67 chr18 39229550 39229655 -46759279 + T-rich Low_complexity Low_complexity 1 99 0 430 95 32 0 chr18 39230191 39230254 -46758680 + Alu SINE Alu 226 290 -22 417 323 78 88 chr18 39230644 39231444 -46757490 + HAL1 LINE L1 963 1754 -753 271 305 19 0 chr18 39232138 39232243 -46756691 - MER103 DNA DNA -14 152 46 23 0 0 0 chr18 39232511 39232534 -46756400 + AT_rich Low_complexity Low_complexity 1 23 0 1108 150 122 20 chr18 39232851 39233097 -46755837 - THE1C LTR MaLR 0 375 105 180 125 0 0 chr18 39234879 39234911 -46754023 + (TG)n Simple_repeat Simple_repeat 2 33 0 182 290 16 16 chr18 39234936 39234998 -46753936 - L2 LINE L2 -87 3226 3165 220 379 76 38 chr18 39235065 39235517 -46753417 - L2 LINE L2 -223 3049 2568 315 0 0 0 chr18 39235777 39235812 -46753122 + (CA)n Simple_repeat Simple_repeat 2 36 0 214 263 18 0 chr18 39235822 39235879 -46753055 + CT-rich Low_complexity Low_complexity 1 58 0 867 333 109 51 chr18 39236651 39237955 -46750979 - L2 LINE L2 -1 3312 1933 605 259 53 5 chr18 39238508 39238697 -46750237 + MIR SINE MIR 60 257 -5 201 314 0 0 chr18 39239367 39239418 -46749516 + CT-rich Low_complexity Low_complexity 5 55 0 25 83 0 0 chr18 39239977 39240037 -46748897 + AT_rich Low_complexity Low_complexity 1 60 0 233 344 21 0 chr18 39240107 39240203 -46748731 - MIR SINE MIR -107 155 58 1970 175 8 3 chr18 39240766 39241120 -46747814 - MER4D LTR ERV1 0 903 548 1292 219 163 77 chr18 39241122 39241630 -46747304 - MLT2B3 LTR ERVL 0 554 3 2348 149 52 75 chr18 39241630 39241653 -46747281 - MER4D LTR ERV1 -351 552 530 543 31 0 0 chr18 39241653 39241718 -46747216 + (TTTC)n Simple_repeat Simple_repeat 3 67 0 2111 106 0 0 chr18 39241721 39241995 -46746939 - AluY SINE Alu -37 274 1 2348 149 52 75 chr18 39241995 39242530 -46746404 - MER4D LTR ERV1 -375 528 3 2181 127 0 3 chr18 39242720 39243028 -46745906 - AluSx SINE Alu -5 307 1 1109 220 93 95 chr18 39243069 39243563 -46745371 + LTR48B LTR ERV1 1 495 -149 2013 155 7 7 chr18 39243563 39243873 -46745061 - AluSx SINE Alu 0 312 3 1109 220 93 95 chr18 39243873 39244023 -46744911 + LTR48B LTR ERV1 495 644 0 541 341 57 9 chr18 39244135 39244364 -46744570 + LTR16A LTR ERVL 106 345 -105 382 335 38 59 chr18 39244410 39244700 -46744234 + ERVL LTR ERVL 4410 4693 -1071 233 247 13 52 chr18 39245282 39245359 -46743575 + LTR16A LTR ERVL 17 90 -360 1794 141 63 41 chr18 39245360 39245722 -46743212 + THE1C LTR MaLR 1 370 -5 544 281 67 6 chr18 39245802 39245966 -46742968 + MER5A DNA MER1_type 10 183 -6 227 266 89 25 chr18 39246247 39246326 -46742608 - Charlie7 DNA MER1_type -2527 85 2 208 197 14 14 chr18 39246786 39246857 -46742077 + (TA)n Simple_repeat Simple_repeat 1 71 0 416 254 46 56 chr18 39248330 39248527 -46740407 + L1MEd LINE L1 861 1055 -5064 13742 164 18 21 chr18 39248545 39249190 -46739744 + L1M1 LINE L1 2207 2852 -4713 5528 133 17 2 chr18 39249190 39250467 -46738467 - L1PA15 LINE L1 0 6165 4876 13742 164 18 21 chr18 39250467 39254170 -46734764 + L1M1 LINE L1 2852 6543 -1022 6859 157 48 7 chr18 39254337 39255551 -46733383 + Tigger1 DNA MER2_type 1 1264 -1154 5026 75 6 23 chr18 39255556 39256429 -46732505 - L1PA7 LINE L1 -17 6146 5328 * 9105 83 4 2 chr18 39256420 39257678 -46731256 + L1P LINE L1 4028 5287 -859 5861 155 82 24 chr18 39257678 39258031 -46730903 + Tigger1 DNA MER2_type 1238 1569 -849 2042 158 0 0 chr18 39258031 39258341 -46730593 - AluSx SINE Alu -2 310 1 5861 155 82 24 chr18 39258341 39259103 -46729831 + Tigger1 DNA MER2_type 1569 2418 0 281 237 89 104 chr18 39259149 39259284 -46729650 - MLT1J2 LTR MaLR -205 245 113 426 286 109 20 chr18 39260214 39260454 -46728480 - LTR33A LTR ERVL -6 517 258 396 321 131 39 chr18 39261194 39261554 -46727380 - MLT1J1 LTR MaLR 0 446 66 3807 267 71 20 chr18 39262226 39264887 -46724047 + L1ME1 LINE L1 3328 6130 -36 256 308 71 16 chr18 39264984 39265237 -46723697 + L1M4 LINE L1 2697 2963 -3183 347 303 30 38 chr18 39265328 39265695 -46723239 + L1M4 LINE L1 3151 3514 -2632 196 319 103 26 chr18 39265838 39265954 -46722980 + MIR3 SINE MIR 6 130 -78 448 298 54 42 chr18 39267276 39267444 -46721490 - MIR SINE MIR -57 205 36 331 302 52 83 chr18 39268343 39268535 -46720399 + MIR SINE MIR 51 236 -26 1084 261 49 39 chr18 39270081 39270491 -46718443 - MLT1C LTR MaLR -2 465 52 250 336 45 48 chr18 39270738 39271030 -46717904 - L3b LINE CR1 -181 1402 1112 220 282 221 41 chr18 39271285 39271480 -46717454 - MIR SINE MIR 0 262 33 254 349 28 0 chr18 39272049 39272155 -46716779 + MER5A DNA MER1_type 37 145 -44 277 270 120 10 chr18 39273849 39273949 -46714985 + MLT1K LTR MaLR 132 242 -346 800 241 11 11 chr18 39275049 39275236 -46713698 - MER5A DNA MER1_type 0 189 3 638 318 64 40 chr18 39275438 39275765 -46713169 - L3 LINE CR1 -112 1465 1131 1889 141 59 31 chr18 39275896 39276250 -46712684 - THE1B LTR MaLR 0 364 1 11432 101 8 0 chr18 39276255 39277816 -46711118 - THE1B-int LTR MaLR -6 1574 1 2160 130 48 20 chr18 39277816 39278170 -46710764 - THE1B LTR MaLR 0 364 1 852 209 62 126 chr18 39278170 39278564 -46710370 + MLT1D LTR MaLR 20 389 -1 443 319 107 9 chr18 39278842 39279058 -46709876 + L3 LINE CR1 341 577 -1000 606 285 127 4 chr18 39279520 39279748 -46709186 - MIR SINE MIR -5 257 2 511 363 124 32 chr18 39279837 39280311 -46708623 + L3 LINE CR1 1059 1576 -1 549 198 90 9 chr18 39281281 39281392 -46707542 + FLAM_C SINE Alu 3 122 -21 484 254 0 46 chr18 39281527 39281657 -46707277 + FLAM_A SINE Alu 2 125 -8 5274 136 14 14 chr18 39282536 39283441 -46705493 + L1PA16 LINE L1 5260 6164 -2 756 258 146 70 chr18 39284497 39286100 -46702834 - L1ME3 LINE L1 -226 5936 4205 284 120 20 0 chr18 39286147 39286197 -46702737 + (TCTA)n Simple_repeat Simple_repeat 3 53 0 234 300 42 42 chr18 39286203 39286323 -46702611 - L1ME3 LINE L1 -1986 4160 4041 2170 118 3 0 chr18 39286440 39286736 -46702198 - AluSx SINE Alu -15 297 1 233 225 211 0 chr18 39286768 39286839 -46702095 + MIR3 SINE MIR 120 205 -3 432 184 13 0 chr18 39287988 39288064 -46700870 + MIR SINE MIR 170 246 -16 195 69 0 0 chr18 39288687 39288716 -46700218 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 324 278 9 28 chr18 39288796 39288904 -46700030 - LTR16A1 LTR ERVL -304 153 48 1002 201 48 5 chr18 39289514 39289703 -46699231 + MLT1A1 LTR MaLR 169 365 0 797 322 66 11 chr18 39289722 39290159 -46698775 - HERV16 LTR ERVL -1925 3071 2667 491 346 39 21 chr18 39290243 39290523 -46698411 - HERV16 LTR ERVL -3462 1534 1250 444 327 80 35 chr18 39291328 39291667 -46697267 - HERV16 LTR ERVL -4642 354 1 1039 240 50 68 chr18 39291667 39292050 -46696884 - LTR16A1 LTR ERVL 0 457 82 265 259 17 0 chr18 39292365 39292423 -46696511 - L2 LINE L2 -5 3308 3250 282 29 0 0 chr18 39293015 39293050 -46695884 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1679 249 47 29 chr18 39294475 39295053 -46693881 + L1ME3 LINE L1 5484 6071 -91 284 286 151 54 chr18 39296134 39296393 -46692541 - L2 LINE L2 -2 3311 3028 543 31 0 0 chr18 39296580 39296645 -46692289 + (TC)n Simple_repeat Simple_repeat 2 66 0 2182 87 3 3 chr18 39296652 39296938 -46691996 - AluY SINE Alu -25 286 1 230 167 74 0 chr18 39296947 39297001 -46691933 - L1ME3 LINE L1 -2 6160 6103 362 172 516 0 chr18 39297318 39297440 -46691494 + MER5A DNA MER1_type 1 185 -4 21 57 0 0 chr18 39297679 39297714 -46691220 + AT_rich Low_complexity Low_complexity 1 35 0 618 316 128 40 chr18 39298546 39298747 -46690187 - L2 LINE L2 -1659 1655 1473 825 209 170 10 chr18 39298747 39298953 -46689981 + MER8 DNA MER2_type 1 239 0 618 316 128 40 chr18 39298953 39299610 -46689324 - L2 LINE L2 -1841 1473 721 595 294 12 0 chr18 39300364 39300527 -46688407 + MIR3 SINE MIR 30 194 -14 272 335 110 30 chr18 39301123 39301287 -46687647 + MIR3 SINE MIR 4 180 -28 4153 158 45 16 chr18 39301417 39302177 -46686757 - Tigger1 DNA MER2_type -1636 782 1 398 299 27 0 chr18 39303240 39303387 -46685547 + (TA)n Simple_repeat Simple_repeat 2 152 0 1981 175 20 6 chr18 39303629 39303983 -46684951 + MLT1A1 LTR MaLR 7 365 0 2051 134 0 10 chr18 39304202 39304508 -46684426 + AluSg SINE Alu 1 303 -7 1327 223 44 9 chr18 39304867 39305186 -46683748 - MER63 DNA MER1_type -300 761 432 1577 181 25 44 chr18 39305208 39305529 -46683405 + MER58B DNA MER1_type 14 328 -13 207 0 0 0 chr18 39306803 39306826 -46682108 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 308 271 40 45 chr18 39306862 39307039 -46681895 - LTR16C LTR ERVL 0 491 316 222 284 79 0 chr18 39307418 39307500 -46681434 - MIR SINE MIR -62 146 69 230 286 35 85 chr18 39307895 39308094 -46680840 - L2 LINE L2 -2 3311 3123 225 0 0 0 chr18 39308385 39308410 -46680524 + (A)n Simple_repeat Simple_repeat 1 25 0 434 339 0 0 chr18 39310978 39311105 -46677829 + MIR SINE MIR 8 134 -128 707 214 107 11 chr18 39311149 39311336 -46677598 - MIR SINE MIR -24 238 34 190 103 0 0 chr18 39311896 39311925 -46677009 + L2 LINE L2 3285 3313 0 360 298 101 47 chr18 39312200 39312485 -46676449 + MER102a DNA MER1_type 29 328 -2 279 330 0 19 chr18 39312718 39312821 -46676113 + L3 LINE CR1 1039 1139 -438 349 289 65 70 chr18 39313713 39314150 -46674784 + L1ME1 LINE L1 27 411 -5634 1180 211 17 0 chr18 39314527 39314759 -46674175 + AluJb SINE Alu 1 236 -76 516 260 33 12 chr18 39314766 39314995 -46673939 - L1MCa LINE L1 -4460 1966 1771 2133 91 11 0 chr18 39315012 39315286 -46673648 + AluSc SINE Alu 1 277 -32 183 42 0 0 chr18 39315286 39315310 -46673624 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 330 136 0 0 chr18 39315325 39315369 -46673565 - Alu SINE Alu -23 279 236 6777 246 61 51 chr18 39315371 39316845 -46672089 + L1ME1 LINE L1 2238 3696 -2868 2451 57 0 3 chr18 39316845 39317141 -46671793 - AluY SINE Alu -16 295 1 6777 246 61 51 chr18 39317141 39319118 -46669816 + L1ME1 LINE L1 3696 5789 -775 2197 228 66 31 chr18 39319134 39319813 -46669121 + L1ME1 LINE L1 5835 6537 -47 483 248 8 0 chr18 39319722 39319847 -46669087 + L1MA10 LINE L1 6606 6731 -21 * 2526 183 15 47 chr18 39320270 39320805 -46668129 + LTR26B LTR ERV1 7 524 -7 219 215 0 0 chr18 39320892 39320957 -46667977 + (TAA)n Simple_repeat Simple_repeat 3 67 0 282 254 149 15 chr18 39320967 39321101 -46667833 - MIR SINE MIR -35 227 76 554 327 66 52 chr18 39321183 39321590 -46667344 - LTR33 LTR ERVL -67 454 42 1110 161 36 0 chr18 39322245 39322438 -46666496 - MLT1A1 LTR MaLR -25 340 141 2254 334 36 32 chr18 39322553 39323676 -46665258 - ERVL LTR ERVL -1051 4713 3586 22 35 0 0 chr18 39324165 39324194 -46664740 + AT_rich Low_complexity Low_complexity 1 29 0 289 294 62 55 chr18 39325704 39325850 -46663084 + MIR SINE MIR 96 242 -20 218 250 43 141 chr18 39327716 39327808 -46661126 + L2 LINE L2 3231 3313 0 276 293 162 10 chr18 39328028 39328127 -46660807 + L2 LINE L2 3200 3313 0 25 95 0 0 chr18 39329012 39329086 -46659848 + AT_rich Low_complexity Low_complexity 1 74 0 1640 184 16 13 chr18 39329151 39329455 -46659479 + AluJo SINE Alu 1 305 -7 393 313 91 62 chr18 39329577 39329983 -46658951 + HAL1 LINE L1 537 954 -1553 322 259 122 37 chr18 39330059 39330248 -46658686 + HAL1 LINE L1 1588 1792 -715 25 31 0 0 chr18 39330314 39330346 -46658588 + AT_rich Low_complexity Low_complexity 1 32 0 308 236 85 19 chr18 39330394 39330500 -46658434 + L1ME3 LINE L1 50 162 -5908 348 286 90 45 chr18 39330621 39330911 -46658023 + L1ME3 LINE L1 320 622 -5448 415 299 64 24 chr18 39330938 39331240 -46657694 + L1ME3 LINE L1 725 998 -5072 1994 231 55 83 chr18 39331263 39332377 -46656557 + L1M4 LINE L1 4074 5156 -990 11186 129 17 23 chr18 39332419 39334278 -46654656 + L1P3 LINE L1 6 1861 -4600 6050 80 0 0 chr18 39334320 39335083 -46653851 + HERVL-A1 LTR ERVL 3003 3765 -1889 5025 73 15 6 chr18 39335087 39335757 -46653177 + HERVL-A1 LTR ERVL 4979 5654 0 3265 91 2 7 chr18 39335757 39336195 -46652739 + MLT2A1 LTR ERVL 1 436 -8 195 42 0 0 chr18 39336782 39336806 -46652128 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 224 132 94 0 chr18 39337820 39337873 -46651061 + (CAAA)n Simple_repeat Simple_repeat 1 58 0 201 162 0 0 chr18 39338277 39338314 -46650620 + T-rich Low_complexity Low_complexity 1 37 0 415 233 0 45 chr18 39338735 39338868 -46650066 - L1ME1 LINE L1 -3 6163 6037 837 239 14 55 chr18 39338871 39339160 -46649774 - L1ME1 LINE L1 -181 5983 5707 756 257 117 112 chr18 39339157 39339830 -46649104 + L1ME3 LINE L1 2943 3612 -2484 * 666 92 0 0 chr18 39339830 39339940 -46648994 + AluSg/x SINE Alu 199 308 0 756 257 117 112 chr18 39339940 39340136 -46648798 + L1ME3 LINE L1 3612 3806 -2290 2440 84 0 0 chr18 39340136 39340435 -46648499 + AluY SINE Alu 1 299 -12 756 257 117 112 chr18 39340435 39342378 -46646556 + L1ME3 LINE L1 3806 5870 -226 5146 141 13 18 chr18 39343445 39344354 -46644580 - L1PA16 LINE L1 -2 6164 5260 21 0 0 0 chr18 39344497 39344518 -46644416 + AT_rich Low_complexity Low_complexity 1 21 0 474 256 0 47 chr18 39345234 39345363 -46643571 - FLAM_A SINE Alu -9 124 2 549 198 90 9 chr18 39345498 39345609 -46643325 - FLAM_C SINE Alu -21 122 3 513 363 124 32 chr18 39346579 39347053 -46641881 - L3 LINE CR1 -1 1576 1059 606 285 127 4 chr18 39347142 39347370 -46641564 + MIR SINE MIR 2 257 -5 443 319 107 9 chr18 39347832 39348048 -46640886 - L3 LINE CR1 -1000 577 341 852 209 62 126 chr18 39348326 39348720 -46640214 - MLT1D LTR MaLR -1 389 20 2148 133 48 20 chr18 39348720 39349074 -46639860 + THE1B LTR MaLR 1 364 0 11443 101 8 0 chr18 39349074 39350635 -46638299 + THE1B-int LTR MaLR 1 1574 -6 1882 141 59 31 chr18 39350640 39350994 -46637940 + THE1B LTR MaLR 1 364 0 618 322 61 43 chr18 39351125 39351454 -46637480 + L3 LINE CR1 1131 1465 -112 775 246 11 11 chr18 39351656 39351843 -46637091 + MER5A DNA MER1_type 3 189 0 277 270 120 10 chr18 39352942 39353042 -46635892 - MLT1K LTR MaLR -346 242 132 460 303 33 13 chr18 39354427 39354579 -46634355 + MIR3 SINE MIR 4 158 -50 259 139 56 19 chr18 39354809 39354917 -46634017 + (TA)n Simple_repeat Simple_repeat 1 112 0 475 273 8 8 chr18 39355191 39355312 -46633622 + L2 LINE L2 3189 3309 -4 493 304 61 0 chr18 39356408 39356589 -46632345 + MIR SINE MIR 19 210 -52 32 43 0 0 chr18 39356837 39356883 -46632051 + AT_rich Low_complexity Low_complexity 1 46 0 306 211 40 0 chr18 39357246 39357322 -46631612 - MER53 DNA DNA 0 189 111 238 208 97 0 chr18 39357258 39357330 -46631604 + MER53 DNA DNA 23 101 -88 * 25 0 0 0 chr18 39357366 39357391 -46631543 + AT_rich Low_complexity Low_complexity 1 25 0 1972 146 0 0 chr18 39357391 39357679 -46631255 - AluSx SINE Alu -24 288 1 432 182 91 27 chr18 39357687 39357797 -46631137 - MER53 DNA DNA -63 126 10 379 273 108 45 chr18 39358434 39358851 -46630083 + L1ME LINE L1 5254 5595 -526 270 0 0 0 chr18 39359141 39359171 -46629763 + (CA)n Simple_repeat Simple_repeat 2 31 0 1523 180 71 7 chr18 39360046 39360340 -46628594 - MER7A DNA MER2_type -5 341 31 1020 209 29 59 chr18 39360502 39360809 -46628125 + MLT1A1 LTR MaLR 18 315 -50 277 258 38 82 chr18 39362653 39362812 -46626122 - MIR3 SINE MIR -4 204 53 313 300 100 8 chr18 39362836 39362956 -46625978 + MIR3 SINE MIR 29 159 -49 189 0 0 0 chr18 39363811 39363832 -46625102 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1465 194 45 11 chr18 39363836 39364104 -46624830 - AluJo SINE Alu -30 282 6 1917 93 107 4 chr18 39364814 39365084 -46623850 - AluY SINE Alu -15 296 1 229 226 23 35 chr18 39365693 39365825 -46623109 - MIR SINE MIR -34 228 34 2326 83 3 10 chr18 39366289 39366589 -46622345 - AluY SINE Alu -13 298 1 207 245 10 20 chr18 39368378 39368463 -46620471 + GA-rich Low_complexity Low_complexity 1 86 -15 4711 124 24 29 chr18 39368463 39369246 -46619688 - MER4E LTR ERV1 0 779 1 207 245 10 20 chr18 39369246 39369262 -46619672 + GA-rich Low_complexity Low_complexity 86 101 0 265 258 39 70 chr18 39370186 39370314 -46618620 + MIR3 SINE MIR 65 188 -20 204 211 0 0 chr18 39370965 39371003 -46617931 + GA-rich Low_complexity Low_complexity 3 40 0 609 285 155 7 chr18 39371094 39371371 -46617563 + L2 LINE L2 2996 3313 0 5956 29 1 0 chr18 39371555 39372331 -46616603 + L1P1 LINE L1 4692 5468 -687 1211 242 20 0 chr18 39372328 39372621 -46616313 - L1 LINE L1 -3397 2749 2451 * 7628 65 12 11 chr18 39372773 39373810 -46615124 + L1P LINE L1 1094 2131 -4015 578 102 23 0 chr18 39373911 39373999 -46614935 - AluS SINE Alu -219 94 5 2804 124 39 26 chr18 39375207 39375839 -46613095 + LTR8A LTR ERV1 1 727 0 563 168 9 47 chr18 39376051 39376158 -46612776 + LTR9 LTR ERV1 1 103 -509 628 157 17 0 chr18 39376274 39376389 -46612545 + MER41B LTR ERV1 2 118 -517 * 1343 154 23 5 chr18 39376387 39376608 -46612326 + MER41B LTR ERV1 411 635 0 359 187 67 0 chr18 39376608 39376678 -46612256 - MER39 LTR ERV1 -249 458 384 3425 122 31 66 chr18 39376679 39377287 -46611647 + LTR59 LTR ERV1 1 587 -10 3625 169 16 70 chr18 39427531 39428350 -46560584 + L1PB3 LINE L1 5378 6152 -2 186 344 123 0 chr18 39428712 39428875 -46560059 + L2 LINE L2 2371 2553 -761 297 260 115 10 chr18 39430103 39430199 -46558735 - Charlie4 DNA MER1_type -31 1930 1825 227 326 23 0 chr18 39431833 39431919 -46557015 + (TATG)n Simple_repeat Simple_repeat 4 91 0 285 207 0 0 chr18 39432441 39432499 -46556435 + L1MA9 LINE L1 6254 6311 -1 259 136 15 76 chr18 39432593 39432659 -46556275 + L1MA10 LINE L1 6259 6320 -14 232 365 57 25 chr18 39432803 39432962 -46555972 - L2 LINE L2 -206 3066 2903 3127 75 42 5 chr18 39433017 39433445 -46555489 + MLT2A1 LTR ERVL 1 444 0 226 186 0 17 chr18 39435061 39435120 -46553814 - L1MC3 LINE L1 -15 7770 7713 581 200 21 14 chr18 39435122 39435262 -46553672 - L1 LINE L1 -1022 5124 4984 7971 221 69 15 chr18 39435307 39437330 -46551604 - L1MC3 LINE L1 -206 7579 5447 4620 174 21 5 chr18 39437430 39438405 -46550529 - L1P4 LINE L1 -374 5791 4787 2115 154 11 24 chr18 39438405 39438774 -46550160 + THE1B LTR MaLR 1 364 0 4620 174 21 5 chr18 39438774 39439252 -46549682 - L1P4 LINE L1 -1378 4787 4318 515 161 11 11 chr18 39439274 39439367 -46549567 - THE1B LTR MaLR 0 364 272 4487 158 13 30 chr18 39439384 39440252 -46548682 + L1PA16 LINE L1 5305 6157 -9 575 292 56 16 chr18 39440268 39440590 -46548344 - L1MCa LINE L1 -2883 3543 3209 21 0 0 0 chr18 39440787 39440808 -46548126 + AT_rich Low_complexity Low_complexity 1 21 0 326 297 153 45 chr18 39442498 39442700 -46546234 + MIR SINE MIR 31 254 -8 372 43 0 0 chr18 39442700 39442746 -46546188 + (TTA)n Simple_repeat Simple_repeat 3 48 0 581 319 98 25 chr18 39442875 39443282 -46545652 + MLT1L LTR MaLR 179 615 0 24 0 0 0 chr18 39443282 39443306 -46545628 + AT_rich Low_complexity Low_complexity 1 24 0 205 176 0 0 chr18 39445148 39445182 -46543752 + T-rich Low_complexity Low_complexity 5 38 0 33 56 0 0 chr18 39445436 39445490 -46543444 + AT_rich Low_complexity Low_complexity 1 54 0 357 333 9 9 chr18 39445580 39445688 -46543246 + MIR SINE MIR 39 146 -62 182 260 110 27 chr18 39445713 39445786 -46543148 - MIR3 SINE MIR -4 204 126 33 56 0 0 chr18 39446149 39446203 -46542731 + AT_rich Low_complexity Low_complexity 1 54 0 373 315 9 9 chr18 39446293 39446401 -46542533 + MIR SINE MIR 39 146 -62 215 233 110 27 chr18 39446426 39446499 -46542435 - MIR3 SINE MIR -4 204 126 346 322 14 20 chr18 39446961 39447107 -46541827 + MIR SINE MIR 117 261 -1 2019 287 47 22 chr18 39447254 39448070 -46540864 - L1MEc LINE L1 -5525 871 36 2188 72 3 75 chr18 39448283 39448616 -46540318 - AluY SINE Alu 0 311 3 35 0 0 0 chr18 39449138 39449173 -46539761 + AT_rich Low_complexity Low_complexity 1 35 0 541 241 149 0 chr18 39451168 39451417 -46537517 - L1MCa LINE L1 -3951 2475 2190 238 214 0 48 chr18 39451413 39451497 -46537437 - L1MC4 LINE L1 -1355 6687 6608 * 180 152 0 0 chr18 39451497 39451530 -46537404 + GA-rich Low_complexity Low_complexity 1 33 0 1464 201 4 18 chr18 39451534 39451808 -46537126 - AluJo SINE Alu -39 273 4 339 260 31 8 chr18 39451820 39451947 -46536987 - L1MCa LINE L1 -4239 2187 2058 1092 79 0 0 chr18 39452000 39452139 -46536795 - AluY SINE Alu -30 281 143 647 236 58 5 chr18 39452149 39452340 -46536594 - L1MCa LINE L1 -4431 1995 1795 672 284 58 25 chr18 39452434 39452867 -46536067 + L1MDb LINE L1 894 1340 -5069 3094 275 50 37 chr18 39452927 39453668 -46535266 + L1MDb LINE L1 2578 3308 -3098 2260 75 0 0 chr18 39453668 39453949 -46534985 + AluY SINE Alu 3 283 -28 197 33 33 0 chr18 39453952 39453982 -46534952 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3094 275 50 37 chr18 39453982 39455120 -46533814 + L1MDb LINE L1 3309 4513 -1893 689 232 114 41 chr18 39455143 39455444 -46533490 + L1ME1 LINE L1 5834 6145 -21 24 53 0 0 chr18 39455629 39455667 -46533267 + AT_rich Low_complexity Low_complexity 1 38 0 427 356 112 31 chr18 39455715 39456133 -46532801 + HAL1b LINE L1 283 734 -614 30 0 0 0 chr18 39456410 39456440 -46532494 + AT_rich Low_complexity Low_complexity 1 30 0 208 115 16 66 chr18 39456479 39456540 -46532394 + (TA)n Simple_repeat Simple_repeat 2 59 0 1858 235 41 73 chr18 39456541 39457269 -46531665 + L1MC5 LINE L1 6665 7369 -592 22 0 0 0 chr18 39457565 39457587 -46531347 + AT_rich Low_complexity Low_complexity 1 22 0 311 314 112 50 chr18 39457730 39457972 -46530962 - MIR SINE MIR -2 260 4 1778 187 40 16 chr18 39459249 39459628 -46529306 + MLT1B LTR MaLR 3 390 0 21 0 0 0 chr18 39459631 39459652 -46529282 + AT_rich Low_complexity Low_complexity 1 21 0 246 268 37 0 chr18 39460153 39460235 -46528699 - MLT1L LTR MaLR -23 592 508 22 0 0 0 chr18 39460552 39460574 -46528360 + AT_rich Low_complexity Low_complexity 1 22 0 270 0 0 0 chr18 39460679 39460709 -46528225 + (CA)n Simple_repeat Simple_repeat 2 31 0 2492 230 102 21 chr18 39461464 39462324 -46526610 - MER63C DNA MER1_type 0 930 1 282 290 10 60 chr18 39462529 39462629 -46526305 - MIR SINE MIR -115 147 53 3123 176 45 18 chr18 39462802 39463428 -46525506 + LTR48B LTR ERV1 2 644 0 203 377 24 40 chr18 39464577 39464752 -46524182 + MIR SINE MIR 40 214 -48 36 0 0 0 chr18 39464769 39464805 -46524129 + AT_rich Low_complexity Low_complexity 1 36 0 276 321 143 0 chr18 39465228 39465340 -46523594 + MIR SINE MIR 2 129 -133 331 322 55 35 chr18 39465343 39465545 -46523389 - L1MDa LINE L1 -4712 1828 1623 214 194 28 0 chr18 39465596 39465668 -46523266 + (TAGA)n Simple_repeat Simple_repeat 4 77 0 198 269 119 0 chr18 39466461 39466528 -46522406 + L2 LINE L2 2686 2760 -554 637 286 6 12 chr18 39466727 39466895 -46522039 - MER76 LTR ERV -59 629 463 268 274 51 17 chr18 39467159 39467276 -46521658 + MIR SINE MIR 30 150 -58 212 189 75 19 chr18 39467616 39467722 -46521212 + (TA)n Simple_repeat Simple_repeat 1 112 0 3334 163 109 23 chr18 39469270 39470001 -46518933 - LTR25 LTR ERV1 0 794 1 434 321 79 14 chr18 39470368 39470583 -46518351 + MIR SINE MIR 34 262 0 22 35 0 0 chr18 39471398 39471427 -46517507 + AT_rich Low_complexity Low_complexity 1 29 0 831 268 49 0 chr18 39472121 39472326 -46516608 - MER20 DNA MER1_type -4 215 1 201 333 0 45 chr18 39472360 39472492 -46516442 + A-rich Low_complexity Low_complexity 3 128 0 * 208 265 0 29 chr18 39472428 39472496 -46516438 + GA-rich Low_complexity Low_complexity 2 67 0 24 32 0 0 chr18 39472833 39472864 -46516070 + AT_rich Low_complexity Low_complexity 1 31 0 38 39 0 0 chr18 39474035 39474087 -46514847 + AT_rich Low_complexity Low_complexity 1 52 0 215 161 0 16 chr18 39475254 39475316 -46513618 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 23 68 0 0 chr18 39477761 39477805 -46511129 + AT_rich Low_complexity Low_complexity 1 44 0 187 232 61 85 chr18 39479303 39479385 -46509549 - L2 LINE L2 -1034 2280 2201 291 54 0 0 chr18 39479415 39479452 -46509482 + (CA)n Simple_repeat Simple_repeat 2 38 0 204 308 98 56 chr18 39480306 39480417 -46508517 - MER5B DNA MER1_type -29 149 29 16249 142 17 11 chr18 39480417 39482480 -46506454 - Tigger4(Zombi) DNA MER2_type 0 2731 649 1764 130 101 0 chr18 39482480 39482757 -46506177 - AluSp SINE Alu -8 305 1 16249 142 17 11 chr18 39482757 39483410 -46505524 - Tigger4(Zombi) DNA MER2_type -2082 649 1 204 308 98 56 chr18 39483410 39483441 -46505493 - MER5B DNA MER1_type -149 29 1 259 241 184 11 chr18 39484159 39484246 -46504688 + MER5B DNA MER1_type 1 102 -76 182 256 0 0 chr18 39484229 39484272 -46504662 + MER5A DNA MER1_type 63 105 -84 * 590 175 4 209 chr18 39484347 39484532 -46504402 - MER5A DNA MER1_type -1 188 -33 1968 199 41 21 chr18 39484532 39484950 -46503984 + MSTB LTR MaLR 1 426 0 8486 201 12 5 chr18 39484950 39486590 -46502344 + MSTB-int LTR MaLR 1 1651 0 2243 182 16 16 chr18 39486592 39487016 -46501918 + MSTB LTR MaLR 3 426 0 590 175 4 209 chr18 39487016 39487060 -46501874 - MER5A DNA MER1_type -135 54 3 396 350 16 0 chr18 39487102 39487225 -46501709 - MER5B DNA MER1_type -52 126 2 2444 221 9 13 chr18 39487257 39487805 -46501129 - L1MB5 LINE L1 -8 6166 5621 838 256 81 9 chr18 39487806 39488029 -46500905 - MSTD LTR MaLR -2 394 156 270 138 12 50 chr18 39488138 39488218 -46500716 + (TA)n Simple_repeat Simple_repeat 2 78 0 502 260 0 0 chr18 39488238 39488338 -46500596 - FRAM SINE Alu -30 146 47 389 174 0 98 chr18 39488338 39488430 -46500504 - MSTD LTR MaLR -313 83 1 4102 232 43 40 chr18 39488433 39488692 -46500242 - L1MB5 LINE L1 -551 5623 5366 1767 205 11 0 chr18 39488692 39489053 -46499881 + MER47A DNA MER2_type 1 365 -1 4102 232 43 40 chr18 39489053 39490423 -46498511 - L1MB5 LINE L1 -808 5366 3982 1011 196 96 4 chr18 39490430 39490670 -46498264 + MER58B DNA MER1_type 79 340 -1 196 302 73 0 chr18 39491150 39491246 -46497688 + MIR SINE MIR 134 236 -26 183 266 101 58 chr18 39491934 39492073 -46496861 - L2 LINE L2 -540 2774 2630 314 123 18 0 chr18 39492365 39492422 -46496512 + GA-rich Low_complexity Low_complexity 1 58 0 1902 184 101 9 chr18 39494296 39494880 -46494054 - L1M2 LINE L1 -752 5539 4900 312 197 0 0 chr18 39494874 39494935 -46493999 + L1M2 LINE L1 5520 5580 -711 * 392 281 0 0 chr18 39494935 39495017 -46493917 - Tigger7 DNA MER2_type 0 2487 2406 3011 164 14 4 chr18 39495022 39495521 -46493413 + Tigger3b DNA MER2_type 1 504 -727 7261 140 19 7 chr18 39495521 39496653 -46492281 + THE1C-int LTR MaLR 436 1580 0 2359 123 16 16 chr18 39496653 39497028 -46491906 + THE1C LTR MaLR 1 375 0 637 194 31 19 chr18 39497059 39497219 -46491715 + L1MA8 LINE L1 6130 6291 0 280 91 0 23 chr18 39497222 39497266 -46491668 - MADE1 DNA Mariner 0 80 38 293 116 0 0 chr18 39497444 39497487 -46491447 - MADE1 DNA Mariner 0 80 38 548 119 34 17 chr18 39497506 39497624 -46491310 + GA-rich Low_complexity Low_complexity 1 120 0 244 345 53 0 chr18 39498381 39498494 -46490440 + MIR3 SINE MIR 87 205 -3 2238 93 0 23 chr18 39499326 39499636 -46489298 - AluSc SINE Alu -6 303 1 194 291 0 0 chr18 39500925 39500980 -46487954 + MIR SINE MIR 72 126 -136 2603 43 0 3 chr18 39501037 39501340 -46487594 + AluY SINE Alu 1 302 -9 203 229 16 0 chr18 39502734 39502795 -46486139 + (TA)n Simple_repeat Simple_repeat 1 62 0 759 188 0 29 chr18 39502796 39502934 -46486000 + MER92B LTR ERV1 1 134 -502 244 246 0 16 chr18 39502935 39502996 -46485938 + (CATATA)n Simple_repeat Simple_repeat 4 63 0 302 304 76 27 chr18 39503137 39503361 -46485573 - HAL1b LINE L1 -161 1187 953 2835 139 4 2 chr18 39503542 39504009 -46484925 - L1PB1 LINE L1 -8 6143 5676 1260 222 129 12 chr18 39504116 39504449 -46484485 + MSTD LTR MaLR 25 396 0 275 394 48 43 chr18 39507203 39507602 -46481332 + L2 LINE L2 2856 3256 -16 234 294 82 0 chr18 39508123 39508208 -46480726 + L2 LINE L2 2961 3052 -220 180 387 87 23 chr18 39508732 39508905 -46480029 - MIR3 SINE MIR -9 199 16 2052 124 0 10 chr18 39510751 39511086 -46477848 + AluSx SINE Alu 1 332 0 326 253 131 0 chr18 39511672 39511771 -46477163 - LTR16A LTR ERVL -6 444 333 1922 139 3 17 chr18 39511826 39512128 -46476806 - AluSq SINE Alu -15 298 1 183 188 0 0 chr18 39512887 39512935 -46475999 + (CA)n Simple_repeat Simple_repeat 2 49 0 334 251 115 81 chr18 39513008 39513418 -46475516 - MLT1J1 LTR MaLR 0 450 1 330 26 0 0 chr18 39515610 39515649 -46473285 + (TA)n Simple_repeat Simple_repeat 1 39 0 2189 92 7 0 chr18 39518090 39518371 -46470563 - AluSq SINE Alu -30 283 1 269 195 26 26 chr18 39519010 39519087 -46469847 + (TATATG)n Simple_repeat Simple_repeat 3 79 0 335 169 14 0 chr18 39519299 39519370 -46469564 + (TGGA)n Simple_repeat Simple_repeat 1 72 0 524 305 9 49 chr18 39519589 39519812 -46469122 - MIR SINE MIR -30 232 19 321 309 86 29 chr18 39520428 39520567 -46468367 + MIR3 SINE MIR 31 177 -31 25 0 0 0 chr18 39521178 39521203 -46467731 + AT_rich Low_complexity Low_complexity 1 25 0 415 105 0 0 chr18 39521297 39521354 -46467580 - LTR10C LTR ERV1 -5 586 530 * 3419 43 2 0 chr18 39521353 39521767 -46467167 - LTR10C LTR ERV1 -176 415 1 2144 113 7 0 chr18 39521828 39522128 -46466806 - AluSc SINE Alu -7 302 1 698 268 83 7 chr18 39522261 39522537 -46466397 - MER33 DNA MER1_type 0 324 28 194 174 22 0 chr18 39522872 39522918 -46466016 + (CA)n Simple_repeat Simple_repeat 1 47 0 5265 104 37 24 chr18 39522923 39524027 -46464907 + pTR5 LTR ERV1 743 2020 -418 269 255 39 20 chr18 39524027 39524129 -46464805 + LTR30 LTR ERV1 539 642 -80 1270 99 104 5 chr18 39524132 39524333 -46464601 + pTR5 LTR ERV1 172 392 -2046 189 332 103 11 chr18 39524783 39524886 -46464048 - MIR SINE MIR -78 130 18 371 310 245 0 chr18 39525591 39525791 -46463143 + L3 LINE CR1 406 654 -923 664 206 41 24 chr18 39528285 39528455 -46460479 + MIR SINE MIR 84 256 -6 21 0 0 0 chr18 39529736 39529757 -46459177 + AT_rich Low_complexity Low_complexity 1 21 0 534 124 0 21 chr18 39530017 39530114 -46458820 - L1PA16 LINE L1 -1 6165 6071 447 327 146 28 chr18 39531348 39531602 -46457332 - L2 LINE L2 -32 3281 2998 979 264 103 73 chr18 39531702 39532002 -46456932 - LTR33 LTR ERVL 0 521 198 1013 184 72 132 chr18 39532002 39532389 -46456545 - MLT1A1 LTR MaLR 0 365 2 979 264 103 73 chr18 39532389 39532592 -46456342 - LTR33 LTR ERVL -323 198 3 1309 154 50 5 chr18 39534264 39534484 -46454450 + MER30 DNA MER1_type 1 230 0 23 0 0 0 chr18 39536105 39536128 -46452806 + AT_rich Low_complexity Low_complexity 1 23 0 278 311 14 0 chr18 39537093 39537167 -46451767 + GA-rich Low_complexity Low_complexity 2 76 0 389 266 135 48 chr18 39537734 39537941 -46450993 - MIR SINE MIR 0 262 38 189 365 94 10 chr18 39538916 39539012 -46449922 + MIR SINE MIR 32 135 -73 558 259 8 0 chr18 39539852 39539983 -46448951 - MER94 DNA DNA -1 133 2 447 19 0 0 chr18 39540242 39540294 -46448640 + (TA)n Simple_repeat Simple_repeat 1 52 0 294 356 61 65 chr18 39540321 39540796 -46448138 - L2 LINE L2 -37 3276 2804 24 0 0 0 chr18 39541089 39541113 -46447821 + AT_rich Low_complexity Low_complexity 1 24 0 334 267 59 64 chr18 39541989 39542176 -46446758 + MER5A DNA MER1_type 1 186 -3 1168 269 117 10 chr18 39542494 39542980 -46445954 - L1ME3A LINE L1 -4 6166 5629 25 31 0 0 chr18 39543191 39543223 -46445711 + AT_rich Low_complexity Low_complexity 1 32 0 505 309 54 71 chr18 39543746 39544113 -46444821 - L1ME3A LINE L1 -1259 4887 4532 1996 145 6 3 chr18 39544113 39544424 -46444510 + AluSx SINE Alu 1 312 0 505 309 54 71 chr18 39544424 39544616 -46444318 - L1ME3A LINE L1 -1614 4532 4338 1571 199 92 2 chr18 39544777 39545190 -46443744 - L1MD3 LINE L1 -1 7994 7545 279 186 34 0 chr18 39545197 39545256 -46443678 - L1MD3 LINE L1 -537 7458 7398 234 276 17 0 chr18 39545256 39545314 -46443620 - MLT1F1 LTR MaLR -449 118 60 1248 214 45 55 chr18 39545340 39545719 -46443215 - L1MD3 LINE L1 -878 7117 6743 254 168 42 21 chr18 39545773 39545868 -46443066 + (TA)n Simple_repeat Simple_repeat 2 98 0 24 32 0 0 chr18 39545881 39545912 -46443022 + AT_rich Low_complexity Low_complexity 1 31 0 417 198 0 0 chr18 39545949 39546045 -46442889 + (TA)n Simple_repeat Simple_repeat 1 96 0 2890 245 71 52 chr18 39546051 39546323 -46442611 - L1MC3 LINE L1 -766 5380 5115 378 61 0 0 chr18 39546323 39546372 -46442562 + (TG)n Simple_repeat Simple_repeat 2 50 0 2890 245 71 52 chr18 39546372 39548331 -46440603 - L1MC3 LINE L1 -1031 5115 4376 1839 140 40 55 chr18 39548336 39548498 -46440436 + THE1C LTR MaLR 1 164 -211 2124 116 10 0 chr18 39548498 39548792 -46440142 - AluSp SINE Alu -16 297 1 1839 140 40 55 chr18 39548792 39549008 -46439926 + THE1C LTR MaLR 164 373 -2 5745 121 52 10 chr18 39549010 39549904 -46439030 + THE1C-int LTR MaLR 1 931 -649 1094 171 5 0 chr18 39549917 39550110 -46438824 + L1PBa LINE L1 7 200 -6663 * 9645 171 44 3 chr18 39550098 39554296 -46434638 + L1PBa LINE L1 621 5098 -1764 250 303 46 20 chr18 39554296 39554448 -46434486 - L1MCa LINE L1 -5197 1229 1074 8639 206 16 1 chr18 39554548 39556819 -46432115 - L1P5 LINE L1 -486 5665 3370 343 271 21 62 chr18 39556862 39557006 -46431928 - HAL1b LINE L1 -697 651 514 329 307 140 9 chr18 39558426 39558645 -46430289 - L1MC/D LINE L1 -691 5479 5283 2097 96 79 0 chr18 39558769 39559049 -46429885 - AluSq SINE Alu -11 302 1 1277 224 30 8 chr18 39561243 39561506 -46427428 + AluJo SINE Alu 1 269 -43 198 344 62 31 chr18 39561606 39561702 -46427232 - MIR SINE MIR -77 131 33 277 273 11 34 chr18 39561784 39561872 -46427062 + MIR SINE MIR 46 131 -131 311 331 49 92 chr18 39561925 39562272 -46426662 - L2 LINE L2 -50 3222 2891 1033 307 79 31 chr18 39562571 39563190 -46425744 - HAL1 LINE L1 -757 1750 1102 291 256 105 75 chr18 39563269 39563402 -46425532 + L2 LINE L2 3177 3313 0 696 302 75 77 chr18 39563556 39564387 -46424547 - HAL1 LINE L1 -1653 854 26 393 363 30 18 chr18 39564945 39565113 -46423821 + MIR SINE MIR 13 182 -80 286 274 0 0 chr18 39565905 39565967 -46422967 - MIR SINE MIR -81 127 66 334 242 0 0 chr18 39566585 39566651 -46422283 + MIR SINE MIR 50 115 -93 201 132 0 0 chr18 39567352 39567390 -46421544 + (TG)n Simple_repeat Simple_repeat 1 38 0 482 271 15 23 chr18 39568007 39568140 -46420794 + L2 LINE L2 3181 3312 -1 864 205 87 2 chr18 39569622 39569913 -46419021 + MLT1A1 LTR MaLR 1 362 -3 236 290 52 94 chr18 39570792 39570925 -46418009 + MIR SINE MIR 6 128 -134 2006 110 7 32 chr18 39570925 39571235 -46417699 + AluSx SINE Alu 1 302 -10 236 290 52 94 chr18 39571235 39571317 -46417617 + MIR SINE MIR 128 212 -50 2580 292 86 24 chr18 39571353 39573711 -46415223 - L1ME1 LINE L1 -5 6397 3881 2312 259 59 43 chr18 39573779 39575842 -46413092 - L1ME1 LINE L1 -2755 3627 1545 722 266 53 11 chr18 39575867 39576130 -46412804 - L1MA9 LINE L1 -40 6272 5999 396 196 7 63 chr18 39576118 39576261 -46412673 - L1ME1 LINE L1 -4975 1409 1275 * 654 237 86 16 chr18 39676654 39676840 -46312094 + MIR SINE MIR 48 246 -16 290 348 59 21 chr18 39677609 39677796 -46311138 - MIR SINE MIR -56 206 13 1434 199 6 55 chr18 39677950 39678031 -46310903 - AluJo SINE Alu -2 310 227 3882 132 13 16 chr18 39678031 39678645 -46310289 - LTR9 LTR ERV1 0 612 1 1434 199 6 55 chr18 39678645 39678889 -46310045 - AluJo SINE Alu -85 227 1 297 268 99 28 chr18 39679028 39679170 -46309764 + MER104 DNA Tc2 24 175 -5 1862 171 10 0 chr18 39681069 39681361 -46307573 + AluSx SINE Alu 1 295 -17 273 57 0 0 chr18 39682186 39682221 -46306713 + (TG)n Simple_repeat Simple_repeat 1 35 0 23 0 0 0 chr18 39682247 39682270 -46306664 + AT_rich Low_complexity Low_complexity 1 23 0 1739 108 33 4 chr18 39682580 39682820 -46306114 + AluSx SINE Alu 1 247 -65 204 98 66 49 chr18 39683056 39683117 -46305817 + (TTTA)n Simple_repeat Simple_repeat 2 63 0 405 0 0 0 chr18 39683437 39683482 -46305452 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 203 194 0 0 chr18 39683922 39683958 -46304976 + T-rich Low_complexity Low_complexity 1 36 0 2069 119 3 3 chr18 39686166 39686459 -46302475 + AluSq SINE Alu 1 293 -20 704 116 14 94 chr18 39686568 39686706 -46302228 + Tigger2a DNA MER2_type 2 128 -306 670 220 0 7 chr18 39686707 39686857 -46302077 - L1PBa LINE L1 -5145 1718 1570 7349 183 72 10 chr18 39686987 39688454 -46300480 - L1PBa LINE L1 -5303 1560 3 391 240 183 34 chr18 39688457 39688665 -46300269 - L1MCb LINE L1 -4063 2501 2263 388 280 15 0 chr18 39688675 39688807 -46300127 - L1PBa LINE L1 -6278 585 452 1649 256 113 84 chr18 39688880 39689363 -46299571 - L1MCb LINE L1 -4425 2139 1672 312 48 0 0 chr18 39689363 39689405 -46299529 + (TG)n Simple_repeat Simple_repeat 2 43 0 1649 256 113 84 chr18 39689405 39689834 -46299100 - L1MCb LINE L1 -4892 1672 1257 315 0 0 0 chr18 39689834 39689869 -46299065 + (TG)n Simple_repeat Simple_repeat 2 36 0 1649 256 113 84 chr18 39689869 39690491 -46298443 - L1MCb LINE L1 -5307 1257 552 749 276 31 102 chr18 39690576 39691127 -46297807 - L1MCb LINE L1 -5478 567 56 237 159 0 0 chr18 39691438 39691482 -46297452 + (TG)n Simple_repeat Simple_repeat 1 44 0 1900 167 0 10 chr18 39691736 39692036 -46296898 - AluSx SINE Alu -15 297 1 260 309 0 9 chr18 39692074 39692184 -46296750 - L1MEc LINE L1 -3939 2457 2349 9506 199 20 88 chr18 39692307 39694227 -46294707 - L1PBa LINE L1 -1365 5497 3449 308 156 16 0 chr18 39694227 39694291 -46294643 + Tigger3(Golem) DNA MER2_type 266 330 -2699 9506 199 20 88 chr18 39694291 39694303 -46294631 - L1PBa LINE L1 -3413 3449 3438 24182 32 1 0 chr18 39694303 39698014 -46290920 - L1PA3 LINE L1 -3 6152 2440 9506 199 20 88 chr18 39698014 39698428 -46290506 - L1PBa LINE L1 -3424 3438 2998 950 158 7 0 chr18 39698428 39698574 -46290360 - AluSq/x SINE Alu -166 147 1 9506 199 20 88 chr18 39698574 39701274 -46287660 - L1PBa LINE L1 -3864 2998 634 982 199 10 0 chr18 39701274 39701470 -46287464 - L1PBa LINE L1 -6663 200 3 334 307 0 0 chr18 39701528 39701616 -46287318 + MLT1F1 LTR MaLR 42 129 -438 1515 193 120 88 chr18 39701618 39702018 -46286916 + L1MD3 LINE L1 7410 7835 -160 2000 149 0 0 chr18 39702018 39702306 -46286628 - AluJb SINE Alu -24 288 1 1515 193 120 88 chr18 39702306 39702465 -46286469 + L1MD3 LINE L1 7835 7987 -8 21 82 0 0 chr18 39702808 39702857 -46286077 + AT_rich Low_complexity Low_complexity 1 49 0 2231 91 0 13 chr18 39704119 39704417 -46284517 - AluY SINE Alu -15 296 3 315 155 19 155 chr18 39704802 39704905 -46284029 - MER50 LTR ERV1 -645 89 1 807 198 64 6 chr18 39705263 39705420 -46283514 - AluJb SINE Alu -16 296 131 1940 155 40 26 chr18 39705466 39705815 -46283119 - THE1B LTR MaLR -10 354 1 726 180 0 0 chr18 39705815 39705926 -46283008 - FLAM_C SINE Alu -30 113 3 554 250 154 75 chr18 39706450 39706690 -46282244 + MIR SINE MIR 4 262 0 2259 113 0 0 chr18 39706814 39707116 -46281818 - AluSq SINE Alu -11 302 1 1721 176 3 13 chr18 39708643 39708955 -46279979 + AluJb SINE Alu 1 309 -3 26 0 0 0 chr18 39709234 39709260 -46279674 + AT_rich Low_complexity Low_complexity 1 26 0 25 51 0 0 chr18 39710848 39710887 -46278047 + AT_rich Low_complexity Low_complexity 1 39 0 359 334 111 21 chr18 39710898 39711284 -46277650 - HAL1 LINE L1 -38 2469 2049 287 319 52 17 chr18 39711321 39711437 -46277497 - MLT1J2 LTR MaLR -268 182 63 3091 163 51 2 chr18 39711639 39712186 -46276748 - Tigger1 DNA MER2_type -1 2417 1844 472 157 0 0 chr18 39712188 39712258 -46276676 - 7SK RNA RNA 0 193 124 259 338 0 0 chr18 39714721 39714795 -46274139 + GA-rich Low_complexity Low_complexity 4 77 0 256 337 10 20 chr18 39715507 39715608 -46273326 + MER5A DNA MER1_type 87 186 -3 885 161 12 0 chr18 39715902 39716063 -46272871 - L1MA10 LINE L1 -1 6333 6171 225 0 0 0 chr18 39716071 39716096 -46272838 + (TTG)n Simple_repeat Simple_repeat 3 27 0 238 26 51 0 chr18 39716475 39716514 -46272420 + (TCTA)n Simple_repeat Simple_repeat 1 41 0 197 33 33 0 chr18 39716515 39716545 -46272389 + (TG)n Simple_repeat Simple_repeat 2 32 0 1408 344 97 26 chr18 39716557 39717461 -46271473 + L2 LINE L2 1912 2879 -435 292 323 73 0 chr18 39717736 39717832 -46271102 + L2 LINE L2 3205 3307 -6 21 36 0 0 chr18 39718019 39718047 -46270887 + AT_rich Low_complexity Low_complexity 1 28 0 1986 121 58 28 chr18 39718426 39718790 -46270144 - THE1C LTR MaLR 0 375 1 2288 74 7 17 chr18 39718996 39719292 -46269642 + AluSq SINE Alu 1 293 -20 22 56 0 0 chr18 39719999 39720035 -46268899 + AT_rich Low_complexity Low_complexity 1 36 0 265 253 23 35 chr18 39720075 39720162 -46268772 + MIR SINE MIR 90 175 -87 29 0 0 0 chr18 39720651 39720680 -46268254 + AT_rich Low_complexity Low_complexity 1 29 0 370 284 62 59 chr18 39721310 39721634 -46267300 - L1MEd LINE L1 -4906 1213 889 1084 290 86 37 chr18 39721796 39722109 -46266825 + L1MD2 LINE L1 4386 4682 -1833 678 251 131 65 chr18 39722109 39722583 -46266351 - MLT1D LTR MaLR 0 505 1 1084 290 86 37 chr18 39722583 39723540 -46265394 + L1MD2 LINE L1 4682 5718 -797 294 194 0 0 chr18 39723622 39723689 -46265245 + (TATG)n Simple_repeat Simple_repeat 2 68 0 3870 266 44 9 chr18 39723750 39724915 -46264019 + L1MC4a LINE L1 6604 7808 0 223 365 126 13 chr18 39725391 39725550 -46263384 + MIR3 SINE MIR 30 206 -2 2237 70 18 0 chr18 39725646 39725932 -46263002 - AluSq SINE Alu -22 291 1 668 246 90 24 chr18 39725988 39726199 -46262735 + MIR SINE MIR 5 229 -33 32 0 0 0 chr18 39727320 39727352 -46261582 + AT_rich Low_complexity Low_complexity 1 32 0 2377 57 3 0 chr18 39727355 39727652 -46261282 - AluY SINE Alu -13 298 1 180 176 0 0 chr18 39727909 39727943 -46260991 + (CA)n Simple_repeat Simple_repeat 2 35 0 1221 274 43 75 chr18 39728536 39729778 -46259156 + L1MCb LINE L1 929 2375 -4370 303 221 106 10 chr18 39729790 39729894 -46259040 + L1MCb LINE L1 2382 2495 -4069 2163 110 3 0 chr18 39729906 39730198 -46258736 + AluSg SINE Alu 1 293 -17 618 259 153 17 chr18 39730204 39730508 -46258426 + L1MD2 LINE L1 5842 6137 -222 1718 137 109 6 chr18 39730978 39731291 -46257643 + MSTA LTR MaLR 1 345 -83 599 250 17 17 chr18 39731303 39731475 -46257459 + L1ME1 LINE L1 5990 6161 -5 230 324 0 0 chr18 39731485 39731553 -46257381 + L1ME3A LINE L1 5797 5864 -298 312 355 70 10 chr18 39731596 39731796 -46257138 + L1ME3A LINE L1 5940 6151 -19 1684 263 84 54 chr18 39731856 39732733 -46256201 + L1MC3 LINE L1 6189 7092 -693 657 242 94 16 chr18 39732755 39733025 -46255909 + L1MC4a LINE L1 7000 7220 -588 5685 148 20 15 chr18 39733041 39733395 -46255539 - L1PB1 LINE L1 -3 6148 5797 426 20 0 0 chr18 39733395 39733446 -46255488 + (TG)n Simple_repeat Simple_repeat 2 52 0 5685 148 20 15 chr18 39733446 39734410 -46254524 - L1PB1 LINE L1 -354 5797 4829 495 283 78 67 chr18 39736140 39736561 -46252373 + MSTC LTR MaLR 3 428 0 3649 277 84 36 chr18 39736584 39736965 -46251969 + L1MEc LINE L1 95 456 -5759 2213 71 57 0 chr18 39736965 39737247 -46251687 + AluSp SINE Alu 9 306 -7 3649 277 84 36 chr18 39737247 39738341 -46250593 + L1MEc LINE L1 456 1496 -4719 503 15 0 0 chr18 39738341 39738406 -46250528 - L1PA2 LINE L1 0 6155 6091 3649 277 84 36 chr18 39738406 39739773 -46249161 + L1MEc LINE L1 1496 3041 -3174 744 306 45 43 chr18 39739782 39740288 -46248646 + L1M4 LINE L1 2392 2898 -3248 2270 267 106 28 chr18 39740446 39741558 -46247376 - L1MC3 LINE L1 -765 6176 5870 2187 128 0 0 chr18 39741558 39741864 -46247070 + AluSq SINE Alu 1 306 -7 2270 267 106 28 chr18 39741864 39741948 -46246986 - L1MC3 LINE L1 -1071 5870 5794 1319 281 100 53 chr18 39742000 39744349 -46244585 - L1MC3 LINE L1 -3231 3710 1071 254 286 12 48 chr18 39744990 39745074 -46243860 - MIR SINE MIR -108 154 74 371 154 78 15 chr18 39745937 39746413 -46242521 + (TA)n Simple_repeat Simple_repeat 1 506 0 241 271 35 0 chr18 39746426 39746511 -46242423 + (CATATA)n Simple_repeat Simple_repeat 2 89 0 10379 140 39 12 chr18 39746808 39748584 -46240350 - Tigger1 DNA MER2_type -564 1854 30 25 0 0 0 chr18 39748637 39748662 -46240272 + AT_rich Low_complexity Low_complexity 1 25 0 1805 94 0 0 chr18 39751377 39751622 -46237312 - L1PA7 LINE L1 -8 6146 5902 24 0 0 0 chr18 39753751 39753775 -46235159 + AT_rich Low_complexity Low_complexity 1 24 0 760 320 21 17 chr18 39754551 39754785 -46234149 + MIR SINE MIR 1 235 -27 647 310 4 39 chr18 39758786 39759015 -46229919 - MIR SINE MIR -8 254 34 316 271 167 20 chr18 39759577 39759785 -46229149 - MIR SINE MIR -10 252 16 1286 227 0 38 chr18 39760047 39760338 -46228596 - AluJo SINE Alu -30 282 3 405 299 34 43 chr18 39761257 39761464 -46227470 - MIR SINE MIR -26 236 32 340 384 47 14 chr18 39761531 39761742 -46227192 - L3 LINE CR1 -345 1232 1015 4191 114 53 3 chr18 39762428 39763050 -46225884 - MER39B LTR ERV1 0 653 1 3338 131 85 5 chr18 39763293 39763881 -46225053 + LTR24C LTR ERV1 1 635 0 595 176 29 0 chr18 39764354 39764456 -46224478 + U6 snRNA snRNA 1 105 -2 1772 202 24 5 chr18 39764456 39764828 -46224106 + L1MB3 LINE L1 5794 6172 -11 327 229 145 34 chr18 39765005 39765184 -46223750 + MLT1I LTR MaLR 15 213 -196 441 278 124 63 chr18 39765285 39765783 -46223151 - HAL1 LINE L1 -1089 1418 812 199 208 0 39 chr18 39769363 39769440 -46219494 + GA-rich Low_complexity Low_complexity 2 75 0 22 0 0 0 chr18 39769714 39769736 -46219198 + AT_rich Low_complexity Low_complexity 1 22 0 348 64 0 0 chr18 39770266 39770313 -46218621 + (TG)n Simple_repeat Simple_repeat 1 47 0 252 0 0 0 chr18 39770312 39770340 -46218594 + (GA)n Simple_repeat Simple_repeat 1 28 0 * 2549 41 0 16 chr18 39772695 39773010 -46215924 + AluY SINE Alu 1 310 -1 1656 135 15 0 chr18 39773190 39773457 -46215477 - L1PA16 LINE L1 -419 5747 5477 2099 156 5 54 chr18 39773457 39773866 -46215068 + L1PA16 LINE L1 5768 6157 -9 190 217 0 101 chr18 39774474 39774543 -46214391 - L2 LINE L2 -1 3271 3210 2206 100 3 20 chr18 39774558 39774859 -46214075 - AluSp SINE Alu -17 296 1 27 0 0 0 chr18 39774966 39774993 -46213941 + AT_rich Low_complexity Low_complexity 1 27 0 200 217 0 0 chr18 39775290 39775336 -46213598 + T-rich Low_complexity Low_complexity 1 46 0 1496 193 26 3 chr18 39775783 39776088 -46212846 - L1MC2 LINE L1 -13 6331 6020 292 339 24 32 chr18 39776751 39776875 -46212059 + L2 LINE L2 3127 3249 -23 223 469 27 0 chr18 39777432 39777579 -46211355 + L2 LINE L2 3085 3235 -37 2051 148 24 24 chr18 39781475 39781848 -46207086 + THE1C LTR MaLR 1 373 -2 326 339 8 24 chr18 39782216 39782340 -46206594 + MIR3 SINE MIR 85 206 -2 25 65 0 0 chr18 39782878 39782924 -46206010 + AT_rich Low_complexity Low_complexity 1 46 0 290 250 60 0 chr18 39785453 39785553 -46203381 + L1ME4a LINE L1 5795 5900 -221 642 189 16 0 chr18 39785787 39785909 -46203025 - LTR33 LTR ERVL -1 520 397 760 324 42 8 chr18 39785966 39786228 -46202706 - LTR33 LTR ERVL -250 271 1 222 37 0 0 chr18 39786730 39786757 -46202177 + (A)n Simple_repeat Simple_repeat 1 27 0 339 324 50 14 chr18 39787294 39787433 -46201501 + L2 LINE L2 2173 2316 -998 184 316 0 0 chr18 39787567 39787624 -46201310 + L2 LINE L2 3257 3313 0 1709 188 64 19 chr18 39788742 39789115 -46199819 + MLT1B LTR MaLR 1 390 0 2357 111 125 125 chr18 39789142 39789806 -46199128 - MER4A LTR ERV1 0 664 1 4034 146 41 3 chr18 39789854 39790539 -46198395 + MER50 LTR ERV1 1 711 -23 351 309 133 24 chr18 39790541 39790998 -46197936 - L1MC/D LINE L1 -2037 5771 5265 2171 117 0 0 chr18 39791332 39791614 -46197320 + AluSc SINE Alu 1 282 -27 274 256 0 0 chr18 39791645 39791735 -46197199 + L1MC4 LINE L1 6614 6703 -1339 384 311 52 56 chr18 39791770 39792075 -46196859 - L1MC/D LINE L1 -3198 2948 2645 345 310 98 41 chr18 39792160 39792611 -46196323 - L1MC/D LINE L1 -3526 2620 2147 1221 218 71 20 chr18 39793616 39794007 -46194927 - MER66A LTR ERV1 -23 525 97 1933 191 14 3 chr18 39794044 39794395 -46194539 - MER66A-int LTR ERV1 0 6676 6322 1288 234 127 5 chr18 39794459 39794843 -46194091 - MER66-int LTR ERV1 -1609 6147 4609 359 279 23 0 chr18 39794843 39794929 -46194005 - MER4D LTR ERV1 -712 160 73 913 179 0 112 chr18 39794929 39795180 -46193754 - MER66-int LTR ERV1 -2243 4433 4211 2002 116 3 14 chr18 39795779 39796071 -46192863 - AluSx SINE Alu -5 307 19 266 333 126 0 chr18 39796461 39796596 -46192338 - MIR SINE MIR -34 228 77 310 297 55 101 chr18 39796645 39796835 -46192099 - MIR SINE MIR -66 142 3 182 217 109 54 chr18 39798685 39798777 -46190157 + MIR SINE MIR 165 261 -1 23 0 0 0 chr18 39799066 39799089 -46189845 + AT_rich Low_complexity Low_complexity 1 23 0 224 231 0 0 chr18 39799122 39799174 -46189760 + (TATG)n Simple_repeat Simple_repeat 4 55 0 25 31 0 0 chr18 39799286 39799318 -46189616 + AT_rich Low_complexity Low_complexity 1 32 0 1243 106 3 13 chr18 39799379 39799688 -46189246 + (GAAA)n Simple_repeat Simple_repeat 4 307 0 186 191 0 0 chr18 39799911 39799953 -46188981 + (CA)n Simple_repeat Simple_repeat 1 42 0 200 233 26 9 chr18 39799955 39800071 -46188863 + (TA)n Simple_repeat Simple_repeat 1 118 0 889 229 88 79 chr18 39800100 39800522 -46188412 - MLT2B1 LTR ERVL -34 486 5 10730 183 31 10 chr18 39800525 39802482 -46186452 - ERVL-B1 LTR ERVL -9 5755 3759 181 261 174 11 chr18 39804232 39804324 -46184610 + MIR SINE MIR 120 226 -36 787 262 16 0 chr18 39805838 39806021 -46182913 - MER5A DNA MER1_type -3 186 1 2422 82 0 0 chr18 39806928 39807232 -46181702 + AluY SINE Alu 1 304 -7 23 0 0 0 chr18 39808406 39808429 -46180505 + AT_rich Low_complexity Low_complexity 1 23 0 228 339 79 17 chr18 39808921 39809098 -46179836 - MIR3 SINE MIR 0 208 21 21 0 0 0 chr18 39809367 39809388 -46179546 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr18 39812388 39812412 -46176522 + AT_rich Low_complexity Low_complexity 1 24 0 2447 48 0 0 chr18 39812412 39812701 -46176233 - AluY SINE Alu -10 301 13 2706 177 97 59 chr18 39813223 39813401 -46175533 - MER66B-int LTR ERV1 -2632 4044 3874 2373 148 3 8 chr18 39813401 39813778 -46175156 - THE1C LTR MaLR 0 375 1 2706 177 97 59 chr18 39813778 39814483 -46174451 - MER66B-int LTR ERV1 -2802 3874 1204 2481 153 21 5 chr18 39814485 39814922 -46174012 - MER66B-int LTR ERV1 -222 1564 1121 460 326 42 36 chr18 39814934 39815127 -46173807 - MER66B-int LTR ERV1 -3576 3100 2907 1514 276 71 7 chr18 39815143 39815581 -46173353 - MER66B-int LTR ERV1 -6160 516 51 1243 215 47 22 chr18 39815589 39815919 -46173015 - MER66B LTR ERV1 0 523 195 370 324 48 20 chr18 39816046 39816296 -46172638 + HAL1b LINE L1 329 585 -763 409 328 53 57 chr18 39817153 39817683 -46171251 + L1M4 LINE L1 2485 3012 -3134 21 71 0 0 chr18 39817718 39817760 -46171174 + AT_rich Low_complexity Low_complexity 1 42 0 238 273 13 39 chr18 39817784 39817861 -46171073 - MER5B DNA MER1_type -20 158 84 3936 170 42 14 chr18 39817908 39819384 -46169550 + L1MA4 LINE L1 4532 6057 -243 2422 193 2 39 chr18 39819384 39819589 -46169345 + LTR27 LTR ERV1 2 213 -423 2400 81 0 7 chr18 39819589 39819896 -46169038 - AluY SINE Alu -6 305 1 2422 193 2 39 chr18 39819896 39820207 -46168727 + LTR27 LTR ERV1 213 499 -137 639 177 14 41 chr18 39820269 39820416 -46168518 + LTR27 LTR ERV1 494 636 0 352 208 0 0 chr18 39820418 39820490 -46168444 + L1MA4 LINE L1 6054 6125 -175 33 43 0 0 chr18 39820494 39820541 -46168393 + AT_rich Low_complexity Low_complexity 1 47 0 490 250 64 112 chr18 39820686 39821062 -46167872 + L1ME4a LINE L1 5724 6081 -40 195 293 93 0 chr18 39821335 39821410 -46167524 + MIR SINE MIR 72 153 -109 516 231 0 31 chr18 39822245 39822375 -46166559 - FRAM SINE Alu -3 173 48 252 0 0 0 chr18 39822473 39822501 -46166433 + (T)n Simple_repeat Simple_repeat 1 28 0 545 224 9 9 chr18 39822959 39823075 -46165859 - L1PA16 LINE L1 -26 6140 6025 1161 224 32 58 chr18 39823436 39823767 -46165167 - MER21B LTR ERV1 -69 794 473 2075 117 3 46 chr18 39823767 39824093 -46164841 + AluSx SINE Alu 1 312 0 1161 224 32 58 chr18 39824093 39824133 -46164801 - MER21B LTR ERV1 -390 473 433 2041 182 3 26 chr18 39824133 39824512 -46164422 - MER66B LTR ERV1 0 486 117 21 0 0 0 chr18 39825522 39825543 -46163391 + AT_rich Low_complexity Low_complexity 1 21 0 3297 126 8 0 chr18 39825864 39826355 -46162579 - LOR1a LTR ERV1 -2 495 1 612 195 97 39 chr18 39826761 39826915 -46162019 - FRAM SINE Alu 0 166 4 252 0 0 0 chr18 39826983 39827011 -46161923 + (T)n Simple_repeat Simple_repeat 1 28 0 1050 251 13 95 chr18 39827440 39827818 -46161116 - MER21B LTR ERV1 -516 347 1 26 0 0 0 chr18 39831918 39831944 -46156990 + AT_rich Low_complexity Low_complexity 1 26 0 321 257 70 88 chr18 39832338 39832509 -46156425 - L2 LINE L2 -118 3195 3028 249 33 0 0 chr18 39833918 39833948 -46154986 + (TG)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr18 39834562 39834583 -46154351 + AT_rich Low_complexity Low_complexity 1 21 0 839 238 56 23 chr18 39835235 39835449 -46153485 + MER58A DNA MER1_type 1 221 -3 477 371 37 15 chr18 39835554 39835880 -46153054 - MLT1K LTR MaLR -158 430 98 1122 165 76 120 chr18 39836452 39836834 -46152100 + MLT1A1 LTR MaLR 1 365 0 26 50 0 0 chr18 39837327 39837367 -46151567 + AT_rich Low_complexity Low_complexity 1 40 0 192 125 0 0 chr18 39837586 39837618 -46151316 + (TA)n Simple_repeat Simple_repeat 1 32 0 297 211 66 0 chr18 39837645 39837811 -46151123 + (TA)n Simple_repeat Simple_repeat 1 177 0 186 97 0 0 chr18 39837811 39837821 -46151113 + (CA)n Simple_repeat Simple_repeat 2 11 -21 2249 143 34 14 chr18 39837821 39838178 -46150756 + THE1B LTR MaLR 1 364 0 186 97 0 0 chr18 39838178 39838198 -46150736 + (CA)n Simple_repeat Simple_repeat 10 32 0 526 264 86 70 chr18 39838423 39838851 -46150083 + L1ME2 LINE L1 43 477 -5919 1210 259 117 21 chr18 39839081 39839367 -46149567 + L1ME2 LINE L1 2595 2852 -3363 1860 164 38 16 chr18 39839367 39839734 -46149200 - THE1C LTR MaLR 0 375 1 1210 259 117 21 chr18 39839734 39840199 -46148735 + L1ME2 LINE L1 2852 3418 -2797 1001 250 83 83 chr18 39840274 39841339 -46147595 + L1ME2 LINE L1 4927 5981 -252 2226 105 3 3 chr18 39841339 39841644 -46147290 + AluSp SINE Alu 1 305 -8 1001 250 83 83 chr18 39841644 39841865 -46147069 + L1ME2 LINE L1 5981 6201 -32 207 245 19 0 chr18 39841885 39841938 -46146996 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 254 348 35 26 chr18 39841995 39842110 -46146824 + MIR SINE MIR 37 152 -110 2290 79 0 7 chr18 39842274 39842577 -46146357 - AluY SINE Alu -10 301 1 26 0 0 0 chr18 39843322 39843348 -46145586 + AT_rich Low_complexity Low_complexity 1 26 0 480 331 147 16 chr18 39843995 39844445 -46144489 + L1ME4a LINE L1 5353 5861 -260 191 61 30 0 chr18 39844733 39844766 -46144168 + (TC)n Simple_repeat Simple_repeat 2 35 0 28 61 0 0 chr18 39844942 39844991 -46143943 + AT_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr18 39845011 39845032 -46143902 + AT_rich Low_complexity Low_complexity 1 21 0 630 321 130 17 chr18 39845718 39846195 -46142739 + L2 LINE L2 2340 2870 -444 432 234 84 9 chr18 39896782 39896889 -46092045 + MLT1H LTR MaLR 425 539 -10 238 268 0 0 chr18 39896910 39896966 -46091968 + MLT1K LTR MaLR 531 586 -2 201 121 0 0 chr18 39897285 39897318 -46091616 + (CA)n Simple_repeat Simple_repeat 1 33 0 661 293 93 34 chr18 39897854 39898240 -46090694 + MLT1I LTR MaLR 1 409 0 210 37 0 0 chr18 39898637 39898664 -46090270 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 2230 174 169 141 chr18 39899067 39900059 -46088875 - LTR28 LTR ERV1 0 1020 1 2385 101 0 0 chr18 39900137 39900445 -46088489 - AluSq SINE Alu -5 308 1 925 96 16 0 chr18 39900527 39900652 -46088282 + AluSp/q SINE Alu 169 295 -18 4865 109 58 44 chr18 39901313 39902656 -46086278 + pTR5 LTR ERV1 738 2606 0 2158 117 3 13 chr18 39902718 39903027 -46085907 - AluSq SINE Alu -7 306 1 199 320 0 0 chr18 39903244 39903294 -46085640 + L3b LINE CR1 1531 1580 -3 275 296 177 21 chr18 39903411 39903597 -46085337 + MIR SINE MIR 22 236 -26 2525 57 0 0 chr18 39904481 39904778 -46084156 - AluY SINE Alu -14 297 1 24 32 0 0 chr18 39906431 39906462 -46082472 + AT_rich Low_complexity Low_complexity 1 31 0 4125 178 50 43 chr18 39906726 39908032 -46080902 + L1MB1 LINE L1 4826 6165 -3 660 216 19 6 chr18 39908048 39908210 -46080724 - MER3 DNA MER1_type -41 168 5 288 290 107 30 chr18 39909663 39909794 -46079140 + MIR3 SINE MIR 67 207 -1 448 302 63 6 chr18 39910095 39910254 -46078680 - MIR3 SINE MIR -3 205 38 4292 220 63 42 chr18 39911679 39913332 -46075602 + L1MC3 LINE L1 3838 4787 -1359 392 0 21 0 chr18 39913332 39913380 -46075554 + (CA)n Simple_repeat Simple_repeat 2 50 0 4292 220 63 42 chr18 39913380 39914010 -46074924 + L1MC3 LINE L1 4787 5403 -743 256 224 0 17 chr18 39914014 39914072 -46074862 + L1MC3 LINE L1 6875 6931 -854 422 253 55 6 chr18 39914101 39914283 -46074651 + L1MC3 LINE L1 6907 7097 -688 274 286 11 11 chr18 39914283 39914374 -46074560 + MLT1F1 LTR MaLR 35 125 -442 567 226 77 13 chr18 39914375 39914530 -46074404 + L1MC3 LINE L1 7198 7362 -423 3525 278 86 24 chr18 39914545 39916807 -46072127 + L1M4 LINE L1 2890 5308 -838 1497 226 0 4 chr18 39916811 39917090 -46071844 + AluJo SINE Alu 3 280 -32 645 14 0 0 chr18 39917094 39917168 -46071766 + (TAAAA)n Simple_repeat Simple_repeat 2 75 0 11324 218 40 37 chr18 39917228 39920379 -46068555 + L1MA4A LINE L1 15 3155 -4053 14669 25 0 0 chr18 39920379 39922880 -46066054 + L1PA3 LINE L1 3653 6155 0 11324 218 40 37 chr18 39922880 39922902 -46066032 + L1MA4A LINE L1 3155 3175 -4033 1752 158 3 28 chr18 39922902 39923187 -46065747 + AluSx SINE Alu 21 298 -14 11324 218 40 37 chr18 39923187 39925406 -46063528 + L1MA4A LINE L1 3175 5483 -1725 4413 196 27 6 chr18 39925528 39926468 -46062466 + L1MA4A LINE L1 5423 6392 -973 207 0 0 0 chr18 39926468 39926491 -46062443 + (CAT)n Simple_repeat Simple_repeat 2 24 0 4413 196 27 6 chr18 39926491 39926955 -46061979 + L1MA4A LINE L1 6392 6845 -520 1459 152 9 4 chr18 39926962 39927193 -46061741 + L1PA13 LINE L1 11 242 -7339 19212 174 16 14 chr18 39927199 39928201 -46060733 + L1PA13 LINE L1 2794 3793 -3808 2403 80 3 10 chr18 39928201 39928514 -46060420 + AluY SINE Alu 1 311 0 19212 174 16 14 chr18 39928514 39932280 -46056654 + L1PA13 LINE L1 3793 7582 -19 2479 137 23 5 chr18 39932303 39932735 -46056199 + L1MA4A LINE L1 6831 7270 -95 1244 235 47 47 chr18 39932786 39933232 -46055702 + L1ME1 LINE L1 5677 6122 -44 401 209 137 0 chr18 39933139 39933278 -46055656 + L1MA10 LINE L1 6175 6332 -2 * 511 269 7 21 chr18 39933470 39933611 -46055323 - MIR SINE MIR -72 190 52 588 303 129 31 chr18 39933717 39934205 -46054729 + L1ME LINE L1 3809 4344 -1802 26 50 0 0 chr18 39934215 39934255 -46054679 + AT_rich Low_complexity Low_complexity 1 40 0 1644 267 19 30 chr18 39934564 39935104 -46053830 - HsTC2a DNA Tc2 -192 552 19 234 271 18 82 chr18 39935280 39935451 -46053483 + L1ME LINE L1 5667 5826 -333 245 206 15 0 chr18 39935455 39935523 -46053411 + (TA)n Simple_repeat Simple_repeat 1 69 0 203 169 15 62 chr18 39935542 39935607 -46053327 + A-rich Low_complexity Low_complexity 3 64 0 204 40 0 0 chr18 39937787 39937812 -46051122 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 972 163 56 93 chr18 39939420 39939689 -46049245 + MSTB1 LTR MaLR 1 259 -173 1818 158 143 31 chr18 39939689 39940074 -46048860 + MSTA LTR MaLR 1 428 0 596 166 74 74 chr18 39940092 39940255 -46048679 + MSTB1 LTR MaLR 295 457 0 22 0 0 0 chr18 39940441 39940463 -46048471 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr18 39940550 39940574 -46048360 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr18 39940629 39940651 -46048283 + AT_rich Low_complexity Low_complexity 1 22 0 522 230 42 18 chr18 39940881 39941046 -46047888 + LTR41 LTR ERVL 1 169 -604 31 26 0 0 chr18 39941679 39941717 -46047217 + AT_rich Low_complexity Low_complexity 1 38 0 186 184 0 0 chr18 39945312 39945350 -46043584 + MIR SINE MIR 211 248 -14 21 36 0 0 chr18 39945409 39945437 -46043497 + AT_rich Low_complexity Low_complexity 1 28 0 239 213 0 0 chr18 39945815 39945862 -46043072 + MIR SINE MIR 194 240 -22 193 296 37 0 chr18 39945830 39945884 -46043050 + L2 LINE L2 3213 3268 -4 * 246 401 54 6 chr18 39946378 39946545 -46042389 - MIR3 SINE MIR -3 205 31 25 0 0 0 chr18 39947296 39947321 -46041613 + AT_rich Low_complexity Low_complexity 1 25 0 1406 119 59 9 chr18 39947672 39947891 -46041043 + MER30 DNA MER1_type 1 230 0 27 62 0 0 chr18 39949919 39949967 -46038967 + AT_rich Low_complexity Low_complexity 1 48 0 2039 130 32 35 chr18 39950053 39950429 -46038505 + THE1C LTR MaLR 1 375 0 257 220 17 17 chr18 39950590 39950649 -46038285 - MIR3 SINE MIR -40 168 110 188 375 10 65 chr18 39952198 39952398 -46036536 + MIR SINE MIR 44 232 -30 947 215 45 42 chr18 39952812 39953055 -46035879 - L1MB4 LINE L1 -6 6174 5928 1903 152 64 3 chr18 39953055 39953383 -46035551 + MER7A DNA MER2_type 1 346 0 947 215 45 42 chr18 39953383 39953427 -46035507 - L1MB4 LINE L1 -252 5928 5886 4901 216 29 44 chr18 39953429 39954204 -46034730 - L1MB4 LINE L1 -568 5612 4827 2161 137 0 0 chr18 39954204 39954504 -46034430 - AluSx SINE Alu -12 300 1 4901 216 29 44 chr18 39954504 39955554 -46033380 - L1MB4 LINE L1 -1353 4827 3816 704 287 12 66 chr18 39957204 39957462 -46031472 + MLT1H LTR MaLR 30 273 -276 22 35 0 0 chr18 39957888 39957917 -46031017 + AT_rich Low_complexity Low_complexity 1 29 0 2382 98 0 0 chr18 39960996 39961301 -46027633 + AluSq SINE Alu 1 305 -8 416 361 101 52 chr18 39961833 39962218 -46026716 - L2 LINE L2 -2 3270 2867 247 341 44 55 chr18 39962293 39962475 -46026459 - MIR SINE MIR -18 244 65 2077 102 25 0 chr18 39962970 39963253 -46025681 + AluY SINE Alu 1 290 -21 21 0 0 0 chr18 39963386 39963407 -46025527 + AT_rich Low_complexity Low_complexity 1 21 0 302 245 82 20 chr18 39963452 39963550 -46025384 + Charlie8 DNA MER1_type 106 209 -2208 2002 283 36 38 chr18 39964148 39964482 -46024452 - MER21B LTR ERV1 -123 808 475 2189 116 3 3 chr18 39964482 39964785 -46024149 + AluSc SINE Alu 1 303 -6 2002 283 36 38 chr18 39964785 39965239 -46023695 - MER21B LTR ERV1 -456 475 10 234 0 0 0 chr18 39966344 39966370 -46022564 + (TC)n Simple_repeat Simple_repeat 2 27 0 243 88 0 0 chr18 39966371 39966405 -46022529 + (TA)n Simple_repeat Simple_repeat 1 34 0 412 317 68 6 chr18 39966411 39966572 -46022362 - MIR SINE MIR -58 204 34 21 0 0 0 chr18 39966658 39966679 -46022255 + AT_rich Low_complexity Low_complexity 1 21 0 203 233 0 27 chr18 39966746 39966819 -46022115 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 213 152 0 22 chr18 39966969 39967015 -46021919 + T-rich Low_complexity Low_complexity 1 45 0 305 353 48 34 chr18 39967780 39967987 -46020947 - MIR SINE MIR -6 256 47 505 293 116 0 chr18 39969639 39969749 -46019185 + MER113 DNA MER1_type? 207 303 -218 934 214 148 45 chr18 39969749 39970108 -46018826 + MSTD LTR MaLR 1 396 0 505 293 116 0 chr18 39970108 39970229 -46018705 + MER113 DNA MER1_type? 303 465 -56 1758 174 28 35 chr18 39971014 39971441 -46017493 + MLT2B2 LTR ERVL 1 472 -43 372 77 0 0 chr18 39971466 39971518 -46017416 + (CA)n Simple_repeat Simple_repeat 1 52 0 245 163 0 0 chr18 39971570 39971586 -46017348 + MLT2B3 LTR ERVL 459 474 -80 455 0 0 18 chr18 39971586 39971642 -46017292 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 245 163 0 0 chr18 39971642 39971682 -46017252 + MLT2B3 LTR ERVL 473 554 0 22 56 0 0 chr18 39973162 39973198 -46015736 + AT_rich Low_complexity Low_complexity 1 36 0 1033 164 34 42 chr18 39973213 39973451 -46015483 + MER46A DNA MER2_type 1 236 0 2024 180 25 42 chr18 39973726 39974159 -46014775 - MSTB LTR MaLR 0 426 1 1532 119 12 12 chr18 39974888 39975140 -46013794 + LTR1 LTR ERV1 1 252 -533 286 240 19 106 chr18 39975125 39975229 -46013705 + LTR1 LTR ERV1 194 288 -497 * 4185 109 36 57 chr18 39975229 39976541 -46012393 + pTR5 LTR ERV1 743 2468 0 2737 148 46 6 chr18 39976541 39977022 -46011912 + LTR1 LTR ERV1 285 784 -1 242 243 290 0 chr18 39977033 39977140 -46011794 + L3 LINE CR1 688 825 -752 230 0 0 32 chr18 39977465 39977496 -46011438 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 22 0 0 0 chr18 39977944 39977966 -46010968 + AT_rich Low_complexity Low_complexity 1 22 0 396 359 53 25 chr18 39979052 39979297 -46009637 + MIR SINE MIR 8 259 -3 218 345 86 43 chr18 39979500 39979732 -46009202 - MIR SINE MIR -1 261 20 599 291 20 0 chr18 39980145 39980296 -46008638 - MER5A DNA MER1_type -34 155 2 21 0 0 0 chr18 39980964 39980985 -46007949 + AT_rich Low_complexity Low_complexity 1 21 0 339 244 94 16 chr18 39982069 39982196 -46006738 - L1ME4a LINE L1 -11 6110 5974 941 188 5 42 chr18 39982357 39982494 -46006440 - MER5A DNA MER1_type -4 185 55 2089 122 7 3 chr18 39982494 39982789 -46006145 + AluSg SINE Alu 1 296 -14 941 188 5 42 chr18 39982789 39982843 -46006091 - MER5A DNA MER1_type -134 55 1 21 0 0 0 chr18 39982915 39982936 -46005998 + AT_rich Low_complexity Low_complexity 1 21 0 627 258 44 14 chr18 39983762 39984110 -46004824 - LTR37B LTR ERV1 0 468 112 186 43 0 0 chr18 39986568 39986591 -46002343 + (ATTG)n Simple_repeat Simple_repeat 3 25 0 180 0 0 0 chr18 39986921 39986941 -46001993 + (T)n Simple_repeat Simple_repeat 1 20 0 232 290 0 0 chr18 39987891 39987960 -46000974 + CT-rich Low_complexity Low_complexity 2 70 0 21 0 0 0 chr18 39988544 39988565 -46000369 + AT_rich Low_complexity Low_complexity 1 21 0 282 29 0 0 chr18 39988977 39989012 -45999922 + (CAAA)n Simple_repeat Simple_repeat 4 38 0 2327 200 51 5 chr18 39989549 39990044 -45998890 + MLT2B3 LTR ERVL 1 375 -39 204 216 0 0 chr18 39990137 39990188 -45998746 + (TATATG)n Simple_repeat Simple_repeat 3 53 0 237 30 30 0 chr18 39990630 39990663 -45998271 + (TA)n Simple_repeat Simple_repeat 2 35 0 700 206 17 0 chr18 39990680 39990855 -45998079 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 843 206 0 0 chr18 39990885 39991248 -45997686 + (CA)n Simple_repeat Simple_repeat 1 363 0 243 242 0 0 chr18 39991250 39991312 -45997622 + (CATA)n Simple_repeat Simple_repeat 3 64 0 424 319 104 31 chr18 39992035 39992295 -45996639 + L3 LINE CR1 948 1226 -351 529 270 56 64 chr18 39992474 39992707 -45996227 + MIR SINE MIR 3 233 -29 366 241 105 8 chr18 39993203 39993336 -45995598 + MLT1J2 LTR MaLR 264 409 -41 474 310 33 28 chr18 39993528 39993741 -45995193 - MIR SINE MIR 0 262 49 271 232 32 8 chr18 39994399 39994524 -45994410 + CT-rich Low_complexity Low_complexity 6 133 0 2243 122 3 0 chr18 39994601 39994904 -45994030 + AluSx SINE Alu 1 304 -8 240 294 71 0 chr18 39994907 39994992 -45993942 + MIR SINE MIR 49 139 -69 203 88 29 0 chr18 39995201 39995235 -45993699 + (TCTA)n Simple_repeat Simple_repeat 3 37 0 25 0 0 0 chr18 39995235 39995260 -45993674 + AT_rich Low_complexity Low_complexity 1 25 0 189 132 0 0 chr18 39996413 39996451 -45992483 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 204 375 161 0 chr18 39997423 39997535 -45991399 - L2 LINE L2 -5 3267 3138 1795 192 6 6 chr18 39997713 39998057 -45990877 + MER2 DNA MER2_type 1 344 0 241 323 8 62 chr18 39999092 39999222 -45989712 - L2 LINE L2 -9 3304 3182 252 208 0 0 chr18 40000844 40000897 -45988037 + MLT1J2 LTR MaLR 364 416 -34 992 167 6 19 chr18 40000899 40001095 -45987839 - AluSc SINE Alu 0 312 119 22 35 0 0 chr18 40001102 40001131 -45987803 + AT_rich Low_complexity Low_complexity 1 29 0 995 123 0 0 chr18 40001976 40002114 -45986820 - AluSq/x SINE Alu -175 138 1 2332 104 0 0 chr18 40003482 40003789 -45985145 + AluSx SINE Alu 1 307 -5 24 32 0 0 chr18 40003828 40003859 -45985075 + AT_rich Low_complexity Low_complexity 1 31 0 1167 82 0 0 chr18 40003967 40004114 -45984820 + AluSg/x SINE Alu 159 305 -5 219 88 0 0 chr18 40004799 40004833 -45984101 + (TAA)n Simple_repeat Simple_repeat 1 34 0 369 320 40 13 chr18 40006040 40006190 -45982744 - MIR3 SINE MIR -23 185 32 1326 158 0 0 chr18 40008337 40008539 -45980395 + AluSg/x SINE Alu 109 310 -2 203 200 0 0 chr18 40008961 40008996 -45979938 + A-rich Low_complexity Low_complexity 1 35 0 2234 120 3 0 chr18 40009338 40009639 -45979295 + AluSx SINE Alu 1 302 -10 1159 234 10 60 chr18 40009667 40010051 -45978883 + MLT1A1 LTR MaLR 1 365 0 724 311 41 41 chr18 40010818 40011156 -45977778 - L2 LINE L2 -1361 1953 1616 351 287 0 26 chr18 40011703 40011818 -45977116 + GA-rich Low_complexity Low_complexity 4 115 0 278 182 0 0 chr18 40013278 40013333 -45975601 - MER53 DNA DNA 0 189 135 237 211 0 0 chr18 40013336 40013393 -45975541 + (TA)n Simple_repeat Simple_repeat 1 57 0 440 235 25 0 chr18 40013393 40013512 -45975422 - MER53 DNA DNA -67 122 1 26 30 0 0 chr18 40014756 40014789 -45974145 + AT_rich Low_complexity Low_complexity 1 33 0 284 171 9 48 chr18 40015069 40015174 -45973760 + GA-rich Low_complexity Low_complexity 3 103 0 4449 136 7 50 chr18 40017164 40017308 -45971626 + MER72 LTR ERV1 1 150 -572 243 0 0 0 chr18 40017308 40017335 -45971599 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1593 184 22 0 chr18 40017340 40017612 -45971322 - AluJb SINE Alu -34 278 1 4449 136 7 50 chr18 40017612 40018216 -45970718 + MER72 LTR ERV1 154 722 0 30 83 0 0 chr18 40018621 40018693 -45970241 + AT_rich Low_complexity Low_complexity 1 72 0 214 297 0 0 chr18 40019205 40019269 -45969665 - MIR SINE MIR -55 207 144 710 266 107 64 chr18 40019287 40019853 -45969081 + L2 LINE L2 2716 3313 0 25 0 0 0 chr18 40020933 40020958 -45967976 + AT_rich Low_complexity Low_complexity 1 25 0 2151 153 78 9 chr18 40021852 40022276 -45966658 + LOR1b LTR ERV1 1 453 -8 2382 103 0 0 chr18 40024110 40024421 -45964513 - AluSq SINE Alu -2 311 1 214 294 73 52 chr18 40024484 40024620 -45964314 - MIR SINE MIR -122 140 2 1702 147 28 25 chr18 40025097 40025383 -45963551 + AluSx SINE Alu 1 287 -25 23 54 0 0 chr18 40025397 40025434 -45963500 + AT_rich Low_complexity Low_complexity 1 37 0 5075 101 41 18 chr18 40025675 40026438 -45962496 - LTR17 LTR ERV1 0 780 1 1345 197 24 61 chr18 40028354 40028649 -45960285 - MER54A LTR ERVL -617 284 1 229 182 23 0 chr18 40028658 40028702 -45960232 - MIR SINE MIR -62 146 102 610 237 13 26 chr18 40028754 40028906 -45960028 + MLT1E1 LTR MaLR 1 150 -504 1586 158 45 11 chr18 40029777 40030042 -45958892 - MER1B DNA MER1_type 0 339 66 229 378 119 10 chr18 40030229 40030430 -45958504 - L3 LINE CR1 -143 1434 1212 439 351 94 25 chr18 40030751 40031144 -45957790 - L3 LINE CR1 -816 761 342 237 127 270 0 chr18 40031276 40031339 -45957595 + MADE1 DNA Mariner 1 80 0 253 208 0 0 chr18 40032497 40032545 -45956389 + MLT1I LTR MaLR 3 50 -359 199 415 24 0 chr18 40033336 40033418 -45955516 - L2 LINE L2 -2 3311 3228 291 278 87 35 chr18 40033579 40033694 -45955240 + L2 LINE L2 3193 3313 0 217 329 118 13 chr18 40033876 40034028 -45954906 - MIR SINE MIR -18 244 77 488 45 15 0 chr18 40034508 40034574 -45954360 - MER41A LTR ERV1 -88 466 400 466 207 85 89 chr18 40034584 40034830 -45954104 - L1ME2 LINE L1 -10 6154 5910 5795 199 53 42 chr18 40034857 40035523 -45953411 + L1MA9 LINE L1 3848 4505 -1807 1948 152 0 3 chr18 40035523 40035833 -45953101 + AluSx SINE Alu 3 311 -1 5795 199 53 42 chr18 40035833 40036607 -45952327 + L1MA9 LINE L1 4505 5269 -1043 239 53 0 26 chr18 40036607 40036645 -45952289 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 5795 199 53 42 chr18 40036645 40037507 -45951427 + L1MA9 LINE L1 5269 6155 -157 241 200 0 0 chr18 40037512 40037557 -45951377 + L1MA9 LINE L1 6227 6271 -41 1761 225 96 25 chr18 40037595 40037720 -45951214 + L1MCa LINE L1 1770 1885 -4541 3413 50 5 0 chr18 40037720 40038160 -45950774 + L1PA4 LINE L1 5710 6151 -4 1761 225 96 25 chr18 40038160 40039123 -45949811 + L1MCa LINE L1 1885 3157 -3269 629 213 0 0 chr18 40039135 40039287 -45949647 + FLAM_C SINE Alu 10 161 0 732 237 65 23 chr18 40039330 40039638 -45949296 + L1MCa LINE L1 3166 3486 -2940 1655 142 27 19 chr18 40039647 40039907 -45949027 + AluSx SINE Alu 6 267 -45 597 256 109 44 chr18 40039909 40040368 -45948566 - L1MEc LINE L1 -3591 2835 2386 8821 181 140 31 chr18 40040369 40041313 -45947621 - L1MCa LINE L1 -3886 2542 1702 206 0 69 0 chr18 40041313 40041342 -45947592 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 8821 181 140 31 chr18 40041342 40041687 -45947247 - L1MCa LINE L1 -4726 1702 1396 225 0 0 0 chr18 40041687 40041712 -45947222 + (TC)n Simple_repeat Simple_repeat 2 26 0 8821 181 140 31 chr18 40041712 40042102 -45946832 - L1MCa LINE L1 -5032 1396 1050 213 39 0 0 chr18 40042102 40042128 -45946806 + (TTG)n Simple_repeat Simple_repeat 2 27 0 8821 181 140 31 chr18 40042128 40042426 -45946508 - L1MCa LINE L1 -5378 1050 786 1791 166 0 3 chr18 40042426 40042727 -45946207 - AluSx SINE Alu -12 300 1 8821 181 140 31 chr18 40042727 40043031 -45945903 - L1MCa LINE L1 -5642 786 5 23 33 0 0 chr18 40043052 40043082 -45945852 + AT_rich Low_complexity Low_complexity 1 30 0 1604 117 0 0 chr18 40043088 40043310 -45945624 + AluSg/x SINE Alu 81 302 -8 1026 289 46 67 chr18 40043317 40044791 -45944143 - L1ME LINE L1 -4267 2558 1057 284 256 85 12 chr18 40045583 40045665 -45943269 - MIR SINE MIR -87 175 88 194 226 107 12 chr18 40045700 40045784 -45943150 + MER5C DNA MER1_type 198 289 -35 1725 173 8 64 chr18 40045936 40046014 -45942920 + MER47A DNA MER2_type 1 82 -2241 2186 89 0 0 chr18 40046014 40046338 -45942596 + AluY SINE Alu 1 324 0 1725 173 8 64 chr18 40046338 40046646 -45942288 + MER47A DNA MER2_type 82 366 0 330 45 0 0 chr18 40048267 40048311 -45940623 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 209 219 24 0 chr18 40048311 40048352 -45940582 - MIR SINE MIR -7 255 214 1080 231 53 129 chr18 40048678 40049168 -45939766 + MER21B LTR ERV1 12 464 -399 2219 94 7 0 chr18 40049292 40049589 -45939345 - AluSg SINE Alu -11 299 1 2106 127 3 0 chr18 40050136 40050436 -45938498 - AluSg SINE Alu -9 301 1 200 35 35 0 chr18 40051600 40051629 -45937305 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 2258 82 3 10 chr18 40052241 40052532 -45936402 - AluSp SINE Alu -20 293 5 289 354 20 40 chr18 40053054 40053252 -45935682 + MIR SINE MIR 19 212 -50 248 349 160 11 chr18 40053249 40053524 -45935410 + L2 LINE L2 2995 3310 -3 * 25 31 0 0 chr18 40054084 40054116 -45934818 + AT_rich Low_complexity Low_complexity 1 32 0 555 214 0 0 chr18 40054130 40054228 -45934706 - FLAM_A SINE Alu -25 117 20 21 89 0 0 chr18 40054814 40054870 -45934064 + AT_rich Low_complexity Low_complexity 1 56 0 1366 299 35 15 chr18 40055091 40055572 -45933362 + L1ME1 LINE L1 37 527 -5869 274 164 0 18 chr18 40055572 40055627 -45933307 + MLT1B LTR MaLR 1 54 -336 1121 237 92 22 chr18 40055660 40056107 -45932827 + L1ME1 LINE L1 4082 4559 -1656 * 26022 144 11 15 chr18 40056105 40057931 -45931003 + L1PA8 LINE L1 10 1841 -4646 2200 81 0 53 chr18 40057931 40058251 -45930683 + AluY SINE Alu 1 303 -8 26022 144 11 15 chr18 40058251 40062855 -45926079 + L1PA8 LINE L1 1841 6485 -2 80 30 0 0 chr18 40062925 40063026 -45925908 + AT_rich Low_complexity Low_complexity 1 101 0 625 209 63 32 chr18 40063032 40063190 -45925744 + FRAM SINE Alu 1 155 -21 3158 236 55 16 chr18 40063272 40064639 -45924295 + L1ME1 LINE L1 4821 6228 -7 24 32 0 0 chr18 40064730 40064761 -45924173 + AT_rich Low_complexity Low_complexity 1 31 0 1901 143 3 23 chr18 40065175 40065482 -45923452 - AluSx SINE Alu -7 305 5 187 338 65 0 chr18 40066513 40066590 -45922344 - L2 LINE L2 -8 3305 3224 1638 26 10 0 chr18 40067263 40067457 -45921477 + L1PA3 LINE L1 5959 6154 -1 22 56 0 0 chr18 40067583 40067619 -45921315 + AT_rich Low_complexity Low_complexity 1 36 0 259 203 25 0 chr18 40067627 40067706 -45921228 + (TATATG)n Simple_repeat Simple_repeat 4 84 0 225 186 34 0 chr18 40067707 40067766 -45921168 - LTR66 LTR ERVL -172 438 378 1673 170 3 42 chr18 40068150 40068456 -45920478 + AluJo SINE Alu 3 296 -16 292 271 93 28 chr18 40068583 40068690 -45920244 - L2 LINE L2 -1 3271 3158 24 0 0 0 chr18 40068859 40068883 -45920051 + AT_rich Low_complexity Low_complexity 1 24 0 290 170 0 0 chr18 40069042 40069089 -45919845 + AluJb SINE Alu 194 240 -62 2057 103 57 0 chr18 40069132 40069414 -45919520 + AluSc SINE Alu 1 298 -11 4924 208 52 42 chr18 40070264 40071704 -45917230 + Charlie1a DNA MER1_type 1 1454 -1 361 357 58 17 chr18 40071743 40071984 -45916950 + MIR SINE MIR 12 262 0 188 74 37 37 chr18 40071984 40072038 -45916896 + (TA)n Simple_repeat Simple_repeat 1 54 0 29 0 0 0 chr18 40072104 40072133 -45916801 + AT_rich Low_complexity Low_complexity 1 29 0 821 348 39 21 chr18 40073123 40073801 -45915133 + L2 LINE L2 2579 3272 0 222 290 0 0 chr18 40074319 40074381 -45914553 + CT-rich Low_complexity Low_complexity 2 63 0 471 176 24 0 chr18 40075513 40075638 -45913296 + (TA)n Simple_repeat Simple_repeat 1 128 0 432 184 0 0 chr18 40075851 40075954 -45912980 + (TA)n Simple_repeat Simple_repeat 1 103 0 364 357 16 0 chr18 40075955 40076084 -45912850 - L2 LINE L2 -1 3312 3182 28 29 0 0 chr18 40076931 40076966 -45911968 + AT_rich Low_complexity Low_complexity 1 35 0 375 157 0 0 chr18 40077894 40077964 -45910970 + GA-rich Low_complexity Low_complexity 1 70 0 578 276 27 32 chr18 40078379 40078564 -45910370 - L2 LINE L2 -3 3310 3127 523 313 30 30 chr18 40079602 40079864 -45909070 - MIR SINE MIR 0 262 1 1218 157 44 0 chr18 40180476 40180680 -45808254 + AluJb SINE Alu 85 297 -15 558 132 0 0 chr18 40180918 40180994 -45807940 - FLAM_A SINE Alu -24 118 43 1248 121 0 0 chr18 40181561 40181743 -45807191 - AluY SINE Alu -11 300 119 375 329 106 18 chr18 40181875 40182045 -45806889 + L1MB5 LINE L1 5054 5238 -908 341 215 158 32 chr18 40182053 40182211 -45806723 + L1MB5 LINE L1 5255 5432 -2376 741 268 49 4 chr18 40182373 40182619 -45806315 - LTR40b LTR ERVL -10 452 196 255 231 51 39 chr18 40183367 40183445 -45805489 + LTR40c LTR ERVL 113 191 -274 463 246 96 23 chr18 40183709 40184059 -45804875 - MER77 LTR ERV1 -154 451 1 23 0 0 0 chr18 40184245 40184268 -45804666 + AT_rich Low_complexity Low_complexity 1 23 0 2316 84 0 0 chr18 40184270 40184567 -45804367 + AluY SINE Alu 1 297 -14 201 381 0 0 chr18 40184952 40185112 -45803822 + G-rich Low_complexity Low_complexity 1 160 0 2574 216 44 0 chr18 40185430 40186018 -45802916 + L1MB5 LINE L1 5552 6165 -9 2309 97 0 0 chr18 40186034 40186345 -45802589 + AluSq SINE Alu 1 311 -2 929 108 0 0 chr18 40187300 40187429 -45801505 - AluSp/q SINE Alu -3 310 182 2046 134 0 34 chr18 40187540 40187945 -45800989 + AluSg SINE Alu 1 394 0 207 349 128 0 chr18 40189186 40189272 -45799662 + MIR SINE MIR 48 144 -118 497 272 45 54 chr18 40189921 40190106 -45798828 - L2 LINE L2 -15 3298 3114 1886 160 3 13 chr18 40190106 40190418 -45798516 + AluJb SINE Alu 1 309 -3 497 272 45 54 chr18 40190418 40190456 -45798478 - L2 LINE L2 -199 3114 3077 198 0 0 0 chr18 40191462 40191484 -45797450 + (A)n Simple_repeat Simple_repeat 1 22 0 280 128 0 0 chr18 40191506 40191553 -45797381 - MADE1 DNA Mariner -33 47 1 312 273 33 8 chr18 40191880 40192001 -45796933 - L2 LINE L2 -339 2975 2852 2402 68 0 10 chr18 40192255 40192565 -45796369 - AluY SINE Alu -4 307 1 2570 247 88 13 chr18 40192579 40193502 -45795432 + L1ME1 LINE L1 5167 6161 -5 24 53 0 0 chr18 40196527 40196565 -45792369 + GC_rich Low_complexity Low_complexity 1 38 0 205 278 63 40 chr18 40197742 40197868 -45791066 + L2 LINE L2 2853 2981 -332 1879 126 3 11 chr18 40198073 40198358 -45790576 - AluSx SINE Alu -24 288 6 324 0 0 0 chr18 40201625 40201661 -45787273 + (TG)n Simple_repeat Simple_repeat 1 36 0 195 42 0 0 chr18 40201746 40201770 -45787164 + (TG)n Simple_repeat Simple_repeat 1 24 0 213 39 0 0 chr18 40202046 40202072 -45786862 + (TG)n Simple_repeat Simple_repeat 1 26 0 225 290 0 0 chr18 40203212 40203281 -45785653 - MER20B DNA MER1_type -234 549 481 638 267 117 114 chr18 40203859 40204357 -45784577 - L1MEd LINE L1 -4960 1159 661 732 203 0 8 chr18 40204411 40204544 -45784390 - FLAM_A SINE Alu 0 133 2 473 164 0 25 chr18 40205198 40205357 -45783577 + (TG)n Simple_repeat Simple_repeat 2 156 0 1089 140 38 11 chr18 40209102 40209288 -45779646 - AluSg/x SINE Alu -2 308 118 2294 223 101 13 chr18 40209288 40210142 -45778792 - L1M4 LINE L1 -2980 3166 2238 262 197 16 0 chr18 40212027 40212149 -45776785 + (TG)n Simple_repeat Simple_repeat 1 124 0 387 112 10 92 chr18 40212161 40212357 -45776577 + (TG)n Simple_repeat Simple_repeat 1 180 0 328 246 16 33 chr18 40212423 40212606 -45776328 + (TG)n Simple_repeat Simple_repeat 1 180 0 548 145 0 25 chr18 40212642 40212801 -45776133 + (TG)n Simple_repeat Simple_repeat 2 156 0 207 0 0 0 chr18 40213276 40213299 -45775635 + (A)n Simple_repeat Simple_repeat 1 23 0 280 128 0 0 chr18 40213320 40213367 -45775567 - MADE1 DNA Mariner -33 47 1 257 381 32 23 chr18 40213462 40213680 -45775254 - L2 LINE L2 -199 3073 2854 334 273 75 7 chr18 40213694 40213895 -45775039 - L2 LINE L2 -339 2974 2748 181 275 0 0 chr18 40218215 40218255 -45770679 - MIR3 SINE MIR -17 191 152 237 100 50 0 chr18 40218413 40218453 -45770481 - Charlie3 DNA MER1_type -65 2645 2604 3214 141 17 30 chr18 40219368 40219899 -45769035 - MER1A DNA MER1_type -3 524 1 1029 98 0 14 chr18 40223943 40224086 -45764848 + AluSc SINE Alu 147 287 -22 570 150 46 46 chr18 40224103 40224248 -45764686 - L1M4 LINE L1 -705 5469 5322 2880 196 16 2 chr18 40224248 40224795 -45764139 - L1PB4 LINE L1 0 6858 6304 2898 49 0 0 chr18 40224803 40225152 -45763782 - L1PA4 LINE L1 0 6155 5807 1960 114 19 33 chr18 40225152 40225275 -45763659 - L1PB4 LINE L1 -687 6318 6195 2066 102 58 0 chr18 40225275 40225570 -45763364 - AluSx SINE Alu 0 312 1 1960 114 19 33 chr18 40225570 40225915 -45763019 - L1PB4 LINE L1 -810 6195 5852 908 178 49 11 chr18 40225956 40226141 -45762793 + THE1C LTR MaLR 1 192 -183 1614 189 16 26 chr18 40226219 40226525 -45762409 - AluJo SINE Alu -9 303 1 9367 223 63 53 chr18 40226528 40227403 -45761531 - L1PB4 LINE L1 -1505 5343 4478 1806 154 14 0 chr18 40227403 40227683 -45761251 - AluSx SINE Alu -22 290 7 9367 223 63 53 chr18 40227683 40227889 -45761045 - L1PB4 LINE L1 -2370 4478 4276 2340 66 0 13 chr18 40227889 40228194 -45760740 - AluSc SINE Alu -8 301 1 9367 223 63 53 chr18 40228194 40228628 -45760306 - L1PB4 LINE L1 -2572 4276 3848 2306 136 3 15 chr18 40228628 40228967 -45759967 + MER1B DNA MER1_type 1 335 -2 9367 223 63 53 chr18 40228967 40229283 -45759651 - L1PB4 LINE L1 -3000 3848 3537 2383 89 0 0 chr18 40229283 40229585 -45759349 - AluSg SINE Alu -8 302 1 9367 223 63 53 chr18 40229585 40230173 -45758761 - L1PB4 LINE L1 -3311 3537 2956 2170 123 0 0 chr18 40230173 40230473 -45758461 + AluSx SINE Alu 3 302 -10 9367 223 63 53 chr18 40230473 40233315 -45755619 - L1PB4 LINE L1 -3892 2956 13 1632 186 14 132 chr18 40233321 40233880 -45755054 - L1M4 LINE L1 -810 5336 4844 1208 142 0 26 chr18 40234257 40234447 -45754487 - AluJb SINE Alu -33 279 95 27 0 0 0 chr18 40234450 40234477 -45754457 + AT_rich Low_complexity Low_complexity 1 27 0 385 309 51 6 chr18 40234733 40234908 -45754026 - LTR41 LTR ERVL -590 183 1 1113 286 94 6 chr18 40234941 40235417 -45753517 - L1MEc LINE L1 -4434 1962 1445 871 143 8 0 chr18 40235418 40235551 -45753383 + AluJb SINE Alu 1 134 -178 427 279 53 13 chr18 40235552 40235778 -45753156 - L1MEc LINE L1 -4942 1454 1220 2448 223 62 73 chr18 40235781 40235964 -45752970 - L1M4 LINE L1 -1734 4412 4229 1739 159 3 41 chr18 40235964 40236278 -45752656 - AluJo SINE Alu -10 302 1 2448 223 62 73 chr18 40236278 40237152 -45751782 - L1M4 LINE L1 -1917 4229 3347 1679 183 55 33 chr18 40237152 40237518 -45751416 - MLT1A2 LTR MaLR 0 374 1 225 0 0 0 chr18 40237522 40237547 -45751387 + (TA)n Simple_repeat Simple_repeat 2 26 0 2282 101 0 3 chr18 40237547 40237855 -45751079 - AluSq SINE Alu -6 307 1 2181 125 0 0 chr18 40237861 40238172 -45750762 - AluSx SINE Alu -1 311 1 2448 223 62 73 chr18 40238172 40238244 -45750690 - L1M4 LINE L1 -2806 3340 3281 2066 122 30 0 chr18 40244537 40244840 -45744094 - AluSx SINE Alu 0 312 1 1181 136 0 0 chr18 40245519 40245695 -45743239 + AluSg/x SINE Alu 137 312 0 862 198 19 6 chr18 40246320 40246477 -45742457 - AluJb SINE Alu -14 298 140 684 188 8 0 chr18 40246532 40246649 -45742285 - AluJb SINE Alu -13 299 182 2023 132 7 0 chr18 40246772 40247060 -45741874 + AluSq SINE Alu 1 290 -23 8905 224 63 66 chr18 40247061 40247628 -45741306 + L1MC4 LINE L1 1888 2456 -3779 1673 161 13 32 chr18 40247628 40247938 -45740996 + AluJo SINE Alu 1 304 -8 8905 224 63 66 chr18 40247938 40249679 -45739255 + L1MC4 LINE L1 2456 4202 -2033 2379 78 3 3 chr18 40249679 40249986 -45738948 + AluSg SINE Alu 1 307 -3 8905 224 63 66 chr18 40249986 40250189 -45738745 + L1MC4 LINE L1 4202 4404 -1831 2591 204 40 42 chr18 40250189 40250742 -45738192 + MLT2B3 LTR ERVL 1 552 -2 8905 224 63 66 chr18 40250742 40252565 -45736369 + L1MC4 LINE L1 4404 6217 -18 323 172 78 0 chr18 40252995 40253059 -45735875 + U3 snRNA snRNA 2 70 -147 1073 202 22 15 chr18 40257359 40257631 -45731303 + L1MB5 LINE L1 2593 2866 -3983 1673 223 37 33 chr18 40257751 40258298 -45730636 - L1M4 LINE L1 -1134 5012 4464 3920 221 25 2 chr18 40258770 40259753 -45729181 + L1MB5 LINE L1 5872 6874 -2 818 258 48 98 chr18 40267568 40267968 -45720966 + MLT1B LTR MaLR 3 382 -8 3813 237 82 40 chr18 40267968 40268535 -45720399 + MLT1A2-int LTR MaLR 15 557 -814 2027 99 32 0 chr18 40268535 40268819 -45720115 + AluSg1 SINE Alu 1 293 -16 3813 237 82 40 chr18 40268819 40269540 -45719394 + MLT1A2-int LTR MaLR 557 1357 -14 1547 193 45 58 chr18 40269551 40269930 -45719004 + MLT1A2 LTR MaLR 1 374 0 362 306 17 94 chr18 40271458 40271693 -45717241 + L1MEc LINE L1 1608 1824 -4572 1292 301 95 13 chr18 40271900 40272976 -45715958 + L1MEc LINE L1 2111 3249 -2966 565 231 42 25 chr18 40273045 40273283 -45715651 + L1MEc LINE L1 3402 3643 -2572 2556 237 91 75 chr18 40273294 40274284 -45714650 + L1MC4a LINE L1 6540 7545 -263 282 267 27 0 chr18 40274371 40274446 -45714488 + L1MC4 LINE L1 7965 8041 -1 534 248 153 30 chr18 40278271 40278646 -45710288 - MLT2B2 LTR ERVL -2 513 57 22 35 0 0 chr18 40281176 40281205 -45707729 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr18 40281283 40281304 -45707630 + GC_rich Low_complexity Low_complexity 1 21 0 882 144 0 14 chr18 40285151 40285290 -45703644 + AluJo SINE Alu 1 137 -175 2048 148 0 0 chr18 40287148 40287459 -45701475 - AluSx SINE Alu -1 311 1 232 287 83 46 chr18 40287651 40287759 -45701175 - L2 LINE L2 -1 3271 3160 429 285 51 43 chr18 40288167 40288402 -45700532 - L1M4 LINE L1 -813 5333 5097 247 312 57 7 chr18 40288910 40289051 -45699883 - L1MEd LINE L1 -5733 386 239 1767 136 0 52 chr18 40289264 40289572 -45699362 - AluSx SINE Alu -20 292 1 2390 57 3 13 chr18 40289582 40289896 -45699038 - AluY SINE Alu 0 311 1 399 113 0 0 chr18 40291275 40291346 -45697588 + (CGG)n Simple_repeat Simple_repeat 1 71 0 256 264 80 24 chr18 40292911 40293036 -45695898 + L1ME4a LINE L1 5990 6121 0 2470 54 0 16 chr18 40293405 40293721 -45695213 - AluY SINE Alu 0 311 1 2213 109 3 3 chr18 40294641 40294953 -45693981 + AluSx SINE Alu 1 312 0 2988 203 45 3 chr18 40297345 40297996 -45690938 - L1MB3 LINE L1 -2 6417 5740 * 10537 178 63 35 chr18 40297975 40298030 -45690904 - L1MB3 LINE L1 -3180 3202 3150 2183 85 0 0 chr18 40298030 40298338 -45690596 + AluSq SINE Alu 1 308 0 10537 178 63 35 chr18 40298338 40301369 -45687565 - L1MB3 LINE L1 -3232 3150 25 266 338 54 22 chr18 40302377 40302599 -45686335 - MIR SINE MIR -29 233 5 180 0 0 0 chr18 40302935 40302955 -45685979 + (T)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr18 40303711 40303739 -45685195 + AT_rich Low_complexity Low_complexity 1 28 0 1624 71 0 5 chr18 40303759 40303970 -45684964 - AluY SINE Alu -101 210 1 982 227 14 0 chr18 40304167 40304374 -45684560 + MER2 DNA MER2_type 1 210 -135 21 0 0 0 chr18 40304375 40304396 -45684538 + AT_rich Low_complexity Low_complexity 1 21 0 255 221 59 0 chr18 40304499 40304567 -45684367 - L2 LINE L2 -18 3295 3224 652 138 11 0 chr18 40306477 40306571 -45682363 - AluSg/x SINE Alu -19 291 197 919 141 7 0 chr18 40307086 40307376 -45681558 + (TCCA)n Simple_repeat Simple_repeat 1 292 0 631 198 25 0 chr18 40307441 40307562 -45681372 + MER63 DNA MER1_type 1 750 -312 1417 60 6 6 chr18 40308048 40308231 -45680703 + AluY SINE Alu 97 279 -32 207 0 0 0 chr18 40308233 40308256 -45680678 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 27 29 0 0 chr18 40308907 40308941 -45679993 + AT_rich Low_complexity Low_complexity 1 34 0 390 168 22 0 chr18 40312645 40312782 -45676152 + (CGTG)n Simple_repeat Simple_repeat 4 143 0 2154 101 7 7 chr18 40314104 40314401 -45674533 + AluSx SINE Alu 1 297 -15 259 285 43 101 chr18 40318777 40319054 -45669880 + LTR41 LTR ERVL 510 770 -3 416 345 47 66 chr18 40319055 40319356 -45669578 - L1MEd LINE L1 -5189 930 636 2296 85 0 0 chr18 40319553 40319859 -45669075 - AluSg SINE Alu -4 306 1 1669 113 0 0 chr18 40320903 40321132 -45667802 + AluSg/x SINE Alu 81 309 -1 255 244 259 5 chr18 40321141 40321338 -45667596 - L1 LINE L1 -2207 3939 3693 352 303 77 26 chr18 40321523 40321678 -45667256 - L1 LINE L1 -2648 3498 3336 315 290 34 17 chr18 40322149 40322378 -45666556 - L1ME LINE L1 -638 5483 5265 1181 245 42 36 chr18 40322602 40323075 -45665859 + L1ME2 LINE L1 3056 3531 -2615 1149 226 36 39 chr18 40323073 40323330 -45665604 + L1ME2 LINE L1 4395 4652 -1494 * 1830 140 13 48 chr18 40323330 40323644 -45665290 + AluJo SINE Alu 1 303 -9 1149 226 36 39 chr18 40323644 40323745 -45665189 + L1ME2 LINE L1 4652 4752 -1394 2253 268 80 10 chr18 40323792 40324873 -45664061 + L1ME2 LINE L1 4865 6023 -141 874 365 31 15 chr18 40324872 40325608 -45663326 + L1M4 LINE L1 3356 4103 -2043 * 742 313 0 0 chr18 40325643 40325838 -45663096 + MER58A DNA MER1_type 28 222 -2 646 346 91 22 chr18 40325847 40326005 -45662929 + L1M4 LINE L1 4109 4255 -1891 2083 95 10 14 chr18 40326005 40326322 -45662612 + AluSq SINE Alu 1 313 0 646 346 91 22 chr18 40326322 40326920 -45662014 + L1M4 LINE L1 4255 4917 -1229 350 404 43 18 chr18 40326977 40327304 -45661630 - L1M4 LINE L1 -2258 3888 3554 257 293 61 0 chr18 40328020 40328119 -45660815 - LTR37A LTR ERV1 -20 406 302 2295 83 3 7 chr18 40330186 40330487 -45658447 - AluSx SINE Alu -12 300 1 982 218 125 0 chr18 40330498 40330787 -45658147 - L1MB3 LINE L1 -42 6141 5817 1834 223 23 56 chr18 40330800 40331320 -45657614 - L1MA8 LINE L1 -291 6000 5498 285 160 0 0 chr18 40331327 40331377 -45657557 - L1MB3 LINE L1 -757 5547 5498 285 160 0 0 chr18 40331384 40331434 -45657500 - L1MB3 LINE L1 -757 5547 5498 297 160 0 0 chr18 40331441 40331491 -45657443 - L1MB3 LINE L1 -758 5547 5498 1028 238 45 2 chr18 40331498 40331916 -45657018 - L1M2 LINE L1 -744 5402 5115 355 266 62 0 chr18 40331921 40332034 -45656900 - L1M3 LINE L1 -352 5819 5700 305 299 13 25 chr18 40334147 40334287 -45654647 + MIR SINE MIR 44 181 -59 2173 103 33 0 chr18 40339952 40340253 -45648681 + AluSx SINE Alu 1 311 -1 334 371 14 68 chr18 40341133 40341413 -45647521 - HAL1 LINE L1 -32 2475 2211 321 223 29 43 chr18 40341416 40341555 -45647379 + (CCCTG)n Simple_repeat Simple_repeat 5 141 0 204 177 55 37 chr18 40341571 40341735 -45647199 + (CCCTG)n Simple_repeat Simple_repeat 5 171 0 429 205 0 76 chr18 40341736 40341921 -45647013 + (CCCCG)n Simple_repeat Simple_repeat 2 172 0 317 302 0 0 chr18 40342406 40342502 -45646432 - HAL1 LINE L1 -1015 1492 1397 559 345 33 86 chr18 40342590 40342881 -45646053 - HAL1 LINE L1 -1291 1216 946 1283 201 34 0 chr18 40342881 40343120 -45645814 - L1MA2 LINE L1 0 6304 6058 559 345 33 86 chr18 40343120 40343187 -45645747 - HAL1 LINE L1 -1561 946 877 391 341 17 23 chr18 40343195 40343401 -45645533 + CT-rich Low_complexity Low_complexity 1 204 0 256 319 92 18 chr18 40344750 40344913 -45644021 + MIR SINE MIR 56 230 -32 795 209 199 67 chr18 40345060 40345466 -45643468 + MLT1C LTR MaLR 6 465 -2 301 299 112 48 chr18 40345835 40346129 -45642805 + L1ME LINE L1 185 497 -5573 1807 247 77 13 chr18 40346428 40346480 -45642454 + L1ME LINE L1 579 626 -5454 1663 223 94 28 chr18 40346480 40346950 -45641984 - MLT1D LTR MaLR -4 501 1 1807 247 77 13 chr18 40346950 40347759 -45641175 + L1ME LINE L1 626 1464 -4616 1762 196 6 6 chr18 40347759 40348071 -45640863 + AluJo SINE Alu 1 312 0 697 253 45 5 chr18 40349234 40349432 -45639502 + L1MA10 LINE L1 6119 6324 -10 365 342 81 52 chr18 40350170 40350515 -45638419 - L1ME3A LINE L1 -134 6036 5682 2885 171 36 2 chr18 40350701 40351179 -45637755 + LOR1a LTR ERV1 4 497 0 1238 310 47 19 chr18 40351892 40352878 -45636056 - L1ME1 LINE L1 -172 5994 4976 332 324 65 6 chr18 40354078 40354248 -45634686 + L2 LINE L2 2702 2881 -433 2207 122 0 0 chr18 40354357 40354669 -45634265 + AluSx SINE Alu 1 312 0 277 243 9 37 chr18 40354675 40354782 -45634152 + L1ME LINE L1 5296 5399 -763 250 268 78 42 chr18 40355040 40355182 -45633752 + L1ME LINE L1 5677 5823 -347 189 0 0 0 chr18 40358290 40358311 -45630623 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 311 65 22 0 chr18 40358587 40358633 -45630301 + (TA)n Simple_repeat Simple_repeat 2 48 0 5120 147 78 56 chr18 40461437 40461736 -45527198 - Tigger3b DNA MER2_type -1798 1230 939 2326 109 0 3 chr18 40461736 40462047 -45526887 + AluSx SINE Alu 1 310 -2 5120 147 78 56 chr18 40462047 40462601 -45526333 - Tigger3b DNA MER2_type -2089 939 342 2551 71 0 0 chr18 40462601 40462912 -45526022 + AluY SINE Alu 1 311 0 5120 147 78 56 chr18 40462912 40463216 -45525718 - Tigger3b DNA MER2_type -2686 342 46 506 68 96 0 chr18 40463353 40463426 -45525508 - MADE1 DNA Mariner 0 80 1 222 348 105 54 chr18 40463873 40464169 -45524765 + L2 LINE L2 2962 3272 0 27 29 0 0 chr18 40464431 40464465 -45524469 + AT_rich Low_complexity Low_complexity 1 34 0 2331 108 0 3 chr18 40465617 40465931 -45523003 + AluSq SINE Alu 1 313 0 865 177 80 0 chr18 40466694 40466869 -45522065 - MER5A DNA MER1_type 0 189 1 530 315 35 15 chr18 40467016 40467213 -45521721 - MIR SINE MIR -13 249 49 251 268 27 27 chr18 40467712 40467824 -45521110 + (TA)n Simple_repeat Simple_repeat 2 113 0 2015 97 20 33 chr18 40467924 40468224 -45520710 - AluSx SINE Alu -16 296 1 684 283 54 91 chr18 40468607 40468957 -45519977 + MLT1J2 LTR MaLR 38 383 -67 323 300 20 40 chr18 40469526 40469626 -45519308 - L2 LINE L2 -252 3020 2923 15043 205 32 16 chr18 40469960 40472549 -45516385 + L1PB1 LINE L1 3 2549 -4318 210 118 0 0 chr18 40472549 40472583 -45516351 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 15043 205 32 16 chr18 40472583 40473678 -45515256 + L1PB1 LINE L1 2549 3625 -3242 213 65 0 0 chr18 40473678 40473709 -45515225 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 15043 205 32 16 chr18 40473709 40476294 -45512640 + L1PB1 LINE L1 3625 6496 -371 321 118 0 0 chr18 40476294 40476345 -45512589 + (TG)n Simple_repeat Simple_repeat 1 51 0 329 643 0 0 chr18 40476358 40476529 -45512405 + (CA)n Simple_repeat Simple_repeat 2 172 0 226 0 0 33 chr18 40476529 40476547 -45512387 + (TA)n Simple_repeat Simple_repeat 2 20 -10 2444 118 3 0 chr18 40476547 40476910 -45512024 + L1PB1 LINE L1 6498 6861 -6 226 0 0 33 chr18 40476910 40476921 -45512013 + (TA)n Simple_repeat Simple_repeat 20 30 0 210 309 21 32 chr18 40476930 40477024 -45511910 - L2 LINE L2 -234 3038 2946 205 264 32 136 chr18 40477405 40477530 -45511404 + L2 LINE L2 3158 3269 -3 321 352 60 25 chr18 40478759 40478958 -45509976 - MIR SINE MIR -30 232 27 181 267 75 67 chr18 40481746 40481866 -45507068 - L2 LINE L2 -18 3295 3175 361 286 71 21 chr18 40482797 40482937 -45505997 - MIR3 SINE MIR -3 205 59 3370 106 12 10 chr18 40484033 40484526 -45504408 + L1PA11 LINE L1 5669 6162 -12 351 314 162 24 chr18 40485075 40485409 -45503525 + L3 LINE CR1 966 1345 -232 2113 108 4 4 chr18 40485603 40485882 -45503052 + AluSg SINE Alu 1 279 -31 186 71 0 0 chr18 40485885 40485913 -45503021 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 25 51 0 0 chr18 40486702 40486741 -45502193 + AT_rich Low_complexity Low_complexity 1 39 0 571 226 132 104 chr18 40487001 40487404 -45501530 + L1MC3 LINE L1 20 433 -5993 4905 223 41 30 chr18 40487410 40488025 -45500909 + L1MC3 LINE L1 4927 4440 -1986 2019 141 78 9 chr18 40488025 40488372 -45500562 + THE1C LTR MaLR 1 371 -4 4905 223 41 30 chr18 40488372 40489629 -45499305 + L1MC3 LINE L1 4439 5681 -745 3780 136 0 2 chr18 40489622 40490216 -45498718 - L1P LINE L1 -4260 1886 1294 * 14965 105 14 11 chr18 40490215 40492418 -45496516 + L1MC3 LINE L1 2524 6534 -1251 5067 43 3 3 chr18 40492418 40493040 -45495894 + L1PA7 LINE L1 5527 6151 -3 14965 105 14 11 chr18 40493040 40493266 -45495668 + L1MC3 LINE L1 6534 6758 -1027 203 130 22 22 chr18 40493268 40493314 -45495620 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 1606 163 45 0 chr18 40493326 40493435 -45495499 + AluSx SINE Alu 13 116 -196 212 0 0 35 chr18 40493435 40493464 -45495470 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 1606 163 45 0 chr18 40493464 40493618 -45495316 + AluSx SINE Alu 116 288 -24 348 234 0 11 chr18 40493638 40493738 -45495196 + L1MC3 LINE L1 6774 6860 -925 757 118 0 28 chr18 40493738 40493882 -45495052 + (GAAA)n Simple_repeat Simple_repeat 3 142 0 3802 210 43 9 chr18 40493939 40494831 -45494103 + L1MC3 LINE L1 6856 7777 -8 28 48 0 0 chr18 40495658 40495700 -45493234 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr18 40496033 40496061 -45492873 + AT_rich Low_complexity Low_complexity 1 28 0 2624 203 48 87 chr18 40496288 40496585 -45492349 + MER21B LTR ERV1 1 308 -555 1896 138 11 0 chr18 40496585 40496909 -45492025 + AluSq SINE Alu 7 333 0 2624 203 48 87 chr18 40496909 40497378 -45491556 + MER21B LTR ERV1 308 738 -125 198 171 0 0 chr18 40497935 40497976 -45490958 + (CA)n Simple_repeat Simple_repeat 2 42 0 1801 130 3 57 chr18 40498262 40498563 -45490371 + AluSx SINE Alu 14 298 -14 255 226 29 49 chr18 40498602 40498704 -45490230 + MLT1J2 LTR MaLR 338 437 -13 384 286 97 17 chr18 40499524 40499699 -45489235 + MLT1J2 LTR MaLR 254 442 -8 515 286 73 34 chr18 40499941 40500175 -45488759 + MLT1H LTR MaLR 1 243 -306 1279 294 42 39 chr18 40500510 40501055 -45487879 + MLT1H LTR MaLR 1 547 -2 885 314 84 24 chr18 40501830 40502247 -45486687 + L2 LINE L2 2033 2474 -840 325 319 129 10 chr18 40502434 40502729 -45486205 + HAL1 LINE L1 1501 1830 -677 329 116 14 0 chr18 40502803 40502872 -45486062 + (TAGA)n Simple_repeat Simple_repeat 3 72 0 215 211 0 0 chr18 40502889 40502927 -45486007 + polypurine Low_complexity Low_complexity 4 41 0 1291 181 109 15 chr18 40503805 40504070 -45484864 + MSTA LTR MaLR 1 290 -138 680 199 60 48 chr18 40504087 40504128 -45484806 - MLT1B LTR MaLR -217 173 134 2176 169 43 10 chr18 40504128 40504542 -45484392 + MSTA LTR MaLR 1 428 0 680 199 60 48 chr18 40504542 40504666 -45484268 - MLT1B LTR MaLR -256 134 6 423 276 104 0 chr18 40504760 40504894 -45484040 + MIR SINE MIR 61 208 -54 334 254 59 42 chr18 40505758 40505876 -45483058 - L1ME3A LINE L1 -191 5979 5860 425 277 90 97 chr18 40505948 40506483 -45482451 - L1MC4a LINE L1 -45 6076 5546 187 309 0 29 chr18 40506845 40506913 -45482021 + MIR3 SINE MIR 113 178 -30 1393 223 3 49 chr18 40506913 40507240 -45481694 + AluJo SINE Alu 1 312 0 476 179 28 28 chr18 40507301 40507407 -45481527 + MLT2D LTR ERVL 1 106 -308 638 93 6 3 chr18 40507407 40507659 -45481275 + AluY SINE Alu 1 322 0 1471 170 80 18 chr18 40507659 40507935 -45480999 + MLT2D LTR ERVL 102 394 -20 247 91 0 0 chr18 40507981 40508014 -45480920 + MLT2D LTR ERVL 483 515 0 207 336 0 86 chr18 40508358 40508486 -45480448 + L2 LINE L2 3179 3295 -18 268 177 48 16 chr18 40510805 40510867 -45478067 - MER2 DNA MER2_type 0 345 282 * 610 284 34 28 chr18 40510842 40511018 -45477916 - MER8 DNA MER2_type -61 178 2 1977 155 0 7 chr18 40511341 40511650 -45477284 - AluSx SINE Alu -2 310 4 426 346 63 29 chr18 40511669 40511803 -45477131 - MIR SINE MIR -31 231 86 2628 112 5 3 chr18 40511803 40512177 -45476757 + THE1C LTR MaLR 1 375 0 426 346 63 29 chr18 40512177 40512247 -45476687 - MIR SINE MIR -176 86 20 23 54 0 0 chr18 40512531 40512568 -45476366 + AT_rich Low_complexity Low_complexity 1 37 0 219 146 0 0 chr18 40512787 40512828 -45476106 + (CA)n Simple_repeat Simple_repeat 1 41 0 543 326 64 49 chr18 40513623 40514205 -45474729 - L2 LINE L2 0 3313 2718 29 28 0 0 chr18 40514414 40514450 -45474484 + AT_rich Low_complexity Low_complexity 1 36 0 299 347 8 25 chr18 40515331 40515452 -45473482 + MIR3 SINE MIR 53 171 -37 206 108 0 54 chr18 40515484 40515521 -45473413 + (TTAA)n Simple_repeat Simple_repeat 1 35 0 1402 167 33 51 chr18 40515523 40515799 -45473135 - AluJo SINE Alu -18 294 24 494 355 17 12 chr18 40518117 40518289 -45470645 - MIR SINE MIR -70 192 20 1720 116 108 0 chr18 40518722 40519029 -45469905 - AluSq SINE Alu 0 313 1 2376 81 3 3 chr18 40519062 40519372 -45469562 + AluY SINE Alu 1 310 -1 447 236 39 24 chr18 40519378 40519505 -45469429 + MER5B DNA MER1_type 50 178 0 2445 56 0 0 chr18 40519554 40519842 -45469092 - AluY SINE Alu -10 301 14 296 325 172 0 chr18 40519920 40520083 -45468851 + MIR SINE MIR 53 243 -19 247 323 60 38 chr18 40520111 40520244 -45468690 - MIR3 SINE MIR -54 154 19 405 0 0 0 chr18 40520402 40520447 -45468487 + (CA)n Simple_repeat Simple_repeat 2 46 0 478 213 0 37 chr18 40520447 40520555 -45468379 - FLAM_A SINE Alu -36 106 3 1343 161 21 4 chr18 40520767 40521010 -45467924 - L1PA16 LINE L1 0 6166 5920 571 298 65 9 chr18 40521447 40521662 -45467272 + MIR SINE MIR 34 260 -2 601 44 11 11 chr18 40521921 40522011 -45466923 + (TCTA)n Simple_repeat Simple_repeat 2 91 0 271 343 67 22 chr18 40522026 40522160 -45466774 - MIR3 SINE MIR -6 202 63 364 263 26 27 chr18 40522510 40522654 -45466280 + L1MC4 LINE L1 6585 6703 -1339 237 635 11 0 chr18 40522657 40522835 -45466099 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 256 370 62 12 chr18 40522862 40523024 -45465910 + MIR3 SINE MIR 23 192 -16 742 264 5 47 chr18 40523160 40523353 -45465581 - MIR3 SINE MIR -3 205 21 215 270 0 14 chr18 40524345 40524419 -45464515 + L2 LINE L2 2297 2369 -945 226 266 92 98 chr18 40524839 40525023 -45463911 + MER5A DNA MER1_type 6 188 -1 207 0 0 0 chr18 40525482 40525505 -45463429 + (A)n Simple_repeat Simple_repeat 1 23 0 418 365 39 13 chr18 40525505 40525738 -45463196 + MIR SINE MIR 20 258 -4 387 0 0 0 chr18 40527241 40527284 -45461650 + (TG)n Simple_repeat Simple_repeat 2 44 0 30 0 0 0 chr18 40528561 40528591 -45460343 + AT_rich Low_complexity Low_complexity 1 30 0 365 188 0 0 chr18 40530035 40530099 -45458835 - L2 LINE L2 0 3272 3209 675 256 182 4 chr18 40531540 40531782 -45457152 - Charlie8 DNA MER1_type -2132 285 1 487 263 0 18 chr18 40531809 40531923 -45457011 + FLAM_A SINE Alu 5 116 -17 229 206 0 59 chr18 40531931 40531999 -45456935 + L1MC4 LINE L1 6640 6703 -1339 * 243 196 0 0 chr18 40531959 40532005 -45456929 - L1MC4 LINE L1 -1339 6703 6658 189 107 0 0 chr18 40534667 40534695 -45454239 + (TCTCC)n Simple_repeat Simple_repeat 5 32 0 21 82 0 0 chr18 40534978 40535027 -45453907 + AT_rich Low_complexity Low_complexity 1 49 0 23 33 0 0 chr18 40535058 40535088 -45453846 + AT_rich Low_complexity Low_complexity 1 30 0 429 322 72 38 chr18 40535498 40535762 -45453172 - L2 LINE L2 -95 3218 2946 883 312 55 18 chr18 40535764 40536107 -45452827 - L2 LINE L2 -2032 1282 927 3571 196 62 27 chr18 40536137 40536868 -45452066 + MER21B LTR ERV1 107 862 -1 836 142 119 40 chr18 40536878 40537017 -45451917 + L1MA6 LINE L1 3976 4133 -2013 2664 42 0 6 chr18 40537017 40537330 -45451604 + AluY SINE Alu 1 311 0 836 142 119 40 chr18 40537330 40537366 -45451568 + L1MA6 LINE L1 4133 4165 -1981 * 5260 165 12 48 chr18 40537360 40538649 -45450285 + L1MA6 LINE L1 4663 5902 -398 1613 183 0 10 chr18 40538649 40538938 -45449996 - AluJo SINE Alu -26 286 1 5260 165 12 48 chr18 40538938 40539324 -45449610 + L1MA6 LINE L1 5902 6300 0 1066 282 87 28 chr18 40539354 40539918 -45449016 - MER20B DNA MER1_type -152 631 35 213 286 26 26 chr18 40541294 40541371 -45447563 + CT-rich Low_complexity Low_complexity 3 79 0 1846 214 53 58 chr18 40541638 40542312 -45446622 - MER69 DNA AcHobo -10 2516 1846 1048 243 48 32 chr18 40542640 40542953 -45445981 - MER69 DNA AcHobo -869 357 40 225 254 56 42 chr18 40543082 40543153 -45445781 - L3 LINE CR1 -308 1269 1198 423 283 62 58 chr18 40543252 40543583 -45445351 + L1MC/D LINE L1 5472 5803 -359 1056 109 38 38 chr18 40543856 40544119 -45444815 - THE1B LTR MaLR 0 364 1 247 250 0 0 chr18 40544208 40544260 -45444674 + (CA)n Simple_repeat Simple_repeat 1 52 0 35 54 0 0 chr18 40548436 40548492 -45440442 + AT_rich Low_complexity Low_complexity 1 56 0 610 279 97 25 chr18 40548510 40548747 -45440187 - MIR SINE MIR -2 260 7 438 20 0 0 chr18 40548839 40548890 -45440044 + (CA)n Simple_repeat Simple_repeat 2 52 0 288 329 118 19 chr18 40548991 40549152 -45439782 - MIR SINE MIR -13 249 73 22 0 0 0 chr18 40549265 40549287 -45439647 + AT_rich Low_complexity Low_complexity 1 22 0 180 200 0 0 chr18 40549935 40549975 -45438959 + GA-rich Low_complexity Low_complexity 2 41 0 206 261 116 0 chr18 40550354 40550423 -45438511 - MIR SINE MIR -77 131 55 194 103 0 51 chr18 40551523 40551562 -45437372 + (AATAG)n Simple_repeat Simple_repeat 3 39 0 3046 189 13 74 chr18 40552129 40552842 -45436092 + LTR8 LTR ERV1 1 669 -22 501 367 80 26 chr18 40555560 40556274 -45432660 - L2 LINE L2 0 3313 2491 1471 180 29 47 chr18 40556672 40556952 -45431982 + AluJb SINE Alu 13 643 0 572 232 6 6 chr18 40556952 40557308 -45431626 + GA-rich Low_complexity Low_complexity 3 180 0 194 250 0 0 chr18 40557622 40557670 -45431264 - L2 LINE L2 0 3272 3225 306 0 0 0 chr18 40557946 40557980 -45430954 + (CA)n Simple_repeat Simple_repeat 2 35 0 247 407 105 0 chr18 40560958 40561130 -45427804 + MIR3 SINE MIR 19 208 0 1682 159 0 20 chr18 40561290 40561585 -45427349 - AluSq SINE Alu -14 299 11 2064 77 54 34 chr18 40565561 40565859 -45423075 + AluSx SINE Alu 3 306 -6 2089 128 3 3 chr18 40567202 40567508 -45421426 - AluSq SINE Alu -7 306 1 2336 84 0 7 chr18 40567550 40567848 -45421086 - AluY SINE Alu -15 296 1 192 97 0 0 chr18 40568319 40568350 -45420584 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 347 248 66 16 chr18 40569693 40569814 -45419120 - L1MCc LINE L1 -5514 909 783 841 289 60 52 chr18 40569961 40570480 -45418454 - L1MCc LINE L1 -5817 606 84 1557 139 0 0 chr18 40570512 40570727 -45418207 - AluSx SINE Alu -97 215 1 723 282 27 27 chr18 40570728 40571100 -45417834 - L1M4 LINE L1 -871 5275 4904 737 265 64 48 chr18 40571133 40571525 -45417409 + L1ME3 LINE L1 5266 5663 -499 494 204 10 10 chr18 40571687 40571785 -45417149 + LTR47A LTR ERVL 355 452 0 376 272 60 80 chr18 40571785 40572086 -45416848 + L1ME3 LINE L1 5661 5955 -207 344 242 40 0 chr18 40572482 40572581 -45416353 + LTR67 LTR ERVL 435 537 -20 764 208 12 0 chr18 40573110 40573278 -45415656 + LTR53 LTR ERVL 189 358 -161 401 221 18 53 chr18 40573433 40573546 -45415388 + LTR53 LTR ERVL 339 447 -72 480 264 44 41 chr18 40573859 40574095 -45414839 + MLT1K LTR MaLR 334 561 -27 4218 131 43 48 chr18 40574421 40575210 -45413724 + LTR1 LTR ERV1 1 785 0 205 314 35 23 chr18 40576186 40576272 -45412662 + L2 LINE L2 3227 3313 0 220 71 0 119 chr18 40578094 40578108 -45410826 - L2 LINE L2 -11 3302 3266 220 71 0 0 chr18 40578108 40578136 -45410798 - MIR SINE MIR -14 248 221 214 365 9 28 chr18 40578179 40578286 -45410648 + L2 LINE L2 2915 3019 -253 23 0 0 0 chr18 40579243 40579266 -45409668 + AT_rich Low_complexity Low_complexity 1 23 0 295 260 0 39 chr18 40579857 40579934 -45409000 - L2 LINE L2 -8 3305 3232 29 0 0 0 chr18 40579941 40579970 -45408964 + AT_rich Low_complexity Low_complexity 1 29 0 217 295 25 49 chr18 40580147 40580269 -45408665 - MIR SINE MIR -67 195 77 193 75 50 0 chr18 40580528 40580568 -45408366 + (TA)n Simple_repeat Simple_repeat 1 42 0 203 409 67 0 chr18 40581538 40581687 -45407247 + MIR3 SINE MIR 2 160 -48 1641 148 52 0 chr18 40581937 40582187 -45406747 + AluSg SINE Alu 32 294 -16 852 270 10 0 chr18 40582679 40582883 -45406051 - MIR SINE MIR -46 216 11 1999 128 3 7 chr18 40583460 40583757 -45405177 - AluSx SINE Alu -15 297 2 1750 311 35 18 chr18 40583910 40584610 -45404324 - L1ME3A LINE L1 -37 6116 5398 2190 121 7 0 chr18 40584610 40584916 -45404018 - AluSx SINE Alu -3 309 2 1750 311 35 18 chr18 40584916 40585045 -45403889 - L1ME3A LINE L1 -755 5398 5273 382 260 39 13 chr18 40585124 40585278 -45403656 - L1ME3A LINE L1 -872 5257 5100 33 0 0 0 chr18 40585433 40585466 -45403468 + AT_rich Low_complexity Low_complexity 1 33 0 1441 130 67 0 chr18 40585526 40585765 -45403169 - L1PB3 LINE L1 -7 6147 5893 355 277 35 15 chr18 40585995 40586197 -45402737 - L1ME3A LINE L1 -1674 4455 4250 1949 132 7 10 chr18 40586224 40586519 -45402415 + AluSq SINE Alu 1 294 -19 2536 230 55 14 chr18 40586551 40587138 -45401796 - MER82 DNA MER2_type -37 616 6 4092 243 62 42 chr18 40587312 40588217 -45400717 + L1M4 LINE L1 319 1281 -5365 1397 202 0 73 chr18 40588217 40588544 -45400390 + AluJo SINE Alu 1 303 -9 4092 243 62 42 chr18 40588544 40589364 -45399570 + L1M4 LINE L1 1281 2083 -4563 258 32 0 0 chr18 40589369 40589400 -45399534 + (TG)n Simple_repeat Simple_repeat 2 32 0 210 234 47 0 chr18 40589408 40589472 -45399462 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 390 242 71 59 chr18 40589781 40590120 -45398814 - L1ME3A LINE L1 -4001 2309 1967 225 305 126 0 chr18 40590326 40590421 -45398513 + MER58 DNA MER1_type 7 113 -228 289 313 22 0 chr18 40590499 40590633 -45398301 - L1ME3A LINE L1 -4579 1731 1595 343 281 76 38 chr18 40590773 40591210 -45397724 - L1MEd LINE L1 -4862 1257 904 288 0 0 0 chr18 40593587 40593619 -45395315 + (TA)n Simple_repeat Simple_repeat 2 33 0 1597 243 74 94 chr18 40595575 40596172 -45392762 - MLT1E LTR MaLR 0 593 9 21 0 0 0 chr18 40596713 40596734 -45392200 + AT_rich Low_complexity Low_complexity 1 21 0 2372 99 0 0 chr18 40599000 40599304 -45389630 + AluSg SINE Alu 1 304 -6 324 191 12 60 chr18 40599428 40599512 -45389422 + L2 LINE L2 3213 3292 -21 771 182 0 0 chr18 40602067 40602188 -45386746 - FLAM_A SINE Alu -12 121 1 2163 154 70 10 chr18 40602318 40602720 -45386214 + MSTB LTR MaLR 1 426 0 1159 43 0 0 chr18 40602946 40603124 -45385810 + L1PA4 LINE L1 5998 6175 0 223 307 67 13 chr18 40604197 40604272 -45384662 + MER91C DNA MER1_type 1 79 -61 431 338 60 70 chr18 40604769 40605496 -45383438 + L2 LINE L2 2507 3269 -3 335 361 64 67 chr18 40605560 40605903 -45383031 + L2 LINE L2 2930 3271 -1 201 328 60 0 chr18 40606396 40606463 -45382471 - L3b LINE CR1 -343 1240 1170 297 244 33 11 chr18 40606573 40606663 -45382271 - MIR3 SINE MIR -4 204 113 1859 62 79 8 chr18 40606760 40607032 -45381902 - AluY SINE Alu 0 312 24 246 220 60 110 chr18 40607717 40607817 -45381117 - MIR SINE MIR -29 233 139 2246 238 51 48 chr18 40607973 40608717 -45380217 + L1ME1 LINE L1 5416 6161 -5 2533 68 0 3 chr18 40609126 40609433 -45379501 + AluY SINE Alu 2 307 -4 180 0 0 0 chr18 40609441 40609461 -45379473 + (A)n Simple_repeat Simple_repeat 1 20 0 25 0 0 0 chr18 40609473 40609498 -45379436 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr18 40609540 40609568 -45379366 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr18 40609689 40609717 -45379217 + AT_rich Low_complexity Low_complexity 1 28 0 28 0 0 0 chr18 40609755 40609783 -45379151 + AT_rich Low_complexity Low_complexity 1 28 0 1282 173 0 5 chr18 40609933 40610147 -45378787 + AluY SINE Alu 95 307 -4 189 0 0 0 chr18 40610155 40610176 -45378758 + (A)n Simple_repeat Simple_repeat 1 21 0 42763 33 22 1 chr18 40611334 40617380 -45371554 + L1PA2 LINE L1 2 6177 0 228 354 25 0 chr18 40617955 40618034 -45370900 + MIR3 SINE MIR 88 168 -40 542 302 99 22 chr18 40618435 40618657 -45370277 - MIR SINE MIR -4 258 20 2477 59 0 10 chr18 40619578 40619885 -45369049 + AluY SINE Alu 2 305 -6 248 0 31 0 chr18 40621485 40621517 -45367417 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 657 302 22 18 chr18 40621890 40622112 -45366822 - MIR SINE MIR -5 257 35 3809 179 26 11 chr18 40622113 40622829 -45366105 + MER50 LTR ERV1 8 734 0 498 322 98 25 chr18 40623809 40624290 -45364644 - LTR33 LTR ERVL -2 519 4 328 366 82 5 chr18 40624320 40624514 -45364420 + MIR SINE MIR 35 243 -19 1674 179 0 17 chr18 40625489 40625779 -45363155 + AluJb SINE Alu 1 285 -27 414 0 0 0 chr18 40625779 40625825 -45363109 + (CAAAC)n Simple_repeat Simple_repeat 2 47 0 497 306 114 5 chr18 40627443 40627662 -45361272 + MIR SINE MIR 20 262 0 24 0 0 0 chr18 40627759 40627783 -45361151 + AT_rich Low_complexity Low_complexity 1 24 0 397 305 67 18 chr18 40627789 40627953 -45360981 + MIR3 SINE MIR 35 206 -2 451 335 96 18 chr18 40628956 40629237 -45359697 - L2 LINE L2 0 3313 3011 2301 161 84 0 chr18 40631297 40631714 -45357220 - LTR47A LTR ERVL 0 452 1 2242 98 3 0 chr18 40631812 40632109 -45356825 + AluSq SINE Alu 1 298 -15 234 325 110 11 chr18 40633672 40633793 -45355141 - MIR SINE MIR -84 124 16 305 283 130 36 chr18 40633840 40633978 -45354956 - MER117 DNA MER1_type -45 152 2 23 0 0 0 chr18 40634328 40634351 -45354583 + AT_rich Low_complexity Low_complexity 1 23 0 410 239 59 95 chr18 40634414 40634636 -45354298 + L3b LINE CR1 1149 1362 -221 2061 145 3 0 chr18 40635878 40636189 -45352745 + AluSx SINE Alu 1 312 0 288 53 0 0 chr18 40637051 40637089 -45351845 + (CA)n Simple_repeat Simple_repeat 1 38 0 1400 213 117 26 chr18 40638043 40638503 -45350431 - LTR48B LTR ERV1 0 644 143 440 246 17 8 chr18 40638484 40638602 -45350332 - MER34 LTR ERV1 -423 119 1 * 24 32 0 0 chr18 40639587 40639618 -45349316 + AT_rich Low_complexity Low_complexity 1 31 0 302 205 8 33 chr18 40639777 40639899 -45349035 + CT-rich Low_complexity Low_complexity 4 122 0 2077 230 77 30 chr18 40640345 40640906 -45348028 - MLT1E LTR MaLR -3 590 4 350 306 135 31 chr18 40641311 40641533 -45347401 + L3b LINE CR1 1125 1369 -214 23 54 0 0 chr18 40641896 40641933 -45347001 + AT_rich Low_complexity Low_complexity 1 37 0 236 333 96 30 chr18 40642336 40642534 -45346400 - L3 LINE CR1 -184 1393 1183 231 245 0 0 chr18 40643682 40643735 -45345199 - L1MC4 LINE L1 -1337 6705 6653 2624 146 4 148 chr18 40643959 40644466 -45344468 + Tigger2 DNA MER2_type 1 2718 0 222 136 0 0 chr18 40647515 40647559 -45341375 + (CA)n Simple_repeat Simple_repeat 1 44 0 21 36 0 0 chr18 40649079 40649107 -45339827 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr18 40654091 40654122 -45334812 + AT_rich Low_complexity Low_complexity 1 31 0 1049 248 34 19 chr18 40654499 40654808 -45334126 + HERVL40 LTR ERVL 2819 5524 -6 2069 101 4 0 chr18 40654810 40655077 -45333857 + AluSx SINE Alu 2 269 -43 180 0 0 0 chr18 40655099 40655119 -45333815 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1150 216 43 62 chr18 40655138 40655340 -45333594 + LTR40a LTR ERVL 3 207 -312 1235 111 22 0 chr18 40655340 40655521 -45333413 - MER30B DNA MER1_type -4 186 2 1150 216 43 62 chr18 40655521 40655883 -45333051 + LTR40a LTR ERVL 207 516 -3 323 331 175 6 chr18 40655987 40656147 -45332787 - MIR3 SINE MIR -10 198 12 862 278 143 17 chr18 40656651 40657007 -45331927 - MLT1I LTR MaLR -8 401 1 254 235 8 68 chr18 40657220 40657378 -45331556 + GA-rich Low_complexity Low_complexity 2 236 0 231 140 0 0 chr18 40657921 40657971 -45330963 + (GA)n Simple_repeat Simple_repeat 1 50 0 367 182 31 164 chr18 40657992 40658151 -45330783 - MER63 DNA MER1_type -294 768 5 216 284 15 0 chr18 40658153 40658220 -45330714 + A-rich Low_complexity Low_complexity 3 70 0 180 77 0 0 chr18 40658910 40658936 -45329998 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 186 133 0 0 chr18 40659790 40659820 -45329114 + (TG)n Simple_repeat Simple_repeat 1 30 0 230 269 30 15 chr18 40660342 40660409 -45328525 + L2 LINE L2 3204 3271 -1 185 330 75 21 chr18 40660645 40660739 -45328195 - L2 LINE L2 -31 3282 3184 2083 152 126 5 chr18 40661704 40662086 -45326848 - MSTA LTR MaLR 0 428 1 6350 204 54 21 chr18 40662086 40663041 -45325893 - MSTA-int LTR MaLR 0 1651 729 2229 128 0 3 chr18 40663041 40663345 -45325589 - AluSx SINE Alu -9 303 1 6350 204 54 21 chr18 40663345 40663453 -45325481 - MSTA-int LTR MaLR -922 729 626 2107 136 3 0 chr18 40663453 40663748 -45325186 - AluSg SINE Alu -14 296 1 6350 204 54 21 chr18 40663748 40664028 -45324906 - MSTA-int LTR MaLR -1025 626 262 4107 116 128 32 chr18 40664028 40665400 -45323534 + pTR5 LTR ERV1 743 2606 0 1542 153 11 0 chr18 40665400 40665661 -45323273 - MSTA-int LTR MaLR -1314 266 3 1979 166 119 10 chr18 40665663 40666049 -45322885 - MSTA LTR MaLR 0 428 1 2151 195 87 15 chr18 40667163 40667698 -45321236 + LTR48B LTR ERV1 1 644 0 280 200 17 33 chr18 40667734 40667794 -45321140 - MER101 LTR ERV1 -41 433 375 1249 222 26 42 chr18 40667869 40668175 -45320759 - MER101B LTR ERV1 -269 301 1 617 191 8 15 chr18 40668307 40668438 -45320496 + LTR23 LTR ERV1 19 148 -289 974 152 31 97 chr18 40668516 40668806 -45320128 + LTR23 LTR ERV1 162 432 -5 2905 150 129 11 chr18 40668814 40669347 -45319587 + MER50 LTR ERV1 1 596 -138 576 235 41 18 chr18 40669804 40669974 -45318960 - MIR SINE MIR -3 259 86 299 335 30 46 chr18 40670498 40670761 -45318173 + L2 LINE L2 2153 2411 -903 189 0 0 0 chr18 40671071 40671092 -45317842 + (TTG)n Simple_repeat Simple_repeat 2 22 0 255 320 193 35 chr18 40671322 40671581 -45317353 + L2 LINE L2 3005 3304 -9 3235 180 136 24 chr18 40672589 40673332 -45315602 - LTR1B LTR ERV1 0 826 1 257 211 28 0 chr18 40673602 40673673 -45315261 + (TA)n Simple_repeat Simple_repeat 2 74 0 1955 143 76 12 chr18 40673910 40674252 -45314682 + THE1B LTR MaLR 1 364 0 369 0 0 0 chr18 40675304 40675345 -45313589 + (CA)n Simple_repeat Simple_repeat 2 42 0 345 299 14 28 chr18 40675448 40675592 -45313342 + CT-rich Low_complexity Low_complexity 3 144 0 22 0 0 0 chr18 40676136 40676158 -45312776 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr18 40677131 40677153 -45311781 + (A)n Simple_repeat Simple_repeat 1 22 0 583 306 29 0 chr18 40677490 40677660 -45311274 - MER5A DNA MER1_type -14 175 1 195 313 42 0 chr18 40678665 40678713 -45310221 + L2 LINE L2 3201 3250 -22 205 200 0 0 chr18 40680289 40680329 -45308605 + T-rich Low_complexity Low_complexity 2 41 0 22 56 0 0 chr18 40680412 40680448 -45308486 + AT_rich Low_complexity Low_complexity 1 36 0 393 226 12 0 chr18 40681060 40681144 -45307790 + MLT1I LTR MaLR 319 403 -6 315 330 119 28 chr18 40681291 40681467 -45307467 + MIR SINE MIR 70 261 -1 22 0 0 0 chr18 40681776 40681798 -45307136 + AT_rich Low_complexity Low_complexity 1 22 0 2652 96 5 26 chr18 40683014 40683399 -45305535 + MER4B LTR ERV1 230 606 -4 1275 196 9 0 chr18 40683400 40683629 -45305305 + MLT1A1 LTR MaLR 135 365 0 1696 257 66 9 chr18 40683854 40684310 -45304624 - MARNA DNA Mariner -7 579 98 220 309 0 15 chr18 40684338 40684406 -45304528 - MIR SINE MIR -55 153 87 235 329 108 42 chr18 40684829 40685069 -45303865 - L3 LINE CR1 -179 1398 1143 209 375 42 7 chr18 40685126 40685270 -45303664 - L3 LINE CR1 -440 1137 989 2194 85 27 3 chr18 40686074 40686367 -45302567 - AluSp SINE Alu -13 300 1 424 361 32 48 chr18 40687199 40687448 -45301486 - L2 LINE L2 -1 3271 3027 2077 122 0 3 chr18 40687512 40687640 -45301294 + AluSc SINE Alu 1 128 -181 297 0 0 0 chr18 40687640 40687673 -45301261 + (CA)n Simple_repeat Simple_repeat 2 34 0 2077 122 0 3 chr18 40687673 40687838 -45301096 + AluSc SINE Alu 128 293 -16 186 316 71 61 chr18 40688252 40688350 -45300584 - MIR SINE MIR -75 133 35 916 199 24 10 chr18 40688367 40688573 -45300361 + MER3 DNA MER1_type 1 209 0 363 271 8 8 chr18 40688867 40688927 -45300007 - L1MA10 LINE L1 -24 6310 6251 1686 221 46 92 chr18 40688927 40688985 -45299949 - L1ME1 LINE L1 -76 6159 6100 2383 60 0 10 chr18 40688985 40689283 -45299651 + AluY SINE Alu 1 295 -16 195 42 0 0 chr18 40689283 40689307 -45299627 + (TA)n Simple_repeat Simple_repeat 2 25 0 1686 221 46 92 chr18 40689307 40689903 -45299031 - L1ME1 LINE L1 -133 6102 5534 314 261 302 9 chr18 40689898 40690120 -45298814 - L1ME1 LINE L1 -1216 4999 4713 * 4297 274 104 55 chr18 40690152 40692374 -45296560 - L1ME1 LINE L1 -2739 3476 1363 1369 95 4 49 chr18 40692374 40692617 -45296317 - L1PA10 LINE L1 0 6168 5937 4297 274 104 55 chr18 40692617 40693342 -45295592 - L1ME1 LINE L1 -4852 1363 381 2125 191 36 9 chr18 40693342 40693762 -45295172 - MSTB1 LTR MaLR 0 432 2 4297 274 104 55 chr18 40693762 40694125 -45294809 - L1ME1 LINE L1 -5834 381 37 207 100 0 0 chr18 40694308 40694338 -45294596 + (TCCC)n Simple_repeat Simple_repeat 1 30 0 761 107 53 12 chr18 40694363 40694532 -45294402 + CT-rich Low_complexity Low_complexity 3 178 0 242 104 0 21 chr18 40696116 40696164 -45292770 + (TA)n Simple_repeat Simple_repeat 1 47 0 1632 175 49 0 chr18 40696209 40696495 -45292439 - AluSx SINE Alu -12 300 1 456 299 71 30 chr18 40696495 40696692 -45292242 - MIR SINE MIR -44 218 14 1200 201 12 8 chr18 40696709 40696953 -45291981 - MLT1C LTR MaLR -2 465 221 986 184 37 41 chr18 40697010 40697228 -45291706 - MLT1C LTR MaLR -173 217 1 188 271 21 0 chr18 40697296 40697344 -45291590 + L2 LINE L2 3221 3269 -3 2355 230 51 62 chr18 40699479 40700315 -45288619 + MER99 DNA DNA 2 828 0 307 365 7 35 chr18 40700559 40700704 -45288230 + MIR SINE MIR 1 141 -121 229 274 0 16 chr18 40700707 40700769 -45288165 + MIR SINE MIR 118 178 -84 352 278 50 14 chr18 40701205 40701407 -45287527 - L1P5 LINE L1 -628 5528 5318 30 27 0 0 chr18 40702982 40703019 -45285915 + AT_rich Low_complexity Low_complexity 1 37 0 493 306 103 43 chr18 40703518 40703986 -45284948 - L3 LINE CR1 -155 1422 927 276 323 135 0 chr18 40704359 40704492 -45284442 - L3 LINE CR1 -743 834 684 630 289 37 50 chr18 40707850 40708068 -45280866 - MIR SINE MIR -3 259 45 195 339 92 18 chr18 40709816 40709925 -45279009 + L2 LINE L2 3137 3253 -19 220 128 0 0 chr18 40710196 40710235 -45278699 + L2 LINE L2 3275 3313 0 245 189 0 0 chr18 40710860 40710913 -45278021 + A-rich Low_complexity Low_complexity 1 53 0 1638 151 156 59 chr18 40711576 40711792 -45277142 - MSTA LTR MaLR 0 428 234 2268 74 10 17 chr18 40711792 40712090 -45276844 - AluSg SINE Alu -14 296 1 1638 151 156 59 chr18 40712090 40712263 -45276671 - MSTA LTR MaLR -194 234 1 1743 159 50 48 chr18 40712723 40712767 -45276167 - MLT2C1 LTR ERVL 0 397 355 1156 50 6 12 chr18 40712767 40712928 -45276006 + (TAGA)n Simple_repeat Simple_repeat 1 160 0 1743 159 50 48 chr18 40712928 40713279 -45275655 - MLT2C1 LTR ERVL -42 355 1 213 39 0 0 chr18 40713299 40713325 -45275609 + (CA)n Simple_repeat Simple_repeat 1 26 0 222 37 0 0 chr18 40713860 40713887 -45275047 + (TC)n Simple_repeat Simple_repeat 2 28 0 935 56 8 0 chr18 40714000 40714126 -45274808 + (GGAA)n Simple_repeat Simple_repeat 2 128 0 189 328 8 88 chr18 40714162 40714287 -45274647 - MIR3 SINE MIR -1 207 93 257 265 68 43 chr18 40714477 40714594 -45274340 + MLT1I LTR MaLR 5 124 -285 443 273 96 32 chr18 40714639 40714826 -45274108 + MLT1I LTR MaLR 200 398 -11 1753 198 28 38 chr18 40714857 40715251 -45273683 - MLT1B LTR MaLR 0 390 1 2408 34 37 13 chr18 40715454 40715752 -45273182 + AluY SINE Alu 6 310 -1 282 366 49 10 chr18 40716512 40716717 -45272217 + L3 LINE CR1 1064 1276 -301 368 227 43 57 chr18 40717858 40717999 -45270935 + MIR SINE MIR 117 255 -7 2155 114 0 14 chr18 40718388 40718685 -45270249 + AluSq SINE Alu 1 293 -20 439 331 77 77 chr18 40719181 40719519 -45269415 - L2 LINE L2 0 3272 2935 389 292 125 24 chr18 40720006 40720174 -45268760 + MIR SINE MIR 2 186 -76 21 36 0 0 chr18 40720455 40720483 -45268451 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr18 40722040 40722068 -45266866 + AT_rich Low_complexity Low_complexity 1 28 0 229 109 43 0 chr18 40722072 40722118 -45266816 + (TA)n Simple_repeat Simple_repeat 2 49 0 1938 211 80 49 chr18 40722438 40723026 -45265908 - L1ME2 LINE L1 -3 6161 5556 992 124 28 6 chr18 40723026 40723204 -45265730 - L1MA5 LINE L1 -4 6296 6115 1286 102 5 32 chr18 40723212 40723399 -45265535 + AluSg/x SINE Alu 131 312 0 2048 139 42 50 chr18 40723409 40723560 -45265374 - L1MA5 LINE L1 -179 6121 5970 2232 99 0 0 chr18 40723560 40723865 -45265069 + AluSg SINE Alu 1 305 0 2048 139 42 50 chr18 40723865 40724116 -45264818 - L1MA5 LINE L1 -330 5970 5721 615 154 0 27 chr18 40724116 40724184 -45264750 - U6 snRNA snRNA 0 107 42 2238 102 3 0 chr18 40724184 40724479 -45264455 - AluSg SINE Alu -14 296 1 615 154 0 27 chr18 40724479 40724520 -45264414 - U6 snRNA snRNA -65 42 1 318 292 6 89 chr18 40725092 40725250 -45263684 - MIR SINE MIR -63 145 10 240 292 42 14 chr18 40725375 40725447 -45263487 + MIR SINE MIR 17 90 -172 205 299 110 47 chr18 40727857 40727984 -45260950 - L2 LINE L2 -8 3305 3171 346 372 58 7 chr18 40728351 40728628 -45260306 - L2 LINE L2 -555 2759 2469 196 330 37 0 chr18 40728638 40728747 -45260187 - MIR SINE MIR -38 224 112 364 332 71 37 chr18 40729073 40729480 -45259454 + L1MC/D LINE L1 1224 1644 -4752 2010 104 0 0 chr18 40729529 40729789 -45259145 + AluSx SINE Alu 18 277 -35 191 59 0 29 chr18 40729791 40729825 -45259109 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 2166 99 20 0 chr18 40729956 40730248 -45258686 + AluSx SINE Alu 1 298 -14 2124 119 3 0 chr18 40730396 40730689 -45258245 + AluSx SINE Alu 1 294 -18 3685 110 42 8 chr18 40730865 40731442 -45257492 + MER51C LTR ERV1 1 640 0 893 311 77 64 chr18 40731518 40731764 -45257170 + L1MC/D LINE L1 2103 2344 -3871 2544 60 0 0 chr18 40731764 40732064 -45256870 + AluY SINE Alu 1 300 -11 893 311 77 64 chr18 40732064 40732571 -45256363 + L1MC/D LINE L1 2344 2843 -3372 1634 202 0 0 chr18 40732571 40732928 -45256006 - AluJb SINE Alu 0 357 1 893 311 77 64 chr18 40732928 40733613 -45255321 + L1MC/D LINE L1 2843 3521 -2694 235 300 100 31 chr18 40733819 40734109 -45254825 + L1MC/D LINE L1 3770 4079 -2136 282 297 75 31 chr18 40734616 40734909 -45254025 + L1MC/D LINE L1 4828 5133 -1082 606 297 46 33 chr18 40735071 40735527 -45253407 + L1MC/D LINE L1 5335 5797 -438 269 252 107 25 chr18 40735661 40735820 -45253114 + L1MC4 LINE L1 7864 8035 -7 1746 132 57 0 chr18 40737147 40737412 -45251522 + AluJb SINE Alu 1 280 -32 203 61 30 0 chr18 40737412 40737445 -45251489 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 2015 49 60 4 chr18 40737453 40737746 -45251188 + AluY SINE Alu 1 308 0 217 294 33 65 chr18 40739867 40739959 -45248975 - L3 LINE CR1 -1 1576 1488 969 223 33 81 chr18 40740130 40740462 -45248472 - L2 LINE L2 -1 3312 2997 2306 138 71 8 chr18 40740546 40740954 -45247980 + LTR49 LTR ERV1 7 427 -168 974 239 76 39 chr18 40740993 40741323 -45247611 + LTR48B LTR ERV1 303 644 0 488 339 37 12 chr18 40741323 40741568 -45247366 - L2 LINE L2 -450 2864 2614 236 326 37 67 chr18 40741675 40741810 -45247124 + L2 LINE L2 3122 3252 -20 1636 230 34 10 chr18 40742218 40742605 -45246329 - MSTD LTR MaLR 0 396 1 2929 166 27 29 chr18 40742882 40743091 -45245843 + MLT2B3 LTR ERVL 1 209 -345 1764 102 71 8 chr18 40743091 40743346 -45245588 + AluSp SINE Alu 42 312 -1 2929 166 27 29 chr18 40743346 40743650 -45245284 + MLT2B3 LTR ERVL 209 515 -39 249 33 0 0 chr18 40743650 40743680 -45245254 + (CCTA)n Simple_repeat Simple_repeat 2 31 0 2929 166 27 29 chr18 40743680 40743720 -45245214 + MLT2B3 LTR ERVL 515 554 0 271 198 23 12 chr18 40748447 40748533 -45240401 + (TA)n Simple_repeat Simple_repeat 1 87 0 528 197 0 84 chr18 40748543 40748567 -45240367 - FLAM_A SINE Alu -181 130 106 1840 151 165 11 chr18 40748567 40748937 -45239997 + MSTA LTR MaLR 2 428 0 528 197 0 84 chr18 40748937 40749054 -45239880 - FLAM_A SINE Alu -205 106 1 1717 204 67 77 chr18 40749081 40749497 -45239437 - MLT1D LTR MaLR 0 505 86 189 0 0 0 chr18 40749497 40749518 -45239416 + (TC)n Simple_repeat Simple_repeat 2 22 0 1977 150 14 0 chr18 40749518 40749811 -45239123 - AluSx SINE Alu -15 297 1 1717 204 67 77 chr18 40749811 40749898 -45239036 - MLT1D LTR MaLR -417 88 6 188 387 42 31 chr18 40750284 40750475 -45238459 + L2 LINE L2 2565 2757 -557 180 152 0 0 chr18 40751382 40751415 -45237519 + (TG)n Simple_repeat Simple_repeat 2 34 0 730 150 0 0 chr18 40752047 40752160 -45236774 + FRAM SINE Alu 42 154 -22 465 76 0 0 chr18 40752165 40752231 -45236703 + (TA)n Simple_repeat Simple_repeat 1 66 0 1779 161 23 7 chr18 40752458 40752763 -45236171 - AluSx SINE Alu -2 310 1 911 168 21 32 chr18 40752834 40753024 -45235910 - L1MC1 LINE L1 -2 6331 6144 3968 139 45 67 chr18 40753177 40753980 -45234954 - LTR1 LTR ERV1 0 785 1 2760 144 82 4 chr18 40754049 40754563 -45234371 - L1MC1 LINE L1 -184 6149 5596 1796 161 81 6 chr18 40754669 40755017 -45233917 + THE1C LTR MaLR 1 374 -1 387 0 0 0 chr18 40756058 40756101 -45232833 + (TG)n Simple_repeat Simple_repeat 2 44 0 273 267 0 0 chr18 40756706 40756766 -45232168 + (TG)n Simple_repeat Simple_repeat 2 61 0 186 311 244 0 chr18 40757123 40757242 -45231692 - MIR SINE MIR -70 192 45 208 319 105 56 chr18 40757399 40757665 -45231269 - L3b LINE CR1 -188 1395 1117 335 240 45 58 chr18 40758666 40758799 -45230135 - MIR SINE MIR -66 142 60 185 327 135 64 chr18 40759794 40760121 -45228813 + L3 LINE CR1 1066 1415 -162 183 275 0 0 chr18 40760330 40760370 -45228564 + L2 LINE L2 3252 3291 -22 739 256 14 54 chr18 40760938 40761161 -45227773 + MER20 DNA MER1_type 6 219 0 2750 19 3 0 chr18 40761266 40761576 -45227358 + AluY SINE Alu 1 311 0 1008 204 4 51 chr18 40762185 40762440 -45226494 - L1MB8 LINE L1 -6 6172 5930 * 7331 244 45 24 chr18 40762439 40764955 -45223979 - L1MB8 LINE L1 -1094 5052 2485 219 330 91 0 chr18 40764992 40765080 -45223854 + L2 LINE L2 3203 3298 -15 199 333 32 0 chr18 40766218 40766281 -45222653 + MIR SINE MIR 60 124 -84 299 255 58 34 chr18 40766827 40766973 -45221961 - MIR SINE MIR -65 143 34 183 296 25 37 chr18 40767004 40767085 -45221849 + MIR SINE MIR 52 131 -77 197 286 0 0 chr18 40768210 40768252 -45220682 + MER5B DNA MER1_type 1 42 -136 1806 147 0 52 chr18 40768253 40768580 -45220354 + AluJb SINE Alu 3 312 0 468 250 15 23 chr18 40768651 40768783 -45220151 - MER94 DNA DNA -1 133 3 236 328 82 8 chr18 40769080 40769202 -45219732 + L2 LINE L2 2932 3062 -210 187 259 74 0 chr18 40769522 40769576 -45219358 + MIR SINE MIR 86 143 -65 22 0 0 0 chr18 40769666 40769688 -45219246 + AT_rich Low_complexity Low_complexity 1 22 0 397 322 24 62 chr18 40774982 40775193 -45213741 + MIR SINE MIR 1 203 -59 2267 118 0 0 chr18 40775890 40776195 -45212739 + AluSx SINE Alu 1 305 -7 431 283 218 58 chr18 40776493 40777040 -45211894 + L3 LINE CR1 922 1555 -22 445 317 143 26 chr18 40778501 40778959 -45209975 - L2 LINE L2 -253 3060 2539 1892 125 0 0 chr18 40779042 40779298 -45209636 + AluSx SINE Alu 1 256 -56 271 212 76 0 chr18 40779299 40779365 -45209569 + AluSp/q SINE Alu 233 303 0 576 77 0 0 chr18 40779365 40779443 -45209491 + (GAGAA)n Simple_repeat Simple_repeat 3 80 0 1202 55 11 22 chr18 40779456 40779638 -45209296 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 334 302 0 0 chr18 40781477 40781583 -45207351 + (CATATA)n Simple_repeat Simple_repeat 2 107 0 3628 91 6 4 chr18 40781664 40781815 -45207119 + L1PB1 LINE L1 5640 5789 -362 216 67 0 0 chr18 40781815 40781845 -45207089 + (CA)n Simple_repeat Simple_repeat 2 31 0 3628 91 6 4 chr18 40781845 40782201 -45206733 + L1PB1 LINE L1 5789 6148 -3 476 287 30 30 chr18 40782217 40782447 -45206487 - L1ME1 LINE L1 -32 6134 5905 191 356 80 53 chr18 40782762 40782987 -45205947 + L2 LINE L2 3038 3268 -4 305 294 37 18 chr18 40783739 40783902 -45205032 + (TG)n Simple_repeat Simple_repeat 1 166 0 237 33 0 0 chr18 40784544 40784574 -45204360 + (TG)n Simple_repeat Simple_repeat 2 31 0 192 362 76 0 chr18 40784699 40784804 -45204130 - L2 LINE L2 0 3272 3160 2125 158 13 0 chr18 40784857 40785231 -45203703 + L1MB1 LINE L1 5789 6167 -1 279 324 110 6 chr18 40785236 40785409 -45203525 + L2 LINE L2 710 900 -2414 235 322 168 13 chr18 40785450 40785599 -45203335 + L2 LINE L2 2556 2727 -587 1658 231 32 34 chr18 40785735 40786202 -45202732 - MLT1C LTR MaLR -1 466 1 280 359 70 14 chr18 40786582 40786724 -45202210 - MIR3 SINE MIR -25 183 34 332 336 55 16 chr18 40786830 40787029 -45201905 + MIR SINE MIR 18 224 -38 180 111 0 0 chr18 40787069 40787096 -45201838 + (CATA)n Simple_repeat Simple_repeat 2 28 0 275 390 65 6 chr18 40787258 40787427 -45201507 - MIR SINE MIR -31 231 53 310 129 86 0 chr18 40789117 40789280 -45199654 + (TA)n Simple_repeat Simple_repeat 2 178 0 1148 236 160 56 chr18 40789314 40789762 -45199172 + L1MC4 LINE L1 7289 7808 -234 1122 229 9 5 chr18 40789762 40789985 -45198949 - MER58A DNA MER1_type 0 224 1 1148 236 160 56 chr18 40789985 40790092 -45198842 + L1MC4 LINE L1 7808 7902 -140 34 0 0 0 chr18 40791072 40791106 -45197828 + AT_rich Low_complexity Low_complexity 1 34 0 1396 220 40 88 chr18 40793203 40793681 -45195253 + MSTB2 LTR MaLR 1 455 -2 3941 271 135 63 chr18 40793685 40795302 -45193632 + MLT-int LTR MaLR 2 1735 0 1483 203 25 87 chr18 40795302 40795750 -45193184 + MSTB1 LTR MaLR 1 420 -12 14813 198 20 43 chr18 40798458 40799254 -45189680 + L1P3 LINE L1 202 1015 -5446 2343 97 0 7 chr18 40799254 40799564 -45189370 - AluSx SINE Alu -4 308 1 14813 198 20 43 chr18 40799564 40801219 -45187715 + L1P3 LINE L1 1015 2534 -3927 1942 92 107 0 chr18 40801219 40801491 -45187443 + AluY SINE Alu 1 301 -10 14813 198 20 43 chr18 40801491 40803215 -45185719 + L1P3 LINE L1 2534 4297 -2164 5474 112 23 2 chr18 40803211 40804044 -45184890 + L1PA11 LINE L1 5325 6174 0 * 22 35 0 0 chr18 40804149 40804178 -45184756 + AT_rich Low_complexity Low_complexity 1 29 0 1901 179 77 29 chr18 40804621 40804763 -45184171 - Tigger2a DNA MER2_type -2274 434 300 207 0 0 0 chr18 40804763 40804786 -45184148 + (TG)n Simple_repeat Simple_repeat 2 24 0 1901 179 77 29 chr18 40804786 40805057 -45183877 - Tigger2a DNA MER2_type -2408 300 1 28 71 0 0 chr18 40805310 40805366 -45183568 + AT_rich Low_complexity Low_complexity 1 56 0 2088 105 0 57 chr18 40806394 40806709 -45182225 - AluSx SINE Alu -15 297 1 1055 249 65 12 chr18 40806777 40807216 -45181718 + MER74A LTR ERVL 1 590 -32 925 222 11 6 chr18 40807651 40807831 -45181103 - MLT1D LTR MaLR -77 428 248 2319 262 72 62 chr18 40807941 40809228 -45179706 + L1ME1 LINE L1 778 2036 -4370 1907 162 0 0 chr18 40809228 40809512 -45179422 - AluJo SINE Alu -28 284 1 2319 262 72 62 chr18 40809512 40810045 -45178889 + L1ME1 LINE L1 2036 2562 -3844 3897 229 34 16 chr18 40810063 40810900 -45178034 - MER21B LTR ERV1 -11 852 1 6240 251 88 40 chr18 40810940 40812052 -45176882 + L1ME1 LINE L1 2595 3653 -2753 672 230 0 22 chr18 40812052 40812187 -45176747 + FLAM_C SINE Alu 2 133 0 6240 251 88 40 chr18 40812187 40813889 -45175045 + L1ME1 LINE L1 3653 5542 -864 2335 227 32 20 chr18 40813964 40814559 -45174375 + L1ME1 LINE L1 5547 6148 -278 703 255 54 32 chr18 40814564 40814934 -45174000 + L1ME1 LINE L1 5972 6397 -29 24 0 0 0 chr18 40815489 40815513 -45173421 + AT_rich Low_complexity Low_complexity 1 24 0 448 244 114 0 chr18 40815618 40815749 -45173185 + MIR SINE MIR 48 193 -69 275 285 65 32 chr18 40816954 40817077 -45171857 + MIR3 SINE MIR 50 176 -32 450 322 111 0 chr18 40817914 40818085 -45170849 - MER91A DNA MER1_type -3 193 4 2144 171 55 31 chr18 40819136 40819552 -45169382 + MSTB LTR MaLR 1 426 0 195 162 0 0 chr18 40823357 40823394 -45165540 + T-rich Low_complexity Low_complexity 1 37 0 2508 14 0 11 chr18 40823686 40824022 -45164912 + AluYa5 SINE Alu 1 333 0 2199 112 3 13 chr18 40824619 40824924 -45164010 - AluSc SINE Alu -5 304 3 201 280 0 0 chr18 40826300 40826350 -45162584 + L2 LINE L2 3248 3297 -16 788 236 39 26 chr18 40827692 40827921 -45161013 + MIR SINE MIR 14 245 -17 1194 281 3 7 chr18 40828257 40828549 -45160385 + AluJb SINE Alu 3 293 -9 30 27 0 0 chr18 40830848 40830885 -45158049 + AT_rich Low_complexity Low_complexity 1 37 0 987 208 6 0 chr18 40831413 40831586 -45157348 - FAM SINE Alu -1 174 1 325 259 52 30 chr18 40831854 40831989 -45156945 - MIR SINE MIR -3 259 122 1080 330 141 10 chr18 40832017 40832664 -45156270 + L2 LINE L2 2343 3070 -243 785 257 6 6 chr18 40832785 40832956 -45155978 - MER45A DNA AcHobo 0 178 8 266 333 111 0 chr18 40833050 40833167 -45155767 - MIR SINE MIR -131 131 2 239 349 41 27 chr18 40833935 40834081 -45154853 - MIR SINE MIR -87 175 28 32 26 0 0 chr18 40834776 40834815 -45154119 + AT_rich Low_complexity Low_complexity 1 39 0 688 294 33 35 chr18 40835403 40835770 -45153164 + L1MC4a LINE L1 5545 5910 -1898 216 200 0 0 chr18 40835847 40835892 -45153042 + (TATG)n Simple_repeat Simple_repeat 4 48 0 303 71 0 0 chr18 40835943 40835985 -45152949 + (CA)n Simple_repeat Simple_repeat 1 42 0 198 143 0 0 chr18 40836088 40836123 -45152811 + (CATATA)n Simple_repeat Simple_repeat 4 38 0 405 109 16 0 chr18 40837403 40837467 -45151467 - MER92C LTR ERV1 0 554 490 264 306 43 81 chr18 40838112 40838298 -45150636 + L3b LINE CR1 1258 1436 -147 1715 162 57 19 chr18 40840719 40841034 -45147900 - MER61A LTR ERV1 0 343 17 20251 68 32 3 chr18 40841035 40844746 -45144188 - MER61A-int LTR ERV1 -1 5216 1320 311 169 24 19 chr18 40844739 40844851 -45144083 - MER61A-int LTR ERV1 -4440 777 632 * 28 29 0 0 chr18 40844899 40844934 -45144000 + GC_rich Low_complexity Low_complexity 1 35 0 1580 167 11 51 chr18 40844936 40845047 -45143887 - MER61A-int LTR ERV1 -4717 500 386 2411 56 0 13 chr18 40845047 40845349 -45143585 + AluY SINE Alu 3 300 -11 1580 167 11 51 chr18 40845349 40845591 -45143343 - MER61A-int LTR ERV1 -4831 386 161 1646 159 60 33 chr18 40845662 40845996 -45142938 - MER61A LTR ERV1 0 343 1 23 33 0 0 chr18 40849998 40850028 -45138906 + AT_rich Low_complexity Low_complexity 1 30 0 253 274 81 40 chr18 40850554 40850678 -45138256 + MIR SINE MIR 68 196 -66 2183 118 32 30 chr18 40852089 40852462 -45136472 - THE1C LTR MaLR -1 374 1 221 197 16 0 chr18 40852490 40852551 -45136383 + (TAAA)n Simple_repeat Simple_repeat 4 65 0 22 0 0 0 chr18 40853127 40853149 -45135785 + AT_rich Low_complexity Low_complexity 1 22 0 396 0 0 0 chr18 40853343 40853387 -45135547 + (TTA)n Simple_repeat Simple_repeat 2 45 0 23 33 0 0 chr18 40853773 40853803 -45135131 + AT_rich Low_complexity Low_complexity 1 30 0 19938 187 22 20 chr18 40854178 40855512 -45133422 - L1PA13 LINE L1 0 7601 6271 2235 101 0 25 chr18 40855512 40855829 -45133105 - AluY SINE Alu -2 309 1 19938 187 22 20 chr18 40855829 40857503 -45131431 - L1PA13 LINE L1 -1330 6271 4601 2067 132 3 0 chr18 40857503 40857792 -45131142 - AluSg SINE Alu -20 290 1 19938 187 22 20 chr18 40857792 40861275 -45127659 - L1PA13 LINE L1 -3000 4601 7 2216 122 3 0 chr18 40861690 40862002 -45126932 - AluSp SINE Alu 0 313 1 229 337 30 35 chr18 40862568 40862737 -45126197 - L2 LINE L2 -39 3274 3107 583 188 104 61 chr18 40862747 40862912 -45126022 - MER5A DNA MER1_type 0 189 4 737 329 163 33 chr18 40862986 40863465 -45125469 - L2 LINE L2 -308 3005 2589 3230 33 8 0 chr18 40863465 40863858 -45125076 + L1PA4 LINE L1 5760 6155 0 737 329 163 33 chr18 40863858 40864286 -45124648 - L2 LINE L2 -724 2589 1981 265 286 0 0 chr18 40864613 40864676 -45124258 + G-rich Low_complexity Low_complexity 2 64 0 482 90 0 26 chr18 40864676 40864754 -45124180 + (GGAA)n Simple_repeat Simple_repeat 1 76 0 216 129 16 32 chr18 40866630 40866692 -45122242 + GA-rich Low_complexity Low_complexity 2 62 0 182 114 0 29 chr18 40867361 40867396 -45121538 + (CAAAC)n Simple_repeat Simple_repeat 2 35 0 25 31 0 0 chr18 40868806 40868838 -45120096 + AT_rich Low_complexity Low_complexity 1 32 0 298 263 25 0 chr18 40869215 40869295 -45119639 + GA-rich Low_complexity Low_complexity 2 83 0 201 200 0 40 chr18 40869930 40869980 -45118954 + T-rich Low_complexity Low_complexity 2 49 0 413 203 0 0 chr18 40870250 40870319 -45118615 + FLAM_A SINE Alu 23 91 -51 190 333 46 46 chr18 40870714 40870801 -45118133 - L2 LINE L2 -49 3223 3137 3364 131 29 29 chr18 40871177 40871704 -45117230 - MER1A DNA MER1_type 0 527 1 28 0 0 0 chr18 40871746 40871774 -45117160 + AT_rich Low_complexity Low_complexity 1 28 0 365 244 0 0 chr18 40872215 40872318 -45116616 + AluS SINE Alu 1 79 -224 1360 118 76 0 chr18 40873028 40873239 -45115695 - MER30 DNA MER1_type 0 230 4 226 313 70 9 chr18 40874267 40874382 -45114552 + MLT1I LTR MaLR 1 122 -287 347 237 37 82 chr18 40874477 40874612 -45114322 + MLT1I LTR MaLR 281 409 0 357 131 0 0 chr18 40875011 40875072 -45113862 + (TG)n Simple_repeat Simple_repeat 2 62 0 2371 118 16 22 chr18 40875140 40875506 -45113428 + THE1B LTR MaLR 1 364 0 605 323 40 14 chr18 40875710 40875933 -45113001 - MIR SINE MIR -26 236 8 316 267 44 43 chr18 40877012 40877245 -45111689 - MER69 DNA AcHobo -2 2524 2279 621 284 75 19 chr18 40877333 40877653 -45111281 - L1MD2 LINE L1 -251 6108 5771 394 202 77 62 chr18 40877697 40877798 -45111136 - MER69 DNA AcHobo -300 2226 2128 2246 103 20 0 chr18 40877798 40878098 -45110836 + AluSq SINE Alu 1 306 -7 394 202 77 62 chr18 40878098 40878204 -45110730 - MER69 DNA AcHobo -398 2128 2016 1157 285 30 14 chr18 40878208 40878646 -45110288 - MER69 DNA AcHobo -1958 568 124 281 276 115 25 chr18 40879752 40879877 -45109057 + L1ME LINE L1 5602 5714 -407 2067 158 37 8 chr18 40879877 40880256 -45108678 - MLT1B LTR MaLR 0 390 1 281 276 115 25 chr18 40880256 40880373 -45108561 + L1ME LINE L1 5714 5866 -255 733 217 6 37 chr18 40880401 40880562 -45108372 + FAM SINE Alu 1 156 -19 252 122 0 0 chr18 40880569 40880610 -45108324 + (CA)n Simple_repeat Simple_repeat 2 42 0 2046 127 26 7 chr18 40881167 40881474 -45107460 + AluSq SINE Alu 1 313 0 7969 16 1 0 chr18 40881692 40883391 -45105543 - L1HS LINE L1 -52 6103 4404 297 330 35 103 chr18 40884466 40884748 -45104186 - L2 LINE L2 -1 3271 3009 483 18 0 0 chr18 40885145 40885201 -45103733 + (CA)n Simple_repeat Simple_repeat 1 56 0 306 366 6 34 chr18 40886630 40886805 -45102129 + MIR SINE MIR 79 248 -14 243 307 40 60 chr18 40889010 40889110 -45099824 + L3 LINE CR1 1429 1527 -50 566 199 232 0 chr18 40889110 40889261 -45099673 - MER5A DNA MER1_type -3 186 1 243 307 40 60 chr18 40889261 40889310 -45099624 + L3 LINE CR1 1527 1575 -2 242 300 2 113 chr18 40890194 40890409 -45098525 - MIR SINE MIR -42 220 30 294 143 0 0 chr18 40890708 40890757 -45098177 + (TTCC)n Simple_repeat Simple_repeat 4 52 0 1763 240 0 3 chr18 40891279 40891645 -45097289 + MLT1A1 LTR MaLR 1 365 0 256 343 66 22 chr18 40894886 40895023 -45093911 + MIR3 SINE MIR 5 147 -61 957 474 6 0 chr18 40897065 40897409 -45091525 - MER7A DNA MER2_type 0 346 3 192 40 0 0 chr18 40897425 40897450 -45091484 + (CA)n Simple_repeat Simple_repeat 1 25 0 284 360 36 74 chr18 40897457 40897793 -45091141 + L2 LINE L2 2915 3237 -35 255 280 43 32 chr18 40898214 40898307 -45090627 - MIR3 SINE MIR -103 105 12 206 224 0 0 chr18 40898384 40898433 -45090501 + GA-rich Low_complexity Low_complexity 4 52 0 340 260 34 82 chr18 40898553 40898600 -45090334 - MIR SINE MIR -2 260 212 279 0 0 0 chr18 40898600 40898631 -45090303 + (CAT)n Simple_repeat Simple_repeat 2 32 0 340 260 34 82 chr18 40898631 40898791 -45090143 - MIR SINE MIR -50 212 63 577 119 0 0 chr18 40898985 40899069 -45089865 + AluJ/FLAM SINE Alu 1 84 -228 3801 134 53 0 chr18 40900769 40901389 -45087545 - MER39B LTR ERV1 0 653 1 295 297 74 20 chr18 40901792 40901940 -45086994 + L3 LINE CR1 502 657 -920 655 374 68 20 chr18 40902504 40903007 -45085927 + L3 LINE CR1 1032 1558 -19 282 176 20 0 chr18 40903172 40903223 -45085711 - MIR SINE MIR 0 262 211 21 36 0 0 chr18 40903282 40903310 -45085624 + AT_rich Low_complexity Low_complexity 1 28 0 230 363 65 8 chr18 40904255 40904379 -45084555 - MIR SINE MIR -80 182 52 260 247 135 67 chr18 40904860 40904949 -45083985 - L2 LINE L2 -2 3270 3176 1438 314 103 34 chr18 40904999 40905854 -45083080 - L2 LINE L2 -297 3016 2105 348 148 0 0 chr18 40908676 40908737 -45080197 + (TCCA)n Simple_repeat Simple_repeat 3 63 0 204 340 53 21 chr18 40908753 40908847 -45080087 - L2 LINE L2 -18 3295 3199 413 247 0 0 chr18 40911310 40911395 -45077539 + MIR3 SINE MIR 121 205 -3 25 0 0 0 chr18 40912682 40912707 -45076227 + AT_rich Low_complexity Low_complexity 1 25 0 184 279 70 70 chr18 40912759 40912888 -45076046 + MIR3 SINE MIR 40 168 -40 2612 45 0 3 chr18 40913561 40913869 -45075065 + AluY SINE Alu 3 309 -2 21 0 0 0 chr18 40914531 40914552 -45074382 + AT_rich Low_complexity Low_complexity 1 21 0 33 25 0 0 chr18 40914955 40914995 -45073939 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr18 40915432 40915453 -45073481 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr18 40915541 40915573 -45073361 + AT_rich Low_complexity Low_complexity 1 32 0 182 61 0 30 chr18 40915610 40915643 -45073291 + (TTTTTA)n Simple_repeat Simple_repeat 3 34 0 182 258 0 81 chr18 40916963 40917025 -45071909 + MIR3 SINE MIR 123 179 -29 197 196 18 18 chr18 40917078 40917134 -45071800 - MIR SINE MIR -108 154 99 315 0 0 0 chr18 40918119 40918154 -45070780 + (TG)n Simple_repeat Simple_repeat 2 36 0 362 264 0 0 chr18 40918571 40918662 -45070272 + MIR SINE MIR 171 261 -1 460 291 57 19 chr18 40918747 40918905 -45070029 - MLT1F LTR MaLR -378 164 1 283 326 17 51 chr18 40919022 40919197 -45069737 - MIR SINE MIR -6 256 88 2081 82 0 0 chr18 40920643 40920899 -45068035 + AluSg SINE Alu 30 285 -25 217 323 75 11 chr18 40921177 40921270 -45067664 - L2 LINE L2 -31 3282 3184 251 250 100 17 chr18 40924428 40924488 -45064446 + MIR SINE MIR 88 152 -56 245 109 22 0 chr18 40925009 40925055 -45063879 + (TTCA)n Simple_repeat Simple_repeat 4 50 0 2412 226 21 46 chr18 40926279 40926853 -45062081 + L1MC/D LINE L1 4727 5314 -1030 1151 94 108 0 chr18 40926853 40927056 -45061878 - L1MA8 LINE L1 -7 6284 6060 2412 226 21 46 chr18 40927056 40927354 -45061580 + L1MC/D LINE L1 5314 5570 -774 1411 189 7 14 chr18 40927354 40927695 -45061239 - AluJb SINE Alu 0 343 5 2412 226 21 46 chr18 40927695 40927814 -45061120 + L1MC/D LINE L1 5570 5690 -654 180 312 147 32 chr18 40928663 40928881 -45060053 + L3 LINE CR1 1165 1407 -170 1190 195 23 5 chr18 40928896 40929117 -45059817 - AluJo SINE Alu -87 225 1 299 282 0 0 chr18 40929551 40929629 -45059305 - MER5A DNA MER1_type -85 104 27 196 328 134 25 chr18 40930103 40930222 -45058712 + L2 LINE L2 3176 3307 -6 23 0 0 0 chr18 40931012 40931035 -45057899 + AT_rich Low_complexity Low_complexity 1 23 0 378 127 0 0 chr18 40931412 40931515 -45057419 + Alu SINE Alu 227 329 0 653 229 8 0 chr18 40931527 40931658 -45057276 + FLAM_A SINE Alu 1 132 -1 1794 237 58 56 chr18 40932480 40933084 -45055850 + MER77 LTR ERV1 1 605 0 537 300 79 50 chr18 40934045 40934348 -45054586 - LTR16A1 LTR ERVL 0 457 146 539 284 103 35 chr18 40935163 40935395 -45053539 + MLT1H LTR MaLR 39 286 -263 615 217 14 25 chr18 40935454 40935614 -45053320 + MLT1H LTR MaLR 392 590 0 512 56 14 0 chr18 40935981 40936053 -45052881 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 547 262 53 118 chr18 40936876 40937231 -45051703 - L1ME LINE L1 -5456 614 283 414 329 119 40 chr18 40938528 40938972 -45049962 - L2 LINE L2 0 3313 2835 836 324 41 10 chr18 40939161 40939304 -45049630 - L2 LINE L2 -780 2534 2397 2089 125 34 0 chr18 40939304 40939599 -45049335 + AluSq SINE Alu 1 305 -8 836 324 41 10 chr18 40939599 40939847 -45049087 - L2 LINE L2 -917 2397 2131 258 258 46 168 chr18 40939848 40940349 -45048585 - L2 LINE L2 -1362 1952 1513 695 304 144 28 chr18 40940426 40940814 -45048120 + LTR16A LTR ERVL 18 450 0 325 292 56 45 chr18 40940814 40940992 -45047942 + HERV16 LTR ERVL 1 180 -4816 600 282 45 5 chr18 40941499 40941701 -45047233 + HERV16 LTR ERVL 808 1017 -3979 2001 123 0 48 chr18 40941703 40942012 -45046922 + AluSx SINE Alu 1 294 -18 2051 101 0 4 chr18 40942014 40942290 -45046644 + AluY SINE Alu 1 275 -36 204 40 0 0 chr18 40942298 40942323 -45046611 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 823 347 28 53 chr18 40942323 40942891 -45046043 + HERV16 LTR ERVL 1009 1562 -3434 501 274 6 25 chr18 40942970 40943127 -45045807 + HERV16 LTR ERVL 1715 1868 -3128 1837 241 23 33 chr18 40943173 40943692 -45045242 + LTR40a LTR ERVL 3 516 -3 635 346 47 49 chr18 40943966 40944501 -45044433 + ERVL LTR ERVL 3341 3874 -1780 310 368 44 0 chr18 40945076 40945212 -45043722 + MIR SINE MIR 2 143 -119 605 306 190 42 chr18 40945792 40946491 -45042443 - HAL1 LINE L1 0 2507 1705 1355 155 28 53 chr18 40946491 40946775 -45042159 - MSTA LTR MaLR 0 428 152 1021 103 7 0 chr18 40946775 40946920 -45042014 + AluSg/x SINE Alu 165 310 -2 1618 241 37 74 chr18 40947713 40948253 -45040681 + MLT2B1 LTR ERVL 1 520 0 308 373 6 33 chr18 40948675 40948869 -45040065 + MIR SINE MIR 21 206 -56 209 321 73 66 chr18 40949260 40949397 -45039537 - MIR3 SINE MIR -6 202 65 268 363 128 39 chr18 40952137 40952341 -45036593 + L2 LINE L2 2677 2898 -416 207 372 13 19 chr18 40952351 40952507 -45036427 + L2 LINE L2 2475 2629 -685 373 314 192 8 chr18 40952536 40952906 -45036028 - L2 LINE L2 -971 2343 1906 192 171 29 0 chr18 40952921 40952956 -45035978 - MIR SINE MIR -9 253 218 22 0 0 0 chr18 40952960 40952982 -45035952 + AT_rich Low_complexity Low_complexity 1 22 0 1827 211 8 3 chr18 40953078 40953439 -45035495 + MLT1A1 LTR MaLR 1 363 -2 5715 236 59 58 chr18 40953441 40955172 -45033762 + MLT1A1-int LTR MaLR 2 1734 -1 1660 203 49 11 chr18 40955176 40955525 -45033409 + MLT1A1 LTR MaLR 4 365 0 223 222 0 48 chr18 40955968 40956031 -45032903 + L2 LINE L2 3250 3309 -4 201 74 0 0 chr18 40956125 40956152 -45032782 + (A)n Simple_repeat Simple_repeat 1 27 0 608 322 26 13 chr18 40957086 40957313 -45031621 + L2 LINE L2 2475 2704 -610 562 298 92 9 chr18 40958338 40958556 -45030378 + MIR SINE MIR 27 262 0 22 56 0 0 chr18 40960034 40960070 -45028864 + AT_rich Low_complexity Low_complexity 1 36 0 185 0 0 39 chr18 40962175 40962201 -45026733 + (TTA)n Simple_repeat Simple_repeat 3 27 0 1769 79 0 8 chr18 40962201 40962442 -45026492 - L1PA5 LINE L1 -18 6136 5898 21 0 0 0 chr18 40964105 40964126 -45024808 + AT_rich Low_complexity Low_complexity 1 21 0 339 286 105 36 chr18 40964135 40964411 -45024523 + L1ME2 LINE L1 942 1236 -4883 21 36 0 0 chr18 40965097 40965125 -45023809 + AT_rich Low_complexity Low_complexity 1 28 0 397 283 209 7 chr18 40965383 40965772 -45023162 + L1ME2 LINE L1 2327 2636 -3493 247 65 43 0 chr18 40965772 40965818 -45023116 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 397 283 209 7 chr18 40965818 40965989 -45022945 + L1ME2 LINE L1 2636 3000 -3129 484 285 53 102 chr18 40966041 40966493 -45022441 + L1ME2 LINE L1 3005 3434 -2695 42378 37 22 7 chr18 40966591 40972656 -45016278 + L1PA2 LINE L1 1 6153 -2 805 294 85 39 chr18 40972756 40974052 -45014882 + L1ME2 LINE L1 3458 4813 -1316 311 294 98 14 chr18 40974147 40974290 -45014644 + L1ME2 LINE L1 5226 5380 -749 6262 161 37 28 chr18 40974290 40974666 -45014268 + L1MA6 LINE L1 4071 4442 -1858 2305 97 0 25 chr18 40974666 40974985 -45013949 + AluSx SINE Alu 1 311 -1 6262 161 37 28 chr18 40974985 40976796 -45012138 + L1MA6 LINE L1 4442 6294 -6 1615 224 95 11 chr18 40976836 40977184 -45011750 + ERVL-B1 LTR ERVL 3068 3444 -2320 4715 164 54 16 chr18 40977187 40977873 -45011061 + ERVL-B1 LTR ERVL 4854 5581 -183 1808 162 159 8 chr18 40977873 40978243 -45010691 - MSTA LTR MaLR 0 428 3 4715 164 54 16 chr18 40978243 40978427 -45010507 + ERVL-B1 LTR ERVL 5581 5757 -7 2134 219 49 24 chr18 40978427 40978934 -45010000 + MLT2B1 LTR ERVL 1 520 0 634 314 108 10 chr18 40980397 40980703 -45008231 - MLT1I LTR MaLR -8 401 66 1191 264 148 4 chr18 40983982 40984448 -45004486 + L1ME2 LINE L1 5605 6137 -10 514 141 67 107 chr18 40984791 40984940 -45003994 - LTR45B LTR ERV1 -4 485 343 2207 101 10 0 chr18 40985496 40985784 -45003150 - AluSc SINE Alu -18 291 1 615 273 100 5 chr18 40986312 40986532 -45002402 - LTR16C LTR ERVL -3 488 248 1040 283 73 16 chr18 40987161 40987532 -45001402 - LTR16C LTR ERVL -3 488 97 240 356 29 29 chr18 40987818 40987922 -45001012 - MIR SINE MIR -72 136 33 754 247 22 0 chr18 40987954 40988136 -45000798 + MER5A DNA MER1_type 2 187 -2 291 312 13 0 chr18 40988506 40988583 -45000351 + MIR3 SINE MIR 83 160 -48 21 0 0 0 chr18 40988814 40988835 -45000099 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr18 40989703 40989727 -44999207 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr18 40989836 40989858 -44999076 + AT_rich Low_complexity Low_complexity 1 22 0 186 236 109 0 chr18 40989876 40989931 -44999003 - MIR SINE MIR -90 172 112 194 258 31 109 chr18 40991430 40991558 -44997376 + MIR SINE MIR 95 212 -50 869 223 175 15 chr18 40991558 40991895 -44997039 + LTR37A LTR ERV1 36 426 0 2347 104 0 0 chr18 40992500 40992808 -44996126 - AluSc SINE Alu -1 308 1 408 189 86 169 chr18 40992886 40993199 -44995735 + MER31-int LTR ERV1 1150 1436 -3500 12179 129 14 12 chr18 40993481 40995422 -44993512 - Tigger1 DNA MER2_type 0 2418 474 1061 224 0 59 chr18 40995433 40995705 -44993229 - AluJo SINE Alu -22 290 35 2725 174 19 12 chr18 40995705 40996188 -44992746 - Tigger1 DNA MER2_type -1931 487 2 21 0 0 0 chr18 40996461 40996482 -44992452 + AT_rich Low_complexity Low_complexity 1 21 0 2348 249 16 27 chr18 40996955 40997594 -44991340 + MER31-int LTR ERV1 3618 4249 -687 310 264 0 11 chr18 40997598 40997685 -44991249 + LTR37A LTR ERV1 5 90 -336 1044 164 39 10 chr18 40997694 40997902 -44991032 - Tigger1 DNA MER2_type -3 2415 2202 862 171 0 44 chr18 40997898 40998056 -44990878 - Tigger1 DNA MER2_type -2267 151 1 * 336 48 0 0 chr18 40998196 40998238 -44990696 + (TG)n Simple_repeat Simple_repeat 2 43 0 349 194 85 31 chr18 40998250 40998379 -44990555 + LTR37A LTR ERV1 291 426 0 180 0 0 0 chr18 40998460 40998480 -44990454 + (TC)n Simple_repeat Simple_repeat 2 21 0 225 196 0 0 chr18 40998480 40998526 -44990408 + (TA)n Simple_repeat Simple_repeat 2 47 0 204 40 0 0 chr18 40998595 40998620 -44990314 + (TAGA)n Simple_repeat Simple_repeat 3 27 0 2317 119 8 8 chr18 40998750 40999103 -44989831 + THE1A LTR MaLR 1 353 -2 11262 107 5 1 chr18 40999105 41000678 -44988256 + THE1A-int LTR MaLR 1 1580 0 2209 124 6 25 chr18 41000678 41001040 -44987894 + THE1A LTR MaLR 1 355 0 261 153 69 56 chr18 41001044 41001116 -44987818 + L1MC4 LINE L1 6626 6698 -1344 183 316 138 7 chr18 41001320 41001472 -44987462 + MIR SINE MIR 34 205 -57 474 318 117 5 chr18 41002458 41002672 -44986262 - MIR SINE MIR -16 246 9 22 0 0 0 chr18 41004810 41004832 -44984102 + AT_rich Low_complexity Low_complexity 1 22 0 380 329 107 8 chr18 41005064 41005298 -44983636 - LTR33 LTR ERVL -2 519 263 185 0 0 39 chr18 41005476 41005502 -44983432 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2055 98 4 4 chr18 41005506 41005781 -44983153 - AluSx SINE Alu -37 275 1 655 305 74 30 chr18 41005990 41006354 -44982580 + MLT1I LTR MaLR 3 382 -27 266 318 62 99 chr18 41006717 41006959 -44981975 - L3b LINE CR1 -2 1581 1349 1470 212 69 25 chr18 41006968 41007360 -44981574 - MLT1C LTR MaLR 0 467 59 227 338 77 39 chr18 41010322 41010501 -44978433 + MIR SINE MIR 40 234 -28 246 247 43 11 chr18 41010754 41010847 -44978087 + (TATATG)n Simple_repeat Simple_repeat 4 99 0 183 42 0 0 chr18 41010847 41010871 -44978063 + (CA)n Simple_repeat Simple_repeat 1 24 0 932 280 42 35 chr18 41010956 41011465 -44977469 - L1MB5 LINE L1 -306 5868 5356 24 67 0 0 chr18 41011896 41011941 -44976993 + AT_rich Low_complexity Low_complexity 1 45 0 26 74 0 0 chr18 41013110 41013164 -44975770 + AT_rich Low_complexity Low_complexity 1 54 0 183 231 38 0 chr18 41013172 41013332 -44975602 + (TA)n Simple_repeat Simple_repeat 1 166 0 245 212 41 0 chr18 41013371 41013702 -44975232 + (TA)n Simple_repeat Simple_repeat 1 344 0 341 222 23 0 chr18 41013721 41013892 -44975042 + (TA)n Simple_repeat Simple_repeat 2 176 0 408 291 15 15 chr18 41013997 41014131 -44974803 + MER94 DNA DNA 1 134 0 282 313 0 70 chr18 41015606 41015734 -44973200 - MIR SINE MIR -38 224 106 617 235 35 20 chr18 41016960 41017160 -44971774 + MER96B DNA MER1_type? 205 407 -10 484 273 8 8 chr18 41018441 41018562 -44970372 - LTR28 LTR ERV1 0 1020 900 1646 208 101 108 chr18 41018604 41019392 -44969542 - LTR1B LTR ERV1 -39 981 3 259 307 69 30 chr18 41019599 41019700 -44969234 - MIR SINE MIR -64 144 40 2708 209 83 42 chr18 41020650 41021544 -44967390 - MER63C DNA MER1_type 0 930 1 249 349 18 18 chr18 41021947 41022056 -44966878 + MER5B DNA MER1_type 4 112 -66 23 0 0 0 chr18 41022332 41022355 -44966579 + AT_rich Low_complexity Low_complexity 1 23 0 206 331 128 12 chr18 41022370 41022542 -44966392 - L3 LINE CR1 -1090 487 296 23 0 0 0 chr18 41022580 41022603 -44966331 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr18 41022639 41022667 -44966267 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr18 41022873 41022910 -44966024 + AT_rich Low_complexity Low_complexity 1 37 0 2323 99 0 3 chr18 41024270 41024582 -44964352 - AluSq SINE Alu -2 311 1 211 225 12 50 chr18 41024660 41024740 -44964194 + GA-rich Low_complexity Low_complexity 3 79 0 1321 318 25 34 chr18 41024801 41025329 -44963605 + L1ME2 LINE L1 2 524 -5546 1186 261 119 35 chr18 41025331 41025784 -44963150 + L1ME2 LINE L1 2336 2750 -3330 2136 81 0 0 chr18 41025784 41026056 -44962878 + AluY SINE Alu 3 274 -37 180 97 0 0 chr18 41026059 41026090 -44962844 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 1186 261 119 35 chr18 41026090 41026568 -44962366 + L1ME2 LINE L1 2751 3349 -2731 2546 252 38 22 chr18 41026640 41027542 -44961392 + L1ME2 LINE L1 3855 4770 -1310 599 240 96 10 chr18 41027531 41027896 -44961038 + L1ME2 LINE L1 5067 5461 -635 * 483 252 82 6 chr18 41027911 41028088 -44960846 + L1ME2 LINE L1 5913 6100 0 557 295 26 0 chr18 41028276 41028432 -44960502 - MIR SINE MIR -4 258 99 547 207 69 101 chr18 41028957 41029145 -44959789 + MER5A DNA MER1_type 8 189 0 197 311 156 11 chr18 41029428 41029518 -44959416 + L2 LINE L2 3168 3270 -2 2049 124 17 0 chr18 41029875 41030173 -44958761 + AluSx SINE Alu 1 303 -9 26 64 0 0 chr18 41030270 41030317 -44958617 + AT_rich Low_complexity Low_complexity 1 47 0 2891 141 38 6 chr18 41030986 41031547 -44957387 - L1M2 LINE L1 -511 5789 5211 1269 174 17 0 chr18 41031546 41031776 -44957158 + L1MA6 LINE L1 5828 6061 -239 * 934 161 35 43 chr18 41031794 41032024 -44956910 + L1MB8 LINE L1 5951 6178 0 365 279 136 66 chr18 41032120 41032407 -44956527 - MLT1L LTR MaLR -108 507 201 201 39 0 0 chr18 41033070 41033096 -44955838 + (TG)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chr18 41033360 41033381 -44955553 + AT_rich Low_complexity Low_complexity 1 21 0 306 0 0 0 chr18 41034247 41034281 -44954653 + (CA)n Simple_repeat Simple_repeat 2 35 0 32 26 0 0 chr18 41034526 41034565 -44954369 + AT_rich Low_complexity Low_complexity 1 39 0 657 209 23 0 chr18 41034587 41034716 -44954218 + AluJo SINE Alu 3 134 -178 660 291 5 30 chr18 41035831 41036034 -44952900 - MIR SINE MIR -6 256 59 987 313 80 7 chr18 41036034 41036446 -44952488 - LTR16C LTR ERVL 0 491 50 2191 57 0 17 chr18 41038728 41039025 -44949909 - AluY SINE Alu -19 292 1 360 317 98 54 chr18 41040289 41040699 -44948235 - L1ME3A LINE L1 -237 5933 5506 316 333 96 25 chr18 41040840 41041148 -44947786 - L1ME3A LINE L1 -865 5281 4996 2409 74 0 3 chr18 41041148 41041460 -44947474 - AluY SINE Alu 0 311 1 316 333 96 25 chr18 41041460 41042097 -44946837 - L1ME3A LINE L1 -1150 4996 4269 27 62 0 0 chr18 41042209 41042257 -44946677 + AT_rich Low_complexity Low_complexity 1 48 0 5512 124 8 26 chr18 41043451 41044504 -44944430 + L1PA14 LINE L1 5036 6074 -87 2060 122 0 56 chr18 41044504 41044823 -44944111 + AluSg SINE Alu 1 301 -9 5512 124 8 26 chr18 41044823 41044906 -44944028 + L1PA14 LINE L1 6074 6157 -4 471 100 0 0 chr18 41044908 41044978 -44943956 + (TA)n Simple_repeat Simple_repeat 1 70 0 220 328 0 0 chr18 41045029 41045090 -44943844 + L2 LINE L2 3207 3267 -5 1416 269 27 27 chr18 41045292 41045739 -44943195 - MER31B LTR ERV1 -19 447 1 23 33 0 0 chr18 41047911 41047941 -44940993 + AT_rich Low_complexity Low_complexity 1 30 0 3105 164 16 50 chr18 41048178 41048812 -44940122 + LTR9 LTR ERV1 1 612 0 240 254 236 18 chr18 41048817 41048927 -44940007 - L2 LINE L2 0 3313 3180 467 277 145 6 chr18 41048942 41049101 -44939833 + MLT1J1 LTR MaLR 5 185 -261 1046 200 41 48 chr18 41049125 41049354 -44939580 - L1MA7 LINE L1 -10 6281 6053 390 91 0 0 chr18 41049354 41049409 -44939525 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 1046 200 41 48 chr18 41049409 41049494 -44939440 - L1MA7 LINE L1 -238 6053 5969 277 255 0 0 chr18 41049584 41049635 -44939299 + MLT1J2 LTR MaLR 279 329 -121 21 36 0 0 chr18 41049930 41049958 -44938976 + AT_rich Low_complexity Low_complexity 1 28 0 691 201 15 0 chr18 41050453 41050587 -44938347 - LTR40a LTR ERVL 0 519 384 1031 290 24 19 chr18 41050594 41051015 -44937919 + L1ME1 LINE L1 5739 6161 -5 1211 233 0 56 chr18 41052494 41052799 -44936135 - AluJo SINE Alu -14 288 1 464 330 59 15 chr18 41053128 41053331 -44935603 - MLT1I LTR MaLR 0 409 198 2234 77 0 17 chr18 41053362 41053694 -44935240 - AluY SINE Alu 0 311 1 200 33 0 33 chr18 41056186 41056216 -44932718 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 189 175 0 0 chr18 41057621 41057661 -44931273 + GA-rich Low_complexity Low_complexity 2 41 0 237 109 0 0 chr18 41057946 41057992 -44930942 - LTR66 LTR ERVL -171 439 394 21 0 0 0 chr18 41058118 41058139 -44930795 + AT_rich Low_complexity Low_complexity 1 21 0 430 233 33 8 chr18 41061208 41061328 -44927606 - L1MC4a LINE L1 -1906 5902 5780 725 308 53 25 chr18 41061668 41061990 -44926944 + MER102b DNA MER1_type 1 331 -10 3717 171 49 38 chr18 41062030 41062804 -44926130 + LTR39 LTR ERV1 1 783 0 4827 185 25 30 chr18 41062930 41063569 -44925365 + L1MCa LINE L1 4 638 -5788 183 42 0 0 chr18 41063569 41063593 -44925341 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 4827 185 25 30 chr18 41063593 41063924 -44925010 + L1MCa LINE L1 638 969 -5457 2107 100 10 3 chr18 41064823 41065112 -44923822 - AluSx SINE Alu -21 291 1 225 167 0 0 chr18 41065881 41065923 -44923011 + C-rich Low_complexity Low_complexity 1 42 0 403 276 250 5 chr18 41066524 41066716 -44922218 + MIR SINE MIR 20 258 -4 219 287 64 64 chr18 41067060 41067154 -44921780 + MIR SINE MIR 89 182 -80 2103 121 3 16 chr18 41067499 41067806 -44921128 + AluSq SINE Alu 6 308 -5 2301 90 0 13 chr18 41068615 41068926 -44920008 - AluSg SINE Alu 0 310 4 1246 285 117 40 chr18 41069011 41069061 -44919873 - MER20B DNA MER1_type -66 717 672 2138 97 17 3 chr18 41069061 41069349 -44919585 - AluSg SINE Alu -18 292 1 1246 285 117 40 chr18 41069349 41069964 -44918970 - MER20B DNA MER1_type -111 672 1 24 0 0 0 chr18 41071294 41071318 -44917616 + AT_rich Low_complexity Low_complexity 1 24 0 462 321 75 0 chr18 41071698 41071857 -44917077 - MIR SINE MIR -39 223 53 1949 124 7 7 chr18 41072879 41073162 -44915772 - AluSp SINE Alu -20 293 11 334 267 23 23 chr18 41073343 41073429 -44915505 - MIR SINE MIR -102 106 21 485 379 75 11 chr18 41075166 41075612 -44913322 - L3 LINE CR1 -8 1569 1031 294 323 54 8 chr18 41075753 41075883 -44913051 + MIR SINE MIR 1 136 -126 474 223 45 134 chr18 41076090 41076292 -44912642 + MER5A DNA MER1_type 5 188 -1 619 293 30 20 chr18 41076579 41076777 -44912157 + MIR SINE MIR 37 236 -26 264 352 42 49 chr18 41077335 41077477 -44911457 + MIR3 SINE MIR 2 142 -66 34 24 0 0 chr18 41078457 41078498 -44910436 + AT_rich Low_complexity Low_complexity 1 41 0 1323 214 37 0 chr18 41080131 41080425 -44908509 - MER58B DNA MER1_type -11 330 26 28 0 0 0 chr18 41080737 41080765 -44908169 + AT_rich Low_complexity Low_complexity 1 28 0 203 270 0 16 chr18 41085422 41085485 -44903449 + CT-rich Low_complexity Low_complexity 2 63 0 301 343 133 23 chr18 41085725 41086122 -44902812 - L2 LINE L2 -337 2977 2537 507 211 73 32 chr18 41086521 41086644 -44902290 - MER58B DNA MER1_type -2 339 212 186 339 65 61 chr18 41088698 41088928 -44900006 - L2 LINE L2 -8 3305 3075 2139 127 6 13 chr18 41089002 41089316 -44899618 - AluSx SINE Alu 0 312 1 27 29 0 0 chr18 41089625 41089659 -44899275 + AT_rich Low_complexity Low_complexity 1 34 0 231 88 0 0 chr18 41090638 41090672 -44898262 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 373 66 33 0 chr18 41091351 41091412 -44897522 + (CA)n Simple_repeat Simple_repeat 1 63 0 203 308 56 71 chr18 41091623 41091821 -44897113 + L2 LINE L2 2550 2744 -570 21 0 0 0 chr18 41091948 41091969 -44896965 + AT_rich Low_complexity Low_complexity 1 21 0 197 331 83 30 chr18 41093029 41093198 -44895736 - MER5A DNA MER1_type -5 184 7 219 217 0 0 chr18 41093686 41093746 -44895188 + (CA)n Simple_repeat Simple_repeat 2 61 0 2330 247 94 23 chr18 41093995 41094283 -44894651 - L1ME1 LINE L1 -8 6158 5892 1869 123 27 31 chr18 41094283 41094575 -44894359 - AluSg SINE Alu -19 291 1 2330 247 94 23 chr18 41094575 41095567 -44893367 - L1ME1 LINE L1 -270 5896 4784 2443 85 3 0 chr18 41095567 41095872 -44893062 - AluY SINE Alu -5 306 1 603 314 6 0 chr18 41096634 41096793 -44892141 - MER45A DNA AcHobo -17 161 2 239 333 20 72 chr18 41096813 41096966 -44891968 - MIR SINE MIR -112 150 6 247 303 11 22 chr18 41097168 41097257 -44891677 + MER5A DNA MER1_type 27 114 -75 206 362 29 36 chr18 41097175 41097313 -44891621 - MER5A DNA MER1_type -22 167 31 * 29 0 0 0 chr18 41097765 41097794 -44891140 + AT_rich Low_complexity Low_complexity 1 29 0 2252 134 25 8 chr18 41099077 41099435 -44889499 + THE1B LTR MaLR 1 364 0 3678 103 38 0 chr18 41099552 41100086 -44888848 + MER41A LTR ERV1 1 554 0 306 221 115 41 chr18 41100205 41100327 -44888607 + MIR SINE MIR 116 246 -16 234 261 0 0 chr18 41100872 41100941 -44887993 + A-rich Low_complexity Low_complexity 1 69 0 734 220 50 40 chr18 41101577 41101777 -44887157 - MER115 DNA AcHobo -26 667 466 652 342 61 4 chr18 41101891 41102119 -44886815 - MER115 DNA AcHobo -441 252 12 221 387 46 31 chr18 41103051 41103245 -44885689 + L2 LINE L2 2897 3093 -179 277 254 0 0 chr18 41103508 41103563 -44885371 - MLT1L LTR MaLR -399 216 162 2410 63 7 0 chr18 41103579 41103878 -44885056 - AluY SINE Alu -10 301 1 1704 128 34 4 chr18 41103886 41104151 -44884783 - AluSx SINE Alu -39 273 1 1635 176 13 44 chr18 41104176 41104494 -44884440 + AluJo SINE Alu 1 308 -4 180 0 0 0 chr18 41105224 41105244 -44883690 + (CAA)n Simple_repeat Simple_repeat 2 21 0 183 80 0 0 chr18 41107672 41107697 -44881237 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 232 0 50 50 chr18 41107976 41108016 -44880918 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 361 354 19 0 chr18 41109615 41109773 -44879161 + MIR3 SINE MIR 48 208 0 451 289 0 18 chr18 41109884 41109998 -44878936 - MIR SINE MIR -63 145 34 1773 200 3 0 chr18 41110280 41110575 -44878359 + AluSx SINE Alu 1 296 -16 186 388 97 15 chr18 41111395 41111529 -44877405 + MIR3 SINE MIR 21 165 -43 22 0 0 0 chr18 41111565 41111587 -44877347 + AT_rich Low_complexity Low_complexity 1 22 0 360 273 61 8 chr18 41111589 41111721 -44877213 - MER103 DNA DNA -8 158 20 2631 103 3 13 chr18 41111861 41112240 -44876694 + THE1C LTR MaLR 1 375 0 1068 153 6 0 chr18 41112438 41112614 -44876320 + MSTA LTR MaLR 4 180 -248 1078 115 0 0 chr18 41112616 41112764 -44876170 + AluSg/x SINE Alu 161 308 -4 1288 161 25 4 chr18 41112767 41113003 -44875931 + MSTA LTR MaLR 188 428 0 858 260 24 5 chr18 41113092 41113300 -44875634 - MER20 DNA MER1_type 0 219 8 412 248 124 31 chr18 41113944 41114105 -44874829 - MIR SINE MIR -72 190 15 938 223 90 65 chr18 41114428 41114783 -44874151 - MLT1A1 LTR MaLR -1 364 1 1730 142 69 4 chr18 41115297 41115558 -44873376 + AluSx SINE Alu 3 280 -32 354 45 0 0 chr18 41115558 41115602 -44873332 + (GAAA)n Simple_repeat Simple_repeat 2 45 0 296 266 9 35 chr18 41116332 41116445 -44872489 + GA-rich Low_complexity Low_complexity 3 112 0 183 400 76 0 chr18 41116496 41116601 -44872333 + MIR SINE MIR 16 128 -80 945 307 97 3 chr18 41116759 41117111 -44871823 - MLT1I LTR MaLR -18 391 7 423 343 7 0 chr18 41117129 41117266 -44871668 + MIR SINE MIR 122 259 -3 231 233 22 67 chr18 41117309 41117399 -44871535 + L2 LINE L2 3228 3313 0 223 322 50 21 chr18 41117932 41118062 -44870872 + MIR SINE MIR 20 153 -62 211 116 47 23 chr18 41119621 41119664 -44869270 + T-rich Low_complexity Low_complexity 2 45 0 231 36 0 0 chr18 41119813 41119841 -44869093 + (TA)n Simple_repeat Simple_repeat 2 29 0 1919 142 39 0 chr18 41119841 41120122 -44868812 - AluSx SINE Alu -20 292 1 2475 84 0 0 chr18 41120360 41120671 -44868263 + AluY SINE Alu 1 311 0 2532 71 0 0 chr18 41120906 41121215 -44867719 + AluY SINE Alu 3 311 0 211 271 0 0 chr18 41121215 41121263 -44867671 + GA-rich Low_complexity Low_complexity 3 50 0 186 349 109 10 chr18 41121279 41121471 -44867463 - MIR SINE MIR -10 252 42 745 244 41 10 chr18 41121518 41121715 -44867219 - MER3 DNA MER1_type -4 205 3 4042 209 81 18 chr18 41125305 41126283 -44862651 - MER45B DNA AcHobo -1 1039 1 212 250 0 0 chr18 41126386 41126430 -44862504 - MIR SINE MIR -196 66 23 2405 179 65 42 chr18 41126562 41127154 -44861780 - MER21A LTR ERV1 0 931 228 1379 132 31 22 chr18 41127154 41127382 -44861552 - MER30 DNA MER1_type 0 230 1 2405 179 65 42 chr18 41127382 41127556 -44861378 - MER21A LTR ERV1 -703 228 60 1916 213 32 26 chr18 41128187 41128651 -44860283 + MLT1C LTR MaLR 1 467 0 202 118 29 0 chr18 41129325 41129359 -44859575 + (TG)n Simple_repeat Simple_repeat 1 35 0 387 0 0 0 chr18 41129705 41129748 -44859186 + (TG)n Simple_repeat Simple_repeat 2 44 0 321 316 7 22 chr18 41130378 41130514 -44858420 + GA-rich Low_complexity Low_complexity 3 136 0 236 306 9 36 chr18 41131322 41131433 -44857501 + GA-rich Low_complexity Low_complexity 4 111 0 1792 142 0 4 chr18 41132203 41132471 -44856463 + AluSx SINE Alu 4 270 -42 377 258 21 0 chr18 41132513 41132610 -44856324 + MLT1L LTR MaLR 45 143 -472 414 299 80 25 chr18 41132637 41132838 -44856096 + MLT1L LTR MaLR 228 439 -176 1499 156 73 14 chr18 41135130 41135418 -44853516 - MER7A DNA MER2_type 0 346 44 291 208 40 128 chr18 41135816 41135941 -44852993 - L2 LINE L2 0 3313 3200 376 259 93 0 chr18 41136908 41137016 -44851918 + MIR3 SINE MIR 52 169 -39 291 287 8 23 chr18 41137441 41137570 -44851364 + GA-rich Low_complexity Low_complexity 1 127 0 207 139 0 0 chr18 41138370 41138406 -44850528 + (TCCC)n Simple_repeat Simple_repeat 1 36 0 1956 145 0 23 chr18 41142585 41142888 -44846046 - AluSx SINE Alu -16 296 1 875 277 27 12 chr18 41143174 41143430 -44845504 + MLT1C LTR MaLR 208 467 0 1381 185 27 40 chr18 41144316 41144613 -44844321 - AluJo SINE Alu -19 293 1 283 232 13 0 chr18 41145560 41145700 -44843234 + CT-rich Low_complexity Low_complexity 1 141 0 511 181 24 24 chr18 41145810 41145976 -44842958 + CT-rich Low_complexity Low_complexity 2 167 0 266 304 24 24 chr18 41146247 41146372 -44842562 + MIR3 SINE MIR 4 128 -80 284 261 0 14 chr18 41146707 41146776 -44842158 + GA-rich Low_complexity Low_complexity 5 72 0 21 0 0 0 chr18 41147116 41147137 -44841797 + AT_rich Low_complexity Low_complexity 1 21 0 277 207 0 122 chr18 41149234 41149316 -44839618 - MER5B DNA MER1_type 0 178 107 288 0 0 0 chr18 41149360 41149392 -44839542 + (TG)n Simple_repeat Simple_repeat 2 33 0 228 167 0 0 chr18 41149410 41149458 -44839476 + (TG)n Simple_repeat Simple_repeat 1 48 0 24 0 0 0 chr18 41149664 41149688 -44839246 + AT_rich Low_complexity Low_complexity 1 24 0 1438 194 38 0 chr18 41152613 41152876 -44836058 + AluJo SINE Alu 1 273 -39 36 82 0 0 chr18 41152924 41153009 -44835925 + AT_rich Low_complexity Low_complexity 1 85 0 1649 132 96 39 chr18 41154689 41155044 -44833890 - THE1C LTR MaLR 0 375 1 180 97 0 0 chr18 41156231 41156262 -44832672 + (TTA)n Simple_repeat Simple_repeat 3 33 0 41219 47 6 0 chr18 41156262 41162368 -44826566 - L1PA4 LINE L1 -18 6137 2 268 374 30 8 chr18 41162535 41162666 -44826268 - MIR SINE MIR -56 152 19 283 333 83 42 chr18 41163595 41163763 -44825171 - MIR3 SINE MIR -21 187 13 1669 225 0 0 chr18 41165679 41165986 -44822948 - AluJb SINE Alu -5 307 1 777 272 93 116 chr18 41166942 41167498 -44821436 + HAL1 LINE L1 826 1352 -1155 665 233 0 0 chr18 41167498 41167627 -44821307 + FLAM_A SINE Alu 1 129 -4 777 272 93 116 chr18 41167627 41168033 -44820901 + HAL1 LINE L1 1352 1766 -741 21 0 0 0 chr18 41168193 41168214 -44820720 + AT_rich Low_complexity Low_complexity 1 21 0 580 113 0 0 chr18 41169298 41169378 -44819556 + AluS SINE Alu 1 80 -233 284 250 70 70 chr18 41219380 41219552 -44769382 + MER74B LTR ERVL 450 621 -1 200 333 70 47 chr18 41219562 41219691 -44769243 + MIR SINE MIR 43 174 -88 22 88 0 0 chr18 41219695 41219752 -44769182 + AT_rich Low_complexity Low_complexity 1 57 0 210 273 61 0 chr18 41219758 41219824 -44769110 + MIR SINE MIR 193 262 0 222 206 0 0 chr18 41220792 41220860 -44768074 + (TAA)n Simple_repeat Simple_repeat 2 69 0 223 266 0 25 chr18 41220969 41221048 -44767886 + A-rich Low_complexity Low_complexity 2 78 0 22 35 0 0 chr18 41221048 41221077 -44767857 + AT_rich Low_complexity Low_complexity 1 29 0 3313 240 65 35 chr18 41222018 41223234 -44765700 + L1MB7 LINE L1 2278 3545 -2601 2404 53 3 0 chr18 41223234 41223538 -44765396 - AluY SINE Alu 0 306 2 3313 240 65 35 chr18 41223538 41223726 -44765208 + L1MB7 LINE L1 3545 3726 -2420 2156 201 25 2 chr18 41223730 41224129 -44764805 + MSTB LTR MaLR 19 426 0 1696 139 35 28 chr18 41224143 41224431 -44764503 + AluSc SINE Alu 3 292 -17 8261 188 53 15 chr18 41224431 41226013 -44762921 + MSTB-int LTR MaLR 8 1649 -2 2032 180 81 2 chr18 41226015 41226410 -44762524 + MSTB LTR MaLR 1 426 0 4386 242 71 26 chr18 41226410 41227843 -44761091 + L1MB7 LINE L1 3718 5234 -912 2386 81 0 0 chr18 41227843 41228141 -44760793 + AluY SINE Alu 1 298 -13 4386 242 71 26 chr18 41228141 41228319 -44760615 + L1MB7 LINE L1 5234 5402 -744 451 206 0 19 chr18 41228331 41228438 -44760496 + L1MB7 LINE L1 5367 5471 -713 804 198 103 35 chr18 41228438 41228670 -44760264 - MER76 LTR ERV 0 688 441 656 159 43 7 chr18 41228715 41228853 -44760081 - MER76 LTR ERV -518 170 28 400 113 0 0 chr18 41228854 41228939 -44759995 - AluS SINE Alu 0 316 232 2435 199 89 4 chr18 41228939 41229501 -44759433 + L1MB7 LINE L1 5567 6176 -8 187 330 110 31 chr18 41230799 41231090 -44757844 - L2 LINE L2 -616 2698 2289 481 268 73 81 chr18 41231408 41231793 -44757141 - L1MC4 LINE L1 -635 7407 7026 22 0 0 0 chr18 41231907 41231929 -44757005 + AT_rich Low_complexity Low_complexity 1 22 0 449 269 141 86 chr18 41231978 41232087 -44756847 - L1MC4 LINE L1 -1214 6781 6679 183 42 0 0 chr18 41232087 41232111 -44756823 + (CA)n Simple_repeat Simple_repeat 1 24 0 449 269 141 86 chr18 41232111 41232293 -44756641 - L1MC4 LINE L1 -1316 6679 6479 243 215 0 0 chr18 41232405 41232470 -44756464 + GA-rich Low_complexity Low_complexity 2 66 0 213 122 41 20 chr18 41235795 41235844 -44753090 + (CAAA)n Simple_repeat Simple_repeat 2 51 0 2197 85 0 7 chr18 41235845 41236126 -44752808 + AluY SINE Alu 1 279 -32 207 0 0 0 chr18 41236128 41236151 -44752783 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr18 41236330 41236352 -44752582 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr18 41236517 41236540 -44752394 + AT_rich Low_complexity Low_complexity 1 23 0 3897 212 22 22 chr18 41236722 41237535 -44751399 + MER21B LTR ERV1 1 813 -50 446 376 72 13 chr18 41238654 41239045 -44749889 - L2 LINE L2 -569 2745 2332 564 316 49 23 chr18 41239063 41239367 -44749567 + MLT1I LTR MaLR 85 396 -13 1444 227 42 61 chr18 41239658 41240130 -44748804 + MLT1C LTR MaLR 1 463 -4 337 185 8 34 chr18 41240569 41240688 -44748246 + GA-rich Low_complexity Low_complexity 1 116 0 207 114 0 0 chr18 41240955 41240990 -44747944 + (TAGA)n Simple_repeat Simple_repeat 2 36 0 2112 128 10 0 chr18 41241000 41241305 -44747629 + AluSx SINE Alu 1 308 -4 198 103 0 0 chr18 41241478 41241507 -44747427 + (TATAG)n Simple_repeat Simple_repeat 3 31 0 267 325 84 37 chr18 41241705 41241896 -44747038 - MIR SINE MIR -29 233 34 5276 156 82 16 chr18 41243476 41243652 -44745282 + Tigger3b DNA MER2_type 120 283 -2745 312 27 0 0 chr18 41243652 41243689 -44745245 + (TC)n Simple_repeat Simple_repeat 1 37 0 5276 156 82 16 chr18 41243689 41244554 -44744380 + Tigger3b DNA MER2_type 283 1230 -1 1568 226 43 6 chr18 41244862 41245212 -44743722 + MLT1A1 LTR MaLR 1 363 -2 915 195 32 59 chr18 41247200 41247427 -44741507 + MER33 DNA MER1_type 1 220 -2365 494 31 16 0 chr18 41247427 41247491 -44741443 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 2091 112 3 3 chr18 41247491 41247777 -44741157 - AluSc SINE Alu -23 286 1 915 195 32 59 chr18 41247777 41247860 -44741074 + MER33 DNA MER1_type 218 291 -33 658 349 72 57 chr18 41248077 41249146 -44739788 + L2 LINE L2 2216 3312 -1 302 312 29 36 chr18 41250395 41250533 -44738401 - MIR3 SINE MIR -7 201 65 263 128 0 0 chr18 41251352 41251391 -44737543 - MLT1A2 LTR MaLR 0 374 336 276 200 0 0 chr18 41251629 41251709 -44737225 + (TA)n Simple_repeat Simple_repeat 1 80 0 1414 253 164 40 chr18 41251728 41251838 -44737096 - L1M4 LINE L1 -905 5241 5146 2426 77 0 3 chr18 41251838 41252150 -44736784 - AluY SINE Alu 0 311 1 1414 253 164 40 chr18 41252150 41252884 -44736050 - L1M4 LINE L1 -1000 5146 4292 22 70 0 0 chr18 41253160 41253203 -44735731 + AT_rich Low_complexity Low_complexity 1 43 0 200 57 0 57 chr18 41253545 41253580 -44735354 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 487 265 22 0 chr18 41260383 41260519 -44728415 + MER74A LTR ERVL 5 143 -415 379 258 43 0 chr18 41260682 41260845 -44728089 + (TA)n Simple_repeat Simple_repeat 1 170 0 226 297 17 34 chr18 41260788 41260963 -44727971 + (CATATA)n Simple_repeat Simple_repeat 2 173 0 * 410 224 59 0 chr18 41260939 41261109 -44727825 + (TA)n Simple_repeat Simple_repeat 1 180 0 1189 255 42 37 chr18 41261119 41261619 -44727315 + L1ME2 LINE L1 5592 6078 -86 4964 85 135 1 chr18 41262267 41262995 -44725939 - LTR12 LTR ERV1 -1 825 1 585 241 38 209 chr18 41263388 41263891 -44725043 + L2 LINE L2 2895 3311 -2 4750 162 32 36 chr18 41264427 41265403 -44723531 + L1MA9 LINE L1 5339 6310 -2 382 316 99 20 chr18 41266374 41266719 -44722215 - L1ME3 LINE L1 -280 5882 5511 1045 277 66 83 chr18 41266722 41267436 -44721498 + MER20B DNA MER1_type 1 702 -81 314 277 168 42 chr18 41267672 41267910 -44721024 - L1ME3 LINE L1 -747 5399 5132 23 68 0 0 chr18 41270229 41270273 -44718661 + AT_rich Low_complexity Low_complexity 1 44 0 30 69 0 0 chr18 41270333 41270391 -44718543 + AT_rich Low_complexity Low_complexity 1 58 0 211 106 64 0 chr18 41271887 41271934 -44717000 + (TA)n Simple_repeat Simple_repeat 2 51 0 386 212 56 66 chr18 41271974 41272172 -44716762 - MER5C DNA MER1_type -60 264 69 1491 201 10 24 chr18 41272195 41272505 -44716429 + MLT1A1 LTR MaLR 19 319 -46 182 266 298 0 chr18 41272541 41272635 -44716299 - L2 LINE L2 0 3313 3192 1220 204 80 22 chr18 41272726 41273000 -44715934 + AluJo SINE Alu 3 292 -10 383 280 0 0 chr18 41273125 41273218 -44715716 + MER5A DNA MER1_type 20 112 -77 760 301 0 0 chr18 41273249 41273422 -44715512 - MER5A DNA MER1_type -16 173 1 313 336 29 14 chr18 41273442 41273582 -44715352 + MER5A DNA MER1_type 26 167 -22 29 84 0 0 chr18 41274789 41274860 -44714074 + AT_rich Low_complexity Low_complexity 1 71 0 21 82 0 0 chr18 41274920 41274969 -44713965 + AT_rich Low_complexity Low_complexity 1 49 0 25 31 0 0 chr18 41275271 41275303 -44713631 + AT_rich Low_complexity Low_complexity 1 32 0 246 105 0 0 chr18 41275308 41275346 -44713588 + (TG)n Simple_repeat Simple_repeat 1 38 0 291 328 39 0 chr18 41276789 41276917 -44712017 + L1ME3A LINE L1 4475 4607 -1539 9519 47 6 0 chr18 41276917 41278864 -44710070 + L1PA5 LINE L1 4196 6147 -7 328 278 58 58 chr18 41278918 41279109 -44709825 - L2 LINE L2 -652 2662 2472 356 217 12 0 chr18 41279109 41279192 -44709742 + L1MB5 LINE L1 5806 5889 -285 234 0 0 0 chr18 41279312 41279338 -44709596 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 1241 191 30 4 chr18 41279360 41279614 -44709320 + L1MB5 LINE L1 5886 6142 -32 1286 161 8 79 chr18 41279614 41279881 -44709053 + AluJo SINE Alu 60 307 -5 229 329 20 34 chr18 41280240 41280389 -44708545 + L1ME3A LINE L1 4887 5033 -1113 806 293 70 30 chr18 41280432 41280801 -44708133 + MSTD LTR MaLR 1 384 -12 435 277 92 20 chr18 41280810 41281005 -44707929 + L1ME3A LINE L1 5078 5286 -860 656 303 74 34 chr18 41281064 41281539 -44707395 + L1ME3A LINE L1 5342 5835 -335 928 329 31 12 chr18 41282406 41282731 -44706203 - LTR16A LTR ERVL -13 437 107 24 85 0 0 chr18 41283090 41283149 -44705785 + AT_rich Low_complexity Low_complexity 1 59 0 187 294 20 0 chr18 41283308 41283359 -44705575 + L2 LINE L2 2985 3036 -277 453 242 0 11 chr18 41283456 41283564 -44705370 + MER39 LTR ERV1 4 110 -432 955 341 56 15 chr18 41283598 41284006 -44704928 + L2 LINE L2 2372 2796 -518 3329 158 38 31 chr18 41284929 41285569 -44703365 + LTR48B LTR ERV1 1 644 0 1489 194 60 43 chr18 41285571 41285921 -44703013 + LTR48B-int LTR ERV1 1 356 -5975 * 2163 194 10 38 chr18 41285895 41286691 -44702243 + LTR49-int LTR ERV1 361 1595 -3285 287 281 86 39 chr18 41287929 41288057 -44700877 - MIR3 SINE MIR -52 156 23 2039 134 7 0 chr18 41288528 41288827 -44700107 + AluSq SINE Alu 13 313 0 406 153 0 14 chr18 41289143 41289215 -44699719 - MLT1A1 LTR MaLR -294 71 1 264 294 59 29 chr18 41289508 41289610 -44699324 - MIR SINE MIR -64 144 40 375 345 110 62 chr18 41290888 41291387 -44697547 + L3 LINE CR1 76 598 -979 205 318 156 32 chr18 41291523 41291863 -44697071 + L3 LINE CR1 645 1026 -551 198 0 0 0 chr18 41292030 41292052 -44696882 + (A)n Simple_repeat Simple_repeat 1 22 0 4314 193 34 54 chr18 41292052 41293553 -44695381 + L1M4c LINE L1 1445 2914 -3468 2615 209 11 20 chr18 41293554 41294161 -44694773 + L1MB2 LINE L1 5561 6162 -9 21 89 0 0 chr18 41294170 41294226 -44694708 + AT_rich Low_complexity Low_complexity 1 56 0 388 255 90 110 chr18 41295219 41295619 -44693315 - L1ME4a LINE L1 -6 6115 5724 218 200 0 0 chr18 41295665 41295710 -44693224 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 2202 191 102 6 chr18 41295727 41296235 -44692699 - MER89 LTR ERV1 -2 557 1 226 253 53 80 chr18 41296237 41296387 -44692547 + L1M4c LINE L1 2915 3060 -3322 24 0 0 0 chr18 41296541 41296565 -44692369 + AT_rich Low_complexity Low_complexity 1 24 0 344 218 23 23 chr18 41296574 41296661 -44692273 + L1M4c LINE L1 3180 3266 -3116 2170 228 98 60 chr18 41296749 41296879 -44692055 - L1MC4 LINE L1 -29 8013 7889 1934 158 7 0 chr18 41296879 41297189 -44691745 - AluSx SINE Alu 0 312 1 2170 228 98 60 chr18 41297189 41297994 -44690940 - L1MC4 LINE L1 -153 7889 7042 193 0 94 0 chr18 41297994 41298026 -44690908 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr18 41298190 41298212 -44690722 + AT_rich Low_complexity Low_complexity 1 22 0 2278 62 0 71 chr18 41298224 41298547 -44690387 - AluY SINE Alu -11 300 1 228 328 53 23 chr18 41298846 41298977 -44689957 - L2 LINE L2 -191 3081 2947 1680 105 0 39 chr18 41300607 41300912 -44688022 - AluSc SINE Alu -16 293 1 511 273 67 108 chr18 41300950 41301536 -44687398 + L1MCc LINE L1 677 1238 -4888 404 286 77 13 chr18 41301533 41301844 -44687090 + L1MCc LINE L1 1461 1791 -5034 * 258 81 0 0 chr18 41301894 41301931 -44687003 + (CA)n Simple_repeat Simple_repeat 1 37 0 963 114 23 0 chr18 41302381 41302513 -44686421 + AluSg SINE Alu 1 135 -175 554 250 87 69 chr18 41302545 41302993 -44685941 + L1MCc LINE L1 949 1404 -5138 306 0 0 0 chr18 41302996 41303030 -44685904 + (CA)n Simple_repeat Simple_repeat 1 34 0 362 268 26 20 chr18 41303030 41303183 -44685751 + L1MCc LINE L1 1453 1606 -4936 554 284 72 40 chr18 41303283 41303811 -44685123 + L1MCc LINE L1 1969 2456 -4188 26 50 0 0 chr18 41303905 41303945 -44684989 + AT_rich Low_complexity Low_complexity 1 40 0 1756 241 59 42 chr18 41304072 41304787 -44684147 + L1MB8 LINE L1 5295 6021 -157 1523 154 8 4 chr18 41305569 41305822 -44683112 - MER2 DNA MER2_type -90 255 2 1187 233 35 65 chr18 41305943 41306498 -44682436 + MER39 LTR ERV1 9 707 0 9384 226 59 19 chr18 41306889 41307025 -44681909 + L1MA9 LINE L1 3101 3230 -3877 199 53 26 26 chr18 41307025 41307063 -44681871 + (TA)n Simple_repeat Simple_repeat 1 38 0 9384 226 59 19 chr18 41307063 41309244 -44679690 + L1MA9 LINE L1 3230 5322 -1785 1805 117 47 33 chr18 41309244 41309544 -44679390 + AluSg SINE Alu 1 304 -6 396 0 0 0 chr18 41309546 41309590 -44679344 + (CA)n Simple_repeat Simple_repeat 2 45 0 9384 226 59 19 chr18 41309590 41311072 -44677862 + L1MA9 LINE L1 5322 7069 -38 188 238 16 0 chr18 41311517 41311580 -44677354 + T-rich Low_complexity Low_complexity 4 67 0 2426 206 31 19 chr18 41312870 41313457 -44675477 - L1MD3 LINE L1 -10 7985 7392 414 208 0 108 chr18 41313463 41313583 -44675351 - MLT1F1 LTR MaLR -460 107 1 262 179 30 15 chr18 41313584 41313651 -44675283 - L1MD3 LINE L1 -718 7277 7210 33 43 0 0 chr18 41313797 41313844 -44675090 + AT_rich Low_complexity Low_complexity 1 47 0 2979 198 38 2 chr18 41317221 41317859 -44671075 - L1MA6 LINE L1 0 6300 5640 729 119 17 25 chr18 41317885 41318003 -44670931 - AluSx SINE Alu -15 297 181 934 133 0 0 chr18 41318003 41318131 -44670803 - AluSx SINE Alu -183 130 3 1483 247 29 80 chr18 41318244 41318791 -44670143 - LTR40a LTR ERVL 0 519 1 229 307 33 73 chr18 41319077 41319227 -44669707 + MIR SINE MIR 80 223 -39 328 328 62 11 chr18 41319765 41319942 -44668992 + MIR SINE MIR 14 146 -62 216 0 0 0 chr18 41320018 41320042 -44668892 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2040 125 0 0 chr18 41320042 41320322 -44668612 - AluSx SINE Alu -32 280 1 2622 225 34 21 chr18 41320323 41321079 -44667855 - L1 LINE L1 -2390 3756 2991 186 381 0 0 chr18 41321183 41321246 -44667688 + L3 LINE CR1 1294 1356 -221 225 0 0 0 chr18 41321260 41321285 -44667649 + (TA)n Simple_repeat Simple_repeat 2 26 0 275 380 0 18 chr18 41321338 41321451 -44667483 + L3 LINE CR1 1457 1567 -10 28 0 0 0 chr18 41322649 41322677 -44666257 + AT_rich Low_complexity Low_complexity 1 28 0 6986 175 50 7 chr18 41322680 41324056 -44664878 + L1M4c LINE L1 21 1459 -4925 2042 157 0 0 chr18 41324056 41324368 -44664566 + AluSx SINE Alu 1 312 0 2222 172 10 24 chr18 41324502 41324919 -44664015 + MER61E LTR ERV1 121 779 0 660 204 20 26 chr18 41324919 41325068 -44663866 + LTR48B LTR ERV1 497 644 0 31 68 0 0 chr18 41325549 41325608 -44663326 + AT_rich Low_complexity Low_complexity 1 59 0 21 0 0 0 chr18 41325759 41325780 -44663154 + AT_rich Low_complexity Low_complexity 1 21 0 79 48 0 20 chr18 41325810 41325957 -44662977 + AT_rich Low_complexity Low_complexity 1 144 0 395 181 14 0 chr18 41326260 41326332 -44662602 + AluSq/x SINE Alu 46 118 -184 27 0 0 0 chr18 41326456 41326483 -44662451 + AT_rich Low_complexity Low_complexity 1 27 0 8233 200 60 67 chr18 41326540 41327016 -44661918 + LTR48B-int LTR ERV1 1986 2464 -3867 2057 139 3 0 chr18 41327016 41327319 -44661615 + AluSq SINE Alu 1 304 -9 8233 200 60 67 chr18 41327319 41329603 -44659331 + LTR48B-int LTR ERV1 2464 6150 -181 1776 203 20 30 chr18 41329722 41330121 -44658813 + LTR48B LTR ERV1 2 396 -248 213 333 33 11 chr18 41330576 41330666 -44658268 - MIR SINE MIR -70 138 47 180 0 0 0 chr18 41331625 41331645 -44657289 + (A)n Simple_repeat Simple_repeat 1 20 0 1927 171 117 5 chr18 41332574 41332959 -44655975 + MSTA LTR MaLR 1 428 0 301 178 22 28 chr18 41333343 41333432 -44655502 + LTR48B LTR ERV1 1 88 -534 * 2206 176 22 25 chr18 41333417 41333865 -44655069 + MER39 LTR ERV1 261 707 0 579 152 0 0 chr18 41336174 41336266 -44652668 + AluJ/FLAM SINE Alu 2 93 -219 569 270 0 34 chr18 41336266 41336414 -44652520 + MER58A DNA MER1_type 39 181 -43 189 305 31 55 chr18 41336450 41336578 -44652356 - L2 LINE L2 -474 2840 2716 2264 75 7 0 chr18 41337141 41337433 -44651501 - AluY SINE Alu -17 294 1 1913 157 3 0 chr18 41337483 41337782 -44651152 + AluSq SINE Alu 1 300 -13 1707 170 0 42 chr18 41339283 41339595 -44649339 + AluJb SINE Alu 1 299 -13 21 71 0 0 chr18 41339726 41339768 -44649166 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr18 41341595 41341616 -44647318 + AT_rich Low_complexity Low_complexity 1 21 0 432 221 35 76 chr18 41341833 41342005 -44646929 + MER58C DNA MER1_type 51 215 0 235 207 195 0 chr18 41343387 41343469 -44645465 + L1MC4 LINE L1 6601 6698 -1344 486 245 0 0 chr18 41343477 41343628 -44645306 + (TA)n Simple_repeat Simple_repeat 2 152 0 221 171 12 37 chr18 41343738 41343820 -44645114 + (TA)n Simple_repeat Simple_repeat 2 81 0 256 159 16 16 chr18 41343886 41343949 -44644985 + (TA)n Simple_repeat Simple_repeat 2 64 0 3392 107 66 0 chr18 41346269 41346813 -44642121 + LTR19B LTR ERV1 1 580 0 2001 191 62 0 chr18 41347506 41347909 -44641025 + MSTB1 LTR MaLR 1 428 -4 21 36 0 0 chr18 41347928 41347956 -44640978 + AT_rich Low_complexity Low_complexity 1 28 0 204 97 0 0 chr18 41348017 41348048 -44640886 + (TG)n Simple_repeat Simple_repeat 1 31 0 25 51 0 0 chr18 41348165 41348204 -44640730 + AT_rich Low_complexity Low_complexity 1 39 0 1467 214 25 75 chr18 41348822 41348904 -44640030 - Charlie1b DNA MER1_type -2307 454 369 642 174 8 8 chr18 41348904 41349036 -44639898 - FLAM_C SINE Alu -1 132 1 1467 214 25 75 chr18 41349036 41349154 -44639780 - Charlie1b DNA MER1_type -2392 369 247 1873 188 89 10 chr18 41349154 41349547 -44639387 - MSTA LTR MaLR -4 424 1 1467 214 25 75 chr18 41349547 41349822 -44639112 - Charlie1b DNA MER1_type -2514 247 2 24 32 0 0 chr18 41350655 41350686 -44638248 + AT_rich Low_complexity Low_complexity 1 31 0 403 57 0 0 chr18 41350698 41350751 -44638183 + AluY SINE Alu 84 136 -175 29459 44 38 2 chr18 41350751 41354517 -44634417 + L1P LINE L1 3 3903 -2243 1250 232 25 37 chr18 41354625 41354952 -44633982 + LTR49-int LTR ERV1 967 1289 -5042 403 225 22 99 chr18 41355121 41355303 -44633631 + LTR49-int LTR ERV1 1556 1723 -4608 1090 267 40 4 chr18 41355347 41355624 -44633310 + LTR49-int LTR ERV1 1814 2100 -4231 357 229 97 73 chr18 41355619 41355907 -44633027 + LTR57-int LTR ERVL 868 1162 -4181 * 1073 207 94 10 chr18 41355664 41355963 -44632971 + LTR49-int LTR ERV1 2949 3272 -3059 482 188 27 36 chr18 41356015 41356127 -44632807 + LTR49-int LTR ERV1 3264 3374 -2957 24 0 0 0 chr18 41356312 41356336 -44632598 + AT_rich Low_complexity Low_complexity 1 24 0 8758 33 5 1 chr18 41356556 41358391 -44630543 - L1PA2 LINE L1 -8 6147 4308 4704 255 53 27 chr18 41358515 41359763 -44629171 - L1PBb LINE L1 -3454 3395 2033 1977 120 14 7 chr18 41359763 41360093 -44628841 - AluSx SINE Alu 0 332 1 4704 255 53 27 chr18 41360093 41360811 -44628123 - L1PBb LINE L1 -4816 2033 1335 274 233 56 44 chr18 41360796 41360886 -44628048 - L1PBb LINE L1 -5286 1563 1473 * 458 332 89 43 chr18 41361843 41362147 -44626787 - L1PBb LINE L1 -6520 330 13 929 268 109 22 chr18 41362945 41363693 -44625241 + L1ME LINE L1 4640 5441 -729 229 260 0 26 chr18 41364714 41364791 -44624143 + (TAA)n Simple_repeat Simple_repeat 1 75 0 438 79 0 0 chr18 41364791 41364854 -44624080 + (TATG)n Simple_repeat Simple_repeat 2 64 0 2265 110 0 0 chr18 41364866 41365165 -44623769 - AluSx SINE Alu -13 299 1 2098 113 3 3 chr18 41366328 41366628 -44622306 + AluSq SINE Alu 1 300 -13 416 246 187 12 chr18 41366681 41366852 -44622082 + MIR SINE MIR 32 232 -30 5578 155 51 57 chr18 41368339 41369577 -44619357 + Tigger3b DNA MER2_type 2 1231 0 331 321 67 0 chr18 41371154 41371319 -44617615 + L1ME LINE L1 5612 5787 -334 21 57 0 0 chr18 41371325 41371360 -44617574 + AT_rich Low_complexity Low_complexity 1 35 0 236 325 225 0 chr18 41371519 41371639 -44617295 + L2 LINE L2 3150 3296 -17 313 209 0 15 chr18 41371996 41372063 -44616871 + MIR SINE MIR 89 154 -108 2270 242 68 17 chr18 41372530 41373279 -44615655 - L1ME1 LINE L1 -30 6136 5350 230 271 0 0 chr18 41373737 41373785 -44615149 - L2 LINE L2 -15 3298 3251 447 311 122 0 chr18 41375495 41375643 -44613291 - MIR3 SINE MIR -6 202 37 290 228 13 13 chr18 41376156 41376235 -44612699 - MLT1A1 LTR MaLR 0 365 287 31 44 0 0 chr18 41376235 41376280 -44612654 + AT_rich Low_complexity Low_complexity 1 45 0 2513 274 75 37 chr18 41376602 41377662 -44611272 + L1ME1 LINE L1 35 1135 -5261 2400 274 78 14 chr18 41377660 41377887 -44611047 + L1ME1 LINE L1 3593 3804 -2411 * 1861 160 144 5 chr18 41377887 41378261 -44610673 + MSTA LTR MaLR 3 428 0 2400 274 78 14 chr18 41378261 41378987 -44609947 + L1ME1 LINE L1 3804 4607 -1608 2041 132 10 6 chr18 41379010 41379321 -44609613 - AluSx SINE Alu 0 312 1 1686 243 51 43 chr18 41379324 41380121 -44608813 + L1ME1 LINE L1 5138 5939 -296 1246 171 30 30 chr18 41380164 41380398 -44608536 + AluJb SINE Alu 3 236 -76 219 36 0 0 chr18 41380420 41380448 -44608486 + (TTA)n Simple_repeat Simple_repeat 3 30 0 7524 25 0 0 chr18 41380448 41381877 -44607057 - L1PA3 LINE L1 -18 6137 4706 1512 39 0 0 chr18 41381877 41382057 -44606877 + L1PA3 LINE L1 4516 4695 -1451 357 257 0 0 chr18 41382057 41382249 -44606685 + AluJb SINE Alu 226 417 0 518 282 100 18 chr18 41382253 41382473 -44606461 + L1ME1 LINE L1 5998 6235 0 1044 261 81 29 chr18 41384601 41385080 -44603854 - MLT1D LTR MaLR -1 504 1 360 330 89 25 chr18 41385109 41385312 -44603622 + MIR SINE MIR 5 220 -42 9095 210 74 75 chr18 41385599 41387524 -44601410 - L1MB3 LINE L1 0 7204 5278 3340 72 0 0 chr18 41387524 41387956 -44600978 - L1PA6 LINE L1 -1 6153 5722 9095 210 74 75 chr18 41387956 41388324 -44600610 - L1MB3 LINE L1 -1926 5278 4911 2130 182 9 46 chr18 41388324 41388763 -44600171 + MSTB LTR MaLR 4 426 0 9095 210 74 75 chr18 41388763 41391136 -44597798 - L1MB3 LINE L1 -2293 4911 2217 1266 238 37 52 chr18 41391136 41391485 -44597449 - MER2 DNA MER2_type -1 344 1 9095 210 74 75 chr18 41391485 41392897 -44596037 - L1MB3 LINE L1 -4987 2217 804 183 100 0 0 chr18 41393117 41393147 -44595787 + (TC)n Simple_repeat Simple_repeat 1 30 0 279 0 0 0 chr18 41393147 41393178 -44595756 + (TG)n Simple_repeat Simple_repeat 1 31 0 709 183 43 111 chr18 41393305 41393540 -44595394 - MER20 DNA MER1_type 0 219 1 25 51 0 0 chr18 41393703 41393742 -44595192 + AT_rich Low_complexity Low_complexity 1 39 0 259 145 29 0 chr18 41394030 41394099 -44594835 + (TA)n Simple_repeat Simple_repeat 2 72 0 24 53 0 0 chr18 41394665 41394703 -44594231 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr18 41394967 41394988 -44593946 + AT_rich Low_complexity Low_complexity 1 21 0 2216 113 0 0 chr18 41395011 41395312 -44593622 + AluSg SINE Alu 1 301 -9 1318 213 65 52 chr18 41395313 41395434 -44593500 - MLT1C LTR MaLR -59 408 290 2614 105 11 5 chr18 41395434 41395807 -44593127 - THE1C LTR MaLR 0 375 1 1318 213 65 52 chr18 41395807 41396088 -44592846 - MLT1C LTR MaLR -177 290 1 1074 287 120 13 chr18 41396425 41397202 -44591732 + L1M4 LINE L1 2806 3665 -2481 * 4194 222 25 16 chr18 41397200 41398210 -44590724 - L1 LINE L1 -1920 5247 4229 1810 237 18 35 chr18 41398245 41398734 -44590200 - L1 LINE L1 -4951 2217 1737 1244 337 57 35 chr18 41398795 41399573 -44589361 - L1MB3 LINE L1 -6372 796 2 246 254 32 16 chr18 41401731 41401794 -44587140 - MIR SINE MIR 0 262 199 416 232 216 0 chr18 41402101 41402226 -44586708 - MIR SINE MIR -66 196 45 210 277 36 89 chr18 41402323 41402435 -44586499 + MIR3 SINE MIR 98 203 -5 412 279 93 25 chr18 41402603 41402840 -44586094 + L1ME4a LINE L1 5710 5962 -159 411 286 54 7 chr18 41404029 41404176 -44584758 + L2 LINE L2 3155 3308 -5 405 0 0 0 chr18 41404985 41405030 -44583904 + (TG)n Simple_repeat Simple_repeat 1 45 0 191 356 46 11 chr18 41405060 41405147 -44583787 + L3b LINE CR1 1465 1554 -29 22 35 0 0 chr18 41406399 41406428 -44582506 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr18 41407007 41407028 -44581906 + AT_rich Low_complexity Low_complexity 1 21 0 277 335 89 19 chr18 41408841 41408999 -44579935 + MIR SINE MIR 46 214 -48 249 375 23 0 chr18 41409104 41409232 -44579702 - MIR SINE MIR -31 231 101 2252 104 45 0 chr18 41410577 41410934 -44578000 - L1MA1 LINE L1 -9 6293 5921 398 312 147 13 chr18 41410938 41411095 -44577839 + L2 LINE L2 2180 2357 -957 1806 127 0 8 chr18 41411099 41411366 -44577568 + AluSg1 SINE Alu 40 304 -5 24 0 0 0 chr18 41412231 41412255 -44576679 + AT_rich Low_complexity Low_complexity 1 24 0 186 280 0 20 chr18 41413514 41413564 -44575370 + L2 LINE L2 3261 3309 -4 223 176 0 59 chr18 41414079 41414130 -44574804 - L2 LINE L2 -93 3220 3173 21 0 0 0 chr18 41414596 41414617 -44574317 + AT_rich Low_complexity Low_complexity 1 21 0 213 156 44 0 chr18 41418359 41418404 -44570530 + GA-rich Low_complexity Low_complexity 1 47 0 872 269 9 22 chr18 41418525 41418752 -44570182 - MER58A DNA MER1_type 0 224 1 357 127 127 0 chr18 41419204 41419275 -44569659 - MADE1 DNA Mariner 0 80 1 276 149 0 0 chr18 41419354 41419401 -44569533 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 7114 42 15 0 chr18 41419403 41420764 -44568170 - L1PA6 LINE L1 0 6154 4785 339 25 0 0 chr18 41421971 41422011 -44566923 + (CA)n Simple_repeat Simple_repeat 1 40 0 413 300 74 39 chr18 41422474 41422731 -44566203 + MLT1L LTR MaLR 3 268 -347 360 154 15 15 chr18 41422732 41422797 -44566137 - MIR SINE MIR -161 101 37 432 265 173 0 chr18 41423293 41423413 -44565521 + MER3 DNA MER1_type 2 158 -51 180 0 0 0 chr18 41423413 41423433 -44565501 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 432 265 173 0 chr18 41423433 41423474 -44565460 + MER3 DNA MER1_type 158 191 -18 288 307 70 0 chr18 41424302 41424416 -44564518 + MIR SINE MIR 21 142 -66 2019 207 17 82 chr18 41424545 41425082 -44563852 + MLT2B2 LTR ERVL 3 504 -11 1996 123 4 0 chr18 41425794 41426106 -44562828 - AluSc SINE Alu 0 313 1 21 0 0 0 chr18 41426798 41426819 -44562115 + AT_rich Low_complexity Low_complexity 1 21 0 2626 30 3 0 chr18 41426968 41427270 -44561664 - AluY SINE Alu -8 303 1 244 359 26 32 chr18 41427318 41427474 -44561460 + MIR SINE MIR 13 167 -95 297 0 0 0 chr18 41427686 41427719 -44561215 + (CCAA)n Simple_repeat Simple_repeat 2 34 0 1443 209 30 23 chr18 41428640 41428941 -44559993 - AluJo SINE Alu -9 303 1 23 0 0 0 chr18 41431649 41431672 -44557262 + AT_rich Low_complexity Low_complexity 1 23 0 187 339 18 18 chr18 41432027 41432083 -44556851 + MIR SINE MIR 17 72 -136 189 74 0 0 chr18 41432395 41432422 -44556512 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 315 65 0 0 chr18 41432543 41432589 -44556345 + (CA)n Simple_repeat Simple_repeat 1 46 0 320 62 62 0 chr18 41432737 41432801 -44556133 + (TA)n Simple_repeat Simple_repeat 1 68 0 180 0 0 0 chr18 41434541 41434561 -44554373 + (TTTTTA)n Simple_repeat Simple_repeat 2 21 0 203 341 126 30 chr18 41435047 41435182 -44553752 - L3 LINE CR1 -1 1576 1429 1513 199 16 29 chr18 41435855 41436166 -44552768 + AluJo SINE Alu 5 311 -1 1023 85 0 0 chr18 41436317 41436447 -44552487 - AluY SINE Alu -151 160 31 335 284 0 0 chr18 41436450 41436538 -44552396 + LTR16C LTR ERVL 373 460 -31 186 204 19 37 chr18 41436769 41436823 -44552111 - MIR SINE MIR -40 222 170 414 288 119 23 chr18 41436862 41437039 -44551895 + MIR3 SINE MIR 4 197 -11 218 380 14 0 chr18 41437076 41437147 -44551787 - MIR SINE MIR -99 109 38 216 335 82 6 chr18 41437233 41437403 -44551531 - MIR SINE MIR -60 202 20 504 306 6 6 chr18 41438213 41438373 -44550561 - MIR SINE MIR -13 249 90 252 86 0 0 chr18 41439432 41439467 -44549467 + (A)n Simple_repeat Simple_repeat 1 35 0 257 379 0 9 chr18 41439657 41439773 -44549161 + MIR3 SINE MIR 92 206 -2 345 163 0 23 chr18 41440558 41440803 -44548131 + AluJo SINE Alu 2 302 0 1446 235 33 60 chr18 41441222 41441741 -44547193 + MLT1D LTR MaLR 1 505 0 27 29 0 0 chr18 41441780 41441814 -44547120 + AT_rich Low_complexity Low_complexity 1 34 0 3618 210 27 26 chr18 41442877 41443913 -44545021 + L1MB4 LINE L1 4366 5402 -744 3105 205 46 4 chr18 41443920 41444613 -44544321 + L1MB4 LINE L1 5458 6179 -1 43 20 0 0 chr18 41444788 41444838 -44544096 + AT_rich Low_complexity Low_complexity 1 50 0 192 218 128 39 chr18 41446755 41446833 -44542101 - L2 LINE L2 0 3272 3188 212 184 0 0 chr18 41448177 41448215 -44540719 + A-rich Low_complexity Low_complexity 1 38 0 1883 111 8 0 chr18 41449352 41449613 -44539321 - AluSg SINE Alu -3 307 45 414 0 0 0 chr18 41449861 41449907 -44539027 + (TA)n Simple_repeat Simple_repeat 2 47 0 1943 129 7 7 chr18 41451115 41451410 -44537524 - AluSx SINE Alu -17 295 1 190 253 89 25 chr18 41451450 41451529 -44537405 - MIR SINE MIR -56 206 123 999 240 0 18 chr18 41451857 41452086 -44536848 + AluJo SINE Alu 64 288 -24 319 287 74 25 chr18 41452089 41452211 -44536723 - MIR SINE MIR -125 137 10 357 319 151 16 chr18 41452229 41452414 -44536520 - MIR SINE MIR -49 213 4 819 316 28 25 chr18 41453699 41454057 -44534877 + LTR16C LTR ERVL 2 360 -131 605 158 0 17 chr18 41454062 41454182 -44534752 - AluY SINE Alu -8 303 186 1353 209 23 0 chr18 41454282 41454541 -44534393 - AluJo SINE Alu -36 276 12 287 206 14 41 chr18 41456171 41456244 -44532690 + MIR SINE MIR 70 140 -122 2210 103 0 35 chr18 41456258 41456569 -44532365 + AluSg SINE Alu 1 300 -10 460 286 43 48 chr18 41456611 41456821 -44532113 - MER21B LTR ERV1 -144 719 511 2023 171 30 9 chr18 41456981 41457407 -44531527 + LTR23 LTR ERV1 1 435 -2 923 148 7 0 chr18 41459288 41459437 -44529497 + MSTB1 LTR MaLR 283 432 0 220 353 48 24 chr18 41459455 41459622 -44529312 - MIR SINE MIR -26 236 66 573 194 40 0 chr18 41459646 41459770 -44529164 - L1M4 LINE L1 -1326 4820 4692 479 286 124 19 chr18 41460060 41460270 -44528664 + MIR SINE MIR 21 252 -10 341 341 159 33 chr18 41460680 41461190 -44527744 + L2 LINE L2 2189 2633 -639 3502 159 24 0 chr18 41461190 41461811 -44527123 - L1MC1 LINE L1 -16 6317 5682 341 341 159 33 chr18 41461811 41461953 -44526981 + L2 LINE L2 2633 2756 -516 210 71 0 0 chr18 41461953 41461981 -44526953 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 341 341 159 33 chr18 41461981 41462249 -44526685 + L2 LINE L2 2756 3230 -42 228 233 44 0 chr18 41464952 41465042 -44523892 + A-rich Low_complexity Low_complexity 3 96 0 23 0 0 0 chr18 41465706 41465729 -44523205 + AT_rich Low_complexity Low_complexity 1 23 0 2152 106 0 0 chr18 41465784 41466094 -44522840 - AluSq SINE Alu 0 310 1 2105 117 3 0 chr18 41467358 41467656 -44521278 - AluSg SINE Alu -11 299 1 1573 241 107 57 chr18 41467753 41468314 -44520620 + MLT1E LTR MaLR 4 592 -1 192 77 0 0 chr18 41469174 41469200 -44519734 + (CCA)n Simple_repeat Simple_repeat 1 26 0 259 250 0 16 chr18 41470037 41470101 -44518833 + T-rich Low_complexity Low_complexity 2 64 0 24 53 0 0 chr18 41471074 41471112 -44517822 + AT_rich Low_complexity Low_complexity 1 38 0 236 290 97 0 chr18 41471792 41471885 -44517049 + MIR SINE MIR 49 150 -112 466 327 90 9 chr18 41471920 41472143 -44516791 - MIR SINE MIR -1 261 21 347 332 58 21 chr18 41472276 41472466 -44516468 - L3 LINE CR1 -245 1332 1136 285 360 104 12 chr18 41473586 41473750 -44515184 + MIR3 SINE MIR 26 204 -4 280 300 33 22 chr18 41474684 41474774 -44514160 + MIR SINE MIR 1 91 -171 2182 216 35 33 chr18 41475115 41475480 -44513454 - MLT2B1 LTR ERVL 0 520 152 1860 129 30 14 chr18 41475480 41475775 -44513159 - AluY SINE Alu -11 300 1 2182 216 35 33 chr18 41475775 41475928 -44513006 - MLT2B1 LTR ERVL -368 152 1 252 355 101 7 chr18 41476029 41476167 -44512767 - MIR3 SINE MIR -45 163 13 438 341 0 6 chr18 41476348 41476524 -44512410 + (CA)n Simple_repeat Simple_repeat 2 176 0 313 257 74 47 chr18 41478560 41478708 -44510226 - MIR SINE MIR -46 216 65 783 142 8 8 chr18 41480542 41480669 -44508265 + FLAM_C SINE Alu 7 133 -10 199 77 26 26 chr18 41481585 41481624 -44507310 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2388 70 0 0 chr18 41482462 41482760 -44506174 - AluY SINE Alu -13 298 1 319 357 58 0 chr18 41482766 41482937 -44505997 + MIR SINE MIR 46 226 -36 22 56 0 0 chr18 41483378 41483414 -44505520 + AT_rich Low_complexity Low_complexity 1 36 0 2243 104 0 3 chr18 41485128 41485427 -44503507 - AluSc SINE Alu -11 298 1 443 293 86 6 chr18 41485713 41485887 -44503047 + L1MC/D LINE L1 5600 5787 -2021 22 70 0 0 chr18 41491300 41491343 -44497591 + AT_rich Low_complexity Low_complexity 1 43 0 24 0 0 0 chr18 41491508 41491532 -44497402 + AT_rich Low_complexity Low_complexity 1 24 0 1982 121 52 50 chr18 41492258 41492621 -44496313 + THE1B LTR MaLR 1 364 0 24 0 0 0 chr18 41492808 41492832 -44496102 + AT_rich Low_complexity Low_complexity 1 24 0 200 324 59 0 chr18 41493091 41493159 -44495775 - MIR SINE MIR -74 188 117 190 321 85 38 chr18 41494137 41494243 -44494691 - L3b LINE CR1 -6 1577 1467 1392 180 41 95 chr18 41495305 41495336 -44493598 + MLT1B LTR MaLR 1 32 -358 225 0 0 0 chr18 41495336 41495361 -44493573 + (CA)n Simple_repeat Simple_repeat 2 26 0 1392 180 41 95 chr18 41495361 41495372 -44493562 + MLT1B LTR MaLR 32 42 -348 480 35 0 0 chr18 41495372 41495430 -44493504 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 1392 180 41 95 chr18 41495430 41495798 -44493136 + MLT1B LTR MaLR 42 390 0 23 0 0 0 chr18 41495804 41495827 -44493107 + AT_rich Low_complexity Low_complexity 1 23 0 269 179 18 0 chr18 41496527 41496583 -44492351 - LTR16C LTR ERVL 0 491 435 239 293 20 40 chr18 41497177 41497276 -44491658 - L1ME3A LINE L1 -91 6079 5983 283 289 10 29 chr18 41497477 41497581 -44491353 - L1ME3A LINE L1 -403 5767 5666 299 258 39 8 chr18 41497680 41497808 -44491126 - L1ME3A LINE L1 -727 5435 5304 349 275 88 88 chr18 41497855 41498117 -44490817 - L1ME3A LINE L1 -905 5241 4980 258 156 0 0 chr18 41498571 41498616 -44490318 + (CA)n Simple_repeat Simple_repeat 2 46 0 237 108 0 0 chr18 41498939 41498976 -44489958 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 453 19 0 0 chr18 41499668 41499722 -44489212 + (CA)n Simple_repeat Simple_repeat 2 55 0 185 304 0 0 chr18 41500453 41500499 -44488435 + L2 LINE L2 3248 3293 -20 204 40 0 0 chr18 41500507 41500532 -44488402 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 555 291 40 12 chr18 41503089 41503336 -44485598 + L1MB8 LINE L1 5925 6178 0 44 70 0 0 chr18 41503693 41503779 -44485155 + AT_rich Low_complexity Low_complexity 1 86 0 31 44 0 0 chr18 41504240 41504285 -44484649 + AT_rich Low_complexity Low_complexity 1 45 0 411 275 174 0 chr18 41504914 41505063 -44483871 - LTR33 LTR ERVL -253 268 94 184 352 0 0 chr18 41505740 41505794 -44483140 - MIR SINE MIR -18 244 191 213 365 112 13 chr18 41505984 41506217 -44482717 - L2 LINE L2 -347 2967 2712 268 339 83 18 chr18 41506283 41506501 -44482433 + L2 LINE L2 2119 2350 -964 1095 311 170 16 chr18 41508436 41509362 -44479572 - L2 LINE L2 -2 3311 2235 1524 226 81 17 chr18 41509372 41509780 -44479154 + MLT1C LTR MaLR 6 439 -28 976 292 44 32 chr18 41509808 41509896 -44479038 - L2 LINE L2 -1080 2234 2149 2088 126 0 16 chr18 41509896 41510226 -44478708 + AluSx SINE Alu 2 312 0 976 292 44 32 chr18 41510226 41510479 -44478455 - L2 LINE L2 -1165 2149 1889 223 344 31 55 chr18 41511663 41511791 -44477143 + MER5B DNA MER1_type 2 126 -52 242 54 0 27 chr18 41512610 41512647 -44476287 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 561 30 0 0 chr18 41513693 41513760 -44475174 + (CA)n Simple_repeat Simple_repeat 2 68 0 1138 193 46 132 chr18 41514258 41514652 -44474282 - MLT1A2 LTR MaLR -11 363 4 294 229 106 24 chr18 41515517 41515687 -44473247 - L1MEc LINE L1 -3645 2570 2387 370 267 107 57 chr18 41515690 41515952 -44472982 - L1MEc LINE L1 -4002 2394 2120 2214 188 20 11 chr18 41516749 41517190 -44471744 + MER65A LTR ERV1 1 445 0 824 277 86 26 chr18 41517193 41517238 -44471696 + L1MEc LINE L1 2051 2092 -4123 267 31 0 0 chr18 41517238 41517270 -44471664 + (TG)n Simple_repeat Simple_repeat 2 33 0 824 277 86 26 chr18 41517270 41517851 -44471083 + L1MEc LINE L1 2092 2669 -3546 842 278 160 13 chr18 41517887 41518669 -44470265 + L1MEc LINE L1 2816 3712 -2503 4425 149 24 22 chr18 41518680 41519366 -44469568 - L1PA16 LINE L1 0 6166 5476 1556 208 3 0 chr18 41519366 41519659 -44469275 + AluJo SINE Alu 1 294 -18 4425 149 24 22 chr18 41519659 41519758 -44469176 - L1PA16 LINE L1 -690 5476 5379 189 169 31 15 chr18 41519800 41519865 -44469069 + GA-rich Low_complexity Low_complexity 4 69 0 962 255 68 56 chr18 41519866 41520364 -44468570 + L1MEc LINE L1 3753 4256 -1959 347 327 122 24 chr18 41520378 41520583 -44468351 - L1MEc LINE L1 -5354 851 627 2975 111 15 7 chr18 41520817 41521277 -44467657 - L1MA5A LINE L1 -5 6292 5829 30 27 0 0 chr18 41521650 41521687 -44467247 + AT_rich Low_complexity Low_complexity 1 37 0 1253 190 101 19 chr18 41522212 41522528 -44466406 - MER2 DNA MER2_type -2 342 1 22 35 0 0 chr18 41523458 41523487 -44465447 + AT_rich Low_complexity Low_complexity 1 29 0 460 183 75 26 chr18 41525251 41525393 -44463541 - MIR SINE MIR -63 145 21 245 51 26 0 chr18 41525815 41525854 -44463080 + (TG)n Simple_repeat Simple_repeat 2 41 0 860 148 0 7 chr18 41527341 41527476 -44461458 - AluJo SINE Alu -178 134 1 26 0 0 0 chr18 41527529 41527555 -44461379 + AT_rich Low_complexity Low_complexity 1 26 0 2150 128 0 0 chr18 41527589 41527901 -44461033 + AluSx SINE Alu 1 312 0 290 229 16 0 chr18 41528237 41528298 -44460636 + U7 snRNA snRNA 2 63 0 213 39 0 0 chr18 41528312 41528338 -44460596 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 328 348 133 0 chr18 41530301 41530482 -44458452 + MIR SINE MIR 9 213 -49 239 323 61 40 chr18 41530492 41530591 -44458343 - L2 LINE L2 -5 3308 3208 21 95 0 0 chr18 41530634 41530697 -44458237 + AT_rich Low_complexity Low_complexity 1 63 0 409 160 0 21 chr18 41530803 41530897 -44458037 + GA-rich Low_complexity Low_complexity 3 94 0 23 101 0 0 chr18 41531950 41532029 -44456905 + AT_rich Low_complexity Low_complexity 1 79 0 1791 143 18 3 chr18 41532047 41532333 -44456601 - AluJb SINE Alu -18 294 5 70 54 0 0 chr18 41532333 41532445 -44456489 + AT_rich Low_complexity Low_complexity 1 112 0 760 53 0 0 chr18 41533163 41533258 -44455676 - AluY SINE Alu -10 301 207 1844 157 40 27 chr18 41533493 41533863 -44455071 + THE1C LTR MaLR 1 375 0 450 309 105 45 chr18 41534557 41534977 -44453957 + L1ME4a LINE L1 3846 4312 -1834 248 298 53 44 chr18 41535242 41535356 -44453578 + L1ME4a LINE L1 4669 4783 -1363 1011 248 102 7 chr18 41535377 41535672 -44453262 + MER58B DNA MER1_type 4 326 -15 210 131 66 16 chr18 41535693 41535754 -44453180 + (TA)n Simple_repeat Simple_repeat 2 65 0 25 31 0 0 chr18 41536016 41536048 -44452886 + AT_rich Low_complexity Low_complexity 1 32 0 180 0 0 0 chr18 41536200 41536220 -44452714 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 373 321 154 28 chr18 41536220 41536609 -44452325 + L1ME4a LINE L1 5390 5827 -294 21 0 0 0 chr18 41537209 41537230 -44451704 + AT_rich Low_complexity Low_complexity 1 21 0 264 185 0 0 chr18 41537237 41537291 -44451643 + CT-rich Low_complexity Low_complexity 2 55 0 311 319 83 25 chr18 41538758 41538943 -44449991 - L1ME4a LINE L1 -6 6115 5942 1724 153 33 0 chr18 41538943 41539218 -44449716 + AluSq SINE Alu 30 313 0 311 319 83 25 chr18 41539218 41539477 -44449457 - L1ME4a LINE L1 -179 5942 5645 30 45 0 0 chr18 41539845 41539889 -44449045 + AT_rich Low_complexity Low_complexity 1 44 0 1673 170 0 21 chr18 41541471 41541760 -44447174 - AluJo SINE Alu -25 287 5 27 62 0 0 chr18 41542537 41542585 -44446349 + AT_rich Low_complexity Low_complexity 1 48 0 320 381 98 12 chr18 41543785 41544029 -44444905 + L2 LINE L2 2493 2757 -557 190 336 193 8 chr18 41544149 41544268 -44444666 + L2 LINE L2 2909 3049 -264 280 77 39 0 chr18 41544416 41544468 -44444466 + (TA)n Simple_repeat Simple_repeat 1 54 0 351 288 33 93 chr18 41544530 41544745 -44444189 + L2 LINE L2 3112 3313 0 293 281 21 42 chr18 41545150 41545246 -44443688 + MIR SINE MIR 16 109 -153 835 274 14 0 chr18 41545952 41546171 -44442763 - MER58A DNA MER1_type 0 224 3 321 322 167 24 chr18 41547766 41548101 -44440833 + L3 LINE CR1 1121 1503 -74 207 0 0 0 chr18 41548175 41548198 -44440736 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 234 343 0 36 chr18 41548554 41548691 -44440243 + MLT1K LTR MaLR 392 523 -65 35 24 0 0 chr18 41549129 41549171 -44439763 + AT_rich Low_complexity Low_complexity 1 42 0 1638 167 51 11 chr18 41549596 41549933 -44439001 + AluJb SINE Alu 1 348 0 832 137 20 20 chr18 41550042 41550350 -44438584 + GA-rich Low_complexity Low_complexity 1 308 0 337 288 17 46 chr18 41550569 41550740 -44438194 - MIR SINE MIR -56 206 42 249 33 0 0 chr18 41551033 41551063 -44437871 + (TTTTA)n Simple_repeat Simple_repeat 3 32 0 1583 148 29 0 chr18 41551072 41551315 -44437619 - AluSx SINE Alu -24 288 39 379 338 117 26 chr18 41551347 41551699 -44437235 + L2 LINE L2 2468 2851 -463 250 274 0 29 chr18 41552465 41552615 -44436319 + MLT1B LTR MaLR 1 175 -215 522 304 58 26 chr18 41552876 41553067 -44435867 - MIR SINE MIR -60 202 6 2051 242 23 51 chr18 41753187 41754043 -44234891 - L1M4 LINE L1 -2098 4048 3217 22 35 0 0 chr18 41754143 41754172 -44234762 + AT_rich Low_complexity Low_complexity 1 29 0 208 263 40 26 chr18 41754567 41754643 -44234291 - L3 LINE CR1 -440 1137 1061 909 275 5 5 chr18 41756265 41756483 -44232451 - MIR SINE MIR -12 250 33 584 301 30 24 chr18 41756491 41756657 -44232277 - MER5B DNA MER1_type -6 172 6 304 352 64 11 chr18 41756745 41756921 -44232013 - MIR SINE MIR -45 217 34 193 309 0 0 chr18 41756962 41757017 -44231917 - L2 LINE L2 -12 3301 3247 954 89 0 0 chr18 41757411 41757546 -44231388 - AluY SINE Alu -2 309 175 2806 206 63 20 chr18 41757726 41758589 -44230345 + L1MB7 LINE L1 4365 5264 -882 1818 195 5 18 chr18 41758591 41758975 -44229959 + L1MB7 LINE L1 5786 6164 -20 525 293 90 55 chr18 41759722 41760012 -44228922 - MLT1I LTR MaLR 0 409 110 1786 156 31 6 chr18 41760023 41760349 -44228585 + L1PA16 LINE L1 5815 6148 -18 386 316 176 5 chr18 41761398 41761591 -44227343 - MIR SINE MIR -34 228 3 402 329 15 35 chr18 41762876 41763054 -44225880 - MIR SINE MIR -21 187 13 190 293 35 0 chr18 41766285 41766343 -44222591 - L3 LINE CR1 -925 652 593 21 0 0 0 chr18 41766582 41766603 -44222331 + AT_rich Low_complexity Low_complexity 1 21 0 416 294 122 22 chr18 41769390 41769570 -44219364 - MIR SINE MIR 0 262 65 607 308 42 5 chr18 41769963 41770177 -44218757 + MIR SINE MIR 38 259 -3 870 176 0 17 chr18 41770917 41771093 -44217841 - L1MA9 LINE L1 -1 6311 6139 307 338 68 27 chr18 41772855 41773074 -44215860 + MIR SINE MIR 9 236 -26 258 343 9 0 chr18 41773078 41773183 -44215751 + CT-rich Low_complexity Low_complexity 2 107 0 274 56 19 37 chr18 41773433 41773487 -44215447 + (TTG)n Simple_repeat Simple_repeat 2 54 0 22 0 0 0 chr18 41773633 41773655 -44215279 + AT_rich Low_complexity Low_complexity 1 22 0 1762 145 16 41 chr18 41773847 41774165 -44214769 + AluSx SINE Alu 1 310 -2 719 250 23 51 chr18 41774226 41774442 -44214492 + MER63A DNA MER1_type 1 210 0 278 167 0 0 chr18 41774906 41774954 -44213980 + MER63 DNA MER1_type 711 758 -302 232 274 0 0 chr18 41774952 41775003 -44213931 + MER63 DNA MER1_type 983 1033 -27 * 186 43 0 0 chr18 41775325 41775348 -44213586 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 2417 338 98 5 chr18 41775361 41776654 -44212280 - L2 LINE L2 -20 3293 1869 191 338 25 0 chr18 41777579 41777659 -44211275 + MIR3 SINE MIR 105 186 -22 182 294 157 20 chr18 41778018 41778120 -44210814 - L3 LINE CR1 -422 1155 1040 348 325 100 93 chr18 41778249 41778538 -44210396 - L2 LINE L2 -2 3270 2980 600 305 82 96 chr18 41778589 41779362 -44209572 - L2 LINE L2 -339 2975 2214 258 352 80 37 chr18 41779408 41779570 -44209364 + L2 LINE L2 3100 3268 -4 320 308 55 48 chr18 41779735 41779881 -44209053 + MIR3 SINE MIR 21 167 -41 221 328 0 0 chr18 41780729 41780790 -44208144 + MIR3 SINE MIR 141 201 -7 769 17 42 17 chr18 41780979 41781098 -44207836 + (GAAA)n Simple_repeat Simple_repeat 3 124 0 301 254 67 30 chr18 41782294 41782459 -44206475 + Charlie7 DNA MER1_type 2441 2611 -1 268 342 57 25 chr18 41782638 41782796 -44206138 + MIR3 SINE MIR 40 202 -6 21 0 0 0 chr18 41785245 41785266 -44203668 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr18 41785347 41785369 -44203565 + AT_rich Low_complexity Low_complexity 1 22 0 431 189 11 43 chr18 41785376 41785554 -44203380 - L1MA9 LINE L1 -47 6265 5994 288 123 3 0 chr18 41785556 41785608 -44203326 + L1MA9 LINE L1 5933 5985 -306 2625 100 25 25 chr18 41786852 41787413 -44201521 - MER51A LTR ERV1 0 634 1 707 249 194 5 chr18 41788904 41789105 -44199829 + MIR SINE MIR 20 258 -4 261 0 0 0 chr18 41789539 41789568 -44199366 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 21 36 0 0 chr18 41790574 41790602 -44198332 + AT_rich Low_complexity Low_complexity 1 28 0 42989 33 22 1 chr18 41791319 41797104 -44191830 - L1HS LINE L1 -247 5908 1 23 0 0 0 chr18 41798663 41798686 -44190248 + AT_rich Low_complexity Low_complexity 1 23 0 589 310 18 0 chr18 41799462 41799633 -44189301 + MIR SINE MIR 76 249 -13 455 284 124 26 chr18 41800408 41800602 -44188332 + MIR SINE MIR 6 218 -44 763 353 44 30 chr18 41800791 41801227 -44187707 + L2 LINE L2 2517 2958 -356 364 261 170 42 chr18 41801341 41801506 -44187428 + L2 LINE L2 3119 3304 -9 291 265 10 29 chr18 41801519 41801635 -44187299 - L1MC/D LINE L1 -330 5791 5676 265 318 98 28 chr18 41801680 41801894 -44187040 + L2 LINE L2 3084 3312 -1 689 246 15 65 chr18 41802064 41802263 -44186671 + MER63A DNA MER1_type 21 209 -1 772 293 72 36 chr18 41802275 41802606 -44186328 - MLT1J1 LTR MaLR -70 376 34 1701 227 46 26 chr18 41802739 41803197 -44185737 - MLT1C LTR MaLR 0 467 1 295 324 14 62 chr18 41804258 41804403 -44184531 - MIR3 SINE MIR -6 202 65 358 309 154 5 chr18 41805192 41805380 -44183554 - MLT1J LTR MaLR -293 218 3 326 324 28 0 chr18 41805897 41806005 -44182929 + L2 LINE L2 3199 3309 -4 237 279 208 26 chr18 41807068 41807222 -44181712 + L3 LINE CR1 1308 1489 -88 346 351 0 0 chr18 41807993 41808087 -44180847 - L2 LINE L2 -1 3271 3178 181 204 23 23 chr18 41808235 41808279 -44180655 + MIR3 SINE MIR 144 187 -21 335 308 0 17 chr18 41808831 41808948 -44179986 + CT-rich Low_complexity Low_complexity 3 117 0 383 274 20 55 chr18 41809325 41809420 -44179514 - MIR SINE MIR -19 243 152 2119 106 3 0 chr18 41809420 41809731 -44179203 - AluSp SINE Alu 0 312 1 383 274 20 55 chr18 41809731 41809780 -44179154 - MIR SINE MIR -110 152 103 22 0 0 0 chr18 41811023 41811045 -44177889 + AT_rich Low_complexity Low_complexity 1 22 0 524 302 34 20 chr18 41811719 41811948 -44176986 - MIR SINE MIR -14 248 20 441 224 10 0 chr18 41812641 41812739 -44176195 - MIR SINE MIR -13 249 151 631 233 33 7 chr18 41812853 41813003 -44175931 - MIR SINE MIR -107 155 2 2667 226 95 31 chr18 41814351 41815281 -44173653 + Zaphod DNA AcHobo 2 990 -3041 994 198 128 44 chr18 41815286 41815669 -44173265 + Zaphod DNA AcHobo 3603 4017 -14 301 284 161 13 chr18 41815669 41815824 -44173110 + MIR SINE MIR 85 262 0 204 289 19 0 chr18 41815960 41816012 -44172922 - L3 LINE CR1 -148 1429 1377 254 122 0 20 chr18 41817728 41817777 -44171157 + (TC)n Simple_repeat Simple_repeat 1 48 0 342 0 0 0 chr18 41817777 41817815 -44171119 + (TG)n Simple_repeat Simple_repeat 2 39 0 683 233 18 68 chr18 41817954 41818173 -44170761 + MER82 DNA MER2_type 444 651 -2 185 339 15 0 chr18 41818198 41818263 -44170671 + L2 LINE L2 3207 3272 0 622 264 122 15 chr18 41818357 41818554 -44170380 + MIR SINE MIR 17 234 -28 27 49 0 0 chr18 41818632 41818673 -44170261 + AT_rich Low_complexity Low_complexity 1 41 0 2154 140 0 0 chr18 41820420 41820713 -44168221 - AluSx SINE Alu -19 293 1 186 320 115 13 chr18 41821197 41821275 -44167659 + L2 LINE L2 3186 3271 -1 24 53 0 0 chr18 41821619 41821657 -44167277 + AT_rich Low_complexity Low_complexity 1 38 0 203 179 0 0 chr18 41821874 41821913 -44167021 + T-rich Low_complexity Low_complexity 1 39 0 388 200 67 0 chr18 41821913 41822003 -44166931 - L1MA9 LINE L1 -38 6274 6179 270 125 0 0 chr18 41822015 41822063 -44166871 + (T)n Simple_repeat Simple_repeat 1 48 0 2388 14 0 0 chr18 41822065 41822350 -44166584 - L1HS LINE L1 -1 6154 5870 23 0 0 0 chr18 41822469 41822492 -44166442 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr18 41822549 41822573 -44166361 + AT_rich Low_complexity Low_complexity 1 24 0 1935 151 20 8 chr18 41822573 41822924 -44166010 - L1MB1 LINE L1 -1 6167 5813 21 0 0 0 chr18 41822983 41823004 -44165930 + AT_rich Low_complexity Low_complexity 1 21 0 353 301 66 36 chr18 41823397 41823593 -44165341 - MLT1J2 LTR MaLR -9 441 240 258 244 51 13 chr18 41823687 41823765 -44165169 - MLT1J2 LTR MaLR -367 83 3 2091 145 0 0 chr18 41823813 41824123 -44164811 - AluSx SINE Alu -2 310 1 227 116 47 0 chr18 41825010 41825053 -44163881 + GA-rich Low_complexity Low_complexity 1 45 0 471 263 38 12 chr18 41826745 41826905 -44162029 - MIR SINE MIR -50 212 49 232 246 0 16 chr18 41828765 41828826 -44160108 + (TG)n Simple_repeat Simple_repeat 1 60 0 234 206 63 16 chr18 41829819 41829882 -44159052 + MIR SINE MIR 76 141 -67 476 263 83 21 chr18 41831850 41832032 -44156902 - MIR SINE MIR -55 207 16 540 276 8 0 chr18 41832430 41832557 -44156377 - MER5B DNA MER1_type 0 178 51 236 283 0 0 chr18 41832589 41832649 -44156285 + MER5B DNA MER1_type 119 178 0 191 290 16 32 chr18 41832989 41833051 -44155883 - MIR SINE MIR -129 79 19 266 322 12 48 chr18 41833679 41833878 -44155056 + CT-rich Low_complexity Low_complexity 1 191 0 1817 128 8 0 chr18 41834769 41835019 -44153915 + AluSg SINE Alu 34 285 -25 217 250 205 32 chr18 41835066 41835222 -44153712 + MER91A DNA MER1_type 1 183 -13 253 324 102 9 chr18 41836372 41836480 -44152454 - L2 LINE L2 -4 3268 3151 297 75 0 0 chr18 41837696 41837736 -44151198 + (TG)n Simple_repeat Simple_repeat 1 40 0 299 299 39 24 chr18 41837785 41837912 -44151022 - L2 LINE L2 -6 3307 3179 22 0 0 0 chr18 41837947 41837969 -44150965 + AT_rich Low_complexity Low_complexity 1 22 0 203 136 0 45 chr18 41838609 41838653 -44150281 + (TTTTTG)n Simple_repeat Simple_repeat 1 42 0 248 279 0 0 chr18 41838707 41838768 -44150166 + (CAT)n Simple_repeat Simple_repeat 2 62 0 2348 99 3 0 chr18 41840551 41840863 -44148071 + AluSp SINE Alu 1 313 0 215 127 0 55 chr18 41840928 41840983 -44147951 + (TTTTTA)n Simple_repeat Simple_repeat 5 56 0 237 308 55 22 chr18 41841216 41841307 -44147627 - L2 LINE L2 -41 3231 3138 187 281 70 18 chr18 41843467 41843524 -44145410 - L2 LINE L2 -5 3267 3208 274 313 12 44 chr18 41843585 41843745 -44145189 - MLT1J2 LTR MaLR -33 417 263 2352 153 18 40 chr18 41843888 41844332 -44144602 + Tigger2a DNA MER2_type 1 434 0 1704 147 77 0 chr18 41844456 41844729 -44144205 - AluSc SINE Alu -15 294 1 279 335 110 12 chr18 41845378 41845551 -44143383 - L2 LINE L2 -823 2491 2302 412 284 115 41 chr18 41845563 41845806 -44143128 - LTR16A1 LTR ERVL 0 457 197 477 0 0 0 chr18 41847216 41847269 -44141665 + (CA)n Simple_repeat Simple_repeat 2 54 0 193 380 106 0 chr18 41849079 41849192 -44139742 - MIR SINE MIR -67 141 17 26 0 0 0 chr18 41849375 41849401 -44139533 + AT_rich Low_complexity Low_complexity 1 26 0 1294 191 18 11 chr18 41849408 41849690 -44139244 - AluY SINE Alu -27 284 1 1577 219 134 30 chr18 41851098 41851596 -44137338 - MER92C LTR ERV1 -4 550 1 305 285 65 21 chr18 41852239 41852425 -44136509 - L3 LINE CR1 -309 1268 1075 545 235 23 30 chr18 41852828 41852960 -44135974 + MIR SINE MIR 61 191 -71 441 298 122 19 chr18 41853475 41853882 -44135052 - LTR33A LTR ERVL -2 521 3 574 255 146 4 chr18 41854073 41854312 -44134622 - LTR50 LTR ERVL -2 793 521 282 259 71 36 chr18 41854325 41854437 -44134497 - LTR50 LTR ERVL -679 116 1 210 156 0 0 chr18 41854900 41854945 -44133989 + CT-rich Low_complexity Low_complexity 1 45 0 243 0 0 0 chr18 41855197 41855224 -44133710 + (TG)n Simple_repeat Simple_repeat 1 27 0 312 332 186 0 chr18 41856157 41856356 -44132578 - MIR SINE MIR -6 256 21 2362 88 0 25 chr18 41856478 41856796 -44132138 - AluY SINE Alu -1 310 1 323 347 47 38 chr18 41856921 41857134 -44131800 + L3 LINE CR1 1265 1479 -98 186 103 0 0 chr18 41859036 41859065 -44129869 + (TG)n Simple_repeat Simple_repeat 1 29 0 221 375 133 0 chr18 41859269 41859389 -44129545 + L2 LINE L2 3134 3269 -3 308 329 14 0 chr18 41860715 41860855 -44128079 - MER103 DNA DNA -4 162 21 1541 250 31 93 chr18 41861010 41861795 -44127139 + L1MD2 LINE L1 4668 5403 -743 608 256 109 0 chr18 41861778 41861989 -44126945 + L1MD2 LINE L1 5691 5924 -435 * 802 310 58 36 chr18 41862570 41863043 -44125891 + LTR16B LTR ERVL 6 464 0 31 0 0 0 chr18 41864533 41864564 -44124370 + AT_rich Low_complexity Low_complexity 1 31 0 333 267 153 7 chr18 41864568 41864718 -44124216 - MER5B DNA MER1_type 0 178 7 251 268 24 32 chr18 41866685 41866808 -44122126 + CT-rich Low_complexity Low_complexity 1 122 0 259 292 0 0 chr18 41869035 41869100 -44119834 + MER5B DNA MER1_type 2 66 -112 2530 62 0 0 chr18 41869100 41869406 -44119528 + AluY SINE Alu 1 306 -5 1172 185 0 40 chr18 41869432 41869659 -44119275 + AluJb SINE Alu 1 218 -94 1188 219 68 12 chr18 41869756 41870080 -44118854 - L1ME3 LINE L1 -208 5954 5613 590 223 8 39 chr18 41870134 41870264 -44118670 + MER5B DNA MER1_type 47 172 -6 1049 126 93 51 chr18 41870335 41870433 -44118501 - Tigger1 DNA MER2_type -1 2417 2325 1934 144 7 20 chr18 41870433 41870732 -44118202 + AluSq SINE Alu 1 295 -18 1049 126 93 51 chr18 41870732 41870848 -44118086 - Tigger1 DNA MER2_type -93 2325 2194 11108 143 48 12 chr18 41870848 41871724 -44117210 - Tigger1 DNA MER2_type -479 1939 1096 1944 113 29 51 chr18 41871724 41872035 -44116899 - AluSg1 SINE Alu -3 306 3 11108 143 48 12 chr18 41872035 41873029 -44115905 - Tigger1 DNA MER2_type -1322 1096 2 1190 251 71 41 chr18 41873460 41873950 -44114984 - MLT1D LTR MaLR 0 505 1 392 186 24 16 chr18 41874182 41874306 -44114628 + GA-rich Low_complexity Low_complexity 4 128 0 255 75 25 0 chr18 41874420 41874460 -44114474 + MLT1D LTR MaLR 465 505 0 347 89 18 0 chr18 41874595 41874651 -44114283 + (TCCA)n Simple_repeat Simple_repeat 1 57 0 206 119 48 0 chr18 41874814 41874856 -44114078 + CT-rich Low_complexity Low_complexity 1 44 0 328 301 101 30 chr18 41875008 41875207 -44113727 - L1ME3A LINE L1 -276 5894 5682 349 319 51 41 chr18 41875260 41875535 -44113399 - L1ME3A LINE L1 -2260 5548 5268 887 206 34 15 chr18 41875535 41875739 -44113195 - MER3 DNA MER1_type 0 209 2 349 319 51 41 chr18 41875739 41875755 -44113179 - L1ME3A LINE L1 -2540 5268 5254 1649 261 92 16 chr18 41875815 41876328 -44112606 + MLT1H1 LTR MaLR 1 552 -3 309 315 49 35 chr18 41876435 41876638 -44112296 + MIR SINE MIR 37 242 -20 262 219 27 14 chr18 41876910 41876983 -44111951 + L1ME LINE L1 5822 5895 -226 1558 178 33 11 chr18 41877289 41877565 -44111369 + AluJb SINE Alu 10 291 -21 252 258 30 0 chr18 41880597 41880663 -44108271 + MIR SINE MIR 72 139 -69 21 36 0 0 chr18 41880687 41880715 -44108219 + AT_rich Low_complexity Low_complexity 1 28 0 1117 81 0 25 chr18 41881132 41881293 -44107641 + L1P5 LINE L1 5635 5791 -360 265 216 21 41 chr18 41881277 41881374 -44107560 + L1MC4 LINE L1 6609 6703 -1339 * 308 270 22 11 chr18 41881383 41881472 -44107462 - L1MC4 LINE L1 -1339 6703 6614 2776 66 11 0 chr18 41881479 41881843 -44107091 + L1PB1 LINE L1 5782 6149 -2 21 57 0 0 chr18 41882172 41882207 -44106727 + AT_rich Low_complexity Low_complexity 1 35 0 780 243 63 0 chr18 41882888 41883077 -44105857 + MER63A DNA MER1_type 6 206 -4 231 258 182 0 chr18 41883193 41883259 -44105675 + L2 LINE L2 3227 3304 -9 286 129 32 0 chr18 41883854 41883916 -44105018 + (TA)n Simple_repeat Simple_repeat 2 65 0 249 180 0 0 chr18 41884060 41884110 -44104824 + T-rich Low_complexity Low_complexity 1 50 0 195 341 71 32 chr18 41886184 41886310 -44102624 + L3 LINE CR1 39 169 -1408 1716 71 13 4 chr18 41886312 41886550 -44102384 + L1PA6 LINE L1 5913 6152 -2 22 35 0 0 chr18 41886568 41886597 -44102337 + AT_rich Low_complexity Low_complexity 1 29 0 387 335 120 30 chr18 41886686 41886952 -44101982 + L3 LINE CR1 1265 1554 -23 201 143 0 0 chr18 41887369 41887404 -44101530 + (TG)n Simple_repeat Simple_repeat 2 36 0 299 197 158 0 chr18 41888441 41888517 -44100417 - L2 LINE L2 0 3313 3226 304 264 196 43 chr18 41888574 41888737 -44100197 + MIR SINE MIR 49 236 -26 444 0 0 0 chr18 41888764 41888819 -44100115 - L1PA2 LINE L1 -3 6152 6098 200 139 0 23 chr18 41890997 41891040 -44097894 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 1058 177 43 35 chr18 41891062 41891294 -44097640 + MER96B DNA MER1_type? 2 235 -182 305 254 0 0 chr18 41891749 41891816 -44097118 + MIR SINE MIR 87 153 -109 2404 140 50 48 chr18 41891960 41892440 -44096494 - L1MB3 LINE L1 -7 6176 5696 268 280 20 30 chr18 41894363 41894463 -44094471 + MIR SINE MIR 43 141 -67 429 54 0 0 chr18 41894614 41894670 -44094264 + (TG)n Simple_repeat Simple_repeat 2 57 0 202 299 0 0 chr18 41895187 41895254 -44093680 + T-rich Low_complexity Low_complexity 1 67 0 27 62 0 0 chr18 41895281 41895329 -44093605 + AT_rich Low_complexity Low_complexity 1 48 0 592 359 99 26 chr18 41895857 41896281 -44092653 + L2 LINE L2 2818 3272 0 180 0 0 0 chr18 41897930 41897950 -44090984 + (CAA)n Simple_repeat Simple_repeat 2 21 0 547 291 18 6 chr18 41898383 41898548 -44090386 + LTR16A LTR ERVL 181 347 -103 635 163 16 39 chr18 41898791 41898920 -44090014 + MER3 DNA MER1_type 1 126 -83 219 298 0 0 chr18 41899151 41899208 -44089726 - L2 LINE L2 -6 3266 3210 422 165 0 12 chr18 41900511 41900596 -44088338 + CT-rich Low_complexity Low_complexity 4 87 0 815 213 110 0 chr18 41901769 41901933 -44087001 - MER5A DNA MER1_type -2 187 6 267 347 8 32 chr18 41902858 41902982 -44085952 - MIR3 SINE MIR -17 191 71 1397 193 177 31 chr18 41904473 41904857 -44084077 + MLT1D LTR MaLR 66 505 0 381 58 0 0 chr18 41905254 41905306 -44083628 + (CA)n Simple_repeat Simple_repeat 2 53 0 318 333 94 0 chr18 41905345 41905516 -44083418 - MIR SINE MIR -56 206 20 800 262 10 19 chr18 41906375 41906581 -44082353 + MIR SINE MIR 47 250 -12 280 364 38 23 chr18 41907069 41907201 -44081733 + L2 LINE L2 3136 3269 -3 511 189 92 44 chr18 41908573 41908801 -44080133 - L1M4 LINE L1 -3745 2401 2163 255 248 101 40 chr18 41909194 41909343 -44079591 - L1ME LINE L1 -312 5858 5701 928 198 29 81 chr18 41909343 41909687 -44079247 - L1ME2 LINE L1 -37 6196 5871 8221 138 23 13 chr18 41909689 41911113 -44077821 - Tigger1 DNA MER2_type 0 2418 980 234 146 0 36 chr18 41911113 41911168 -44077766 - Tigger1 DNA MER2_type -1672 746 694 637 188 14 0 chr18 41911169 41911313 -44077621 + CT-rich Low_complexity Low_complexity 3 148 0 764 113 34 23 chr18 41911327 41911504 -44077430 + CT-rich Low_complexity Low_complexity 1 179 0 549 188 22 28 chr18 41911520 41911701 -44077233 + CT-rich Low_complexity Low_complexity 1 180 0 1650 171 16 38 chr18 41911701 41911729 -44077205 - AluJb SINE Alu -3 309 282 312 27 0 0 chr18 41911729 41911766 -44077168 + (TTCCC)n Simple_repeat Simple_repeat 3 39 0 1650 171 16 38 chr18 41911766 41912053 -44076881 - AluJb SINE Alu -30 282 1 991 209 58 61 chr18 41912054 41912417 -44076517 - L1ME2 LINE L1 -944 5271 4910 1038 272 76 24 chr18 41912425 41913046 -44075888 - L1ME2 LINE L1 -4117 2279 1627 40681 34 21 2 chr18 41913050 41919077 -44069857 - L1PA2 LINE L1 -4 6151 4 1060 285 61 31 chr18 41919088 41919977 -44068957 - L1ME2 LINE L1 -4776 1620 661 268 343 28 31 chr18 41920333 41920622 -44068312 - L1ME2 LINE L1 -6028 368 81 1836 144 48 3 chr18 41921747 41922038 -44066896 + AluSx SINE Alu 1 304 -8 27 0 0 0 chr18 41922384 41922411 -44066523 + AT_rich Low_complexity Low_complexity 1 27 0 429 259 14 84 chr18 41923566 41923596 -44065338 + L2 LINE L2 3180 3211 -102 1504 229 8 25 chr18 41923596 41923989 -44064945 + MLT1B LTR MaLR 3 388 -2 429 259 14 84 chr18 41923989 41924101 -44064833 + L2 LINE L2 3211 3312 -1 224 100 25 0 chr18 41929485 41929525 -44059409 + (TC)n Simple_repeat Simple_repeat 2 42 0 295 295 29 9 chr18 41930527 41930632 -44058302 + MIR SINE MIR 81 187 -75 185 291 223 0 chr18 41930834 41930937 -44057997 + MIR3 SINE MIR 33 158 -50 187 294 20 0 chr18 41931132 41931183 -44057751 + MIR SINE MIR 211 262 0 21 0 0 0 chr18 41931702 41931723 -44057211 + AT_rich Low_complexity Low_complexity 1 21 0 957 49 0 0 chr18 41932207 41932329 -44056605 + L1PA5 LINE L1 6033 6154 0 1616 218 62 19 chr18 41933783 41934265 -44054669 + MER113 DNA MER1_type? 19 521 0 1991 152 13 3 chr18 41934317 41934620 -44054314 - AluSx SINE Alu -6 306 1 1573 175 79 18 chr18 41935075 41935418 -44053516 + MLT1A1 LTR MaLR 1 364 -1 2251 114 0 0 chr18 41935533 41935831 -44053103 - AluY SINE Alu -13 298 1 453 122 0 0 chr18 41937652 41937726 -44051208 + (TG)n Simple_repeat Simple_repeat 1 74 0 22 0 0 0 chr18 41937816 41937838 -44051096 + AT_rich Low_complexity Low_complexity 1 22 0 181 298 0 0 chr18 41938204 41938251 -44050683 + L2 LINE L2 3267 3313 0 308 327 127 18 chr18 41939632 41939797 -44049137 + MER5A DNA MER1_type 6 188 -1 1307 231 162 18 chr18 41939940 41940378 -44048556 + MLT1D LTR MaLR 5 505 0 279 207 17 0 chr18 41940593 41940651 -44048283 + L2 LINE L2 3255 3313 0 234 296 250 17 chr18 41940719 41940891 -44048043 + MIR SINE MIR 3 214 -48 1013 319 143 80 chr18 41940928 41941999 -44046935 - L2 LINE L2 -239 3074 2072 1414 191 3 91 chr18 41941999 41942329 -44046605 + AluJo SINE Alu 1 301 -11 1013 319 143 80 chr18 41942329 41942467 -44046467 - L2 LINE L2 -1241 2072 1944 2847 19 0 0 chr18 41942467 41942785 -44046149 - AluYb8 SINE Alu 0 318 1 1013 319 143 80 chr18 41942785 41943147 -44045787 - L2 LINE L2 -1369 1944 1395 201 241 0 0 chr18 41943184 41943238 -44045696 + CT-rich Low_complexity Low_complexity 1 54 0 1314 171 28 32 chr18 41943239 41943491 -44045443 - AluJo SINE Alu -23 289 39 183 382 107 24 chr18 41943529 41943948 -44044986 - L2 LINE L2 -2048 1266 813 2571 121 11 3 chr18 41944000 41944372 -44044562 + THE1C LTR MaLR 1 375 0 581 60 36 0 chr18 41945364 41945448 -44043486 + (TTTTC)n Simple_repeat Simple_repeat 3 89 0 251 163 20 0 chr18 41945458 41945507 -44043427 + CT-rich Low_complexity Low_complexity 4 53 0 1651 172 14 25 chr18 41946368 41946653 -44042281 - AluJo SINE Alu -30 282 1 520 273 66 81 chr18 41946864 41947198 -44041736 - MER102b DNA MER1_type -12 329 1 24 53 0 0 chr18 41947242 41947280 -44041654 + AT_rich Low_complexity Low_complexity 1 38 0 206 323 0 16 chr18 41947729 41947791 -44041143 - MER5A DNA MER1_type -94 95 35 * 235 259 12 62 chr18 41947736 41947817 -44041117 + MER5A DNA MER1_type 113 189 0 336 48 0 0 chr18 41947958 41948000 -44040934 + (TG)n Simple_repeat Simple_repeat 1 42 0 189 0 0 0 chr18 41948061 41948082 -44040852 + (TA)n Simple_repeat Simple_repeat 2 22 0 202 324 0 28 chr18 41948330 41948401 -44040533 + L2 LINE L2 3201 3269 -3 197 348 43 14 chr18 41948567 41948636 -44040298 - MIR SINE MIR -118 90 20 675 279 62 9 chr18 41948644 41948870 -44040064 + MIR SINE MIR 15 252 -10 1909 141 3 3 chr18 41949135 41949440 -44039494 + AluSq SINE Alu 1 305 0 180 367 95 19 chr18 41949762 41949972 -44038962 + L2 LINE L2 2752 2977 -337 195 389 0 56 chr18 41950111 41950219 -44038715 + L2 LINE L2 3122 3223 -49 1927 144 0 21 chr18 41950229 41950550 -44038384 - AluSx SINE Alu 0 315 1 1970 117 46 0 chr18 41951705 41951987 -44036947 - AluSx SINE Alu -17 295 1 2643 152 24 12 chr18 41952196 41952704 -44036230 + L1MB7 LINE L1 5663 6176 -8 692 305 90 41 chr18 41952780 41953342 -44035592 - L2 LINE L2 -213 3100 2509 912 272 87 17 chr18 41953391 41953861 -44035073 + L1ME3A LINE L1 5666 6168 -2 227 343 58 64 chr18 41954194 41954366 -44034568 - L2 LINE L2 -1 3271 3101 185 215 89 63 chr18 41954498 41954577 -44034357 - MIR SINE MIR -106 156 76 1595 167 0 37 chr18 41956199 41956468 -44032466 - AluJo SINE Alu -53 259 1 200 294 0 0 chr18 41956472 41956523 -44032411 - MER5A DNA MER1_type -138 51 1 22 35 0 0 chr18 41956742 41956771 -44032163 + AT_rich Low_complexity Low_complexity 1 29 0 634 311 11 45 chr18 41957747 41958011 -44030923 + MIR SINE MIR 3 257 -5 2115 126 3 16 chr18 41958568 41958877 -44030057 - AluSx SINE Alu -7 305 1 390 21 0 0 chr18 41959265 41959312 -44029622 + (CA)n Simple_repeat Simple_repeat 2 48 0 235 257 93 43 chr18 41961171 41961311 -44027623 + L3b LINE CR1 1247 1393 -190 231 88 0 0 chr18 41963136 41963170 -44025764 + (A)n Simple_repeat Simple_repeat 1 34 0 250 200 143 14 chr18 41963522 41963592 -44025342 - MIR SINE MIR -74 188 110 432 305 91 68 chr18 41965052 41965446 -44023488 + MLT1K LTR MaLR 128 530 -58 181 269 39 39 chr18 41967138 41967216 -44021718 - L3 LINE CR1 -895 682 605 2035 148 0 0 chr18 41967289 41967579 -44021355 - AluSx SINE Alu -22 290 1 1225 175 45 68 chr18 41967824 41968104 -44020830 + L1MB8 LINE L1 5869 6139 -205 1926 170 0 80 chr18 41968104 41968348 -44020586 - MLT1B LTR MaLR 0 390 193 2223 110 0 7 chr18 41968348 41968657 -44020277 - AluSc SINE Alu -1 308 2 1926 170 0 80 chr18 41968657 41968836 -44020098 - MLT1B LTR MaLR -197 193 1 1225 175 45 68 chr18 41968836 41969038 -44019896 + L1MB8 LINE L1 6139 6344 0 267 141 14 28 chr18 41969049 41969120 -44019814 + GA-rich Low_complexity Low_complexity 3 72 0 240 222 19 0 chr18 41969140 41969194 -44019740 + A-rich Low_complexity Low_complexity 4 58 0 699 295 58 0 chr18 41969198 41969405 -44019529 + MIR SINE MIR 23 241 -21 192 238 0 0 chr18 41969589 41969631 -44019303 - L2 LINE L2 0 3313 3272 21 0 0 0 chr18 41969838 41969859 -44019075 + AT_rich Low_complexity Low_complexity 1 21 0 564 240 5 109 chr18 41971793 41971985 -44016949 + MER77 LTR ERV1 115 286 -319 23 33 0 0 chr18 41972234 41972264 -44016670 + AT_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr18 41972449 41972474 -44016460 + AT_rich Low_complexity Low_complexity 1 25 0 261 83 0 0 chr18 41973201 41973237 -44015697 + (TATG)n Simple_repeat Simple_repeat 4 39 0 1107 84 0 0 chr18 41973238 41973416 -44015518 + (TA)n Simple_repeat Simple_repeat 1 178 0 335 248 20 40 chr18 41973429 41973530 -44015404 - L1MC4 LINE L1 -1339 6703 6605 1229 181 0 37 chr18 41975474 41975717 -44013217 - MER46A DNA MER2_type -2 234 1 894 139 0 0 chr18 41976442 41976579 -44012355 + AluSp/q SINE Alu 159 295 -18 254 317 73 33 chr18 41976866 41977035 -44011899 + MER5B DNA MER1_type 2 178 -11 204 97 0 0 chr18 41977398 41977429 -44011505 + (TC)n Simple_repeat Simple_repeat 2 32 0 231 289 24 0 chr18 41977622 41977705 -44011229 - L1MC4 LINE L1 -1343 6699 6615 462 211 0 0 chr18 41977706 41977810 -44011124 + (TATG)n Simple_repeat Simple_repeat 4 107 0 270 152 152 0 chr18 41977811 41977890 -44011044 + L1MC4 LINE L1 6615 6705 -1337 186 189 0 0 chr18 41977894 41977931 -44011003 + (TA)n Simple_repeat Simple_repeat 1 37 0 278 224 71 0 chr18 41977945 41978030 -44010904 + L1MC4 LINE L1 6613 6703 -1339 216 194 48 16 chr18 41978231 41978293 -44010641 + (CATATA)n Simple_repeat Simple_repeat 5 68 0 403 288 89 53 chr18 41978295 41979025 -44009909 - L1MEd LINE L1 -4547 1763 969 310 174 69 160 chr18 41979055 41979199 -44009735 + MER20B DNA MER1_type 650 780 -3 213 39 0 0 chr18 41979839 41979865 -44009069 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 222 91 0 0 chr18 41979864 41979897 -44009037 + (CA)n Simple_repeat Simple_repeat 1 33 0 218 300 0 29 chr18 41980797 41980867 -44008067 - L2 LINE L2 0 3272 3205 189 230 189 0 chr18 41981143 41981217 -44007717 - L2 LINE L2 -115 3198 3111 191 333 17 17 chr18 41981508 41981568 -44007366 - L2 LINE L2 -243 3070 3011 739 343 91 44 chr18 41981642 41982315 -44006619 - L2 LINE L2 -444 2870 2147 1845 170 0 7 chr18 41982315 41982615 -44006319 + AluJb SINE Alu 6 303 -9 739 343 91 44 chr18 41982615 41982789 -44006145 - L2 LINE L2 -1167 2147 1983 690 197 21 21 chr18 41982891 41983033 -44005901 + AluJo SINE Alu 38 179 -133 895 295 142 28 chr18 41983252 41983689 -44005245 + LTR33 LTR ERVL 10 496 -25 29 0 0 0 chr18 41984057 41984086 -44004848 + AT_rich Low_complexity Low_complexity 1 29 0 1498 253 63 28 chr18 41984161 41984749 -44004185 + MER21B LTR ERV1 127 787 -76 237 65 0 0 chr18 41985844 41985875 -44003059 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2253 120 13 47 chr18 41989165 41989547 -43999387 - THE1C LTR MaLR 0 375 7 634 300 131 44 chr18 41989586 41990158 -43998776 - L2 LINE L2 -5 3308 2690 330 286 45 18 chr18 41990727 41990839 -43998095 + MIR SINE MIR 33 147 -61 184 283 0 0 chr18 41990843 41990889 -43998045 + L2 LINE L2 3255 3300 -13 285 216 0 14 chr18 41991221 41991295 -43997639 + (TA)n Simple_repeat Simple_repeat 2 74 0 229 298 132 25 chr18 41991309 41991487 -43997447 + MIR SINE MIR 37 243 -19 509 308 6 33 chr18 41992018 41992200 -43996734 + MIR SINE MIR 21 197 -65 281 330 76 32 chr18 41992957 41993142 -43995792 - MIR SINE MIR -57 205 13 275 105 0 0 chr18 41993359 41993397 -43995537 - MADE1 DNA Mariner -41 39 2 203 161 0 0 chr18 41994601 41994632 -43994302 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 405 283 13 94 chr18 41994634 41994793 -43994141 - L2 LINE L2 -5 3267 3122 212 384 49 27 chr18 41994966 41995190 -43993744 - L2 LINE L2 -407 2907 2679 344 234 162 18 chr18 41995381 41995492 -43993442 + MIR3 SINE MIR 79 205 -3 331 325 43 0 chr18 41995656 41995773 -43993161 - MIR SINE MIR -82 180 59 21 0 0 0 chr18 41997105 41997126 -43991808 + AT_rich Low_complexity Low_complexity 1 21 0 199 54 54 0 chr18 41998192 41998229 -43990705 + A-rich Low_complexity Low_complexity 2 40 0 26 88 0 0 chr18 41998921 41998989 -43989945 + AT_rich Low_complexity Low_complexity 1 68 0 1798 136 11 14 chr18 41999444 41999761 -43989173 - AluSc SINE Alu 0 316 1 25 0 0 0 chr18 42000005 42000030 -43988904 + AT_rich Low_complexity Low_complexity 1 25 0 1038 185 76 17 chr18 42000641 42000943 -43987991 + MER33 DNA MER1_type 1 320 -4 287 330 55 9 chr18 42001394 42001503 -43987431 + MIR SINE MIR 31 144 -118 311 267 233 24 chr18 42002954 42003160 -43985774 + MIR SINE MIR 8 256 -6 1363 186 4 16 chr18 42004937 42005189 -43983745 + AluJo SINE Alu 34 282 -30 668 285 137 67 chr18 42005257 42006302 -43982632 - HAL1 LINE L1 -91 2416 1299 2145 232 71 75 chr18 42006784 42007993 -43980941 + L1MC5 LINE L1 6698 7901 -60 1675 189 7 3 chr18 42008005 42008311 -43980623 - AluJo SINE Alu -3 309 3 689 279 92 94 chr18 42008325 42008963 -43979971 - HAL1 LINE L1 -1471 1036 400 184 235 73 59 chr18 42008981 42009049 -43979885 - MIR3 SINE MIR -3 205 137 374 337 9 61 chr18 42009777 42009989 -43978945 - MIR SINE MIR -43 219 20 201 175 0 0 chr18 42012218 42012258 -43976676 + (TG)n Simple_repeat Simple_repeat 2 41 0 215 163 0 20 chr18 42013649 42013698 -43975236 + T-rich Low_complexity Low_complexity 3 50 0 3629 60 2 4 chr18 42013813 42014282 -43974652 + L1PA7 LINE L1 5684 6151 -3 367 377 24 18 chr18 42015009 42015176 -43973758 + MIR3 SINE MIR 13 180 -28 392 341 109 14 chr18 42016981 42017201 -43971733 + MIR SINE MIR 13 253 -9 921 314 79 8 chr18 42018117 42018483 -43970451 - MLT1I LTR MaLR -15 394 3 539 278 44 29 chr18 42018742 42018947 -43969987 - MLT1L LTR MaLR -46 569 362 1958 98 4 0 chr18 42019147 42019401 -43969533 + AluSp SINE Alu 39 293 -20 2240 198 29 2 chr18 42019705 42020160 -43968774 - MLT1C LTR MaLR 0 467 1 194 265 20 0 chr18 42020767 42020816 -43968118 - L2 LINE L2 -964 2350 2301 680 263 96 15 chr18 42020921 42021119 -43967815 - MIR SINE MIR 0 262 49 774 278 116 50 chr18 42021949 42022451 -43966483 - MER115 DNA AcHobo 0 4031 154 4557 135 7 8 chr18 42022896 42023639 -43965295 + L1PA16 LINE L1 5416 6157 -9 188 317 61 0 chr18 42023748 42023830 -43965104 + MIR SINE MIR 58 144 -118 853 205 24 67 chr18 42025362 42025572 -43963362 - MER63A DNA MER1_type -3 207 7 897 185 0 19 chr18 42026453 42026610 -43962324 - FRAM SINE Alu -23 153 1 207 274 81 32 chr18 42026634 42026696 -43962238 + MIR SINE MIR 25 89 -119 348 24 0 0 chr18 42028149 42028190 -43960744 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1554 145 118 4 chr18 42028194 42028449 -43960485 - AluSx SINE Alu -28 284 1 333 0 0 0 chr18 42028933 42028970 -43959964 + (CA)n Simple_repeat Simple_repeat 2 38 0 506 338 90 16 chr18 42033066 42033445 -43955489 - HsTC2 DNA Tc2 -1007 891 485 1160 254 99 35 chr18 42034173 42034578 -43954356 - MLT2F LTR ERVL -232 431 1 218 263 18 18 chr18 42034708 42034765 -43954169 - L2 LINE L2 -1 3312 3256 25 0 0 0 chr18 42034769 42034794 -43954140 + AT_rich Low_complexity Low_complexity 1 25 0 406 386 9 9 chr18 42034860 42035075 -43953859 - MIR SINE MIR -38 224 10 227 340 19 57 chr18 42035097 42035203 -43953731 + L2 LINE L2 3125 3226 -46 186 175 53 53 chr18 42035286 42035343 -43953591 - L2 LINE L2 -14 3299 3243 476 268 56 0 chr18 42035364 42035506 -43953428 + MER103 DNA DNA 10 159 -7 246 62 0 0 chr18 42036330 42036362 -43952572 + (TG)n Simple_repeat Simple_repeat 1 32 0 388 273 91 0 chr18 42036578 42036688 -43952246 - MIR SINE MIR -94 168 49 523 282 15 15 chr18 42037526 42037657 -43951277 + MARNA DNA Mariner 63 193 -393 4520 239 61 38 chr18 42038528 42040839 -43948095 - L1ME1 LINE L1 -15 6220 3857 218 105 26 0 chr18 42040844 42040882 -43948052 + (TG)n Simple_repeat Simple_repeat 2 40 0 298 216 9 54 chr18 42040900 42041011 -43947923 + (TA)n Simple_repeat Simple_repeat 1 106 0 423 0 0 0 chr18 42041161 42041208 -43947726 + (TG)n Simple_repeat Simple_repeat 2 48 0 2852 257 57 30 chr18 42041379 42043008 -43945926 - L1ME1 LINE L1 -2947 3268 1639 436 281 161 26 chr18 42043148 42043340 -43945594 + HAL1 LINE L1 1416 1633 -874 626 274 51 11 chr18 42043340 42043515 -43945419 - MER58A DNA MER1_type 0 224 43 2103 269 47 46 chr18 42043548 42044421 -43944513 + HAL1 LINE L1 1624 2497 -10 331 311 139 14 chr18 42044608 42044817 -43944117 - MIR SINE MIR -1 261 27 205 289 31 21 chr18 42045229 42045326 -43943608 + (CAGAGA)n Simple_repeat Simple_repeat 4 101 0 2087 175 70 10 chr18 42046741 42047141 -43941793 + MSTB LTR MaLR 1 424 -2 303 308 210 14 chr18 42048640 42048783 -43940151 - MER91A DNA MER1_type -25 171 1 180 0 0 0 chr18 42049694 42049714 -43939220 + (TG)n Simple_repeat Simple_repeat 2 21 0 344 240 21 31 chr18 42049714 42049810 -43939124 - MIR3 SINE MIR -31 177 83 370 356 27 32 chr18 42051361 42051580 -43937354 + MIR SINE MIR 2 219 -43 2836 183 43 67 chr18 42052328 42052636 -43936298 + L1MC2 LINE L1 5644 5958 -386 2137 107 40 3 chr18 42052636 42052935 -43935999 + AluSx SINE Alu 1 310 -2 2836 183 43 67 chr18 42052935 42053328 -43935606 + L1MC2 LINE L1 5958 6330 -14 827 218 6 0 chr18 42053328 42053498 -43935436 - FAM SINE Alu -2 173 3 2836 183 43 67 chr18 42053498 42053512 -43935422 + L1MC2 LINE L1 6330 6343 -1 2000 110 9 58 chr18 42054293 42054619 -43934315 + AluSx SINE Alu 1 310 -2 414 102 23 34 chr18 42054624 42054712 -43934222 + (GAAAA)n Simple_repeat Simple_repeat 4 90 0 365 218 115 0 chr18 42054823 42054910 -43934024 + L2 LINE L2 3217 3313 0 195 42 0 0 chr18 42056036 42056060 -43932874 + (GA)n Simple_repeat Simple_repeat 1 24 0 234 337 123 25 chr18 42056161 42056324 -43932610 + MIR SINE MIR 29 207 -55 205 379 44 60 chr18 42056605 42056903 -43932031 - L2 LINE L2 -355 2959 2667 313 307 73 29 chr18 42058473 42058610 -43930324 - L2 LINE L2 0 3313 3171 2322 306 121 27 chr18 42058637 42058884 -43930050 - L2 LINE L2 -826 2488 2266 2368 81 3 0 chr18 42058884 42059179 -43929755 - AluY SINE Alu -15 296 1 2322 306 121 27 chr18 42059179 42059245 -43929689 - L2 LINE L2 -1048 2266 2208 279 54 0 0 chr18 42059245 42059282 -43929652 + (CAAGA)n Simple_repeat Simple_repeat 4 40 0 2322 306 121 27 chr18 42059282 42060545 -43928389 - L2 LINE L2 -1106 2208 762 21 82 0 0 chr18 42061108 42061157 -43927777 + AT_rich Low_complexity Low_complexity 1 49 0 27 29 0 0 chr18 42061457 42061491 -43927443 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr18 42062432 42062453 -43926481 + AT_rich Low_complexity Low_complexity 1 21 0 4014 81 9 5 chr18 42062659 42063213 -43925721 + L1PA8 LINE L1 5615 6170 -2 341 260 186 34 chr18 42063444 42063648 -43925286 + MIR SINE MIR 28 262 0 2157 103 0 0 chr18 42065191 42065515 -43923419 + AluSq SINE Alu 1 324 0 541 270 122 26 chr18 42065536 42065766 -43923168 + MIR SINE MIR 11 262 0 591 250 8 0 chr18 42065886 42066014 -43922920 - MER94 DNA DNA 0 134 6 287 248 30 30 chr18 42068828 42068929 -43920005 - MIR SINE MIR -51 211 111 582 210 93 37 chr18 42069180 42069342 -43919592 + MER5B DNA MER1_type 3 173 -5 497 345 153 39 chr18 42070523 42071267 -43917667 + L2 LINE L2 999 1827 -1487 1785 185 37 58 chr18 42071280 42071744 -43917190 - L1MB1 LINE L1 -1 6167 5714 180 292 179 58 chr18 42071748 42072060 -43916874 + L2 LINE L2 1830 2179 -1135 593 147 9 0 chr18 42072109 42072218 -43916716 + CT-rich Low_complexity Low_complexity 3 112 0 2302 117 0 0 chr18 42072227 42072536 -43916398 - AluSq SINE Alu 0 313 5 382 304 70 6 chr18 42072684 42072842 -43916092 - L1M4 LINE L1 -1958 4188 4021 367 254 115 80 chr18 42072845 42073132 -43915802 + MLT1J LTR MaLR 2 298 -213 1657 242 31 39 chr18 42073319 42073828 -43915106 + MLT1D LTR MaLR 1 505 0 459 254 107 100 chr18 42073870 42074338 -43914596 - L1M4 LINE L1 -2188 3958 3488 2390 75 0 13 chr18 42074444 42074751 -43914183 - AluY SINE Alu -8 303 1 21 36 0 0 chr18 42074970 42074998 -43913936 + AT_rich Low_complexity Low_complexity 1 28 0 412 243 21 21 chr18 42075078 42075218 -43913716 - L1M4 LINE L1 -3132 3014 2875 377 316 83 37 chr18 42075257 42075583 -43913351 - L1 LINE L1 -1162 4984 4644 414 318 117 13 chr18 42075596 42076396 -43912538 - L1 LINE L1 -1558 4588 3663 22 56 0 0 chr18 42076586 42076622 -43912312 + AT_rich Low_complexity Low_complexity 1 36 0 1430 235 34 75 chr18 42076961 42077497 -43911437 - L1ME1 LINE L1 -4 6162 5649 423 362 106 32 chr18 42077926 42078537 -43910397 + L2 LINE L2 2405 3063 -209 29 28 0 0 chr18 42079422 42079458 -43909476 + AT_rich Low_complexity Low_complexity 1 36 0 608 271 35 6 chr18 42079587 42079757 -43909177 - MIR SINE MIR -2 260 86 296 368 62 29 chr18 42080820 42081029 -43907905 + MIR SINE MIR 10 225 -37 195 297 117 28 chr18 42081442 42081587 -43907347 - L2 LINE L2 -1119 2195 2038 185 234 227 8 chr18 42081928 42082056 -43906878 + MIR SINE MIR 81 236 -26 2392 74 0 13 chr18 42082235 42082545 -43906389 + AluY SINE Alu 1 306 -5 367 316 69 17 chr18 42082880 42083054 -43905880 - MIR3 SINE MIR -5 203 21 188 152 0 30 chr18 42084008 42084041 -43904893 - L3 LINE CR1 -469 1108 1077 180 0 0 0 chr18 42084452 42084472 -43904462 + (CAAAAA)n Simple_repeat Simple_repeat 2 21 0 318 281 10 21 chr18 42085315 42085411 -43903523 - MIR3 SINE MIR -108 100 6 472 248 0 32 chr18 42085673 42085701 -43903233 - MIR SINE MIR -93 169 142 1374 261 20 3 chr18 42085701 42086058 -43902876 + MLT1A1 LTR MaLR 3 365 0 472 248 0 32 chr18 42086058 42086154 -43902780 - MIR SINE MIR -120 142 49 1089 233 109 45 chr18 42086330 42086799 -43902135 + MER110A LTR ERV1 1 480 -11 1610 116 4 9 chr18 42088112 42088344 -43900590 - AluSq SINE Alu 0 313 83 279 374 82 35 chr18 42088497 42088863 -43900071 + L2 LINE L2 2587 2969 -345 239 325 60 8 chr18 42089071 42089188 -43899746 + L2 LINE L2 3177 3299 -14 327 308 156 14 chr18 42089496 42089707 -43899227 + MIR SINE MIR 12 252 -10 3081 226 41 16 chr18 42090141 42091095 -43897839 - L1ME1 LINE L1 -92 6074 5101 272 331 75 8 chr18 42093835 42093968 -43894966 - MIR SINE MIR -19 243 102 387 315 51 11 chr18 42095098 42095276 -43893658 - MER20 DNA MER1_type 0 219 35 742 207 31 0 chr18 42095926 42096119 -43892815 - L1MB3 LINE L1 -1 6182 5984 6212 230 71 23 chr18 42096120 42097639 -43891295 - L1MB3 LINE L1 -404 5779 4091 333 0 0 0 chr18 42097639 42097676 -43891258 + (TG)n Simple_repeat Simple_repeat 1 37 0 6212 230 71 23 chr18 42097676 42098561 -43890373 - L1MB3 LINE L1 -2092 4091 3250 2078 125 0 0 chr18 42098561 42098871 -43890063 - AluY SINE Alu 0 314 5 491 239 22 23 chr18 42099008 42099260 -43889674 - L1MB3 LINE L1 -2883 3263 3014 190 227 0 0 chr18 42099411 42099455 -43889479 - L2 LINE L2 -1 3312 3269 285 231 35 77 chr18 42099491 42099634 -43889300 + MLT2E LTR ERVL 492 628 0 1922 199 72 0 chr18 42099701 42100104 -43888830 - MSTB1 LTR MaLR 0 432 1 683 333 18 5 chr18 42101057 42101279 -43887655 + MIR SINE MIR 37 261 -1 2164 160 3 32 chr18 42101491 42101866 -43887068 + THE1B LTR MaLR 1 364 0 1367 208 27 44 chr18 42101881 42102179 -43886755 - AluJb SINE Alu -9 293 1 21 0 0 0 chr18 42102943 42102964 -43885970 + AT_rich Low_complexity Low_complexity 1 21 0 3262 191 47 10 chr18 42104197 42104907 -43884027 - L1MB4 LINE L1 -2 6178 5443 1891 151 7 0 chr18 42105884 42106163 -43882771 + AluSx SINE Alu 1 282 -26 271 56 0 0 chr18 42106163 42106199 -43882735 + (CAA)n Simple_repeat Simple_repeat 1 180 0 31 26 0 0 chr18 42107369 42107407 -43881527 + AT_rich Low_complexity Low_complexity 1 38 0 312 338 84 29 chr18 42107611 42107922 -43881012 - L1MC/D LINE L1 -2072 5736 5409 262 383 49 6 chr18 42107924 42108229 -43880705 + L2 LINE L2 2859 3181 -132 586 120 8 8 chr18 42109003 42109120 -43879814 + (GGAA)n Simple_repeat Simple_repeat 2 118 0 221 290 0 65 chr18 42109560 42109746 -43879188 + A-rich Low_complexity Low_complexity 1 174 0 25 31 0 0 chr18 42109779 42109811 -43879123 + AT_rich Low_complexity Low_complexity 1 32 0 5802 192 7 63 chr18 42110240 42111235 -43877699 + L1PA15 LINE L1 4149 5037 -1128 3339 99 2 7 chr18 42111235 42111690 -43877244 + MLT2A2 LTR ERVL 1 453 0 5802 192 7 63 chr18 42111690 42112745 -43876189 + L1PA15 LINE L1 5037 6149 -16 602 292 120 51 chr18 42112783 42113393 -43875541 + L1M4 LINE L1 4138 4789 -1357 210 333 170 15 chr18 42113402 42113537 -43875397 + L2 LINE L2 2584 2739 -575 6039 154 39 37 chr18 42113547 42114228 -43874706 - Tigger3b DNA MER2_type -1797 1231 544 1602 191 19 32 chr18 42114228 42114537 -43874397 + AluJo SINE Alu 1 305 -7 6039 154 39 37 chr18 42114537 42115083 -43873851 - Tigger3b DNA MER2_type -2484 544 1 270 295 115 65 chr18 42115148 42115365 -43873569 + L2 LINE L2 2854 3081 -191 2348 122 8 19 chr18 42115579 42115947 -43872987 - THE1B LTR MaLR 0 364 1 385 194 0 14 chr18 42116177 42116249 -43872685 + MER92B LTR ERV1 9 79 -557 1204 178 11 71 chr18 42116424 42116705 -43872229 - AluJo SINE Alu -44 268 5 272 232 98 0 chr18 42117183 42117265 -43871669 + L1ME LINE L1 5779 5868 -253 34 55 0 0 chr18 42117340 42117395 -43871539 + AT_rich Low_complexity Low_complexity 1 55 0 473 280 43 38 chr18 42117961 42118307 -43870627 + L1M4 LINE L1 4968 5315 -831 1306 136 59 140 chr18 42118389 42118753 -43870181 + THE1C LTR MaLR 1 330 -45 2061 127 3 10 chr18 42118753 42119052 -43869882 - AluSx SINE Alu -14 298 2 1306 136 59 140 chr18 42119052 42119093 -43869841 + THE1C LTR MaLR 330 373 -2 1273 177 24 54 chr18 42119264 42119598 -43869336 - MER33 DNA MER1_type 0 324 1 351 0 0 0 chr18 42120429 42120468 -43868466 + (TG)n Simple_repeat Simple_repeat 2 40 0 207 250 0 19 chr18 42120676 42120728 -43868206 + CT-rich Low_complexity Low_complexity 2 52 0 31 0 0 0 chr18 42122220 42122251 -43866683 + AT_rich Low_complexity Low_complexity 1 31 0 321 325 30 42 chr18 42122448 42122614 -43866320 + MIR3 SINE MIR 39 202 -6 396 229 23 19 chr18 42122623 42122748 -43866186 - MIR SINE MIR -63 145 43 2592 188 17 4 chr18 42123158 42123627 -43865307 + MER66B LTR ERV1 10 484 -2 21 0 0 0 chr18 42124368 42124389 -43864545 + AT_rich Low_complexity Low_complexity 1 21 0 333 68 0 0 chr18 42124432 42124476 -43864458 + (TTCCC)n Simple_repeat Simple_repeat 5 48 0 2276 66 0 75 chr18 42175255 42175590 -43813344 + AluY SINE Alu 1 310 -1 251 274 72 105 chr18 42175696 42175849 -43813085 + MIR3 SINE MIR 3 141 -67 4268 171 30 7 chr18 42176660 42177425 -43811509 - L1P LINE L1 -963 5183 4396 225 0 0 0 chr18 42177425 42177450 -43811484 + (TG)n Simple_repeat Simple_repeat 2 26 0 4268 171 30 7 chr18 42177450 42177514 -43811420 - L1P LINE L1 -1750 4396 4335 6037 105 35 2 chr18 42177516 42178499 -43810435 + L1PA13 LINE L1 5152 6163 0 1041 110 0 0 chr18 42179221 42179367 -43809567 - AluSp/q SINE Alu 0 313 168 185 245 9 94 chr18 42179406 42179512 -43809422 - L2 LINE L2 -2962 352 256 2556 65 0 0 chr18 42183746 42184056 -43804878 + AluY SINE Alu 1 310 -1 202 284 148 43 chr18 42184437 42184584 -43804350 + MIR SINE MIR 44 204 -58 458 250 81 31 chr18 42185668 42185828 -43803106 + MIR SINE MIR 18 185 -77 216 111 0 0 chr18 42186236 42186272 -43802662 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 344 203 0 0 chr18 42186975 42187034 -43801900 - L2 LINE L2 -6 3307 3249 227 299 6 38 chr18 42187035 42187057 -43801877 - L1MA10 LINE L1 0 6334 6313 4235 251 82 29 chr18 42187057 42188772 -43800162 - L1ME2 LINE L1 -9 6224 4337 1742 105 94 40 chr18 42188772 42189048 -43799886 - AluSx SINE Alu -21 291 1 4235 251 82 29 chr18 42189048 42189799 -43799135 - L1ME2 LINE L1 -1896 4337 3627 229 211 0 0 chr18 42189841 42189893 -43799041 + (TA)n Simple_repeat Simple_repeat 1 52 0 616 302 79 55 chr18 42189893 42190285 -43798649 - L1ME2 LINE L1 -5193 1068 687 2004 155 9 12 chr18 42190285 42190620 -43798314 - MER1B DNA MER1_type -3 334 1 616 302 79 55 chr18 42190620 42191247 -43797687 - L1ME2 LINE L1 -5574 687 35 518 325 10 25 chr18 42191965 42192168 -43796766 + MIR SINE MIR 11 210 -52 2659 203 35 17 chr18 42192264 42192855 -43796079 - MER7C DNA MER2_type 0 602 1 239 211 0 0 chr18 42192862 42192914 -43796020 - L1MC4 LINE L1 -1339 6703 6652 1596 190 81 82 chr18 42192960 42193436 -43795498 + MLT2B1 LTR ERVL 1 477 -43 198 71 0 0 chr18 42193436 42193464 -43795470 + (TG)n Simple_repeat Simple_repeat 1 28 0 1596 190 81 82 chr18 42193464 42193508 -43795426 + MLT2B1 LTR ERVL 477 520 0 275 322 50 16 chr18 42194398 42194519 -43794415 - L2 LINE L2 -9 3304 3180 21 36 0 0 chr18 42195557 42195585 -43793349 + AT_rich Low_complexity Low_complexity 1 28 0 2343 33 3 93 chr18 42195929 42196263 -43792671 + AluY SINE Alu 1 304 -7 414 0 0 0 chr18 42196307 42196392 -43792542 + (TA)n Simple_repeat Simple_repeat 1 131 0 414 0 0 0 chr18 42196392 42196438 -43792496 + (TA)n Simple_repeat Simple_repeat 2 47 0 186 274 0 0 chr18 42196693 42196744 -43792190 - L2 LINE L2 -540 2774 2724 283 344 16 8 chr18 42197632 42197754 -43791180 + CT-rich Low_complexity Low_complexity 3 125 0 183 188 0 0 chr18 42198010 42198042 -43790892 + L2 LINE L2 2506 2537 -777 511 262 29 82 chr18 42200790 42200996 -43787938 - MIR SINE MIR -6 256 62 28 0 0 0 chr18 42201994 42202022 -43786912 + AT_rich Low_complexity Low_complexity 1 28 0 451 247 162 13 chr18 42204781 42204935 -43783999 - MER5A DNA MER1_type 0 189 13 2023 120 62 0 chr18 42204979 42205271 -43783663 + AluSx SINE Alu 1 310 -2 209 278 19 0 chr18 42205271 42205325 -43783609 + L2 LINE L2 3259 3313 0 181 341 33 11 chr18 42205512 42205603 -43783331 - MIR3 SINE MIR -13 195 103 202 250 19 0 chr18 42205697 42205749 -43783185 + MIR SINE MIR 84 136 -72 242 279 38 0 chr18 42207120 42207199 -43781735 + MLT1F LTR MaLR 1 82 -460 202 355 11 11 chr18 42207848 42207941 -43780993 + MIR3 SINE MIR 110 202 -6 616 238 6 52 chr18 42208726 42208898 -43780036 - MIR SINE MIR -46 216 53 265 304 25 56 chr18 42209650 42209811 -43779123 - MER117 DNA MER1_type -31 166 11 23 33 0 0 chr18 42211760 42211790 -43777144 + AT_rich Low_complexity Low_complexity 1 30 0 1075 319 121 53 chr18 42212209 42212715 -43776219 + L2 LINE L2 1990 2460 -812 237 33 0 0 chr18 42212715 42212745 -43776189 + (TG)n Simple_repeat Simple_repeat 2 31 0 1075 319 121 53 chr18 42212745 42212920 -43776014 + L2 LINE L2 2460 2622 -650 782 173 0 0 chr18 42212920 42213053 -43775881 - FLAM_C SINE Alu 0 133 1 1075 319 121 53 chr18 42213053 42213554 -43775380 + L2 LINE L2 2622 3270 -2 1715 161 0 37 chr18 42213577 42213899 -43775035 + AluJb SINE Alu 1 310 -2 1209 180 35 35 chr18 42213965 42214221 -43774713 - AluJo SINE Alu -25 287 32 1130 186 34 52 chr18 42215454 42215723 -43773211 + AluJo SINE Alu 49 312 0 228 229 0 0 chr18 42216727 42216810 -43772124 + T-rich Low_complexity Low_complexity 1 83 0 239 266 51 13 chr18 42216911 42216990 -43771944 - MIR SINE MIR -73 189 108 236 275 0 14 chr18 42217640 42217709 -43771225 + A-rich Low_complexity Low_complexity 3 70 0 204 43 65 22 chr18 42219616 42219662 -43769272 + (CAAA)n Simple_repeat Simple_repeat 3 50 0 180 344 21 10 chr18 42220652 42220748 -43768186 + MIR3 SINE MIR 111 207 -1 193 206 52 0 chr18 42220825 42220922 -43768012 + (TA)n Simple_repeat Simple_repeat 2 103 0 1331 221 19 4 chr18 42222240 42222507 -43766427 - MLT1A1 LTR MaLR -94 271 1 383 359 94 24 chr18 42224082 42224508 -43764426 - LTR33 LTR ERVL -65 456 1 541 281 81 19 chr18 42224846 42225056 -43763878 - ERVL LTR ERVL -483 5281 5059 1073 274 29 26 chr18 42225145 42225451 -43763483 - MLT1I LTR MaLR 0 409 103 374 278 34 76 chr18 42225756 42225943 -43762991 + LTR33 LTR ERVL 3 183 -338 5156 103 5 0 chr18 42226144 42226882 -43762052 + L1PA11 LINE L1 5425 6166 -8 27 0 0 0 chr18 42229889 42229916 -43759018 + AT_rich Low_complexity Low_complexity 1 27 0 183 129 0 0 chr18 42230398 42230429 -43758505 + (T)n Simple_repeat Simple_repeat 1 31 0 2115 188 29 12 chr18 42230464 42230880 -43758054 - MSTB LTR MaLR -3 423 1 1727 160 15 91 chr18 42231797 42232203 -43756731 + THE1C LTR MaLR 1 375 0 23 68 0 0 chr18 42233562 42233606 -43755328 + AT_rich Low_complexity Low_complexity 1 44 0 2317 176 31 0 chr18 42235206 42235620 -43753314 - MSTA LTR MaLR 0 428 2 1727 181 3 10 chr18 42236623 42236926 -43752008 - AluJb SINE Alu -11 301 1 252 168 9 47 chr18 42237005 42237112 -43751822 + (TA)n Simple_repeat Simple_repeat 1 103 0 245 211 55 78 chr18 42237681 42237809 -43751125 - MER106B DNA MER1_type 0 1059 935 201 279 15 0 chr18 42237809 42237877 -43751057 + (TA)n Simple_repeat Simple_repeat 1 69 0 1336 204 15 8 chr18 42237989 42238277 -43750657 + AluJo SINE Alu 21 310 0 221 344 31 0 chr18 42239005 42239101 -43749833 - L2 LINE L2 -1 3312 3214 332 328 86 6 chr18 42239370 42239544 -43749390 - MIR SINE MIR -69 193 6 184 350 0 0 chr18 42239547 42239607 -43749327 + MIR3 SINE MIR 148 207 -1 653 50 69 13 chr18 42239880 42240039 -43748895 + (TA)n Simple_repeat Simple_repeat 2 169 0 30 0 0 0 chr18 42240044 42240074 -43748860 + AT_rich Low_complexity Low_complexity 1 30 0 320 102 90 12 chr18 42240077 42240243 -43748691 + (TA)n Simple_repeat Simple_repeat 1 179 0 214 115 39 0 chr18 42240453 42240505 -43748429 + (TA)n Simple_repeat Simple_repeat 2 55 0 34 24 0 0 chr18 42240609 42240650 -43748284 + AT_rich Low_complexity Low_complexity 1 41 0 424 108 78 6 chr18 42240655 42240822 -43748112 + (TA)n Simple_repeat Simple_repeat 2 180 0 24 32 0 0 chr18 42240920 42240951 -43747983 + AT_rich Low_complexity Low_complexity 1 31 0 240 86 0 0 chr18 42241115 42241150 -43747784 + (TA)n Simple_repeat Simple_repeat 1 35 0 420 20 0 0 chr18 42241466 42241515 -43747419 + (TA)n Simple_repeat Simple_repeat 1 49 0 315 0 0 0 chr18 42241514 42241549 -43747385 + (GA)n Simple_repeat Simple_repeat 2 36 0 * 683 216 0 0 chr18 42242620 42242745 -43746189 + FLAM_C SINE Alu 6 130 -13 325 279 6 70 chr18 42242892 42243050 -43745884 - MER103 DNA DNA -7 159 12 211 271 188 10 chr18 42243143 42243239 -43745695 + MIR SINE MIR 30 142 -66 21 57 0 0 chr18 42243396 42243431 -43745503 + AT_rich Low_complexity Low_complexity 1 35 0 303 268 27 44 chr18 42246061 42246244 -43742690 + (CA)n Simple_repeat Simple_repeat 1 180 0 2714 7 0 0 chr18 42246528 42246819 -43742115 - AluYb8 SINE Alu -9 309 19 289 341 125 37 chr18 42247112 42247519 -43741415 + L2 LINE L2 2871 3313 0 312 127 0 0 chr18 42248463 42248518 -43740416 + (TG)n Simple_repeat Simple_repeat 2 56 0 208 197 0 79 chr18 42248750 42248826 -43740108 + A-rich Low_complexity Low_complexity 2 71 0 187 319 0 0 chr18 42249104 42249151 -43739783 + L2 LINE L2 3262 3308 -5 274 233 41 0 chr18 42249151 42249224 -43739710 + GA-rich Low_complexity Low_complexity 4 79 0 301 202 100 11 chr18 42250906 42251019 -43737915 + L1ME LINE L1 5622 5758 -404 330 78 0 0 chr18 42251664 42251715 -43737219 - MADE1 DNA Mariner 0 80 30 22 0 0 0 chr18 42252254 42252276 -43736658 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr18 42252387 42252415 -43736519 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr18 42252594 42252629 -43736305 + AT_rich Low_complexity Low_complexity 1 35 0 1992 129 36 3 chr18 42253704 42254006 -43734928 - AluSx SINE Alu 0 312 1 901 214 66 52 chr18 42254137 42254408 -43734526 - MER93b LTR ERV1 0 373 99 353 262 48 55 chr18 42254898 42255043 -43733891 - MER5A DNA MER1_type -3 186 43 251 349 156 30 chr18 42256132 42256594 -43732340 - L3 LINE CR1 -126 1451 932 56 79 0 0 chr18 42257716 42257842 -43731092 + AT_rich Low_complexity Low_complexity 1 126 0 348 301 11 0 chr18 42257873 42257966 -43730968 + L2 LINE L2 1859 1952 -1362 21 0 0 0 chr18 42258115 42258136 -43730798 + AT_rich Low_complexity Low_complexity 1 21 0 513 322 7 0 chr18 42258155 42258304 -43730630 + L2 LINE L2 3164 3313 0 203 323 36 51 chr18 42258717 42258849 -43730085 + MIR SINE MIR 35 163 -66 299 336 17 9 chr18 42258925 42259041 -43729893 - MIR3 SINE MIR -5 203 87 1993 164 25 25 chr18 42259625 42259872 -43729062 - MER57A LTR ERV1 -38 365 119 1920 168 48 28 chr18 42259872 42260229 -43728705 - THE1B LTR MaLR 0 364 1 10611 117 11 24 chr18 42260229 42261436 -43727498 - THE1B-int LTR MaLR 0 1580 398 2413 84 0 6 chr18 42261436 42261747 -43727187 + AluY SINE Alu 1 309 -2 10611 117 11 24 chr18 42261747 42262140 -43726794 - THE1B-int LTR MaLR -1182 398 1 1991 133 44 39 chr18 42262140 42262502 -43726432 - THE1B LTR MaLR 0 364 1 1993 164 25 25 chr18 42262502 42262617 -43726317 - MER57A LTR ERV1 -281 122 1 39 38 0 0 chr18 42262900 42262953 -43725981 + AT_rich Low_complexity Low_complexity 1 53 0 2210 198 65 99 chr18 42264082 42264800 -43724134 + LTR8A LTR ERV1 34 727 0 356 401 47 9 chr18 42266278 42266490 -43722444 - L2 LINE L2 -179 3093 2874 257 146 0 0 chr18 42266496 42266537 -43722397 + Alu SINE Alu 252 292 -10 288 256 37 12 chr18 42266570 42266652 -43722282 + MIR SINE MIR 60 143 -119 855 287 70 14 chr18 42266867 42267153 -43721781 + L3 LINE CR1 1201 1502 -75 1534 184 268 34 chr18 42268715 42269219 -43719715 - LTR29 LTR ERV1 0 622 1 1222 135 126 17 chr18 42269252 42269482 -43719452 + MER4B LTR ERV1 1 255 -355 * 1450 137 4 56 chr18 42269469 42269718 -43719216 + MER4A LTR ERV1 429 664 0 1824 179 51 5 chr18 42271331 42271804 -43717130 - MER34C LTR ERV1 0 565 37 1585 192 7 3 chr18 42272119 42272405 -43716529 - AluJb SINE Alu 0 312 26 1197 189 84 37 chr18 42272410 42272732 -43716202 - LTR27 LTR ERV1 -2 634 298 231 158 0 0 chr18 42272781 42272819 -43716115 - MER61B LTR ERV1 -286 139 102 * 846 187 11 33 chr18 42272796 42272978 -43715956 - LTR28 LTR ERV1 -842 178 1 1224 191 50 56 chr18 42273183 42273486 -43715448 - AluJo SINE Alu 0 302 2 25 51 0 0 chr18 42273660 42273699 -43715235 + AT_rich Low_complexity Low_complexity 1 39 0 1011 198 53 132 chr18 42274012 42274768 -43714166 - LTR8A LTR ERV1 0 727 1 442 243 28 0 chr18 42274768 42274875 -43714059 + MIR SINE MIR 42 151 -111 1598 213 26 3 chr18 42274878 42275230 -43713704 + MER46B DNA MER2_type 1 235 -1 1231 227 81 77 chr18 42275267 42275838 -43713096 - MER34B LTR ERV1 -6 559 10 281 203 34 0 chr18 42275840 42275899 -43713035 + MIR SINE MIR 197 257 -5 796 237 5 32 chr18 42275911 42276101 -43712833 - AluJb SINE Alu -3 309 125 863 216 6 0 chr18 42276127 42276298 -43712636 + FRAM SINE Alu 1 170 -6 213 211 0 0 chr18 42276730 42276787 -43712147 + A-rich Low_complexity Low_complexity 1 57 0 235 315 41 0 chr18 42277073 42277146 -43711788 - MIR3 SINE MIR -16 192 117 450 0 0 0 chr18 42278129 42278179 -43710755 + (CA)n Simple_repeat Simple_repeat 2 51 0 2449 87 35 8 chr18 42278238 42278712 -43710222 + MER41A LTR ERV1 1 554 0 2819 187 72 5 chr18 42279024 42279596 -43709338 + LTR26E LTR ERV1 13 622 0 1188 208 143 57 chr18 42279838 42280368 -43708566 - MER34C LTR ERV1 -2 583 8 248 185 99 12 chr18 42280368 42280449 -43708485 - LTR37B LTR ERV1 -27 441 311 2400 184 93 55 chr18 42280623 42280861 -43708073 + LTR48 LTR ERV1 18 245 -350 1909 143 0 7 chr18 42280861 42281147 -43707787 + AluSc SINE Alu 1 284 -25 216 0 0 0 chr18 42281155 42281179 -43707755 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 2400 184 93 55 chr18 42281179 42281659 -43707275 + LTR48 LTR ERV1 251 593 -2 1225 202 193 17 chr18 42281775 42282132 -43706802 + MER31B LTR ERV1 1 420 -46 297 205 26 86 chr18 42282205 42282322 -43706612 - LTR37A LTR ERV1 -277 149 40 22 0 0 0 chr18 42282707 42282729 -43706205 + AT_rich Low_complexity Low_complexity 1 22 0 1139 272 68 40 chr18 42282734 42283204 -43705730 + MLT1D LTR MaLR 1 483 -22 1274 174 93 176 chr18 42283233 42283380 -43705554 - LTR8A LTR ERV1 -17 710 552 2209 122 0 0 chr18 42283380 42283676 -43705258 - AluSx SINE Alu -13 299 4 1274 174 93 176 chr18 42283676 42284268 -43704666 - LTR8A LTR ERV1 -175 552 35 1852 174 3 3 chr18 42284268 42284567 -43704367 - AluSx SINE Alu -13 299 1 1274 174 93 176 chr18 42284567 42284600 -43704334 - LTR8A LTR ERV1 -692 35 1 412 249 27 45 chr18 42284811 42285032 -43703902 - LTR37B LTR ERV1 -9 459 243 31 26 0 0 chr18 42285463 42285501 -43703433 + AT_rich Low_complexity Low_complexity 1 38 0 8383 218 20 8 chr18 42286449 42288400 -43700534 + L1P LINE L1 2624 4598 -1548 979 251 77 57 chr18 42288508 42288695 -43700239 - L1MD1 LINE L1 -27 6215 6033 312 70 0 0 chr18 42288695 42288738 -43700196 + (TG)n Simple_repeat Simple_repeat 1 43 0 979 251 77 57 chr18 42288738 42288989 -43699945 - L1MD1 LINE L1 -209 6033 5768 537 184 48 0 chr18 42289330 42289433 -43699501 - MER58B DNA MER1_type -29 312 205 394 234 120 34 chr18 42290778 42290953 -43697981 - MER2 DNA MER2_type 0 345 156 2052 171 85 0 chr18 42290955 42291330 -43697604 - MSTA LTR MaLR -2 426 20 895 185 6 0 chr18 42291335 42291492 -43697442 - MER2 DNA MER2_type -187 158 1 206 321 104 22 chr18 42291963 42292097 -43696837 + L2 LINE L2 3169 3313 0 283 262 87 47 chr18 42292252 42292401 -43696533 + MIR SINE MIR 12 166 -96 215 246 273 18 chr18 42293812 42293922 -43695012 + MIR SINE MIR 2 139 -123 261 329 25 44 chr18 42293985 42294143 -43694791 + MIR SINE MIR 62 216 -46 351 244 0 12 chr18 42295455 42295537 -43693397 - MER94 DNA DNA -53 81 1 331 270 15 36 chr18 42295752 42295889 -43693045 + L1MC4 LINE L1 7908 8041 -1 189 258 35 21 chr18 42296704 42296786 -43692148 - MIR SINE MIR -62 146 111 2358 255 58 32 chr18 42297193 42297327 -43691607 - L1ME1 LINE L1 -7 6228 6099 1795 173 7 0 chr18 42297327 42297633 -43691301 - AluSq SINE Alu -2 311 4 2358 255 58 32 chr18 42297633 42298798 -43690136 - L1ME1 LINE L1 -136 6099 4908 1537 155 21 24 chr18 42298822 42299112 -43689822 - AluY SINE Alu -8 303 15 602 70 0 0 chr18 42299112 42299198 -43689736 + AluSg/x SINE Alu 218 303 -7 333 64 0 12 chr18 42299239 42299297 -43689637 - AluY SINE Alu -261 40 1 984 178 65 18 chr18 42299542 42299815 -43689119 - AluJb SINE Alu 0 312 28 2554 260 53 46 chr18 42299835 42300647 -43688287 - L1ME1 LINE L1 -3224 2991 2187 1464 227 3 3 chr18 42300647 42300947 -43687987 - AluJo SINE Alu 0 302 3 2554 260 53 46 chr18 42300947 42301525 -43687409 - L1ME1 LINE L1 -4028 2187 1624 2206 90 0 0 chr18 42301525 42301802 -43687132 - AluSc SINE Alu -25 284 8 2554 260 53 46 chr18 42301802 42302068 -43686866 - L1ME1 LINE L1 -4591 1624 1361 481 303 37 14 chr18 42302225 42302443 -43686491 - L1ME1 LINE L1 -6140 256 34 * 6974 231 49 17 chr18 42302441 42302785 -43686149 - L1MC1 LINE L1 0 6333 6001 1357 232 3 19 chr18 42302785 42303095 -43685839 - AluJo SINE Alu -7 305 1 6974 231 49 17 chr18 42303095 42303262 -43685672 - L1MC1 LINE L1 -332 6001 5841 2283 131 8 16 chr18 42303262 42303629 -43685305 + THE1B LTR MaLR 1 364 0 6974 231 49 17 chr18 42303629 42305251 -43683683 - L1MC1 LINE L1 -492 5841 4272 252 0 0 0 chr18 42305251 42305279 -43683655 + (TTCC)n Simple_repeat Simple_repeat 1 28 0 1244 50 6 17 chr18 42305279 42305459 -43683475 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 6974 231 49 17 chr18 42305459 42306502 -43682432 - L1MC1 LINE L1 -2061 4272 3041 2305 102 7 0 chr18 42306502 42306806 -43682128 - AluSx SINE Alu -6 306 1 6974 231 49 17 chr18 42306806 42306886 -43682048 - L1MC1 LINE L1 -3292 3041 2965 1536 162 4 12 chr18 42306886 42307139 -43681795 + MER21A LTR ERV1 14 264 -667 2865 167 39 50 chr18 42307144 42307706 -43681228 + MER21A LTR ERV1 376 931 0 5336 139 28 31 chr18 42308262 42308457 -43680477 + MER49 LTR ERV1 1 195 -728 2405 65 0 3 chr18 42308457 42308765 -43680169 + AluY SINE Alu 1 307 -4 5336 139 28 31 chr18 42308765 42309485 -43679449 + MER49 LTR ERV1 195 914 -9 901 207 0 0 chr18 42310178 42310342 -43678592 - FRAM SINE Alu -2 164 1 1282 178 21 14 chr18 42310343 42310629 -43678305 - MER33 DNA MER1_type -36 288 1 1987 121 11 0 chr18 42310957 42311239 -43677695 + AluSp SINE Alu 27 311 -2 21 0 0 0 chr18 42311344 42311365 -43677569 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr18 42311823 42311845 -43677089 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 2161 117 3 7 chr18 42311845 42312153 -43676781 - AluSq SINE Alu -5 308 2 277 297 81 51 chr18 42312307 42312543 -43676391 - L1MC/D LINE L1 -479 5642 5403 483 299 82 21 chr18 42312648 42312992 -43675942 - L1MC/D LINE L1 -876 5270 4905 457 321 48 12 chr18 42313249 42313414 -43675520 - MIR SINE MIR -73 189 19 326 264 132 60 chr18 42313497 42313732 -43675202 + MLT1L LTR MaLR 11 262 -353 1662 154 54 0 chr18 42314458 42314738 -43674196 + AluJb SINE Alu 5 299 -13 351 305 56 5 chr18 42314786 42314969 -43673965 + MIR SINE MIR 33 225 -37 1526 207 36 12 chr18 42315200 42315529 -43673405 + MLT1A1 LTR MaLR 18 354 -11 205 179 0 0 chr18 42316270 42316309 -43672625 + (CAAAC)n Simple_repeat Simple_repeat 2 40 0 2370 85 7 3 chr18 42316735 42317041 -43671893 - AluY SINE Alu 0 311 5 1842 163 0 29 chr18 42317219 42317532 -43671402 - AluJo SINE Alu -8 304 1 3153 169 27 15 chr18 42317560 42318115 -43670819 - L1MA6 LINE L1 -5 6295 5731 2744 144 9 0 chr18 42318115 42318539 -43670395 - MSTA LTR MaLR 0 428 1 3153 169 27 15 chr18 42318539 42318582 -43670352 - L1MA6 LINE L1 -569 5731 5690 2403 178 13 5 chr18 42318582 42319065 -43669869 + L1MA6 LINE L1 5221 5707 -593 1595 207 13 0 chr18 42320473 42320778 -43668156 - AluJb SINE Alu -2 310 2 243 353 98 44 chr18 42320818 42321022 -43667912 - L3 LINE CR1 -57 1520 1306 25 0 0 0 chr18 42321065 42321090 -43667844 + AT_rich Low_complexity Low_complexity 1 25 0 275 344 122 26 chr18 42321416 42321605 -43667329 - L3 LINE CR1 -492 1085 879 1384 191 4 27 chr18 42321648 42321910 -43667024 + AluJb SINE Alu 49 304 -8 377 302 62 16 chr18 42322388 42322517 -43666417 - L2 LINE L2 -7 3306 3172 1164 239 80 109 chr18 42322802 42323379 -43665555 + MER68 LTR ERV1 2 561 -1 1964 170 75 12 chr18 42323603 42324003 -43664931 + MSTB LTR MaLR 1 425 -1 1228 204 147 13 chr18 42324234 42324548 -43664386 - MER110 LTR ERV1 -6 485 130 2064 209 13 33 chr18 42324548 42325008 -43663926 - MER82 DNA MER2_type 0 653 203 207 0 0 0 chr18 42325008 42325031 -43663903 + (TG)n Simple_repeat Simple_repeat 2 24 0 621 224 0 0 chr18 42325039 42325155 -43663779 - MER82 DNA MER2_type -536 117 2 261 193 53 0 chr18 42325177 42325234 -43663700 - MER110 LTR ERV1 -431 60 1 22 56 0 0 chr18 42325607 42325643 -43663291 + AT_rich Low_complexity Low_complexity 1 36 0 568 307 65 33 chr18 42326066 42326410 -43662524 + LTR16A LTR ERVL 76 453 -4 24 0 0 0 chr18 42326556 42326580 -43662354 + AT_rich Low_complexity Low_complexity 1 24 0 888 301 82 60 chr18 42327434 42328531 -43660403 + L2 LINE L2 2185 3313 0 331 292 88 0 chr18 42329216 42329353 -43659581 + MLT1E-int LTR MaLR 1218 1366 -5 1433 227 73 67 chr18 42329358 42329943 -43658991 + MLT1E LTR MaLR 1 589 -4 507 294 43 27 chr18 42329966 42330153 -43658781 + MLT2F LTR ERVL 275 464 -199 2596 189 30 51 chr18 42331259 42331675 -43657259 + L1MB7 LINE L1 5509 5907 -277 420 20 0 0 chr18 42331675 42331724 -43657210 + (TA)n Simple_repeat Simple_repeat 1 49 0 2596 189 30 51 chr18 42331724 42331979 -43656955 + L1MB7 LINE L1 5907 6166 -18 207 0 0 0 chr18 42331984 42332007 -43656927 + (TA)n Simple_repeat Simple_repeat 1 23 0 192 250 288 0 chr18 42333655 42333735 -43655199 + L2 LINE L2 3163 3265 -7 23 33 0 0 chr18 42334966 42334996 -43653938 + AT_rich Low_complexity Low_complexity 1 30 0 212 366 117 20 chr18 42337257 42337555 -43651379 + L2 LINE L2 1965 2291 -1023 227 424 18 18 chr18 42338068 42338233 -43650701 + L2 LINE L2 3108 3272 0 192 125 0 0 chr18 42338268 42338300 -43650634 + (TAGA)n Simple_repeat Simple_repeat 2 33 0 2597 209 19 19 chr18 42338317 42338849 -43650085 - MLT2B3 LTR ERVL -22 532 1 2563 49 0 7 chr18 42339016 42339320 -43649614 + AluSc SINE Alu 1 302 -7 27 0 0 0 chr18 42339455 42339482 -43649452 + GC_rich Low_complexity Low_complexity 1 27 0 198 0 0 0 chr18 42339500 42339522 -43649412 + (A)n Simple_repeat Simple_repeat 1 22 0 741 276 9 49 chr18 42339881 42340106 -43648828 - MER58A DNA MER1_type -8 216 1 290 298 0 19 chr18 42340121 42340225 -43648709 + MIR SINE MIR 160 261 -1 598 356 27 22 chr18 42340412 42340783 -43648151 + L1MEc LINE L1 39 411 -5985 276 111 0 0 chr18 42340803 42340848 -43648086 + (TG)n Simple_repeat Simple_repeat 2 46 0 465 118 13 0 chr18 42340980 42341056 -43647878 - MADE1 DNA Mariner 0 80 4 208 299 0 0 chr18 42341555 42341632 -43647302 + T-rich Low_complexity Low_complexity 5 81 0 526 280 66 55 chr18 42341723 42342458 -43646476 - L1MEd LINE L1 -4730 1580 793 353 338 66 25 chr18 42342546 42342744 -43646190 - L1MEd LINE L1 -5451 668 463 654 265 44 6 chr18 42342984 42343165 -43645769 + MIR SINE MIR 20 207 -55 22 70 0 0 chr18 42343165 42343208 -43645726 + AT_rich Low_complexity Low_complexity 1 43 0 36 0 0 0 chr18 42343265 42343301 -43645633 + AT_rich Low_complexity Low_complexity 1 36 0 3629 166 87 46 chr18 42343318 42344680 -43644254 + L1MA4 LINE L1 4745 6185 -115 573 202 8 0 chr18 42344722 42344846 -43644088 + L1MA4 LINE L1 6165 6289 -11 186 266 0 0 chr18 42345156 42345235 -43643699 + (TA)n Simple_repeat Simple_repeat 2 80 0 307 398 27 0 chr18 42346095 42346316 -43642618 + L2 LINE L2 2513 2739 -575 238 250 25 12 chr18 42346317 42346397 -43642537 + GA-rich Low_complexity Low_complexity 1 81 0 3122 164 23 7 chr18 42347860 42348458 -43640476 + L1MC2 LINE L1 5735 6342 -2 9226 193 17 25 chr18 42348557 42348907 -43640027 + L1MA8 LINE L1 3179 3530 -2761 2380 60 0 13 chr18 42348907 42349247 -43639687 + AluY SINE Alu 1 336 0 9226 193 17 25 chr18 42349247 42349352 -43639582 + L1MA8 LINE L1 3530 3634 -2657 1873 149 51 0 chr18 42349352 42349648 -43639286 - AluSx SINE Alu -1 311 1 9226 193 17 25 chr18 42349648 42350321 -43638613 + L1MA8 LINE L1 3634 4311 -1980 1892 67 127 0 chr18 42350321 42350574 -43638360 - AluY SINE Alu -26 285 1 9226 193 17 25 chr18 42350574 42352362 -43636572 + L1MA8 LINE L1 4311 6070 -221 3515 95 32 4 chr18 42352365 42352869 -43636065 - L1PA8A LINE L1 0 6131 5614 1152 154 32 0 chr18 42352869 42353089 -43635845 + L1MA8 LINE L1 6061 6288 -3 28 0 0 0 chr18 42353286 42353314 -43635620 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr18 42354021 42354050 -43634884 + AT_rich Low_complexity Low_complexity 1 29 0 414 0 0 0 chr18 42355947 42355993 -43632941 + (TG)n Simple_repeat Simple_repeat 2 47 0 201 407 71 0 chr18 42356580 42356720 -43632214 + L2 LINE L2 1081 1230 -2084 524 210 0 24 chr18 42356853 42357020 -43631914 + CT-rich Low_complexity Low_complexity 2 164 0 272 329 45 45 chr18 42357592 42357835 -43631099 - L2 LINE L2 -46 3267 3025 396 320 51 20 chr18 42357952 42358149 -43630785 - L2 LINE L2 -432 2882 2680 321 335 93 46 chr18 42358185 42358796 -43630138 + L2 LINE L2 2035 2674 -640 191 377 77 29 chr18 42359049 42359256 -43629678 + L2 LINE L2 2662 2878 -436 233 369 49 33 chr18 42359494 42359616 -43629318 + L2 LINE L2 3149 3272 0 25 31 0 0 chr18 42360288 42360320 -43628614 + AT_rich Low_complexity Low_complexity 1 32 0 1597 255 68 38 chr18 42360372 42361008 -43627926 - L1MC4 LINE L1 -144 7898 7244 669 281 0 18 chr18 42361068 42361235 -43627699 + MER5A DNA MER1_type 26 189 0 446 356 23 17 chr18 42361241 42361415 -43627519 - MER5B DNA MER1_type -3 175 1 555 290 15 0 chr18 42361432 42361563 -43627371 - MER5B DNA MER1_type 0 178 46 493 258 66 40 chr18 42361563 42361714 -43627220 + MER5B DNA MER1_type 24 178 0 414 330 80 18 chr18 42361794 42362018 -43626916 - MIR SINE MIR -16 246 9 26 0 0 0 chr18 42363614 42363640 -43625294 + AT_rich Low_complexity Low_complexity 1 26 0 2576 97 8 0 chr18 42364394 42364746 -43624188 - THE1A LTR MaLR 0 355 1 10664 102 34 1 chr18 42364746 42366276 -43622658 - THE1A-int LTR MaLR 0 1580 1 1644 176 8 61 chr18 42366276 42366651 -43622283 - THE1A LTR MaLR 0 355 1 465 317 39 58 chr18 42366895 42367100 -43621834 - MIR SINE MIR -3 259 59 225 451 0 0 chr18 42367333 42367466 -43621468 + L2 LINE L2 2935 3067 -205 199 367 151 38 chr18 42367494 42367813 -43621121 + L2 LINE L2 2543 2897 -417 952 255 127 99 chr18 42368223 42368760 -43620174 + MLT1G1 LTR MaLR 44 595 0 271 176 15 15 chr18 42368890 42368958 -43619976 + (TA)n Simple_repeat Simple_repeat 2 69 0 626 317 20 0 chr18 42369597 42369796 -43619138 + MIR SINE MIR 35 237 -25 1470 249 59 7 chr18 42370333 42370771 -43618163 + LTR37B LTR ERV1 6 466 -2 413 311 53 11 chr18 42370824 42371167 -43617767 - L1ME LINE L1 -3120 2960 2604 288 300 92 32 chr18 42371292 42372000 -43616934 - L1ME LINE L1 -4648 1613 822 483 63 0 0 chr18 42372655 42372718 -43616216 + (CA)n Simple_repeat Simple_repeat 2 64 0 281 260 39 13 chr18 42374384 42374461 -43614473 + MER20B DNA MER1_type 77 155 -628 359 350 73 7 chr18 42375875 42376012 -43612922 - L2 LINE L2 0 3272 3127 275 395 54 6 chr18 42376716 42376883 -43612051 - L2 LINE L2 -433 2881 2707 24 0 0 0 chr18 42377349 42377373 -43611561 + AT_rich Low_complexity Low_complexity 1 24 0 275 329 43 34 chr18 42378166 42378310 -43610624 - MIR SINE MIR -57 151 22 527 325 189 37 chr18 42380608 42381011 -43607923 - L2 LINE L2 -17 3296 2833 1058 275 75 21 chr18 42381041 42381376 -43607558 - MLT1A2 LTR MaLR 0 374 22 1439 210 87 56 chr18 42381707 42382121 -43606813 - MER39 LTR ERV1 -20 687 261 232 244 44 56 chr18 42382108 42382198 -43606736 - LTR48B LTR ERV1 -555 89 1 * 212 196 0 18 chr18 42383230 42383286 -43605648 + (TATAA)n Simple_repeat Simple_repeat 2 56 0 248 232 0 130 chr18 42385009 42385147 -43603787 - MIR SINE MIR -57 205 86 286 352 93 16 chr18 42386254 42386436 -43602498 + L2 LINE L2 2778 2973 -341 189 0 0 0 chr18 42386794 42386815 -43602119 + (T)n Simple_repeat Simple_repeat 1 21 0 2198 109 0 0 chr18 42387812 42388115 -43600819 - AluSc SINE Alu -6 303 1 23 0 0 0 chr18 42388123 42388146 -43600788 + AT_rich Low_complexity Low_complexity 1 23 0 1452 139 72 4 chr18 42388868 42389119 -43599815 + Tigger5 DNA MER2_type 2056 2323 0 603 301 41 21 chr18 42389566 42389801 -43599133 - MIR SINE MIR -20 242 2 225 297 71 58 chr18 42390007 42390162 -43598772 - MIR SINE MIR -55 207 51 180 176 0 0 chr18 42392036 42392070 -43596864 + A-rich Low_complexity Low_complexity 1 34 0 1952 120 116 71 chr18 42392706 42393113 -43595821 - MSTA LTR MaLR -2 426 2 541 294 34 0 chr18 42393254 42393400 -43595534 + MER45A DNA AcHobo 28 178 0 375 423 36 22 chr18 42394257 42394531 -43594403 + L2 LINE L2 2510 2787 -527 226 375 31 19 chr18 42394632 42394792 -43594142 - L2 LINE L2 -56 3257 3096 1937 284 11 14 chr18 42394825 42395714 -43593220 + L1M3c LINE L1 1612 2487 -4362 1212 161 144 71 chr18 42395714 42396097 -43592837 - MSTB1 LTR MaLR 0 432 1 517 307 95 27 chr18 42396097 42396559 -43592375 + L1M1 LINE L1 2873 3448 -4168 333 0 0 0 chr18 42396559 42396596 -43592338 + (CA)n Simple_repeat Simple_repeat 2 38 0 517 307 95 27 chr18 42396596 42396826 -43592108 + L1M1 LINE L1 3448 3661 -3955 2180 255 95 61 chr18 42396830 42397974 -43590960 + L1M4c LINE L1 1029 2294 -4088 253 154 0 0 chr18 42397974 42398013 -43590921 + tRNA-Met-e tRNA tRNA 1 39 -36 2180 255 95 61 chr18 42398013 42398567 -43590367 + L1M4c LINE L1 2294 2827 -3555 505 317 80 45 chr18 42398600 42398975 -43589959 - L2 LINE L2 -410 2904 2517 1132 313 119 29 chr18 42399413 42400104 -43588830 - LTR41 LTR ERVL -15 758 6 760 313 75 21 chr18 42400109 42400270 -43588664 - L1MCa LINE L1 -4845 2096 1945 240 35 0 0 chr18 42400270 42400299 -43588635 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 760 313 75 21 chr18 42400299 42400766 -43588168 - L1MCa LINE L1 -4996 1945 1434 972 226 4 42 chr18 42400769 42401008 -43587926 + AluJo SINE Alu 1 230 -82 1279 202 22 29 chr18 42401018 42401295 -43587639 + AluJo SINE Alu 8 282 -30 28 48 0 0 chr18 42401295 42401337 -43587597 + AT_rich Low_complexity Low_complexity 1 42 0 639 276 39 28 chr18 42401338 42401624 -43587310 - L1MCa LINE L1 -4984 1439 1151 35 24 0 0 chr18 42402887 42402929 -43586005 + AT_rich Low_complexity Low_complexity 1 42 0 243 0 0 0 chr18 42403586 42403613 -43585321 + (TA)n Simple_repeat Simple_repeat 1 27 0 30 27 0 0 chr18 42403947 42403984 -43584950 + AT_rich Low_complexity Low_complexity 1 37 0 2779 271 59 27 chr18 42405313 42405605 -43583329 + L1M4 LINE L1 37 318 -6078 5998 129 16 18 chr18 42405605 42406575 -43582359 - LTR5 LTR ERVK 0 969 1 2779 271 59 27 chr18 42406575 42407441 -43581493 + L1M4 LINE L1 318 1232 -5164 2018 270 59 13 chr18 42407443 42408374 -43580560 + L1M4c LINE L1 2827 3800 -2582 246 216 0 0 chr18 42408415 42408466 -43580468 + GA-rich Low_complexity Low_complexity 2 52 0 3318 263 55 57 chr18 42408471 42408628 -43580306 + L1M4c LINE L1 3798 3954 -2428 1455 193 74 52 chr18 42408628 42409048 -43579886 - LTR3 LTR ERVK 0 429 1 3318 263 55 57 chr18 42409048 42410640 -43578294 + L1M4c LINE L1 3954 5544 -838 619 257 42 0 chr18 42410640 42410784 -43578150 - MLT1D LTR MaLR -355 150 1 232 309 40 32 chr18 42410839 42410965 -43577969 + HAL1 LINE L1 1526 1652 -855 226 276 63 69 chr18 42411303 42411477 -43577457 + L1M4 LINE L1 2685 2857 -3358 7000 153 47 6 chr18 42411485 42412729 -43576205 - HSMAR2 DNA Mariner -7 1295 2 341 310 101 32 chr18 42412801 42412927 -43576007 + L1M4 LINE L1 2928 3044 -3171 1965 159 0 0 chr18 42412927 42413236 -43575698 - AluSg SINE Alu -1 309 1 341 310 101 32 chr18 42413236 42414121 -43574813 + L1M4 LINE L1 3044 4009 -2206 2858 249 45 39 chr18 42414122 42414291 -43574643 + L1MC3 LINE L1 6689 6855 -930 189 0 0 0 chr18 42414291 42414312 -43574622 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2858 249 45 39 chr18 42414312 42415115 -43573819 + L1MC3 LINE L1 6855 7667 -118 329 235 12 0 chr18 42415128 42415209 -43573725 + L1MC2 LINE L1 6250 6331 -13 230 242 16 0 chr18 42415232 42415294 -43573640 + L1ME3A LINE L1 6095 6157 -13 323 300 42 46 chr18 42415529 42415676 -43573258 + L1M4 LINE L1 4453 4600 -1615 1699 114 4 12 chr18 42415676 42415930 -43573004 - AluSx SINE Alu -19 293 42 323 300 42 46 chr18 42415930 42416065 -43572869 + L1M4 LINE L1 4600 4734 -1481 237 247 0 47 chr18 42416163 42416248 -43572686 + L1M4 LINE L1 4807 4887 -1328 438 304 92 10 chr18 42416394 42416858 -43572076 + L1M4 LINE L1 5062 5585 -658 2451 61 0 26 chr18 42417231 42417544 -43571390 + AluY SINE Alu 1 305 -6 1728 43 0 0 chr18 42418252 42418463 -43570471 + L1PA2 LINE L1 5940 6150 -5 243 311 92 10 chr18 42419010 42419216 -43569718 - L1M4 LINE L1 -1390 4756 4534 57 28 0 0 chr18 42419330 42419401 -43569533 + AT_rich Low_complexity Low_complexity 1 71 0 243 88 0 0 chr18 42420114 42420148 -43568786 + (CA)n Simple_repeat Simple_repeat 2 35 0 3773 33 0 2 chr18 42420621 42421071 -43567863 - L1PA5 LINE L1 -8 6146 5698 246 156 0 0 chr18 42421182 42421227 -43567707 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 232 27 54 0 chr18 42421451 42421488 -43567446 + (TG)n Simple_repeat Simple_repeat 2 40 0 523 346 112 29 chr18 42421527 42422038 -43566896 + L3 LINE CR1 985 1537 -40 1164 214 179 35 chr18 42422040 42422311 -43566623 - MSTB2 LTR MaLR 0 457 110 315 0 0 0 chr18 42422311 42422346 -43566588 + (TAA)n Simple_repeat Simple_repeat 2 36 0 1164 214 179 35 chr18 42422346 42422471 -43566463 - MSTB2 LTR MaLR -347 110 4 22 0 0 0 chr18 42422642 42422664 -43566270 + AT_rich Low_complexity Low_complexity 1 22 0 231 292 42 0 chr18 42423523 42423595 -43565339 + MLT1J LTR MaLR 437 511 0 926 146 139 66 chr18 42424229 42424530 -43564404 + MER33 DNA MER1_type 2 324 0 258 303 40 29 chr18 42424879 42425054 -43563880 - MER117 DNA MER1_type -20 177 1 326 367 137 30 chr18 42425126 42425220 -43563714 + L2 LINE L2 2333 2416 -898 2240 208 21 11 chr18 42425220 42425687 -43563247 + MER70A LTR ERVL 1 472 0 326 367 137 30 chr18 42425687 42426088 -43562846 + L2 LINE L2 2416 2881 -433 211 255 0 0 chr18 42426204 42426251 -43562683 - L2 LINE L2 -5 3308 3262 228 131 16 66 chr18 42427565 42427626 -43561308 + A-rich Low_complexity Low_complexity 2 59 0 198 0 0 0 chr18 42427916 42427938 -43560996 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 1049 241 97 56 chr18 42428738 42429292 -43559642 - L1MC5 LINE L1 -30 7931 7344 2064 109 3 10 chr18 42429292 42429594 -43559340 - AluSc SINE Alu -9 300 1 1049 241 97 56 chr18 42429594 42429698 -43559236 - L1MC5 LINE L1 -617 7344 7246 21 36 0 0 chr18 42429766 42429794 -43559140 + AT_rich Low_complexity Low_complexity 1 28 0 2104 118 10 0 chr18 42429864 42430168 -43558766 - AluSx SINE Alu -5 307 1 2068 273 64 34 chr18 42430482 42431324 -43557610 - L1ME3A LINE L1 -14 6156 5290 184 328 62 0 chr18 42432107 42432171 -43556763 - MIR SINE MIR -119 143 76 224 398 99 6 chr18 42432540 42432701 -43556233 - MIR3 SINE MIR -15 193 18 22 0 0 0 chr18 42433266 42433288 -43555646 + AT_rich Low_complexity Low_complexity 1 22 0 193 356 115 58 chr18 42434202 42434688 -43554246 + L2 LINE L2 2399 2912 -402 29 78 0 0 chr18 42434964 42435028 -43553906 + AT_rich Low_complexity Low_complexity 1 64 0 460 267 111 34 chr18 42435041 42435265 -43553669 + MLT1J1 LTR MaLR 3 236 -214 1674 242 9 3 chr18 42435426 42435773 -43553161 - MLT2C1 LTR ERVL -48 349 1 294 252 74 10 chr18 42435773 42435911 -43553023 + MLT1I LTR MaLR 289 398 -11 337 233 256 8 chr18 42437104 42437233 -43551701 - MIR SINE MIR 0 262 102 240 200 0 0 chr18 42438143 42438203 -43550731 + T-rich Low_complexity Low_complexity 1 60 0 284 282 26 13 chr18 42438322 42438400 -43550534 - MIR SINE MIR -62 146 68 27 49 0 0 chr18 42438734 42438775 -43550159 + AT_rich Low_complexity Low_complexity 1 41 0 237 65 0 0 chr18 42439931 42439962 -43548972 + (A)n Simple_repeat Simple_repeat 1 31 0 396 305 77 32 chr18 42439963 42440209 -43548725 + L1 LINE L1 3073 3329 -2817 216 286 0 0 chr18 42440390 42440439 -43548495 + (CATATA)n Simple_repeat Simple_repeat 3 51 0 273 293 12 24 chr18 42440530 42440612 -43548322 + L2 LINE L2 1840 1920 -1394 1232 112 71 58 chr18 42441920 42442144 -43546790 - MER30 DNA MER1_type 0 230 4 423 285 12 64 chr18 42442157 42442329 -43546605 + L2 LINE L2 3151 3313 0 659 240 43 43 chr18 42442684 42442917 -43546017 - MER106A DNA MER1_type -3 233 1 27 0 0 0 chr18 42443103 42443130 -43545804 + AT_rich Low_complexity Low_complexity 1 27 0 653 274 34 0 chr18 42443178 42443357 -43545577 - MER5A DNA MER1_type 0 189 5 207 0 0 0 chr18 42443959 42443982 -43544952 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 305 294 101 0 chr18 42445775 42445884 -43543050 + MER70B LTR ERVL 441 560 -18 4004 186 17 3 chr18 42445936 42446658 -43542276 - MER44D DNA MER2_type 0 605 2 235 298 19 19 chr18 42446924 42447082 -43541852 + (TA)n Simple_repeat Simple_repeat 2 159 0 2156 337 95 50 chr18 42448120 42449905 -43539029 - L2 LINE L2 -340 2974 1109 270 336 67 10 chr18 42450090 42450194 -43538740 - MIR3 SINE MIR -44 164 55 320 321 92 0 chr18 42451835 42451966 -43536968 - MIR3 SINE MIR -1 207 65 233 183 33 0 chr18 42452890 42452950 -43535984 - L1MC4 LINE L1 -1339 6703 6642 186 342 9 70 chr18 42453170 42453284 -43535650 + L2 LINE L2 3138 3244 -28 694 254 37 5 chr18 42453998 42454187 -43534747 + MER20 DNA MER1_type 24 218 -1 222 37 0 0 chr18 42455645 42455672 -43533262 + (A)n Simple_repeat Simple_repeat 1 27 0 196 169 12 60 chr18 42456926 42457009 -43531925 + CT-rich Low_complexity Low_complexity 2 80 0 222 37 0 0 chr18 42457009 42457036 -43531898 + (CA)n Simple_repeat Simple_repeat 1 27 0 186 43 0 0 chr18 42457179 42457202 -43531732 + (TG)n Simple_repeat Simple_repeat 2 24 0 1712 255 45 6 chr18 42457203 42457697 -43531237 - LTR40a LTR ERVL -4 515 3 206 292 42 42 chr18 42458608 42458704 -43530230 + L2 LINE L2 3216 3311 -2 2182 173 8 43 chr18 42461357 42461825 -43527109 - L1MB7 LINE L1 -15 6169 5718 360 335 18 24 chr18 42461842 42462009 -43526925 - L2 LINE L2 -694 2620 2455 211 205 0 0 chr18 42463145 42463184 -43525750 + (CATATA)n Simple_repeat Simple_repeat 6 44 0 263 355 24 8 chr18 42465701 42465825 -43523109 - L3 LINE CR1 -983 594 469 186 200 0 83 chr18 42466066 42466126 -43522808 - MIR SINE MIR -30 232 178 213 108 0 0 chr18 42466306 42466343 -43522591 + (TCTCTG)n Simple_repeat Simple_repeat 4 40 0 327 177 0 0 chr18 42466343 42466405 -43522529 + (TA)n Simple_repeat Simple_repeat 2 63 0 23 33 0 0 chr18 42466434 42466464 -43522470 + AT_rich Low_complexity Low_complexity 1 30 0 35 24 0 0 chr18 42466534 42466576 -43522358 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr18 42466804 42466827 -43522107 + AT_rich Low_complexity Low_complexity 1 23 0 1971 128 3 0 chr18 42466834 42467177 -43521757 + AluSx SINE Alu 1 344 0 1864 270 56 24 chr18 42467187 42468045 -43520889 - L1ME1 LINE L1 -18 6217 5239 800 252 29 5 chr18 42468051 42468261 -43520673 - L1ME1 LINE L1 -6148 248 34 1922 162 128 10 chr18 42468663 42469046 -43519888 - MSTA LTR MaLR 0 428 1 377 289 25 8 chr18 42469046 42469167 -43519767 + L2 LINE L2 2213 2335 -979 420 296 30 20 chr18 42469182 42469385 -43519549 + L2 LINE L2 2458 2662 -652 432 344 84 35 chr18 42469398 42469987 -43518947 + L2 LINE L2 2633 3275 -38 1197 276 58 60 chr18 42470168 42470715 -43518219 + MLT1H LTR MaLR 4 549 0 350 327 18 0 chr18 42471091 42471204 -43517730 - L2 LINE L2 0 3313 3199 573 170 7 26 chr18 42472564 42472717 -43516217 + CT-rich Low_complexity Low_complexity 3 152 0 1009 319 75 12 chr18 42473086 42473642 -43515292 + MLT2F LTR ERVL 29 656 -7 2097 222 12 54 chr18 42473663 42474203 -43514731 - Tigger7 DNA MER2_type -7 2480 2 26 30 0 0 chr18 42475047 42475080 -43513854 + AT_rich Low_complexity Low_complexity 1 33 0 239 274 68 14 chr18 42475322 42475395 -43513539 - L2 LINE L2 0 3272 3196 1835 117 49 0 chr18 42475758 42476064 -43512870 - AluSx SINE Alu 0 324 6 234 0 0 0 chr18 42476882 42476908 -43512026 + (CA)n Simple_repeat Simple_repeat 2 27 0 195 42 0 0 chr18 42477093 42477117 -43511817 + (GA)n Simple_repeat Simple_repeat 2 25 0 340 353 64 30 chr18 42478443 42478709 -43510225 - MLT1J LTR MaLR -149 362 88 246 254 85 0 chr18 42478984 42479043 -43509891 + L2 LINE L2 3242 3305 -8 2513 116 8 19 chr18 42479131 42479502 -43509432 + MER1A DNA MER1_type 159 525 -4 8249 184 9 7 chr18 42479505 42481772 -43507162 - L1PA12 LINE L1 -3500 4084 1807 1955 160 0 10 chr18 42481762 42482068 -43506866 - L1PA12 LINE L1 -6740 841 539 * 2391 141 5 2 chr18 42482069 42482466 -43506468 + L1PB1 LINE L1 5746 6143 -8 470 183 219 0 chr18 42482519 42482656 -43506278 + L1MA8 LINE L1 6119 6285 -6 4899 177 11 27 chr18 42482835 42483856 -43505078 + L1MA5 LINE L1 5297 6300 0 850 249 75 88 chr18 42483880 42483928 -43505006 + L1M4 LINE L1 3274 3321 -2825 222 37 0 0 chr18 42483928 42483955 -43504979 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 1481 190 0 32 chr18 42483957 42484236 -43504698 - AluJo SINE Alu -42 270 1 850 249 75 88 chr18 42484236 42484912 -43504022 + L1M4 LINE L1 3322 3992 -2154 3687 259 75 45 chr18 42484977 42488476 -43500458 - L1MD2 LINE L1 -24 6335 2725 534 305 32 11 chr18 42489303 42489490 -43499444 + MIR SINE MIR 63 253 -9 187 377 0 38 chr18 42490600 42490706 -43498228 + MIR SINE MIR 42 143 -65 207 194 0 0 chr18 42493497 42493533 -43495401 + (TATATG)n Simple_repeat Simple_repeat 3 38 0 311 318 71 48 chr18 42494004 42494130 -43494804 + MIR3 SINE MIR 45 173 -35 225 314 25 0 chr18 42496617 42496735 -43492199 + L1ME LINE L1 5709 5829 -292 632 261 25 13 chr18 42496750 42496907 -43492027 + MER8 DNA MER2_type 2 160 -79 317 332 70 57 chr18 42497129 42497427 -43491507 - L1MC/D LINE L1 -2252 5556 5255 657 340 44 8 chr18 42497526 42497776 -43491158 - MIR SINE MIR 0 262 4 577 326 44 14 chr18 42499964 42500196 -43488738 + MIR SINE MIR 21 259 -3 26192 58 2 1 chr18 42501241 42504641 -43484293 - L1P LINE L1 -1429 4717 1316 186 43 0 0 chr18 42506636 42506659 -43482275 + (ATG)n Simple_repeat Simple_repeat 1 23 0 900 360 126 33 chr18 42509011 42510015 -43478919 - L3 LINE CR1 -26 1551 455 3970 161 26 23 chr18 42510093 42511125 -43477809 + L1PB1 LINE L1 4860 5891 -260 1273 55 0 0 chr18 42511137 42511300 -43477634 + L1PA4 LINE L1 5993 6155 0 1668 99 40 4 chr18 42511300 42511614 -43477320 + L1PB1 LINE L1 5878 6200 0 1202 153 22 9 chr18 42511968 42512190 -43476744 - L1MA5A LINE L1 0 6297 6073 216 111 0 0 chr18 42512437 42512473 -43476461 + (CCAA)n Simple_repeat Simple_repeat 4 39 0 440 213 16 8 chr18 42512962 42513084 -43475850 + L1MA4 LINE L1 6172 6294 -6 2140 114 0 25 chr18 42515056 42515373 -43473561 + AluSx SINE Alu 1 309 -3 303 284 55 18 chr18 42516842 42516951 -43471983 - MIR SINE MIR -32 230 118 29 0 0 25 chr18 42517417 42517435 -43471499 + AT_rich Low_complexity Low_complexity 1 18 -21 1863 164 0 0 chr18 42517435 42517722 -43471212 + AluSx SINE Alu 1 287 -25 29 0 0 25 chr18 42517722 42517743 -43471191 + AT_rich Low_complexity Low_complexity 18 39 0 206 337 22 11 chr18 42518025 42518117 -43470817 + L2 LINE L2 3165 3257 -56 216 135 0 0 chr18 42518517 42518554 -43470380 + (TA)n Simple_repeat Simple_repeat 2 38 0 199 303 26 0 chr18 42519988 42520064 -43468870 + MIR SINE MIR 172 249 -13 685 329 40 0 chr18 42520116 42520344 -43468590 + MIR SINE MIR 4 240 -22 24 32 0 0 chr18 42520962 42520993 -43467941 + AT_rich Low_complexity Low_complexity 1 31 0 190 191 71 0 chr18 42521211 42521253 -43467681 + MIR SINE MIR 96 140 -122 1848 164 41 0 chr18 42523143 42523461 -43465473 - MER2 DNA MER2_type 0 345 15 215 374 54 24 chr18 42523516 42523682 -43465252 - L3 LINE CR1 -976 601 431 184 354 62 18 chr18 42523768 42523881 -43465053 - L3 LINE CR1 -1275 302 185 462 272 154 6 chr18 42524165 42524327 -43464607 + MER5A DNA MER1_type 4 189 0 2152 104 3 41 chr18 42524967 42525285 -43463649 - AluSg SINE Alu -4 306 1 68 34 0 0 chr18 42525937 42526026 -43462908 + AT_rich Low_complexity Low_complexity 1 89 0 23 0 0 0 chr18 42526581 42526604 -43462330 + AT_rich Low_complexity Low_complexity 1 23 0 183 42 0 0 chr18 42527515 42527539 -43461395 + (T)n Simple_repeat Simple_repeat 1 24 0 545 356 19 84 chr18 42527590 42528067 -43460867 - L2 LINE L2 0 3272 2827 439 241 82 2 chr18 42528753 42528891 -43460043 - MIR SINE MIR -52 210 60 482 219 8 34 chr18 42529565 42529684 -43459250 + L1MD3 LINE L1 7865 7980 -15 390 289 232 14 chr18 42531333 42531544 -43457390 + MIR SINE MIR 6 262 0 304 363 24 18 chr18 42531894 42532062 -43456872 - L2 LINE L2 -190 3082 2914 270 346 78 39 chr18 42534927 42535178 -43453756 - L2 LINE L2 -277 3036 2779 310 106 0 165 chr18 42535223 42535308 -43453626 - L1PB4 LINE L1 -4 6152 6082 21 57 0 0 chr18 42535772 42535807 -43453127 + AT_rich Low_complexity Low_complexity 1 35 0 223 336 53 15 chr18 42535950 42536081 -43452853 - L2 LINE L2 0 3313 3178 318 329 106 21 chr18 42537196 42537433 -43451501 - L2 LINE L2 -106 3207 2951 1929 145 18 57 chr18 42537449 42537608 -43451326 - THE1C LTR MaLR -3 372 208 216 0 0 0 chr18 42537608 42537632 -43451302 + (GA)n Simple_repeat Simple_repeat 1 24 0 1929 145 18 57 chr18 42537632 42537859 -43451075 - THE1C LTR MaLR -167 208 1 341 312 37 18 chr18 42537949 42538058 -43450876 - MER5A DNA MER1_type 0 178 68 181 258 135 34 chr18 42538127 42538216 -43450718 - L2 LINE L2 -518 2796 2699 2554 119 3 11 chr18 42538222 42538600 -43450334 - THE1C LTR MaLR 0 375 1 4791 93 9 6 chr18 42539889 42540545 -43448389 - PABL_A LTR ERV1 -2 658 1 462 36 0 0 chr18 42540891 42540947 -43447987 + (TG)n Simple_repeat Simple_repeat 2 57 0 25 75 0 0 chr18 42541147 42541200 -43447734 + AT_rich Low_complexity Low_complexity 1 53 0 213 121 0 0 chr18 42541373 42541406 -43447528 + (T)n Simple_repeat Simple_repeat 1 33 0 1720 108 108 4 chr18 42541654 42541946 -43446988 - AluSq SINE Alu 0 319 1 183 364 11 11 chr18 42543563 42543651 -43445283 + L3 LINE CR1 1169 1256 -321 23 0 0 0 chr18 42544179 42544202 -43444732 + AT_rich Low_complexity Low_complexity 1 23 0 2172 93 0 23 chr18 42544625 42544935 -43443999 + AluY SINE Alu 1 303 -8 392 266 54 33 chr18 42545701 42545885 -43443049 + MLT1J2 LTR MaLR 263 450 0 203 250 33 0 chr18 42546669 42546729 -43442205 + (TA)n Simple_repeat Simple_repeat 2 63 0 255 103 0 0 chr18 42546814 42546853 -43442081 + (CA)n Simple_repeat Simple_repeat 2 40 0 225 0 0 0 chr18 42547248 42547273 -43441661 + (CA)n Simple_repeat Simple_repeat 2 26 0 21 0 0 0 chr18 42547700 42547721 -43441213 + AT_rich Low_complexity Low_complexity 1 21 0 1279 251 155 31 chr18 42547725 42548203 -43440731 - MLT1E LTR MaLR -27 566 30 23 54 0 0 chr18 42548525 42548562 -43440372 + AT_rich Low_complexity Low_complexity 1 37 0 225 417 15 52 chr18 42548745 42549016 -43439918 - L2 LINE L2 -338 2976 2716 425 326 42 5 chr18 42549162 42549352 -43439582 + MIR SINE MIR 65 261 -1 1124 216 140 11 chr18 42550485 42550749 -43438185 - AluJo SINE Alu -3 299 2 1144 211 83 40 chr18 42551896 42552223 -43436711 - MER58B DNA MER1_type 0 341 1 32 81 0 0 chr18 42552241 42552315 -43436619 + AT_rich Low_complexity Low_complexity 1 74 0 867 276 59 50 chr18 42554551 42555053 -43433881 + MLT1H1 LTR MaLR 1 553 -2 2382 75 0 25 chr18 42555857 42556176 -43432758 + AluY SINE Alu 1 311 0 680 280 95 50 chr18 42556453 42556740 -43432194 + MLT1G1 LTR MaLR 180 557 -38 778 235 107 0 chr18 42561439 42561626 -43427308 - MER63A DNA MER1_type -3 207 1 378 286 28 4 chr18 42561934 42562051 -43426883 - MIR SINE MIR -62 146 35 32 26 0 0 chr18 42562934 42562973 -43425961 + AT_rich Low_complexity Low_complexity 1 39 0 1545 166 99 81 chr18 42564144 42564566 -43424368 - MSTB1 LTR MaLR 0 432 3 2162 86 3 52 chr18 42565573 42565898 -43423036 + AluY SINE Alu 3 311 0 213 39 0 0 chr18 42566158 42566184 -43422750 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1528 94 0 33 chr18 42566192 42566435 -43422499 + AluSg/x SINE Alu 74 309 0 981 82 0 54 chr18 42566470 42566617 -43422317 - MER85 DNA T2_type 0 139 1 23 0 0 0 chr18 42567022 42567045 -43421889 + AT_rich Low_complexity Low_complexity 1 23 0 188 318 127 73 chr18 42567319 42567429 -43421505 - L2 LINE L2 -1 3312 3197 267 31 0 0 chr18 42567632 42567664 -43421270 + (TTTTC)n Simple_repeat Simple_repeat 4 35 0 2764 139 11 32 chr18 42568575 42569044 -43419890 + LOR1b LTR ERV1 3 461 0 224 282 42 0 chr18 42569681 42569752 -43419182 - L2 LINE L2 -1 3271 3198 185 360 108 7 chr18 42570316 42570455 -43418479 - L3 LINE CR1 -3 1574 1422 200 261 31 15 chr18 42570850 42570915 -43418019 - L2 LINE L2 -6 3266 3201 297 183 0 0 chr18 42571128 42571188 -43417746 + (TATATG)n Simple_repeat Simple_repeat 1 60 0 425 306 14 28 chr18 42573292 42573436 -43415498 + MIR SINE MIR 3 144 -118 390 297 137 33 chr18 42573860 42574072 -43414862 - MIR SINE MIR -14 248 15 2806 13 0 0 chr18 42574162 42574473 -43414461 - AluYa5 SINE Alu 0 311 1 306 304 52 17 chr18 42574712 42574827 -43414107 - MIR SINE MIR -54 208 90 250 374 50 65 chr18 42575067 42575407 -43413527 - L2 LINE L2 -5 3267 2933 405 328 8 32 chr18 42575532 42575657 -43413277 + MIR SINE MIR 20 141 -67 279 313 26 9 chr18 42576869 42576984 -43411950 - HERVL LTR ERVL -3150 2504 2388 180 0 0 0 chr18 42577015 42577035 -43411899 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 249 375 22 13 chr18 42577666 42577898 -43411036 - L2 LINE L2 -212 3060 2827 23 0 0 0 chr18 42578170 42578193 -43410741 + AT_rich Low_complexity Low_complexity 1 23 0 202 159 45 0 chr18 42578528 42578572 -43410362 + GA-rich Low_complexity Low_complexity 4 49 0 180 97 0 0 chr18 42580106 42580137 -43408797 + (A)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr18 42580331 42580353 -43408581 + AT_rich Low_complexity Low_complexity 1 22 0 295 227 15 0 chr18 42581380 42581446 -43407488 + FLAM SINE Alu 63 129 -4 248 216 0 20 chr18 42581600 42581651 -43407283 - Alu SINE Alu -8 294 245 1529 275 72 56 chr18 42582194 42584003 -43404931 + L1MCb LINE L1 615 2639 -4106 376 270 9 51 chr18 42584016 42584231 -43404703 + L1MCb LINE L1 2709 2914 -3650 3592 181 50 5 chr18 42584303 42585076 -43403858 - L1MA5 LINE L1 -2 7360 6553 12676 213 34 15 chr18 42585088 42588726 -43400208 - L1MA5 LINE L1 -777 6431 2796 1649 271 35 41 chr18 42588735 42589270 -43399664 - L1MA5 LINE L1 -6677 532 1 2249 168 36 18 chr18 42589295 42589788 -43399146 - L1MA8 LINE L1 -46 6245 5744 598 283 64 13 chr18 42589790 42590023 -43398911 + L1MCb LINE L1 2908 3152 -3412 1109 239 43 43 chr18 42590028 42590451 -43398483 + L1MD3 LINE L1 6858 7280 -715 432 242 11 0 chr18 42590456 42590551 -43398383 + MLT1F1 LTR MaLR 8 103 -464 2028 221 7 5 chr18 42590557 42591000 -43397934 + L1MD3 LINE L1 7389 7832 -163 1059 257 104 41 chr18 42591076 42591801 -43397133 + L1ME3A LINE L1 5394 6160 -10 3967 213 75 22 chr18 42591892 42592916 -43396018 + Tigger6a DNA MER2_type 1 1078 -5 206 191 0 24 chr18 42593134 42593176 -43395758 + (TA)n Simple_repeat Simple_repeat 1 41 0 183 80 0 0 chr18 42594179 42594204 -43394730 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1815 147 10 45 chr18 42594211 42594525 -43394409 - AluSx SINE Alu -9 303 1 27 0 0 0 chr18 42594604 42594631 -43394303 + AT_rich Low_complexity Low_complexity 1 27 0 1435 207 226 19 chr18 42594878 42595303 -43393631 + MLT2B1 LTR ERVL 3 515 -5 858 283 171 14 chr18 42595722 42596161 -43392773 + MLT1J LTR MaLR 3 510 -1 23 0 0 0 chr18 42597667 42597690 -43391244 + AT_rich Low_complexity Low_complexity 1 23 0 460 312 35 9 chr18 42597832 42598078 -43390856 - L1MC/D LINE L1 -472 5649 5436 330 286 67 82 chr18 42598106 42598581 -43390353 - L1MC/D LINE L1 -815 5331 4864 201 294 29 0 chr18 42598636 42598704 -43390230 - MIR SINE MIR -26 236 167 744 247 154 0 chr18 42598733 42599089 -43389845 - MER63 DNA MER1_type -11 1643 6 294 273 39 19 chr18 42599095 42599249 -43389685 + (TATATG)n Simple_repeat Simple_repeat 4 160 0 750 295 119 16 chr18 42600013 42600325 -43388609 + LTR16C LTR ERVL 144 487 -4 2381 83 0 0 chr18 42600833 42601133 -43387801 - AluSq SINE Alu -13 300 1 1808 162 0 0 chr18 42601148 42601420 -43387514 - AluSx SINE Alu -37 275 4 1431 199 19 41 chr18 42601501 42601818 -43387116 - AluJo SINE Alu 0 312 3 333 306 91 73 chr18 42601952 42602625 -43386309 - L1MC/D LINE L1 -3318 2828 2144 4975 195 26 6 chr18 42602838 42604503 -43384431 - L1MA8 LINE L1 -12 7698 6002 4484 254 48 15 chr18 42604511 42606927 -43382007 - L1MA8 LINE L1 -2607 4958 2462 2350 96 0 0 chr18 42606928 42607229 -43381705 - AluSg SINE Alu -9 301 1 21 0 0 0 chr18 42607307 42607328 -43381606 + AT_rich Low_complexity Low_complexity 1 21 0 356 267 133 0 chr18 42607536 42607671 -43381263 - L1MC/D LINE L1 -2305 5503 5351 264 251 48 24 chr18 42607746 42607913 -43381021 - L1MC/D LINE L1 -847 5299 5129 555 83 0 12 chr18 42608406 42608490 -43380444 - L1PA16 LINE L1 -3 6163 6081 1314 235 34 9 chr18 42608490 42608814 -43380120 + L1 LINE L1 4207 4538 -1608 1100 247 125 10 chr18 42608987 42609291 -43379643 + MER2 DNA MER2_type 7 345 0 411 183 0 0 chr18 42609304 42609386 -43379548 + (CATA)n Simple_repeat Simple_repeat 3 84 0 1573 239 65 33 chr18 42609816 42610448 -43378486 + L1ME1 LINE L1 4615 5266 -880 1288 214 0 48 chr18 42610485 42610774 -43378160 + AluJo SINE Alu 6 280 -32 1163 255 53 57 chr18 42610786 42611292 -43377642 + L1ME1 LINE L1 5319 5822 -344 2109 178 42 82 chr18 42611294 42611890 -43377044 + L1MB8 LINE L1 5605 6176 -2 743 233 33 83 chr18 42611870 42612170 -43376764 + L1ME1 LINE L1 5801 6085 -81 * 189 143 95 24 chr18 42613163 42613205 -43375729 + MIR SINE MIR 120 164 -98 2337 81 0 0 chr18 42613482 42613779 -43375155 - AluY SINE Alu -14 297 1 198 370 59 35 chr18 42613804 42614007 -43374927 + L2 LINE L2 2644 2851 -463 315 342 67 0 chr18 42614316 42614436 -43374498 + L2 LINE L2 3142 3269 -3 326 301 44 29 chr18 42614626 42614762 -43374172 + MIR SINE MIR 49 186 -76 21 0 0 0 chr18 42615730 42615751 -43373183 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr18 42616591 42616613 -43372321 + (TA)n Simple_repeat Simple_repeat 2 23 0 29 42 4 0 chr18 42616683 42616762 -43372172 + AT_rich Low_complexity Low_complexity 1 50 0 185 355 22 58 chr18 42616814 42616952 -43371982 - MER5A DNA MER1_type -56 133 1 4294 187 33 52 chr18 42616991 42617096 -43371838 - L1MA9 LINE L1 -42 6270 6164 329 0 24 0 chr18 42617096 42617137 -43371797 + (TG)n Simple_repeat Simple_repeat 1 42 0 4294 187 33 52 chr18 42617137 42618284 -43370650 - L1MA9 LINE L1 -148 6164 5043 563 247 77 60 chr18 42618328 42618563 -43370371 - MIR SINE MIR -22 240 2 483 138 0 0 chr18 42619606 42619693 -43369241 + (GGA)n Simple_repeat Simple_repeat 3 89 0 555 321 26 21 chr18 42619965 42620158 -43368776 + MER92C LTR ERV1 1 194 -360 353 259 19 0 chr18 42620643 42620751 -43368183 + MER31-int LTR ERV1 1034 1143 -3793 1849 114 7 21 chr18 42621236 42621516 -43367418 - AluSc SINE Alu -10 299 24 1691 187 25 3 chr18 42622027 42622380 -43366554 + MER46B DNA MER2_type 1 236 0 875 232 45 122 chr18 42622448 42622956 -43365978 + MER31-int LTR ERV1 3182 3650 -1286 580 285 134 32 chr18 42623129 42623382 -43365552 + LTR16C LTR ERVL 89 367 -124 1281 173 0 0 chr18 42623386 42623594 -43365340 - MLT1B LTR MaLR 0 390 183 1960 166 7 59 chr18 42623596 42624000 -43364934 + MLT1B LTR MaLR 6 388 -2 336 83 0 0 chr18 42624010 42624058 -43364876 + MADE1 DNA Mariner 33 80 0 1009 201 0 16 chr18 42624058 42624252 -43364682 - MLT1B LTR MaLR -199 191 1 328 337 37 43 chr18 42624372 42624559 -43364375 + L1MEd LINE L1 1072 1257 -4862 235 65 0 0 chr18 42624834 42624865 -43364069 - MLT1J2 LTR MaLR -348 102 72 1659 144 20 63 chr18 42625068 42625416 -43363518 + MER47A DNA MER2_type 9 341 -25 9675 221 44 36 chr18 42626158 42629955 -43358979 + L1M2b LINE L1 16 3959 -3249 7067 191 31 6 chr18 42629951 42632394 -43356540 + L1MA4A LINE L1 3795 6299 -4 * 410 323 86 5 chr18 42632408 42632628 -43356306 + L1M2b LINE L1 3989 4226 -2982 1365 130 58 5 chr18 42632640 42632863 -43356071 + AluSx SINE Alu 1 235 -77 213 39 0 0 chr18 42632873 42632899 -43356035 + (A)n Simple_repeat Simple_repeat 1 26 0 315 180 67 22 chr18 42633151 42633191 -43355743 - MER46A DNA MER2_type -47 189 146 1246 189 104 35 chr18 42633191 42633248 -43355686 + MER46B DNA MER2_type 1 53 -2678 1134 220 95 0 chr18 42633248 42633406 -43355528 - AluJo SINE Alu -3 299 157 200 33 0 33 chr18 42633406 42633436 -43355498 + (TTTTG)n Simple_repeat Simple_repeat 5 33 0 1134 220 95 0 chr18 42633436 42633550 -43355384 - AluJo SINE Alu -145 157 1 1246 189 104 35 chr18 42633550 42633830 -43355104 + MER46B DNA MER2_type 53 236 0 28 48 0 0 chr18 42633830 42633872 -43355062 + AT_rich Low_complexity Low_complexity 1 42 0 8475 213 9 13 chr18 42633995 42635957 -43352977 - L1 LINE L1 -1052 5094 3141 5701 109 27 15 chr18 42635977 42636650 -43352284 + L1PB1 LINE L1 5103 5798 -353 234 0 0 0 chr18 42636650 42636676 -43352258 + (CA)n Simple_repeat Simple_repeat 2 27 0 5701 109 27 15 chr18 42636676 42637034 -43351900 + L1PB1 LINE L1 5798 6150 -1 208 143 0 0 chr18 42637229 42637264 -43351670 + (TA)n Simple_repeat Simple_repeat 1 35 0 476 198 20 0 chr18 42637642 42637743 -43351191 + FLAM_A SINE Alu 33 135 -7 7774 202 18 20 chr18 42638066 42639580 -43349354 - L1PA15 LINE L1 -2 6163 4647 495 0 0 0 chr18 42639580 42639635 -43349299 + (TTTTA)n Simple_repeat Simple_repeat 2 56 0 2456 32 0 0 chr18 42639635 42639917 -43349017 - AluY SINE Alu -29 282 1 7774 202 18 20 chr18 42639917 42640950 -43347984 - L1PA15 LINE L1 -1516 4649 3603 309 296 79 13 chr18 42640951 42641103 -43347831 + L1MC/D LINE L1 5372 5533 -2275 * 3256 265 81 45 chr18 42641102 42643002 -43345932 + L1M2b LINE L1 4264 6329 -879 2090 274 87 14 chr18 42643006 42643531 -43345403 + L1ME1 LINE L1 5330 5930 -236 782 290 18 0 chr18 42643531 42643748 -43345186 - MER58A DNA MER1_type -3 221 1 2090 274 87 14 chr18 42643748 42643993 -43344941 + L1ME1 LINE L1 5930 6156 -10 289 355 27 0 chr18 42644149 42644259 -43344675 - MIR3 SINE MIR -54 154 42 21 36 0 0 chr18 42644828 42644856 -43344078 + AT_rich Low_complexity Low_complexity 1 28 0 706 286 28 9 chr18 42646293 42646506 -43342428 - MIR SINE MIR 0 262 46 486 0 0 0 chr18 42646828 42646882 -43342052 + (CA)n Simple_repeat Simple_repeat 2 55 0 333 253 13 0 chr18 42648329 42648404 -43340530 + MER5A DNA MER1_type 5 80 -109 2185 202 17 7 chr18 42648615 42649035 -43339899 - MSTB LTR MaLR -2 424 1 7721 202 23 21 chr18 42649035 42650683 -43338251 - MSTB-int LTR MaLR 0 1651 1 2137 175 49 12 chr18 42650683 42651094 -43337840 - MSTB LTR MaLR 0 426 1 1079 54 8 0 chr18 42651593 42651722 -43337212 + AluY SINE Alu 1 130 -181 832 320 95 23 chr18 42652311 42652859 -43336075 - L2 LINE L2 -230 3083 2492 856 94 25 19 chr18 42653183 42653343 -43335591 + (GAAA)n Simple_repeat Simple_repeat 4 164 0 263 301 28 14 chr18 42654413 42654556 -43334378 + CT-rich Low_complexity Low_complexity 1 145 0 253 315 11 33 chr18 42655730 42655822 -43333112 + MIR SINE MIR 8 97 -165 2348 59 3 47 chr18 42656663 42656983 -43331951 + AluY SINE Alu 1 306 -5 213 39 0 0 chr18 42657250 42657276 -43331658 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1528 94 0 33 chr18 42657284 42657527 -43331407 + AluSg/x SINE Alu 76 311 0 981 82 0 54 chr18 42657562 42657709 -43331225 - MER85 DNA T2_type 0 139 1 23 0 0 0 chr18 42658335 42658358 -43330576 + AT_rich Low_complexity Low_complexity 1 23 0 460 312 35 9 chr18 42658500 42658746 -43330188 - L1MC/D LINE L1 -472 5649 5436 330 286 67 82 chr18 42658774 42659249 -43329685 - L1MC/D LINE L1 -815 5331 4864 201 294 29 0 chr18 42659304 42659372 -43329562 - MIR SINE MIR -26 236 167 769 245 154 0 chr18 42659401 42659757 -43329177 - MER63 DNA MER1_type -11 1643 6 294 273 39 19 chr18 42659763 42659917 -43329017 + (TATATG)n Simple_repeat Simple_repeat 4 160 0 750 295 119 16 chr18 42660681 42660993 -43327941 + LTR16C LTR ERVL 144 487 -4 2411 80 0 0 chr18 42661501 42661801 -43327133 - AluSq SINE Alu -13 300 1 1808 162 0 0 chr18 42661816 42662088 -43326846 - AluSx SINE Alu -37 275 4 1417 202 19 41 chr18 42662169 42662486 -43326448 - AluJo SINE Alu 0 312 3 319 308 91 73 chr18 42662620 42663293 -43325641 - L1M4 LINE L1 -3318 2828 2144 1770 185 22 5 chr18 42663506 42663873 -43325061 - L1MA8 LINE L1 -12 6279 5907 1886 139 0 4 chr18 42664432 42664713 -43324221 - AluSc SINE Alu -29 280 1 209 214 57 0 chr18 42667788 42667858 -43321076 + (TAGA)n Simple_repeat Simple_repeat 4 77 0 442 216 60 75 chr18 42668409 42668608 -43320326 + ORSL DNA AcHobo 80 275 0 2721 3 0 10 chr18 42670273 42670577 -43318357 - AluYa5 SINE Alu -10 301 1 338 61 20 0 chr18 42670710 42670759 -43318175 + (CA)n Simple_repeat Simple_repeat 2 51 0 202 302 19 0 chr18 42670770 42670823 -43318111 + MIR SINE MIR 27 80 -182 245 350 93 49 chr18 42671289 42671717 -43317217 - L2 LINE L2 -9 3304 2858 1214 128 10 0 chr18 42671743 42671947 -43316987 + L1MA1 LINE L1 6097 6302 0 1416 186 9 78 chr18 42672058 42672247 -43316687 - L1MB4 LINE L1 -25 6155 5999 1510 185 94 21 chr18 42672247 42672587 -43316347 - MLT1A1 LTR MaLR 0 365 1 1416 186 9 78 chr18 42672587 42672742 -43316192 - L1MB4 LINE L1 -181 5999 5835 242 323 85 16 chr18 42672752 42672941 -43315993 - L2 LINE L2 -582 2732 2531 519 230 67 7 chr18 42675442 42675577 -43313357 + MER5B DNA MER1_type 7 149 -29 241 194 290 21 chr18 42675629 42675722 -43313212 + MER5A DNA MER1_type 35 152 -37 223 172 35 35 chr18 42676055 42676113 -43312821 - L2 LINE L2 -13 3259 3202 1279 224 21 67 chr18 42677826 42678215 -43310719 - MLT1A2 LTR MaLR 0 374 4 2192 122 0 13 chr18 42678597 42678908 -43310026 - AluSq SINE Alu -6 307 1 1550 248 22 17 chr18 42679276 42679684 -43309250 - LTR52 LTR ERVL -11 410 1 208 135 0 0 chr18 42680006 42680043 -43308891 + (T)n Simple_repeat Simple_repeat 1 37 0 291 54 0 0 chr18 42681465 42681502 -43307432 + (CA)n Simple_repeat Simple_repeat 2 38 0 186 43 0 0 chr18 42682718 42682741 -43306193 + (TTA)n Simple_repeat Simple_repeat 2 24 0 305 354 29 24 chr18 42683176 42683382 -43305552 + L1M4 LINE L1 2960 3166 -2980 21 36 0 0 chr18 42683437 42683465 -43305469 + AT_rich Low_complexity Low_complexity 1 28 0 202 71 24 24 chr18 42683582 42683624 -43305310 + (TAAAAA)n Simple_repeat Simple_repeat 5 46 0 2000 223 55 42 chr18 42684011 42684553 -43304381 - MER44D DNA MER2_type 0 605 2 4231 159 65 22 chr18 42685656 42686136 -43302798 + Tigger1 DNA MER2_type 1 530 -1888 1370 204 10 52 chr18 42686136 42686445 -43302489 + AluJo SINE Alu 1 296 -16 4231 159 65 22 chr18 42686445 42686745 -43302189 + Tigger1 DNA MER2_type 530 815 -1603 * 7821 147 27 30 chr18 42686741 42688127 -43300807 + Tigger1 DNA MER2_type 1037 2418 0 23 33 0 0 chr18 42688188 42688218 -43300716 + AT_rich Low_complexity Low_complexity 1 30 0 1592 131 37 64 chr18 42689425 42689753 -43299181 - L1MA5A LINE L1 0 6297 5979 1488 256 86 22 chr18 42690147 42690490 -43298444 + MER119 DNA MER1_type 12 398 -185 2163 122 0 0 chr18 42690490 42690794 -43298140 + AluSx SINE Alu 1 304 -8 1488 256 86 22 chr18 42690794 42690949 -43297985 + MER119 DNA MER1_type 398 542 -41 24 0 0 0 chr18 42692791 42692815 -43296119 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr18 42693417 42693440 -43295494 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 254 344 0 10 chr18 42693452 42693548 -43295386 + CT-rich Low_complexity Low_complexity 4 98 0 23 0 0 0 chr18 42694012 42694035 -43294899 + AT_rich Low_complexity Low_complexity 1 23 0 1338 273 111 42 chr18 42696118 42697606 -43291328 + L1ME LINE L1 31 1600 -4480 212 333 39 16 chr18 42697645 42697774 -43291160 + MIR SINE MIR 120 251 -11 267 254 0 0 chr18 42697776 42697843 -43291091 + (CAT)n Simple_repeat Simple_repeat 2 68 0 1686 239 75 51 chr18 42698036 42698665 -43290269 + LTR9B LTR ERV1 1 644 0 5224 140 24 33 chr18 42699565 42700432 -43288502 + L1PB3 LINE L1 4935 5808 -346 405 0 0 0 chr18 42700432 42700477 -43288457 + (CA)n Simple_repeat Simple_repeat 2 46 0 5224 140 24 33 chr18 42700477 42700499 -43288435 + L1PB3 LINE L1 5808 5829 -325 182 36 0 36 chr18 42700499 42700527 -43288407 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5224 140 24 33 chr18 42700527 42700850 -43288084 + L1PB3 LINE L1 5829 6151 -3 1042 275 41 7 chr18 42702016 42702311 -43286623 - MSTB2 LTR MaLR 0 457 153 2574 106 22 0 chr18 42702325 42702692 -43286242 - THE1C LTR MaLR 0 375 1 9629 133 45 8 chr18 42702692 42704216 -43284718 - THE1C-int LTR MaLR 0 1580 1 2418 108 8 16 chr18 42704216 42704594 -43284340 - THE1C LTR MaLR 0 375 1 368 138 35 164 chr18 42704594 42704659 -43284275 - MSTB2 LTR MaLR -327 101 56 2116 110 7 3 chr18 42704659 42704960 -43283974 - AluSq SINE Alu 0 313 12 368 138 35 164 chr18 42704960 42705010 -43283924 - MSTB2 LTR MaLR -372 56 1 604 343 146 29 chr18 42705089 42705585 -43283349 + L2 LINE L2 2435 3056 -257 251 67 44 0 chr18 42705585 42705630 -43283304 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 604 343 146 29 chr18 42705630 42705913 -43283021 + L2 LINE L2 3056 3304 -9 3958 54 0 0 chr18 42706013 42706497 -43282437 - MER11C LTR ERVK -587 484 1 198 362 141 25 chr18 42706557 42706833 -43282101 + L2 LINE L2 2646 2949 -323 3842 112 11 0 chr18 42706934 42707490 -43281444 + HSMAR2 DNA Mariner 740 1301 -1 1861 127 85 25 chr18 42708560 42708914 -43280020 - THE1C LTR MaLR 0 375 1 453 227 106 8 chr18 42709349 42709481 -43279453 + MER103 DNA DNA 2 146 -20 599 314 64 9 chr18 42710788 42711140 -43277794 + HAL1b LINE L1 332 611 -737 2217 96 14 0 chr18 42711334 42711625 -43277309 + AluY SINE Alu 1 295 -16 9230 73 10 17 chr18 42711900 42713233 -43275701 + L1P LINE L1 663 1985 -4161 797 277 35 13 chr18 42713706 42713937 -43274997 - MIR SINE MIR 0 262 27 353 346 101 0 chr18 42714032 42714249 -43274685 + MIR SINE MIR 18 256 -6 977 207 5 14 chr18 42714254 42714462 -43274472 + L1MA9 LINE L1 5828 6033 -279 807 269 50 50 chr18 42715151 42715508 -43273426 + LTR33 LTR ERVL 1 357 -164 1093 245 13 76 chr18 42715510 42715893 -43273041 + MER74A LTR ERVL 1 359 -199 9428 41 1 4 chr18 42715993 42717157 -43271777 + HERVK11D LTR ERVK 4161 5320 -2432 5807 60 0 1 chr18 42717151 42717881 -43271053 + HERVK11D LTR ERVK 5711 6439 -1313 * 675 219 40 3 chr18 42717992 42718181 -43270753 + MLT2E LTR ERVL 20 222 -441 358 328 15 30 chr18 42718303 42718501 -43270433 + MLT2F LTR ERVL 441 635 -28 425 241 83 23 chr18 42718605 42718663 -43270271 + MIR SINE MIR 88 141 -121 1531 125 0 17 chr18 42718663 42718903 -43270031 - MER46A DNA MER2_type 0 236 1 425 241 83 23 chr18 42718903 42718977 -43269957 + MIR SINE MIR 141 228 -34 187 318 0 0 chr18 42719396 42719440 -43269494 + MIR3 SINE MIR 111 154 -54 2259 113 33 30 chr18 42720420 42720782 -43268152 - THE1B LTR MaLR -1 363 1 400 239 43 34 chr18 42720783 42720900 -43268034 - LTR16C LTR ERVL -9 482 365 2554 48 0 0 chr18 42721328 42721622 -43267312 - AluY SINE Alu -17 294 1 3231 141 31 7 chr18 42721666 42722207 -43266727 + MER41C LTR ERV1 1 554 0 226 197 15 30 chr18 42722526 42722592 -43266342 + MLT1J2 LTR MaLR 71 135 -315 196 303 0 66 chr18 42723005 42723081 -43265853 + L2 LINE L2 3243 3313 0 501 309 122 35 chr18 42724399 42724851 -43264083 + LTR33 LTR ERVL 1 521 0 302 375 75 19 chr18 42724907 42725067 -43263867 + MER91A DNA MER1_type 28 196 0 281 308 96 26 chr18 42727185 42727341 -43261593 - MIR SINE MIR -6 256 90 326 272 49 12 chr18 42727377 42727539 -43261395 + L1M4 LINE L1 15 182 -6360 2468 221 50 102 chr18 42727603 42728391 -43260543 + L1M4 LINE L1 4366 5193 -1451 2179 94 3 19 chr18 42728391 42728772 -43260162 - AluY SINE Alu 0 311 4 2468 221 50 102 chr18 42728772 42728788 -43260146 + L1M4 LINE L1 5193 5208 -1436 1002 114 11 11 chr18 42728788 42728963 -43259971 + (TTTC)n Simple_repeat Simple_repeat 2 176 0 2468 221 50 102 chr18 42728963 42729260 -43259674 + L1M4 LINE L1 5208 5411 -1233 852 283 38 16 chr18 42729287 42729605 -43259329 + L1MB7 LINE L1 5860 6184 0 238 309 123 6 chr18 42729612 42729774 -43259160 - MIR SINE MIR -8 254 74 183 42 0 0 chr18 42730285 42730309 -43258625 + (CA)n Simple_repeat Simple_repeat 1 24 0 360 75 15 30 chr18 42730555 42730622 -43258312 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 312 293 0 12 chr18 42731586 42731668 -43257266 + MER5A DNA MER1_type 11 91 -98 246 260 39 13 chr18 42731609 42731686 -43257248 - MER5A DNA MER1_type -22 167 89 * 601 191 8 8 chr18 42731756 42731882 -43257052 + FLAM_C SINE Alu 16 141 -2 197 283 54 43 chr18 42732165 42732257 -43256677 + MIR SINE MIR 49 141 -121 1974 67 0 8 chr18 42732489 42732744 -43256190 - AluY SINE Alu 0 311 59 22 94 0 0 chr18 42734083 42734147 -43254787 + AT_rich Low_complexity Low_complexity 1 64 0 198 128 0 0 chr18 42734608 42734647 -43254287 + (A)n Simple_repeat Simple_repeat 1 39 0 615 230 37 56 chr18 42737031 42737192 -43251742 + LTR35 LTR ERV1 461 618 0 211 245 43 85 chr18 42737662 42737756 -43251178 + MIR SINE MIR 35 124 -84 501 250 52 35 chr18 42738965 42739137 -43249797 + MER5B DNA MER1_type 4 178 0 26 30 0 0 chr18 42740735 42740768 -43248166 + AT_rich Low_complexity Low_complexity 1 33 0 551 311 77 6 chr18 42742233 42742621 -43246313 - LTR33A LTR ERVL -5 518 67 204 40 0 0 chr18 42745912 42745937 -43242997 + (GA)n Simple_repeat Simple_repeat 2 26 0 23 54 0 0 chr18 42746433 42746470 -43242464 + AT_rich Low_complexity Low_complexity 1 37 0 480 317 75 25 chr18 42747000 42747240 -43241694 + MIR SINE MIR 11 262 0 246 224 0 0 chr18 42748745 42748794 -43240140 + (TG)n Simple_repeat Simple_repeat 2 50 0 1830 182 10 0 chr18 42748833 42749130 -43239804 - AluJo SINE Alu -12 300 1 231 61 0 0 chr18 42749517 42749550 -43239384 + (A)n Simple_repeat Simple_repeat 1 33 0 665 253 55 22 chr18 42751349 42751531 -43237403 + MIR SINE MIR 50 237 -25 257 106 0 85 chr18 42751544 42751591 -43237343 - MLT2A2 LTR ERVL 0 453 411 268 242 15 0 chr18 42751591 42751657 -43237277 + (CATATA)n Simple_repeat Simple_repeat 5 71 0 2825 92 32 2 chr18 42751657 42752057 -43236877 - MLT2A2 LTR ERVL -40 413 2 1648 175 3 29 chr18 42752261 42752737 -43236197 + AluJb SINE Alu 12 479 0 811 101 30 30 chr18 42752569 42752784 -43236150 + GA-rich Low_complexity Low_complexity 1 215 0 1612 203 100 44 chr18 42752910 42753388 -43235546 - MLT1D LTR MaLR 0 505 1 2392 8 0 0 chr18 42753862 42754121 -43234813 + AluYa5 SINE Alu 46 304 -7 255 266 51 0 chr18 42755264 42755343 -43233591 + MIR SINE MIR 125 207 -55 1031 96 6 13 chr18 42755574 42755731 -43233203 + AluSg/x SINE Alu 156 311 -1 247 250 0 0 chr18 42755989 42756041 -43232893 + GA-rich Low_complexity Low_complexity 2 53 0 282 277 44 53 chr18 42756167 42756281 -43232653 - MIR SINE MIR -91 117 4 343 340 92 55 chr18 42756464 42757081 -43231853 - L1M4 LINE L1 -977 5169 4530 364 312 83 75 chr18 42757195 42757567 -43231367 - L1M4 LINE L1 -1817 4329 3955 867 120 14 21 chr18 42757581 42757723 -43231211 + LTR12 LTR ERV1 69 209 -505 * 1417 211 3 248 chr18 42757722 42758311 -43230623 - LTR12 LTR ERV1 -269 445 1 22 0 0 0 chr18 42758419 42758441 -43230493 + AT_rich Low_complexity Low_complexity 1 22 0 462 310 123 25 chr18 42759335 42759538 -43229396 + LTR16C LTR ERVL 98 320 -171 333 253 51 0 chr18 42759582 42759661 -43229273 + LTR16C LTR ERVL 409 491 0 22 0 0 0 chr18 42760088 42760110 -43228824 + AT_rich Low_complexity Low_complexity 1 22 0 2229 145 22 6 chr18 42760639 42760997 -43227937 - THE1B LTR MaLR 0 364 1 225 0 0 91 chr18 42761711 42761755 -43227179 + (TAAAG)n Simple_repeat Simple_repeat 2 41 0 191 378 94 8 chr18 42762506 42762633 -43226301 + MIR SINE MIR 58 195 -67 678 308 72 11 chr18 42763936 42764199 -43224735 - L3 LINE CR1 -2 1575 1297 186 133 0 0 chr18 42765157 42765187 -43223747 + (TG)n Simple_repeat Simple_repeat 2 31 0 422 189 9 0 chr18 42765394 42765505 -43223429 + (TA)n Simple_repeat Simple_repeat 1 112 0 193 355 171 0 chr18 42765884 42766036 -43222898 - MER5B DNA MER1_type 0 178 1 26 0 0 0 chr18 42766544 42766570 -43222364 + AT_rich Low_complexity Low_complexity 1 26 0 2057 217 50 16 chr18 42767950 42768095 -43220839 - L1MA10 LINE L1 -1 6333 6194 192 77 0 0 chr18 42768095 42768121 -43220813 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2057 217 50 16 chr18 42768121 42768519 -43220415 - L1MA10 LINE L1 -140 6194 5772 621 225 8 0 chr18 42768517 42768637 -43220297 + L1MA10 LINE L1 5622 5742 -592 * 207 269 0 0 chr18 42768906 42768958 -43219976 - L2 LINE L2 -1 3312 3261 404 95 73 0 chr18 42769278 42769415 -43219519 + (TA)n Simple_repeat Simple_repeat 2 148 0 322 239 17 26 chr18 42770803 42770920 -43218014 + (TA)n Simple_repeat Simple_repeat 2 117 0 269 290 157 60 chr18 42771291 42771576 -43217358 + MLT1J LTR MaLR 1 279 -167 387 73 0 0 chr18 42772529 42772584 -43216350 + (CA)n Simple_repeat Simple_repeat 1 55 0 230 284 125 77 chr18 42772725 42772933 -43216001 - L2 LINE L2 -527 2787 2570 189 74 0 0 chr18 42773646 42773673 -43215261 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 322 184 11 11 chr18 42774592 42774679 -43214255 + (TA)n Simple_repeat Simple_repeat 1 87 0 22 70 0 0 chr18 42775219 42775262 -43213672 + AT_rich Low_complexity Low_complexity 1 43 0 191 167 0 21 chr18 42776044 42776092 -43212842 + GA-rich Low_complexity Low_complexity 1 47 0 4771 147 52 0 chr18 42778257 42780070 -43208864 + L1PA16 LINE L1 4299 6157 -9 310 326 72 28 chr18 42781055 42781918 -43207016 + L1M4 LINE L1 2638 3538 -2608 22 56 0 0 chr18 42782623 42782659 -43206275 + AT_rich Low_complexity Low_complexity 1 36 0 336 48 0 0 chr18 42782659 42782701 -43206233 + (CA)n Simple_repeat Simple_repeat 2 43 0 1446 272 62 56 chr18 42782712 42783370 -43205564 + MLT2F LTR ERVL 1 662 -1 37 62 0 0 chr18 42783672 42783737 -43205197 + AT_rich Low_complexity Low_complexity 1 65 0 3290 138 65 97 chr18 42785464 42786275 -43202659 - LTR1 LTR ERV1 0 785 1 29 28 0 0 chr18 42786389 42786425 -43202509 + AT_rich Low_complexity Low_complexity 1 36 0 263 148 0 16 chr18 42787665 42787726 -43201208 + (TA)n Simple_repeat Simple_repeat 1 60 0 1988 130 62 25 chr18 42788524 42788879 -43200055 + THE1C LTR MaLR 1 368 -7 218 390 64 0 chr18 42788931 42789072 -43199862 + MIR SINE MIR 22 171 -91 300 298 18 26 chr18 42789331 42789445 -43199489 + MER67D LTR ERV1 334 446 -68 358 309 44 15 chr18 42791432 42791568 -43197366 + L3 LINE CR1 1184 1323 -254 252 250 16 0 chr18 42791892 42791956 -43196978 + CT-rich Low_complexity Low_complexity 2 66 0 22 70 0 0 chr18 42792089 42792132 -43196802 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr18 42792500 42792523 -43196411 + AT_rich Low_complexity Low_complexity 1 23 0 673 103 112 0 chr18 42792552 42792659 -43196275 + L1PA7 LINE L1 6033 6151 -3 211 293 91 40 chr18 42796037 42796136 -43192798 + L2 LINE L2 3169 3272 0 214 269 93 46 chr18 42796550 42796658 -43192276 - L3 LINE CR1 -13 1564 1452 302 294 116 58 chr18 42797129 42797405 -43191529 + MER102a DNA MER1_type 28 319 -11 22 56 0 0 chr18 42798944 42798980 -43189954 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr18 42799153 42799181 -43189753 + AT_rich Low_complexity Low_complexity 1 28 0 208 304 0 0 chr18 42799181 42799237 -43189697 - L3b LINE CR1 -1 1582 1527 * 438 347 201 37 chr18 42799236 42800356 -43188578 + L2 LINE L2 639 1574 -1740 2153 118 0 0 chr18 42800356 42800653 -43188281 - AluSg SINE Alu -9 301 5 438 347 201 37 chr18 42800653 42801355 -43187579 + L2 LINE L2 1574 2760 -554 479 349 110 33 chr18 42802080 42802598 -43186336 + HAL1 LINE L1 323 880 -1627 211 385 0 11 chr18 42802737 42802828 -43186106 + MIR SINE MIR 16 105 -157 294 227 68 76 chr18 42803534 42803666 -43185268 + L1MC5 LINE L1 7798 7928 -33 1395 256 68 54 chr18 42803969 42804731 -43184203 - L1M4 LINE L1 -1065 5081 4309 811 249 33 19 chr18 42804739 42805110 -43183824 - MLT1E2 LTR MaLR -1 623 206 379 230 52 106 chr18 42805110 42805274 -43183660 - MLT1E3 LTR MaLR -271 234 110 2078 98 7 7 chr18 42805274 42805580 -43183354 + AluSg1 SINE Alu 1 306 -3 379 230 52 106 chr18 42805580 42805685 -43183249 - MLT1E3 LTR MaLR -395 110 1 24 32 0 0 chr18 42805737 42805768 -43183166 + AT_rich Low_complexity Low_complexity 1 31 0 1631 279 71 26 chr18 42805911 42807032 -43181902 - L1M4 LINE L1 -2084 4062 2891 462 297 65 79 chr18 42807144 42807575 -43181359 + L1MDa LINE L1 14 438 -6102 303 271 0 29 chr18 42807772 42807846 -43181088 + L1MDa LINE L1 588 968 -5572 276 321 68 41 chr18 42807924 42808145 -43180789 + L2 LINE L2 3006 3232 -81 617 333 12 24 chr18 42808303 42808549 -43180385 + MLT1I LTR MaLR 161 403 -6 31 26 0 0 chr18 42808555 42808593 -43180341 + AT_rich Low_complexity Low_complexity 1 38 0 192 379 23 8 chr18 42809550 42809682 -43179252 + L2 LINE L2 3179 3312 -1 258 290 14 0 chr18 42812498 42812567 -43176367 + CT-rich Low_complexity Low_complexity 2 71 0 322 289 0 0 chr18 42813039 42813122 -43175812 + MIR SINE MIR 146 228 -34 250 331 60 26 chr18 42813179 42813335 -43175599 - MIR SINE MIR -64 144 30 446 317 34 38 chr18 42813735 42814183 -43174751 - L1M4 LINE L1 -1320 4826 4381 21 36 0 0 chr18 42814189 42814217 -43174717 + AT_rich Low_complexity Low_complexity 1 28 0 335 165 31 62 chr18 42814277 42814374 -43174560 - L1ME3 LINE L1 -24 6138 6045 489 73 0 0 chr18 42814374 42814442 -43174492 - AluJ/FRAM SINE Alu -14 298 231 1354 298 51 38 chr18 42814876 42815858 -43173076 - L1M4 LINE L1 -2161 3985 2991 1899 253 52 80 chr18 42815908 42816203 -43172731 + L1ME1 LINE L1 5127 5429 -737 2072 84 47 0 chr18 42816203 42816478 -43172456 + AluSx SINE Alu 2 289 -23 1899 253 52 80 chr18 42816478 42817184 -43171750 + L1ME1 LINE L1 5429 6101 -65 961 305 48 10 chr18 42817628 42817920 -43171014 + MLT2E LTR ERVL 21 323 -305 12251 150 42 29 chr18 42817923 42820209 -43168725 + Tigger1 DNA MER2_type 1 2316 -102 2215 109 32 35 chr18 42820210 42820586 -43168348 + THE1C LTR MaLR 1 375 0 5561 131 122 7 chr18 42820587 42821967 -43166967 + THE1C-int LTR MaLR 2 1580 0 2297 136 11 8 chr18 42821967 42822341 -43166593 + THE1C LTR MaLR 1 375 0 400 171 207 0 chr18 42822341 42822423 -43166511 + Tigger1 DNA MER2_type 2320 2418 0 373 284 54 0 chr18 42822502 42822650 -43166284 + MLT2E LTR ERVL 471 626 -2 189 103 51 26 chr18 42823350 42823389 -43165545 - MER5C DNA MER1_type -206 118 79 244 351 26 0 chr18 42823809 42823886 -43165048 + L2 LINE L2 3156 3234 -38 315 307 39 26 chr18 42824211 42824364 -43164570 - MLT1H LTR MaLR -6 543 389 4999 123 12 5 chr18 42824414 42825193 -43163741 - L1PA13 LINE L1 -8 6155 5372 6723 90 4 0 chr18 42825217 42826440 -43162494 + L1PA8 LINE L1 4950 6178 0 257 0 0 0 chr18 42826456 42826486 -43162448 + L1P LINE L1 5327 5356 -800 604 273 82 28 chr18 42826507 42826752 -43162182 - MLT1H LTR MaLR -251 298 1 381 43 0 0 chr18 42826830 42826877 -43162057 + (CA)n Simple_repeat Simple_repeat 2 48 0 436 297 103 0 chr18 42828396 42828561 -43160373 + MIR SINE MIR 81 262 0 387 317 49 0 chr18 42829327 42829469 -43159465 + MIR SINE MIR 41 189 -73 276 53 0 0 chr18 42829472 42829510 -43159424 + (CA)n Simple_repeat Simple_repeat 1 38 0 201 186 0 23 chr18 42829927 42829970 -43158964 + A-rich Low_complexity Low_complexity 3 44 0 549 274 104 18 chr18 42830538 42830702 -43158232 + MER5A DNA MER1_type 12 189 0 832 237 11 0 chr18 42830810 42830996 -43157938 + MER5A DNA MER1_type 1 188 -1 827 223 107 103 chr18 42831527 42832030 -43156904 + MLT1D LTR MaLR 1 505 0 29 0 0 0 chr18 42832405 42832434 -43156500 + AT_rich Low_complexity Low_complexity 1 29 0 816 235 118 76 chr18 42832584 42833188 -43155746 - Charlie2 DNA MER1_type -6 2856 2228 290 304 22 109 chr18 42833281 42833511 -43155423 - MLT1I LTR MaLR -2 407 198 365 323 114 30 chr18 42833752 42833953 -43154981 - Charlie2 DNA MER1_type -2534 248 31 212 57 0 29 chr18 42834185 42834220 -43154714 + (GA)n Simple_repeat Simple_repeat 1 34 0 267 125 42 0 chr18 42834243 42834315 -43154619 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 197 335 100 40 chr18 42835991 42836191 -43152743 + L2 LINE L2 3102 3313 0 189 277 84 60 chr18 42836594 42836677 -43152257 + MER5A DNA MER1_type 87 171 -18 1712 79 79 0 chr18 42836756 42837010 -43151924 - L1MA1 LINE L1 -4 6298 6025 1661 266 36 4 chr18 42837310 42837865 -43151069 - MLT1E2 LTR MaLR -9 617 3 30 0 0 0 chr18 42838872 42838902 -43150032 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr18 42838955 42838977 -43149957 + AT_rich Low_complexity Low_complexity 1 22 0 1350 245 19 63 chr18 42839109 42839441 -43149493 - MSTD LTR MaLR -2 394 82 2268 89 17 0 chr18 42839441 42839734 -43149200 + AluSg SINE Alu 3 300 -10 1350 245 19 63 chr18 42839734 42839813 -43149121 - MSTD LTR MaLR -314 82 1 1449 305 59 24 chr18 42839831 42840546 -43148388 - HsTC2a DNA Tc2 -4 740 1 31 82 0 0 chr18 42840866 42840939 -43147995 + AT_rich Low_complexity Low_complexity 1 73 0 1574 258 150 28 chr18 42842151 42842286 -43146648 - L1MC4 LINE L1 -6 8036 7919 222 91 0 0 chr18 42842286 42842319 -43146615 + (TG)n Simple_repeat Simple_repeat 2 34 0 1574 258 150 28 chr18 42842319 42843025 -43145909 - L1MC4 LINE L1 -123 7919 7048 180 77 0 0 chr18 42843025 42843051 -43145883 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 1574 258 150 28 chr18 42843051 42843220 -43145714 - L1MC4 LINE L1 -994 7048 6901 8054 224 53 25 chr18 42843382 42845004 -43143930 + L1MA8 LINE L1 3419 5133 -2432 234 0 0 0 chr18 42845004 42845030 -43143904 + (CAA)n Simple_repeat Simple_repeat 2 27 0 8054 224 53 25 chr18 42845030 42845868 -43143066 + L1MA8 LINE L1 5133 5946 -1619 4367 200 32 9 chr18 42845880 42847052 -43141882 + L1MA8 LINE L1 6481 7681 -29 861 270 50 28 chr18 42847277 42847677 -43141257 - L1MEc LINE L1 -1676 4539 4131 1207 324 48 9 chr18 42847679 42848204 -43140730 - MLT1G LTR MaLR 0 590 46 882 288 119 8 chr18 42848268 42848754 -43140180 - L1MEc LINE L1 -2110 4105 3566 1619 181 3 85 chr18 42848758 42849122 -43139812 - MER7A DNA MER2_type 0 346 15 897 287 35 10 chr18 42849124 42849528 -43139406 - L1MEc LINE L1 -3142 3073 2660 6438 100 2 0 chr18 42849606 42850564 -43138370 + L1P LINE L1 4457 5416 -755 385 253 65 7 chr18 42850539 42850693 -43138241 - L1MEc LINE L1 -3651 2564 2402 * 747 240 29 79 chr18 42850703 42850982 -43137952 + MLT1D LTR MaLR 1 265 -240 559 221 0 16 chr18 42850971 42851093 -43137841 + MLT1D LTR MaLR 380 499 -6 * 231 301 98 6 chr18 42851232 42851415 -43137519 - L1MEc LINE L1 -4112 2284 2085 6616 64 17 7 chr18 42851420 42852492 -43136442 - L1PA8 LINE L1 -1 6171 5114 766 303 53 70 chr18 42852660 42853433 -43135501 - L1MEc LINE L1 -5077 1128 369 567 366 89 21 chr18 42854229 42854699 -43134235 + L2 LINE L2 2213 2714 -600 23 68 0 0 chr18 42854734 42854778 -43134156 + AT_rich Low_complexity Low_complexity 1 44 0 185 348 112 54 chr18 42854778 42855002 -43133932 + L2 LINE L2 2736 2972 -342 836 126 0 7 chr18 42855030 42855165 -43133769 - L1MA2 LINE L1 0 6304 6171 1937 144 3 19 chr18 42855191 42855503 -43133431 - AluSx SINE Alu -1 311 5 316 311 37 94 chr18 42855531 42855830 -43133104 + L2 LINE L2 3003 3284 -29 274 266 16 0 chr18 42856047 42856175 -43132759 + (TA)n Simple_repeat Simple_repeat 1 130 0 2028 130 0 0 chr18 42856433 42856748 -43132186 - AluSq SINE Alu 0 315 1 1942 63 0 4 chr18 42858305 42858560 -43130374 - L1PA5 LINE L1 0 6154 5901 234 303 50 30 chr18 42861525 42861624 -43127310 - MIR SINE MIR -70 138 38 711 328 81 50 chr18 42861694 42862501 -43126433 - L2 LINE L2 -1 3312 2479 189 74 0 0 chr18 42862830 42862857 -43126077 + (TC)n Simple_repeat Simple_repeat 2 28 0 357 321 38 0 chr18 42863306 42863437 -43125497 + L2 LINE L2 3178 3313 0 273 29 0 0 chr18 42864151 42864185 -43124749 + (CA)n Simple_repeat Simple_repeat 2 35 0 23 0 0 0 chr18 42864209 42864232 -43124702 + AT_rich Low_complexity Low_complexity 1 23 0 339 130 0 0 chr18 42866574 42866628 -43122306 + (TG)n Simple_repeat Simple_repeat 1 54 0 1940 137 0 13 chr18 42866682 42866982 -43121952 - AluSx SINE Alu 0 312 17 426 20 0 0 chr18 42867022 42867073 -43121861 + (CA)n Simple_repeat Simple_repeat 2 52 0 1999 229 36 44 chr18 42867957 42868590 -43120344 + L1MC4a LINE L1 6921 7548 -260 326 87 0 0 chr18 42868609 42868655 -43120279 + MADE1 DNA Mariner 33 78 -2 541 207 28 76 chr18 42868673 42868924 -43120010 + L1MD3 LINE L1 7755 7993 -2 1737 278 49 26 chr18 42870173 42870745 -43118189 - MER89-int LTR ERV1 -1750 5051 4467 6643 78 10 12 chr18 42870838 42872211 -43116723 - L1PA8 LINE L1 0 6172 4806 333 311 134 5 chr18 42874979 42875141 -43113793 + MIR SINE MIR 6 202 -60 450 0 0 0 chr18 42875141 42875191 -43113743 + (TA)n Simple_repeat Simple_repeat 1 50 0 333 311 134 5 chr18 42875191 42875237 -43113697 + MIR SINE MIR 202 241 -21 355 317 30 18 chr18 42875246 42875413 -43113521 + MLT1I LTR MaLR 10 178 -231 221 208 0 19 chr18 42876419 42876472 -43112462 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 209 245 57 0 chr18 42876975 42877028 -43111906 - MIR SINE MIR -113 149 94 1129 260 99 25 chr18 42878955 42879390 -43109544 + MLT1C LTR MaLR 1 467 0 490 251 126 66 chr18 42879688 42880121 -43108813 - LTR33A LTR ERVL -23 500 1 249 269 0 0 chr18 42880178 42880230 -43108704 - L2 LINE L2 0 3272 3221 212 151 9 57 chr18 42880249 42880355 -43108579 + (TA)n Simple_repeat Simple_repeat 1 101 0 693 334 66 33 chr18 42880517 42880639 -43108295 - L2 LINE L2 -253 3060 2944 1566 247 53 59 chr18 42880639 42881117 -43107817 + MLT2B1 LTR ERVL 1 477 -43 429 20 0 0 chr18 42881117 42881167 -43107767 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 1566 247 53 59 chr18 42881167 42881211 -43107723 + MLT2B1 LTR ERVL 477 520 0 693 334 66 33 chr18 42881211 42881639 -43107295 - L2 LINE L2 -369 2944 2488 252 407 28 11 chr18 42882369 42882551 -43106383 + L3 LINE CR1 1388 1572 -5 23 86 0 0 chr18 42882708 42882766 -43106168 + AT_rich Low_complexity Low_complexity 1 58 0 305 320 61 35 chr18 42882815 42883012 -43105922 - MIR SINE MIR -55 207 6 1213 188 0 18 chr18 42883211 42883440 -43105494 + AluSq SINE Alu 85 309 -4 1523 271 86 57 chr18 42883537 42885443 -43103491 - L1MCc LINE L1 -4167 2440 300 327 303 35 14 chr18 42885789 42885931 -43103003 - L1MCc LINE L1 -6258 168 24 1872 137 10 46 chr18 42887172 42887479 -43101455 - AluSq SINE Alu -15 298 3 2316 90 0 3 chr18 42888439 42888739 -43100195 + AluY SINE Alu 1 299 -12 1902 67 3 43 chr18 42888929 42889211 -43099723 - L1PA7 LINE L1 -4 6150 5880 447 329 9 36 chr18 42889942 42890265 -43098669 + MER115 DNA AcHobo 309 680 -13 250 355 48 8 chr18 42891313 42891437 -43097497 - L3 LINE CR1 -483 1094 966 738 104 0 0 chr18 42891587 42891717 -43097217 + AluY SINE Alu 181 310 0 271 284 178 18 chr18 42892560 42892785 -43096149 - L3 LINE CR1 -607 970 710 210 279 44 0 chr18 42892820 42892888 -43096046 + MIR SINE MIR 46 116 -92 1645 197 0 3 chr18 42892916 42893210 -43095724 + AluJb SINE Alu 2 294 -18 2200 105 0 0 chr18 42893419 42893746 -43095188 - AluSq SINE Alu 0 327 1 1554 172 60 18 chr18 42893776 42894108 -43094826 - MER7A DNA MER2_type -2 344 1 491 228 0 0 chr18 42894547 42894639 -43094295 + MER31A LTR ERV1 102 193 -292 318 180 29 151 chr18 42894626 42894765 -43094169 + Tigger3(Golem) DNA MER2_type 2822 2943 -86 * 1551 133 48 4 chr18 42894770 42895041 -43093893 + MER31A LTR ERV1 203 485 0 2108 171 0 6 chr18 42895208 42895547 -43093387 - MER1B DNA MER1_type 0 337 1 237 65 0 0 chr18 42896564 42896595 -43092339 + (T)n Simple_repeat Simple_repeat 1 31 0 259 326 71 0 chr18 42897907 42898005 -43090929 - MIR3 SINE MIR -17 191 87 1874 127 0 11 chr18 42898064 42898332 -43090602 + AluSx SINE Alu 1 265 -47 382 337 51 17 chr18 42898934 42899109 -43089825 + MIR SINE MIR 16 196 -66 208 320 39 26 chr18 42899377 42899455 -43089479 - MIR SINE MIR -67 141 63 513 302 56 39 chr18 42900163 42900342 -43088592 + MIR3 SINE MIR 16 197 -11 419 346 5 48 chr18 42900353 42900541 -43088393 + MIR3 SINE MIR 24 203 -5 224 282 37 120 chr18 42900547 42900788 -43088146 - L2 LINE L2 -95 3218 2998 228 125 25 0 chr18 42902349 42902389 -43086545 - L2 LINE L2 0 3313 3273 861 151 0 14 chr18 42902474 42902613 -43086321 - FLAM_C SINE Alu -4 139 3 556 358 46 45 chr18 42902759 42903388 -43085546 - L2 LINE L2 -1119 2195 1566 200 159 0 23 chr18 42903842 42903886 -43085048 + CT-rich Low_complexity Low_complexity 2 44 0 1697 150 0 0 chr18 42903888 42904154 -43084780 - AluSx SINE Alu -3 309 44 197 406 65 0 chr18 42904866 42905021 -43083913 + L2 LINE L2 2553 2717 -597 189 231 19 39 chr18 42905273 42905325 -43083609 + L2 LINE L2 3020 3070 -202 231 217 0 0 chr18 42907129 42907175 -43081759 + (TG)n Simple_repeat Simple_repeat 1 46 0 327 253 44 148 chr18 42909889 42910071 -43078863 + MER5A DNA MER1_type 3 165 -24 34 24 0 0 chr18 42911585 42911626 -43077308 + AT_rich Low_complexity Low_complexity 1 41 0 333 187 0 0 chr18 42912004 42912079 -43076855 + (TATTG)n Simple_repeat Simple_repeat 3 77 0 2163 151 5 24 chr18 42912854 42913225 -43075709 + THE1B LTR MaLR 1 364 0 23 0 0 0 chr18 42913365 42913388 -43075546 + AT_rich Low_complexity Low_complexity 1 23 0 1363 192 19 0 chr18 42913708 42913968 -43074966 - AluSx SINE Alu -2 310 46 354 317 142 16 chr18 42914289 42914472 -43074462 + L2 LINE L2 3108 3313 0 22 0 0 0 chr18 42914600 42914622 -43074312 + AT_rich Low_complexity Low_complexity 1 22 0 1087 70 0 37 chr18 42914811 42914907 -43074027 + (TTTC)n Simple_repeat Simple_repeat 1 88 -92 1937 74 4 0 chr18 42914907 42915163 -43073771 - L1PA7 LINE L1 -4 6150 5894 1087 70 0 37 chr18 42915163 42915253 -43073681 + (TTTC)n Simple_repeat Simple_repeat 88 180 0 905 135 17 6 chr18 42915250 42915428 -43073506 + CT-rich Low_complexity Low_complexity 1 180 0 * 1203 207 6 63 chr18 42915428 42915616 -43073318 - AluJo SINE Alu -11 301 137 2345 90 0 3 chr18 42915616 42915927 -43073007 - AluY SINE Alu -1 310 1 1203 207 6 63 chr18 42915927 42916057 -43072877 - AluJo SINE Alu -175 137 1 4491 81 3 0 chr18 42916395 42916985 -43071949 - L1PA7 LINE L1 -1 6153 5562 9350 88 33 75 chr18 42916985 42919171 -43069763 + L1PA4 LINE L1 4020 6154 -1 394 181 11 69 chr18 42919405 42919593 -43069341 + (TTATA)n Simple_repeat Simple_repeat 1 177 0 4531 188 38 45 chr18 42920773 42921529 -43067405 + L1MA9 LINE L1 5074 5834 -478 324 0 0 0 chr18 42921529 42921565 -43067369 + (CA)n Simple_repeat Simple_repeat 2 37 0 4531 188 38 45 chr18 42921565 42921915 -43067019 + L1MA9 LINE L1 5834 6170 -142 225 65 0 0 chr18 42921915 42921946 -43066988 + (CA)n Simple_repeat Simple_repeat 2 32 0 4531 188 38 45 chr18 42921946 42922088 -43066846 + L1MA9 LINE L1 6170 6312 0 24 0 0 0 chr18 42922088 42922112 -43066822 + AT_rich Low_complexity Low_complexity 1 24 0 734 235 28 0 chr18 42922124 42922303 -43066631 + L1M4 LINE L1 7 190 -6352 519 46 0 0 chr18 42922299 42922364 -43066570 - L1P3 LINE L1 -583 5589 5525 * 552 93 0 0 chr18 42922364 42922450 -43066484 + L1PA7 LINE L1 6067 6152 -2 274 252 21 119 chr18 42922450 42922593 -43066341 + L1M4 LINE L1 178 306 -6236 498 152 43 74 chr18 42922593 42922714 -43066220 + MLT2B1 LTR ERVL 44 175 -345 * 782 224 103 0 chr18 42922711 42922876 -43066058 + MLT2B1 LTR ERVL 332 513 -7 40 59 0 0 chr18 42924987 42925055 -43063879 + AT_rich Low_complexity Low_complexity 1 68 0 4284 164 41 14 chr18 42925070 42925547 -43063387 - Tigger3b DNA MER2_type -2206 822 313 387 0 0 0 chr18 42925547 42925590 -43063344 + (CA)n Simple_repeat Simple_repeat 2 44 0 4284 164 41 14 chr18 42925590 42925912 -43063022 - Tigger3b DNA MER2_type -2715 313 1 1577 188 20 12 chr18 42925940 42926285 -43062649 + L1MB3 LINE L1 5835 6182 -1 390 310 46 51 chr18 42927187 42927384 -43061550 + MIR SINE MIR 7 199 -61 34 65 0 0 chr18 42927421 42927483 -43061451 + AT_rich Low_complexity Low_complexity 1 62 0 506 308 61 33 chr18 42927483 42927697 -43061237 - MIR SINE MIR -29 233 14 27 49 0 0 chr18 42929995 42930036 -43058898 + AT_rich Low_complexity Low_complexity 1 41 0 204 209 23 0 chr18 42931838 42931881 -43057053 - L2 LINE L2 -12 3260 3217 2228 115 3 0 chr18 42931881 42932185 -43056749 + AluSq SINE Alu 1 305 -8 473 163 3 46 chr18 42932778 42933079 -43055855 + (TA)n Simple_repeat Simple_repeat 1 288 0 294 301 55 0 chr18 42935088 42935161 -43053773 + L2 LINE L2 3196 3272 0 210 156 0 0 chr18 42936284 42936329 -43052605 + (TCTCTG)n Simple_repeat Simple_repeat 2 46 0 6621 70 23 0 chr18 42936345 42937188 -43051746 - L1PA7 LINE L1 0 6154 5279 219 36 0 0 chr18 42937188 42937216 -43051718 + (TTG)n Simple_repeat Simple_repeat 2 29 0 6621 70 23 0 chr18 42937216 42937627 -43051307 - L1PA7 LINE L1 -875 5279 4879 645 149 0 0 chr18 42937628 42937735 -43051199 + L1P LINE L1 4439 4545 -1601 205 242 15 15 chr18 42938639 42938705 -43050229 + (TA)n Simple_repeat Simple_repeat 2 67 0 314 290 0 0 chr18 42938761 42938830 -43050104 - MER81 DNA DNA -45 69 1 824 214 52 0 chr18 42939039 42939249 -43049685 + MER33 DNA MER1_type 12 232 -92 1651 204 12 44 chr18 42939259 42939665 -43049269 + L1MD2 LINE L1 5941 6333 -26 431 209 35 0 chr18 42939665 42939780 -43049154 + MER33 DNA MER1_type 205 323 -1 221 243 0 14 chr18 42940893 42940963 -43047971 + A-rich Low_complexity Low_complexity 1 69 0 299 263 59 34 chr18 42941449 42941567 -43047367 - MIR SINE MIR -23 239 119 231 36 0 0 chr18 42943285 42943313 -43045621 + (T)n Simple_repeat Simple_repeat 1 28 0 755 128 0 15 chr18 42943572 42943705 -43045229 + (TCC)n Simple_repeat Simple_repeat 3 133 0 558 198 9 17 chr18 42944104 42944220 -43044714 + MER5A DNA MER1_type 5 119 -70 7061 186 19 25 chr18 42944284 42946984 -43041950 + L1PA8A LINE L1 3 2743 -3718 9434 133 49 4 chr18 42946984 42949189 -43039745 + L1PA8A LINE L1 4198 6443 -3 1473 240 113 59 chr18 42949303 42949845 -43039089 + MLT1E LTR MaLR 23 593 0 389 286 88 39 chr18 42950175 42950357 -43038577 - MIR SINE MIR -59 203 13 396 0 0 0 chr18 42950416 42950460 -43038474 + (CA)n Simple_repeat Simple_repeat 2 45 0 345 243 10 29 chr18 42950463 42950566 -43038368 - L1MC4 LINE L1 -1332 6710 6610 320 206 33 54 chr18 42950527 42950619 -43038315 + L1MC4 LINE L1 6614 6703 -1339 * 315 264 11 33 chr18 42950579 42950670 -43038264 - L1MC4 LINE L1 -1339 6703 6615 * 358 263 46 86 chr18 42950971 42951146 -43037788 - MER5B DNA MER1_type -3 175 8 230 303 0 15 chr18 42952697 42952763 -43036171 - L2 LINE L2 -62 3251 3187 1427 119 47 0 chr18 42952805 42953041 -43035893 - L1PA11 LINE L1 0 6174 5928 195 42 0 0 chr18 42953693 42953717 -43035217 + (GA)n Simple_repeat Simple_repeat 1 24 0 1161 202 52 102 chr18 42954169 42954350 -43034584 - Charlie4a DNA MER1_type -1454 507 319 2056 94 17 3 chr18 42954350 42954648 -43034286 + AluSg SINE Alu 1 302 -8 1161 202 52 102 chr18 42954648 42954927 -43034007 - Charlie4a DNA MER1_type -1642 319 70 3598 204 11 52 chr18 42955528 42956459 -43032475 + L1PA13 LINE L1 5296 6189 0 2020 269 55 20 chr18 42956717 42957432 -43031502 + L1ME1 LINE L1 4904 5834 -332 2520 38 0 13 chr18 42957432 42957747 -43031187 + AluY SINE Alu 1 311 0 2020 269 55 20 chr18 42957747 42957928 -43031006 + L1ME1 LINE L1 5834 6007 -159 2497 58 0 3 chr18 42958681 42958992 -43029942 + AluY SINE Alu 1 310 -1 216 97 0 0 chr18 42959040 42959071 -43029863 + (T)n Simple_repeat Simple_repeat 1 31 0 511 99 0 0 chr18 42959085 42959166 -43029768 + Alu SINE Alu 232 312 0 1932 242 43 16 chr18 42959171 42959732 -43029202 - L1MC4 LINE L1 -146 7896 7321 216 0 0 0 chr18 42959842 42959866 -43029068 + (A)n Simple_repeat Simple_repeat 1 24 0 186 103 0 0 chr18 42960418 42960447 -43028487 + (A)n Simple_repeat Simple_repeat 1 29 0 2379 78 0 3 chr18 42963260 42963556 -43025378 + AluY SINE Alu 1 295 -16 220 241 203 0 chr18 42963733 42963812 -43025122 + MIR SINE MIR 120 214 -48 775 289 51 32 chr18 42965423 42965776 -43023158 + MLT1G3 LTR MaLR 1 379 -216 738 181 195 24 chr18 42965998 42966208 -43022726 + MLT1F1 LTR MaLR 197 442 -125 462 246 37 68 chr18 42966201 42966392 -43022542 + MLT1F1 LTR MaLR 399 583 -12 * 2514 53 0 3 chr18 42966425 42966724 -43022210 - AluY SINE Alu -13 298 1 597 353 118 35 chr18 42966773 42967408 -43021526 - L2 LINE L2 -568 2746 2059 1066 207 150 14 chr18 42967410 42967690 -43021244 - MLT1F1 LTR MaLR -44 523 206 22224 20 2 0 chr18 42967748 42971154 -43017780 + L1HS LINE L1 2743 6155 0 294 73 0 0 chr18 42971202 42971243 -43017691 + (A)n Simple_repeat Simple_repeat 1 41 0 257 270 58 58 chr18 42971654 42971791 -43017143 + MIR SINE MIR 49 185 -77 21 36 0 0 chr18 42972134 42972162 -43016772 + AT_rich Low_complexity Low_complexity 1 28 0 2204 113 7 3 chr18 42972165 42972474 -43016460 + AluSg SINE Alu 1 310 0 268 245 183 11 chr18 42973572 42973676 -43015258 - MIR SINE MIR -67 141 30 23 0 0 0 chr18 42974531 42974554 -43014380 + AT_rich Low_complexity Low_complexity 1 23 0 585 278 7 0 chr18 42976723 42976867 -43012067 + MIR SINE MIR 115 259 -3 23 33 0 0 chr18 42977764 42977794 -43011140 + AT_rich Low_complexity Low_complexity 1 30 0 206 321 0 0 chr18 42978381 42978437 -43010497 + T-rich Low_complexity Low_complexity 3 58 0 216 227 103 72 chr18 42979445 42979542 -43009392 + MIR SINE MIR 64 163 -99 206 393 40 7 chr18 42979614 42979764 -43009170 - L3 LINE CR1 -223 1354 1200 360 239 23 11 chr18 42979939 42980027 -43008907 - MER69 DNA AcHobo 0 2526 2438 1915 181 25 3 chr18 42980524 42980849 -43008085 + MER1B DNA MER1_type 3 334 -5 959 86 16 0 chr18 42980975 42981103 -43007831 + AluSq SINE Alu 152 281 -32 387 157 0 0 chr18 42981103 42981173 -43007761 + GA-rich Low_complexity Low_complexity 3 72 0 357 185 12 12 chr18 42982130 42982211 -43006723 + MLT1J2 LTR MaLR 370 450 0 469 310 21 7 chr18 42983094 42983239 -43005695 - MIR SINE MIR -66 196 50 201 154 0 0 chr18 42984899 42984938 -43003996 + (TG)n Simple_repeat Simple_repeat 2 40 0 268 350 121 14 chr18 42985368 42985603 -43003331 + L2 LINE L2 1862 2137 -1177 835 223 136 35 chr18 42985603 42985850 -43003084 + MER2 DNA MER2_type 1 287 -57 1873 116 3 72 chr18 42985850 42986169 -43002765 - AluSg SINE Alu -11 299 3 835 223 136 35 chr18 42986169 42986231 -43002703 + MER2 DNA MER2_type 287 341 -3 268 350 121 14 chr18 42986231 42986292 -43002642 + L2 LINE L2 2137 2190 -1124 342 307 83 43 chr18 42986546 42986800 -43002134 + L2 LINE L2 1902 2165 -1149 562 369 53 22 chr18 42986815 42987135 -43001799 + L2 LINE L2 2377 2706 -608 485 348 35 26 chr18 42987437 42987664 -43001270 + MIR SINE MIR 1 229 -33 32 0 0 0 chr18 42987673 42987705 -43001229 + AT_rich Low_complexity Low_complexity 1 32 0 1321 208 106 47 chr18 42987955 42988359 -43000575 - MSTC LTR MaLR 0 428 1 207 0 0 0 chr18 42988401 42988424 -43000510 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 324 0 0 0 chr18 42988423 42988459 -43000475 + (CA)n Simple_repeat Simple_repeat 2 37 0 22 35 0 0 chr18 42988620 42988649 -43000285 + AT_rich Low_complexity Low_complexity 1 29 0 414 235 11 38 chr18 42988867 42989050 -42999884 - Charlie7 DNA MER1_type -1 2611 2434 238 224 47 35 chr18 42989052 42989137 -42999797 - Charlie7 DNA MER1_type -2525 87 2 2266 173 26 9 chr18 42989168 42989599 -42999335 + MER61C LTR ERV1 13 434 0 2176 203 31 5 chr18 42990968 42991392 -42997542 + MER44D DNA MER2_type 1 490 -115 1347 179 38 0 chr18 42991474 42991736 -42997198 - MER7A DNA MER2_type -12 334 65 1078 220 29 41 chr18 42991744 42992139 -42996795 - L1PA16 LINE L1 -2 6166 5796 557 165 0 0 chr18 42992139 42992230 -42996704 - MER7A DNA MER2_type -257 89 1 * 601 179 19 19 chr18 42992230 42992334 -42996600 + MER44D DNA MER2_type 502 605 0 1904 225 40 6 chr18 42992472 42992943 -42995991 + L1MD3 LINE L1 7509 7995 0 629 204 11 74 chr18 42993331 42993507 -42995427 + MER97b DNA MER1_type? 15 179 -874 1263 213 56 46 chr18 42993575 42993903 -42995031 + LTR52 LTR ERVL 1 324 -97 1507 124 0 0 chr18 42993903 42994104 -42994830 - AluSg/x SINE Alu -17 293 93 1263 213 56 46 chr18 42994104 42994120 -42994814 + LTR52 LTR ERVL 324 338 -83 227 79 26 0 chr18 42994120 42994158 -42994776 + (TG)n Simple_repeat Simple_repeat 1 39 0 1263 213 56 46 chr18 42994158 42994226 -42994708 + LTR52 LTR ERVL 338 418 -3 245 67 90 22 chr18 42994953 42995042 -42993892 + (TA)n Simple_repeat Simple_repeat 2 96 0 277 171 45 23 chr18 42995044 42995132 -42993802 + (TATAA)n Simple_repeat Simple_repeat 5 94 0 305 152 46 20 chr18 42995143 42995294 -42993640 + (TATAA)n Simple_repeat Simple_repeat 5 159 0 281 90 97 26 chr18 42995355 42995510 -42993424 + (TA)n Simple_repeat Simple_repeat 1 166 0 204 164 66 0 chr18 42995527 42995588 -42993346 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 406 58 122 6 chr18 42995588 42995744 -42993190 + (TA)n Simple_repeat Simple_repeat 1 174 0 267 134 37 0 chr18 42995790 42995872 -42993062 + (TA)n Simple_repeat Simple_repeat 2 86 0 323 192 14 14 chr18 42996478 42996551 -42992383 - L1PB4 LINE L1 -2 6154 6082 189 0 0 0 chr18 42999642 42999663 -42989271 + (TTA)n Simple_repeat Simple_repeat 2 22 0 415 333 32 0 chr18 42999815 42999971 -42988963 + MER58A DNA MER1_type 4 164 0 22 0 0 0 chr18 43001819 43001841 -42987093 + AT_rich Low_complexity Low_complexity 1 22 0 1551 86 0 10 chr18 43002063 43002283 -42986651 + AluSg/x SINE Alu 89 306 0 361 296 92 20 chr18 43002894 43003046 -42985888 - MIR SINE MIR -27 235 73 468 316 62 43 chr18 43004718 43004927 -42984007 + MIR SINE MIR 24 236 -26 2226 194 38 56 chr18 43004947 43005577 -42983357 + LTR27 LTR ERV1 3 706 -128 271 138 103 0 chr18 43005597 43005655 -42983279 + LTR27 LTR ERV1 571 634 -2 23 54 0 0 chr18 43005661 43005698 -42983236 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr18 43007433 43007462 -42981472 + AT_rich Low_complexity Low_complexity 1 29 0 194 259 37 0 chr18 43007499 43007553 -42981381 + MIR SINE MIR 32 87 -121 288 335 59 5 chr18 43009268 43009489 -42979445 - L1MDa LINE L1 -3376 3164 2932 4221 233 90 27 chr18 43009541 43010542 -42978392 - L1MDa LINE L1 -3611 2929 1992 337 39 39 0 chr18 43010542 43010593 -42978341 + (CA)n Simple_repeat Simple_repeat 2 54 0 4221 233 90 27 chr18 43010593 43011394 -42977540 - L1MDa LINE L1 -4548 1992 1021 527 223 91 5 chr18 43011392 43011612 -42977322 - L1MDa LINE L1 -4020 2520 2282 * 377 273 91 9 chr18 43011609 43011719 -42977215 - L1MDa LINE L1 -5523 1017 899 * 21 0 0 0 chr18 43012287 43012308 -42976626 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr18 43012373 43012394 -42976540 + AT_rich Low_complexity Low_complexity 1 21 0 631 233 33 7 chr18 43213513 43213663 -42775271 + MIR SINE MIR 2 155 -107 441 224 10 0 chr18 43213777 43213875 -42775059 + MIR SINE MIR 151 249 -13 534 299 34 20 chr18 43214568 43214797 -42774137 + MIR SINE MIR 20 248 -14 22 0 0 0 chr18 43215471 43215493 -42773441 + AT_rich Low_complexity Low_complexity 1 22 0 383 274 20 55 chr18 43216736 43216785 -42772149 + MIR SINE MIR 103 152 -110 2120 106 3 0 chr18 43216785 43217096 -42771838 + AluSp SINE Alu 1 312 0 383 274 20 55 chr18 43217096 43217191 -42771743 + MIR SINE MIR 152 243 -19 335 308 0 17 chr18 43217568 43217685 -42771249 + GA-rich Low_complexity Low_complexity 3 117 0 181 204 23 23 chr18 43218237 43218281 -42770653 - MIR3 SINE MIR -21 187 144 346 351 0 0 chr18 43218429 43218523 -42770411 + L2 LINE L2 3178 3271 -1 237 279 208 26 chr18 43219294 43219448 -42769486 - L3 LINE CR1 -88 1489 1308 326 324 28 0 chr18 43220511 43220619 -42768315 - L2 LINE L2 -4 3309 3199 358 309 154 5 chr18 43221136 43221324 -42767610 + MLT1J LTR MaLR 3 218 -293 279 319 21 62 chr18 43222113 43222257 -42766677 + MIR3 SINE MIR 65 202 -6 439 283 164 11 chr18 43223061 43223238 -42765696 + MIR SINE MIR 53 256 -6 378 343 35 7 chr18 43223305 43223448 -42765486 + MIR SINE MIR 28 174 -88 22 0 0 0 chr18 43224216 43224238 -42764696 + AT_rich Low_complexity Low_complexity 1 22 0 230 237 50 29 chr18 43224392 43224531 -42764403 + L1ME LINE L1 5174 5315 -831 631 301 109 18 chr18 43224695 43225091 -42763843 + L1ME LINE L1 5383 5814 -307 1219 273 71 26 chr18 43225142 43225616 -42763318 + MLT1G1 LTR MaLR 1 492 -98 428 259 52 0 chr18 43225744 43225860 -42763074 + MLT1G1 LTR MaLR 469 590 0 1063 247 28 8 chr18 43225945 43226196 -42762738 + MLT1A1 LTR MaLR 24 279 -86 549 0 0 0 chr18 43226203 43226264 -42762670 + (TG)n Simple_repeat Simple_repeat 2 62 0 236 196 22 0 chr18 43226431 43226477 -42762457 + GA-rich Low_complexity Low_complexity 3 49 0 502 299 33 29 chr18 43226555 43226786 -42762148 + MIR SINE MIR 17 248 -14 271 202 23 48 chr18 43228362 43228465 -42760469 + L1MC2 LINE L1 6232 6332 -2 378 330 47 38 chr18 43230833 43231045 -42757889 - MIR SINE MIR 0 262 49 495 259 106 17 chr18 43231110 43231346 -42757588 - MIR SINE MIR -2 260 4 1851 178 7 0 chr18 43232328 43232621 -42756313 - AluJb SINE Alu -17 295 1 21 36 0 0 chr18 43233550 43233578 -42755356 + AT_rich Low_complexity Low_complexity 1 28 0 603 246 78 42 chr18 43234132 43234323 -42754611 - MIR SINE MIR -35 227 30 346 218 9 55 chr18 43234501 43234611 -42754323 + MER74B LTR ERVL 69 173 -449 * 473 275 81 21 chr18 43234605 43234841 -42754093 + MER74B LTR ERVL 299 548 -74 1155 218 59 53 chr18 43234999 43235338 -42753596 + MER58B DNA MER1_type 1 341 0 1786 130 171 19 chr18 43236122 43236438 -42752496 - THE1B LTR MaLR 0 364 1 11769 94 5 2 chr18 43236439 43238012 -42750922 - THE1B-int LTR MaLR -1 1579 2 1679 135 186 19 chr18 43238013 43238325 -42750609 - THE1B LTR MaLR 0 364 1 609 125 25 8 chr18 43238469 43238589 -42750345 + GA-rich Low_complexity Low_complexity 4 125 0 190 362 43 14 chr18 43239238 43239307 -42749627 + MIR SINE MIR 42 112 -96 2382 142 0 8 chr18 43239470 43239837 -42749097 + THE1B LTR MaLR 1 364 0 277 325 36 72 chr18 43239973 43240167 -42748767 - L2 LINE L2 -337 2977 2791 205 160 40 53 chr18 43241035 43241110 -42747824 + (TTAAA)n Simple_repeat Simple_repeat 4 77 0 263 204 0 0 chr18 43241431 43241480 -42747454 - L2 LINE L2 -10 3303 3255 290 277 86 51 chr18 43241682 43241864 -42747070 + MIR SINE MIR 37 219 -43 422 305 85 18 chr18 43243023 43243187 -42745747 - MIR3 SINE MIR -3 205 31 230 277 85 0 chr18 43243230 43243324 -42745610 + MARNA DNA Mariner 147 248 -338 385 302 49 12 chr18 43246399 43246559 -42742375 + MIR SINE MIR 25 186 -66 207 274 0 0 chr18 43246692 43246743 -42742191 - L2 LINE L2 -1 3312 3262 273 333 88 22 chr18 43247376 43247669 -42741265 - L2 LINE L2 0 3313 2917 5351 128 25 20 chr18 43247820 43249014 -42739920 - L1PB2 LINE L1 -11 6140 4934 186 181 0 157 chr18 43249239 43249322 -42739612 - L2 LINE L2 -813 2501 2432 23 33 0 0 chr18 43249445 43249475 -42739459 + AT_rich Low_complexity Low_complexity 1 30 0 728 210 80 45 chr18 43250424 43250648 -42738286 + L1ME1 LINE L1 5933 6164 -2 188 324 139 28 chr18 43250823 43250931 -42738003 + L2 LINE L2 3141 3260 -12 1962 149 3 16 chr18 43251303 43251612 -42737322 - AluJo SINE Alu -7 305 1 204 40 0 0 chr18 43252223 43252248 -42736686 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 189 74 0 0 chr18 43253286 43253313 -42735621 + (TTTTTG)n Simple_repeat Simple_repeat 1 27 0 531 0 0 0 chr18 43254127 43254186 -42734748 + (TA)n Simple_repeat Simple_repeat 1 59 0 531 0 0 0 chr18 43254967 43255026 -42733908 + (TA)n Simple_repeat Simple_repeat 2 60 0 274 252 35 52 chr18 43255367 43255482 -42733452 - MIR SINE MIR -68 194 82 1747 172 33 10 chr18 43257127 43257429 -42731505 + AluJb SINE Alu 1 309 -3 207 267 0 0 chr18 43257479 43257524 -42731410 + MIR SINE MIR 108 152 -56 238 292 9 0 chr18 43257524 43257637 -42731297 + L1ME LINE L1 5742 5855 -266 214 284 86 25 chr18 43257798 43257879 -42731055 + MIR3 SINE MIR 121 206 -2 358 337 48 60 chr18 43258042 43258294 -42730640 + L2 LINE L2 3024 3272 0 1592 180 7 35 chr18 43258958 43259247 -42729687 + AluJo SINE Alu 2 282 -30 27 62 0 0 chr18 43259247 43259295 -42729639 + AT_rich Low_complexity Low_complexity 1 48 0 1247 317 108 31 chr18 43259355 43260168 -42728766 + L2 LINE L2 1734 2609 -705 526 288 81 54 chr18 43260524 43260746 -42728188 + MIR SINE MIR 9 236 -26 208 164 68 96 chr18 43260894 43260967 -42727967 - MIR SINE MIR -80 182 112 2280 143 89 0 chr18 43261003 43261396 -42727538 + MSTA LTR MaLR 1 428 0 264 306 18 18 chr18 43262028 43262139 -42726795 - MLT1L LTR MaLR -10 605 495 2158 111 0 14 chr18 43262254 43262589 -42726345 + AluY SINE Alu 1 331 0 489 293 46 8 chr18 43265250 43265485 -42723449 + MLT1G1 LTR MaLR 1 241 -308 235 208 21 0 chr18 43265946 43265994 -42722940 - L2 LINE L2 0 3272 3224 332 374 51 53 chr18 43266176 43266609 -42722325 - L2 LINE L2 -338 2976 2545 1368 181 60 4 chr18 43266692 43266977 -42721957 - AluJo SINE Alu 0 301 2 65 66 0 0 chr18 43267030 43267151 -42721783 + AT_rich Low_complexity Low_complexity 1 121 0 397 82 0 0 chr18 43267151 43267212 -42721722 - L1PB3 LINE L1 -2 6152 6092 1336 181 50 41 chr18 43267530 43267873 -42721061 - L1MA8 LINE L1 -3 6288 5943 2069 153 0 0 chr18 43267874 43268169 -42720765 - AluSx SINE Alu -17 295 1 2190 159 54 0 chr18 43268200 43268756 -42720178 - L1MA8 LINE L1 -591 5721 5137 605 250 7 7 chr18 43269195 43269331 -42719603 + AluJo SINE Alu 1 136 -176 336 250 75 0 chr18 43270350 43270430 -42718504 - MIR3 SINE MIR -11 197 112 256 270 0 16 chr18 43272634 43272697 -42716237 + GA-rich Low_complexity Low_complexity 1 62 0 251 250 74 56 chr18 43273713 43273821 -42715113 - L2 LINE L2 -17 3296 3187 186 43 0 0 chr18 43274166 43274189 -42714745 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 528 302 9 30 chr18 43276376 43276567 -42712367 + MIR SINE MIR 63 249 -13 522 93 52 0 chr18 43276728 43276825 -42712109 + CT-rich Low_complexity Low_complexity 1 102 0 467 222 203 33 chr18 43276858 43277011 -42711923 - MER5A DNA MER1_type -2 187 9 674 290 33 25 chr18 43277165 43277410 -42711524 - MIR SINE MIR -10 252 6 227 173 0 19 chr18 43277844 43277896 -42711038 + MARNA DNA Mariner 186 236 -350 827 196 18 12 chr18 43278445 43278608 -42710326 + AluJo SINE Alu 137 300 -2 325 249 17 27 chr18 43278635 43278752 -42710182 - MIR SINE MIR -66 142 37 255 79 0 0 chr18 43278834 43278872 -42710062 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 180 200 0 0 chr18 43278862 43278907 -42710027 + GA-rich Low_complexity Low_complexity 4 48 0 * 2378 63 3 0 chr18 43278943 43279230 -42709704 - AluY SINE Alu -16 295 8 914 185 138 0 chr18 43280100 43280289 -42708645 - MER20 DNA MER1_type -4 215 1 207 69 0 0 chr18 43280472 43280501 -42708433 + (CAAAAA)n Simple_repeat Simple_repeat 5 33 0 1112 158 9 9 chr18 43281564 43281786 -42707148 + L1MA9 LINE L1 6047 6268 -44 255 310 58 11 chr18 43281809 43281896 -42707038 - MIR SINE MIR -78 130 40 2172 109 87 6 chr18 43282222 43282569 -42706365 - THE1C LTR MaLR 0 375 1 283 318 34 11 chr18 43283158 43283246 -42705688 - MIR SINE MIR -114 148 59 194 377 41 8 chr18 43284198 43284320 -42704614 - MIR3 SINE MIR -76 132 7 302 268 37 12 chr18 43284338 43284420 -42704514 - MIR SINE MIR -67 195 112 281 330 0 62 chr18 43285205 43285302 -42703632 + MIR3 SINE MIR 8 98 -110 263 259 0 17 chr18 43285438 43285496 -42703438 + MIR3 SINE MIR 110 166 -42 213 248 191 48 chr18 43285493 43285598 -42703336 + MER5A DNA MER1_type 20 139 -50 * 270 252 112 19 chr18 43286007 43286114 -42702820 + MER94 DNA DNA 5 121 -13 2217 134 0 3 chr18 43286189 43286502 -42702432 + AluSx SINE Alu 1 312 0 420 82 0 0 chr18 43286506 43286567 -42702367 + (GGGGA)n Simple_repeat Simple_repeat 5 65 0 198 0 0 0 chr18 43287270 43287292 -42701642 + (A)n Simple_repeat Simple_repeat 1 22 0 347 286 94 57 chr18 43288834 43289026 -42699908 + MIR SINE MIR 11 209 -53 4102 131 15 126 chr18 43289096 43290645 -42698289 + pTR5 LTR ERV1 743 2606 0 192 279 131 0 chr18 43290650 43290711 -42698223 + MIR SINE MIR 76 144 -118 2361 68 3 34 chr18 43290988 43291309 -42697625 + AluY SINE Alu 1 311 0 21 0 0 0 chr18 43294138 43294159 -42694775 + AT_rich Low_complexity Low_complexity 1 21 0 187 314 18 95 chr18 43294177 43294346 -42694588 - MIR SINE MIR -56 206 51 191 222 56 0 chr18 43294377 43294431 -42694503 - L2 LINE L2 0 3313 3257 882 282 75 0 chr18 43295125 43295366 -42693568 + MIR SINE MIR 1 259 -3 275 277 109 29 chr18 43295375 43295512 -42693422 - MIR SINE MIR -78 184 37 677 214 188 0 chr18 43295930 43296084 -42692850 - MER5A DNA MER1_type -3 186 4 471 322 39 11 chr18 43296092 43296272 -42692662 + MER5A DNA MER1_type 1 185 -4 298 300 38 50 chr18 43296130 43296275 -42692659 - MER5A DNA MER1_type -30 159 15 * 2127 127 0 7 chr18 43296275 43296575 -42692359 + AluSx SINE Alu 1 298 -14 298 300 38 50 chr18 43296575 43296589 -42692345 - MER5A DNA MER1_type -174 15 2 291 288 0 0 chr18 43296623 43296689 -42692245 + L2 LINE L2 3235 3300 -13 1960 101 4 4 chr18 43297735 43298002 -42690932 - AluSx SINE Alu -19 293 27 2177 137 22 25 chr18 43299102 43299467 -42689467 + THE1B LTR MaLR 1 364 0 212 342 154 0 chr18 43300183 43300332 -42688602 + MIR SINE MIR 90 261 -1 2048 115 39 16 chr18 43300534 43300839 -42688095 - AluSx SINE Alu 0 312 1 189 0 0 0 chr18 43301188 43301209 -42687725 + (A)n Simple_repeat Simple_repeat 1 21 0 432 267 130 0 chr18 43301420 43301551 -42687383 + MER45 DNA AcHobo 32 179 -1402 642 134 0 0 chr18 43301825 43301922 -42687012 + AluJb SINE Alu 199 295 -17 1425 185 9 89 chr18 43303267 43303591 -42685343 + AluJo SINE Alu 1 298 -14 548 342 73 16 chr18 43303887 43304270 -42684664 + MLT1K LTR MaLR 184 588 0 206 327 93 19 chr18 43304316 43304423 -42684511 - L2 LINE L2 -203 3069 2955 227 351 108 0 chr18 43305393 43305504 -42683430 + L2 LINE L2 3150 3272 0 220 279 0 33 chr18 43305956 43306017 -42682917 - L2 LINE L2 0 3313 3255 215 320 148 48 chr18 43306208 43306586 -42682348 - L2 LINE L2 -1333 1981 1566 463 248 54 0 chr18 43307078 43307207 -42681727 + MER117 DNA MER1_type 61 196 -1 2386 180 26 0 chr18 43307596 43308012 -42680922 - MSTA LTR MaLR 0 428 2 202 352 103 47 chr18 43308158 43308567 -42680367 + L2 LINE L2 2841 3272 0 211 189 0 0 chr18 43310708 43310745 -42678189 + GA-rich Low_complexity Low_complexity 4 40 0 2010 124 3 7 chr18 43311270 43311561 -42677373 + AluSx SINE Alu 1 290 -22 23 54 0 0 chr18 43311565 43311602 -42677332 + AT_rich Low_complexity Low_complexity 1 37 0 1459 222 40 8 chr18 43311758 43312128 -42676806 + MER119 DNA MER1_type 148 529 -54 642 179 197 96 chr18 43312540 43312758 -42676176 + MIR SINE MIR 2 241 -21 329 327 44 18 chr18 43312768 43312881 -42676053 + L2 LINE L2 3182 3297 -16 1847 171 0 7 chr18 43313160 43313459 -42675475 + AluJo SINE Alu 1 297 -15 488 194 16 0 chr18 43313766 43313895 -42675039 + L1MD3 LINE L1 7841 7971 -24 21 36 0 0 chr18 43313912 43313940 -42674994 + AT_rich Low_complexity Low_complexity 1 28 0 2127 174 78 0 chr18 43314179 43314576 -42674358 + MSTA LTR MaLR 1 428 0 260 141 0 94 chr18 43315245 43315309 -42673625 - L2 LINE L2 0 3313 3256 2191 111 14 12 chr18 43315882 43316287 -42672647 + L1PB1 LINE L1 5805 6210 0 367 80 0 0 chr18 43316554 43316604 -42672330 + MER63 DNA MER1_type 1 50 -1011 1391 223 27 0 chr18 43316611 43316948 -42671986 + MER63 DNA MER1_type 425 770 -290 1467 130 9 30 chr18 43317060 43317290 -42671644 - AluSq SINE Alu -88 225 1 2551 167 36 102 chr18 43318098 43318841 -42670093 + LTR8A LTR ERV1 34 727 0 545 180 18 9 chr18 43318909 43319020 -42669914 - LTR23 LTR ERV1 -1 436 325 277 75 0 0 chr18 43319015 43319055 -42669879 + LTR23 LTR ERV1 398 437 0 * 1050 33 0 0 chr18 43319715 43319836 -42669098 - AluY SINE Alu -14 297 177 199 310 140 10 chr18 43320306 43320406 -42668528 - MIR SINE MIR -66 142 30 655 275 32 28 chr18 43320569 43320787 -42668147 + MIR SINE MIR 2 220 -42 201 121 0 0 chr18 43321784 43321817 -42667117 + (TA)n Simple_repeat Simple_repeat 2 34 0 345 325 186 5 chr18 43323027 43323221 -42665713 - L3 LINE CR1 -160 1417 1189 294 340 0 11 chr18 43323221 43323315 -42665619 + L2 LINE L2 3221 3313 0 1222 312 59 42 chr18 43323378 43323901 -42665033 - L3 LINE CR1 -467 1110 579 354 240 184 32 chr18 43324360 43324485 -42664449 + MIR3 SINE MIR 35 178 -30 282 180 0 0 chr18 43325044 43325094 -42663840 - MLT1K LTR MaLR 0 588 539 276 278 0 125 chr18 43325116 43325292 -42663642 - MLT1K LTR MaLR -158 430 277 1573 207 45 11 chr18 43325651 43326004 -42662930 + MLT1A1 LTR MaLR 1 365 0 2866 218 59 60 chr18 43326007 43327398 -42661536 + MLT1A1-int LTR MaLR 3 1735 0 2149 192 3 0 chr18 43327398 43327762 -42661172 + MLT1A1 LTR MaLR 1 365 0 2512 53 0 0 chr18 43330264 43330564 -42658370 + AluY SINE Alu 1 300 -11 1167 224 96 107 chr18 43330764 43331216 -42657718 - MLT1H LTR MaLR 0 549 102 1751 158 14 17 chr18 43331216 43331533 -42657401 + AluJb SINE Alu 1 312 0 1167 224 96 107 chr18 43331533 43331593 -42657341 - MLT1H LTR MaLR -447 102 43 2227 129 0 0 chr18 43331898 43332209 -42656725 + AluY SINE Alu 1 311 0 538 189 87 24 chr18 43333343 43333549 -42655385 - Charlie1 DNA MER1_type -98 2663 2445 529 221 0 29 chr18 43333551 43333687 -42655247 + MER89-int LTR ERV1 5290 5421 -1380 2801 197 44 22 chr18 43333702 43334424 -42654510 - Charlie1 DNA MER1_type -300 2461 1724 321 188 0 119 chr18 43334584 43334685 -42654249 + MER21B LTR ERV1 2 90 -773 2528 231 88 26 chr18 43334707 43335449 -42653485 + MER21B LTR ERV1 19 806 -57 1063 290 71 84 chr18 43335470 43335802 -42653132 - L3 LINE CR1 -19 1558 1223 390 91 0 0 chr18 43335802 43335857 -42653077 + (CA)n Simple_repeat Simple_repeat 1 55 0 1063 290 71 84 chr18 43335857 43336355 -42652579 - L3 LINE CR1 -354 1223 739 525 298 70 57 chr18 43336390 43336517 -42652417 + MLT1J2 LTR MaLR 42 166 -284 1363 201 20 92 chr18 43336517 43336909 -42652025 - MLT1A1 LTR MaLR -1 364 1 525 298 70 57 chr18 43336909 43337164 -42651770 + MLT1J2 LTR MaLR 166 429 -21 418 314 50 81 chr18 43337423 43337684 -42651250 + L2 LINE L2 3020 3272 0 2311 52 24 14 chr18 43337999 43338290 -42650644 - AluY SINE Alu -17 294 1 255 125 0 0 chr18 43340180 43340220 -42648714 + (CA)n Simple_repeat Simple_repeat 1 40 0 327 268 109 84 chr18 43340947 43341186 -42647748 + MIR SINE MIR 4 248 -14 253 279 0 0 chr18 43341657 43341718 -42647216 + MLT1K LTR MaLR 161 221 -367 23 0 0 0 chr18 43341994 43342017 -42646917 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr18 43346151 43346172 -42642762 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 452 254 130 51 chr18 43346528 43346705 -42642229 + MIR SINE MIR 72 262 0 199 338 0 14 chr18 43346701 43346772 -42642162 + L2 LINE L2 3203 3272 0 * 271 306 40 16 chr18 43347411 43347535 -42641399 + MIR SINE MIR 65 191 -71 394 308 154 13 chr18 43347753 43348207 -42640727 + L1ME2 LINE L1 5367 5884 -280 494 208 0 0 chr18 43348471 43348567 -42640367 + MIR3 SINE MIR 111 206 -2 2839 175 40 21 chr18 43348653 43349772 -42639162 + L1MB7 LINE L1 4741 5886 -298 1980 169 7 0 chr18 43349772 43350080 -42638854 + AluSx SINE Alu 1 310 -2 2839 175 40 21 chr18 43350080 43350094 -42638840 + L1MB7 LINE L1 5886 5898 -286 732 139 81 7 chr18 43350099 43350355 -42638579 + MLT1A1 LTR MaLR 2 353 -12 1363 163 35 7 chr18 43350362 43350644 -42638290 + L1MB7 LINE L1 5894 6183 -1 23 68 0 0 chr18 43350670 43350714 -42638220 + AT_rich Low_complexity Low_complexity 1 44 0 2315 108 0 0 chr18 43351166 43351471 -42637463 + AluSq SINE Alu 4 308 -5 292 263 150 0 chr18 43352765 43352898 -42636036 + MLT1I LTR MaLR 257 409 0 2169 130 0 0 chr18 43353888 43354196 -42634738 + AluSg SINE Alu 1 308 -2 180 287 81 23 chr18 43354609 43354696 -42634238 + MIR SINE MIR 41 132 -130 299 311 41 41 chr18 43355318 43355440 -42633494 + L2 LINE L2 3140 3261 -11 25 0 0 0 chr18 43355582 43355607 -42633327 + AT_rich Low_complexity Low_complexity 1 25 0 2220 202 36 8 chr18 43355706 43356350 -42632584 - L1MDb LINE L1 -4882 1658 994 25 0 0 0 chr18 43357214 43357239 -42631695 + AT_rich Low_complexity Low_complexity 1 25 0 637 250 136 18 chr18 43357322 43357542 -42631392 - L1MDb LINE L1 -6190 350 105 513 253 68 26 chr18 43358142 43358407 -42630527 - L1ME4a LINE L1 -206 5915 5640 632 30 0 40 chr18 43359628 43359727 -42629207 + (GGAA)n Simple_repeat Simple_repeat 4 98 0 2314 104 0 3 chr18 43359979 43360287 -42628647 - AluSg SINE Alu -3 307 1 189 354 0 0 chr18 43360601 43360649 -42628285 + L2 LINE L2 3245 3292 -21 271 279 39 39 chr18 43360705 43360809 -42628125 - MIR SINE MIR -66 142 39 213 154 0 0 chr18 43361199 43361238 -42627696 + (TATATG)n Simple_repeat Simple_repeat 3 41 0 181 229 21 0 chr18 43361328 43361376 -42627558 + MIR SINE MIR 170 218 -44 1785 193 3 0 chr18 43361575 43361875 -42627059 + AluJb SINE Alu 1 301 -11 508 211 75 31 chr18 43362001 43362162 -42626772 + MER34 LTR ERV1 373 540 -2 419 333 91 24 chr18 43362182 43362521 -42626413 + L2 LINE L2 160 521 -2793 590 235 191 9 chr18 43362523 43362753 -42626181 - ORSL DNA AcHobo -1 274 3 245 50 0 25 chr18 43362800 43362840 -42626094 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 1604 185 3 41 chr18 43364853 43365172 -42623762 + AluJb SINE Alu 3 309 -3 462 105 42 21 chr18 43365172 43365267 -42623667 + GA-rich Low_complexity Low_complexity 1 97 0 228 135 0 0 chr18 43365877 43365914 -42623020 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 437 232 105 0 chr18 43365917 43366012 -42622922 - FLAM_A SINE Alu -27 115 11 1240 221 55 12 chr18 43366030 43366462 -42622472 - MER92C LTR ERV1 -33 521 1 1308 208 96 30 chr18 43366592 43366987 -42621947 - LTR37A LTR ERV1 -4 422 2 1896 192 107 57 chr18 43367001 43367583 -42621351 - LTR36 LTR ERV1 0 611 1 2595 191 7 2 chr18 43367668 43368124 -42620810 + MLT1C LTR MaLR 10 467 0 3471 200 0 25 chr18 43368410 43369060 -42619874 + MER82 DNA MER2_type 14 647 -6 194 324 66 66 chr18 43369080 43369216 -42619718 + L2 LINE L2 3137 3272 0 2742 204 39 31 chr18 43370324 43370572 -42618362 - MER82 DNA MER2_type -1 652 407 2464 68 0 0 chr18 43370572 43370879 -42618055 - AluY SINE Alu -4 307 1 2742 204 39 31 chr18 43370879 43371276 -42617658 - MER82 DNA MER2_type -246 407 2 25 0 0 0 chr18 43372278 43372303 -42616631 + AT_rich Low_complexity Low_complexity 1 25 0 248 211 0 145 chr18 43372417 43372493 -42616441 + L2 LINE L2 3208 3272 0 232 310 124 16 chr18 43372746 43372875 -42616059 + MIR SINE MIR 64 206 -56 1351 211 33 30 chr18 43372986 43373347 -42615587 - MLT1A1 LTR MaLR 0 365 4 319 286 95 52 chr18 43373350 43373560 -42615374 - L2 LINE L2 -71 3242 3024 294 163 20 0 chr18 43373860 43373909 -42615025 - THE1A LTR MaLR -2 353 304 1708 193 0 7 chr18 43374457 43374758 -42614176 + AluJo SINE Alu 1 299 -13 382 122 40 0 chr18 43374758 43374832 -42614102 + GA-rich Low_complexity Low_complexity 1 77 0 237 311 104 37 chr18 43376105 43376269 -42612665 - L3 LINE CR1 -174 1403 1229 346 340 61 20 chr18 43376348 43376495 -42612439 - L3 LINE CR1 -351 1226 1074 2229 60 0 84 chr18 43376497 43376831 -42612103 + AluY SINE Alu 1 306 -5 269 68 0 0 chr18 43376935 43376979 -42611955 - Alu SINE Alu 0 302 259 313 318 70 8 chr18 43377119 43377248 -42611686 + MIR SINE MIR 12 148 -114 23 0 0 0 chr18 43378546 43378569 -42610365 + AT_rich Low_complexity Low_complexity 1 23 0 186 43 0 0 chr18 43379028 43379051 -42609883 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 290 250 0 22 chr18 43379056 43379148 -42609786 + L1MC4 LINE L1 6614 6703 -1339 242 292 112 0 chr18 43379184 43379273 -42609661 - L1MC5 LINE L1 -48 7913 7815 271 221 132 52 chr18 43379282 43379418 -42609516 - L1MC5 LINE L1 -185 7776 7630 1677 122 17 0 chr18 43379951 43380189 -42608745 + AluSx SINE Alu 53 294 -18 1922 111 7 0 chr18 43381120 43381390 -42607544 - AluSx SINE Alu -5 307 36 1011 187 123 77 chr18 43383562 43384001 -42604933 - L1MC5 LINE L1 -791 7170 6712 235 32 0 0 chr18 43384174 43384205 -42604729 - L1MB7 LINE L1 -19 6165 6135 316 306 131 16 chr18 43384205 43384519 -42604415 - L1M4 LINE L1 -816 5330 4981 632 303 45 25 chr18 43384689 43384933 -42604001 + MIR SINE MIR 4 252 -10 321 314 127 16 chr18 43384957 43385209 -42603725 - L1M4 LINE L1 -1357 4789 4510 408 286 97 17 chr18 43385865 43386040 -42602894 - MER5A DNA MER1_type 0 189 1 198 0 0 0 chr18 43386561 43386583 -42602351 + (T)n Simple_repeat Simple_repeat 1 22 0 7500 43 1 11 chr18 43388800 43389743 -42599191 - L1P LINE L1 -1400 4746 3813 477 214 11 11 chr18 43389762 43389851 -42599083 + MER81 DNA DNA 10 98 -16 708 269 19 39 chr18 43389905 43390255 -42598679 + MLT1J1 LTR MaLR 55 446 0 2040 139 0 0 chr18 43391325 43391620 -42597314 + AluSx SINE Alu 1 295 -17 1126 107 0 48 chr18 43391620 43391788 -42597146 + AluSg/x SINE Alu 134 293 -19 42 20 0 0 chr18 43394231 43394280 -42594654 + AT_rich Low_complexity Low_complexity 1 49 0 734 242 96 114 chr18 43394565 43395115 -42593819 + MLT1H1 LTR MaLR 1 555 0 201 281 47 31 chr18 43395178 43395242 -42593692 - L2 LINE L2 -81 3191 3127 369 243 107 35 chr18 43395282 43395451 -42593483 - L1MC4a LINE L1 -1927 5881 5701 253 318 0 35 chr18 43395874 43395959 -42592975 + MIR SINE MIR 3 84 -178 26 50 0 0 chr18 43397403 43397443 -42591491 + AT_rich Low_complexity Low_complexity 1 40 0 29 78 0 0 chr18 43397707 43397771 -42591163 + AT_rich Low_complexity Low_complexity 1 64 0 1284 188 99 11 chr18 43398870 43399152 -42589782 - AluJo SINE Alu -3 309 3 1822 189 12 6 chr18 43399257 43399600 -42589334 + MER7A DNA MER2_type 2 344 -2 22 0 0 0 chr18 43400648 43400670 -42588264 + AT_rich Low_complexity Low_complexity 1 22 0 758 164 7 21 chr18 43401033 43401173 -42587761 + FLAM_C SINE Alu 1 138 -5 22 35 0 0 chr18 43403018 43403047 -42585887 + AT_rich Low_complexity Low_complexity 1 29 0 382 326 134 23 chr18 43403414 43403721 -42585213 + L3 LINE CR1 1198 1538 -39 454 294 142 30 chr18 43404292 43404546 -42584388 + L1M4 LINE L1 4757 4981 -1165 1685 177 7 10 chr18 43404546 43404840 -42584094 + AluJo SINE Alu 1 293 -19 454 294 142 30 chr18 43404840 43405120 -42583814 + L1M4 LINE L1 4981 5351 -795 29 0 0 0 chr18 43405126 43405155 -42583779 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr18 43406335 43406363 -42582571 + AT_rich Low_complexity Low_complexity 1 28 0 227 310 0 0 chr18 43406863 43406934 -42582000 + MIR SINE MIR 186 256 -6 452 265 191 6 chr18 43407417 43407579 -42581355 - MIR SINE MIR 0 262 71 23 0 0 0 chr18 43408822 43408845 -42580089 + AT_rich Low_complexity Low_complexity 1 23 0 262 61 0 0 chr18 43409075 43409108 -42579826 + MADE1 DNA Mariner 46 78 -2 21 57 0 0 chr18 43409507 43409542 -42579392 + AT_rich Low_complexity Low_complexity 1 35 0 2020 120 7 0 chr18 43409845 43410137 -42578797 - AluSq SINE Alu -13 300 7 1986 142 73 14 chr18 43410380 43410724 -42578210 - THE1B LTR MaLR 0 364 1 377 277 277 36 chr18 43411004 43411199 -42577735 - MIR SINE MIR 0 262 21 379 343 86 43 chr18 43412220 43412544 -42576390 + L3 LINE CR1 1239 1576 -1 258 308 137 20 chr18 43412777 43412923 -42576011 + MIR3 SINE MIR 13 175 -33 787 189 0 0 chr18 43413225 43413368 -42575566 - FLAM_C SINE Alu 0 143 1 1851 151 74 3 chr18 43414897 43415222 -42573712 - MER7A DNA MER2_type 0 346 1 337 284 0 0 chr18 43415602 43415690 -42573244 - L1MC5 LINE L1 -71 7890 7803 842 171 47 39 chr18 43415693 43415910 -42573024 - MER21B LTR ERV1 -199 732 429 * 1262 234 57 88 chr18 43415909 43416363 -42572571 - MER21B LTR ERV1 -326 537 98 2238 91 0 16 chr18 43416648 43416957 -42571977 - AluY SINE Alu -7 304 1 301 315 169 29 chr18 43417127 43417578 -42571356 - L1M4 LINE L1 -1438 4708 4195 273 303 131 56 chr18 43417584 43417974 -42570960 - L1M4 LINE L1 -1999 4147 3729 660 164 36 0 chr18 43419209 43419319 -42569615 - Tigger1 DNA MER2_type 0 2418 2305 473 216 40 23 chr18 43419378 43419554 -42569380 + (TTATG)n Simple_repeat Simple_repeat 1 179 0 12576 153 49 9 chr18 43419567 43420158 -42568776 - Tigger1 DNA MER2_type -149 2269 1703 2028 116 0 0 chr18 43420158 43420435 -42568499 - AluSx SINE Alu -15 297 21 12576 153 49 9 chr18 43420435 43422025 -42566909 - Tigger1 DNA MER2_type -715 1703 2 562 254 32 53 chr18 43422943 43423132 -42565802 - MIR SINE MIR -12 250 66 636 296 104 9 chr18 43423555 43423785 -42565149 + MIR SINE MIR 11 262 0 713 133 9 5 chr18 43423816 43424023 -42564911 + AluSx SINE Alu 4 306 -3 1967 107 45 0 chr18 43424181 43424471 -42564463 - AluSx SINE Alu -9 303 1 526 224 46 17 chr18 43424471 43424645 -42564289 + MER113 DNA MER1_type? 70 248 -273 1646 180 22 35 chr18 43426807 43427118 -42561816 - AluJb SINE Alu -3 309 3 964 256 35 17 chr18 43427681 43427911 -42561023 - MIR SINE MIR 0 262 29 1506 164 27 14 chr18 43428568 43428861 -42560073 - L1MB7 LINE L1 -2 6182 5886 23 0 0 0 chr18 43429506 43429529 -42559405 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr18 43429745 43429784 -42559150 + AT_rich Low_complexity Low_complexity 1 39 0 200 273 61 0 chr18 43431023 43431089 -42557845 + MIR3 SINE MIR 133 202 -6 188 65 0 32 chr18 43431438 43431469 -42557465 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 24 96 0 0 chr18 43431510 43431583 -42557351 + AT_rich Low_complexity Low_complexity 1 73 0 822 251 10 0 chr18 43433282 43433489 -42555445 - MER3 DNA MER1_type 0 209 1 2219 101 0 3 chr18 43433700 43433998 -42554936 - AluY SINE Alu -14 297 1 542 318 100 25 chr18 43434511 43434750 -42554184 + MIR SINE MIR 6 262 0 248 405 0 0 chr18 43434828 43434912 -42554022 - MIR SINE MIR -130 132 49 1986 110 39 0 chr18 43435498 43435779 -42553155 - AluSx SINE Alu -18 294 3 206 0 69 0 chr18 43435945 43435974 -42552960 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1368 204 26 0 chr18 43435976 43436245 -42552689 - AluJo SINE Alu -30 282 7 753 157 7 57 chr18 43436937 43437077 -42551857 + FLAM_A SINE Alu 1 133 0 1336 206 55 0 chr18 43437079 43437351 -42551583 + MER68 LTR ERV1 6 292 -270 225 0 0 0 chr18 43437872 43437897 -42551037 + (TTA)n Simple_repeat Simple_repeat 1 25 0 599 189 0 0 chr18 43438559 43438665 -42550269 + FLAM_C SINE Alu 35 140 -3 2006 101 0 79 chr18 43439669 43439987 -42548947 + AluSx SINE Alu 1 293 -19 42 20 0 0 chr18 43442431 43442480 -42546454 + AT_rich Low_complexity Low_complexity 1 49 0 734 242 96 114 chr18 43442765 43443315 -42545619 + MLT1H1 LTR MaLR 1 555 0 201 281 47 31 chr18 43443378 43443442 -42545492 - L2 LINE L2 -81 3191 3127 369 243 107 35 chr18 43443482 43443651 -42545283 - L1MC4a LINE L1 -1927 5881 5701 253 318 0 35 chr18 43444074 43444159 -42544775 + MIR SINE MIR 3 84 -178 26 50 0 0 chr18 43445598 43445638 -42543296 + AT_rich Low_complexity Low_complexity 1 40 0 29 78 0 0 chr18 43445902 43445966 -42542968 + AT_rich Low_complexity Low_complexity 1 64 0 1284 188 99 11 chr18 43447073 43447355 -42541579 - AluJo SINE Alu -3 309 3 1853 184 12 6 chr18 43447459 43447802 -42541132 + MER7A DNA MER2_type 2 344 -2 22 0 0 0 chr18 43448848 43448870 -42540064 + AT_rich Low_complexity Low_complexity 1 22 0 758 164 7 21 chr18 43449234 43449374 -42539560 + FLAM_C SINE Alu 1 138 -5 22 35 0 0 chr18 43451219 43451248 -42537686 + AT_rich Low_complexity Low_complexity 1 29 0 365 322 141 23 chr18 43451618 43451922 -42537012 + L3 LINE CR1 1199 1538 -39 454 294 142 30 chr18 43452493 43452747 -42536187 + L1M4 LINE L1 4757 4981 -1165 1685 177 7 10 chr18 43452747 43453041 -42535893 + AluJo SINE Alu 1 293 -19 454 294 142 30 chr18 43453041 43453321 -42535613 + L1M4 LINE L1 4981 5351 -795 29 0 0 0 chr18 43453327 43453356 -42535578 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr18 43454536 43454564 -42534370 + AT_rich Low_complexity Low_complexity 1 28 0 227 310 0 0 chr18 43455064 43455135 -42533799 + MIR SINE MIR 186 256 -6 452 265 191 6 chr18 43455618 43455780 -42533154 - MIR SINE MIR 0 262 71 23 0 0 0 chr18 43457023 43457046 -42531888 + AT_rich Low_complexity Low_complexity 1 23 0 262 61 0 0 chr18 43457276 43457309 -42531625 + MADE1 DNA Mariner 46 78 -2 21 57 0 0 chr18 43457708 43457743 -42531191 + AT_rich Low_complexity Low_complexity 1 35 0 2020 120 7 0 chr18 43458046 43458338 -42530596 - AluSq SINE Alu -13 300 7 1986 142 73 14 chr18 43458581 43458925 -42530009 - THE1B LTR MaLR 0 364 1 377 277 277 36 chr18 43459205 43459400 -42529534 - MIR SINE MIR 0 262 21 379 343 86 43 chr18 43460421 43460745 -42528189 + L3 LINE CR1 1239 1576 -1 258 308 137 20 chr18 43460978 43461124 -42527810 + MIR3 SINE MIR 13 175 -33 787 189 0 0 chr18 43461426 43461569 -42527365 - FLAM_C SINE Alu 0 143 1 1851 151 74 3 chr18 43463099 43463424 -42525510 - MER7A DNA MER2_type 0 346 1 337 284 0 0 chr18 43463804 43463892 -42525042 - L1MC5 LINE L1 -71 7890 7803 842 171 47 39 chr18 43463895 43464112 -42524822 - MER21B LTR ERV1 -199 732 429 * 1273 236 57 86 chr18 43464111 43464564 -42524370 - MER21B LTR ERV1 -326 537 98 2224 93 0 16 chr18 43464849 43465159 -42523775 - AluY SINE Alu -6 305 1 21 0 0 0 chr18 43465338 43465359 -42523575 + AT_rich Low_complexity Low_complexity 1 21 0 260 272 39 19 chr18 43465786 43465889 -42523045 - L1M4 LINE L1 -1999 4147 4043 660 164 36 0 chr18 43467411 43467521 -42521413 - Tigger1 DNA MER2_type 0 2418 2305 320 227 39 23 chr18 43467580 43467708 -42521226 + (TTATG)n Simple_repeat Simple_repeat 5 134 0 12639 154 47 9 chr18 43467709 43468300 -42520634 - Tigger1 DNA MER2_type -149 2269 1702 2028 116 0 0 chr18 43468300 43468577 -42520357 - AluSx SINE Alu -15 297 21 12639 154 47 9 chr18 43468577 43470169 -42518765 - Tigger1 DNA MER2_type -716 1702 2 562 254 32 53 chr18 43471086 43471275 -42517659 - MIR SINE MIR -12 250 66 636 296 104 9 chr18 43471698 43471928 -42517006 + MIR SINE MIR 11 262 0 713 133 9 5 chr18 43471959 43472166 -42516768 + AluSx SINE Alu 4 306 -3 213 39 0 0 chr18 43472417 43472443 -42516491 + (A)n Simple_repeat Simple_repeat 1 26 0 212 325 201 13 chr18 43472610 43472764 -42516170 - MIR SINE MIR -30 232 50 217 402 0 28 chr18 43472827 43472934 -42516000 - MIR SINE MIR -74 134 31 283 232 141 10 chr18 43473367 43473413 -42515521 + MER103 DNA DNA 8 47 -119 261 0 0 0 chr18 43473413 43473442 -42515492 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 283 232 141 10 chr18 43473442 43473494 -42515440 + MER103 DNA DNA 47 119 -47 198 91 0 0 chr18 43474615 43474648 -42514286 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 414 270 9 27 chr18 43474648 43474759 -42514175 - L2 LINE L2 -14 3299 3191 592 306 24 29 chr18 43474809 43475018 -42513916 - L2 LINE L2 -302 3011 2804 205 250 0 33 chr18 43475055 43475115 -42513819 - L2 LINE L2 -719 2595 2538 610 286 112 50 chr18 43475571 43476135 -42512799 - L1M4 LINE L1 -3405 2741 2143 1690 329 238 14 chr18 43476877 43478489 -42510445 + L2 LINE L2 946 2917 -397 201 278 78 35 chr18 43478563 43478678 -42510256 + L2 LINE L2 3151 3270 -43 187 100 0 0 chr18 43479307 43479337 -42509597 - MIR SINE MIR -120 142 113 1217 186 35 0 chr18 43479915 43480141 -42508793 + MER46A DNA MER2_type 1 234 -2 2503 82 12 0 chr18 43480347 43480688 -42508246 - L1PA6 LINE L1 0 6154 5810 27 29 0 0 chr18 43481262 43481296 -42507638 + AT_rich Low_complexity Low_complexity 1 34 0 2142 122 3 0 chr18 43482646 43482941 -42505993 - AluSp SINE Alu -16 297 2 2400 66 0 28 chr18 43483001 43483319 -42505615 - AluY SINE Alu -2 309 1 370 250 30 91 chr18 43484054 43484186 -42504748 - L2 LINE L2 -2 3311 3188 226 402 62 0 chr18 43484340 43484437 -42504497 + MIR SINE MIR 21 123 -85 345 251 106 39 chr18 43484464 43484643 -42504291 - MER112 DNA MER1_type -2 258 68 1319 199 83 0 chr18 43484667 43484944 -42503990 - AluJo SINE Alu -12 300 1 1341 224 43 9 chr18 43485773 43485857 -42503077 + MER58B DNA MER1_type 4 84 -2336 2113 124 0 3 chr18 43485857 43486163 -42502771 - AluSx SINE Alu -7 305 1 1341 224 43 9 chr18 43486163 43486404 -42502530 + MER58B DNA MER1_type 84 340 -1 295 284 43 57 chr18 43486849 43486990 -42501944 + MIR SINE MIR 54 192 -70 2290 101 7 0 chr18 43487742 43488048 -42500886 - AluSx SINE Alu -4 308 1 728 261 63 22 chr18 43488073 43488295 -42500639 - MIR SINE MIR -28 234 4 337 295 150 35 chr18 43488323 43488496 -42500438 - MIR3 SINE MIR -6 202 10 1642 141 38 38 chr18 43489631 43489922 -42499012 - AluSx SINE Alu -21 291 1 1494 257 40 31 chr18 43490040 43490797 -42498137 - L2 LINE L2 -15 3298 2543 387 0 0 0 chr18 43490830 43490873 -42498061 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 752 201 0 0 chr18 43492419 43492558 -42496376 - FLAM_C SINE Alu -3 140 2 368 261 62 62 chr18 43493144 43493320 -42495614 + MER112 DNA MER1_type 81 256 -4 22 0 0 0 chr18 43493666 43493688 -42495246 + AT_rich Low_complexity Low_complexity 1 22 0 301 338 52 7 chr18 43494455 43494591 -42494343 - L1MC4 LINE L1 -17 8025 7884 203 243 0 0 chr18 43494962 43494999 -42493935 - MIR SINE MIR -60 148 112 2115 163 17 0 chr18 43495013 43495368 -42493566 + MER46B DNA MER2_type 1 236 0 309 369 113 18 chr18 43495473 43495695 -42493239 - MIR SINE MIR 0 262 20 211 173 0 39 chr18 43496540 43496555 -42492379 + (CTTAA)n Simple_repeat Simple_repeat 3 17 -35 2108 112 3 7 chr18 43496555 43496849 -42492085 - AluSx SINE Alu -19 293 1 211 173 0 39 chr18 43496849 43496885 -42492049 + (CTTAA)n Simple_repeat Simple_repeat 17 52 0 204 205 0 0 chr18 43497182 43497221 -42491713 + CT-rich Low_complexity Low_complexity 4 42 0 225 108 0 0 chr18 43497310 43497347 -42491587 + (CA)n Simple_repeat Simple_repeat 2 38 0 318 336 104 43 chr18 43497522 43497903 -42491031 + L2 LINE L2 2625 3029 -243 1442 129 4 18 chr18 43499191 43499416 -42489518 + AluSg/x SINE Alu 86 307 -5 301 259 96 7 chr18 43499457 43499592 -42489342 - L1MC/D LINE L1 -1994 5814 5668 24 32 0 0 chr18 43499748 43499779 -42489155 + AT_rich Low_complexity Low_complexity 1 31 0 401 281 18 18 chr18 43500013 43500127 -42488807 + MIR SINE MIR 1 114 -148 1846 228 69 37 chr18 43500128 43500663 -42488271 + MER68 LTR ERV1 3 554 -8 183 262 49 16 chr18 43500686 43500747 -42488187 + MIR SINE MIR 121 183 -79 430 222 33 46 chr18 43501074 43501270 -42487664 - L1MC/D LINE L1 -731 5431 5238 2194 90 21 0 chr18 43501306 43501596 -42487338 - AluSc SINE Alu -13 296 1 194 0 39 0 chr18 43501656 43501682 -42487252 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1586 181 0 46 chr18 43502598 43502924 -42486010 - AluJb SINE Alu 0 312 2 23 33 0 0 chr18 43502927 43502957 -42485977 + AT_rich Low_complexity Low_complexity 1 30 0 369 248 128 75 chr18 43503617 43503975 -42484959 - MLT1H1 LTR MaLR -171 371 1 461 239 156 60 chr18 43505723 43505890 -42483044 + MER5A DNA MER1_type 1 183 -6 669 300 22 6 chr18 43505893 43506073 -42482861 - MER5A DNA MER1_type -6 183 1 737 244 91 10 chr18 43506081 43506278 -42482656 - MER58A DNA MER1_type 0 224 12 252 229 71 0 chr18 43506827 43506897 -42482037 - MARNA DNA Mariner -117 469 395 2319 83 3 0 chr18 43507897 43508198 -42480736 + AluSp SINE Alu 1 302 -11 300 347 24 83 chr18 43508217 43508554 -42480380 - L3 LINE CR1 0 1577 1261 652 350 57 21 chr18 43508567 43508950 -42479984 + L2 LINE L2 2215 2611 -703 502 298 92 44 chr18 43509017 43509245 -42479689 + L2 LINE L2 2908 3146 -167 337 209 209 11 chr18 43509260 43509351 -42479583 - L2 LINE L2 -5 3308 3200 382 293 45 23 chr18 43509363 43509496 -42479438 + L2 LINE L2 3176 3311 -2 26 0 0 27 chr18 43510059 43510072 -42478862 + AT_rich Low_complexity Low_complexity 1 13 -23 1000 25 0 0 chr18 43510072 43510193 -42478741 + L1PA4 LINE L1 6035 6155 0 26 0 0 27 chr18 43510193 43510216 -42478718 + AT_rich Low_complexity Low_complexity 13 36 0 183 129 0 0 chr18 43510355 43510386 -42478548 + (TG)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr18 43510811 43510832 -42478102 + AT_rich Low_complexity Low_complexity 1 21 0 3286 81 12 0 chr18 43512302 43512732 -42476202 - MLT2A1 LTR ERVL -9 435 1 480 305 105 17 chr18 43512800 43513039 -42475895 + MIR SINE MIR 1 260 -2 1193 199 88 4 chr18 43513179 43513430 -42475504 + MSTB1 LTR MaLR 1 272 -160 23 0 0 0 chr18 43514689 43514712 -42474222 + AT_rich Low_complexity Low_complexity 1 23 0 186 219 329 0 chr18 43517233 43517306 -42471628 - MER5A DNA MER1_type -72 117 21 1699 174 7 26 chr18 43517930 43518234 -42470700 - AluJo SINE Alu -14 298 1 2126 127 0 29 chr18 43518647 43518961 -42469973 + AluSx SINE Alu 1 305 -7 2130 117 3 0 chr18 43519459 43519750 -42469184 + AluSx SINE Alu 1 292 -20 466 285 24 24 chr18 43520088 43520253 -42468681 - MER5B DNA MER1_type -12 166 2 23 0 0 0 chr18 43520397 43520420 -42468514 + AT_rich Low_complexity Low_complexity 1 23 0 1447 114 36 0 chr18 43520500 43520719 -42468215 - MER30 DNA MER1_type -3 227 1 703 296 113 31 chr18 43520745 43521127 -42467807 + L2 LINE L2 2131 2543 -771 531 263 54 67 chr18 43521311 43521551 -42467383 + L2 LINE L2 3077 3313 0 204 40 0 0 chr18 43521893 43521918 -42467016 + (TTA)n Simple_repeat Simple_repeat 3 27 0 891 241 84 57 chr18 43523187 43523713 -42465221 + L1ME LINE L1 444 983 -5087 210 394 67 6 chr18 43524678 43524858 -42464076 + MIR SINE MIR 71 261 -1 2494 76 0 0 chr18 43526828 43527132 -42461802 + AluY SINE Alu 1 304 -7 185 364 39 54 chr18 43527495 43527624 -42461310 - MIR SINE MIR -66 142 15 593 283 25 46 chr18 43527998 43528235 -42460699 - MLT1H1 LTR MaLR -2 553 322 343 244 47 12 chr18 43528362 43528448 -42460486 - MLT1H1 LTR MaLR -401 148 60 220 188 59 0 chr18 43528748 43528800 -42460134 + MIR SINE MIR 87 144 -64 271 233 0 17 chr18 43529531 43529591 -42459343 - MIR SINE MIR -98 164 106 2301 101 0 16 chr18 43529597 43529914 -42459020 + AluSx SINE Alu 1 312 0 1584 173 4 18 chr18 43530717 43530994 -42457940 - AluJo SINE Alu -39 273 1 22 0 0 0 chr18 43531879 43531901 -42457033 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr18 43533459 43533488 -42455446 + AT_rich Low_complexity Low_complexity 1 29 0 399 223 91 25 chr18 43533645 43533766 -42455168 - MIR SINE MIR -16 246 118 233 172 16 0 chr18 43533842 43533906 -42455028 + (TA)n Simple_repeat Simple_repeat 2 66 0 1238 122 66 5 chr18 43533934 43534147 -42454787 - Tigger1 DNA MER2_type -1303 1115 890 641 158 17 8 chr18 43534130 43534250 -42454684 - Tigger1 DNA MER2_type -1425 993 873 * 359 169 0 13 chr18 43534251 43534328 -42454606 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 14100 121 53 14 chr18 43535070 43536153 -42452781 - Tigger1 DNA MER2_type -1 2417 1378 2820 13 0 3 chr18 43536153 43536464 -42452470 + AluYb8 SINE Alu 1 310 -8 14100 121 53 14 chr18 43536464 43537702 -42451232 - Tigger1 DNA MER2_type -1040 1378 4 468 111 0 0 chr18 43538000 43538081 -42450853 + (TG)n Simple_repeat Simple_repeat 1 81 0 232 232 0 18 chr18 43538132 43538188 -42450746 + L2 LINE L2 3246 3300 -13 377 321 119 54 chr18 43538693 43539029 -42449905 - L3 LINE CR1 -374 1203 846 405 259 0 18 chr18 43540768 43540880 -42448054 - MER58B DNA MER1_type 0 341 232 481 330 109 17 chr18 43541671 43541901 -42447033 - MIR SINE MIR 0 262 12 384 165 24 0 chr18 43542547 43542632 -42446302 + L1MC3 LINE L1 7535 7621 -164 206 257 297 0 chr18 43542657 43542758 -42446176 + L3 LINE CR1 1402 1532 -45 286 276 181 8 chr18 43542806 43542933 -42446001 + MER5A DNA MER1_type 38 186 -3 248 226 97 32 chr18 43543453 43543546 -42445388 + MLT1H LTR MaLR 449 547 -2 1845 134 0 38 chr18 43543864 43543984 -42444950 + AluJb SINE Alu 13 136 -176 213 39 0 0 chr18 43543984 43544010 -42444924 + (TG)n Simple_repeat Simple_repeat 1 26 0 1845 134 0 38 chr18 43544010 43544181 -42444753 + AluJb SINE Alu 136 293 -19 497 233 12 74 chr18 43544221 43544384 -42444550 + L2 LINE L2 67 219 -3095 3913 105 58 3 chr18 43544414 43545015 -42443919 + MER41B LTR ERV1 1 634 -1 3401 116 73 58 chr18 43545121 43545724 -42443210 - LTR9 LTR ERV1 0 612 1 818 204 63 31 chr18 43545934 43546222 -42442712 + L1ME1 LINE L1 5562 5860 -306 631 203 101 39 chr18 43546713 43546920 -42442014 - LTR45 LTR ERV1 -2 523 304 241 269 118 11 chr18 43546947 43547040 -42441894 - MER72 LTR ERV1 -243 479 377 792 147 42 7 chr18 43549708 43549851 -42439083 - MLT1D LTR MaLR -3 502 355 813 155 0 28 chr18 43549867 43550009 -42438925 - MER4D LTR ERV1 -21 882 745 * 1488 177 34 10 chr18 43550005 43550299 -42438635 - MER4D LTR ERV1 -81 822 522 512 84 0 0 chr18 43550307 43550390 -42438544 - L1PB3 LINE L1 -1 6153 6071 589 210 276 27 chr18 43550390 43550647 -42438287 - MLT1D LTR MaLR -157 348 28 1384 141 4 45 chr18 43552172 43552414 -42436520 + MER46A DNA MER2_type 5 236 0 560 261 68 11 chr18 43552431 43552607 -42436327 + L2 LINE L2 2046 2231 -1083 1548 252 66 18 chr18 43552607 43553000 -42435934 + MER45B DNA AcHobo 1 412 -628 560 342 4 29 chr18 43553561 43553801 -42435133 + MIR SINE MIR 2 235 -27 1142 340 72 41 chr18 43553849 43554926 -42434008 - L2 LINE L2 -2 3311 2196 3629 198 43 55 chr18 43554931 43556399 -42432535 + L1MB8 LINE L1 4656 6091 -87 22 70 0 0 chr18 43556399 43556442 -42432492 + AT_rich Low_complexity Low_complexity 1 43 0 194 300 0 0 chr18 43556510 43556550 -42432384 + L2 LINE L2 3137 3176 -96 21 0 0 0 chr18 43557553 43557574 -42431360 + AT_rich Low_complexity Low_complexity 1 21 0 217 298 77 10 chr18 43557813 43557917 -42431017 - MIR3 SINE MIR -39 169 59 237 273 55 0 chr18 43558021 43558076 -42430858 + MIR3 SINE MIR 126 183 -25 471 242 38 15 chr18 43558583 43558715 -42430219 + MLT1K LTR MaLR 454 588 0 1184 153 30 5 chr18 43558880 43559082 -42429852 - MLT1A1 LTR MaLR 0 365 159 2357 107 0 0 chr18 43559879 43560189 -42428745 + AluSg SINE Alu 1 310 0 245 264 121 11 chr18 43560842 43560933 -42428001 + MIR3 SINE MIR 65 165 -43 1040 239 41 82 chr18 43561057 43561200 -42427734 - MLT2C1 LTR ERVL 0 397 250 2264 109 3 6 chr18 43561200 43561511 -42427423 + AluSg SINE Alu 1 310 0 1040 239 41 82 chr18 43561511 43561781 -42427153 - MLT2C1 LTR ERVL -147 250 1 621 319 161 29 chr18 43561860 43562555 -42426379 + L2 LINE L2 1938 2724 -590 1570 38 113 5 chr18 43562585 43562798 -42426136 + L1PA5 LINE L1 5912 6147 -7 22 35 0 0 chr18 43562798 43562827 -42426107 + AT_rich Low_complexity Low_complexity 1 29 0 664 177 23 0 chr18 43562917 43563047 -42425887 - FLAM_A SINE Alu 0 133 1 368 302 62 47 chr18 43563047 43563305 -42425629 + L2 LINE L2 2927 3188 -125 679 197 8 0 chr18 43564863 43564990 -42423944 + MIR SINE MIR 134 261 -1 228 143 0 0 chr18 43566832 43566874 -42422060 + (TG)n Simple_repeat Simple_repeat 1 42 0 4237 136 43 11 chr18 43567456 43567688 -42421246 - L1MA4 LINE L1 -11 6289 6066 2190 87 0 14 chr18 43567688 43567980 -42420954 - AluSg SINE Alu -22 288 4 4237 136 43 11 chr18 43567980 43568510 -42420424 - L1MA4 LINE L1 -234 6066 5502 431 287 29 7 chr18 43568846 43568982 -42419952 + MIR SINE MIR 8 146 -116 1485 221 23 26 chr18 43569362 43569711 -42419223 - LTR40b LTR ERVL 0 462 115 3906 142 167 20 chr18 43569719 43570705 -42418229 + MER11B LTR ERVK 1 1236 0 679 222 65 0 chr18 43570705 43570856 -42418078 - LTR40a LTR ERVL -352 167 7 2447 127 6 3 chr18 43570969 43571330 -42417604 - THE1B LTR MaLR 0 364 3 246 201 328 45 chr18 43571476 43571610 -42417324 - MIR SINE MIR -10 252 81 208 362 70 9 chr18 43572456 43572596 -42416338 - MIR SINE MIR -66 142 16 4720 147 52 42 chr18 43573349 43573470 -42415464 - L1MC2 LINE L1 -11 6333 6215 2359 135 8 3 chr18 43573470 43573832 -42415102 - THE1B LTR MaLR 0 364 1 4720 147 52 42 chr18 43573832 43574844 -42414090 - L1MC2 LINE L1 -129 6215 5188 296 343 9 0 chr18 43574986 43575091 -42413843 + MIR3 SINE MIR 98 203 -5 995 123 12 53 chr18 43575624 43575795 -42413139 - AluSg/x SINE Alu -15 297 134 2120 136 0 0 chr18 43575795 43576090 -42412844 - AluSx SINE Alu -17 295 1 635 188 26 51 chr18 43577160 43577510 -42411424 - MLT1J1 LTR MaLR 0 446 54 451 214 11 11 chr18 43577564 43577653 -42411281 - MER81 DNA DNA -16 98 10 12688 44 2 1 chr18 43577672 43580015 -42408919 + L1PA5 LINE L1 3813 6146 -8 31 58 0 0 chr18 43580015 43580067 -42408867 + AT_rich Low_complexity Low_complexity 1 52 0 17096 194 44 23 chr18 43580150 43582391 -42406543 - L1PA16 LINE L1 -1 6868 4675 1814 152 122 57 chr18 43582391 43582751 -42406183 + MSTA LTR MaLR 1 391 -37 2118 151 0 0 chr18 43582751 43583056 -42405878 - AluSx SINE Alu -7 305 1 1814 152 122 57 chr18 43583056 43583097 -42405837 + MSTA LTR MaLR 391 428 0 17096 194 44 23 chr18 43583097 43583469 -42405465 - L1PA16 LINE L1 -2194 4675 4312 237 65 0 0 chr18 43583469 43583500 -42405434 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 17096 194 44 23 chr18 43583500 43585888 -42403046 - L1PA16 LINE L1 -2557 4312 1681 1909 148 3 59 chr18 43585888 43586030 -42402904 + MER1B DNA MER1_type 1 149 -2561 2341 65 0 50 chr18 43586030 43586351 -42402583 - AluY SINE Alu -6 305 1 1909 148 3 59 chr18 43586351 43586565 -42402369 + MER1B DNA MER1_type 149 337 0 17096 194 44 23 chr18 43586565 43588281 -42400653 - L1PA16 LINE L1 -5188 1681 2 245 294 92 17 chr18 43588353 43588472 -42400462 - MIR3 SINE MIR -10 198 71 1309 183 10 112 chr18 43588473 43588866 -42400068 + MLT1A1 LTR MaLR 1 353 -12 261 265 29 0 chr18 43589130 43589198 -42399736 - L2 LINE L2 -3 3269 3200 608 276 72 56 chr18 43590972 43591363 -42397571 - LTR37B LTR ERV1 -64 404 8 207 298 30 15 chr18 43591864 43591995 -42396939 + A-rich Low_complexity Low_complexity 1 133 0 1205 108 32 11 chr18 43592089 43592274 -42396660 + L1MC/D LINE L1 5432 5620 -713 364 239 74 61 chr18 43592310 43592524 -42396410 - MLT1A1 LTR MaLR -137 228 1 1235 130 19 5 chr18 43592524 43592732 -42396202 + L1MC1 LINE L1 5614 5824 -509 6122 189 20 2 chr18 43592732 43594840 -42394094 + L1PA13 LINE L1 4023 6160 -3 2593 157 39 18 chr18 43594840 43595118 -42393816 + L1MC1 LINE L1 5813 6107 -226 1254 220 97 78 chr18 43595118 43595646 -42393288 + MER34 LTR ERV1 1 538 -4 2593 157 39 18 chr18 43595646 43595859 -42393075 + L1MC1 LINE L1 6107 6314 -19 489 68 0 27 chr18 43596358 43596432 -42392502 + L1PA10 LINE L1 6093 6164 -4 28 48 0 0 chr18 43597280 43597322 -42391612 + AT_rich Low_complexity Low_complexity 1 42 0 2368 89 3 3 chr18 43597683 43597985 -42390949 + AluSc SINE Alu 1 302 -7 2934 190 55 2 chr18 43598060 43598677 -42390257 - L1MB5 LINE L1 -14 6160 5511 2369 85 0 0 chr18 43598986 43599281 -42389653 - AluY SINE Alu -16 295 1 476 275 133 34 chr18 43599385 43599851 -42389083 + HAL1 LINE L1 1701 2212 -295 663 266 87 60 chr18 43599956 43600397 -42388537 - MLT1G1 LTR MaLR 0 555 1 207 100 0 0 chr18 43600608 43600638 -42388296 + (A)n Simple_repeat Simple_repeat 1 30 0 250 264 121 11 chr18 43601286 43601377 -42387557 + MIR3 SINE MIR 65 165 -43 1010 239 41 82 chr18 43601501 43601644 -42387290 - MLT2C1 LTR ERVL 0 397 250 2295 109 3 6 chr18 43601644 43601955 -42386979 + AluSg SINE Alu 1 310 0 1010 239 41 82 chr18 43601955 43602225 -42386709 - MLT2C1 LTR ERVL -147 250 1 768 323 159 21 chr18 43602304 43603009 -42385925 + L2 LINE L2 1938 2739 -575 1680 19 113 0 chr18 43603025 43603237 -42385697 + L1PA5 LINE L1 5912 6147 -7 22 35 0 0 chr18 43603237 43603266 -42385668 + AT_rich Low_complexity Low_complexity 1 29 0 673 177 23 0 chr18 43603357 43603487 -42385447 - FLAM_A SINE Alu 0 133 1 371 302 62 47 chr18 43603487 43603745 -42385189 + L2 LINE L2 2927 3188 -125 674 197 8 0 chr18 43605303 43605430 -42383504 + MIR SINE MIR 134 261 -1 228 143 0 0 chr18 43607272 43607314 -42381620 + (TG)n Simple_repeat Simple_repeat 1 42 0 4237 136 43 11 chr18 43607896 43608128 -42380806 - L1MA4 LINE L1 -11 6289 6066 2169 92 0 14 chr18 43608128 43608420 -42380514 - AluSg SINE Alu -22 288 1 4237 136 43 11 chr18 43608420 43608950 -42379984 - L1MA4 LINE L1 -234 6066 5502 431 287 29 7 chr18 43609286 43609422 -42379512 + MIR SINE MIR 8 146 -116 1485 221 23 26 chr18 43609802 43610151 -42378783 - LTR40b LTR ERVL 0 462 115 3906 142 167 20 chr18 43610159 43611145 -42377789 + MER11B LTR ERVK 1 1236 0 679 222 65 0 chr18 43611145 43611296 -42377638 - LTR40a LTR ERVL -352 167 7 2447 127 6 3 chr18 43611409 43611770 -42377164 - THE1B LTR MaLR 0 364 3 246 201 328 45 chr18 43611916 43612050 -42376884 - MIR SINE MIR -10 252 81 208 362 70 9 chr18 43612896 43613036 -42375898 - MIR SINE MIR -66 142 16 4719 148 52 42 chr18 43613789 43613910 -42375024 - L1MC2 LINE L1 -11 6333 6215 2359 135 8 3 chr18 43613910 43614272 -42374662 - THE1B LTR MaLR 0 364 1 4719 148 52 42 chr18 43614272 43615284 -42373650 - L1MC2 LINE L1 -129 6215 5188 296 343 9 0 chr18 43615426 43615531 -42373403 + MIR3 SINE MIR 98 203 -5 1731 121 10 49 chr18 43616064 43616369 -42372565 - AluSg SINE Alu -17 293 1 1980 144 43 0 chr18 43616768 43617104 -42371830 + AluSx SINE Alu 1 349 0 464 368 62 24 chr18 43617431 43617896 -42371038 - L1MEc LINE L1 -4579 1817 1335 1158 204 82 11 chr18 43617897 43618250 -42370684 - L1MEc LINE L1 -2989 3226 2849 811 240 73 28 chr18 43618242 43618667 -42370267 - L1MEc LINE L1 -4942 1454 1011 * 3605 200 89 56 chr18 43618730 43618888 -42370046 - L1MDa LINE L1 -4014 2526 2375 1826 169 3 23 chr18 43618888 43619190 -42369744 - AluJo SINE Alu -12 300 5 3605 200 89 56 chr18 43619190 43620499 -42368435 - L1MDa LINE L1 -4165 2375 1011 291 315 16 75 chr18 43620716 43620970 -42367964 - L1MDa LINE L1 -5981 559 321 403 233 140 13 chr18 43620971 43621121 -42367813 - L1MDa LINE L1 -6294 246 78 405 240 129 0 chr18 43621122 43621293 -42367641 - L1MEc LINE L1 -5452 944 752 3690 88 58 0 chr18 43621334 43621865 -42367069 - L1PA10 LINE L1 -8 6160 5599 8861 120 21 3 chr18 43621865 43623607 -42365327 + L1PA10 LINE L1 3854 5622 -546 1997 260 67 29 chr18 43623626 43624327 -42364607 - L1MEc LINE L1 -5633 763 36 275 255 75 53 chr18 43624754 43624848 -42364086 - MIR3 SINE MIR -3 205 110 225 83 0 0 chr18 43625765 43625801 -42363133 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 24 0 0 0 chr18 43626353 43626377 -42362557 + GC_rich Low_complexity Low_complexity 1 24 0 216 0 0 0 chr18 43626398 43626422 -42362512 + (A)n Simple_repeat Simple_repeat 1 24 0 371 20 0 20 chr18 43627909 43627958 -42360976 + (TC)n Simple_repeat Simple_repeat 1 48 0 243 0 0 0 chr18 43627957 43627984 -42360950 + (CA)n Simple_repeat Simple_repeat 1 27 0 * 388 303 18 9 chr18 43628058 43628167 -42360767 + L2 LINE L2 3160 3269 -3 199 354 73 10 chr18 43628168 43628264 -42360670 - MIR3 SINE MIR -49 159 58 352 339 77 8 chr18 43629244 43629374 -42359560 + MIR3 SINE MIR 21 159 -49 512 304 17 39 chr18 43629375 43629556 -42359378 - MER5B DNA MER1_type 0 178 2 239 234 0 0 chr18 43629556 43629587 -42359347 + MIR3 SINE MIR 168 198 -10 1285 264 36 36 chr18 43629975 43630425 -42358509 + LTR16B LTR ERVL 9 458 -6 23 33 0 0 chr18 43630839 43630869 -42358065 + AT_rich Low_complexity Low_complexity 1 30 0 243 195 49 0 chr18 43630905 43630987 -42357947 + (TA)n Simple_repeat Simple_repeat 1 86 0 233 381 32 32 chr18 43632347 43632473 -42356461 + MIR3 SINE MIR 9 134 -74 453 345 25 20 chr18 43633034 43633237 -42355697 - MIR3 SINE MIR 0 208 5 251 254 51 109 chr18 43635169 43635307 -42353627 + L3 LINE CR1 1363 1492 -85 5854 127 28 3 chr18 43635372 43636305 -42352629 - HSMAR2 DNA Mariner -3 1299 344 314 259 12 25 chr18 43636309 43636390 -42352544 - MIR SINE MIR -177 85 6 464 261 0 9 chr18 43636449 43636564 -42352370 - Charlie8 DNA MER1_type -2161 256 143 252 86 0 0 chr18 43636772 43636807 -42352127 + (CA)n Simple_repeat Simple_repeat 2 36 0 355 303 136 0 chr18 43636985 43637140 -42351794 + MLT1H1 LTR MaLR 1 176 -379 408 270 82 40 chr18 43637158 43637421 -42351513 + MLT1H1 LTR MaLR 320 555 0 23 0 0 0 chr18 43640168 43640191 -42348743 + AT_rich Low_complexity Low_complexity 1 23 0 30 0 0 0 chr18 43640213 43640243 -42348691 + AT_rich Low_complexity Low_complexity 1 30 0 183 280 144 42 chr18 43641641 43641687 -42347247 + MIR SINE MIR 118 158 -104 1673 201 47 59 chr18 43641687 43642159 -42346775 - MLT1C LTR MaLR -1 466 1 183 280 144 42 chr18 43642159 43642230 -42346704 + MIR SINE MIR 158 247 -15 283 286 13 0 chr18 43644890 43644967 -42343967 - MER63 DNA MER1_type 0 1062 985 * 418 282 48 0 chr18 43644965 43645089 -42343845 - MER63 DNA MER1_type -76 760 5 183 129 0 0 chr18 43645149 43645180 -42343754 + (T)n Simple_repeat Simple_repeat 1 31 0 1907 166 0 0 chr18 43645338 43645634 -42343300 + AluSq SINE Alu 1 296 -17 1070 270 14 31 chr18 43645634 43645815 -42343119 + L1MC4a LINE L1 5596 5770 -2038 2175 137 22 25 chr18 43645815 43646180 -42342754 - THE1B LTR MaLR 0 364 1 1070 270 14 31 chr18 43646180 43646354 -42342580 + L1MC4a LINE L1 5770 5945 -1863 191 339 18 0 chr18 43646874 43646930 -42342004 - L2 LINE L2 -30 3242 3186 1958 154 50 24 chr18 43646978 43647354 -42341580 + MLT1B LTR MaLR 3 388 -2 580 296 29 6 chr18 43647456 43647628 -42341306 - MIR SINE MIR -86 176 1 1911 235 80 2 chr18 43647875 43648390 -42340544 - L1ME3A LINE L1 -40 6130 5576 301 282 83 32 chr18 43648434 43648590 -42340344 + L1M4 LINE L1 4330 4493 -1653 12701 174 21 22 chr18 43650271 43650616 -42338318 - L1PA13 LINE L1 0 6814 6470 1959 176 0 3 chr18 43650616 43650923 -42338011 - AluSx SINE Alu -6 306 1 12701 174 21 22 chr18 43650923 43654053 -42334881 - L1PA13 LINE L1 -344 6470 3330 2039 168 39 36 chr18 43654053 43654603 -42334331 - MLT2A2 LTR ERVL -1 553 1 9950 239 30 21 chr18 43654603 43655853 -42333081 - L1PA13 LINE L1 -3462 3335 2098 2097 127 37 10 chr18 43655853 43656152 -42332782 - AluSx SINE Alu -5 307 1 9950 239 30 21 chr18 43656152 43658156 -42330778 - L1PA13 LINE L1 -4699 2098 1 211 245 0 0 chr18 43658551 43658600 -42330334 - L2 LINE L2 0 3313 3265 258 341 149 32 chr18 43658784 43659127 -42329807 - L2 LINE L2 -494 2820 2438 229 346 8 55 chr18 43659806 43659825 -42329109 + L2 LINE L2 3152 3170 -102 2216 121 134 8 chr18 43659825 43660205 -42328729 + MSTA LTR MaLR 1 428 0 229 346 8 55 chr18 43660205 43660312 -42328622 + L2 LINE L2 3170 3272 0 1523 185 39 36 chr18 43660635 43660943 -42327991 + AluJb SINE Alu 1 309 -3 356 289 71 37 chr18 43660963 43661343 -42327591 - L1ME4a LINE L1 -34 6087 5695 911 201 81 79 chr18 43661378 43661821 -42327113 - LTR37B LTR ERV1 -19 449 6 241 219 0 0 chr18 43662018 43662059 -42326875 + L2 LINE L2 3146 3186 -86 27 0 0 0 chr18 43665206 43665233 -42323701 + AT_rich Low_complexity Low_complexity 1 27 0 886 216 7 0 chr18 43665245 43665398 -42323536 - FRAM SINE Alu -12 154 1 273 305 0 0 chr18 43666195 43666254 -42322680 + L2 LINE L2 3144 3202 -70 7072 17 6 0 chr18 43666470 43667330 -42321604 - L1PA3 LINE L1 -1 6154 5290 356 93 0 0 chr18 43669326 43669380 -42319554 + Alu SINE Alu 248 301 0 523 299 189 28 chr18 43669520 43669811 -42319123 + L3 LINE CR1 1149 1486 -91 1893 100 4 12 chr18 43670446 43670705 -42318229 + AluSc SINE Alu 1 257 -52 2390 88 6 23 chr18 43670715 43671069 -42317865 + L1PB2 LINE L1 5802 6149 -2 487 222 0 0 chr18 43671387 43671477 -42317457 + 5S rRNA rRNA 1 90 -31 810 345 34 16 chr18 43673470 43673911 -42315023 + LTR16A LTR ERVL 1 449 -1 3114 98 28 0 chr18 43674418 43674807 -42314127 + MLT2A1 LTR ERVL 3 407 -37 186 43 0 0 chr18 43674807 43674830 -42314104 + (TA)n Simple_repeat Simple_repeat 2 24 0 3114 98 28 0 chr18 43674830 43674870 -42314064 + MLT2A1 LTR ERVL 407 444 0 517 260 193 0 chr18 43675679 43675829 -42313105 - MER5A DNA MER1_type 0 189 11 282 116 0 0 chr18 43676904 43676947 -42311987 + (CA)n Simple_repeat Simple_repeat 2 44 0 530 94 24 0 chr18 43677007 43677092 -42311842 + (TTCC)n Simple_repeat Simple_repeat 4 90 0 229 37 0 0 chr18 43677092 43677119 -42311815 + (TC)n Simple_repeat Simple_repeat 1 27 0 746 213 6 25 chr18 43677120 43677280 -42311654 - FRAM SINE Alu -20 156 1 22 56 0 0 chr18 43678358 43678394 -42310540 + AT_rich Low_complexity Low_complexity 1 36 0 238 274 45 76 chr18 43678568 43678725 -42310209 + MIR SINE MIR 15 166 -96 2310 77 0 10 chr18 43678827 43679125 -42309809 + AluY SINE Alu 1 295 -16 291 255 57 19 chr18 43679476 43679582 -42309352 + MIR SINE MIR 141 250 -12 250 327 20 20 chr18 43679761 43679862 -42309072 + L2 LINE L2 3160 3260 -12 21 0 0 0 chr18 43679948 43679969 -42308965 + AT_rich Low_complexity Low_complexity 1 21 0 1390 186 72 31 chr18 43679998 43680347 -42308587 + MLT1A1 LTR MaLR 1 363 -2 207 100 0 0 chr18 43680587 43680617 -42308317 + (A)n Simple_repeat Simple_repeat 1 30 0 29 28 0 0 chr18 43680725 43680761 -42308173 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr18 43681081 43681104 -42307830 + AT_rich Low_complexity Low_complexity 1 23 0 457 269 27 13 chr18 43681371 43681520 -42307414 + MLT1I LTR MaLR 102 252 -157 293 276 11 11 chr18 43682377 43682464 -42306470 - MLT1K LTR MaLR -2 586 500 499 262 0 0 chr18 43682631 43682738 -42306196 - MER81 DNA DNA -4 110 4 293 276 130 8 chr18 43683022 43683145 -42305789 - MIR SINE MIR -6 256 119 285 298 14 26 chr18 43684058 43684197 -42304737 + MIR SINE MIR 68 201 -7 796 300 42 12 chr18 43684837 43685211 -42303723 - MER115 DNA AcHobo -4 689 264 2258 102 3 0 chr18 43685696 43685991 -42302943 + AluSx SINE Alu 10 305 -7 21 0 0 0 chr18 43686085 43686106 -42302828 + AT_rich Low_complexity Low_complexity 1 21 0 221 309 64 36 chr18 43686765 43686875 -42302059 + MIR SINE MIR 34 146 -62 323 296 33 115 chr18 43686969 43687334 -42301600 - L2 LINE L2 -86 3186 2852 2078 135 3 0 chr18 43687579 43687876 -42301058 - AluSx SINE Alu -14 298 1 311 293 72 17 chr18 43687921 43688060 -42300874 - MIR SINE MIR -64 144 40 955 210 0 76 chr18 43688099 43688337 -42300597 - MER58A DNA MER1_type -4 220 1 188 363 53 39 chr18 43689064 43689345 -42299589 + L2 LINE L2 2569 2853 -461 447 68 0 0 chr18 43689581 43689640 -42299294 + (CA)n Simple_repeat Simple_repeat 1 59 0 2382 72 6 31 chr18 43689824 43690143 -42298791 + AluY SINE Alu 1 311 0 290 188 125 43 chr18 43691766 43691862 -42297072 - MIR SINE MIR -62 146 49 192 239 94 80 chr18 43691910 43692048 -42296886 + MIR3 SINE MIR 43 182 -26 272 255 92 31 chr18 43692309 43692407 -42296527 - L2 LINE L2 -1 3312 3209 351 391 22 7 chr18 43692534 43692672 -42296262 + MIR SINE MIR 28 167 -95 2411 205 79 5 chr18 43693394 43694000 -42294934 + L1MB7 LINE L1 5521 6171 -13 2109 141 0 10 chr18 43696589 43696895 -42292039 - AluSx SINE Alu -5 307 5 389 289 89 15 chr18 43696946 43697081 -42291853 - MIR3 SINE MIR -14 194 50 275 246 36 73 chr18 43697547 43697657 -42291277 - MIR SINE MIR 0 262 157 251 286 71 12 chr18 43698070 43698154 -42290780 + MIR SINE MIR 39 127 -81 498 225 33 0 chr18 43699158 43699278 -42289656 + FLAM_A SINE Alu 7 130 -12 355 272 0 29 chr18 43700635 43700738 -42288196 + MER5B DNA MER1_type 79 178 0 547 192 59 128 chr18 43700745 43700815 -42288119 + MER5A DNA MER1_type 1 74 -115 2107 112 0 0 chr18 43700815 43701102 -42287832 - AluSx SINE Alu -25 287 1 547 192 59 128 chr18 43701102 43701234 -42287700 + MER5A DNA MER1_type 74 189 0 246 277 12 0 chr18 43701489 43701572 -42287362 + MLT1I LTR MaLR 326 409 0 1201 202 12 4 chr18 43702975 43703223 -42285711 + MER88 LTR ERVL 215 464 0 785 168 39 61 chr18 43703229 43703526 -42285408 - MLT1A1 LTR MaLR -10 355 8 186 71 0 0 chr18 43704279 43704307 -42284627 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 417 330 53 27 chr18 43704498 43704686 -42284248 - MIR3 SINE MIR -8 200 8 301 304 9 54 chr18 43704684 43704796 -42284138 + MIR3 SINE MIR 55 161 -47 * 1397 112 16 0 chr18 43706173 43706361 -42282573 + AluSg/x SINE Alu 113 303 -9 2375 134 5 27 chr18 43709459 43709831 -42279103 - THE1B LTR MaLR 0 364 1 347 268 41 16 chr18 43710980 43711103 -42277831 - MLT1I LTR MaLR -199 210 85 409 206 245 16 chr18 43713416 43713600 -42275334 - MER2 DNA MER2_type -1 344 119 246 258 15 0 chr18 43713589 43713655 -42275279 - MER8 DNA MER2_type -172 67 1 * 2063 131 76 17 chr18 43713795 43714139 -42274795 - THE1B LTR MaLR 0 364 1 749 220 78 11 chr18 43714550 43714741 -42274193 - MER3 DNA MER1_type 0 209 6 200 300 77 39 chr18 43714944 43715074 -42273860 - MIR SINE MIR -15 247 113 303 28 0 0 chr18 43715139 43715175 -42273759 + (CA)n Simple_repeat Simple_repeat 1 36 0 228 143 0 0 chr18 43715434 43715476 -42273458 + (A)n Simple_repeat Simple_repeat 1 42 0 481 355 20 10 chr18 43715826 43716023 -42272911 + MIR SINE MIR 29 227 -35 382 342 174 25 chr18 43716059 43716422 -42272512 - L3 LINE CR1 -187 1390 974 892 236 43 71 chr18 43716434 43716756 -42272178 + L1MDa LINE L1 14 326 -6214 6332 221 62 20 chr18 43716758 43718760 -42270174 + L1MDa LINE L1 635 2717 -3823 2626 260 50 13 chr18 43718763 43720042 -42268892 + L1MDa LINE L1 2812 4164 -2376 4251 110 22 49 chr18 43721682 43722392 -42266542 + LTR8 LTR ERV1 1 691 0 21 0 0 0 chr18 43722401 43722422 -42266512 + AT_rich Low_complexity Low_complexity 1 21 0 1301 213 14 17 chr18 43722521 43722817 -42266117 + AluJo SINE Alu 1 295 -17 796 193 68 6 chr18 43722817 43723003 -42265931 + AluJo/FRAM SINE Alu 134 329 0 1565 191 10 13 chr18 43723741 43724044 -42264890 - AluSx SINE Alu -4 308 7 196 337 137 21 chr18 43724153 43724248 -42264686 - MIR SINE MIR -75 133 28 1733 156 73 0 chr18 43724881 43725169 -42263765 + AluJb SINE Alu 3 311 -1 414 309 112 5 chr18 43725350 43725565 -42263369 - L1MC/D LINE L1 -423 5698 5479 1583 140 54 54 chr18 43725883 43726234 -42262700 + MER4B LTR ERV1 1 351 -259 838 135 0 8 chr18 43726234 43726360 -42262574 - AluSg/x SINE Alu -12 298 174 1253 164 18 62 chr18 43726360 43726634 -42262300 + MER4B LTR ERV1 349 610 0 4022 142 10 60 chr18 43726958 43727686 -42261248 - LTR8 LTR ERV1 0 691 1 763 223 25 6 chr18 43728683 43728840 -42260094 + MER5B DNA MER1_type 19 178 0 2300 158 41 17 chr18 43729293 43729711 -42259223 + MSTA LTR MaLR 1 428 0 200 250 67 17 chr18 43729711 43729771 -42259163 + L2 LINE L2 3251 3313 0 899 241 46 9 chr18 43729949 43730165 -42258769 + MER58A DNA MER1_type 1 224 0 1708 159 61 73 chr18 43731295 43731565 -42257369 - LTR56 LTR ERV1 -1 444 179 2514 99 21 16 chr18 43731565 43731950 -42256984 + L1PB2 LINE L1 5763 6149 -2 1708 159 61 73 chr18 43731950 43732119 -42256815 - LTR56 LTR ERV1 -266 179 10 502 127 0 0 chr18 43732295 43732374 -42256560 - MADE1 DNA Mariner -1 79 1 3533 115 47 7 chr18 43732956 43733528 -42255406 + LTR49 LTR ERV1 1 595 0 40 67 0 0 chr18 43734164 43734239 -42254695 + AT_rich Low_complexity Low_complexity 1 75 0 399 21 0 0 chr18 43734946 43734994 -42253940 + (TC)n Simple_repeat Simple_repeat 1 48 0 28 0 0 0 chr18 43735117 43735145 -42253789 + AT_rich Low_complexity Low_complexity 1 28 0 1670 259 84 29 chr18 43735220 43735780 -42253154 + MLT1E LTR MaLR 3 593 0 259 246 0 0 chr18 43735914 43735983 -42252951 + T-rich Low_complexity Low_complexity 1 69 0 25 31 0 0 chr18 43736012 43736044 -42252890 + AT_rich Low_complexity Low_complexity 1 32 0 290 377 18 0 chr18 43736599 43736713 -42252221 - MIR SINE MIR -77 131 16 891 356 42 37 chr18 43738080 43738648 -42250286 - L3 LINE CR1 -156 1421 851 271 341 12 0 chr18 43739022 43739104 -42249830 - L3 LINE CR1 -1273 304 222 195 243 108 14 chr18 43739856 43739930 -42249004 - L2 LINE L2 -1 3271 3191 503 282 102 14 chr18 43739991 43740207 -42248727 + MARNA DNA Mariner 86 320 -266 1662 217 100 34 chr18 43740304 43740347 -42248587 + MLT1D LTR MaLR 1 40 -465 1856 176 0 0 chr18 43740347 43740649 -42248285 + AluSx SINE Alu 1 302 -10 1662 217 100 34 chr18 43740649 43741075 -42247859 + MLT1D LTR MaLR 40 501 -4 738 212 0 0 chr18 43741101 43741233 -42247701 + AluJo SINE Alu 1 132 -170 2220 119 3 3 chr18 43741311 43741622 -42247312 - AluSq SINE Alu -2 311 1 256 331 40 8 chr18 43741656 43741780 -42247154 + MER117 DNA MER1_type 27 154 -43 197 378 14 0 chr18 43742505 43742579 -42246355 - L2 LINE L2 -43 3229 3155 557 329 41 21 chr18 43742803 43743046 -42245888 + MIR SINE MIR 3 250 -12 360 279 158 12 chr18 43743421 43743661 -42245273 + MLT1L LTR MaLR 323 597 -18 2129 138 0 3 chr18 43744123 43744427 -42244507 + AluSx SINE Alu 3 305 -7 344 82 0 0 chr18 43745063 43745112 -42243822 + (TG)n Simple_repeat Simple_repeat 2 50 0 627 288 82 29 chr18 43746401 43747096 -42241838 + L1ME3A LINE L1 3115 3846 -2300 827 193 7 0 chr18 43747102 43747247 -42241687 + AluJo SINE Alu 142 287 -25 318 282 109 23 chr18 43747257 43747540 -42241394 + L1ME3A LINE L1 3846 4166 -1980 803 314 87 28 chr18 43747559 43748017 -42240917 + LTR16C LTR ERVL 1 485 -6 252 309 40 7 chr18 43748021 43748170 -42240764 + L1ME3A LINE L1 4179 4332 -1814 1023 267 17 8 chr18 43748331 43748691 -42240243 + L1ME3A LINE L1 4614 4976 -1170 1146 256 73 59 chr18 43748875 43748951 -42239983 + L1ME3A LINE L1 5207 5280 -890 2338 112 0 3 chr18 43748951 43749263 -42239671 + AluSq SINE Alu 1 311 -2 1146 256 73 59 chr18 43749263 43750023 -42238911 + L1ME3A LINE L1 5280 6060 -110 222 267 0 0 chr18 43750066 43750111 -42238823 + MER5C DNA MER1_type 7 51 -273 3472 134 18 62 chr18 43750126 43750380 -42238554 + MER39B LTR ERV1 3 267 -386 4109 61 6 4 chr18 43750380 43750908 -42238026 + L1PA6 LINE L1 5626 6154 0 3472 134 18 62 chr18 43750908 43751334 -42237600 + MER39B LTR ERV1 267 653 0 539 238 83 11 chr18 43751894 43752075 -42236859 + MER5C DNA MER1_type 56 249 -75 378 157 120 28 chr18 43752105 43752213 -42236721 + MER5C DNA MER1_type 206 323 -1 312 360 123 43 chr18 43752393 43752604 -42236330 + L2 LINE L2 3045 3272 0 2324 156 166 168 chr18 43753745 43754766 -42234168 - LTR28 LTR ERV1 0 1020 1 2233 111 3 0 chr18 43755075 43755372 -42233562 + AluSp SINE Alu 1 298 -15 993 46 54 0 chr18 43755723 43755853 -42233081 + L1PA5 LINE L1 6005 6141 -13 22 35 0 0 chr18 43755853 43755882 -42233052 + AT_rich Low_complexity Low_complexity 1 29 0 377 312 21 4 chr18 43756109 43756282 -42232652 + MIR SINE MIR 75 250 -12 2256 160 30 5 chr18 43756746 43757139 -42231795 + MER57A LTR ERV1 1 403 0 285 138 108 15 chr18 43757460 43757525 -42231409 + L1 LINE L1 3857 3927 -2219 4034 144 21 7 chr18 43757994 43758694 -42230240 - MER67C LTR ERV1 0 710 1 231 88 0 0 chr18 43759075 43759109 -42229825 + (T)n Simple_repeat Simple_repeat 1 34 0 2790 192 91 26 chr18 43760138 43760873 -42228061 - LTR48 LTR ERV1 -2 785 3 393 22 0 0 chr18 43761131 43761177 -42227757 + (TA)n Simple_repeat Simple_repeat 2 47 0 2073 196 93 42 chr18 43761766 43762379 -42226555 + LTR48B LTR ERV1 1 644 0 198 0 0 0 chr18 43762596 43762618 -42226316 + (A)n Simple_repeat Simple_repeat 1 22 0 1740 196 10 0 chr18 43762889 43763190 -42225744 + AluJb SINE Alu 1 304 -8 216 301 135 45 chr18 43763190 43763346 -42225588 + MIR SINE MIR 59 228 -34 1582 173 75 31 chr18 43764861 43765220 -42223714 + THE1C LTR MaLR 1 375 0 9091 138 20 42 chr18 43765223 43766835 -42222099 + THE1C-int LTR MaLR 4 1580 0 1766 160 58 22 chr18 43766835 43767197 -42221737 + THE1C LTR MaLR 1 375 0 225 94 0 0 chr18 43768060 43768092 -42220842 + (GAAAA)n Simple_repeat Simple_repeat 4 35 0 192 182 0 0 chr18 43768309 43768353 -42220581 + (CATA)n Simple_repeat Simple_repeat 4 47 0 421 280 53 13 chr18 43768691 43768841 -42220093 - MIR SINE MIR -58 204 49 208 182 109 0 chr18 43769431 43769486 -42219448 + MIR SINE MIR 84 144 -118 2131 126 13 3 chr18 43769494 43769796 -42219138 + AluSg SINE Alu 1 305 -5 2822 127 5 5 chr18 43771162 43771603 -42217331 - MER41E LTR ERV1 -18 494 54 1273 207 13 4 chr18 43771603 43771835 -42217099 - AluJb SINE Alu -78 234 1 283 350 30 10 chr18 43772142 43772242 -42216692 - MIR SINE MIR -153 109 8 470 315 27 0 chr18 43773289 43773435 -42215499 + MIR3 SINE MIR 23 172 -36 922 282 33 66 chr18 43773492 43773914 -42215020 - L2 LINE L2 -8 3305 2898 24 32 0 0 chr18 43774708 43774739 -42214195 + AT_rich Low_complexity Low_complexity 1 31 0 1658 138 10 27 chr18 43775122 43775420 -42213514 - MER4A LTR ERV1 0 664 372 543 84 53 21 chr18 43775462 43775557 -42213377 - MER4A LTR ERV1 -566 98 1 1172 126 10 34 chr18 43775683 43775889 -42213045 + THE1B LTR MaLR 164 364 0 892 275 39 42 chr18 43775889 43776070 -42212864 - L1MC/D LINE L1 -2030 5778 5597 2284 112 0 0 chr18 43776070 43776366 -42212568 - AluSq SINE Alu -17 296 1 892 275 39 42 chr18 43776366 43776519 -42212415 - L1MC/D LINE L1 -2211 5597 5445 302 253 13 40 chr18 43777053 43777128 -42211806 + MIR3 SINE MIR 99 171 -37 22 0 0 0 chr18 43777445 43777467 -42211467 + AT_rich Low_complexity Low_complexity 1 22 0 182 254 109 0 chr18 43777481 43777536 -42211398 - L2 LINE L2 -19 3294 3234 716 147 0 56 chr18 43778570 43778713 -42210221 - AluJo SINE Alu 0 312 178 528 246 0 0 chr18 43778702 43778816 -42210118 - AluJo SINE Alu -198 114 1 * 225 301 121 8 chr18 43778910 43779034 -42209900 - MIR3 SINE MIR -114 148 1 344 260 42 10 chr18 43779150 43779246 -42209688 - MIR3 SINE MIR -21 187 89 2234 130 0 6 chr18 43779437 43779752 -42209182 - AluSq SINE Alu 0 313 1 229 225 67 56 chr18 43780830 43780919 -42208015 + L2 LINE L2 2716 2805 -509 609 288 66 39 chr18 43781095 43781340 -42207594 + MIR SINE MIR 13 260 -2 2186 98 0 3 chr18 43781522 43781808 -42207126 - AluSc SINE Alu -24 285 1 233 29 0 29 chr18 43781811 43781846 -42207088 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 353 308 145 0 chr18 43781848 43781965 -42206969 + L2 LINE L2 3132 3265 -7 256 336 99 30 chr18 43781995 43782126 -42206808 + MIR3 SINE MIR 15 154 -54 2322 185 48 0 chr18 43782236 43782696 -42206238 + L1PB4 LINE L1 5669 6150 -6 211 292 0 0 chr18 43782765 43782813 -42206121 + MIR SINE MIR 212 259 -3 522 246 89 19 chr18 43783001 43783225 -42205709 - L1MC/D LINE L1 -504 5617 5398 25 31 0 0 chr18 43783225 43783257 -42205677 + AT_rich Low_complexity Low_complexity 1 32 0 185 366 0 21 chr18 43784596 43784689 -42204245 + MIR SINE MIR 46 136 -126 250 338 88 79 chr18 43785350 43785590 -42203344 + L2 LINE L2 3029 3270 -2 5024 133 24 37 chr18 43785731 43787017 -42201917 - L1PB1 LINE L1 -72 6079 4793 350 281 138 24 chr18 43787478 43787645 -42201289 - MIR SINE MIR -29 233 48 246 248 229 0 chr18 43787652 43787761 -42201173 - MER94 DNA DNA 0 134 1 523 301 88 31 chr18 43788248 43788474 -42200460 + MIR SINE MIR 23 261 -1 433 221 63 16 chr18 43788629 43788756 -42200178 - MIR3 SINE MIR -14 194 62 275 304 32 24 chr18 43788828 43788953 -42199981 + MIR SINE MIR 66 191 -71 271 256 68 38 chr18 43788970 43789103 -42199831 + L1MB4 LINE L1 5517 5653 -2155 219 289 58 58 chr18 43790366 43790470 -42198464 + MIR SINE MIR 84 187 -75 2146 129 81 42 chr18 43790975 43791385 -42197549 + MSTC LTR MaLR 1 426 -2 2302 115 0 0 chr18 43791617 43791929 -42197005 + AluSx SINE Alu 1 312 0 266 317 20 10 chr18 43792555 43792656 -42196278 + MIR3 SINE MIR 93 194 -14 256 180 33 33 chr18 43792991 43793052 -42195882 + L2 LINE L2 3189 3249 -64 360 212 0 9 chr18 43793060 43793173 -42195761 - L1MB7 LINE L1 0 6184 6073 489 163 50 35 chr18 43793184 43793325 -42195609 + L1MB4 LINE L1 6038 6180 0 21 36 0 0 chr18 43793573 43793601 -42195333 + AT_rich Low_complexity Low_complexity 1 28 0 725 276 22 22 chr18 43793870 43794193 -42194741 + L1MC5 LINE L1 7141 7463 -498 842 213 52 35 chr18 43794211 43794577 -42194357 + L1MC5 LINE L1 7555 7926 -35 300 324 146 45 chr18 43795333 43795620 -42193314 + L1MC4a LINE L1 6414 6729 -1079 240 301 9 0 chr18 43795688 43795801 -42193133 + L1M4 LINE L1 48 161 -6381 535 268 75 68 chr18 43796512 43796983 -42191951 + L1M4 LINE L1 1030 1609 -5032 1160 238 32 75 chr18 43796994 43797530 -42191404 + MER34 LTR ERV1 1 762 -25 226 203 31 16 chr18 43797574 43797638 -42191296 + L1M4 LINE L1 1512 1576 -5070 1356 287 41 24 chr18 43797641 43798229 -42190705 + L1MCc LINE L1 3 939 -5483 * 6023 205 49 56 chr18 43798225 43801699 -42187235 + L1MC3 LINE L1 4600 7993 -2 1205 269 82 19 chr18 43801703 43802286 -42186648 + L1M4 LINE L1 1717 2336 -4489 1650 179 7 0 chr18 43802442 43802759 -42186175 - AluJb SINE Alu 0 319 1 259 120 0 20 chr18 43802816 43802866 -42186068 + L1M4 LINE L1 3384 3432 -3212 264 271 112 71 chr18 43802878 43803048 -42185886 + HERV16 LTR ERVL 1386 1562 -3434 1079 340 38 18 chr18 43803133 43803686 -42185248 + HERV16 LTR ERVL 1730 2293 -2703 13961 147 88 21 chr18 43804456 43807993 -42180941 + L1PBa LINE L1 1 3775 -3087 494 321 118 21 chr18 43809257 43809494 -42179440 - MIR SINE MIR -1 261 2 249 182 0 0 chr18 43809568 43809623 -42179311 + (CA)n Simple_repeat Simple_repeat 1 55 0 330 289 82 31 chr18 43811430 43811624 -42177310 + MIR SINE MIR 58 261 -1 1667 161 121 0 chr18 43812037 43812359 -42176575 - MLT1A1 LTR MaLR 0 365 5 238 329 13 0 chr18 43812907 43812986 -42175948 + L2 LINE L2 3226 3305 -8 316 313 62 0 chr18 43813039 43813151 -42175783 + L1ME4a LINE L1 6002 6120 -1 410 214 62 17 chr18 43813221 43813451 -42175483 + L1ME3A LINE L1 5882 6166 -4 7536 33 0 1 chr18 43813701 43814625 -42174309 + L1PA4 LINE L1 5231 6152 -3 23 0 0 0 chr18 43814625 43814648 -42174286 + AT_rich Low_complexity Low_complexity 1 23 0 257 102 163 0 chr18 43814798 43814847 -42174087 - THE1B LTR MaLR 0 364 308 1691 133 41 61 chr18 43814943 43815288 -42173646 - THE1B LTR MaLR -26 338 1 10856 103 12 0 chr18 43815289 43816843 -42172091 - THE1B-int LTR MaLR -7 1573 1 2200 129 30 28 chr18 43816843 43817206 -42171728 - THE1B LTR MaLR 0 364 1 1931 141 3 17 chr18 43817614 43817904 -42171030 + AluSx SINE Alu 7 292 -20 23 0 0 0 chr18 43818305 43818328 -42170606 + AT_rich Low_complexity Low_complexity 1 23 0 23 54 0 0 chr18 43818504 43818541 -42170393 + AT_rich Low_complexity Low_complexity 1 37 0 22 80 0 0 chr18 43818563 43818613 -42170321 + AT_rich Low_complexity Low_complexity 1 50 0 375 252 16 55 chr18 43818990 43819117 -42169817 + MIR SINE MIR 92 213 -49 190 335 165 18 chr18 43819249 43819413 -42169521 - MIR SINE MIR -1 261 74 526 328 99 37 chr18 43819421 43819744 -42169190 + L3 LINE CR1 876 1218 -359 227 349 94 0 chr18 43820340 43820446 -42168488 + L3 LINE CR1 1440 1555 -22 331 261 157 46 chr18 43821263 43821416 -42167518 + MIR SINE MIR 81 250 -12 1567 215 50 13 chr18 43821552 43821928 -42167006 + MLT1B LTR MaLR 1 390 0 862 285 55 0 chr18 43822887 43823140 -42165794 - LTR16C LTR ERVL 0 491 225 1819 143 24 17 chr18 43824131 43824309 -42164625 - AluSx SINE Alu -10 302 120 198 0 0 0 chr18 43824309 43824331 -42164603 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1819 143 24 17 chr18 43824331 43824445 -42164489 - AluSx SINE Alu -192 120 8 183 265 103 29 chr18 43824774 43824842 -42164092 - L2 LINE L2 -16 3297 3225 2607 237 28 30 chr18 43825240 43826573 -42162361 - L1ME1 LINE L1 -5 6161 4830 183 114 0 0 chr18 43827217 43827252 -42161682 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 2501 179 77 0 chr18 43827488 43827985 -42160949 - MER44D DNA MER2_type 0 605 16 4188 149 19 29 chr18 43828929 43829604 -42159330 - L1PA16 LINE L1 -9 6157 5477 188 0 0 69 chr18 43829604 43829633 -42159301 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1790 163 0 17 chr18 43829633 43829921 -42159013 - AluSx SINE Alu -29 283 1 4188 149 19 29 chr18 43829921 43830042 -42158892 - L1PA16 LINE L1 -687 5479 5368 287 233 42 101 chr18 43830113 43830302 -42158632 + L1MC4 LINE L1 7712 7889 -153 296 197 115 16 chr18 43830373 43830495 -42158439 + L1MC4 LINE L1 7909 8042 0 2843 138 7 19 chr18 43830598 43831062 -42157872 - LTR22A LTR ERVK 0 458 1 944 204 18 9 chr18 43831729 43831954 -42156980 + L1ME1 LINE L1 5935 6161 -5 2294 126 21 13 chr18 43833998 43834370 -42154564 - THE1C LTR MaLR 0 375 1 3070 118 2 28 chr18 43835666 43835881 -42153053 + MLT2A2 LTR ERVL 1 220 -233 1684 104 119 15 chr18 43835881 43836150 -42152784 + AluSx SINE Alu 1 297 -15 3070 118 2 28 chr18 43836150 43836399 -42152535 + MLT2A2 LTR ERVL 220 453 0 401 283 0 10 chr18 43837518 43837617 -42151317 - MIR SINE MIR -116 146 49 2392 153 13 0 chr18 43837657 43838055 -42150879 - MER57A LTR ERV1 0 403 1 22 0 0 0 chr18 43840255 43840277 -42148657 + AT_rich Low_complexity Low_complexity 1 22 0 371 258 117 8 chr18 43842082 43842210 -42146724 + MIR3 SINE MIR 65 206 -2 336 111 0 0 chr18 43842413 43842467 -42146467 + (TC)n Simple_repeat Simple_repeat 1 54 0 863 90 15 0 chr18 43842480 43842614 -42146320 + (TTCC)n Simple_repeat Simple_repeat 2 137 0 208 294 130 40 chr18 43842615 43842792 -42146142 - L2 LINE L2 -13 3300 3108 27 49 0 0 chr18 43843840 43843881 -42145053 + AT_rich Low_complexity Low_complexity 1 41 0 545 254 16 8 chr18 43844800 43844926 -42144008 + FLAM_A SINE Alu 1 127 -15 420 322 53 26 chr18 43846561 43846788 -42142146 + L1MC4a LINE L1 4993 5225 -921 793 309 147 37 chr18 43846822 43848370 -42140564 + L1MC4a LINE L1 5267 6984 -824 255 279 67 35 chr18 43848389 43848836 -42140098 + L1MC4 LINE L1 6964 7418 -624 2136 129 0 16 chr18 43849062 43849379 -42139555 + AluSx SINE Alu 1 312 0 30391 138 20 9 chr18 43849533 43850795 -42138139 - L1PB4 LINE L1 -210 5946 4699 2252 115 50 19 chr18 43850795 43851159 -42137775 - THE1C LTR MaLR 0 375 1 30391 138 20 9 chr18 43851159 43855770 -42133164 - L1PB4 LINE L1 -1457 4699 11 232 238 16 16 chr18 43856532 43856595 -42132339 - MER94 DNA DNA -71 63 1 331 302 8 70 chr18 43857174 43857303 -42131631 + L3 LINE CR1 978 1098 -479 689 280 16 21 chr18 43857688 43857881 -42131053 - MIR SINE MIR -49 213 22 216 179 0 0 chr18 43857882 43857921 -42131013 + T-rich Low_complexity Low_complexity 2 40 0 2975 206 106 10 chr18 43857926 43858794 -42130140 - L1MC4 LINE L1 0 8042 7092 233 160 0 20 chr18 43858804 43858854 -42130080 + CT-rich Low_complexity Low_complexity 2 50 0 323 42 42 0 chr18 43858923 43858971 -42129963 + (TTCC)n Simple_repeat Simple_repeat 1 50 0 402 225 127 62 chr18 43858973 43859037 -42129897 - L1MC4a LINE L1 -781 7079 7021 2162 133 0 0 chr18 43859037 43859339 -42129595 + AluSg SINE Alu 1 302 -8 402 225 127 62 chr18 43859339 43859607 -42129327 - L1MC4a LINE L1 -839 7021 6710 345 302 83 29 chr18 43859654 43860075 -42128859 + L2 LINE L2 2596 3040 -273 2019 128 0 55 chr18 43861397 43861725 -42127209 - AluSg SINE Alu 0 310 1 1418 250 109 24 chr18 43861913 43862381 -42126553 - L1ME3 LINE L1 -25 6137 5630 2014 156 8 32 chr18 43862400 43862771 -42126163 - THE1B LTR MaLR 0 364 3 470 258 16 0 chr18 43862883 43863007 -42125927 - L1ME3 LINE L1 -593 5573 5448 549 231 64 35 chr18 43863415 43863588 -42125346 + LTR36 LTR ERV1 434 611 0 2425 104 0 0 chr18 43864700 43865009 -42123925 - AluSc SINE Alu 0 309 1 377 295 98 40 chr18 43865030 43865203 -42123731 + MIR SINE MIR 20 202 -60 268 176 29 0 chr18 43865757 43865825 -42123109 + CT-rich Low_complexity Low_complexity 2 71 0 676 216 213 86 chr18 43865840 43866108 -42122826 - AluJb SINE Alu 0 302 1 656 188 181 7 chr18 43866710 43866854 -42122080 + MER5A DNA MER1_type 15 183 -6 282 330 0 0 chr18 43867046 43867143 -42121791 - L3b LINE CR1 -385 1198 1102 198 349 30 0 chr18 43867348 43867414 -42121520 - L2 LINE L2 -8 3305 3238 244 366 0 0 chr18 43868222 43868323 -42120611 + MER94 DNA DNA 6 106 -28 240 275 153 51 chr18 43868973 43869209 -42119725 + L3 LINE CR1 970 1229 -348 279 311 96 0 chr18 43869746 43869881 -42119053 + MLT1L LTR MaLR 142 289 -326 314 287 65 9 chr18 43870047 43870155 -42118779 + MLT1K LTR MaLR 469 582 -6 1394 199 53 6 chr18 43870228 43870565 -42118369 - L1MD3 LINE L1 -14 7981 7629 252 353 60 0 chr18 43870879 43870995 -42117939 - L2 LINE L2 -7 3265 3143 181 135 39 0 chr18 43871165 43871217 -42117717 + (TA)n Simple_repeat Simple_repeat 2 55 0 21 0 0 0 chr18 43871590 43871611 -42117323 + AT_rich Low_complexity Low_complexity 1 21 0 241 229 29 29 chr18 43872136 43872206 -42116728 + GA-rich Low_complexity Low_complexity 3 72 0 200 93 70 0 chr18 43872448 43872491 -42116443 + (TA)n Simple_repeat Simple_repeat 1 46 0 542 288 12 12 chr18 43873713 43873883 -42115051 + MLT1J LTR MaLR 8 177 -334 2035 179 47 17 chr18 43873918 43874325 -42114609 + MSTB LTR MaLR 6 424 -2 526 285 92 39 chr18 43874329 43874589 -42114345 + MLT1J LTR MaLR 206 479 -32 563 220 28 0 chr18 43875601 43875742 -42113192 - L1MA10 LINE L1 -7 6327 6183 4847 152 15 16 chr18 43875770 43876724 -42112210 - L1MA5 LINE L1 0 6300 5352 22 0 0 0 chr18 43877879 43877901 -42111033 + AT_rich Low_complexity Low_complexity 1 22 0 216 405 24 0 chr18 43879071 43879155 -42109779 + L2 LINE L2 3102 3187 -85 246 242 0 16 chr18 43879762 43879824 -42109110 + LTR67 LTR ERVL 497 557 0 592 334 54 40 chr18 43881014 43881493 -42107441 + MERVL LTR ERVL 1376 1861 -3903 947 225 62 26 chr18 43881493 43881790 -42107144 - MSTD LTR MaLR 0 396 111 2277 145 106 0 chr18 43881790 43882176 -42106758 - MSTA LTR MaLR -1 427 1 8516 167 61 7 chr18 43882176 43883741 -42105193 - MSTA-int LTR MaLR 0 1651 3 2374 120 115 0 chr18 43883743 43884127 -42104807 - MSTA LTR MaLR 0 428 1 947 225 62 26 chr18 43884127 43884166 -42104768 - MSTD LTR MaLR -285 111 15 520 292 115 49 chr18 43884209 43884575 -42104359 + MERVL LTR ERVL 1890 2279 -3485 329 319 48 19 chr18 43884615 43884825 -42104109 + MERVL LTR ERVL 2352 2567 -3197 266 222 0 0 chr18 43885017 43885088 -42103846 + MERVL LTR ERVL 2715 2768 -2717 795 319 88 18 chr18 43885180 43885669 -42103265 + MERVL LTR ERVL 2941 3463 -2301 264 360 72 8 chr18 43886007 43886132 -42102802 - MIR3 SINE MIR -71 137 5 224 331 114 42 chr18 43886523 43886882 -42102052 - L3 LINE CR1 -263 1314 930 454 176 22 0 chr18 43887968 43888059 -42100875 - FRAM SINE Alu -10 166 74 641 235 0 0 chr18 43888066 43888198 -42100736 - FLAM_A SINE Alu 0 133 2 195 296 61 52 chr18 43888447 43888562 -42100372 + L2 LINE L2 2977 3092 -180 268 312 28 19 chr18 43888637 43888743 -42100191 + MIR SINE MIR 54 159 -73 296 241 170 9 chr18 43889187 43889299 -42099635 - MARNA DNA Mariner -20 566 437 274 328 83 52 chr18 43889514 43889706 -42099228 + MIR SINE MIR 57 254 -8 611 320 137 4 chr18 43890438 43890716 -42098218 + L2 LINE L2 2457 2771 -543 1981 227 243 16 chr18 43890966 43891872 -42097062 - LTR28 LTR ERV1 0 1020 1 203 289 44 56 chr18 43893396 43893486 -42095448 + MIR3 SINE MIR 91 179 -29 306 0 0 0 chr18 43893731 43893765 -42095169 + (TA)n Simple_repeat Simple_repeat 1 34 0 991 103 23 6 chr18 43893767 43893941 -42094993 - L1MA2 LINE L1 -91 6213 6037 2020 140 0 3 chr18 43893944 43894229 -42094705 - AluY SINE Alu -27 284 1 408 45 45 0 chr18 43894426 43894493 -42094441 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 11526 160 15 18 chr18 43894580 43896643 -42092291 - L1MA3 LINE L1 -1 7723 5654 1496 184 0 8 chr18 43896643 43896928 -42092006 + AluJb SINE Alu 36 318 0 2475 83 0 0 chr18 43896929 43897231 -42091703 + AluY SINE Alu 1 302 -9 11526 160 15 18 chr18 43897231 43897907 -42091027 - L1MA3 LINE L1 -2070 5654 4977 2308 120 0 0 chr18 43897907 43898216 -42090718 - AluSg SINE Alu -1 309 1 11526 160 15 18 chr18 43898216 43898981 -42089953 - L1MA3 LINE L1 -2747 4977 4227 11480 172 25 30 chr18 43898982 43901178 -42087756 - L1MA3 LINE L1 -5369 2196 12 536 343 46 0 chr18 43901397 43901613 -42087321 + MIR SINE MIR 37 262 0 220 339 0 0 chr18 43902299 43902364 -42086570 - MIR SINE MIR -35 227 163 194 328 0 0 chr18 43904093 43904160 -42084774 - MIR3 SINE MIR -19 189 123 276 216 72 31 chr18 43904708 43904805 -42084129 - MER103 DNA DNA -61 105 5 336 102 0 0 chr18 43904810 43904859 -42084075 + (TG)n Simple_repeat Simple_repeat 1 49 0 292 302 69 31 chr18 43906705 43906864 -42082070 + MIR SINE MIR 58 222 -40 1937 249 55 119 chr18 43907676 43908703 -42080231 - L2 LINE L2 -483 2831 1871 254 371 84 60 chr18 43909045 43909212 -42079722 + MIR3 SINE MIR 17 187 -21 219 270 135 0 chr18 43910991 43911065 -42077869 + MIR SINE MIR 22 105 -103 249 33 0 0 chr18 43912259 43912289 -42076645 + (CA)n Simple_repeat Simple_repeat 2 31 0 218 290 117 74 chr18 43912307 43912469 -42076465 + L2 LINE L2 2935 3103 -169 200 29 0 59 chr18 43912637 43912671 -42076263 + (TTTTTA)n Simple_repeat Simple_repeat 6 37 0 1807 119 10 17 chr18 43912675 43912968 -42075966 - L1PA10 LINE L1 0 6168 5878 18986 50 3 1 chr18 43912984 43916153 -42072781 - L1PA5 LINE L1 -6 6148 2975 334 267 82 41 chr18 43917828 43917974 -42070960 - MIR SINE MIR -17 245 94 270 0 0 0 chr18 43918128 43918158 -42070776 + (CA)n Simple_repeat Simple_repeat 1 30 0 358 192 0 158 chr18 43919415 43919561 -42069373 + MER63 DNA MER1_type 1 749 -313 213 39 0 0 chr18 43919694 43919720 -42069214 + (CCA)n Simple_repeat Simple_repeat 3 28 0 22 35 0 0 chr18 43919784 43919813 -42069121 + AT_rich Low_complexity Low_complexity 1 29 0 613 173 8 45 chr18 43919905 43920038 -42068896 + MER6 DNA MER2_type 738 865 0 1919 178 120 8 chr18 43920860 43921243 -42067691 - MSTA LTR MaLR 0 428 3 7925 195 27 11 chr18 43921262 43922870 -42066064 - MSTA-int LTR MaLR -16 1635 1 2260 126 126 5 chr18 43922870 43923252 -42065682 - MSTA LTR MaLR 0 428 1 285 109 0 0 chr18 43923412 43923458 -42065476 + (TG)n Simple_repeat Simple_repeat 2 47 0 254 268 217 22 chr18 43923489 43923627 -42065307 - L3 LINE CR1 -996 581 417 226 335 65 52 chr18 43924549 43924704 -42064230 - MIR3 SINE MIR -35 173 17 580 349 151 33 chr18 43926062 43926762 -42062172 - L2 LINE L2 -505 2809 2027 340 319 49 7 chr18 43927315 43927459 -42061475 - L1MC4a LINE L1 -1925 5883 5734 197 381 50 52 chr18 43927506 43928124 -42060810 - L2 LINE L2 -2493 821 203 2066 108 3 62 chr18 43928124 43928448 -42060486 + AluSx SINE Alu 1 305 -7 197 381 50 52 chr18 43928448 43928487 -42060447 - L2 LINE L2 -3111 203 165 194 253 53 13 chr18 43928793 43928868 -42060066 + MIR3 SINE MIR 96 173 -35 227 363 88 26 chr18 43929410 43929523 -42059411 - L2 LINE L2 -13 3259 3140 426 304 148 51 chr18 43930198 43930550 -42058384 + L2 LINE L2 2928 3313 0 2227 121 0 0 chr18 43931546 43931843 -42057091 - AluSx SINE Alu -10 302 6 200 143 24 0 chr18 43932911 43932953 -42055981 + (ATG)n Simple_repeat Simple_repeat 2 44 0 222 174 0 0 chr18 43932984 43933030 -42055904 + (TA)n Simple_repeat Simple_repeat 2 47 0 438 349 66 63 chr18 43933805 43934298 -42054636 - L2 LINE L2 0 3272 2771 228 310 38 111 chr18 43934460 43934828 -42054106 - L2 LINE L2 -15 3257 2917 279 262 67 67 chr18 43935260 43935409 -42053525 - MIR SINE MIR -17 245 97 677 124 78 16 chr18 43935871 43936000 -42052934 + LTR7 LTR ERV1 1 137 -313 705 176 0 33 chr18 43936106 43936259 -42052675 + LTR7 LTR ERV1 303 450 0 14813 127 6 32 chr18 43936259 43939318 -42049616 + HERVH LTR ERV1 1 3297 -4416 14458 99 8 18 chr18 43939314 43943351 -42045583 + HERVH LTR ERV1 3624 7713 0 * 1160 159 140 89 chr18 43943351 43943779 -42045155 + LTR7 LTR ERV1 1 450 0 771 256 34 0 chr18 43944673 43944849 -42044085 - MER63A DNA MER1_type -2 208 27 199 356 134 41 chr18 43945278 43945472 -42043462 + MIR SINE MIR 16 227 -35 377 323 60 7 chr18 43946315 43946483 -42042451 + MIR SINE MIR 58 230 -32 189 0 0 0 chr18 43947313 43947334 -42041600 + (T)n Simple_repeat Simple_repeat 1 21 0 2319 160 19 12 chr18 43947859 43948285 -42040649 - MER57B LTR ERV1 -5 429 1 845 244 25 90 chr18 43948306 43948707 -42040227 - MLT1C LTR MaLR -92 375 1 24 0 0 0 chr18 43949043 43949067 -42039867 + AT_rich Low_complexity Low_complexity 1 24 0 1284 171 0 5 chr18 43950142 43950353 -42038581 + AluSc SINE Alu 98 307 -2 419 0 20 0 chr18 43950398 43950449 -42038485 + (TG)n Simple_repeat Simple_repeat 2 53 0 282 56 0 0 chr18 43951388 43951424 -42037510 + (TG)n Simple_repeat Simple_repeat 2 37 0 2000 130 3 7 chr18 43952506 43952799 -42036135 + AluSc SINE Alu 1 292 -17 225 303 67 34 chr18 43953284 43953373 -42035561 - MIR SINE MIR -97 111 20 781 188 0 0 chr18 43953784 43953917 -42035017 - FLAM_C SINE Alu 0 133 1 181 186 86 86 chr18 43953920 43953990 -42034944 - MIR SINE MIR -114 148 79 1071 199 33 0 chr18 43955009 43955220 -42033714 - MER20 DNA MER1_type 0 219 2 279 0 0 0 chr18 43955684 43955715 -42033219 + (TG)n Simple_repeat Simple_repeat 2 32 0 260 279 0 0 chr18 43956521 43956582 -42032352 - MIR3 SINE MIR -23 185 125 371 315 94 0 chr18 43957671 43957820 -42031114 + MIR SINE MIR 30 192 -70 436 279 147 37 chr18 43957866 43958138 -42030796 - L2 LINE L2 -1 3312 3011 2205 123 26 3 chr18 43958138 43958488 -42030446 - THE1B LTR MaLR 0 364 7 353 304 123 23 chr18 43958493 43958664 -42030270 - L2 LINE L2 -297 3016 2829 210 258 0 0 chr18 43959340 43959402 -42029532 + (TG)n Simple_repeat Simple_repeat 2 63 0 412 229 0 22 chr18 43959984 43960163 -42028771 + CT-rich Low_complexity Low_complexity 6 180 0 333 0 0 0 chr18 43960767 43960804 -42028130 + (TG)n Simple_repeat Simple_repeat 2 38 0 232 340 73 33 chr18 43961605 43961755 -42027179 - MIR SINE MIR -56 206 51 216 352 0 23 chr18 43962006 43962094 -42026840 + L2 LINE L2 3187 3272 0 1190 119 0 62 chr18 43962344 43962538 -42026396 - AluSp SINE Alu 0 313 132 1869 74 9 0 chr18 43962556 43962787 -42026147 - AluSx SINE Alu -17 295 63 461 132 0 0 chr18 43962897 43962965 -42025969 - AluSx SINE Alu -245 68 1 383 307 48 8 chr18 43964440 43964583 -42024351 - MIR3 SINE MIR -47 161 34 237 178 0 0 chr18 43965327 43965372 -42023562 + (TG)n Simple_repeat Simple_repeat 2 46 0 986 186 93 0 chr18 43965581 43965818 -42023116 - MER33 DNA MER1_type -8 316 58 280 297 77 25 chr18 43965821 43966019 -42022915 - MER63 DNA MER1_type 0 1060 3 290 114 23 0 chr18 43966021 43966065 -42022869 - MER33 DNA MER1_type -278 46 2 22 0 0 0 chr18 43966484 43966506 -42022428 + AT_rich Low_complexity Low_complexity 1 22 0 29 28 0 0 chr18 43966549 43966585 -42022349 + AT_rich Low_complexity Low_complexity 1 36 0 270 354 131 0 chr18 43966702 43966908 -42022026 - MIR SINE MIR -28 234 2 250 353 12 0 chr18 43967091 43967176 -42021758 + L2 LINE L2 3184 3269 -3 698 293 37 9 chr18 43967261 43967476 -42021458 - MIR SINE MIR -12 250 30 1782 184 7 7 chr18 43967497 43967806 -42021128 - AluJb SINE Alu -3 309 1 430 208 117 101 chr18 43969312 43969610 -42019324 - MER5C DNA MER1_type -5 319 17 342 272 0 9 chr18 43970491 43970605 -42018329 + (TA)n Simple_repeat Simple_repeat 2 114 0 669 288 50 24 chr18 43970662 43971045 -42017889 - L1ME3A LINE L1 -286 6695 6303 299 250 161 89 chr18 43971045 43971269 -42017665 + MLT1I LTR MaLR 1 240 -169 638 300 59 67 chr18 43971298 43972439 -42016495 - L1ME3A LINE L1 -1382 5575 4455 970 240 5 5 chr18 43972441 43972641 -42016293 + MER20 DNA MER1_type 1 200 -19 269 0 0 0 chr18 43972741 43972771 -42016163 + L1P1 LINE L1 5440 5469 -686 420 282 84 41 chr18 43972811 43973300 -42015634 - L1ME3A LINE L1 -2666 4291 3782 7286 86 7 0 chr18 43973565 43974603 -42014331 + L1P LINE L1 4259 5303 -843 306 373 43 0 chr18 43974642 43974827 -42014107 + L1 LINE L1 3644 3836 -2310 267 100 0 0 chr18 43974830 43974870 -42014064 + L1P LINE L1 5314 5353 -819 6298 65 18 1 chr18 43974870 43975704 -42013230 + L1PA7 LINE L1 5304 6151 -3 2076 130 0 0 chr18 43976260 43976544 -42012390 - AluSx SINE Alu -13 299 16 295 267 103 40 chr18 43976729 43977053 -42011881 - L1MDa LINE L1 -4632 2325 2032 198 171 0 0 chr18 43977053 43977094 -42011840 + (CA)n Simple_repeat Simple_repeat 2 42 0 387 262 70 14 chr18 43977099 43977313 -42011621 - L1MDa LINE L1 -4905 2042 1817 306 51 0 0 chr18 43977394 43977433 -42011501 - L1PA2 LINE L1 -64 6091 6053 614 44 77 11 chr18 43977433 43977506 -42011428 + L1PA2 LINE L1 6058 6154 -1 528 277 39 25 chr18 43977623 43977908 -42011026 - L1MDa LINE L1 -5180 1679 1391 329 344 53 49 chr18 43978165 43978450 -42010484 - L1MDa LINE L1 -6554 305 20 397 329 63 54 chr18 43978492 43978614 -42010320 - L1MEd LINE L1 -5303 816 697 2375 59 0 33 chr18 43978614 43978920 -42010014 + AluY SINE Alu 1 296 -15 397 329 63 54 chr18 43978920 43979131 -42009803 - L1MEd LINE L1 -5422 697 480 289 306 21 69 chr18 43979808 43979952 -42008982 - L3 LINE CR1 -85 1492 1356 203 307 117 60 chr18 43980556 43980839 -42008095 - L2 LINE L2 -815 2499 2201 196 360 20 20 chr18 43981670 43981770 -42007164 - MER5B DNA MER1_type -1 177 78 430 244 12 0 chr18 43981796 43981882 -42007052 - Tigger7 DNA MER2_type -5 2486 2400 * 2981 164 11 32 chr18 43981876 43982413 -42006521 - Tigger7 DNA MER2_type -1961 526 1 577 338 9 76 chr18 43982484 43982694 -42006240 - MER91A DNA MER1_type 0 196 1 305 294 128 0 chr18 43983504 43983606 -42005328 - MIR SINE MIR -64 144 30 276 286 105 9 chr18 43984561 43984666 -42004268 - MIR3 SINE MIR -30 178 64 277 275 14 0 chr18 43984671 43984740 -42004194 + CT-rich Low_complexity Low_complexity 3 72 0 251 157 20 0 chr18 43984763 43984814 -42004120 + CT-rich Low_complexity Low_complexity 3 54 0 218 326 43 71 chr18 43985420 43985561 -42003373 + L2 LINE L2 3159 3295 -18 319 353 8 8 chr18 43985808 43985927 -42003007 + MIR3 SINE MIR 81 199 -9 216 316 25 38 chr18 43987151 43987230 -42001704 + MIR3 SINE MIR 117 194 -14 192 163 0 0 chr18 43987642 43987685 -42001249 + C-rich Low_complexity Low_complexity 5 47 0 360 0 0 0 chr18 43988472 43988512 -42000422 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 36 0 0 chr18 43988892 43988920 -42000014 + AT_rich Low_complexity Low_complexity 1 28 0 397 325 136 0 chr18 43989187 43989341 -41999593 + MIR3 SINE MIR 34 208 0 2056 93 0 45 chr18 43991668 43991958 -41996976 + AluSc SINE Alu 21 297 -12 1444 169 19 136 chr18 43992598 43992856 -41996078 - MLT1A1 LTR MaLR 0 365 171 2291 84 3 10 chr18 43992856 43993166 -41995768 - AluSc SINE Alu -1 308 1 1444 169 19 136 chr18 43993166 43993320 -41995614 - MLT1A1 LTR MaLR -194 171 1 6041 135 66 18 chr18 43993830 43994905 -41994029 + Tigger3b DNA MER2_type 16 1142 -89 246 67 0 0 chr18 43994905 43994935 -41993999 + Tigger3b DNA MER2_type 1084 1113 -119 963 156 34 34 chr18 43994935 43995114 -41993820 + Tigger3b DNA MER2_type 1062 1240 -1 197 299 52 0 chr18 43995137 43995214 -41993720 + L2 LINE L2 2920 3000 -313 2096 115 3 0 chr18 43995799 43996087 -41992847 + AluSx SINE Alu 1 289 -23 180 0 0 0 chr18 43996100 43996120 -41992814 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 458 327 97 42 chr18 43996121 43996451 -41992483 + L2 LINE L2 2450 2797 -517 1127 251 64 36 chr18 43996500 43996938 -41991996 + MLT1D LTR MaLR 1 465 -2 247 355 86 11 chr18 43997299 43997392 -41991542 + L2 LINE L2 3158 3257 -15 205 412 0 0 chr18 43997799 43997884 -41991050 + L2 LINE L2 3168 3252 -20 1455 223 69 27 chr18 43998456 43998904 -41990030 - MLT1C LTR MaLR 0 467 1 205 315 62 39 chr18 43999601 43999731 -41989203 - MIR SINE MIR -65 197 65 234 0 0 0 chr18 44000386 44000412 -41988522 + (CA)n Simple_repeat Simple_repeat 2 27 0 569 238 93 21 chr18 44000940 44001133 -41987801 + MER74A LTR ERVL 358 622 0 210 233 0 0 chr18 44001189 44001232 -41987702 + (CATA)n Simple_repeat Simple_repeat 4 46 0 1410 188 49 31 chr18 44002389 44002677 -41986257 + AluJo SINE Alu 7 299 -13 26 50 0 0 chr18 44002737 44002777 -41986157 + AT_rich Low_complexity Low_complexity 1 40 0 301 235 39 20 chr18 44003500 44003602 -41985332 - Charlie8 DNA MER1_type -2231 186 83 664 285 72 0 chr18 44005372 44005579 -41983355 - MIR SINE MIR -27 235 14 511 193 0 0 chr18 44005911 44006123 -41982811 + FLAM_C SINE Alu 31 242 0 275 291 140 64 chr18 44006456 44006721 -41982213 + L2 LINE L2 3028 3312 -1 31 0 0 0 chr18 44008811 44008842 -41980092 + AT_rich Low_complexity Low_complexity 1 31 0 238 203 51 0 chr18 44010746 44010805 -41978129 + L1MB1 LINE L1 6074 6135 -33 1791 131 7 3 chr18 44010805 44011088 -41977846 + L1PB4 LINE L1 5873 6156 0 260 174 43 43 chr18 44011111 44011180 -41977754 + L1MB1 LINE L1 6113 6181 -8 1789 91 22 0 chr18 44012949 44013210 -41975724 - AluSp SINE Alu 0 311 46 26 0 0 0 chr18 44013548 44013574 -41975360 + AT_rich Low_complexity Low_complexity 1 26 0 2849 10 0 0 chr18 44063649 44063962 -41924972 - AluYb8 SINE Alu -5 313 1 3050 204 25 0 chr18 44063962 44064510 -41924424 - Tigger7 DNA MER2_type -1922 565 4 230 253 0 95 chr18 44065369 44065464 -41923470 + MIR SINE MIR 118 203 -59 328 350 73 64 chr18 44065960 44066372 -41922562 - L2 LINE L2 -481 2833 2411 3237 121 80 0 chr18 44066372 44066885 -41922049 - MER41C LTR ERV1 0 554 1 328 350 73 64 chr18 44066885 44067098 -41921836 - L2 LINE L2 -903 2411 2202 406 235 18 14 chr18 44067194 44067340 -41921594 + L1MC4 LINE L1 7907 7995 0 39 38 0 0 chr18 44068191 44068244 -41920690 + AT_rich Low_complexity Low_complexity 1 53 0 515 326 45 11 chr18 44068349 44068527 -41920407 + MIR SINE MIR 79 262 0 204 297 23 62 chr18 44070053 44070181 -41918753 + MER5A DNA MER1_type 67 189 0 267 271 135 0 chr18 44070881 44070977 -41917957 - MIR3 SINE MIR -5 203 95 284 289 54 27 chr18 44071108 44071257 -41917677 - L1ME3A LINE L1 -21 6149 5997 260 259 35 12 chr18 44071280 44071365 -41917569 - L1ME3A LINE L1 -429 5741 5655 332 282 152 19 chr18 44071481 44071515 -41917419 + L1ME3A LINE L1 4886 4914 -1232 3053 28 0 0 chr18 44071515 44071875 -41917059 + L1PA5 LINE L1 5795 6154 0 332 282 152 19 chr18 44071875 44072273 -41916661 + L1ME3A LINE L1 4914 5376 -770 336 292 187 5 chr18 44072342 44072551 -41916383 + L1ME3A LINE L1 5498 5744 -426 256 286 99 31 chr18 44072653 44072814 -41916120 + L1ME3A LINE L1 5991 6162 -8 2015 151 0 7 chr18 44074653 44074968 -41913966 + AluSx SINE Alu 4 312 0 759 312 124 30 chr18 44076434 44076870 -41912064 - MLT1L LTR MaLR -2 613 137 206 121 0 0 chr18 44077189 44077222 -41911712 + (T)n Simple_repeat Simple_repeat 1 33 0 11132 99 4 3 chr18 44077266 44079656 -41909278 - L1PA8 LINE L1 0 6172 3773 4134 99 30 2 chr18 44079903 44080531 -41908403 - L1MA1 LINE L1 0 6302 5657 1102 81 19 0 chr18 44080531 44080692 -41908242 + L1M1 LINE L1 5329 5492 -810 516 257 16 39 chr18 44080949 44081200 -41907734 - L1ME4a LINE L1 -285 5836 5540 207 0 0 0 chr18 44081995 44082018 -41906916 + (A)n Simple_repeat Simple_repeat 1 23 0 38 22 0 0 chr18 44082037 44082082 -41906852 + AT_rich Low_complexity Low_complexity 1 45 0 12282 195 40 43 chr18 44082557 44084240 -41904694 - L1P4 LINE L1 -729 6140 4452 228 35 0 0 chr18 44084240 44084269 -41904665 + (TG)n Simple_repeat Simple_repeat 2 30 0 12282 195 40 43 chr18 44084269 44087423 -41901511 - L1P4 LINE L1 -2417 4452 1154 2192 68 0 7 chr18 44087423 44087701 -41901233 - AluSg SINE Alu -34 276 1 12282 195 40 43 chr18 44087701 44088850 -41900084 - L1P4 LINE L1 -5715 1154 2 4692 232 49 28 chr18 44088939 44089373 -41899561 - L1MCa LINE L1 -2332 4094 3670 1423 231 83 6 chr18 44089373 44089711 -41899223 + MLT1A1 LTR MaLR 1 364 -1 4692 232 49 28 chr18 44089711 44091196 -41897738 - L1MCa LINE L1 -2756 3670 2135 487 167 42 33 chr18 44091201 44091321 -41897613 + Charlie5 DNA MER1_type 2498 2618 0 315 71 0 0 chr18 44091360 44091402 -41897532 + (TA)n Simple_repeat Simple_repeat 2 43 0 3945 161 18 5 chr18 44091434 44092173 -41896761 - L1PA16 LINE L1 -6 6160 5413 401 122 14 0 chr18 44093320 44093394 -41895540 + (TG)n Simple_repeat Simple_repeat 2 76 0 345 301 31 71 chr18 44093925 44094151 -41894783 - L3 LINE CR1 -145 1432 1216 254 270 0 50 chr18 44094216 44094316 -41894618 + MIR SINE MIR 168 262 0 291 314 165 88 chr18 44094321 44094764 -41894170 - L3 LINE CR1 -319 1258 782 1863 122 36 26 chr18 44096897 44097200 -41891734 + AluJo SINE Alu 1 306 -6 1922 148 0 0 chr18 44098179 44098450 -41890484 - AluSc SINE Alu -38 271 1 873 60 45 0 chr18 44099269 44099403 -41889531 + (TTTC)n Simple_repeat Simple_repeat 4 143 0 244 257 59 50 chr18 44099556 44099657 -41889277 - L2 LINE L2 -8 3264 3163 231 234 31 0 chr18 44099881 44099945 -41888989 + L1MC4 LINE L1 6638 6703 -1339 230 146 0 42 chr18 44099913 44099961 -41888973 - L1MC4 LINE L1 -1339 6703 6658 * 302 299 23 0 chr18 44099963 44100050 -41888884 + L1MC4 LINE L1 6614 6702 -1340 287 194 28 0 chr18 44100050 44100122 -41888812 + (CATA)n Simple_repeat Simple_repeat 1 74 0 1746 202 67 41 chr18 44100166 44100656 -41888278 - MLT1D LTR MaLR -2 503 1 297 0 0 0 chr18 44101140 44101173 -41887761 + (T)n Simple_repeat Simple_repeat 1 33 0 2014 136 0 3 chr18 44101257 44101543 -41887391 - AluSc SINE Alu -16 293 9 244 286 24 79 chr18 44101808 44101934 -41887000 + MIR SINE MIR 24 142 -66 2202 140 24 14 chr18 44102084 44102455 -41886479 - THE1C LTR MaLR 0 375 1 199 320 20 0 chr18 44102583 44102633 -41886301 - MIR SINE MIR -116 92 42 5523 149 16 3 chr18 44103003 44103938 -41884996 - L1PA15 LINE L1 0 6165 5221 3511 204 4 1 chr18 44103935 44104650 -41884284 + L1PA15 LINE L1 4514 5230 -916 * 265 192 0 0 chr18 44105015 44105067 -41883867 - L1ME LINE L1 -332 5832 5781 226 285 49 90 chr18 44108450 44108594 -41880340 + MIR SINE MIR 21 158 -104 222 37 0 0 chr18 44110470 44110497 -41878437 + (A)n Simple_repeat Simple_repeat 1 27 0 206 121 0 0 chr18 44111082 44111115 -41877819 + (A)n Simple_repeat Simple_repeat 1 33 0 412 355 39 0 chr18 44113118 44113273 -41875661 - MIR3 SINE MIR -27 181 21 459 48 0 0 chr18 44114556 44114618 -41874316 + (TA)n Simple_repeat Simple_repeat 2 63 0 262 335 74 48 chr18 44115582 44115892 -41873042 + L2 LINE L2 2991 3308 -5 2019 167 69 84 chr18 44116100 44116296 -41872638 + MLT1D LTR MaLR 1 199 -306 2226 96 13 0 chr18 44116296 44116597 -41872337 + AluSx SINE Alu 1 305 -7 2019 167 69 84 chr18 44116597 44116909 -41872025 + MLT1D LTR MaLR 199 501 -4 359 250 117 0 chr18 44117329 44117449 -41871485 + MIR3 SINE MIR 61 194 -14 1952 143 20 26 chr18 44117863 44118212 -41870722 - Tigger7 DNA MER2_type -12 2575 2229 1160 230 100 10 chr18 44118212 44118556 -41870378 + MER47B DNA MER2_type 1 417 -1 11492 174 16 32 chr18 44118557 44119036 -41869898 - Tigger7 DNA MER2_type -357 2130 1645 2610 30 0 3 chr18 44119036 44119336 -41869598 - AluY SINE Alu -12 299 1 11492 174 16 32 chr18 44119336 44120470 -41868464 - Tigger7 DNA MER2_type -842 1645 560 2910 9 0 0 chr18 44120470 44120785 -41868149 - AluYb8 SINE Alu -3 315 1 11492 174 16 32 chr18 44120785 44121333 -41867601 - Tigger7 DNA MER2_type -1927 560 4 230 253 0 95 chr18 44122192 44122287 -41866647 + MIR SINE MIR 118 203 -59 311 344 77 69 chr18 44122794 44123191 -41865743 - L2 LINE L2 -497 2817 2412 3251 121 80 0 chr18 44123191 44123704 -41865230 - MER41C LTR ERV1 0 554 1 311 344 77 69 chr18 44123704 44123917 -41865017 - L2 LINE L2 -902 2412 2202 388 235 18 14 chr18 44124013 44124159 -41864775 + L1MC4 LINE L1 7907 7995 0 39 38 0 0 chr18 44125010 44125063 -41863871 + AT_rich Low_complexity Low_complexity 1 53 0 506 326 45 11 chr18 44125168 44125346 -41863588 + MIR SINE MIR 79 262 0 207 297 23 62 chr18 44126872 44127000 -41861934 + MER5A DNA MER1_type 67 189 0 268 271 135 0 chr18 44127700 44127796 -41861138 - MIR3 SINE MIR -5 203 95 269 289 54 27 chr18 44127927 44128076 -41860858 - L1ME3A LINE L1 -21 6149 5997 252 259 35 12 chr18 44128099 44128184 -41860750 - L1ME3A LINE L1 -429 5741 5655 287 282 152 19 chr18 44128300 44128334 -41860600 + L1ME3A LINE L1 4886 4914 -1232 3069 28 0 0 chr18 44128334 44128694 -41860240 + L1PA5 LINE L1 5795 6154 0 287 282 152 19 chr18 44128694 44129092 -41859842 + L1ME3A LINE L1 4914 5376 -770 330 292 187 5 chr18 44129161 44129370 -41859564 + L1ME3A LINE L1 5498 5744 -426 247 286 99 31 chr18 44129472 44129633 -41859301 + L1ME3A LINE L1 5991 6162 -8 2388 87 3 0 chr18 44131472 44131772 -41857162 + AluSx SINE Alu 4 304 -8 514 311 47 19 chr18 44132476 44132688 -41856246 + MIR SINE MIR 2 219 -43 339 181 0 95 chr18 44133056 44133094 -41855840 - MER53 DNA DNA -21 168 128 1769 167 7 7 chr18 44133094 44133387 -41855547 - AluJb SINE Alu -19 293 1 339 181 0 95 chr18 44133387 44133453 -41855481 - MER53 DNA DNA -61 128 74 319 318 68 15 chr18 44134893 44135025 -41853909 + L2 LINE L2 3134 3272 0 305 248 86 26 chr18 44135043 44135160 -41853774 + MARNA DNA Mariner 89 212 -374 25 31 0 0 chr18 44135198 44135230 -41853704 + AT_rich Low_complexity Low_complexity 1 32 0 25 65 0 0 chr18 44135553 44135599 -41853335 + AT_rich Low_complexity Low_complexity 1 46 0 2636 204 12 12 chr18 44135629 44136187 -41852747 + MER89 LTR ERV1 2 559 0 339 169 0 34 chr18 44137083 44137172 -41851762 + GA-rich Low_complexity Low_complexity 2 87 0 253 244 113 75 chr18 44138343 44138503 -41850431 + MIR SINE MIR 83 248 -14 21 0 0 0 chr18 44139427 44139448 -41849486 + AT_rich Low_complexity Low_complexity 1 21 0 1714 197 11 22 chr18 44140379 44140744 -41848190 - MLT1A1 LTR MaLR -2 363 3 242 358 25 0 chr18 44140755 44140836 -41848098 - L2 LINE L2 -2 3311 3229 2385 66 0 13 chr18 44141442 44141746 -41847188 + AluY SINE Alu 1 300 -11 225 331 96 32 chr18 44141844 44142001 -41846933 - MLT1J2 LTR MaLR -2 448 282 26 0 0 0 chr18 44142158 44142184 -41846750 + AT_rich Low_complexity Low_complexity 1 26 0 7568 188 22 11 chr18 44142763 44144785 -41844149 + L1PA15 LINE L1 3737 5776 -389 262 200 0 21 chr18 44144844 44144939 -41843995 + (TA)n Simple_repeat Simple_repeat 2 94 0 2164 154 10 13 chr18 44144940 44145324 -41843610 + L1PA15 LINE L1 5783 6165 0 394 245 38 9 chr18 44145549 44145655 -41843279 + MLT1J2 LTR MaLR 46 154 -296 566 374 76 16 chr18 44145939 44146437 -41842497 - L2 LINE L2 -1081 2233 1706 22 56 0 0 chr18 44146970 44147006 -41841928 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr18 44148025 44148053 -41840881 + AT_rich Low_complexity Low_complexity 1 28 0 247 288 61 15 chr18 44148325 44148391 -41840543 + MIR SINE MIR 92 160 -102 195 129 0 0 chr18 44148769 44148800 -41840134 + (A)n Simple_repeat Simple_repeat 1 31 0 214 302 138 60 chr18 44149525 44149641 -41839293 - L2 LINE L2 -6 3266 3142 192 40 0 0 chr18 44150387 44150412 -41838522 + (TC)n Simple_repeat Simple_repeat 2 26 0 486 315 86 43 chr18 44150434 44150663 -41838271 - L1ME4a LINE L1 -58 6063 5845 1195 150 3 184 chr18 44150663 44151016 -41837918 - AluJo SINE Alu -13 289 1 486 315 86 43 chr18 44151016 44151227 -41837707 - L1ME4a LINE L1 -276 5845 5604 43994 37 1 14 chr18 44151227 44157464 -41831470 + L1PA4 LINE L1 2 6152 -3 228 245 86 58 chr18 44157490 44157629 -41831305 - L1ME4a LINE L1 -501 5620 5478 31 92 0 0 chr18 44157792 44157879 -41831055 + AT_rich Low_complexity Low_complexity 1 87 0 24 32 0 0 chr18 44159293 44159324 -41829610 + AT_rich Low_complexity Low_complexity 1 31 0 239 349 92 0 chr18 44159754 44159863 -41829071 - L2 LINE L2 -20 3252 3134 340 254 127 0 chr18 44160213 44160331 -41828603 + MIR SINE MIR 56 188 -74 417 39 0 0 chr18 44160864 44160915 -41828019 + (TG)n Simple_repeat Simple_repeat 2 52 0 264 335 161 26 chr18 44162487 44162642 -41826292 + MIR3 SINE MIR 23 198 -10 1629 171 24 7 chr18 44163804 44164102 -41824832 + L1MCa LINE L1 3 305 -6121 207 162 0 0 chr18 44164278 44164315 -41824619 + (TG)n Simple_repeat Simple_repeat 2 38 0 226 259 0 0 chr18 44164427 44164481 -41824453 + (TA)n Simple_repeat Simple_repeat 2 55 0 1443 186 55 13 chr18 44165953 44166313 -41822621 + MLT2C2 LTR ERVL 1 414 0 189 247 39 52 chr18 44166803 44166880 -41822054 - MIR SINE MIR -38 224 149 320 276 65 62 chr18 44167262 44167487 -41821447 + MLT1J2 LTR MaLR 198 427 -23 22 0 0 0 chr18 44167594 44167616 -41821318 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr18 44168067 44168090 -41820844 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr18 44168456 44168477 -41820457 + AT_rich Low_complexity Low_complexity 1 21 0 298 373 104 29 chr18 44168477 44168756 -41820178 + L2 LINE L2 2754 3057 -256 2144 112 7 3 chr18 44169739 44170033 -41818901 - AluSp SINE Alu -18 295 1 32 26 0 0 chr18 44170469 44170508 -41818426 + AT_rich Low_complexity Low_complexity 1 39 0 310 155 183 14 chr18 44170722 44170793 -41818141 - MER53 DNA DNA -2 187 105 274 147 191 15 chr18 44170733 44170801 -41818133 + MER53 DNA DNA 24 103 -86 * 319 167 17 0 chr18 44170805 44170865 -41818069 - MER53 DNA DNA -128 61 1 185 212 0 0 chr18 44170879 44170912 -41818022 - MIR SINE MIR -169 93 61 2844 10 0 0 chr18 44172293 44172601 -41816333 + AluY SINE Alu 1 308 -3 2339 221 15 16 chr18 44173731 44174337 -41814597 - L1M2 LINE L1 -4411 2438 1834 8025 197 60 11 chr18 44174439 44175539 -41813395 + L1PB4 LINE L1 3257 4301 -1855 221 73 0 24 chr18 44175539 44175580 -41813354 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 8025 197 60 11 chr18 44175580 44176917 -41812017 + L1PB4 LINE L1 4301 5813 -343 3353 112 30 2 chr18 44176925 44177451 -41811483 - L1MC4a LINE L1 -373 5795 5255 2443 96 8 27 chr18 44177451 44177806 -41811128 + L1PA13 LINE L1 5794 6152 -11 541 257 36 36 chr18 44177806 44178016 -41810918 + L1MC4a LINE L1 5801 6013 -1795 21 0 0 0 chr18 44178413 44178434 -41810500 + AT_rich Low_complexity Low_complexity 1 21 0 1784 172 3 18 chr18 44178782 44179120 -41809814 + L1PB4 LINE L1 5814 6146 -10 23 0 0 0 chr18 44182361 44182384 -41806550 + AT_rich Low_complexity Low_complexity 1 23 0 202 200 0 25 chr18 44182510 44182550 -41806384 + CT-rich Low_complexity Low_complexity 4 42 0 1779 258 71 44 chr18 44183053 44183802 -41805132 - L1ME1 LINE L1 -8 6158 5390 1224 102 0 18 chr18 44183803 44183969 -41804965 - AluSq SINE Alu -18 295 133 4287 249 59 43 chr18 44183969 44185686 -41803248 - L1ME1 LINE L1 -750 5396 3652 353 286 29 100 chr18 44185689 44186000 -41802934 + MLT1D LTR MaLR 5 293 -212 203 0 37 0 chr18 44186921 44186948 -41801986 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 287 333 56 16 chr18 44187375 44187501 -41801433 - L2 LINE L2 -3 3310 3180 2470 248 185 36 chr18 44188511 44189827 -41799107 - L1MC4 LINE L1 -2 8040 6528 210 264 0 38 chr18 44189983 44190036 -41798898 + polypurine Low_complexity Low_complexity 3 53 0 234 0 0 0 chr18 44190112 44190138 -41798796 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 360 0 0 0 chr18 44190137 44190177 -41798757 + (GA)n Simple_repeat Simple_repeat 2 41 0 876 157 0 92 chr18 44190178 44190363 -41798571 - AluJo SINE Alu -38 274 107 252 0 0 0 chr18 44190619 44190647 -41798287 + (TG)n Simple_repeat Simple_repeat 1 28 0 1878 146 7 0 chr18 44190696 44190976 -41797958 - AluSx SINE Alu -29 283 2 318 248 69 21 chr18 44191750 44191895 -41797039 - L1MC5 LINE L1 -185 7776 7625 360 252 49 8 chr18 44192041 44192164 -41796770 - L1MC5 LINE L1 -519 7442 7315 612 278 24 17 chr18 44192252 44192602 -41796332 - L1MC4 LINE L1 -790 7009 6613 393 331 44 71 chr18 44192685 44193001 -41795933 - L2 LINE L2 -248 3065 2755 21 71 0 0 chr18 44193499 44193541 -41795393 + AT_rich Low_complexity Low_complexity 1 42 0 25 31 0 0 chr18 44193550 44193582 -41795352 + AT_rich Low_complexity Low_complexity 1 32 0 205 245 64 43 chr18 44193973 44194067 -41794867 - MER5C DNA MER1_type -219 105 10 * 235 365 131 22 chr18 44194009 44194410 -41794524 + L2 LINE L2 2784 3228 -85 254 264 85 57 chr18 44194475 44194581 -41794353 + MIR SINE MIR 87 195 -67 288 360 11 1 chr18 44195472 44195575 -41793359 - MIR SINE MIR -97 111 9 21 0 0 0 chr18 44196362 44196383 -41792551 + AT_rich Low_complexity Low_complexity 1 21 0 225 97 28 56 chr18 44196565 44196637 -41792297 + (TA)n Simple_repeat Simple_repeat 1 70 0 216 275 33 0 chr18 44196694 44196785 -41792149 + (TATATG)n Simple_repeat Simple_repeat 3 96 0 3719 123 30 15 chr18 44197434 44198037 -41790897 - LTR9 LTR ERV1 0 612 1 225 397 34 14 chr18 44198798 44198944 -41789990 + MIR3 SINE MIR 48 196 -12 313 263 26 0 chr18 44199223 44199299 -41789635 - L2 LINE L2 -21 3292 3215 21 36 0 0 chr18 44199922 44199950 -41788984 + AT_rich Low_complexity Low_complexity 1 28 0 260 346 51 0 chr18 44200072 44200150 -41788784 + MIR3 SINE MIR 92 173 -35 264 120 0 0 chr18 44200604 44200654 -41788280 + (TC)n Simple_repeat Simple_repeat 1 50 0 988 252 65 26 chr18 44200709 44201019 -41787915 + MLT1F1 LTR MaLR 228 549 -18 216 0 0 0 chr18 44201149 44201173 -41787761 + (CACAA)n Simple_repeat Simple_repeat 4 27 0 338 309 150 34 chr18 44201397 44201604 -41787330 + MIR SINE MIR 32 262 0 231 152 0 61 chr18 44202550 44202569 -41786365 + (TA)n Simple_repeat Simple_repeat 1 20 -42 216 0 0 0 chr18 44202569 44202593 -41786341 + (CA)n Simple_repeat Simple_repeat 2 25 0 231 152 0 61 chr18 44202593 44202639 -41786295 + (TA)n Simple_repeat Simple_repeat 20 62 0 21 0 0 0 chr18 44202947 44202968 -41785966 + AT_rich Low_complexity Low_complexity 1 21 0 303 313 30 0 chr18 44203383 44203482 -41785452 - MIR SINE MIR 0 262 161 325 89 0 0 chr18 44203641 44203686 -41785248 - L1PBa LINE L1 -6816 47 3 22 35 0 0 chr18 44203730 44203759 -41785175 + AT_rich Low_complexity Low_complexity 1 29 0 187 195 24 0 chr18 44204536 44204577 -41784357 - L2 LINE L2 -556 2758 2717 1724 43 8 8 chr18 44204651 44204886 -41784048 - L1PA3 LINE L1 -3001 3145 2911 18502 32 0 0 chr18 44204886 44207899 -41781035 + L1PA3 LINE L1 3140 6150 -5 1771 172 0 24 chr18 44209254 44209551 -41779383 - AluJo SINE Alu -21 291 2 189 311 66 57 chr18 44209566 44209672 -41779262 - MIR SINE MIR -55 207 101 244 361 39 0 chr18 44209801 44209936 -41778998 + MIR SINE MIR 16 155 -67 233 314 43 0 chr18 44210652 44210722 -41778212 + L2 LINE L2 2612 2684 -630 935 224 4 46 chr18 44211175 44211412 -41777522 - MLT1A2 LTR MaLR -7 367 141 1282 190 40 28 chr18 44211424 44211677 -41777257 + MLT1A1 LTR MaLR 110 365 0 627 214 0 48 chr18 44211677 44211822 -41777112 - MLT1A2 LTR MaLR -227 138 1 808 261 167 31 chr18 44211838 44212198 -41776736 + MLT1D LTR MaLR 97 505 0 285 257 28 28 chr18 44212515 44212624 -41776310 + L1MC/D LINE L1 5693 5801 -2007 26 82 0 0 chr18 44212862 44212923 -41776011 + AT_rich Low_complexity Low_complexity 1 61 0 207 0 0 0 chr18 44212926 44212949 -41775985 + (T)n Simple_repeat Simple_repeat 1 23 0 537 257 16 39 chr18 44213744 44213995 -41774939 + L1ME4a LINE L1 5540 5836 -285 1110 81 19 0 chr18 44214252 44214413 -41774521 - L1M1 LINE L1 -810 5492 5329 4133 99 30 2 chr18 44214413 44215041 -41773893 + L1MA1 LINE L1 5657 6302 0 11120 99 19 10 chr18 44215288 44217678 -41771256 + L1PA8 LINE L1 3773 6172 0 206 121 0 0 chr18 44217722 44217755 -41771179 + (A)n Simple_repeat Simple_repeat 1 33 0 785 304 129 30 chr18 44218074 44218508 -41770426 + MLT1L LTR MaLR 137 613 -2 1978 156 0 7 chr18 44219974 44220292 -41768642 - AluSx SINE Alu 0 312 1 362 324 40 52 chr18 44220399 44220572 -41768362 - MIR SINE MIR -13 249 79 395 345 61 83 chr18 44221231 44221861 -41767073 + L2 LINE L2 2649 3272 0 243 205 51 64 chr18 44222229 44222307 -41766627 - MIR3 SINE MIR -50 158 82 313 22 43 0 chr18 44224046 44224092 -41764842 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 2222 107 0 3 chr18 44224092 44224391 -41764543 - AluSq SINE Alu -14 299 2 387 89 0 0 chr18 44224391 44224447 -41764487 + (TCTA)n Simple_repeat Simple_repeat 4 59 0 2039 127 0 0 chr18 44224447 44224731 -41764203 - AluSx SINE Alu -28 284 1 30 0 0 0 chr18 44224736 44224766 -41764168 + AT_rich Low_complexity Low_complexity 1 30 0 429 245 0 0 chr18 44224813 44224952 -41763982 + (TA)n Simple_repeat Simple_repeat 2 140 0 509 171 0 0 chr18 44225076 44225164 -41763770 + FRAM SINE Alu 75 162 -14 195 42 0 0 chr18 44226322 44226346 -41762588 + (CA)n Simple_repeat Simple_repeat 2 25 0 193 339 0 0 chr18 44226349 44226405 -41762529 + L2 LINE L2 3250 3305 -8 189 294 153 0 chr18 44227819 44227904 -41761030 + L2 LINE L2 3214 3311 -2 2555 81 145 5 chr18 44227926 44228319 -41760615 + LTR7 LTR ERV1 1 448 -2 3014 101 2 0 chr18 44228321 44228735 -41760199 + HERVH LTR ERV1 1 415 -7298 * 14531 97 7 24 chr18 44228733 44230933 -41758001 + HERVH LTR ERV1 825 2987 -4726 872 149 20 0 chr18 44230927 44231075 -41757859 + HERVH LTR ERV1 3140 3290 -4423 * 3302 115 4 4 chr18 44231074 44231568 -41757366 + HERVH LTR ERV1 3500 3993 -3720 4326 139 0 3 chr18 44231570 44232234 -41756700 + HERVH LTR ERV1 4488 5149 -2564 1317 148 19 0 chr18 44232235 44232451 -41756483 + HERVH LTR ERV1 5600 5819 -1894 2274 102 56 13 chr18 44232451 44232825 -41756109 + HERVH LTR ERV1 7324 7713 0 2687 67 122 5 chr18 44232825 44233226 -41755708 + LTR7 LTR ERV1 1 448 -2 3279 46 2 104 chr18 44234682 44235181 -41753753 + LTR7 LTR ERV1 1 448 -2 354 293 87 8 chr18 44235349 44235591 -41753343 + MIR SINE MIR 2 262 0 21 0 0 0 chr18 44235639 44235660 -41753274 + AT_rich Low_complexity Low_complexity 1 21 0 207 333 45 0 chr18 44235824 44235890 -41753044 + L2 LINE L2 3168 3236 -36 316 295 25 33 chr18 44236092 44236214 -41752720 + MLT1I LTR MaLR 253 373 -36 222 37 0 0 chr18 44236847 44236874 -41752060 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 288 239 229 38 chr18 44237174 44237546 -41751388 + L1ME3A LINE L1 2134 2576 -3570 * 6148 184 9 25 chr18 44237540 44239571 -41749363 + L1PB1 LINE L1 3566 5743 -408 1405 110 32 0 chr18 44239577 44239795 -41749139 + L1PB1 LINE L1 5925 6149 -2 1022 297 64 18 chr18 44239822 44240748 -41748186 + L1ME3A LINE L1 2580 3547 -2599 503 246 46 75 chr18 44240748 44240988 -41747946 + L1ME3A LINE L1 5659 5891 -279 331 178 84 47 chr18 44241003 44241110 -41747824 - L1MC3 LINE L1 -8 7777 7667 352 305 7 21 chr18 44241374 44241515 -41747419 - MER46C DNA MER2_type -120 218 80 246 274 19 28 chr18 44241869 44241975 -41746959 + L1M4 LINE L1 4743 4847 -1299 270 221 13 13 chr18 44242203 44242280 -41746654 + (TA)n Simple_repeat Simple_repeat 2 78 0 26 50 0 0 chr18 44243192 44243232 -41745702 + AT_rich Low_complexity Low_complexity 1 40 0 273 198 0 128 chr18 44243308 44243394 -41745540 - MIR SINE MIR -116 146 72 198 0 0 0 chr18 44244164 44244186 -41744748 + (TTAAA)n Simple_repeat Simple_repeat 2 23 0 22 0 0 0 chr18 44244421 44244443 -41744491 + AT_rich Low_complexity Low_complexity 1 22 0 498 330 132 0 chr18 44245813 44246010 -41742924 + MIR SINE MIR 29 251 -11 754 285 109 44 chr18 44246105 44246601 -41742333 + L2 LINE L2 2782 3307 -6 28 0 0 0 chr18 44247813 44247841 -41741093 + AT_rich Low_complexity Low_complexity 1 28 0 338 377 60 33 chr18 44248453 44248787 -41740147 + L2 LINE L2 1131 1473 -1841 1821 141 30 36 chr18 44249389 44249694 -41739240 - AluSx SINE Alu -9 303 1 1255 200 20 4 chr18 44249766 44250011 -41738923 + MLT2B1 LTR ERVL 272 520 0 220 333 86 52 chr18 44250193 44250367 -41738567 - MIR3 SINE MIR -16 192 13 393 22 0 0 chr18 44250592 44250638 -41738296 + (CA)n Simple_repeat Simple_repeat 2 47 0 189 0 0 0 chr18 44250640 44250661 -41738273 + (TA)n Simple_repeat Simple_repeat 2 22 0 2126 116 3 3 chr18 44250663 44250956 -41737978 - AluSp SINE Alu -20 293 1 570 272 7 0 chr18 44251456 44251592 -41737342 + MIR SINE MIR 8 144 -118 23 0 0 0 chr18 44252547 44252570 -41736364 + AT_rich Low_complexity Low_complexity 1 23 0 1006 163 0 0 chr18 44252570 44252723 -41736211 - AluSg/x SINE Alu -25 285 133 234 348 54 54 chr18 44252909 44253133 -41735801 - L3 LINE CR1 -122 1455 1232 22 0 0 0 chr18 44253515 44253537 -41735397 + AT_rich Low_complexity Low_complexity 1 22 0 3810 143 56 18 chr18 44253784 44254060 -41734874 - Tigger3(Golem) DNA MER2_type 0 3029 2765 2390 81 0 0 chr18 44254060 44254355 -41734579 + AluY SINE Alu 1 295 -16 3810 143 56 18 chr18 44254355 44254796 -41734138 - Tigger3(Golem) DNA MER2_type -264 2765 2285 729 176 0 0 chr18 44254796 44254904 -41734030 - Tigger3(Golem) DNA MER2_type -2921 108 1 208 337 11 11 chr18 44255092 44255184 -41733750 + MIR3 SINE MIR 107 198 -10 2396 113 8 3 chr18 44256624 44256977 -41731957 + THE1A LTR MaLR 1 355 0 11290 103 4 1 chr18 44256977 44258552 -41730382 + THE1A-int LTR MaLR 1 1580 0 2601 110 3 0 chr18 44258552 44258906 -41730028 + THE1A LTR MaLR 1 355 0 235 114 29 43 chr18 44258906 44258976 -41729958 + (TA)n Simple_repeat Simple_repeat 2 70 0 646 328 31 12 chr18 44259708 44259967 -41728967 + MLT1K LTR MaLR 19 282 -306 369 285 97 7 chr18 44260011 44260155 -41728779 + MLT1K LTR MaLR 372 528 -60 406 57 0 0 chr18 44260669 44260759 -41728175 + L1PA3 LINE L1 6085 6174 0 278 288 14 0 chr18 44261665 44261738 -41727196 + A-rich Low_complexity Low_complexity 4 77 0 23 0 0 0 chr18 44261998 44262021 -41726913 + AT_rich Low_complexity Low_complexity 1 23 0 226 347 5 10 chr18 44262276 44262401 -41726533 + MIR SINE MIR 3 127 -81 374 327 0 9 chr18 44262967 44263077 -41725857 - MIR SINE MIR -75 133 25 338 264 0 33 chr18 44263397 44263488 -41725446 + MER21B LTR ERV1 1 88 -775 734 276 83 0 chr18 44263514 44263706 -41725228 + MER21B LTR ERV1 22 229 -634 22 56 0 0 chr18 44264751 44264787 -41724147 + AT_rich Low_complexity Low_complexity 1 36 0 186 103 0 0 chr18 44265129 44265158 -41723776 + (CTTTG)n Simple_repeat Simple_repeat 2 30 0 21 36 0 0 chr18 44265568 44265596 -41723338 + AT_rich Low_complexity Low_complexity 1 28 0 338 341 23 14 chr18 44266002 44266290 -41722644 - MLT1I LTR MaLR -77 332 1 2377 49 0 3 chr18 44266293 44266609 -41722325 + AluY SINE Alu 1 315 0 315 150 0 0 chr18 44266727 44266787 -41722147 + (CA)n Simple_repeat Simple_repeat 2 61 0 268 345 44 0 chr18 44267157 44267270 -41721664 - L2 LINE L2 0 3272 3155 380 259 19 19 chr18 44267471 44267579 -41721355 - MIR SINE MIR -67 195 88 26 0 0 0 chr18 44267649 44267675 -41721259 + AT_rich Low_complexity Low_complexity 1 26 0 1734 263 108 57 chr18 44267691 44268479 -41720455 - L2 LINE L2 -550 2764 1937 2152 216 34 6 chr18 44269980 44270476 -41718458 + MER67D LTR ERV1 1 510 -4 363 313 10 0 chr18 44270707 44270803 -41718131 + MIR SINE MIR 57 153 -109 261 0 0 0 chr18 44270926 44270955 -41717979 + (T)n Simple_repeat Simple_repeat 1 29 0 808 201 95 109 chr18 44271101 44271148 -41717786 - Charlie1a DNA MER1_type -2474 287 241 2102 143 0 0 chr18 44271148 44271455 -41717479 + AluSq SINE Alu 1 307 -6 808 201 95 109 chr18 44271455 44271690 -41717244 - Charlie1a DNA MER1_type -2520 241 9 2163 119 0 0 chr18 44272296 44272608 -41716326 + AluSq SINE Alu 1 312 0 315 0 0 0 chr18 44272753 44272788 -41716146 + (TG)n Simple_repeat Simple_repeat 2 36 0 4996 129 12 25 chr18 44273180 44274018 -41714916 - MER4D LTR ERV1 -45 827 1 403 204 80 0 chr18 44274018 44274106 -41714828 - MIR SINE MIR -72 190 96 306 183 0 0 chr18 44275595 44275666 -41713268 + (TAGA)n Simple_repeat Simple_repeat 3 73 0 24 85 0 0 chr18 44276622 44276681 -41712253 + AT_rich Low_complexity Low_complexity 1 59 0 23 33 0 0 chr18 44277383 44277413 -41711521 + AT_rich Low_complexity Low_complexity 1 30 0 379 344 97 15 chr18 44277471 44277666 -41711268 + MIR SINE MIR 41 251 -11 210 363 0 12 chr18 44277941 44278021 -41710913 + MIR SINE MIR 26 104 -158 24 96 0 0 chr18 44278104 44278177 -41710757 + AT_rich Low_complexity Low_complexity 1 73 0 22 0 0 0 chr18 44278195 44278217 -41710717 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr18 44278562 44278590 -41710344 + AT_rich Low_complexity Low_complexity 1 28 0 1858 52 0 0 chr18 44280206 44280437 -41708497 - L1PA5 LINE L1 -113 6041 5811 945 33 0 17 chr18 44280437 44280554 -41708380 + L1PA5 LINE L1 6037 6154 0 493 204 72 13 chr18 44280895 44281047 -41707887 - Charlie1a DNA MER1_type 0 1455 1295 46 68 0 0 chr18 44281047 44281135 -41707799 + AT_rich Low_complexity Low_complexity 1 88 0 4623 217 55 39 chr18 44281150 44282443 -41706491 - Charlie1a DNA MER1_type -141 1314 1 3679 194 16 4 chr18 44282506 44283243 -41705691 - L1 LINE L1 -1555 4591 3846 2000 100 48 0 chr18 44283552 44283842 -41705092 - AluSx SINE Alu -8 304 1 218 323 0 42 chr18 44283876 44283972 -41704962 - MIR SINE MIR -68 194 103 600 371 39 45 chr18 44284847 44285384 -41703550 + MLT1K LTR MaLR 33 566 -22 240 411 13 7 chr18 44285665 44285816 -41703118 - MIR SINE MIR -51 211 60 818 266 108 21 chr18 44286609 44286721 -41702213 - L2 LINE L2 -1043 2271 2170 207 0 0 0 chr18 44286721 44286744 -41702190 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 818 266 108 21 chr18 44286744 44286917 -41702017 - L2 LINE L2 -1144 2170 1961 4115 115 123 129 chr18 44288177 44289587 -41699347 + pTR5 LTR ERV1 741 2438 0 599 201 30 4 chr18 44289698 44289869 -41699065 + MER31A LTR ERV1 256 435 -31 24 67 0 0 chr18 44290602 44290647 -41698287 + AT_rich Low_complexity Low_complexity 1 45 0 316 355 40 24 chr18 44292388 44292512 -41696422 - L3 LINE CR1 -1 1576 1451 382 343 144 26 chr18 44292545 44293219 -41695715 + L2 LINE L2 2556 3313 0 23 54 0 0 chr18 44293234 44293271 -41695663 + AT_rich Low_complexity Low_complexity 1 37 0 2410 41 3 32 chr18 44293630 44293945 -41694989 - AluY SINE Alu -5 306 1 718 314 79 83 chr18 44294899 44295594 -41693340 + L3 LINE CR1 421 1112 -465 265 342 42 17 chr18 44296050 44296170 -41692764 + MIR SINE MIR 31 153 -109 21 0 0 0 chr18 44296191 44296212 -41692722 + AT_rich Low_complexity Low_complexity 1 21 0 2296 112 0 3 chr18 44297386 44297700 -41691234 + AluSq SINE Alu 1 313 0 3528 220 75 9 chr18 44298201 44299181 -41689753 - Charlie1 DNA MER1_type -75 2686 1642 355 344 111 11 chr18 44300528 44300708 -41688226 - MIR3 SINE MIR -8 200 3 245 271 51 0 chr18 44302110 44302169 -41686765 + L3 LINE CR1 1511 1572 -5 38 39 0 0 chr18 44302629 44302681 -41686253 + AT_rich Low_complexity Low_complexity 1 52 0 516 281 33 17 chr18 44303144 44303456 -41685478 + MLT1I LTR MaLR 7 350 -59 23 54 0 0 chr18 44304498 44304535 -41684399 + AT_rich Low_complexity Low_complexity 1 37 0 4008 206 159 9 chr18 44304766 44306124 -41682810 + L1PBa LINE L1 24 1672 -5191 1675 108 8 4 chr18 44306228 44306496 -41682438 + L1PBa LINE L1 1953 2221 -4642 893 197 14 85 chr18 44307029 44307252 -41681682 + MER63A DNA MER1_type 1 207 -3 388 329 21 0 chr18 44307410 44307550 -41681384 + MIR3 SINE MIR 37 179 -29 469 273 155 6 chr18 44307823 44307984 -41680950 - MER5A DNA MER1_type -1 188 4 552 363 40 9 chr18 44308594 44308817 -41680117 + MIR SINE MIR 20 249 -13 180 0 0 0 chr18 44310381 44310401 -41678533 + (TTG)n Simple_repeat Simple_repeat 2 21 0 900 243 56 26 chr18 44310786 44311108 -41677826 + MER2 DNA MER2_type 5 336 -9 635 363 80 6 chr18 44311317 44311656 -41677278 + LTR33 LTR ERVL 5 368 -153 1639 194 126 11 chr18 44311749 44312131 -41676803 + MSTB LTR MaLR 1 426 0 906 155 19 84 chr18 44312386 44312599 -41676335 + MER20 DNA MER1_type 1 199 -20 326 339 9 9 chr18 44312672 44312784 -41676150 - L2 LINE L2 0 3272 3161 226 325 77 8 chr18 44314470 44314587 -41674347 + MIR3 SINE MIR 35 159 -49 279 54 0 0 chr18 44315681 44315718 -41673216 + (TG)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr18 44316557 44316578 -41672356 + AT_rich Low_complexity Low_complexity 1 21 0 1176 213 50 26 chr18 44316717 44317097 -41671837 + LTR37A LTR ERV1 19 407 -19 471 263 9 0 chr18 44317148 44317262 -41671672 - MIR SINE MIR -96 166 52 245 227 13 0 chr18 44317320 44317395 -41671539 + L1ME LINE L1 3868 3943 -2203 314 326 108 48 chr18 44317448 44317782 -41671152 + L1ME LINE L1 4012 4365 -1781 573 290 29 51 chr18 44318534 44318682 -41670252 + L1ME LINE L1 5272 5422 -744 2535 55 3 0 chr18 44318682 44318992 -41669942 + AluY SINE Alu 1 311 0 573 290 29 51 chr18 44318992 44319196 -41669738 + L1ME LINE L1 5422 5613 -553 24 32 0 0 chr18 44320713 44320744 -41668190 + AT_rich Low_complexity Low_complexity 1 31 0 3227 158 27 31 chr18 44323492 44323729 -41665205 - L1MA4A LINE L1 -2 6301 6064 2143 122 0 3 chr18 44323729 44324032 -41664902 + AluSx SINE Alu 1 302 -10 3227 158 27 31 chr18 44324032 44324434 -41664500 - L1MA4A LINE L1 -239 6064 5665 198 194 0 0 chr18 44324719 44324755 -41664179 - L2 LINE L2 -12 3301 3266 276 77 0 0 chr18 44324779 44324818 -41664116 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 202 281 35 0 chr18 44324969 44325026 -41663908 - MIR SINE MIR -111 151 93 180 461 0 0 chr18 44325227 44325355 -41663579 + MIR3 SINE MIR 31 158 -50 225 94 0 0 chr18 44325506 44325538 -41663396 + (CA)n Simple_repeat Simple_repeat 2 33 0 24 32 0 0 chr18 44325581 44325612 -41663322 + AT_rich Low_complexity Low_complexity 1 31 0 529 271 70 10 chr18 44326108 44326267 -41662667 + L1MA9 LINE L1 6064 6239 -73 210 37 0 0 chr18 44326267 44326294 -41662640 + (CA)n Simple_repeat Simple_repeat 2 28 0 529 271 70 10 chr18 44326294 44326333 -41662601 + L1MA9 LINE L1 6239 6274 -38 27 29 0 0 chr18 44326744 44326778 -41662156 + AT_rich Low_complexity Low_complexity 1 34 0 310 247 93 10 chr18 44326899 44326996 -41661938 + MIR3 SINE MIR 97 201 -7 290 202 62 147 chr18 44328072 44328098 -41660836 - MER5C DNA MER1_type -200 124 97 2329 103 0 0 chr18 44328098 44328409 -41660525 - AluY SINE Alu 0 311 1 290 202 62 147 chr18 44328409 44328511 -41660423 - MER5C DNA MER1_type -227 97 7 195 215 51 89 chr18 44328607 44328686 -41660248 + MIR3 SINE MIR 2 77 -131 25 51 0 0 chr18 44329362 44329401 -41659533 + AT_rich Low_complexity Low_complexity 1 39 0 328 255 14 0 chr18 44329488 44329569 -41659365 - MIR SINE MIR -68 140 59 465 193 9 46 chr18 44330666 44330684 -41658250 - MER53 DNA DNA -82 107 90 2445 207 44 11 chr18 44330684 44331225 -41657709 + MER89 LTR ERV1 1 559 0 465 193 9 46 chr18 44331225 44331315 -41657619 - MER53 DNA DNA -99 90 3 2116 115 7 0 chr18 44331447 44331743 -41657191 - AluSp SINE Alu -15 298 1 262 357 33 37 chr18 44332736 44332977 -41655957 - L3 LINE CR1 -567 1010 771 845 162 0 7 chr18 44333580 44333716 -41655218 + Tigger4(Zombi) DNA MER2_type 1 135 -2596 212 371 29 0 chr18 44333790 44333895 -41655039 - MIR3 SINE MIR -3 205 98 219 343 71 0 chr18 44333966 44334036 -41654898 - L2 LINE L2 -10 3262 3188 2106 192 189 74 chr18 44334949 44335819 -41653115 - LTR28 LTR ERV1 0 1020 1 192 371 13 38 chr18 44336022 44336181 -41652753 - L2 LINE L2 -1017 2297 2143 206 197 16 16 chr18 44336315 44336376 -41652558 + (TA)n Simple_repeat Simple_repeat 1 61 0 581 260 103 86 chr18 44336421 44337310 -41651624 + L1M4 LINE L1 2600 3504 -2642 873 297 58 2 chr18 44337440 44337854 -41651080 + L1M4 LINE L1 3691 4127 -2019 247 289 53 9 chr18 44337852 44337966 -41650968 + L1ME3A LINE L1 6032 6150 -20 * 26 0 0 0 chr18 44338389 44338415 -41650519 + AT_rich Low_complexity Low_complexity 1 26 0 204 337 56 0 chr18 44338476 44338565 -41650369 - L3b LINE CR1 -307 1276 1183 361 315 67 13 chr18 44338906 44339055 -41649879 + LTR16A LTR ERVL 1 157 -293 356 320 90 31 chr18 44339418 44339640 -41649294 - MIR SINE MIR 0 262 28 553 256 101 40 chr18 44339945 44340144 -41648790 - MIR SINE MIR -50 212 2 518 310 93 14 chr18 44340314 44340530 -41648404 + MIR SINE MIR 30 262 0 473 314 18 30 chr18 44340753 44340922 -41648012 + MIR3 SINE MIR 35 201 -7 387 0 0 0 chr18 44341020 44341063 -41647871 + (TG)n Simple_repeat Simple_repeat 1 43 0 1878 121 40 3 chr18 44342520 44342817 -41646117 + AluSc SINE Alu 1 308 -1 1251 156 10 0 chr18 44343765 44343957 -41644977 - AluSq SINE Alu -119 194 1 190 317 73 24 chr18 44344936 44345018 -41643916 + L2 LINE L2 3196 3281 -32 1350 259 61 32 chr18 44345406 44345880 -41643054 + MER110 LTR ERV1 4 491 0 3537 154 38 14 chr18 44346775 44347413 -41641521 + MER39B LTR ERV1 1 653 0 2208 68 31 0 chr18 44347650 44347942 -41640992 - AluY SINE Alu -10 301 1 577 311 6 0 chr18 44347943 44348104 -41640830 + MER20 DNA MER1_type 58 219 0 2232 101 0 0 chr18 44348722 44349018 -41639916 + AluSx SINE Alu 1 296 -16 4153 220 14 20 chr18 44349354 44350578 -41638356 - L1MB7 LINE L1 -8 6674 5461 924 142 0 0 chr18 44350599 44350740 -41638194 - AluSg/x SINE Alu -18 292 152 1831 259 36 43 chr18 44350747 44351350 -41637584 - L1MB7 LINE L1 -5930 612 14 1812 159 59 25 chr18 44352904 44353262 -41635672 + THE1C LTR MaLR 1 370 -5 556 271 112 0 chr18 44358063 44358233 -41630701 - MER5A DNA MER1_type 0 189 1 1491 186 24 27 chr18 44358338 44358634 -41630300 + AluJo SINE Alu 5 299 -13 508 276 74 6 chr18 44358653 44358816 -41630118 + MER5B DNA MER1_type 5 178 0 21 0 0 0 chr18 44359152 44359173 -41629761 + AT_rich Low_complexity Low_complexity 1 21 0 204 299 0 81 chr18 44359231 44359318 -41629616 - MIR SINE MIR -117 145 66 217 215 46 31 chr18 44359352 44359417 -41629517 - L2 LINE L2 -5 3267 3202 318 345 76 15 chr18 44359648 44359845 -41629089 - L3 LINE CR1 -6 1571 1363 1854 162 44 0 chr18 44359932 44360253 -41628681 - MER1B DNA MER1_type 0 337 3 3001 207 33 10 chr18 44360381 44360995 -41627939 - MER73 LTR ERVL -1 643 16 1639 97 182 0 chr18 44361090 44361337 -41627597 - AluSc SINE Alu -17 292 1 239 240 0 0 chr18 44362190 44362240 -41626694 + L1MC4 LINE L1 6663 6712 -1330 392 288 33 39 chr18 44362992 44363145 -41625789 - MLT1K LTR MaLR -17 571 420 1753 229 76 25 chr18 44363341 44363830 -41625104 - MER119 DNA MER1_type -7 576 63 291 244 70 134 chr18 44366098 44366270 -41622664 + MIR SINE MIR 89 249 -13 283 300 27 45 chr18 44366926 44367036 -41621898 - MIR3 SINE MIR 0 208 101 24 32 0 0 chr18 44368147 44368178 -41620756 + AT_rich Low_complexity Low_complexity 1 31 0 245 300 0 0 chr18 44368349 44368439 -41620495 - L1MC4 LINE L1 -1339 6703 6614 231 287 23 0 chr18 44368363 44368450 -41620484 + L1MC4 LINE L1 6614 6702 -1340 * 1190 222 0 0 chr18 44368468 44368702 -41620232 + MER46B DNA MER2_type 1 109 -127 311 100 0 40 chr18 44368699 44368749 -41620185 + LTR56 LTR ERV1 347 394 -51 * 829 148 26 13 chr18 44368747 44368902 -41620032 + MER46B DNA MER2_type 80 236 0 236 170 19 0 chr18 44368908 44368961 -41619973 + (CATATA)n Simple_repeat Simple_repeat 1 54 0 2335 160 28 28 chr18 44368962 44369394 -41619540 - Tigger2a DNA MER2_type -1 433 2 330 26 0 0 chr18 44369395 44369434 -41619500 + (TG)n Simple_repeat Simple_repeat 2 40 0 1688 289 108 21 chr18 44369456 44370358 -41618576 - HAL1 LINE L1 -73 2434 1455 843 318 108 46 chr18 44370440 44371155 -41617779 - HAL1 LINE L1 -1537 970 212 389 294 59 0 chr18 44371166 44371285 -41617649 - HAL1 LINE L1 -2378 129 4 2265 94 7 0 chr18 44371632 44371929 -41617005 - AluSp SINE Alu -10 303 5 205 363 100 26 chr18 44372193 44372383 -41616551 + L2 LINE L2 2658 2861 -453 226 363 187 21 chr18 44372429 44372718 -41616216 + L2 LINE L2 2936 3272 0 264 130 0 0 chr18 44373943 44373989 -41614945 + (TG)n Simple_repeat Simple_repeat 2 47 0 230 311 29 78 chr18 44375688 44375894 -41613040 + L2 LINE L2 1754 1949 -1365 2293 79 0 3 chr18 44376131 44376422 -41612512 + AluY SINE Alu 1 290 -21 23 0 0 0 chr18 44377527 44377550 -41611384 + AT_rich Low_complexity Low_complexity 1 23 0 4371 187 29 14 chr18 44378277 44379138 -41609796 + L1MC1 LINE L1 5443 6316 -17 206 95 24 0 chr18 44379148 44379190 -41609744 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1064 114 11 49 chr18 44379199 44379383 -41609551 - L1PA16 LINE L1 -524 5642 5466 2923 158 20 2 chr18 44379383 44379893 -41609041 + L1PA16 LINE L1 5638 6157 -9 21 0 0 0 chr18 44380221 44380242 -41608692 + AT_rich Low_complexity Low_complexity 1 21 0 215 359 145 0 chr18 44380896 44381041 -41607893 + MIR3 SINE MIR 36 201 -7 357 281 0 0 chr18 44381292 44381438 -41607496 + GA-rich Low_complexity Low_complexity 4 149 0 3197 176 37 14 chr18 44382263 44382907 -41606027 + L1MC1 LINE L1 5669 6327 -6 1206 94 12 0 chr18 44383909 44384069 -41604865 + AluSg/x SINE Alu 138 299 -13 1534 218 28 14 chr18 44384077 44384435 -41604499 - MLT1A1 LTR MaLR -2 363 1 24 0 0 0 chr18 44385532 44385556 -41603378 + AT_rich Low_complexity Low_complexity 1 24 0 268 180 0 0 chr18 44386685 44386735 -41602199 + L1ME4a LINE L1 5968 6017 -104 2118 99 3 0 chr18 44386823 44387105 -41601829 + AluSq SINE Alu 17 299 -14 183 322 44 22 chr18 44387138 44387228 -41601706 + L3 LINE CR1 568 659 -918 516 233 68 29 chr18 44388309 44388513 -41600421 + MER106B DNA MER1_type 1 1040 -19 1785 153 33 0 chr18 44388944 44389244 -41599690 + AluSx SINE Alu 1 310 -2 26 30 0 0 chr18 44389396 44389429 -41599505 + AT_rich Low_complexity Low_complexity 1 33 0 1310 271 44 35 chr18 44389436 44389981 -41598953 - L1MC4 LINE L1 -298 7744 7156 406 275 88 18 chr18 44390534 44390705 -41598229 - MER57B LTR ERV1 -248 186 4 31 26 0 0 chr18 44390814 44390852 -41598082 + AT_rich Low_complexity Low_complexity 1 38 0 5326 234 40 16 chr18 44391692 44393084 -41595850 + Charlie1a DNA MER1_type 1 1425 -30 31 96 0 0 chr18 44393326 44393420 -41595514 + AT_rich Low_complexity Low_complexity 1 94 0 26 74 0 0 chr18 44393725 44393779 -41595155 + AT_rich Low_complexity Low_complexity 1 54 0 321 333 57 71 chr18 44393948 44394284 -41594650 + L1ME LINE L1 2492 2822 -3324 287 345 85 25 chr18 44395588 44396047 -41592887 + L1ME LINE L1 5297 5790 -372 2262 103 0 0 chr18 44396296 44396596 -41592338 - AluSx SINE Alu -12 300 1 21 0 0 0 chr18 44396733 44396754 -41592180 + AT_rich Low_complexity Low_complexity 1 21 0 318 50 0 0 chr18 44396801 44396841 -41592093 + (TA)n Simple_repeat Simple_repeat 2 41 0 3023 223 62 39 chr18 44398296 44398492 -41590442 + L1MD2 LINE L1 983 1173 -5367 1528 181 46 4 chr18 44398492 44398773 -41590161 + AluJo SINE Alu 1 293 -19 3023 223 62 39 chr18 44398773 44399572 -41589362 + L1MD2 LINE L1 1173 2001 -4539 3693 120 18 23 chr18 44399572 44399598 -41589336 + L1PB2 LINE L1 5534 5559 -592 517 115 13 0 chr18 44399598 44399676 -41589258 + MADE1 DNA Mariner 2 80 0 3693 120 18 23 chr18 44399676 44400264 -41588670 + L1PB2 LINE L1 5559 6145 -6 393 194 32 0 chr18 44400367 44400460 -41588474 + L1PB2 LINE L1 6050 6145 -6 1382 219 125 33 chr18 44400554 44401160 -41587774 + L1MD2 LINE L1 1988 2649 -3891 2019 171 32 11 chr18 44401163 44401538 -41587396 + LTR1B LTR ERV1 1 383 -443 5409 242 95 60 chr18 44401539 44404369 -41584565 + L1MD2 LINE L1 2807 5737 -813 1971 159 52 2 chr18 44404380 44404782 -41584152 + L1MA8 LINE L1 5865 6286 -5 3457 237 89 9 chr18 44404795 44405750 -41583184 + L1MD2 LINE L1 5711 6741 -12 324 0 0 0 chr18 44405944 44405980 -41582954 + (CA)n Simple_repeat Simple_repeat 2 37 0 30 45 0 0 chr18 44406584 44406628 -41582306 + AT_rich Low_complexity Low_complexity 1 44 0 304 189 28 19 chr18 44406634 44406740 -41582194 + (TA)n Simple_repeat Simple_repeat 2 108 0 769 230 11 31 chr18 44406859 44407050 -41581884 - MER5A DNA MER1_type 0 189 3 196 195 0 73 chr18 44407438 44407479 -41581455 - L2 LINE L2 -688 2626 2589 * 269 314 48 8 chr18 44407473 44407597 -41581337 - MIR SINE MIR 0 262 134 608 316 100 0 chr18 44407597 44407847 -41581087 - LTR16A LTR ERVL -22 428 154 404 318 170 36 chr18 44408295 44408767 -41580167 + L2 LINE L2 2572 3139 -174 210 261 0 0 chr18 44408777 44408823 -41580111 + (TATG)n Simple_repeat Simple_repeat 3 48 0 223 299 47 47 chr18 44408883 44408990 -41579944 + L2 LINE L2 3168 3274 -39 23 0 0 0 chr18 44409161 44409184 -41579750 + AT_rich Low_complexity Low_complexity 1 23 0 2156 116 0 0 chr18 44410226 44410520 -41578414 + AluSx SINE Alu 1 294 -18 562 292 55 10 chr18 44411076 44411278 -41577656 + MIR SINE MIR 29 239 -23 715 280 83 34 chr18 44413721 44414121 -41574813 - MLT1H1 LTR MaLR 0 555 158 236 306 27 27 chr18 44415802 44415913 -41573021 - MIR SINE MIR -64 144 34 532 337 40 34 chr18 44416652 44417130 -41571804 - L1MC4a LINE L1 -1940 5868 5388 363 312 83 16 chr18 44417659 44417852 -41571082 + MIR SINE MIR 16 215 -47 321 26 0 0 chr18 44418163 44418201 -41570733 + (TG)n Simple_repeat Simple_repeat 2 39 0 257 136 23 0 chr18 44419726 44419770 -41569164 - L2 LINE L2 -4 3309 3265 237 33 0 0 chr18 44419824 44419854 -41569080 + (TA)n Simple_repeat Simple_repeat 2 31 0 852 250 0 0 chr18 44420397 44420573 -41568361 - MER45A DNA AcHobo 0 178 3 202 246 60 98 chr18 44420926 44421109 -41567825 - L2 LINE L2 -537 2777 2602 252 0 0 0 chr18 44421334 44421362 -41567572 + (TTAAA)n Simple_repeat Simple_repeat 4 31 0 188 283 150 0 chr18 44421487 44421547 -41567387 - L2 LINE L2 -989 2325 2257 182 317 42 25 chr18 44423182 44423302 -41565632 + L2 LINE L2 2725 2846 -468 202 264 125 28 chr18 44423423 44423495 -41565439 - MIR3 SINE MIR -29 179 101 2090 125 10 98 chr18 44424195 44424527 -41564407 + THE1C LTR MaLR 1 292 -83 2336 97 3 0 chr18 44424527 44424836 -41564098 + AluSg SINE Alu 1 310 0 2090 125 10 98 chr18 44424836 44424911 -41564023 + THE1C LTR MaLR 292 372 -3 21 36 0 0 chr18 44425141 44425169 -41563765 + AT_rich Low_complexity Low_complexity 1 28 0 185 349 58 0 chr18 44426328 44426414 -41562520 + L2 LINE L2 3185 3275 -38 2822 177 32 12 chr18 44426429 44427016 -41561918 - MER51C LTR ERV1 0 640 1 2153 114 3 0 chr18 44427518 44427815 -41561119 + AluSq SINE Alu 1 298 -15 247 314 24 30 chr18 44427843 44427984 -41560950 + MIR SINE MIR 71 212 -50 1562 177 0 37 chr18 44429538 44429837 -41559097 - AluJo SINE Alu -24 288 1 510 251 177 11 chr18 44429985 44430160 -41558774 + MIR SINE MIR 13 216 -46 21 0 0 0 chr18 44431109 44431130 -41557804 + GC_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr18 44431133 44431154 -41557780 + (T)n Simple_repeat Simple_repeat 1 21 0 1088 76 0 0 chr18 44431154 44431286 -41557648 - AluY SINE Alu -179 132 1 24 0 0 0 chr18 44431373 44431397 -41557537 + AT_rich Low_complexity Low_complexity 1 24 0 28 61 0 0 chr18 44431437 44431486 -41557448 + AT_rich Low_complexity Low_complexity 1 49 0 387 333 70 6 chr18 44433026 44433182 -41555752 - MIR3 SINE MIR -9 199 34 29 47 0 0 chr18 44433390 44433433 -41555501 + AT_rich Low_complexity Low_complexity 1 43 0 182 279 0 33 chr18 44433706 44433767 -41555167 + MIR SINE MIR 80 138 -124 332 382 87 24 chr18 44433782 44434036 -41554898 + L3 LINE CR1 1307 1576 -1 277 220 40 60 chr18 44434076 44434176 -41554758 + LTR48B LTR ERV1 4 101 -543 * 1238 213 21 80 chr18 44434149 44434555 -41554379 + MER39 LTR ERV1 176 690 -17 187 283 0 98 chr18 44434629 44434721 -41554213 + MIR SINE MIR 102 184 -78 264 192 13 77 chr18 44435172 44435250 -41553684 - MLT1H LTR MaLR -16 533 461 301 310 89 35 chr18 44435628 44435831 -41553103 - L3 LINE CR1 -113 1464 1251 22 0 0 0 chr18 44436266 44436288 -41552646 + AT_rich Low_complexity Low_complexity 1 22 0 311 255 111 70 chr18 44436622 44436865 -41552069 - L1M4 LINE L1 -3764 2270 2018 226 306 38 75 chr18 44437234 44437394 -41551540 - L3 LINE CR1 -814 763 610 31 26 0 0 chr18 44437405 44437443 -41551491 + AT_rich Low_complexity Low_complexity 1 38 0 1870 235 67 2 chr18 44438066 44438586 -41550348 + L1 LINE L1 4036 4589 -1557 1397 129 13 9 chr18 44438583 44438816 -41550118 - L1P4 LINE L1 -537 5628 5395 * 1265 171 0 18 chr18 44438816 44439044 -41549890 - L1P4 LINE L1 -2198 3948 3725 1509 226 80 45 chr18 44439056 44439454 -41549480 - L1M4 LINE L1 -5533 422 11 1026 237 7 3 chr18 44439468 44439755 -41549179 - L1M4 LINE L1 -3095 3051 2764 208 152 43 22 chr18 44439830 44439876 -41549058 + GA-rich Low_complexity Low_complexity 2 48 0 532 310 19 6 chr18 44440044 44440202 -41548732 + MIR SINE MIR 32 191 -71 656 372 88 7 chr18 44440343 44440765 -41548169 - L2 LINE L2 -609 2705 2250 191 403 0 15 chr18 44441226 44441293 -41547641 - L2 LINE L2 -84 3188 3123 207 333 0 44 chr18 44442454 44442544 -41546390 + MIR SINE MIR 127 212 -50 1317 72 0 0 chr18 44444067 44444234 -41544700 + AluY SINE Alu 119 285 -26 21 57 0 0 chr18 44445097 44445132 -41543802 + AT_rich Low_complexity Low_complexity 1 35 0 492 287 31 16 chr18 44445494 44445662 -41543272 - MIR3 SINE MIR -9 199 29 306 0 0 0 chr18 44445872 44445906 -41543028 + (A)n Simple_repeat Simple_repeat 1 34 0 261 0 0 0 chr18 44445937 44445966 -41542968 + (T)n Simple_repeat Simple_repeat 1 29 0 301 148 40 10 chr18 44446190 44446291 -41542643 + (TA)n Simple_repeat Simple_repeat 1 104 0 240 250 16 0 chr18 44446322 44446386 -41542548 + (TA)n Simple_repeat Simple_repeat 2 66 0 229 213 0 82 chr18 44446507 44446568 -41542366 + L2 LINE L2 3257 3312 -1 305 321 80 3 chr18 44446667 44446783 -41542151 - MIR SINE MIR -68 140 30 455 263 66 7 chr18 44447760 44447897 -41541037 - MIR SINE MIR -61 201 57 1869 223 142 2 chr18 44448434 44448879 -41540055 + MER6 DNA MER2_type 1 507 -358 683 140 0 0 chr18 44448879 44448979 -41539955 - LTR12 LTR ERV1 0 714 615 255 284 26 0 chr18 44448982 44449098 -41539836 - LTR30 LTR ERV1 -80 642 524 1284 150 17 21 chr18 44449163 44449397 -41539537 - LTR12 LTR ERV1 -481 233 1 1839 149 25 25 chr18 44449397 44449759 -41539175 + MER6 DNA MER2_type 504 865 0 1121 328 52 9 chr18 44449775 44450232 -41538702 + L2 LINE L2 2447 2923 -391 495 264 28 56 chr18 44450230 44450446 -41538488 + L2 LINE L2 3102 3311 -2 * 25 110 0 0 chr18 44451015 44451124 -41537810 + AT_rich Low_complexity Low_complexity 1 109 0 406 253 0 0 chr18 44452206 44452285 -41536649 - MER5A DNA MER1_type -107 82 4 23 33 0 0 chr18 44452442 44452472 -41536462 + AT_rich Low_complexity Low_complexity 1 30 0 332 232 80 18 chr18 44454552 44454664 -41534270 - MER94 DNA DNA -15 119 1 2453 146 52 9 chr18 44455223 44455649 -41533285 - MER65A LTR ERV1 -1 444 1 5436 150 11 25 chr18 44456105 44457550 -41531384 + L1PA16 LINE L1 4740 6166 0 3280 188 52 36 chr18 44457545 44457766 -41531168 + L1MA10 LINE L1 5593 5809 -525 * 2565 118 6 3 chr18 44457766 44458129 -41530805 - THE1B LTR MaLR 0 364 1 3280 188 52 36 chr18 44458129 44458636 -41530298 + L1MA10 LINE L1 5809 6333 -1 2093 115 14 0 chr18 44460051 44460346 -41528588 + AluSq SINE Alu 5 303 -10 343 94 0 0 chr18 44460358 44460411 -41528523 - MADE1 DNA Mariner 0 80 28 23 0 0 0 chr18 44460613 44460636 -41528298 + AT_rich Low_complexity Low_complexity 1 23 0 258 250 28 28 chr18 44461563 44461635 -41527299 - MER5B DNA MER1_type -59 119 48 971 195 83 64 chr18 44461649 44461962 -41526972 - L1MB7 LINE L1 -16 6168 5850 263 197 0 49 chr18 44461965 44462026 -41526908 - MER5B DNA MER1_type -118 60 3 1954 124 0 0 chr18 44463474 44463739 -41525195 + AluSx SINE Alu 22 286 -26 240 86 0 0 chr18 44463739 44463774 -41525160 + (TTAA)n Simple_repeat Simple_repeat 4 38 0 21 0 0 0 chr18 44464558 44464579 -41524355 + AT_rich Low_complexity Low_complexity 1 21 0 268 347 126 0 chr18 44464655 44464854 -41524080 + L2 LINE L2 2507 2730 -584 215 372 83 16 chr18 44465028 44465149 -41523785 + L2 LINE L2 3134 3262 -10 2267 104 0 16 chr18 44466250 44466566 -41522368 - AluSx SINE Alu -1 311 1 23 33 0 0 chr18 44468277 44468307 -41520627 + AT_rich Low_complexity Low_complexity 1 30 0 1838 165 0 10 chr18 44469562 44469853 -41519081 + AluSx SINE Alu 1 288 -24 2047 125 0 3 chr18 44469861 44470148 -41518786 + AluSg SINE Alu 1 286 -24 26 0 0 0 chr18 44470148 44470174 -41518760 + AT_rich Low_complexity Low_complexity 1 26 0 180 0 0 0 chr18 44470181 44470201 -41518733 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 1617 151 130 54 chr18 44470201 44470727 -41518207 + MER4A LTR ERV1 15 447 -18 193 333 59 59 chr18 44471152 44471287 -41517647 - MIR3 SINE MIR -7 201 67 23 33 0 0 chr18 44471604 44471634 -41517300 + AT_rich Low_complexity Low_complexity 1 30 0 297 0 0 0 chr18 44471663 44471696 -41517238 + (T)n Simple_repeat Simple_repeat 1 33 0 26 50 0 0 chr18 44522041 44522081 -41466853 + AT_rich Low_complexity Low_complexity 1 40 0 24 0 0 0 chr18 44522143 44522167 -41466767 + AT_rich Low_complexity Low_complexity 1 24 0 198 0 0 0 chr18 44523258 44523280 -41465654 + (TC)n Simple_repeat Simple_repeat 1 22 0 225 282 136 9 chr18 44524136 44524246 -41464688 + L2 LINE L2 3179 3302 -11 848 268 61 0 chr18 44524272 44524485 -41464449 + MIR SINE MIR 15 240 -22 960 244 53 0 chr18 44524576 44524838 -41464096 - L1M4 LINE L1 -750 5396 5121 273 361 33 28 chr18 44524891 44525104 -41463830 + L2 LINE L2 2156 2369 -945 1458 182 61 79 chr18 44526916 44527216 -41461718 - LTR54B LTR ERV1 -1 497 208 207 0 0 0 chr18 44527216 44527239 -41461695 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1458 182 61 79 chr18 44527239 44527444 -41461490 - LTR54B LTR ERV1 -290 208 1 282 236 0 0 chr18 44527444 44527499 -41461435 + L2 LINE L2 3259 3313 0 180 364 154 14 chr18 44529427 44529570 -41459364 - L3 LINE CR1 -3 1574 1412 232 343 126 35 chr18 44529582 44529780 -41459154 + MIR SINE MIR 11 226 -36 1145 124 55 5 chr18 44529823 44530126 -41458808 + AluSq SINE Alu 103 415 0 1812 167 13 10 chr18 44531036 44531347 -41457587 + AluSx SINE Alu 1 312 0 1803 179 10 10 chr18 44531630 44531942 -41456992 - AluJo SINE Alu 0 312 1 23 0 0 0 chr18 44532580 44532603 -41456331 + AT_rich Low_complexity Low_complexity 1 23 0 237 328 172 12 chr18 44535020 44535276 -41453658 - L3 LINE CR1 -27 1550 1254 201 364 132 8 chr18 44536307 44536428 -41452506 - L3 LINE CR1 -7 1570 1435 437 378 82 20 chr18 44536696 44537048 -41451886 - L3 LINE CR1 -207 1370 997 4895 69 2 0 chr18 44539361 44539988 -41448946 + L1PA7 LINE L1 5340 5967 -187 5282 51 3 0 chr18 44540088 44540738 -41448196 + L1PA7 LINE L1 5500 6151 -3 23 24 0 24 chr18 44540892 44540912 -41448022 + AT_rich Low_complexity Low_complexity 1 20 -20 1964 92 4 0 chr18 44540912 44541172 -41447762 + AluY SINE Alu 42 302 -9 23 24 0 24 chr18 44541172 44541192 -41447742 + AT_rich Low_complexity Low_complexity 20 40 0 221 372 22 49 chr18 44541478 44541661 -41447273 - MIR3 SINE MIR 0 208 31 2660 93 0 0 chr18 44541736 44542091 -41446843 + THE1A LTR MaLR 1 355 0 2012 148 7 0 chr18 44542464 44542762 -41446172 + AluSg SINE Alu 3 302 -8 285 281 66 8 chr18 44543608 44543729 -41445205 - MIR SINE MIR -71 191 64 210 71 0 0 chr18 44545520 44545548 -41443386 + (GGA)n Simple_repeat Simple_repeat 3 30 0 1905 137 133 3 chr18 44545564 44545886 -41443048 + THE1B LTR MaLR 1 364 0 917 317 161 16 chr18 44546852 44547492 -41441442 + L3 LINE CR1 773 1505 -72 5789 102 126 71 chr18 44547524 44549017 -41439917 + pTR5 LTR ERV1 589 2437 -1 25 0 0 0 chr18 44551034 44551059 -41437875 + AT_rich Low_complexity Low_complexity 1 25 0 680 198 8 0 chr18 44551344 44551470 -41437464 + FLAM_C SINE Alu 2 128 -5 611 293 40 5 chr18 44551628 44551826 -41437108 - MIR SINE MIR -2 260 56 366 264 11 0 chr18 44552604 44552695 -41436239 - AluS SINE Alu -211 92 1 31 58 0 0 chr18 44553167 44553219 -41435715 + AT_rich Low_complexity Low_complexity 1 52 0 428 297 104 39 chr18 44553382 44553774 -41435160 - LTR33 LTR ERVL 0 521 76 479 210 90 0 chr18 44553996 44554096 -41434838 + FLAM_A SINE Alu 1 109 -33 276 30 0 0 chr18 44554099 44554132 -41434802 + (CAAT)n Simple_repeat Simple_repeat 4 36 0 836 117 0 0 chr18 44554424 44554544 -41434390 - AluY SINE Alu 0 311 192 197 186 70 0 chr18 44555267 44555310 -41433624 + L2 LINE L2 3268 3313 0 362 327 10 0 chr18 44555405 44555506 -41433428 - L2 LINE L2 -8 3264 3163 26 0 0 0 chr18 44555886 44555912 -41433022 + AT_rich Low_complexity Low_complexity 1 26 0 1652 183 3 20 chr18 44555979 44556279 -41432655 + AluJo SINE Alu 1 295 -17 186 342 53 0 chr18 44556996 44557072 -41431862 - L2 LINE L2 0 3313 3234 278 286 0 0 chr18 44558433 44558510 -41430424 + A-rich Low_complexity Low_complexity 1 77 0 802 304 0 0 chr18 44558996 44559216 -41429718 - MER58A DNA MER1_type -4 220 1 551 189 153 120 chr18 44559229 44559562 -41429372 - LTR16A1 LTR ERVL 0 457 114 1042 159 12 0 chr18 44559658 44559828 -41429106 + AluJb SINE Alu 135 306 -6 279 279 62 45 chr18 44559903 44560082 -41428852 - MLT1H LTR MaLR -249 300 119 740 291 181 22 chr18 44560182 44560591 -41428343 + L2 LINE L2 2831 3304 -9 325 228 62 63 chr18 44560883 44560910 -41428024 + HAL1b LINE L1 1204 1230 -118 252 0 0 0 chr18 44560910 44560938 -41427996 + (CA)n Simple_repeat Simple_repeat 2 29 0 325 228 62 63 chr18 44560938 44561054 -41427880 + HAL1b LINE L1 1230 1318 -30 197 280 187 0 chr18 44561942 44562017 -41426917 + MIR SINE MIR 164 252 -10 24 32 0 0 chr18 44563040 44563071 -41425863 + AT_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr18 44563291 44563327 -41425607 + AT_rich Low_complexity Low_complexity 1 36 0 1553 233 34 22 chr18 44564211 44564618 -41424316 + MER92A LTR ERV1 1 412 0 26 30 0 0 chr18 44565791 44565824 -41423110 + AT_rich Low_complexity Low_complexity 1 33 0 401 337 83 0 chr18 44566250 44566404 -41422530 + MIR SINE MIR 35 200 -62 851 249 96 79 chr18 44566816 44567093 -41421841 - MLT1G1 LTR MaLR -183 412 124 213 39 0 0 chr18 44567093 44567119 -41421815 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 851 249 96 79 chr18 44567119 44567246 -41421688 - MLT1G1 LTR MaLR -471 124 1 216 0 0 0 chr18 44567714 44567738 -41421196 + (A)n Simple_repeat Simple_repeat 1 24 0 229 139 0 0 chr18 44567751 44567787 -41421147 + MER63 DNA MER1_type 676 711 -349 267 349 0 0 chr18 44567802 44567885 -41421049 + MER63 DNA MER1_type 979 1061 -1 234 311 23 45 chr18 44567989 44568121 -41420813 - MLT1H LTR MaLR -375 174 46 23 0 0 0 chr18 44569756 44569779 -41419155 + AT_rich Low_complexity Low_complexity 1 23 0 337 268 54 36 chr18 44569848 44569960 -41418974 + L1ME LINE L1 3 116 -5954 341 239 22 0 chr18 44570325 44570417 -41418517 + L1M4 LINE L1 4737 4830 -1316 974 192 39 24 chr18 44570588 44570796 -41418138 - MER21B LTR ERV1 -17 846 636 1901 170 59 0 chr18 44570800 44571124 -41417810 + MER61A LTR ERV1 1 343 0 21523 126 23 29 chr18 44571124 44572482 -41416452 + MER61A-int LTR ERV1 1 1365 -3852 2123 138 48 20 chr18 44572482 44572836 -41416098 - THE1B LTR MaLR 0 364 1 21523 126 23 29 chr18 44572836 44575862 -41413072 + MER61A-int LTR ERV1 1365 5209 -8 249 57 0 0 chr18 44575864 44575899 -41413035 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1590 135 0 9 chr18 44575902 44576131 -41412803 - AluSx SINE Alu -32 280 54 14186 110 34 14 chr18 44576133 44579233 -41409701 + MER61A-int LTR ERV1 1970 5210 -7 953 237 217 4 chr18 44579240 44579493 -41409441 + MER61A LTR ERV1 1 307 -36 473 218 0 65 chr18 44579497 44579621 -41409313 + MER61A-int LTR ERV1 5960 6075 -683 1606 181 105 3 chr18 44579622 44579954 -41408980 + LTR47A LTR ERVL 1 366 -86 413 294 115 36 chr18 44579970 44580545 -41408389 + L1M4 LINE L1 2387 3006 -3140 355 231 91 65 chr18 44580553 44580739 -41408195 + L1M4 LINE L1 4298 4488 -1658 2356 71 3 0 chr18 44580807 44581103 -41407831 - AluY SINE Alu -14 297 1 3419 156 80 27 chr18 44581163 44581838 -41407096 + MER50 LTR ERV1 1 711 -23 401 291 74 40 chr18 44581989 44582315 -41406619 + L1M4 LINE L1 4826 5162 -984 483 296 39 89 chr18 44582349 44582789 -41406145 + L1M4 LINE L1 3863 4280 -1866 320 304 35 0 chr18 44583820 44583935 -41404999 - L2 LINE L2 -6 3307 3189 22 35 0 0 chr18 44584116 44584145 -41404789 + AT_rich Low_complexity Low_complexity 1 29 0 2273 29 0 11 chr18 44584185 44584489 -41404445 - L1PA3 LINE L1 0 6155 5878 369 0 0 0 chr18 44584920 44584961 -41403973 + (TG)n Simple_repeat Simple_repeat 2 42 0 2205 219 63 43 chr18 44585078 44585755 -41403179 - LTR8 LTR ERV1 0 691 1 5774 159 15 22 chr18 44586634 44588207 -41400727 + L1MA4 LINE L1 4730 6294 -6 391 267 33 25 chr18 44588532 44588652 -41400282 + MER94 DNA DNA 12 132 -2 224 389 7 27 chr18 44589897 44590046 -41398888 - L3 LINE CR1 -110 1467 1322 332 167 0 0 chr18 44590048 44590102 -41398832 + MLT1J1 LTR MaLR 52 105 -521 1092 207 96 40 chr18 44590160 44590411 -41398523 + MLT1E2 LTR MaLR 360 624 -2 397 161 203 59 chr18 44590477 44590595 -41398339 + MSTB1 LTR MaLR 1 135 -297 429 198 10 21 chr18 44590595 44590691 -41398243 + MSTB1 LTR MaLR 338 432 0 1176 165 116 60 chr18 44590735 44591022 -41397912 - AluJo SINE Alu 0 302 1 24 0 0 0 chr18 44591225 44591249 -41397685 + AT_rich Low_complexity Low_complexity 1 24 0 398 235 39 29 chr18 44592256 44592358 -41396576 + MLT1J1 LTR MaLR 81 183 -263 190 254 68 0 chr18 44593275 44593334 -41395600 + MIR3 SINE MIR 118 180 -28 493 290 175 9 chr18 44593653 44593870 -41395064 - MIR SINE MIR -8 254 2 26 30 0 0 chr18 44594774 44594807 -41394127 + AT_rich Low_complexity Low_complexity 1 33 0 296 198 0 12 chr18 44595130 44595211 -41393723 + (TA)n Simple_repeat Simple_repeat 1 80 0 222 118 0 0 chr18 44596000 44596034 -41392900 + (CA)n Simple_repeat Simple_repeat 2 35 0 187 284 0 30 chr18 44596188 44596255 -41392679 + L3 LINE CR1 1512 1576 -1 * 242 371 53 49 chr18 44596215 44596460 -41392474 + L2 LINE L2 2386 2631 -683 24 67 0 0 chr18 44596602 44596647 -41392287 + AT_rich Low_complexity Low_complexity 1 45 0 268 331 63 0 chr18 44597257 44597404 -41391530 + MIR SINE MIR 46 212 -50 180 313 31 31 chr18 44597750 44597814 -41391120 - MIR SINE MIR -6 256 193 2319 68 0 16 chr18 44598356 44598664 -41390270 - AluY SINE Alu -8 303 1 219 263 0 0 chr18 44600206 44600263 -41388671 + (TTA)n Simple_repeat Simple_repeat 2 58 0 298 77 22 0 chr18 44601018 44601062 -41387872 - MLT2A2 LTR ERVL 0 453 397 189 0 0 0 chr18 44601062 44601083 -41387851 + (TG)n Simple_repeat Simple_repeat 2 22 0 315 181 0 0 chr18 44601111 44601183 -41387751 + (CA)n Simple_repeat Simple_repeat 2 73 0 310 252 64 1 chr18 44601413 44601535 -41387399 - LTR39 LTR ERV1 -239 664 401 330 89 0 0 chr18 44601583 44601628 -41387306 - MER49 LTR ERV1 -638 285 241 2203 164 45 20 chr18 44601647 44602122 -41386812 - MLT2A2 LTR ERVL -40 510 1 1229 264 23 17 chr18 44602795 44603140 -41385794 - MER4D LTR ERV1 -8 895 549 1734 146 14 4 chr18 44603188 44603468 -41385466 - MER49 LTR ERV1 -638 285 3 37 52 0 0 chr18 44603713 44603771 -41385163 + AT_rich Low_complexity Low_complexity 1 58 0 203 257 0 29 chr18 44603788 44603858 -41385076 + GA-rich Low_complexity Low_complexity 1 68 0 412 71 14 14 chr18 44603935 44604005 -41384929 + (TA)n Simple_repeat Simple_repeat 1 70 0 21 89 0 0 chr18 44604023 44604079 -41384855 + AT_rich Low_complexity Low_complexity 1 56 0 232 284 134 17 chr18 44605028 44605267 -41383667 - L1ME LINE L1 -226 5895 5629 551 155 0 4 chr18 44605687 44605907 -41383027 - AluJb SINE Alu -7 305 2 783 235 83 18 chr18 44605908 44606125 -41382809 + MLT1A2 LTR MaLR 140 370 -4 302 276 51 10 chr18 44606448 44606546 -41382388 - L1MC4 LINE L1 -1317 6725 6624 * 312 275 0 0 chr18 44606467 44606547 -41382387 + L1MC4 LINE L1 6613 6692 -1350 202 277 27 45 chr18 44607357 44607469 -41381465 + L2 LINE L2 3099 3208 -105 278 362 49 13 chr18 44607608 44607832 -41381102 - MARNA DNA Mariner -313 273 42 228 163 0 0 chr18 44608966 44609009 -41379925 + (TG)n Simple_repeat Simple_repeat 1 43 0 217 184 0 41 chr18 44609774 44609823 -41379111 - MIR3 SINE MIR -2 206 160 266 262 106 28 chr18 44610221 44610362 -41378572 - MLT1I LTR MaLR -257 152 1 22 0 0 0 chr18 44610466 44610488 -41378446 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr18 44610724 44610745 -41378189 + AT_rich Low_complexity Low_complexity 1 21 0 3465 158 39 16 chr18 44610799 44611469 -41377465 - Tigger3(Golem) DNA MER2_type -2 3027 2343 261 0 0 0 chr18 44611469 44611498 -41377436 + (T)n Simple_repeat Simple_repeat 1 29 0 3531 213 76 43 chr18 44612196 44613264 -41375670 - Tigger3b DNA MER2_type -126 1105 3 282 338 71 0 chr18 44613684 44613909 -41375025 - L1M4 LINE L1 -2203 3943 3703 1611 51 0 0 chr18 44614133 44614329 -41374605 - L1PA3 LINE L1 -3 6152 5957 180 77 0 0 chr18 44614932 44614958 -41373976 + (TTTTTA)n Simple_repeat Simple_repeat 5 30 0 2219 250 62 45 chr18 44615068 44616413 -41372521 - L1ME2 LINE L1 0 6233 4800 528 239 86 37 chr18 44616462 44616788 -41372146 - L1ME2 LINE L1 -5197 1008 667 4127 30 4 0 chr18 44616836 44617332 -41371602 - L1PA3 LINE L1 0 6155 5658 2087 99 20 7 chr18 44617432 44617736 -41371198 - AluSp SINE Alu -5 308 1 281 317 66 48 chr18 44617988 44618259 -41370675 - L1ME2 LINE L1 -5953 443 168 266 339 70 9 chr18 44618284 44618399 -41370535 + MIR3 SINE MIR 85 206 -2 22 0 0 0 chr18 44618604 44618626 -41370308 + AT_rich Low_complexity Low_complexity 1 22 0 208 83 42 42 chr18 44618939 44618987 -41369947 + A-rich Low_complexity Low_complexity 2 49 0 1188 194 88 67 chr18 44619617 44619946 -41368988 + MER2 DNA MER2_type 2 337 -8 4515 228 57 9 chr18 44619973 44621453 -41367481 + L1MC1 LINE L1 4783 6333 0 246 338 0 70 chr18 44621548 44621705 -41367229 + L3 LINE CR1 919 1064 -513 28 0 0 0 chr18 44622182 44622210 -41366724 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr18 44623146 44623167 -41365767 + AT_rich Low_complexity Low_complexity 1 21 0 2091 101 14 3 chr18 44623503 44623800 -41365134 + AluSx SINE Alu 3 302 -10 28 29 0 0 chr18 44624669 44624704 -41364230 + AT_rich Low_complexity Low_complexity 1 35 0 232 406 14 21 chr18 44626579 44626722 -41362212 + MIR3 SINE MIR 42 183 -25 2278 113 0 0 chr18 44626849 44627151 -41361783 - AluY SINE Alu -8 303 2 1131 156 5 0 chr18 44627650 44627849 -41361085 - AluY SINE Alu -110 201 2 360 278 30 23 chr18 44628231 44628364 -41360570 - L2 LINE L2 -245 3068 2935 1504 175 4 4 chr18 44628427 44628679 -41360255 + AluJb SINE Alu 38 289 -23 476 310 131 61 chr18 44628845 44629303 -41359631 - MLT1K LTR MaLR -13 575 86 2119 174 66 15 chr18 44629897 44630304 -41358630 - MSTC LTR MaLR 0 428 1 3992 264 44 58 chr18 44630304 44631978 -41356956 - MSTC-int LTR MaLR -1 1650 1 1634 155 85 126 chr18 44631978 44632114 -41356820 - MSTC LTR MaLR 0 428 288 1798 170 0 29 chr18 44632114 44632426 -41356508 - AluJo SINE Alu -7 305 3 1634 155 85 126 chr18 44632426 44632448 -41356486 - MSTC LTR MaLR -140 288 267 2097 102 0 27 chr18 44632448 44632741 -41356193 - AluY SINE Alu -26 285 1 2483 71 0 0 chr18 44632750 44633059 -41355875 - AluY SINE Alu -2 309 1 979 237 16 82 chr18 44633059 44633375 -41355559 - AluJb SINE Alu -6 296 2 1634 155 85 126 chr18 44633375 44633650 -41355284 - MSTC LTR MaLR -167 261 1 187 301 8 53 chr18 44634183 44634258 -41354676 + MIR SINE MIR 45 116 -102 5606 170 24 22 chr18 44634480 44636334 -41352600 - L1PB1 LINE L1 -8 6143 4291 2192 115 7 0 chr18 44636334 44636639 -41352295 - AluSp SINE Alu -6 307 1 5606 170 24 22 chr18 44636639 44636851 -41352083 - L1PB1 LINE L1 -1860 4291 4081 3586 199 8 0 chr18 44636854 44637563 -41351371 + L1 LINE L1 3510 4224 -1922 1998 149 0 3 chr18 44638165 44638460 -41350474 - AluSq SINE Alu -17 296 3 195 42 0 0 chr18 44639321 44639345 -41349589 + (TG)n Simple_repeat Simple_repeat 2 25 0 201 147 0 0 chr18 44640036 44640070 -41348864 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 598 76 0 0 chr18 44640591 44640670 -41348264 + MADE1 DNA Mariner 1 79 -1 2066 149 8 28 chr18 44641202 44641564 -41347370 + THE1A LTR MaLR 1 355 0 23 33 0 0 chr18 44641687 44641717 -41347217 + AT_rich Low_complexity Low_complexity 1 30 0 284 329 33 66 chr18 44641777 44641929 -41347005 + MER5A DNA MER1_type 43 189 0 259 260 21 21 chr18 44642702 44642798 -41346136 - L1P LINE L1 -992 5154 5059 3388 140 21 5 chr18 44642799 44643017 -41345917 + L1PB1 LINE L1 5566 5779 -372 423 0 0 0 chr18 44643017 44643064 -41345870 + (TA)n Simple_repeat Simple_repeat 1 47 0 3388 140 21 5 chr18 44643064 44643422 -41345512 + L1PB1 LINE L1 5779 6151 0 187 302 122 36 chr18 44643506 44643645 -41345289 - L3 LINE CR1 -307 1270 1120 22 35 0 0 chr18 44644061 44644090 -41344844 + AT_rich Low_complexity Low_complexity 1 29 0 200 33 0 33 chr18 44644338 44644368 -41344566 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 6187 144 28 14 chr18 44644373 44645495 -41343439 - L1MA2 LINE L1 0 7723 6618 274 45 45 0 chr18 44645495 44645539 -41343395 + (TTTG)n Simple_repeat Simple_repeat 4 49 0 1635 184 0 21 chr18 44645539 44645821 -41343113 - AluJo SINE Alu -34 278 3 6187 144 28 14 chr18 44645821 44646199 -41342735 - L1MA2 LINE L1 -1104 6619 6202 256 195 88 0 chr18 44646190 44646303 -41342631 - L1MA2 LINE L1 -2947 4618 4496 * 18069 178 53 12 chr18 44646296 44649721 -41339213 - L1MA2 LINE L1 -3986 3579 13 444 123 0 0 chr18 44650176 44650249 -41338685 + (CA)n Simple_repeat Simple_repeat 2 74 0 332 229 2 13 chr18 44650485 44650594 -41338340 - L1MDb LINE L1 -5064 1006 897 478 198 0 0 chr18 44650611 44650712 -41338222 - L1MA9 LINE L1 -38 6274 6174 433 256 132 12 chr18 44650740 44650982 -41337952 - L1MDb LINE L1 -5182 888 618 288 274 131 7 chr18 44650998 44651151 -41337783 + L1MC4a LINE L1 6059 6230 -1578 268 155 28 28 chr18 44651161 44651232 -41337702 + (TATG)n Simple_repeat Simple_repeat 2 72 0 227 218 0 0 chr18 44651379 44651434 -41337500 + L1MC4a LINE L1 6413 6467 -1341 833 284 81 19 chr18 44651518 44651838 -41337096 + L1MC4 LINE L1 6723 7062 -980 393 58 0 0 chr18 44651940 44651992 -41336942 + (CA)n Simple_repeat Simple_repeat 2 53 0 317 320 45 45 chr18 44652187 44652409 -41336525 + L1MC4 LINE L1 7274 7495 -547 470 321 77 19 chr18 44652426 44652961 -41335973 + L1MC5 LINE L1 7349 7914 -47 188 159 0 23 chr18 44653628 44653672 -41335262 + T-rich Low_complexity Low_complexity 2 44 0 180 0 0 0 chr18 44653670 44653690 -41335244 + (TTG)n Simple_repeat Simple_repeat 2 21 0 * 2052 139 3 7 chr18 44654053 44654363 -41334571 - AluSq SINE Alu -2 311 3 23 68 0 0 chr18 44654660 44654704 -41334230 + AT_rich Low_complexity Low_complexity 1 44 0 32 0 0 0 chr18 44655013 44655045 -41333889 + AT_rich Low_complexity Low_complexity 1 32 0 309 51 0 0 chr18 44656261 44656300 -41332634 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 245 303 13 0 chr18 44657062 44657138 -41331796 - MIR SINE MIR -109 153 77 219 36 0 0 chr18 44658166 44658194 -41330740 + (T)n Simple_repeat Simple_repeat 1 28 0 272 299 190 33 chr18 44658873 44659057 -41329877 - MIR SINE MIR -48 214 2 23 0 0 0 chr18 44659285 44659308 -41329626 + AT_rich Low_complexity Low_complexity 1 23 0 2794 137 9 43 chr18 44660838 44661372 -41327562 - L1MA10 LINE L1 -2 6332 5817 252 122 0 0 chr18 44661868 44661909 -41327025 + (CATA)n Simple_repeat Simple_repeat 4 44 0 649 322 144 31 chr18 44664801 44665478 -41323456 - L2 LINE L2 0 3313 2556 220 331 83 45 chr18 44665478 44665611 -41323323 - L2 LINE L2 -895 2419 2282 283 332 89 59 chr18 44665696 44665898 -41323036 + MIR SINE MIR 5 212 -50 205 200 20 0 chr18 44665958 44666008 -41322926 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 203 355 0 16 chr18 44666030 44666092 -41322842 + MER5A DNA MER1_type 84 144 -45 243 0 0 0 chr18 44666648 44666675 -41322259 + (T)n Simple_repeat Simple_repeat 1 27 0 215 302 0 0 chr18 44667081 44667134 -41321800 - MIR SINE MIR -132 76 24 23 33 0 0 chr18 44667372 44667402 -41321532 + AT_rich Low_complexity Low_complexity 1 30 0 2203 160 16 5 chr18 44667681 44668062 -41320872 + MLT1B LTR MaLR 1 385 -5 466 321 38 16 chr18 44668990 44669174 -41319760 - MIR SINE MIR -70 192 5 2151 123 7 0 chr18 44669570 44669871 -41319063 - AluSx SINE Alu -9 303 1 198 0 0 0 chr18 44669918 44669940 -41318994 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 22 0 0 0 chr18 44671132 44671154 -41317780 + AT_rich Low_complexity Low_complexity 1 22 0 32 81 0 0 chr18 44671311 44671385 -41317549 + AT_rich Low_complexity Low_complexity 1 74 0 12914 88 16 3 chr18 44671385 44675088 -41313846 - L1PA7 LINE L1 -15 6454 2651 11754 114 26 27 chr18 44675091 44677037 -41311897 - L1PA7 LINE L1 -4481 1980 1 24 32 0 0 chr18 44677090 44677121 -41311813 + AT_rich Low_complexity Low_complexity 1 31 0 328 182 0 13 chr18 44677198 44677275 -41311659 - L1MA10 LINE L1 -5 6329 6254 1612 269 21 2 chr18 44677298 44677730 -41311204 - L1ME1 LINE L1 -327 5839 5400 201 349 36 0 chr18 44678455 44678538 -41310396 + MIR SINE MIR 100 185 -77 23 0 0 0 chr18 44682120 44682143 -41306791 + AT_rich Low_complexity Low_complexity 1 23 0 276 300 61 54 chr18 44682184 44682327 -41306607 - MIR SINE MIR -60 148 4 23 54 0 0 chr18 44682715 44682752 -41306182 + AT_rich Low_complexity Low_complexity 1 37 0 207 389 43 19 chr18 44683490 44683652 -41305282 + MIR3 SINE MIR 31 196 -12 21 36 0 0 chr18 44683974 44684002 -41304932 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr18 44684245 44684267 -41304667 + AT_rich Low_complexity Low_complexity 1 22 0 383 374 27 11 chr18 44687328 44687515 -41301419 + MIR3 SINE MIR 14 203 -5 33 90 0 0 chr18 44690619 44690708 -41298226 + AT_rich Low_complexity Low_complexity 1 89 0 1441 233 7 0 chr18 44692526 44692818 -41296116 + AluJb SINE Alu 1 294 -18 22 35 0 0 chr18 44693210 44693239 -41295695 + AT_rich Low_complexity Low_complexity 1 29 0 201 74 0 0 chr18 44693319 44693346 -41295588 + (TG)n Simple_repeat Simple_repeat 2 28 0 2168 107 3 3 chr18 44694243 44694551 -41294383 + AluSc SINE Alu 1 308 -1 388 300 63 40 chr18 44694928 44695559 -41293375 + L1ME3A LINE L1 1317 2121 -4704 501 271 92 58 chr18 44695820 44696167 -41292767 + L1ME3A LINE L1 2524 2882 -3943 474 139 0 0 chr18 44696207 44696286 -41292648 + MADE1 DNA Mariner 1 79 -1 309 287 76 21 chr18 44696332 44696621 -41292313 + L1ME3A LINE L1 2836 3140 -3504 44038 40 1 1 chr18 44696725 44702880 -41286054 + L1PA4 LINE L1 2 6152 -3 276 266 0 32 chr18 44702886 44702980 -41285954 + L1ME3A LINE L1 3408 3498 -3146 1299 273 109 35 chr18 44703064 44703956 -41284978 + L1ME3A LINE L1 5688 6646 -22 282 264 6 66 chr18 44705686 44705853 -41283081 + GA-rich Low_complexity Low_complexity 2 158 0 2100 137 0 6 chr18 44705949 44706263 -41282671 + AluSx SINE Alu 1 312 0 2952 223 68 34 chr18 44706263 44707595 -41281339 - L1MC/D LINE L1 -650 5592 4211 230 355 93 12 chr18 44707895 44708067 -41280867 - L2 LINE L2 -5 3308 3123 261 0 0 0 chr18 44708547 44708576 -41280358 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4370 18 0 0 chr18 44708878 44709384 -41279550 - L1PA2 LINE L1 -1787 4359 3854 8838 23 0 0 chr18 44709384 44711202 -41277732 + L1PA2 LINE L1 4328 6153 -2 1636 174 0 45 chr18 44711557 44711868 -41277066 - AluJb SINE Alu -15 297 1 25 65 0 0 chr18 44713114 44713160 -41275774 + AT_rich Low_complexity Low_complexity 1 46 0 21 36 0 0 chr18 44713253 44713281 -41275653 + AT_rich Low_complexity Low_complexity 1 28 0 303 273 53 53 chr18 44714517 44714649 -41274285 - MIR3 SINE MIR -7 201 70 213 182 0 0 chr18 44715709 44715742 -41273192 + (TG)n Simple_repeat Simple_repeat 2 34 0 189 121 0 0 chr18 44715940 44715973 -41272961 + (T)n Simple_repeat Simple_repeat 1 33 0 388 247 12 0 chr18 44718882 44718967 -41269967 + MIR SINE MIR 70 155 -107 3059 228 17 5 chr18 44718969 44719601 -41269333 - MER82 DNA MER2_type 0 653 14 1769 205 11 14 chr18 44719857 44720223 -41268711 - MLT1A1 LTR MaLR 0 365 1 689 294 186 11 chr18 44720456 44720806 -41268128 + MLT1J1 LTR MaLR 1 411 -35 192 412 18 44 chr18 44720828 44720942 -41267992 + MIR SINE MIR 33 143 -65 1419 236 75 47 chr18 44721993 44722459 -41266475 + MLT1D LTR MaLR 27 505 0 717 306 83 24 chr18 44722469 44722937 -41265997 - L1ME LINE L1 -398 5764 5269 269 191 0 63 chr18 44723879 44723942 -41264992 + L2 LINE L2 3213 3271 -1 785 243 36 31 chr18 44724396 44724618 -41264316 - MER58A DNA MER1_type -1 223 1 449 371 76 40 chr18 44724725 44725293 -41263641 - L2 LINE L2 -470 2844 2257 390 343 114 8 chr18 44726534 44726770 -41262164 - MIR SINE MIR 0 262 2 24 0 0 0 chr18 44728123 44728147 -41260787 + AT_rich Low_complexity Low_complexity 1 24 0 305 180 38 60 chr18 44728271 44728454 -41260480 + (TA)n Simple_repeat Simple_repeat 1 179 0 216 146 12 94 chr18 44728467 44728638 -41260296 + (CATATA)n Simple_repeat Simple_repeat 2 158 0 204 188 38 30 chr18 44728684 44728817 -41260117 + (CATATA)n Simple_repeat Simple_repeat 3 136 0 264 160 64 64 chr18 44728835 44728929 -41260005 - Charlie7 DNA MER1_type -6 2606 2513 762 284 81 62 chr18 44728952 44729548 -41259386 + L1M4 LINE L1 3594 4200 -1946 438 348 64 38 chr18 44729595 44729986 -41258948 - MLT1I LTR MaLR -1 408 8 436 297 151 52 chr18 44729994 44730398 -41258536 + L1M4 LINE L1 4246 4689 -1457 285 274 34 57 chr18 44730475 44730650 -41258284 + L1M4 LINE L1 4808 4978 -1168 858 213 0 0 chr18 44731587 44731845 -41257089 + CT-rich Low_complexity Low_complexity 1 258 0 2139 24 0 0 chr18 44732534 44732782 -41256152 - L1PA4 LINE L1 -1 6154 5907 1436 123 15 0 chr18 44733951 44734155 -41254779 + AluSg/x SINE Alu 85 291 -21 16526 26 0 0 chr18 44734768 44737485 -41251449 + L1PA3 LINE L1 3435 6152 -3 269 266 0 32 chr18 44737491 44737585 -41251349 + L1ME3A LINE L1 2910 3000 -3146 1222 273 109 35 chr18 44737669 44738561 -41250373 + L1ME3A LINE L1 5190 6148 -22 282 264 6 66 chr18 44740289 44740456 -41248478 + GA-rich Low_complexity Low_complexity 2 158 0 2124 137 0 6 chr18 44740552 44740866 -41248068 + AluSx SINE Alu 1 312 0 2864 223 68 34 chr18 44740866 44742198 -41246736 - L1MC/D LINE L1 -650 5592 4211 212 331 111 29 chr18 44742498 44742670 -41246264 - L2 LINE L2 -5 3308 3123 261 0 0 0 chr18 44743150 44743179 -41245755 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4400 20 0 0 chr18 44743481 44743991 -41244943 - L1P1 LINE L1 -1787 4359 3850 * 8879 17 6 0 chr18 44743987 44745466 -41243468 + L1P1 LINE L1 4328 5816 -339 7809 14 1 0 chr18 44745566 44746804 -41242130 + L1PA2 LINE L1 4944 6185 0 1249 210 77 44 chr18 44747136 44747616 -41241318 + LTR54B LTR ERV1 1 496 -2 195 139 0 0 chr18 44748413 44748449 -41240485 + (TG)n Simple_repeat Simple_repeat 1 36 0 1750 153 3 27 chr18 44748833 44749187 -41239747 - MER4A LTR ERV1 0 664 261 522 115 42 21 chr18 44749187 44749283 -41239651 - MER4A LTR ERV1 -566 98 1 334 205 0 60 chr18 44749348 44749431 -41239503 - L2 LINE L2 -51 3262 3185 28 61 0 0 chr18 44750687 44750736 -41238198 + AT_rich Low_complexity Low_complexity 1 49 0 234 371 133 0 chr18 44750776 44750881 -41238053 - L2 LINE L2 -1 3271 3153 219 237 53 13 chr18 44751241 44751317 -41237617 - L2 LINE L2 -5 3267 3189 420 286 9 0 chr18 44751917 44752029 -41236905 - MER5A DNA MER1_type -6 183 71 2095 134 7 0 chr18 44752186 44752485 -41236449 + AluSx SINE Alu 1 301 -11 219 36 0 0 chr18 44754105 44754133 -41234801 + (TG)n Simple_repeat Simple_repeat 1 28 0 2056 119 0 7 chr18 44754133 44754417 -41234517 - AluSq SINE Alu -29 284 1 1299 236 50 34 chr18 44754419 44755244 -41233690 - L1MC/D LINE L1 -653 5983 5154 913 241 32 10 chr18 44755308 44755619 -41233315 - L1MC/D LINE L1 -2241 4299 3982 5881 168 13 6 chr18 44755643 44756004 -41232930 - L1PB1 LINE L1 0 6151 5794 504 0 0 0 chr18 44756004 44756060 -41232874 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 5881 168 13 6 chr18 44756060 44757752 -41231182 - L1PB1 LINE L1 -357 5794 4081 2809 191 0 21 chr18 44757765 44758160 -41230774 + L1 LINE L1 3510 3891 -2255 4076 78 28 2 chr18 44758160 44758725 -41230209 - LTR19B LTR ERV1 0 580 1 2809 191 0 21 chr18 44758725 44758904 -41230030 + L1 LINE L1 3891 4072 -2074 945 304 5 13 chr18 44758899 44759280 -41229654 - L1MC/D LINE L1 -2552 3988 3611 * 4970 221 83 20 chr18 44759277 44761083 -41227851 - L1MDa LINE L1 -3687 2853 945 180 97 0 0 chr18 44761111 44761142 -41227792 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1890 209 52 106 chr18 44761142 44761663 -41227271 - MLT2B3 LTR ERVL -58 496 4 1595 229 96 75 chr18 44761664 44762214 -41226720 - L1MDa LINE L1 -5591 949 388 22 35 0 0 chr18 44762214 44762243 -41226691 + AT_rich Low_complexity Low_complexity 1 29 0 314 203 0 17 chr18 44762244 44762303 -41226631 + AluS SINE Alu 221 278 -23 1173 218 79 93 chr18 44762305 44762672 -41226262 - L1MDa LINE L1 -6155 385 24 248 280 119 25 chr18 44762752 44762870 -41226064 - L2 LINE L2 -5 3267 3139 226 299 308 5 chr18 44763405 44763616 -41225318 + L2 LINE L2 3026 3300 -13 201 224 0 0 chr18 44764656 44764714 -41224220 + GA-rich Low_complexity Low_complexity 2 59 0 1980 182 22 77 chr18 44764946 44765390 -41223544 - MSTB1 LTR MaLR -12 420 1 781 270 0 0 chr18 44765524 44765713 -41223221 + MER5A DNA MER1_type 1 189 0 2025 94 8 0 chr18 44765843 44766108 -41222826 + AluY SINE Alu 30 296 -15 550 309 11 6 chr18 44769206 44769381 -41219553 - MER5B DNA MER1_type -2 176 1 281 328 53 11 chr18 44769590 44769719 -41219215 + MIR SINE MIR 18 151 -65 659 166 195 137 chr18 44769756 44770063 -41218871 - MLT2B1 LTR ERVL -2 518 194 967 214 85 39 chr18 44771127 44771408 -41217526 - LTR19C LTR ERV1 0 779 486 * 1574 208 17 83 chr18 44771386 44771805 -41217129 - LTR9 LTR ERV1 -221 391 1 721 277 40 10 chr18 44773165 44773367 -41215567 + LTR35 LTR ERV1 411 618 0 336 328 73 39 chr18 44773387 44773591 -41215343 + MER57-int LTR ERV1 1068 1278 -6259 457 314 12 24 chr18 44774346 44774598 -41214336 + MER57-int LTR ERV1 1409 1657 -5019 927 305 56 35 chr18 44774879 44775596 -41213338 + MER57-int LTR ERV1 1986 2717 -3959 2341 346 45 34 chr18 44776368 44779338 -41209596 + MER57-int LTR ERV1 3389 6108 -1648 1955 178 90 3 chr18 44779930 44780285 -41208649 - MSTB LTR MaLR 0 426 41 745 189 0 8 chr18 44780302 44780434 -41208500 - FLAM_C SINE Alu -12 131 1 321 157 0 0 chr18 44780435 44780486 -41208448 - MSTB LTR MaLR -373 53 3 837 285 67 56 chr18 44780960 44781528 -41207406 + MER57-int LTR ERV1 6079 6652 -24 2276 69 0 4 chr18 44781531 44781808 -41207126 + AluY SINE Alu 1 276 -35 459 0 0 0 chr18 44781808 44781859 -41207075 + (TAAAA)n Simple_repeat Simple_repeat 5 55 0 1780 205 30 116 chr18 44781946 44782550 -41206384 - MLT2B3 LTR ERVL -2 552 1 227 163 116 0 chr18 44782692 44782735 -41206199 + LTR60 LTR ERV1 282 329 -257 778 261 39 15 chr18 44782810 44783013 -41205921 + LTR35 LTR ERV1 411 618 0 248 111 22 0 chr18 44783405 44783450 -41205484 + (CTATT)n Simple_repeat Simple_repeat 4 49 0 354 23 0 0 chr18 44784801 44784844 -41204090 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 201 74 0 0 chr18 44784843 44784870 -41204064 + (TG)n Simple_repeat Simple_repeat 2 28 0 * 218 257 43 29 chr18 44785035 44785105 -41203829 + L2 LINE L2 3182 3252 -61 23 92 0 0 chr18 44785119 44785184 -41203750 + AT_rich Low_complexity Low_complexity 1 65 0 455 235 11 24 chr18 44785861 44786158 -41202776 + GA-rich Low_complexity Low_complexity 1 293 0 217 184 20 0 chr18 44787656 44787705 -41201229 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 321 123 0 0 chr18 44789257 44789322 -41199612 + (TA)n Simple_repeat Simple_repeat 1 65 0 365 54 18 0 chr18 44789380 44789436 -41199498 + (TA)n Simple_repeat Simple_repeat 2 58 0 390 21 0 0 chr18 44789592 44789639 -41199295 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2030 125 0 0 chr18 44789641 44789922 -41199012 - AluSx SINE Alu -31 281 1 2413 191 55 4 chr18 44790779 44791271 -41197663 - LTR53 LTR ERVL -2 517 1 2155 187 18 50 chr18 44792766 44793268 -41195666 + MER66B LTR ERV1 1 486 0 24 0 0 0 chr18 44793507 44793531 -41195403 + AT_rich Low_complexity Low_complexity 1 24 0 467 248 200 14 chr18 44793747 44793892 -41195042 + MER5A DNA MER1_type 17 188 -1 22 0 0 0 chr18 44794573 44794595 -41194339 + AT_rich Low_complexity Low_complexity 1 22 0 1320 209 40 23 chr18 44794623 44794925 -41194009 - AluJb SINE Alu -5 307 1 334 277 164 39 chr18 44794991 44795222 -41193712 - MER112 DNA MER1_type 0 260 1 295 207 6 41 chr18 44795824 44795993 -41192941 + (TA)n Simple_repeat Simple_repeat 2 164 0 942 219 158 3 chr18 44795999 44796310 -41192624 + LTR37A LTR ERV1 15 373 -53 2559 111 3 13 chr18 44796386 44796765 -41192169 + THE1C LTR MaLR 1 375 0 2514 199 58 45 chr18 44796765 44797459 -41191475 - L1MA9 LINE L1 -41 6271 5569 1652 141 9 51 chr18 44797460 44797793 -41191141 + MER4D LTR ERV1 1 319 -553 429 36 0 0 chr18 44797797 44797852 -41191082 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 261 159 0 0 chr18 44797855 44797918 -41191016 + (TA)n Simple_repeat Simple_repeat 1 63 0 320 273 23 0 chr18 44797919 44798007 -41190927 + L1MC4 LINE L1 6614 6703 -1339 2590 155 25 88 chr18 44798033 44798626 -41190308 + MER4D LTR ERV1 314 869 -3 1331 144 27 120 chr18 44798629 44798962 -41189972 - L1MA9 LINE L1 -741 5571 5270 940 220 0 23 chr18 44798964 44799050 -41189884 + L1 LINE L1 5054 5140 -1006 1418 214 99 37 chr18 44799050 44799484 -41189450 + LOR1b LTR ERV1 1 461 0 940 220 0 23 chr18 44799484 44799615 -41189319 + L1 LINE L1 5140 5266 -880 249 121 0 91 chr18 44799617 44799683 -41189251 + LTR37A LTR ERV1 367 426 0 1705 126 119 0 chr18 44799745 44800023 -41188911 + AluSx SINE Alu 1 311 -1 1431 143 0 0 chr18 44800206 44800416 -41188518 - AluSx SINE Alu -94 218 9 273 125 0 0 chr18 44801711 44801751 -41187183 + tRNA-Met-e tRNA tRNA 1 40 -35 1454 192 42 0 chr18 44802140 44802433 -41186501 + AluJb SINE Alu 13 316 0 193 348 34 22 chr18 44802856 44802945 -41185989 + L2 LINE L2 3139 3228 -44 1225 205 12 105 chr18 44804213 44804623 -41184311 + MLT1A2 LTR MaLR 1 372 -2 1192 121 0 0 chr18 44804700 44804866 -41184068 + AluSg/x SINE Alu 128 293 -17 231 209 179 0 chr18 44805029 44805096 -41183838 + MIR3 SINE MIR 95 173 -35 1052 321 96 23 chr18 44805146 44805701 -41183233 + MLT1G1 LTR MaLR 1 595 0 255 280 70 56 chr18 44805788 44805931 -41183003 + L3 LINE CR1 1382 1526 -51 602 289 47 17 chr18 44806117 44806349 -41182585 - MIR SINE MIR -1 261 23 209 314 62 67 chr18 44807132 44807330 -41181604 + MIR SINE MIR 16 211 -51 304 323 116 6 chr18 44807598 44807762 -41181172 - MIR SINE MIR -15 247 66 1890 220 32 19 chr18 44807863 44808295 -41180639 + MER21B LTR ERV1 423 860 -3 225 267 27 13 chr18 44808307 44808382 -41180552 - MER58A DNA MER1_type -31 76 1 466 296 28 17 chr18 44809089 44809268 -41179666 + L1ME3A LINE L1 137 317 -5888 441 273 138 58 chr18 44809885 44811127 -41177807 + L1ME3A LINE L1 1392 2695 -3520 273 196 0 0 chr18 44811147 44811203 -41177731 + (TA)n Simple_repeat Simple_repeat 2 57 0 257 255 67 39 chr18 44811203 44811411 -41177523 + L1ME3A LINE L1 5335 5548 -691 1264 273 55 21 chr18 44811466 44811978 -41176956 + L1ME3A LINE L1 5703 6231 -8 962 286 75 27 chr18 44813303 44813674 -41175260 + MLT1I LTR MaLR 21 409 0 336 24 0 0 chr18 44814501 44814542 -41174392 + (TA)n Simple_repeat Simple_repeat 1 41 0 4558 45 0 0 chr18 44815029 44815580 -41173354 + L1PA5 LINE L1 5601 6151 -3 27 29 0 0 chr18 44815580 44815614 -41173320 + AT_rich Low_complexity Low_complexity 1 34 0 28 0 0 0 chr18 44815709 44815737 -41173197 + AT_rich Low_complexity Low_complexity 1 28 0 889 231 66 101 chr18 44816678 44817167 -41171767 - MER39 LTR ERV1 0 676 7 22 0 0 0 chr18 44817416 44817438 -41171496 + AT_rich Low_complexity Low_complexity 1 22 0 385 83 0 5 chr18 44817830 44817883 -41171051 - MLT2A1 LTR ERVL 0 453 410 339 85 0 0 chr18 44817883 44817930 -41171004 + (TG)n Simple_repeat Simple_repeat 2 48 0 180 0 0 0 chr18 44817956 44817976 -41170958 + (TA)n Simple_repeat Simple_repeat 2 21 0 389 57 0 0 chr18 44817979 44818032 -41170902 - HERVL LTR ERVL -29 5625 5573 807 66 0 0 chr18 44818032 44818138 -41170796 + (TA)n Simple_repeat Simple_repeat 1 106 0 2760 98 3 8 chr18 44818138 44818525 -41170409 - MLT2A1 LTR ERVL -59 385 1 26795 83 6 4 chr18 44818525 44824074 -41164860 - HERVL-A1 LTR ERVL 0 5654 1 314 121 0 52 chr18 44824074 44824112 -41164822 - MLT2A1 LTR ERVL 0 453 417 198 0 0 0 chr18 44824112 44824134 -41164800 + (TG)n Simple_repeat Simple_repeat 2 23 0 314 121 0 52 chr18 44824134 44824153 -41164781 - MLT2A1 LTR ERVL -36 417 399 246 189 0 19 chr18 44824154 44824207 -41164727 + (TA)n Simple_repeat Simple_repeat 2 53 0 243 0 0 0 chr18 44824210 44824237 -41164697 + (TG)n Simple_repeat Simple_repeat 2 28 0 2865 101 2 5 chr18 44824247 44824652 -41164282 - MLT2A1 LTR ERVL -40 404 1 544 299 93 20 chr18 44824804 44825105 -41163829 - MER5C DNA MER1_type -1 323 1 209 289 218 0 chr18 44826281 44826423 -41162511 + L2 LINE L2 2804 2976 -338 1799 161 33 10 chr18 44826459 44826763 -41162171 - AluSx SINE Alu -1 311 1 298 291 78 10 chr18 44826773 44826876 -41162058 + L2 LINE L2 3118 3227 -86 264 377 38 0 chr18 44826913 44827019 -41161915 - MIR3 SINE MIR -39 169 60 692 313 18 9 chr18 44827290 44827514 -41161420 + MIR SINE MIR 29 254 -8 2069 209 37 37 chr18 44827550 44828068 -41160866 + LTR53 LTR ERVL 1 518 -1 186 231 0 0 chr18 44828628 44828667 -41160267 + L2 LINE L2 3186 3224 -48 1604 192 0 53 chr18 44830102 44830425 -41158509 - AluJo SINE Alu -4 308 3 254 237 17 0 chr18 44830673 44830732 -41158202 + (TA)n Simple_repeat Simple_repeat 2 61 0 2190 71 43 0 chr18 44830768 44831048 -41157886 + AluYa5 SINE Alu 20 311 0 2956 237 121 19 chr18 44831146 44831463 -41157471 - L1ME1 LINE L1 -5 6161 5878 690 264 14 64 chr18 44831463 44831683 -41157251 + MER63A DNA MER1_type 1 209 -1 2956 237 121 19 chr18 44831683 44832518 -41156416 - L1ME1 LINE L1 -288 5878 4887 27 49 0 0 chr18 44833377 44833418 -41155516 + AT_rich Low_complexity Low_complexity 1 41 0 29 84 0 0 chr18 44833495 44833566 -41155368 + AT_rich Low_complexity Low_complexity 1 71 0 261 348 78 0 chr18 44835997 44836112 -41152822 + MIR3 SINE MIR 63 186 -22 21 0 0 0 chr18 44836301 44836322 -41152612 + AT_rich Low_complexity Low_complexity 1 21 0 345 385 19 12 chr18 44836877 44837038 -41151896 + MIR3 SINE MIR 26 187 -21 282 56 0 0 chr18 44837935 44837971 -41150963 + (CA)n Simple_repeat Simple_repeat 1 36 0 225 323 25 43 chr18 44838023 44838158 -41150776 - MIR SINE MIR -73 135 30 2490 200 28 2 chr18 44838498 44838964 -41149970 + MER66A LTR ERV1 1 478 0 27 0 0 0 chr18 44839047 44839074 -41149860 + AT_rich Low_complexity Low_complexity 1 27 0 234 0 0 0 chr18 44839175 44839201 -41149733 + (A)n Simple_repeat Simple_repeat 1 26 0 563 300 107 36 chr18 44839458 44839878 -41149056 + LTR16A LTR ERVL 1 450 0 214 250 0 0 chr18 44840249 44840293 -41148641 + CT-rich Low_complexity Low_complexity 2 45 0 2021 242 31 2 chr18 44840403 44840857 -41148077 + MER66A LTR ERV1 11 477 -1 28 61 0 0 chr18 44840919 44840968 -41147966 + AT_rich Low_complexity Low_complexity 1 49 0 243 0 0 0 chr18 44841070 44841097 -41147837 + (A)n Simple_repeat Simple_repeat 1 27 0 589 298 107 36 chr18 44841354 44841774 -41147160 + LTR16A LTR ERVL 1 450 0 288 222 0 0 chr18 44842165 44842237 -41146697 + CT-rich Low_complexity Low_complexity 1 72 0 548 207 15 0 chr18 44842276 44842411 -41146523 + CT-rich Low_complexity Low_complexity 3 139 0 279 273 26 0 chr18 44847383 44847460 -41141474 + MER39 LTR ERV1 4 82 -625 309 201 0 0 chr18 44847528 44847588 -41141346 + MER39 LTR ERV1 15 71 -641 910 231 72 81 chr18 44847720 44848066 -41140868 + MER39 LTR ERV1 340 682 -25 2304 65 0 14 chr18 44848271 44848564 -41140370 + AluY SINE Alu 1 289 -22 832 196 38 0 chr18 44848570 44848728 -41140206 + FRAM SINE Alu 1 164 -12 1504 218 0 25 chr18 44848875 44849196 -41139738 + MLT2C1 LTR ERVL 31 343 -54 180 330 55 22 chr18 44849493 44849584 -41139350 - MIR SINE MIR -48 214 121 450 349 127 9 chr18 44850133 44850362 -41138572 - MIR SINE MIR -2 260 5 459 266 32 16 chr18 44850491 44850615 -41138319 + L2 LINE L2 3184 3309 -4 876 263 36 25 chr18 44851043 44851385 -41137549 + L1MC4 LINE L1 6126 6242 0 2340 76 0 7 chr18 44851623 44851924 -41137010 + AluY SINE Alu 1 299 -12 340 333 23 16 chr18 44852078 44852207 -41136727 - MER5B DNA MER1_type -7 171 42 1375 201 74 34 chr18 44852207 44852586 -41136348 - LTR8A LTR ERV1 0 727 334 789 167 0 0 chr18 44852615 44852741 -41136193 - LTR8A LTR ERV1 -465 262 137 752 129 8 8 chr18 44852975 44853099 -41135835 - LTR8A LTR ERV1 -603 124 1 192 268 0 0 chr18 44853100 44853141 -41135793 - MER5B DNA MER1_type -135 43 3 958 106 14 0 chr18 44853626 44853767 -41135167 - MER41B LTR ERV1 -492 143 1 451 390 49 15 chr18 44853772 44854100 -41134834 + L2 LINE L2 111 449 -2865 1182 217 40 12 chr18 44854136 44854483 -41134451 - MER31B LTR ERV1 0 466 72 364 336 70 0 chr18 44854520 44854648 -41134286 - MIR SINE MIR -124 138 2 36 0 0 0 chr18 44855194 44855230 -41133704 + AT_rich Low_complexity Low_complexity 1 36 0 258 358 75 20 chr18 44856245 44856446 -41132488 + L2 LINE L2 2580 2791 -523 818 270 102 0 chr18 44856978 44857193 -41131741 - MER8 DNA MER2_type -2 237 1 1192 276 138 67 chr18 44857508 44858197 -41130737 - MER21B LTR ERV1 -125 738 1 32 67 0 0 chr18 44858558 44858618 -41130316 + AT_rich Low_complexity Low_complexity 1 60 0 22 0 0 0 chr18 44858906 44858928 -41130006 + AT_rich Low_complexity Low_complexity 1 22 0 6754 125 33 5 chr18 44858928 44860402 -41128532 - L1MA2 LINE L1 0 6304 4790 1631 116 87 25 chr18 44860736 44860886 -41128048 + L1PA10 LINE L1 5800 5939 -229 5767 118 148 31 chr18 44860886 44861992 -41126942 + MER11B LTR ERVK 1 1236 0 1631 116 87 25 chr18 44861992 44862116 -41126818 + L1PA10 LINE L1 5939 6091 -77 2607 175 23 6 chr18 44862118 44862618 -41126316 + LTR27 LTR ERV1 3 479 -22 451 101 0 91 chr18 44862618 44862717 -41126217 + L1PA8 LINE L1 6074 6163 -9 969 268 67 47 chr18 44862932 44863380 -41125554 - LTR16A1 LTR ERVL 0 457 1 228 192 19 0 chr18 44863809 44863861 -41125073 + (TA)n Simple_repeat Simple_repeat 2 54 0 284 324 0 48 chr18 44865394 44865499 -41123435 - L2 LINE L2 -27 3245 3146 302 327 18 26 chr18 44865600 44865713 -41123221 + MER20B DNA MER1_type 67 178 -605 253 391 42 21 chr18 44865969 44866207 -41122727 - L2 LINE L2 -373 2941 2699 988 233 35 10 chr18 44866408 44866721 -41122213 - MER33 DNA MER1_type -3 321 1 359 315 9 111 chr18 44867330 44867546 -41121388 - MIR SINE MIR -57 205 12 189 129 0 0 chr18 44867555 44867586 -41121348 + L2 LINE L2 3282 3312 -1 387 259 333 6 chr18 44868356 44868530 -41120404 + MIR SINE MIR 17 247 -15 1345 327 76 61 chr18 44868722 44870303 -41118631 + L1PA12 LINE L1 9 2181 -5400 750 270 58 19 chr18 44870528 44870787 -41118147 + L1PA12 LINE L1 2208 2476 -5105 7007 55 6 3 chr18 44870793 44871688 -41117246 + L1PA6 LINE L1 5254 6150 -4 207 0 0 0 chr18 44871788 44871811 -41117123 + (T)n Simple_repeat Simple_repeat 1 23 0 30 27 0 0 chr18 44871822 44871859 -41117075 + GC_rich Low_complexity Low_complexity 1 37 0 1895 94 4 4 chr18 44872087 44872353 -41116581 - AluY SINE Alu -5 306 41 2192 110 0 19 chr18 44872386 44872696 -41116238 + AluSc SINE Alu 1 304 -5 4037 140 18 11 chr18 44872697 44873412 -41115522 + L1PA16 LINE L1 5370 6124 -42 1020 98 0 0 chr18 44874137 44874280 -41114654 - AluSp/q SINE Alu -1 312 170 1238 148 4 55 chr18 44874401 44874638 -41114296 - L1PA16 LINE L1 -1 6165 5941 307 336 35 0 chr18 44875475 44875591 -41113343 + MIR3 SINE MIR 60 179 -29 194 306 0 14 chr18 44875575 44875647 -41113287 + L2 LINE L2 989 1059 -2255 * 509 304 70 0 chr18 44875688 44875902 -41113032 - L1MC4 LINE L1 -627 7415 7187 * 948 266 120 6 chr18 44875875 44876264 -41112670 - L1MC4 LINE L1 -850 7145 6688 23 0 0 0 chr18 44877010 44877033 -41111901 + AT_rich Low_complexity Low_complexity 1 23 0 1976 203 54 2 chr18 44878654 44879059 -41109875 + MSTB LTR MaLR 1 426 0 1653 167 57 48 chr18 44879148 44879520 -41109414 - THE1C LTR MaLR 0 375 1 2178 205 114 6 chr18 44880482 44880989 -41107945 - L1M3c LINE L1 -4904 1237 676 342 218 0 0 chr18 44881017 44881127 -41107807 + (TA)n Simple_repeat Simple_repeat 2 111 0 43 20 0 0 chr18 44882115 44882165 -41106769 + AT_rich Low_complexity Low_complexity 1 50 0 25 31 0 0 chr18 44882311 44882343 -41106591 + AT_rich Low_complexity Low_complexity 1 32 0 2507 212 71 15 chr18 44882560 44883178 -41105756 + MER39B LTR ERV1 1 653 0 504 330 65 33 chr18 44883373 44883831 -41105103 - L1ME LINE L1 -435 5729 5257 32 43 0 0 chr18 44884360 44884406 -41104528 + AT_rich Low_complexity Low_complexity 1 46 0 216 281 58 101 chr18 44885175 44885314 -41103620 + L2 LINE L2 2343 2475 -839 354 311 136 21 chr18 44885418 44885800 -41103134 - L1ME LINE L1 -1214 4932 4507 1708 191 153 5 chr18 44885938 44886310 -41102624 - MSTA LTR MaLR -1 427 1 8691 189 22 2 chr18 44886310 44887929 -41101005 - MSTA-int LTR MaLR 0 1651 1 1852 148 151 5 chr18 44887931 44888303 -41100631 - MSTA LTR MaLR -2 426 1 391 287 87 9 chr18 44888564 44888679 -41100255 + L2 LINE L2 3148 3271 -1 278 115 19 0 chr18 44888735 44888787 -41100147 + GA-rich Low_complexity Low_complexity 1 53 0 1042 264 69 54 chr18 44890060 44890507 -41098427 - MLT1C LTR MaLR -6 461 8 180 383 72 6 chr18 44891198 44891378 -41097556 + L3 LINE CR1 184 375 -1202 214 145 29 43 chr18 44891699 44891768 -41097166 + T-rich Low_complexity Low_complexity 4 71 0 234 346 59 30 chr18 44892227 44892328 -41096606 + L3 LINE CR1 1465 1568 -9 22 80 0 0 chr18 44892406 44892456 -41096478 + AT_rich Low_complexity Low_complexity 1 50 0 849 208 25 0 chr18 44892575 44892772 -41096162 - L1MD2 LINE L1 0 6359 6158 977 149 31 41 chr18 44893196 44893390 -41095544 - MER89 LTR ERV1 0 559 368 23 54 0 0 chr18 44894608 44894645 -41094289 + AT_rich Low_complexity Low_complexity 1 37 0 198 0 0 0 chr18 44894775 44894797 -41094137 + (CA)n Simple_repeat Simple_repeat 2 23 0 225 340 113 0 chr18 44895527 44895624 -41093310 - L2 LINE L2 -16 3297 3190 382 332 72 72 chr18 44895835 44896470 -41092464 + L1MEd LINE L1 122 756 -5363 315 0 0 0 chr18 44896470 44896505 -41092429 + (CA)n Simple_repeat Simple_repeat 1 35 0 382 332 72 72 chr18 44896505 44896601 -41092333 + L1MEd LINE L1 756 851 -5268 6094 95 18 0 chr18 44896601 44897585 -41091349 + L1PA10 LINE L1 5151 6153 -15 382 332 72 72 chr18 44897585 44897984 -41090950 + L1MEd LINE L1 850 1253 -4866 209 182 18 0 chr18 44899136 44899191 -41089743 + T-rich Low_complexity Low_complexity 4 59 0 243 0 0 0 chr18 44899664 44899691 -41089243 + (CA)n Simple_repeat Simple_repeat 2 28 0 1811 135 11 0 chr18 44899697 44899971 -41088963 - MER49 LTR ERV1 -19 904 628 1487 196 41 56 chr18 44899974 44900315 -41088619 + LTR32 LTR ERVL 15 350 -121 938 172 0 6 chr18 44900316 44900473 -41088461 + LTR32 LTR ERVL 316 471 0 * 3181 142 58 48 chr18 44900473 44901096 -41087838 - MER49 LTR ERV1 -294 629 1 255 394 8 0 chr18 44901884 44902016 -41086918 - L2 LINE L2 -12 3301 3169 201 293 0 35 chr18 44902350 44902408 -41086526 - L2 LINE L2 -534 2780 2725 1100 212 35 54 chr18 44902465 44902724 -41086210 + LTR32 LTR ERVL 80 333 -138 1262 132 59 0 chr18 44902913 44903132 -41085802 - L1PA10 LINE L1 -3 6165 5934 419 234 106 86 chr18 44903172 44903387 -41085547 + LTR18B LTR ERVL 1 194 -166 * 578 179 0 8 chr18 44903377 44903494 -41085440 + LTR18B LTR ERVL 486 601 -13 2586 222 14 22 chr18 44903504 44904153 -41084781 + HERVL18 LTR ERVL 4 715 -5332 2507 150 5 0 chr18 44904153 44904532 -41084402 + HERVL18 LTR ERVL 5294 5674 -373 252 330 93 57 chr18 44905062 44905501 -41083433 + L2 LINE L2 2198 2652 -662 979 191 6 0 chr18 44906078 44906240 -41082694 + LTR18B LTR ERVL 14 176 -438 303 146 0 0 chr18 44906277 44906325 -41082609 + LTR18B LTR ERVL 560 607 -7 1708 196 0 4 chr18 44906327 44906608 -41082326 + HERVL18 LTR ERVL 2 281 -5766 1760 223 3 0 chr18 44906615 44906943 -41081991 + HERVL18 LTR ERVL 633 961 -5086 1646 160 12 26 chr18 44906930 44907274 -41081660 + HERVL18 LTR ERVL 1383 1810 -4237 * 1275 129 64 2 chr18 44907273 44907533 -41081401 + HERVL18 LTR ERVL 2119 2452 -3595 * 2293 184 6 3 chr18 44907532 44907896 -41081038 + HERVL18 LTR ERVL 2720 3084 -2963 1287 213 159 48 chr18 44907897 44908418 -41080516 + LTR18B LTR ERVL 36 614 0 250 304 108 16 chr18 44909450 44910006 -41078928 + L1ME1 LINE L1 2900 3506 -2640 1169 229 49 0 chr18 44910404 44910517 -41078417 + AluJb SINE Alu 1 107 -205 183 42 0 0 chr18 44910517 44910541 -41078393 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1169 229 49 0 chr18 44910541 44910693 -41078241 + AluJb SINE Alu 107 279 -33 229 280 0 0 chr18 44911495 44911545 -41077389 - L2 LINE L2 -12 3301 3252 508 232 14 0 chr18 44911759 44911897 -41077037 - L1MD3 LINE L1 -8 7987 7848 706 249 78 70 chr18 44911944 44912429 -41076505 + L1ME1 LINE L1 3996 4484 -1662 2131 237 63 64 chr18 44912513 44912625 -41076309 + L1ME1 LINE L1 5312 5423 -743 221 0 0 33 chr18 44912625 44912655 -41076279 + (TTAA)n Simple_repeat Simple_repeat 1 29 0 2131 237 63 64 chr18 44912655 44913397 -41075537 + L1ME1 LINE L1 5423 6165 -1 2226 107 7 0 chr18 44913400 44913709 -41075225 + AluY SINE Alu 1 311 0 295 322 67 11 chr18 44913926 44914016 -41074918 + L2 LINE L2 3191 3285 -28 259 415 23 6 chr18 44914324 44914500 -41074434 + L2 LINE L2 2665 2843 -471 664 252 126 48 chr18 44915188 44915497 -41073437 + MLT1C LTR MaLR 37 369 -98 * 761 162 37 0 chr18 44915494 44915630 -41073304 + MLT2A1 LTR ERVL 256 396 -48 21 0 0 0 chr18 44915631 44915652 -41073282 + AT_rich Low_complexity Low_complexity 1 21 0 276 83 146 0 chr18 44915667 44915715 -41073219 + MLT2A1 LTR ERVL 390 444 0 42180 93 5 2 chr18 44915717 44921348 -41067586 + HERVL-A1-A1 LTR ERVL 4 5654 0 2996 87 30 18 chr18 44921348 44921732 -41067202 + MLT2A1 LTR ERVL 1 392 -52 351 113 0 0 chr18 44921732 44921785 -41067149 + (TG)n Simple_repeat Simple_repeat 2 54 0 2996 87 30 18 chr18 44921785 44921839 -41067095 + MLT2A1 LTR ERVL 392 444 0 295 294 20 10 chr18 44922765 44922867 -41066067 + MIR SINE MIR 157 259 -3 383 265 138 51 chr18 44922910 44923106 -41065828 + MIR SINE MIR 5 217 -45 27 0 0 0 chr18 44923812 44923839 -41065095 + AT_rich Low_complexity Low_complexity 1 27 0 569 93 0 0 chr18 44924102 44924188 -41064746 + AluY SINE Alu 2 87 -224 10498 223 30 39 chr18 44925214 44929475 -41059459 - L1PA16 LINE L1 -9 7595 3288 1896 172 3 83 chr18 44929476 44929860 -41059074 - LTR10B LTR ERV1 0 547 195 10962 270 27 34 chr18 44929920 44933624 -41055310 - LTR10B-int LTR ERV1 -1 7784 3071 4606 277 18 8 chr18 44933600 44935044 -41053890 - LTR10B-int LTR ERV1 -3673 4112 988 * 260 295 0 0 chr18 44935052 44935113 -41053821 + LTR10B LTR ERV1 487 547 0 2431 217 45 37 chr18 44935232 44936168 -41052766 - LTR10B-int LTR ERV1 -5812 837 5 986 209 15 10 chr18 44936168 44936364 -41052570 - LTR10B LTR ERV1 0 547 351 734 110 0 25 chr18 44936364 44936482 -41052452 + L1PA5 LINE L1 6024 6138 -16 902 243 59 53 chr18 44936500 44936987 -41051947 - L1PA16 LINE L1 -4878 2696 2234 419 338 13 13 chr18 44937018 44937172 -41051762 - L1PA16 LINE L1 -6633 941 788 183 80 0 0 chr18 44937250 44937275 -41051659 + (TAA)n Simple_repeat Simple_repeat 2 26 0 24 0 0 0 chr18 44937959 44937983 -41050951 + AT_rich Low_complexity Low_complexity 1 24 0 580 233 41 20 chr18 44938564 44938710 -41050224 + MER5B DNA MER1_type 24 172 -6 329 291 66 71 chr18 44939851 44939908 -41049026 + MIR SINE MIR 68 124 -138 1642 169 49 33 chr18 44939908 44940275 -41048659 + THE1C LTR MaLR 1 373 -2 329 291 66 71 chr18 44940275 44940413 -41048521 + MIR SINE MIR 124 262 0 236 260 130 16 chr18 44940471 44940594 -41048340 + MIR SINE MIR 126 262 0 929 158 21 47 chr18 44941119 44941309 -41047625 + MER65B LTR ERV1 1 185 -346 465 90 0 39 chr18 44941322 44941400 -41047534 + MER65A LTR ERV1 371 445 0 363 235 20 31 chr18 44941836 44941934 -41047000 - L1ME LINE L1 -460 5661 5565 23 0 0 0 chr18 44941935 44941958 -41046976 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr18 44942427 44942457 -41046477 + AT_rich Low_complexity Low_complexity 1 30 0 351 0 0 0 chr18 44942639 44942678 -41046256 + (CATA)n Simple_repeat Simple_repeat 3 41 0 2328 68 7 3 chr18 44943005 44943301 -41045633 + AluY SINE Alu 1 297 -14 1897 148 42 22 chr18 44943421 44943780 -41045154 + MER47A DNA MER2_type 1 366 0 2162 189 46 22 chr18 44944280 44944736 -41044198 - MLT1C LTR MaLR 0 467 1 496 180 82 2 chr18 44945108 44945234 -41043700 + L1MB7 LINE L1 6037 6162 -2 2310 212 45 20 chr18 44945284 44945821 -41043113 - MER44D DNA MER2_type 0 605 1 208 270 79 11 chr18 44946050 44946139 -41042795 + L2 LINE L2 3174 3268 -4 1371 138 41 4 chr18 44947259 44947527 -41041407 + L1MA8 LINE L1 6011 6288 -3 26 74 0 0 chr18 44948416 44948470 -41040464 + AT_rich Low_complexity Low_complexity 1 54 0 1978 100 3 50 chr18 44948842 44949171 -41039763 + AluSq SINE Alu 1 315 0 2121 105 10 3 chr18 44949780 44950086 -41038848 - AluSc SINE Alu -1 308 1 25 0 0 0 chr18 44950387 44950412 -41038522 + AT_rich Low_complexity Low_complexity 1 25 0 392 345 45 80 chr18 44950652 44951075 -41037859 + L3 LINE CR1 1091 1498 -79 203 345 0 0 chr18 44953028 44953086 -41035848 - MER5A DNA MER1_type -4 185 128 464 147 0 0 chr18 44953165 44953233 -41035701 - AluS SINE Alu -243 70 3 23 78 0 0 chr18 44953289 44953340 -41035594 + AT_rich Low_complexity Low_complexity 1 51 0 524 226 0 24 chr18 44953589 44953713 -41035221 + FLAM_A SINE Alu 11 131 -11 385 330 88 36 chr18 44953800 44954106 -41034828 + L1MC/D LINE L1 5477 5798 -2010 180 0 0 0 chr18 44955240 44955260 -41033674 + (A)n Simple_repeat Simple_repeat 1 20 0 409 329 62 26 chr18 44955819 44956199 -41032735 - MLT1J LTR MaLR -25 486 47 605 230 60 25 chr18 44956415 44956615 -41032319 - HsTC2 DNA Tc2 -1524 374 168 963 128 0 0 chr18 44956648 44956781 -41032153 + AluSg SINE Alu 1 133 -177 1923 112 21 11 chr18 44956781 44957066 -41031868 - THE1C LTR MaLR -87 288 1 260 313 25 6 chr18 44957071 44957234 -41031700 + (TG)n Simple_repeat Simple_repeat 1 166 0 1651 239 71 7 chr18 44958111 44958534 -41030400 + MLT1D LTR MaLR 5 454 -51 2297 83 29 0 chr18 44959213 44959525 -41029409 - L1PA7 LINE L1 -13 6141 5821 23 0 0 0 chr18 44959525 44959548 -41029386 + AT_rich Low_complexity Low_complexity 1 23 0 360 329 45 0 chr18 44959905 44960060 -41028874 - MIR3 SINE MIR -5 203 42 1707 219 52 41 chr18 44962160 44962271 -41026663 + MLT1C LTR MaLR 2 110 -357 3916 155 26 46 chr18 44962271 44963072 -41025862 - LTR1 LTR ERV1 0 785 1 1707 219 52 41 chr18 44963072 44963421 -41025513 + MLT1C LTR MaLR 110 467 0 22 0 0 0 chr18 44964226 44964248 -41024686 + AT_rich Low_complexity Low_complexity 1 22 0 8794 29 1 0 chr18 44965472 44966535 -41022399 - L1PA3 LINE L1 -839 5307 4244 7233 36 0 0 chr18 44966535 44967396 -41021538 + L1PA3 LINE L1 5291 6155 0 414 216 0 9 chr18 44967615 44967726 -41021208 + L1MA4 LINE L1 6179 6288 -12 187 354 35 14 chr18 44968325 44968469 -41020465 - MIR SINE MIR -6 256 110 442 319 0 22 chr18 44969334 44969516 -41019418 + GA-rich Low_complexity Low_complexity 2 179 0 2017 153 48 17 chr18 44969701 44970054 -41018880 - THE1B LTR MaLR 0 364 1 10900 123 8 1 chr18 44970054 44971624 -41017310 - THE1B-int LTR MaLR 0 1580 1 2049 138 51 23 chr18 44971624 44971978 -41016956 - THE1B LTR MaLR 0 364 1 2497 129 3 0 chr18 44972348 44972711 -41016223 - THE1B LTR MaLR 0 364 1 180 0 0 0 chr18 44973285 44973305 -41015629 + (TG)n Simple_repeat Simple_repeat 2 21 0 29 78 0 0 chr18 44973885 44973949 -41014985 + AT_rich Low_complexity Low_complexity 1 64 0 16243 211 24 14 chr18 44973966 44979173 -41009761 - L1PA15 LINE L1 -13 7590 2319 645 270 22 89 chr18 44980473 44980817 -41008117 - L1PA15 LINE L1 -7188 393 80 1573 170 55 24 chr18 44980817 44981106 -41007828 - AluSg SINE Alu -12 298 1 645 270 22 89 chr18 44981106 44981176 -41007758 - L1PA15 LINE L1 -7501 80 7 252 269 43 21 chr18 44981238 44981331 -41007603 - MIR SINE MIR -74 134 40 239 288 0 0 chr18 44981651 44981724 -41007210 - MLT1J LTR MaLR -8 503 431 278 271 24 12 chr18 44981955 44982040 -41006894 + GA-rich Low_complexity Low_complexity 3 88 0 27 29 0 0 chr18 44982427 44982461 -41006473 + AT_rich Low_complexity Low_complexity 1 34 0 368 278 153 0 chr18 44984388 44984532 -41004402 - MIR SINE MIR 0 262 97 2492 255 126 64 chr18 44985014 44986373 -41002561 + L1MC4 LINE L1 6461 7903 -139 1546 208 55 3 chr18 44986500 44986812 -41002122 + Tigger7 DNA MER2_type 1 328 -405 184 247 67 67 chr18 44986948 44987037 -41001897 - MIR SINE MIR -74 188 100 2026 154 19 35 chr18 44988234 44988604 -41000330 - THE1B LTR MaLR 0 364 1 366 226 165 9 chr18 44989019 44989134 -40999800 + MIR SINE MIR 2 134 -128 186 344 61 68 chr18 44989490 44989653 -40999281 + MIR3 SINE MIR 30 191 -17 276 98 0 59 chr18 44990305 44990356 -40998578 + MADE1 DNA Mariner 33 80 0 835 254 14 5 chr18 44991698 44991915 -40997019 - MIR SINE MIR -26 236 18 21 0 0 0 chr18 44991994 44992015 -40996919 + AT_rich Low_complexity Low_complexity 1 21 0 934 344 99 36 chr18 44993387 44994766 -40994168 + L2 LINE L2 1841 3313 0 642 264 81 36 chr18 44995318 44995625 -40993309 - MLT1K LTR MaLR -6 582 262 558 191 54 18 chr18 44995625 44995793 -40993141 + L1MA8 LINE L1 6086 6259 -32 990 284 92 32 chr18 44997519 44997955 -40990979 + LTR16B LTR ERVL 3 464 0 488 210 80 12 chr18 44998190 44998352 -40990582 + MER104 DNA Tc2 2 174 -6 653 253 197 11 chr18 44999021 44999290 -40989644 + LTR50 LTR ERVL 1 319 -476 447 276 63 23 chr18 44999343 44999517 -40989417 - MER63A DNA MER1_type -3 207 27 335 225 139 8 chr18 44999533 44999662 -40989272 + LTR50 LTR ERVL 647 792 -3 223 298 144 0 chr18 44999671 44999775 -40989159 + MIR SINE MIR 124 242 -20 925 200 40 5 chr18 44999872 45000072 -40988862 + MER20 DNA MER1_type 10 216 -3 195 42 0 0 chr18 45000131 45000155 -40988779 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1403 206 4 22 chr18 45000163 45000439 -40988495 - AluJo SINE Alu -41 271 1 21 0 0 0 chr18 45000439 45000460 -40988474 + AT_rich Low_complexity Low_complexity 1 21 0 209 29 0 57 chr18 45000514 45000549 -40988385 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 36 40 0 0 chr18 45001280 45001330 -40987604 + AT_rich Low_complexity Low_complexity 1 50 0 194 204 19 56 chr18 45001833 45001887 -40987047 - MIR SINE MIR -131 131 80 444 313 126 41 chr18 45001996 45002290 -40986644 - MLT1J LTR MaLR -45 466 148 1029 227 9 31 chr18 45002355 45002584 -40986350 - MER58A DNA MER1_type 0 224 1 1469 257 40 32 chr18 45002841 45003366 -40985568 + L1ME1 LINE L1 5633 6161 -5 195 42 0 0 chr18 45005912 45005936 -40982998 + (GA)n Simple_repeat Simple_repeat 1 24 0 297 261 26 98 chr18 45006015 45006168 -40982766 + MLT1K LTR MaLR 413 554 -34 1498 210 25 50 chr18 45006194 45006556 -40982378 - MLT1A1 LTR MaLR -12 353 1 2554 26 7 10 chr18 45007086 45007389 -40981545 + AluYb8 SINE Alu 9 310 -8 300 268 19 32 chr18 45007671 45007828 -40981106 + CT-rich Low_complexity Low_complexity 1 155 0 23 0 0 0 chr18 45007834 45007857 -40981077 + AT_rich Low_complexity Low_complexity 1 23 0 192 300 0 17 chr18 45008439 45008499 -40980435 - MIR SINE MIR -129 79 21 4005 201 65 19 chr18 45009151 45010717 -40978217 - MER52A LTR ERV1 0 1755 57 3343 116 10 17 chr18 45011633 45012151 -40976783 + MER75 DNA T2_type 1 514 0 21 57 0 0 chr18 45013184 45013219 -40975715 + AT_rich Low_complexity Low_complexity 1 35 0 473 363 34 47 chr18 45013534 45013914 -40975020 + L3 LINE CR1 1040 1414 -163 1687 167 12 99 chr18 45014916 45015342 -40973592 - MLT1B LTR MaLR 0 390 2 281 295 43 50 chr18 45015435 45015574 -40973360 - MIR3 SINE MIR -16 192 55 2355 54 0 0 chr18 45015699 45016003 -40972931 - AluY SINE Alu 0 304 1 321 323 99 37 chr18 45016418 45016579 -40972355 + L2 LINE L2 3102 3272 0 1715 140 0 87 chr18 45017256 45017577 -40971357 - MER4A LTR ERV1 0 664 372 514 133 89 0 chr18 45017628 45017718 -40971216 - MER4A LTR ERV1 -566 98 1 355 340 14 7 chr18 45018021 45018162 -40970772 + L1MEc LINE L1 109 250 -6146 * 1903 259 64 70 chr18 45018161 45018581 -40970353 + L1MEc LINE L1 1133 1554 -4661 2203 124 40 84 chr18 45018581 45018912 -40970022 + MER57B LTR ERV1 3 310 -124 2246 43 54 0 chr18 45018912 45019189 -40969745 - AluY SINE Alu -9 302 11 2203 124 40 84 chr18 45019189 45019309 -40969625 + MER57B LTR ERV1 310 434 0 1903 259 64 70 chr18 45019309 45021311 -40967623 + L1MEc LINE L1 1554 3419 -2796 2256 147 33 12 chr18 45021311 45021739 -40967195 - Tigger4(Zombi) DNA MER2_type 0 2731 2295 483 207 0 0 chr18 45021736 45021823 -40967111 - Tigger4(Zombi) DNA MER2_type -2644 87 1 * 3579 249 64 67 chr18 45021901 45022015 -40966919 + L1MEc LINE L1 3488 3601 -2614 723 38 0 28 chr18 45022015 45022121 -40966813 + (GGAA)n Simple_repeat Simple_repeat 4 106 0 3579 249 64 67 chr18 45022121 45023919 -40965015 + L1MEc LINE L1 3601 5394 -821 * 11013 217 29 17 chr18 45023915 45023952 -40964982 - L1PA13 LINE L1 -2241 4556 4521 889 117 172 6 chr18 45023952 45024115 -40964819 - MER30B DNA MER1_type 0 190 1 11013 217 29 17 chr18 45024115 45027529 -40961405 - L1PA13 LINE L1 -2276 4521 1043 431 237 73 50 chr18 45027529 45027752 -40961182 + L1ME2 LINE L1 5193 5407 -743 933 250 226 29 chr18 45027752 45028172 -40960762 + MLT1D LTR MaLR 3 505 0 487 242 66 16 chr18 45028172 45028354 -40960580 + L1ME2 LINE L1 5407 5597 -567 412 196 28 119 chr18 45028372 45028515 -40960419 + L1ME2 LINE L1 6034 6166 0 567 258 126 0 chr18 45028549 45028739 -40960195 + L1ME2 LINE L1 5942 6155 -9 26 0 0 0 chr18 45028739 45028765 -40960169 + AT_rich Low_complexity Low_complexity 1 26 0 25 0 0 0 chr18 45028787 45028812 -40960122 + AT_rich Low_complexity Low_complexity 1 25 0 1006 216 0 0 chr18 45028935 45029129 -40959805 - L1PB4 LINE L1 -24 6132 5939 314 337 66 12 chr18 45029686 45029852 -40959082 + MIR SINE MIR 71 245 -17 287 300 69 126 chr18 45030187 45030418 -40958516 + L2 LINE L2 2155 2398 -916 255 31 0 0 chr18 45030418 45030450 -40958484 + (TG)n Simple_repeat Simple_repeat 2 33 0 287 300 69 126 chr18 45030450 45030959 -40957975 + L2 LINE L2 2398 2853 -461 25 51 0 0 chr18 45031468 45031507 -40957427 + AT_rich Low_complexity Low_complexity 1 39 0 6590 80 5 0 chr18 45032672 45033989 -40954945 - L1PA8 LINE L1 -2 6170 4837 306 309 99 40 chr18 45033994 45034195 -40954739 + L1MEc LINE L1 1614 1826 -4570 860 24 62 10 chr18 45034365 45034576 -40954358 + (TA)n Simple_repeat Simple_repeat 1 222 0 345 221 190 13 chr18 45034583 45034741 -40954193 + L1MEc LINE L1 2102 2287 -4109 298 338 35 0 chr18 45034746 45034977 -40953957 + L1MEc LINE L1 3361 3599 -2616 306 328 72 8 chr18 45035020 45035145 -40953789 + L1MEc LINE L1 4265 4397 -1818 1807 277 77 30 chr18 45035147 45036420 -40952514 + L1MEc LINE L1 4886 6215 -24 8671 40 0 1 chr18 45036649 45037714 -40951220 - L1P LINE L1 -1228 4918 3855 6932 53 16 1 chr18 45037714 45038778 -40950156 + L1PA5 LINE L1 5069 6148 -6 414 57 0 0 chr18 45038778 45038831 -40950103 + (TA)n Simple_repeat Simple_repeat 2 54 0 28 0 0 0 chr18 45039457 45039485 -40949449 + AT_rich Low_complexity Low_complexity 1 28 0 214 250 0 40 chr18 45039701 45039777 -40949157 + (CATA)n Simple_repeat Simple_repeat 4 76 0 * 362 225 17 28 chr18 45039724 45039896 -40949038 + (TA)n Simple_repeat Simple_repeat 2 172 0 243 0 0 0 chr18 45039896 45039923 -40949011 + (CA)n Simple_repeat Simple_repeat 2 28 0 2234 94 0 3 chr18 45040508 45040816 -40948118 - AluSq SINE Alu -6 307 1 27 49 0 0 chr18 45041702 45041743 -40947191 + AT_rich Low_complexity Low_complexity 1 41 0 26 64 0 0 chr18 45041792 45041839 -40947095 + AT_rich Low_complexity Low_complexity 1 47 0 410 231 66 25 chr18 45042969 45043090 -40945844 - MIR SINE MIR -70 192 67 191 35 0 35 chr18 45043675 45043704 -40945230 + (TTA)n Simple_repeat Simple_repeat 3 30 0 228 219 18 44 chr18 45044434 45044524 -40944410 + (TAAA)n Simple_repeat Simple_repeat 4 92 -22 1580 204 7 0 chr18 45044524 45044803 -40944131 + AluJb SINE Alu 1 281 -31 228 219 18 44 chr18 45044803 45044826 -40944108 + (TAAA)n Simple_repeat Simple_repeat 92 114 0 317 215 37 15 chr18 45044838 45044973 -40943961 + (TTATA)n Simple_repeat Simple_repeat 2 139 0 183 283 19 19 chr18 45045853 45045906 -40943028 - MIR SINE MIR -135 73 21 236 358 60 15 chr18 45047183 45047317 -40941617 - MIR3 SINE MIR -2 206 67 248 295 18 54 chr18 45047525 45047637 -40941297 + MIR SINE MIR 42 149 -59 443 208 135 124 chr18 45047660 45047728 -40941206 + MER5A DNA MER1_type 10 76 -113 2558 58 0 0 chr18 45047728 45048039 -40940895 + AluY SINE Alu 1 311 0 443 208 135 124 chr18 45048039 45048148 -40940786 + MER5A DNA MER1_type 76 189 0 226 257 46 73 chr18 45049249 45049358 -40939576 - MER117 DNA MER1_type -37 160 55 24 53 0 0 chr18 45049593 45049631 -40939303 + AT_rich Low_complexity Low_complexity 1 38 0 2557 199 71 15 chr18 45049729 45050323 -40938611 + L1MB8 LINE L1 5551 6177 -1 183 129 0 0 chr18 45050588 45050619 -40938315 + (TC)n Simple_repeat Simple_repeat 2 32 0 198 286 67 94 chr18 45051229 45051484 -40937450 - L2 LINE L2 -914 2400 2153 354 242 0 63 chr18 45051525 45051620 -40937314 + L1MC4 LINE L1 6615 6703 -1339 231 217 0 22 chr18 45051624 45051716 -40937218 + L1MC4 LINE L1 6614 6703 -1339 213 178 0 0 chr18 45051718 45051763 -40937171 + (TA)n Simple_repeat Simple_repeat 1 45 0 184 396 39 22 chr18 45051844 45052074 -40936860 - L2 LINE L2 -1975 1339 1106 1211 184 80 28 chr18 45053024 45053350 -40935584 + LTR37A LTR ERV1 84 426 0 360 326 14 22 chr18 45053648 45053786 -40935148 + MLT1J LTR MaLR 59 195 -316 283 225 60 66 chr18 45053879 45054030 -40934904 + MLT1J2 LTR MaLR 258 558 -57 1514 176 37 11 chr18 45054436 45054709 -40934225 + AluJo SINE Alu 1 280 -32 22 0 0 0 chr18 45055095 45055117 -40933817 + AT_rich Low_complexity Low_complexity 1 22 0 1205 161 97 19 chr18 45057058 45057368 -40931566 + LTR37A LTR ERV1 93 426 0 540 215 0 101 chr18 45057380 45057529 -40931405 + MER58B DNA MER1_type 204 337 -4 14718 135 20 12 chr18 45058142 45060538 -40928396 - Tigger1 DNA MER2_type -2 2416 1 389 309 130 8 chr18 45061028 45061151 -40927783 - L2 LINE L2 -1 3271 3134 2283 226 31 12 chr18 45061379 45061887 -40927047 + MLT2B1 LTR ERVL 1 518 -2 428 316 38 0 chr18 45062220 45062353 -40926581 - MIR SINE MIR -117 145 8 333 0 0 0 chr18 45062426 45062463 -40926471 + (CA)n Simple_repeat Simple_repeat 1 37 0 302 302 75 0 chr18 45062825 45062931 -40926003 + MIR SINE MIR 72 185 -77 1896 189 16 12 chr18 45064171 45064609 -40924325 + L1MB8 LINE L1 5214 5650 -534 12428 40 3 0 chr18 45064795 45067140 -40921794 + L1PA5 LINE L1 3794 6152 -2 1851 220 27 19 chr18 45067147 45067625 -40921309 + L1MB8 LINE L1 5663 6144 -34 457 211 23 39 chr18 45067686 45067814 -40921120 - MER39 LTR ERV1 0 707 582 1306 131 52 34 chr18 45067952 45067974 -40920960 + L1MA8 LINE L1 6016 6036 -255 1550 112 157 0 chr18 45067974 45068223 -40920711 + AluSg SINE Alu 1 288 -12 1306 131 52 34 chr18 45068223 45068467 -40920467 + L1MA8 LINE L1 6036 6287 -4 493 201 5 144 chr18 45068639 45068833 -40920101 - MER39 LTR ERV1 -114 593 427 300 272 87 0 chr18 45068838 45068930 -40920004 + L2 LINE L2 3214 3313 0 234 0 0 0 chr18 45069285 45069311 -40919623 + (TG)n Simple_repeat Simple_repeat 2 27 0 1170 222 89 32 chr18 45070557 45071113 -40917821 - LTR29 LTR ERV1 -2 729 22 1010 171 4 81 chr18 45071112 45071346 -40917588 - MLT1B LTR MaLR -173 217 2 * 2844 166 18 0 chr18 45071823 45072276 -40916658 - LTR24 LTR ERV1 0 467 7 584 198 9 0 chr18 45072301 45072417 -40916517 - LTR24-int LTR ERV1 0 5123 5007 2133 115 47 47 chr18 45072467 45072831 -40916103 - THE1B LTR MaLR 0 364 1 1802 123 43 84 chr18 45073128 45073519 -40915415 - THE1C LTR MaLR 0 375 1 665 331 37 11 chr18 45073568 45073840 -40915094 - LTR24-int LTR ERV1 -437 6685 6407 5958 106 13 8 chr18 45074385 45076124 -40912810 + L1PA8 LINE L1 4388 6159 -13 263 160 0 0 chr18 45076176 45076226 -40912708 - MLT2A2 LTR ERVL 0 444 395 2988 100 12 2 chr18 45076270 45076679 -40912255 - MLT2A2 LTR ERVL -40 413 1 499 342 60 43 chr18 45078384 45078929 -40910005 - LTR24-int LTR ERV1 -2836 4920 3374 276 275 54 54 chr18 45079047 45079214 -40909720 - LTR24-int LTR ERV1 -4402 4024 3858 1410 218 88 97 chr18 45079831 45080390 -40908544 - MLT2B3 LTR ERVL 0 554 1 27 29 0 0 chr18 45080796 45080830 -40908104 + AT_rich Low_complexity Low_complexity 1 34 0 242 79 0 0 chr18 45080830 45080868 -40908066 - L1PA16 LINE L1 -2 6164 6127 234 0 0 0 chr18 45082126 45082152 -40906782 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 495 299 153 26 chr18 45082419 45082727 -40906207 - LTR24-int LTR ERV1 -6065 693 347 367 200 0 12 chr18 45082757 45082837 -40906097 - LTR24-int LTR ERV1 -4471 652 574 223 170 0 0 chr18 45082849 45082896 -40906038 + T-rich Low_complexity Low_complexity 1 47 0 989 251 25 28 chr18 45082896 45083326 -40905608 - LTR24-int LTR ERV1 -4551 572 1 2332 167 48 48 chr18 45083327 45083787 -40905147 - LTR24 LTR ERV1 -1 466 7 404 295 81 7 chr18 45084214 45084363 -40904571 + MIR SINE MIR 14 173 -89 343 175 10 41 chr18 45084534 45084631 -40904303 + L1MC5 LINE L1 7832 7925 -36 934 297 48 33 chr18 45085199 45085712 -40903222 - L2 LINE L2 -19 3294 2723 26 74 0 0 chr18 45086516 45086570 -40902364 + AT_rich Low_complexity Low_complexity 1 54 0 2014 130 3 10 chr18 45086991 45087292 -40901642 + AluSx SINE Alu 3 301 -11 603 285 95 45 chr18 45088467 45088546 -40900388 + MER63A DNA MER1_type 1 75 -1613 900 222 12 118 chr18 45088546 45088952 -40899982 - MLT1A1 LTR MaLR -2 363 1 603 285 95 45 chr18 45088952 45089072 -40899862 + MER63A DNA MER1_type 75 210 0 306 349 46 26 chr18 45090609 45090804 -40898130 + MIR SINE MIR 4 202 -60 230 292 34 11 chr18 45090810 45090899 -40898035 - LTR67 LTR ERVL -7 550 460 2181 114 0 3 chr18 45091385 45091682 -40897252 - AluSq SINE Alu -17 296 1 636 80 7 133 chr18 45092186 45092254 -40896680 + L1PA15 LINE L1 6017 6057 -108 2042 145 51 14 chr18 45092254 45092605 -40896329 + THE1B LTR MaLR 1 364 0 636 80 7 133 chr18 45092605 45092687 -40896247 + L1PA15 LINE L1 6057 6148 -17 273 258 42 58 chr18 45092690 45092810 -40896124 - L1ME3A LINE L1 -127 6043 5926 340 302 126 40 chr18 45093097 45093375 -40895559 - HERVL LTR ERVL -3137 2517 2216 22 0 0 0 chr18 45094826 45094848 -40894086 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr18 45095028 45095056 -40893878 + AT_rich Low_complexity Low_complexity 1 28 0 502 237 30 23 chr18 45095066 45095197 -40893737 + L1MDa LINE L1 96 227 -6313 495 190 166 18 chr18 45095195 45095358 -40893576 + L1MDa LINE L1 1151 1337 -5203 * 3200 197 63 110 chr18 45095522 45096955 -40891979 + L1MDa LINE L1 1332 2689 -3851 357 24 0 0 chr18 45096955 45096997 -40891937 + (TA)n Simple_repeat Simple_repeat 2 43 0 3200 197 63 110 chr18 45096997 45097049 -40891885 + L1MDa LINE L1 2689 2742 -3798 4649 194 15 5 chr18 45097051 45098010 -40890924 + L1MA5A LINE L1 4017 4984 -1162 2274 89 115 0 chr18 45098037 45098375 -40890559 - MER51B LTR ERV1 0 377 1 7966 156 40 25 chr18 45098377 45100398 -40888536 - MER51B-int LTR ERV1 0 7816 5757 1584 111 100 7 chr18 45100398 45100754 -40888180 - LTR6A-int LTR ERV1 -2574 2643 2210 1954 190 63 22 chr18 45100765 45101223 -40887711 - LTR6A-int LTR ERV1 -3262 1955 1479 * 5080 123 79 23 chr18 45101201 45102093 -40886841 - LTR6A-int LTR ERV1 -4489 3327 2376 432 0 0 0 chr18 45102093 45102141 -40886793 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 5080 123 79 23 chr18 45102141 45102213 -40886721 - LTR6A-int LTR ERV1 -5440 2376 2309 3313 161 28 6 chr18 45102205 45103089 -40885845 - LTR6A-int LTR ERV1 -6558 1258 194 * 1997 194 35 89 chr18 45103089 45103739 -40885195 - LTR6A LTR ERV1 0 564 1 1503 67 16 0 chr18 45103740 45103933 -40885001 - MER51B-int LTR ERV1 -7620 196 1 2291 99 102 0 chr18 45103933 45104275 -40884659 - MER51B LTR ERV1 0 377 1 5938 163 28 6 chr18 45104275 45105552 -40883382 + L1MA5A LINE L1 4992 6295 -2 896 282 60 10 chr18 45105590 45106005 -40882929 + L1M4 LINE L1 2366 2801 -3345 * 1540 275 152 9 chr18 45105999 45106544 -40882390 + L1MD2 LINE L1 5723 6345 -14 3775 192 31 11 chr18 45107035 45107594 -40881340 + L1MC2 LINE L1 5175 5766 -578 1365 198 124 9 chr18 45107594 45107796 -40881138 + MLT1B LTR MaLR 1 178 -212 315 0 0 0 chr18 45107796 45107831 -40881103 + (CA)n Simple_repeat Simple_repeat 1 35 0 1365 198 124 9 chr18 45107831 45107976 -40880958 + MLT1B LTR MaLR 178 388 -2 3775 192 31 11 chr18 45107976 45108256 -40880678 + L1MC2 LINE L1 5766 6039 -305 1166 212 34 71 chr18 45108319 45108673 -40880261 + L1MC2 LINE L1 5994 6334 -10 1531 230 52 3 chr18 45108831 45109179 -40879755 - MLT1A1 LTR MaLR 0 365 1 233 311 11 11 chr18 45109419 45109509 -40879425 + CT-rich Low_complexity Low_complexity 5 94 0 1934 199 5 24 chr18 45110594 45110976 -40877958 + MSTD LTR MaLR 20 394 -2 27 49 0 0 chr18 45111612 45111653 -40877281 + AT_rich Low_complexity Low_complexity 1 41 0 21 36 0 0 chr18 45112041 45112069 -40876865 + AT_rich Low_complexity Low_complexity 1 28 0 512 211 0 0 chr18 45112746 45112841 -40876093 - L1M2 LINE L1 -4216 2633 2539 * 1057 318 66 12 chr18 45112839 45113261 -40875673 - L1M2 LINE L1 -6390 459 15 2670 222 32 59 chr18 45113471 45114439 -40874495 + L1M4c LINE L1 2218 3175 -3207 487 151 0 0 chr18 45114452 45114538 -40874396 + L1PB4 LINE L1 5537 5622 -681 354 175 0 0 chr18 45114540 45114597 -40874337 + AluS SINE Alu 1 57 -244 1170 156 0 0 chr18 45114705 45114884 -40874050 + AluSc SINE Alu 117 295 -14 1873 207 87 26 chr18 45114885 45115348 -40873586 + L1PB4 LINE L1 5609 6107 -49 1708 160 91 23 chr18 45115348 45115698 -40873236 + THE1C LTR MaLR 1 374 -1 1873 207 87 26 chr18 45115698 45115742 -40873192 + L1PB4 LINE L1 6107 6147 -9 5272 153 24 10 chr18 45115754 45116716 -40872218 + L1MA5A LINE L1 5320 6294 -3 28 0 0 0 chr18 45117468 45117496 -40871438 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr18 45117620 45117656 -40871278 + AT_rich Low_complexity Low_complexity 1 36 0 288 0 0 0 chr18 45117911 45117943 -40870991 + (A)n Simple_repeat Simple_repeat 1 32 0 367 361 39 0 chr18 45118246 45118401 -40870533 - MIR SINE MIR -61 201 41 2086 116 20 0 chr18 45118510 45118802 -40870132 - AluSx SINE Alu -14 298 1 267 223 48 0 chr18 45119057 45119160 -40869774 + (TA)n Simple_repeat Simple_repeat 2 109 0 775 130 9 0 chr18 45119180 45119295 -40869639 - MSTB LTR MaLR 0 428 313 1172 214 113 77 chr18 45119295 45119738 -40869196 - LTR1B LTR ERV1 0 826 368 822 86 0 8 chr18 45119738 45119855 -40869079 - L1P1 LINE L1 -351 5804 5689 606 76 0 0 chr18 45119828 45119907 -40869027 + L1PA5 LINE L1 6067 6145 -9 * 1179 114 0 0 chr18 45119916 45120183 -40868751 + (TA)n Simple_repeat Simple_repeat 1 267 0 1104 215 91 44 chr18 45120183 45120546 -40868388 - LTR1B LTR ERV1 -446 380 1 * 1735 145 41 28 chr18 45120546 45120856 -40868078 - MSTB LTR MaLR -112 314 1 555 290 7 0 chr18 45120856 45121001 -40867933 - MIR SINE MIR -99 163 18 400 368 40 6 chr18 45121162 45121336 -40867598 + MIR SINE MIR 13 192 -70 208 180 0 40 chr18 45122115 45122165 -40866769 + A-rich Low_complexity Low_complexity 3 50 0 1110 208 112 8 chr18 45123015 45123381 -40865553 - LTR37A LTR ERV1 -4 422 19 792 246 13 48 chr18 45123746 45123974 -40864960 - MER89 LTR ERV1 -13 546 327 1757 166 106 0 chr18 45123977 45124297 -40864637 + MER46B DNA MER2_type 1 229 -7 264 245 0 0 chr18 45124298 45124351 -40864583 - MER89 LTR ERV1 -245 314 262 2123 174 86 29 chr18 45124351 45124959 -40863975 + MER39 LTR ERV1 7 695 -12 571 232 0 4 chr18 45124959 45125142 -40863792 - MER89 LTR ERV1 -313 246 2 7912 237 47 18 chr18 45125144 45127077 -40861857 - MER89-int LTR ERV1 -1 6800 4812 1649 224 33 66 chr18 45127077 45127559 -40861375 + MLT1D LTR MaLR 40 505 0 307 265 24 12 chr18 45127559 45127642 -40861292 - MER89-int LTR ERV1 -5444 1357 1274 513 264 0 0 chr18 45127689 45127799 -40861135 - MER89-int LTR ERV1 -5518 1283 1174 1820 271 67 90 chr18 45127805 45128903 -40860031 - MER89-int LTR ERV1 -5729 1072 1 1450 243 88 7 chr18 45128903 45129323 -40859611 - MER89 LTR ERV1 0 559 6 955 249 112 4 chr18 45129408 45129685 -40859249 + MER92B LTR ERV1 283 589 -47 228 100 0 0 chr18 45130700 45130740 -40858194 + (T)n Simple_repeat Simple_repeat 1 40 0 911 168 11 42 chr18 45130886 45131076 -40857858 + MER34C LTR ERV1 37 220 -365 * 6372 156 16 62 chr18 45131070 45131486 -40857448 - HSMAR2 DNA Mariner -68 1234 800 2266 125 0 0 chr18 45131486 45131798 -40857136 - AluSq SINE Alu -1 312 1 6372 156 16 62 chr18 45131798 45132078 -40856856 - HSMAR2 DNA Mariner -502 800 509 1821 152 7 3 chr18 45132078 45132374 -40856560 + AluSx SINE Alu 13 309 -3 6372 156 16 62 chr18 45132374 45132969 -40855965 - HSMAR2 DNA Mariner -793 509 2 517 151 47 9 chr18 45132969 45133075 -40855859 + MER34C LTR ERV1 468 577 -8 728 175 0 16 chr18 45133191 45133317 -40855617 - FLAM_C SINE Alu -7 126 3 2834 199 131 3 chr18 45133402 45134029 -40854905 - MER39 LTR ERV1 0 707 1 271 274 28 19 chr18 45134751 45134857 -40854077 - L1M4 LINE L1 -1317 4829 4723 627 284 58 34 chr18 45135018 45135055 -40853879 + MIR SINE MIR 27 62 -200 2151 227 75 0 chr18 45135055 45135575 -40853359 - MER89 LTR ERV1 0 559 1 627 284 58 34 chr18 45135575 45135745 -40853189 + MIR SINE MIR 62 239 -23 22 35 0 0 chr18 45135793 45135822 -40853112 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr18 45135959 45135986 -40852948 + AT_rich Low_complexity Low_complexity 1 27 0 232 341 15 0 chr18 45136136 45136271 -40852663 - L1M4 LINE L1 -2097 4049 3913 370 296 321 25 chr18 45136365 45136608 -40852326 + L2 LINE L2 2343 2657 -657 25 31 0 0 chr18 45136942 45136974 -40851960 + AT_rich Low_complexity Low_complexity 1 32 0 25 0 0 0 chr18 45137587 45137612 -40851322 + AT_rich Low_complexity Low_complexity 1 25 0 551 314 76 19 chr18 45137711 45138186 -40850748 + L1MC/D LINE L1 5301 5802 -2006 1885 127 13 27 chr18 45138567 45138867 -40850067 + AluSg SINE Alu 1 296 -14 1814 220 19 8 chr18 45139032 45139409 -40849525 - MSTC LTR MaLR 0 428 48 235 301 96 15 chr18 45139579 45139851 -40849083 + L1MC/D LINE L1 3872 4165 -1981 24086 167 24 17 chr18 45140060 45145887 -40843047 + L1PA10 LINE L1 634 6482 -1 27 0 0 0 chr18 45146041 45146068 -40842866 + AT_rich Low_complexity Low_complexity 1 27 0 510 235 93 40 chr18 45146159 45146350 -40842584 - MER33 DNA MER1_type -2261 324 110 2243 91 3 0 chr18 45146350 45146648 -40842286 + AluSg SINE Alu 1 299 -11 510 235 93 40 chr18 45146648 45146758 -40842176 - MER33 DNA MER1_type -2475 110 7 2105 121 0 0 chr18 45147004 45147286 -40841648 + AluSx SINE Alu 6 287 -25 471 305 61 77 chr18 45147349 45147956 -40840978 + L1MC/D LINE L1 4626 5222 -924 319 334 64 29 chr18 45148002 45148316 -40840618 + L1MC/D LINE L1 5313 5637 -2171 21 57 0 0 chr18 45148421 45148456 -40840478 + AT_rich Low_complexity Low_complexity 1 35 0 472 178 173 47 chr18 45148474 45148688 -40840246 + L1MC5 LINE L1 7677 7917 -44 1972 110 55 0 chr18 45148814 45149106 -40839828 - AluSx SINE Alu -2 310 3 1892 255 90 29 chr18 45150741 45151522 -40837412 - L1M4 LINE L1 -1949 4197 3370 445 173 108 58 chr18 45151580 45151719 -40837215 + LTR45B LTR ERV1 344 489 0 310 111 270 0 chr18 45152035 45152098 -40836836 + MADE1 DNA Mariner 1 80 0 341 251 30 113 chr18 45152098 45152329 -40836605 - L1MC5 LINE L1 -83 7878 7667 1069 281 61 63 chr18 45152818 45153626 -40835308 - L1MC4a LINE L1 -1668 6140 5335 555 128 0 0 chr18 45154679 45154765 -40834169 + L1PA8 LINE L1 6082 6167 -5 308 346 49 39 chr18 45155008 45155213 -40833721 + MIR SINE MIR 53 259 -3 2019 112 35 0 chr18 45155214 45155501 -40833433 + AluSq SINE Alu 1 297 -16 1842 193 3 46 chr18 45156218 45156606 -40832328 - MLT1B LTR MaLR -12 378 8 644 299 5 16 chr18 45157499 45157686 -40831248 + MIR SINE MIR 58 242 -20 841 224 19 0 chr18 45158238 45158394 -40830540 - FAM SINE Alu -16 159 1 261 210 0 0 chr18 45158617 45158679 -40830255 + (TA)n Simple_repeat Simple_repeat 1 62 0 429 323 123 14 chr18 45159449 45159669 -40829265 - L2 LINE L2 -789 2525 2282 336 138 175 12 chr18 45159770 45159850 -40829084 - MER97a DNA MER1_type? -744 150 58 850 315 94 37 chr18 45159879 45160472 -40828462 - L2 LINE L2 -1019 2295 1669 266 364 75 26 chr18 45160629 45160857 -40828077 + MIR SINE MIR 6 244 -18 198 0 0 0 chr18 45160962 45160984 -40827950 + (TG)n Simple_repeat Simple_repeat 2 23 0 421 293 61 16 chr18 45161037 45161348 -40827586 + L1M4 LINE L1 3943 4267 -1879 1531 133 0 0 chr18 45161369 45161607 -40827327 + AluSg/x SINE Alu 65 302 0 498 261 121 65 chr18 45163136 45163442 -40825492 + MER5C DNA MER1_type 1 323 -1 2153 190 2 2 chr18 45163981 45164381 -40824553 + L1PA15 LINE L1 5764 6163 -2 1561 212 3 3 chr18 45164398 45164684 -40824250 + AluJo SINE Alu 1 289 -23 186 43 0 0 chr18 45164684 45164707 -40824227 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 1561 212 3 3 chr18 45164707 45164726 -40824208 + AluJo SINE Alu 288 306 -6 4330 156 56 30 chr18 45164852 45165237 -40823697 - MER4D LTR ERV1 -35 868 494 2210 111 0 3 chr18 45165237 45165543 -40823391 + AluY SINE Alu 1 305 -6 4330 156 56 30 chr18 45165543 45166003 -40822931 - MER4D LTR ERV1 -409 494 1 570 153 18 0 chr18 45166003 45166114 -40822820 + L1MB3 LINE L1 6071 6183 0 910 228 128 87 chr18 45166130 45166482 -40822452 + MLT2B1 LTR ERVL 1 372 -42 446 0 0 18 chr18 45166482 45166537 -40822397 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 910 228 128 87 chr18 45166537 45166574 -40822360 + MLT2B1 LTR ERVL 372 406 -8 1035 153 0 6 chr18 45166586 45166763 -40822171 - L1P LINE L1 -2237 3909 3734 5850 139 45 9 chr18 45166767 45168227 -40820707 + L1PA14 LINE L1 4644 6161 0 401 278 48 45 chr18 45168581 45168915 -40820019 + L1M4 LINE L1 3631 3965 -2181 1021 86 0 7 chr18 45168919 45169058 -40819876 + AluY SINE Alu 155 292 -19 220 255 0 0 chr18 45169095 45169146 -40819788 + (TG)n Simple_repeat Simple_repeat 2 52 0 225 338 41 15 chr18 45169329 45169669 -40819265 + L1M4 LINE L1 4181 4529 -1617 226 289 19 70 chr18 45169992 45170148 -40818786 + L1M4 LINE L1 4900 5047 -1099 21 0 0 0 chr18 45170177 45170198 -40818736 + AT_rich Low_complexity Low_complexity 1 21 0 547 318 23 33 chr18 45170215 45170429 -40818505 + MER20 DNA MER1_type 2 213 -6 253 212 61 81 chr18 45170555 45170654 -40818280 + L1M LINE L1 5255 5351 -2457 4841 21 3 0 chr18 45170829 45171393 -40817541 - L1PA4 LINE L1 -190 5965 5400 1187 55 18 12 chr18 45171394 45171558 -40817376 + L1PA4 LINE L1 5991 6155 0 209 33 33 0 chr18 45171578 45171608 -40817326 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 958 287 119 43 chr18 45171912 45172794 -40816140 + L1MEc LINE L1 791 1739 -4657 321 272 11 11 chr18 45172817 45172909 -40816025 + L1MC4 LINE L1 7901 7992 -50 723 153 0 0 chr18 45173407 45173531 -40815403 + L1PA15 LINE L1 6040 6163 -2 2512 264 52 26 chr18 45173635 45174427 -40814507 - L1M4 LINE L1 -5392 1150 339 189 74 0 0 chr18 45174487 45174514 -40814420 + (TCC)n Simple_repeat Simple_repeat 2 28 0 1375 234 0 0 chr18 45174514 45174788 -40814146 - AluJo SINE Alu -34 278 5 557 220 24 152 chr18 45174797 45175093 -40813841 - L1M4 LINE L1 -6283 259 2 201 267 17 0 chr18 45175152 45175212 -40813722 + (TATATG)n Simple_repeat Simple_repeat 6 66 0 23 0 0 0 chr18 45176024 45176047 -40812887 + AT_rich Low_complexity Low_complexity 1 23 0 33 25 0 0 chr18 45176151 45176191 -40812743 + AT_rich Low_complexity Low_complexity 1 40 0 641 218 8 0 chr18 45176293 45176417 -40812517 + MLT1B LTR MaLR 1 125 -265 271 215 241 0 chr18 45176444 45176523 -40812411 + MIR SINE MIR 50 147 -115 23 68 0 0 chr18 45176731 45176775 -40812159 + AT_rich Low_complexity Low_complexity 1 44 0 1543 211 35 35 chr18 45176812 45176950 -40811984 - MLT1A2 LTR MaLR 0 374 237 2266 165 21 21 chr18 45176950 45177375 -40811559 + MSTB LTR MaLR 1 425 -1 1543 211 35 35 chr18 45177375 45177610 -40811324 - MLT1A2 LTR MaLR -136 238 1 946 293 58 27 chr18 45177635 45178153 -40810781 - MER90 LTR ERV1 -15 560 69 192 152 0 0 chr18 45178167 45178200 -40810734 + CT-rich Low_complexity Low_complexity 2 34 0 202 182 0 0 chr18 45179396 45179429 -40809505 + (CA)n Simple_repeat Simple_repeat 2 34 0 29 60 0 0 chr18 45181964 45182014 -40806920 + AT_rich Low_complexity Low_complexity 1 50 0 1115 207 8 28 chr18 45182205 45182456 -40806478 - LTR53 LTR ERVL 0 519 274 1446 226 144 9 chr18 45182705 45183142 -40805792 + LTR54B LTR ERV1 1 496 -2 2278 104 0 19 chr18 45183300 45183616 -40805318 + AluSg SINE Alu 1 310 0 4326 259 61 24 chr18 45183801 45185478 -40803456 + L1MC3 LINE L1 2619 4357 -1789 2114 207 150 66 chr18 45185476 45186314 -40802620 + L1MC3 LINE L1 5215 5364 -782 * 8251 171 13 4 chr18 45186322 45187010 -40801924 - L1PA11 LINE L1 0 6174 5494 2044 121 10 10 chr18 45187010 45187317 -40801617 - AluSc SINE Alu -2 307 1 8251 171 13 4 chr18 45187317 45188971 -40799963 - L1PA11 LINE L1 -680 5494 3815 5908 170 7 12 chr18 45188974 45190091 -40798843 + L1PA11 LINE L1 2706 3817 -2329 3334 215 134 77 chr18 45190091 45191024 -40797910 + L1MC3 LINE L1 6121 7223 -562 260 275 38 0 chr18 45191024 45191104 -40797830 + MLT1F1 LTR MaLR 51 133 -434 3334 215 134 77 chr18 45191104 45191368 -40797566 + L1MC3 LINE L1 7223 7470 -315 3944 144 77 3 chr18 45191372 45192058 -40796876 + Tigger1 DNA MER2_type 1682 2418 0 345 346 21 8 chr18 45192349 45192585 -40796349 + LTR16A1 LTR ERVL 18 255 -195 1073 242 26 78 chr18 45192680 45193065 -40795869 + MLT1A1 LTR MaLR 1 365 0 1621 184 21 10 chr18 45195038 45195437 -40793497 - MER61D LTR ERV1 0 501 1 614 316 109 3 chr18 45195690 45195984 -40792950 + L2 LINE L2 2377 2701 -613 322 362 21 0 chr18 45196657 45196798 -40792136 - MIR3 SINE MIR -21 187 44 184 306 35 47 chr18 45198032 45198117 -40790817 + MIR SINE MIR 58 141 -121 205 267 0 0 chr18 45200685 45200730 -40788204 + GA-rich Low_complexity Low_complexity 2 46 0 261 318 11 13 chr18 45203088 45203192 -40785742 + MIR SINE MIR 34 137 -71 2408 90 0 3 chr18 45203616 45203926 -40785008 + AluSc SINE Alu 1 309 0 1660 180 35 7 chr18 45204489 45204778 -40784156 + AluJb SINE Alu 3 299 -13 266 130 0 37 chr18 45205638 45205692 -40783242 + (CATATA)n Simple_repeat Simple_repeat 1 52 0 252 303 33 42 chr18 45206117 45206283 -40782651 - MIR SINE MIR -62 146 33 28 0 0 0 chr18 45207660 45207688 -40781246 + AT_rich Low_complexity Low_complexity 1 28 0 1986 177 43 40 chr18 45208090 45208639 -40780295 - MLT2A2 LTR ERVL 0 554 1 2620 19 0 7 chr18 45208898 45209205 -40779729 + AluY SINE Alu 1 305 -6 233 228 0 18 chr18 45209455 45209512 -40779422 - L2 LINE L2 -3 3310 3255 24 0 0 0 chr18 45211426 45211450 -40777484 + AT_rich Low_complexity Low_complexity 1 24 0 1195 255 102 33 chr18 45211654 45212209 -40776725 - LTR29 LTR ERV1 0 622 1 283 287 102 37 chr18 45212593 45212701 -40776233 - MIR SINE MIR -63 145 31 316 185 0 0 chr18 45213302 45213356 -40775578 - MER115 DNA AcHobo 0 693 640 540 380 83 11 chr18 45213500 45213766 -40775168 - MER115 DNA AcHobo -406 287 3 351 252 215 9 chr18 45214033 45214140 -40774794 + MER5A DNA MER1_type 61 189 0 301 329 51 0 chr18 45214240 45214377 -40774557 + L1MDa LINE L1 2461 2604 -3936 237 341 59 0 chr18 45214491 45214576 -40774358 + L2 LINE L2 3224 3313 0 229 135 39 0 chr18 45215478 45215530 -40773404 + (TA)n Simple_repeat Simple_repeat 1 54 0 334 238 70 63 chr18 45215753 45215896 -40773038 + L1MDa LINE L1 2461 2604 -3936 1539 98 20 16 chr18 45216086 45216331 -40772603 - L1PB2 LINE L1 -2 6149 5904 257 253 105 0 chr18 45216338 45216433 -40772501 + L1MDa LINE L1 2838 2942 -3598 26 30 0 0 chr18 45216566 45216599 -40772335 + AT_rich Low_complexity Low_complexity 1 33 0 566 224 14 21 chr18 45216724 45216867 -40772067 + MER46A DNA MER2_type 1 142 -94 2751 145 19 9 chr18 45216870 45217240 -40771694 + MER46A DNA MER2_type 2263 2628 -103 192 40 0 0 chr18 45217240 45217265 -40771669 + (TC)n Simple_repeat Simple_repeat 2 26 0 2751 145 19 9 chr18 45217265 45217279 -40771655 + MER46A DNA MER2_type 2628 161 -2570 324 102 0 0 chr18 45217279 45217328 -40771606 + (CA)n Simple_repeat Simple_repeat 2 50 0 2751 145 19 9 chr18 45217328 45217405 -40771529 + MER46A DNA MER2_type 160 235 -1 238 232 32 21 chr18 45217405 45217500 -40771434 + L1MDa LINE L1 3266 3361 -3179 402 296 90 29 chr18 45217507 45217568 -40771366 + L1MDa LINE L1 3479 3535 -3005 2115 126 0 0 chr18 45217568 45217869 -40771065 + AluSx SINE Alu 1 301 -11 402 296 90 29 chr18 45217869 45218186 -40770748 + L1MDa LINE L1 3535 3880 -2660 774 296 125 13 chr18 45218234 45218836 -40770098 + L1MDa LINE L1 3971 4639 -1901 434 287 100 47 chr18 45218941 45219241 -40769693 + L1MB8 LINE L1 2667 2982 -3164 379 297 116 0 chr18 45219241 45219379 -40769555 + LTR41 LTR ERVL 1 154 -619 701 251 34 89 chr18 45219619 45219910 -40769024 + LTR41 LTR ERVL 498 772 -1 522 235 69 35 chr18 45220059 45220319 -40768615 + L1MB8 LINE L1 3821 4089 -2057 287 267 0 52 chr18 45220370 45220486 -40768448 + L1MB8 LINE L1 5122 5231 -915 196 194 41 6 chr18 45220503 45220673 -40768261 + (TA)n Simple_repeat Simple_repeat 1 176 0 863 283 71 27 chr18 45220697 45221535 -40767399 + L1MB8 LINE L1 5254 6159 -11 184 326 59 96 chr18 45221678 45221916 -40767018 - L2 LINE L2 -1274 2040 1816 2082 126 3 7 chr18 45221916 45222225 -40766709 + AluSc SINE Alu 1 308 -1 184 326 59 96 chr18 45222225 45222308 -40766626 - L2 LINE L2 -1498 1816 1731 309 26 0 0 chr18 45222503 45222541 -40766393 + (TG)n Simple_repeat Simple_repeat 1 38 0 10406 189 80 31 chr18 45222740 45226969 -40761965 - L1 LINE L1 -2740 4825 17 457 230 11 0 chr18 45226977 45227064 -40761870 - MER2 DNA MER2_type -251 94 7 28 0 0 0 chr18 45227159 45227187 -40761747 + AT_rich Low_complexity Low_complexity 1 28 0 357 238 30 20 chr18 45227536 45227637 -40761297 - LTR41 LTR ERVL -583 190 89 393 321 89 21 chr18 45227793 45227983 -40760951 - L2 LINE L2 -1650 1664 1462 484 182 83 55 chr18 45228136 45228317 -40760617 - MER53 DNA DNA -1 188 3 2172 116 8 91 chr18 45229265 45229588 -40759346 + THE1B LTR MaLR 1 349 -15 2212 119 3 0 chr18 45229588 45229898 -40759036 - AluSp SINE Alu -2 311 1 2097 139 0 7 chr18 45229898 45230208 -40758726 - AluSx SINE Alu -4 308 1 2172 116 8 91 chr18 45230208 45230280 -40758654 + THE1B LTR MaLR 347 364 0 624 288 85 36 chr18 45230378 45230940 -40757994 + L1MB8 LINE L1 4363 4952 -1194 1400 250 23 23 chr18 45230999 45231073 -40757861 + L1MB8 LINE L1 5716 5789 -389 1935 187 49 35 chr18 45231073 45231501 -40757433 - Tigger2a DNA MER2_type 0 434 1 1400 250 23 23 chr18 45231501 45231844 -40757090 + L1MB8 LINE L1 5789 6129 -49 338 188 0 62 chr18 45231841 45231937 -40756997 + L1MB7 LINE L1 6090 6179 -5 * 865 296 103 35 chr18 45232167 45232556 -40756378 + L1ME3A LINE L1 5262 5623 -539 2870 185 37 2 chr18 45232556 45233069 -40755865 + LTR26B LTR ERV1 1 531 0 865 296 103 35 chr18 45233069 45233365 -40755569 + L1ME3A LINE L1 5623 5994 -168 456 254 23 60 chr18 45233393 45233526 -40755408 + MER34 LTR ERV1 2 145 -397 322 276 66 44 chr18 45233633 45233761 -40755173 + MER34B LTR ERV1 281 416 -149 1685 203 42 14 chr18 45233761 45234116 -40754818 - MLT1A1 LTR MaLR 0 365 1 322 276 66 44 chr18 45234116 45234168 -40754766 + MER34B LTR ERV1 416 465 -100 378 235 110 0 chr18 45234242 45234378 -40754556 + L1ME3A LINE L1 6011 6161 -9 1988 225 61 15 chr18 45235308 45235765 -40753169 + MLT2B1 LTR ERVL 1 478 -42 250 250 0 0 chr18 45235766 45235834 -40753100 + (TA)n Simple_repeat Simple_repeat 1 68 0 342 113 0 0 chr18 45235837 45235890 -40753044 + MLT2B1 LTR ERVL 461 513 -2 2108 96 3 0 chr18 45235976 45236260 -40752674 + AluY SINE Alu 1 269 -42 261 26 0 26 chr18 45236260 45236298 -40752636 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 2108 96 3 0 chr18 45236298 45236313 -40752621 + AluY SINE Alu 269 282 -29 2060 138 7 3 chr18 45236325 45236630 -40752304 + AluSx SINE Alu 1 306 -6 746 256 33 9 chr18 45237305 45237516 -40751418 + MLT1J LTR MaLR 3 218 -293 233 330 44 0 chr18 45237573 45237664 -40751270 + MLT1J LTR MaLR 271 365 -146 2300 146 74 22 chr18 45237797 45238202 -40750732 + MSTC LTR MaLR 3 428 0 374 259 58 35 chr18 45238202 45238376 -40750558 + MIR SINE MIR 85 262 0 464 268 99 52 chr18 45238993 45239206 -40749728 - MIR SINE MIR 0 262 40 253 286 143 15 chr18 45239332 45239465 -40749469 + L2 LINE L2 3164 3313 0 234 329 0 0 chr18 45239513 45239592 -40749342 + (CA)n Simple_repeat Simple_repeat 1 79 0 23 0 0 0 chr18 45239742 45239765 -40749169 + AT_rich Low_complexity Low_complexity 1 23 0 1003 215 0 4 chr18 45241005 45241242 -40747692 - L1 LINE L1 -1096 5050 4815 * 3352 125 15 2 chr18 45241240 45241923 -40747011 + L1PB1 LINE L1 5102 5791 -360 328 175 0 136 chr18 45241965 45242068 -40746866 + L1MC4 LINE L1 6614 6702 -1340 239 65 0 0 chr18 45242110 45242156 -40746778 - LTR66 LTR ERVL -171 439 394 2296 98 3 0 chr18 45244474 45244769 -40744165 + AluSp SINE Alu 1 296 -17 277 150 0 0 chr18 45244958 45244998 -40743936 + Alu SINE Alu 1 40 -262 369 0 0 0 chr18 45246663 45246704 -40742230 + (TA)n Simple_repeat Simple_repeat 1 41 0 2470 116 0 0 chr18 45246711 45247074 -40741860 + L1PB1 LINE L1 5789 6151 0 580 257 88 51 chr18 45247461 45247526 -40741408 - MLT1F LTR MaLR -7 535 474 435 101 0 63 chr18 45247526 45247605 -40741329 + MADE1 DNA Mariner 4 77 -3 580 257 88 51 chr18 45247605 45247835 -40741099 - MLT1F LTR MaLR -68 474 229 467 264 69 29 chr18 45247861 45248035 -40740899 - MLT1F LTR MaLR -414 181 1 614 261 219 0 chr18 45248752 45248967 -40739967 + MIR SINE MIR 1 262 0 292 352 63 14 chr18 45249693 45249835 -40739099 - MIR SINE MIR -79 183 35 201 237 0 0 chr18 45250315 45250353 -40738581 + MIR SINE MIR 220 257 -5 1531 144 5 0 chr18 45250494 45250716 -40738218 + AluSg/x SINE Alu 76 298 -12 1197 186 66 21 chr18 45253001 45253335 -40735599 - L1MC2 LINE L1 -1 6343 5995 2173 96 0 17 chr18 45253339 45253631 -40735303 - AluSg SINE Alu -18 292 6 25 0 0 0 chr18 45253877 45253902 -40735032 + AT_rich Low_complexity Low_complexity 1 25 0 205 315 0 19 chr18 45254206 45254260 -40734674 + MIR SINE MIR 15 67 -195 185 91 0 30 chr18 45254771 45254804 -40734130 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1117 177 25 96 chr18 45256774 45256863 -40732071 - L1 LINE L1 -1430 4716 4622 2418 173 13 11 chr18 45256863 45257315 -40731619 - L1PA16 LINE L1 -16 6150 5698 644 179 0 0 chr18 45257315 45257421 -40731513 - U6 snRNA snRNA 0 107 2 1117 177 25 96 chr18 45257421 45257726 -40731208 - L1 LINE L1 -1522 4624 4349 261 0 0 0 chr18 45258276 45258305 -40730629 + (GA)n Simple_repeat Simple_repeat 2 30 0 626 290 76 35 chr18 45259309 45259729 -40729205 - L1MEd LINE L1 -1088 5041 4640 207 0 0 0 chr18 45259729 45259752 -40729182 + (CA)n Simple_repeat Simple_repeat 2 24 0 626 290 76 35 chr18 45259752 45260156 -40728778 - L1MEd LINE L1 -1489 4640 4183 1035 231 4 9 chr18 45260156 45260381 -40728553 - AluJo SINE Alu -21 291 68 35035 90 11 8 chr18 45260658 45266779 -40722155 + L1PA6 LINE L1 11 6146 -8 2053 124 6 29 chr18 45266784 45267099 -40721835 + AluSx SINE Alu 1 308 -4 252 276 38 19 chr18 45267423 45267528 -40721406 - L1MEd LINE L1 -2503 3626 3520 615 305 91 32 chr18 45267533 45267907 -40721027 - L1MEd LINE L1 -2678 3451 3056 231 305 51 25 chr18 45268026 45268262 -40720672 - L1MEd LINE L1 -3245 2884 2643 234 173 0 67 chr18 45268324 45268399 -40720535 + (TTTA)n Simple_repeat Simple_repeat 3 72 0 728 340 42 49 chr18 45268405 45268978 -40719956 - L1MEd LINE L1 -5000 1119 551 344 339 34 34 chr18 45269406 45269583 -40719351 + L2 LINE L2 3137 3313 0 261 365 101 0 chr18 45269890 45270038 -40718896 - L2 LINE L2 -2 3311 3149 194 298 0 0 chr18 45270172 45270219 -40718715 - MIR SINE MIR -4 258 212 2337 100 0 0 chr18 45270250 45270559 -40718375 - AluSc SINE Alu 0 309 1 271 338 68 8 chr18 45270658 45270791 -40718143 - MIR SINE MIR -121 141 1 207 0 0 0 chr18 45271293 45271316 -40717618 + (TTA)n Simple_repeat Simple_repeat 2 24 0 324 174 0 58 chr18 45272164 45272233 -40716701 + MER5B DNA MER1_type 77 141 -37 250 196 0 175 chr18 45272344 45272441 -40716493 - MER5B DNA MER1_type -3 175 96 6920 69 35 0 chr18 45274478 45275479 -40713455 - L1PA8 LINE L1 -1 6171 5164 529 224 20 122 chr18 45276470 45276692 -40712242 + MLT1D LTR MaLR 31 234 -233 1561 199 43 24 chr18 45276699 45277075 -40711859 + MLT1B LTR MaLR 1 383 -7 446 278 28 28 chr18 45277083 45277259 -40711675 + MLT1D LTR MaLR 286 461 -6 234 91 0 0 chr18 45277654 45277687 -40711247 + (TG)n Simple_repeat Simple_repeat 2 34 0 2142 113 24 0 chr18 45279427 45279718 -40709216 + AluSc SINE Alu 1 298 -11 806 212 90 31 chr18 45279735 45279794 -40709140 + AluJb SINE Alu 65 119 -193 189 107 0 0 chr18 45279794 45279822 -40709112 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 806 212 90 31 chr18 45279822 45279984 -40708950 + AluJb SINE Alu 119 299 -13 418 268 59 26 chr18 45280986 45281139 -40707795 - MIR3 SINE MIR -21 187 30 1720 214 68 67 chr18 45281297 45282424 -40706510 + L1ME2 LINE L1 5024 6155 -9 314 332 144 10 chr18 45282665 45282885 -40706049 - MIR SINE MIR -8 254 4 1639 153 142 11 chr18 45282944 45283317 -40705617 + MSTA LTR MaLR 7 428 0 1011 25 0 0 chr18 45283524 45283645 -40705289 + L1PA2 LINE L1 6034 6154 -1 208 258 55 117 chr18 45284024 45284152 -40704782 - L2 LINE L2 -1 3312 3193 24 32 0 0 chr18 45285098 45285129 -40703805 + AT_rich Low_complexity Low_complexity 1 31 0 2709 208 48 27 chr18 45285483 45286304 -40702630 - L1MDa LINE L1 -4443 2097 1260 281 304 104 17 chr18 45286371 45286486 -40702448 - L1MDa LINE L1 -5658 882 758 1522 215 67 89 chr18 45286501 45286737 -40702197 - L1MDa LINE L1 -5960 580 340 463 154 0 0 chr18 45286737 45286815 -40702119 + MADE1 DNA Mariner 3 80 0 1522 215 67 89 chr18 45286815 45287155 -40701779 - L1MDa LINE L1 -6200 340 25 28 48 0 0 chr18 45287210 45287252 -40701682 + AT_rich Low_complexity Low_complexity 1 42 0 347 260 65 41 chr18 45287550 45287673 -40701261 + MER91B DNA MER1_type 5 130 -60 237 347 0 0 chr18 45287684 45287759 -40701175 + MER91B DNA MER1_type 89 163 -27 244 314 57 9 chr18 45289050 45289155 -40699779 - L2 LINE L2 -17 3296 3187 193 414 9 0 chr18 45290040 45290151 -40698783 - L2 LINE L2 -1018 2296 2185 341 329 97 36 chr18 45290169 45290401 -40698533 + MIR SINE MIR 26 262 0 191 363 120 40 chr18 45290457 45291310 -40697624 - L2 LINE L2 -1223 2091 1171 1236 207 70 53 chr18 45292806 45293091 -40695843 + AluJo SINE Alu 1 290 -12 25 0 0 0 chr18 45294061 45294086 -40694848 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr18 45295716 45295739 -40693195 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr18 45295805 45295834 -40693100 + AT_rich Low_complexity Low_complexity 1 29 0 270 328 57 30 chr18 45295896 45296158 -40692776 + HAL1b LINE L1 406 674 -674 9162 30 0 0 chr18 45296448 45298338 -40690596 + L1PA3 LINE L1 4277 6167 0 238 159 29 0 chr18 45298350 45298419 -40690515 + A-rich Low_complexity Low_complexity 2 72 0 22 0 0 0 chr18 45298539 45298561 -40690373 + AT_rich Low_complexity Low_complexity 1 22 0 2895 3 0 0 chr18 45298634 45298945 -40689989 + AluYa5 SINE Alu 1 311 0 2189 56 0 0 chr18 45298962 45299214 -40689720 + AluY SINE Alu 1 252 -59 303 292 53 18 chr18 45299736 45299849 -40689085 + L2 LINE L2 3184 3300 -13 453 277 63 46 chr18 45300031 45300334 -40688600 + L1ME4a LINE L1 5542 5849 -272 225 204 0 0 chr18 45300870 45300914 -40688020 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 204 97 0 0 chr18 45301798 45301829 -40687105 + (CA)n Simple_repeat Simple_repeat 2 32 0 260 307 58 61 chr18 45302174 45302500 -40686434 + LTR33A LTR ERVL 1 325 -198 645 38 0 0 chr18 45303352 45303432 -40685502 + (TTTTC)n Simple_repeat Simple_repeat 1 80 0 981 114 29 0 chr18 45303433 45303608 -40685326 + CT-rich Low_complexity Low_complexity 1 180 0 612 189 5 141 chr18 45303633 45303818 -40685116 - FRAM SINE Alu -7 169 10 273 339 57 51 chr18 45304689 45304866 -40684068 + MIR SINE MIR 34 211 -51 1548 239 68 12 chr18 45304912 45305326 -40683608 - MER74A LTR ERVL 0 558 122 197 362 69 9 chr18 45305903 45306019 -40682915 + L2 LINE L2 2678 2800 -514 250 356 77 58 chr18 45306117 45306429 -40682505 + L2 LINE L2 2889 3206 -66 312 330 55 90 chr18 45306489 45306689 -40682245 + L2 LINE L2 3034 3226 -46 311 378 26 19 chr18 45308709 45308865 -40680069 - MIR3 SINE MIR -14 194 38 201 340 0 58 chr18 45310678 45310781 -40678153 + MIR SINE MIR 94 190 -72 243 0 0 0 chr18 45310891 45310918 -40678016 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1667 124 68 0 chr18 45310938 45311187 -40677747 - AluSg SINE Alu -44 266 1 288 280 0 27 chr18 45311292 45311367 -40677567 + L2 LINE L2 3232 3304 -9 226 263 0 0 chr18 45311443 45311500 -40677434 - MLT1I LTR MaLR -2 407 351 315 275 50 17 chr18 45311751 45311871 -40677063 - MLT1I LTR MaLR -276 133 10 435 320 61 78 chr18 45312106 45312531 -40676403 + L2 LINE L2 2881 3298 -15 938 185 19 57 chr18 45312612 45312823 -40676111 - MER58A DNA MER1_type 0 224 22 303 296 91 0 chr18 45312934 45313066 -40675868 + MIR SINE MIR 106 249 -13 388 277 79 35 chr18 45314260 45314462 -40674472 - L1ME4a LINE L1 0 6121 5911 7284 48 1 3 chr18 45315610 45316513 -40672421 + L1PA5 LINE L1 5254 6154 0 1574 135 43 4 chr18 45316524 45316805 -40672129 + L1MA6 LINE L1 6003 6294 -6 303 305 54 45 chr18 45316964 45317295 -40671639 - L1ME4a LINE L1 -226 5895 5562 493 214 0 0 chr18 45317306 45317390 -40671544 + AluJ/FLAM SINE Alu 5 88 -224 190 147 29 0 chr18 45317479 45317513 -40671421 + MIR SINE MIR 223 257 -5 278 357 27 0 chr18 45317832 45317944 -40670990 + MIR SINE MIR 29 143 -119 957 288 90 28 chr18 45319702 45320126 -40668808 + LTR16A LTR ERVL 1 450 0 3889 219 85 77 chr18 45320463 45320604 -40668330 - L1MD3 LINE L1 -5 8037 7899 225 0 0 0 chr18 45320604 45320629 -40668305 + (TC)n Simple_repeat Simple_repeat 2 26 0 3889 219 85 77 chr18 45320629 45322008 -40666926 - L1MD3 LINE L1 -143 7899 6522 919 219 89 24 chr18 45322011 45322257 -40666677 - MLT1A2 LTR MaLR -4 370 109 1409 262 58 42 chr18 45322276 45323046 -40665888 - L1MC4a LINE L1 -1323 6485 5703 277 314 88 40 chr18 45323070 45323886 -40665048 - L1MC4a LINE L1 -1128 5018 4164 35 0 0 0 chr18 45324236 45324271 -40664663 + AT_rich Low_complexity Low_complexity 1 35 0 553 187 173 7 chr18 45324584 45324723 -40664211 - MER58A DNA MER1_type -15 209 48 250 276 52 26 chr18 45324790 45324906 -40664028 - HAL1b LINE L1 -773 575 457 26 82 0 0 chr18 45325873 45325934 -40663000 + AT_rich Low_complexity Low_complexity 1 61 0 2141 139 38 13 chr18 45326019 45326458 -40662476 + Tigger2 DNA MER2_type 1 2718 0 251 304 20 10 chr18 45326458 45326556 -40662378 - MER94 DNA DNA -35 99 1 2015 204 3 0 chr18 45327049 45327436 -40661498 - L1MB5 LINE L1 -6 6168 5781 461 195 0 0 chr18 45327436 45327513 -40661421 + Tigger4(Zombi) DNA MER2_type 2 78 -2653 * 4803 147 37 11 chr18 45327500 45328157 -40660777 + Tigger4(Zombi) DNA MER2_type 1859 2544 -187 2329 200 37 11 chr18 45328157 45328621 -40660313 - MER66A LTR ERV1 -2 476 1 4803 147 37 11 chr18 45328621 45328811 -40660123 + Tigger4(Zombi) DNA MER2_type 2544 2728 -3 343 246 0 27 chr18 45328813 45328923 -40660011 - L1MB5 LINE L1 -390 5784 5678 272 333 90 6 chr18 45330188 45330344 -40658590 + MIR SINE MIR 14 182 -80 2660 154 29 2 chr18 45330732 45331185 -40657749 - LTR24 LTR ERV1 -2 465 1 2621 168 48 37 chr18 45331395 45331937 -40656997 - MER34C LTR ERV1 -3 582 35 2749 196 78 17 chr18 45331959 45332621 -40656313 - MER44D DNA MER2_type 0 705 3 180 0 0 0 chr18 45333791 45333811 -40655123 + (TA)n Simple_repeat Simple_repeat 1 20 0 14199 38 9 1 chr18 45333811 45336299 -40652635 - L1PA4 LINE L1 -19 6136 3635 337 279 16 16 chr18 45336370 45336499 -40652435 + CT-rich Low_complexity Low_complexity 2 130 0 402 280 179 23 chr18 45336659 45336916 -40652018 + L2 LINE L2 1464 1760 -1554 722 311 110 74 chr18 45336927 45337731 -40651203 + L2 LINE L2 2477 3308 -5 27 49 0 0 chr18 45337731 45337772 -40651162 + AT_rich Low_complexity Low_complexity 1 41 0 313 323 114 30 chr18 45339771 45339938 -40648996 + MIR3 SINE MIR 23 203 -5 242 351 64 21 chr18 45340100 45340194 -40648740 - L2 LINE L2 -27 3245 3148 25 0 0 0 chr18 45340290 45340315 -40648619 + AT_rich Low_complexity Low_complexity 1 25 0 299 253 0 21 chr18 45340319 45340414 -40648520 - MER103 DNA DNA -63 103 11 376 258 116 58 chr18 45341616 45341891 -40647043 - LTR37A LTR ERV1 -3 423 133 794 220 77 64 chr18 45342512 45343056 -40645878 - LTR48 LTR ERV1 0 787 1 1634 11 0 0 chr18 45343247 45343430 -40645504 - L1P1 LINE L1 -547 5608 5426 * 3434 5 0 0 chr18 45343426 45343812 -40645122 + L1HS LINE L1 5768 6153 -2 216 0 0 0 chr18 45343815 45343839 -40645095 + (A)n Simple_repeat Simple_repeat 1 24 0 2315 92 7 0 chr18 45343865 45344160 -40644774 - AluSq SINE Alu -14 299 3 231 175 0 0 chr18 45344845 45344902 -40644032 + (TG)n Simple_repeat Simple_repeat 1 57 0 667 330 59 15 chr18 45345549 45345873 -40643061 - LTR40b LTR ERVL -2 460 123 3442 242 66 32 chr18 45345874 45347148 -40641786 + L1ME1 LINE L1 3949 5336 -830 1905 138 7 3 chr18 45347148 45347437 -40641497 + AluSx SINE Alu 1 290 -22 3442 242 66 32 chr18 45347437 45348291 -40640643 + L1ME1 LINE L1 5336 6160 -6 325 283 65 36 chr18 45348341 45348479 -40640455 - LTR50 LTR ERVL -636 159 18 2204 96 10 3 chr18 45348592 45348895 -40640039 + AluSq SINE Alu 1 305 -8 348 367 204 22 chr18 45349361 45349685 -40639249 + L3 LINE CR1 1176 1558 -19 1626 201 0 0 chr18 45350688 45350962 -40637972 - AluJb SINE Alu -33 279 6 1095 55 0 0 chr18 45351801 45351929 -40637005 - AluY SINE Alu -122 189 62 1323 159 26 4 chr18 45351934 45352161 -40636773 + MSTB LTR MaLR 195 426 0 267 168 46 6 chr18 45352288 45352461 -40636473 + (TA)n Simple_repeat Simple_repeat 1 180 0 263 210 72 6 chr18 45352472 45352639 -40636295 + (TA)n Simple_repeat Simple_repeat 2 179 0 23 33 0 0 chr18 45353341 45353371 -40635563 + AT_rich Low_complexity Low_complexity 1 30 0 25 31 0 0 chr18 45353661 45353693 -40635241 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr18 45355106 45355134 -40633800 + AT_rich Low_complexity Low_complexity 1 28 0 468 0 0 0 chr18 45356527 45356579 -40632355 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 207 250 0 0 chr18 45356579 45356623 -40632311 + (TG)n Simple_repeat Simple_repeat 1 44 0 1206 233 35 0 chr18 45356628 45356886 -40632048 - MER68 LTR ERV1 0 562 296 465 240 70 16 chr18 45356875 45357004 -40631930 - MER68 LTR ERV1 -424 138 3 * 30 45 0 0 chr18 45357014 45357058 -40631876 + AT_rich Low_complexity Low_complexity 1 44 0 564 309 95 21 chr18 45357068 45357353 -40631581 - L2 LINE L2 0 3313 3008 358 291 60 0 chr18 45357361 45357478 -40631456 - L2 LINE L2 -1366 1948 1825 2012 125 7 0 chr18 45357949 45358236 -40630698 - AluSx SINE Alu -16 296 8 1933 153 93 23 chr18 45358308 45358706 -40630228 - MSTA LTR MaLR 0 428 3 484 290 97 7 chr18 45359020 45359165 -40629769 - MIR SINE MIR -59 203 46 393 22 0 0 chr18 45360973 45361019 -40627915 + (TG)n Simple_repeat Simple_repeat 1 46 0 597 113 47 9 chr18 45361541 45361647 -40627287 + L1PA13 LINE L1 6054 6163 0 287 352 19 0 chr18 45361780 45361885 -40627049 + MIR SINE MIR 33 139 -123 222 228 30 99 chr18 45362611 45362712 -40626222 + MIR SINE MIR 106 199 -63 2113 74 0 4 chr18 45362774 45363043 -40625891 + AluSq SINE Alu 37 304 -9 1921 14 0 14 chr18 45363203 45363426 -40625508 + AluYb8 SINE Alu 98 317 -1 351 308 49 17 chr18 45363954 45364097 -40624837 + MIR SINE MIR 45 191 -64 434 308 51 6 chr18 45364566 45364722 -40624212 + MIR SINE MIR 29 191 -71 2184 92 0 36 chr18 45364989 45365293 -40623641 + AluSg SINE Alu 1 293 -17 23 0 0 0 chr18 45365409 45365432 -40623502 + AT_rich Low_complexity Low_complexity 1 23 0 1121 154 9 79 chr18 45365441 45365668 -40623266 - MLT1D LTR MaLR 0 505 295 23 0 0 0 chr18 45366313 45366336 -40622598 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr18 45367128 45367149 -40621785 + AT_rich Low_complexity Low_complexity 1 21 0 2081 126 0 0 chr18 45368029 45368315 -40620619 + AluSx SINE Alu 3 288 -24 221 0 0 33 chr18 45368318 45368348 -40620586 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 455 290 131 28 chr18 45368524 45368738 -40620196 - MIR SINE MIR 0 262 27 2410 91 0 3 chr18 45368938 45369245 -40619689 - AluSg SINE Alu -3 307 2 2900 285 79 24 chr18 45369289 45370718 -40618216 - L1MEc LINE L1 -4829 1567 60 2713 293 134 26 chr18 45370730 45371030 -40617904 - L2 LINE L2 -965 2349 2083 2317 97 0 3 chr18 45371030 45371339 -40617595 + AluSg SINE Alu 1 308 -2 2713 293 134 26 chr18 45371339 45372265 -40616669 - L2 LINE L2 -1231 2083 990 203 196 0 43 chr18 45372307 45372353 -40616581 - MIR SINE MIR -36 226 183 * 212 378 0 0 chr18 45372351 45372441 -40616493 - L2 LINE L2 -2347 967 878 499 179 271 26 chr18 45372466 45372617 -40616317 - MER5A DNA MER1_type -1 188 1 23 33 0 0 chr18 45373089 45373119 -40615815 + AT_rich Low_complexity Low_complexity 1 30 0 783 214 52 33 chr18 45373452 45373662 -40615272 + MER58A DNA MER1_type 8 221 -3 209 244 0 0 chr18 45374079 45374120 -40614814 - L2 LINE L2 -17 3296 3256 428 279 27 18 chr18 45374478 45374589 -40614345 - L2 LINE L2 -1 3271 3160 457 274 97 8 chr18 45374989 45375113 -40613821 - MIR3 SINE MIR -9 199 65 578 354 9 9 chr18 45375910 45376136 -40612798 + MIR SINE MIR 36 261 -1 2361 152 28 30 chr18 45377147 45377574 -40611360 + MSTB LTR MaLR 1 426 0 6175 211 57 45 chr18 45377574 45379136 -40609798 + MSTB-int LTR MaLR 1 1580 0 2088 184 56 19 chr18 45379136 45379549 -40609385 + MSTA LTR MaLR 1 428 0 593 300 143 24 chr18 45379682 45380207 -40608727 + L2 LINE L2 2707 3269 -44 23 0 0 0 chr18 45380229 45380252 -40608682 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr18 45380269 45380291 -40608643 + AT_rich Low_complexity Low_complexity 1 22 0 1768 196 11 14 chr18 45380506 45380869 -40608065 - MLT1A1 LTR MaLR 0 365 4 255 152 65 0 chr18 45380968 45381014 -40607920 - U6 snRNA snRNA -58 49 1 234 339 18 0 chr18 45381320 45381376 -40607558 + L2 LINE L2 3205 3261 -11 396 0 0 0 chr18 45382234 45382278 -40606656 + (TG)n Simple_repeat Simple_repeat 2 45 0 204 97 0 0 chr18 45382531 45382562 -40606372 + (ATG)n Simple_repeat Simple_repeat 2 32 0 1516 189 0 25 chr18 45382780 45383055 -40605879 + AluJo SINE Alu 1 268 -44 180 0 0 0 chr18 45383120 45383140 -40605794 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 290 70 23 0 chr18 45384283 45384326 -40604608 + MADE1 DNA Mariner 3 46 -34 195 42 0 0 chr18 45384374 45384398 -40604536 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 295 392 80 5 chr18 45384935 45385134 -40603800 + L2 LINE L2 2514 2727 -587 21 0 0 0 chr18 45385149 45385170 -40603764 + AT_rich Low_complexity Low_complexity 1 21 0 2069 109 0 16 chr18 45385205 45385508 -40603426 - AluSc SINE Alu -11 298 1 1472 213 54 20 chr18 45387333 45387686 -40601248 + MLT1A1 LTR MaLR 1 365 0 327 125 42 0 chr18 45387755 45387827 -40601107 + (TA)n Simple_repeat Simple_repeat 2 76 0 315 311 16 0 chr18 45387877 45387999 -40600935 + (CATATA)n Simple_repeat Simple_repeat 2 125 0 220 274 0 0 chr18 45388068 45388130 -40600804 + (CTA)n Simple_repeat Simple_repeat 1 62 0 308 358 56 0 chr18 45389102 45389264 -40599670 - MIR3 SINE MIR -2 206 36 228 301 7 7 chr18 45389689 45389825 -40599109 + (TA)n Simple_repeat Simple_repeat 2 137 0 1541 195 0 34 chr18 45390766 45391063 -40597871 - AluJo SINE Alu -25 287 1 555 158 0 0 chr18 45391518 45391613 -40597321 - AluSg/x SINE Alu -20 289 195 508 291 45 22 chr18 45391755 45391978 -40596956 - MIR SINE MIR -1 261 34 261 57 0 0 chr18 45392492 45392527 -40596407 + (CA)n Simple_repeat Simple_repeat 1 35 0 722 238 35 30 chr18 45392637 45392868 -40596066 - MER106A DNA MER1_type -4 232 1 23 33 0 0 chr18 45393079 45393109 -40595825 + AT_rich Low_complexity Low_complexity 1 30 0 190 273 39 70 chr18 45393937 45394065 -40594869 - L2 LINE L2 -48 3265 3142 707 242 227 7 chr18 45394090 45394367 -40594567 - MER58B DNA MER1_type 0 341 4 1772 146 38 14 chr18 45394468 45394755 -40594179 - AluJb SINE Alu -18 294 1 238 333 14 0 chr18 45394761 45394830 -40594104 - L2 LINE L2 -239 3074 3005 7595 161 30 43 chr18 45395018 45395618 -40593316 - L1 LINE L1 -922 5224 4618 1778 118 29 15 chr18 45395618 45395890 -40593044 + AluY SINE Alu 1 276 -35 7595 161 30 43 chr18 45395890 45396930 -40592004 - L1 LINE L1 -1528 4618 3605 311 281 18 102 chr18 45397390 45397557 -40591377 - MIR SINE MIR -21 241 89 1912 195 25 76 chr18 45397670 45398145 -40590789 + L1ME1 LINE L1 3763 4208 -1938 1758 181 7 0 chr18 45398145 45398455 -40590479 - AluSx SINE Alu 0 312 1 1912 195 25 76 chr18 45398455 45398533 -40590401 + L1ME1 LINE L1 4208 4288 -1858 1747 256 36 15 chr18 45398609 45399086 -40589848 + L1ME1 LINE L1 5675 6161 -5 293 367 112 6 chr18 45399829 45399998 -40588936 - MIR3 SINE MIR -2 206 20 191 327 121 61 chr18 45400978 45401143 -40587791 - MIR3 SINE MIR -15 193 19 296 361 0 16 chr18 45401361 45401483 -40587451 + MIR SINE MIR 30 149 -113 26 0 0 0 chr18 45401562 45401588 -40587346 + AT_rich Low_complexity Low_complexity 1 26 0 274 217 14 0 chr18 45402050 45402119 -40586815 + L1M4 LINE L1 2903 2972 -3174 198 188 43 58 chr18 45402255 45402324 -40586610 - L2 LINE L2 -1 3312 3245 388 304 77 42 chr18 45402398 45402492 -40586442 + L1M4 LINE L1 3083 3172 -2974 647 174 14 58 chr18 45402492 45402630 -40586304 + FLAM_C SINE Alu 1 132 -1 388 304 77 42 chr18 45402630 45402821 -40586113 + L1M4 LINE L1 3172 3378 -2768 368 250 45 36 chr18 45403436 45403548 -40585386 - MLT1H LTR MaLR -217 332 220 22 0 0 0 chr18 45403726 45403748 -40585186 + AT_rich Low_complexity Low_complexity 1 22 0 309 109 0 0 chr18 45404282 45404337 -40584597 + (T)n Simple_repeat Simple_repeat 1 55 0 2009 85 0 36 chr18 45404919 45405200 -40583734 - AluSp SINE Alu -6 307 37 1793 151 16 30 chr18 45407013 45407317 -40581617 + AluSx SINE Alu 1 300 -12 3848 198 41 1 chr18 45408235 45408861 -40580073 + L1MC2 LINE L1 5319 5985 -359 297 0 0 0 chr18 45408861 45408894 -40580040 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 3848 198 41 1 chr18 45408894 45409067 -40579867 + L1MC2 LINE L1 5985 6150 -194 38077 91 6 14 chr18 45409078 45415473 -40573461 + L1PA6 LINE L1 11 6160 0 4688 153 43 36 chr18 45415475 45416304 -40572630 - L1PA16 LINE L1 -9 6157 5319 6521 69 40 0 chr18 45416304 45417290 -40571644 - L1PA7 LINE L1 -13 6141 5142 4688 153 43 36 chr18 45417290 45417375 -40571559 - L1PA16 LINE L1 -847 5319 5236 576 234 117 0 chr18 45417375 45417520 -40571414 + L1ME1 LINE L1 4705 4866 -1280 2243 258 63 8 chr18 45417545 45418511 -40570423 + L1ME1 LINE L1 5019 6037 -129 310 315 89 7 chr18 45418794 45418946 -40569988 - MIR3 SINE MIR -34 174 10 626 351 155 40 chr18 45420094 45420976 -40567958 + L3 LINE CR1 297 1280 -297 330 150 0 67 chr18 45421271 45421331 -40567603 + MLT1L LTR MaLR 151 206 -409 2427 44 0 3 chr18 45421358 45421653 -40567281 + AluY SINE Alu 1 294 -17 861 148 137 0 chr18 45421653 45421835 -40567099 + L1MC3 LINE L1 7564 7770 -15 279 0 0 0 chr18 45423164 45423195 -40565739 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 429 54 0 0 chr18 45423441 45423497 -40565437 + (CA)n Simple_repeat Simple_repeat 2 57 0 1066 264 58 34 chr18 45425769 45426704 -40562230 + L1M2 LINE L1 2732 3718 -3847 2414 63 0 0 chr18 45426704 45427004 -40561930 + AluY SINE Alu 1 300 -11 1066 264 58 34 chr18 45427004 45427119 -40561815 + L1M2 LINE L1 3718 3829 -3736 10173 220 56 23 chr18 45427330 45429990 -40558944 + L1M2 LINE L1 3838 6629 -1102 2977 171 25 74 chr18 45429990 45430717 -40558217 - LTR8 LTR ERV1 0 691 1 10173 220 56 23 chr18 45430717 45431306 -40557628 + L1M2 LINE L1 6629 7197 -534 338 0 0 23 chr18 45431444 45431487 -40557447 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 22 0 0 0 chr18 45431592 45431614 -40557320 + AT_rich Low_complexity Low_complexity 1 22 0 183 226 75 0 chr18 45431985 45432038 -40556896 + L2 LINE L2 2425 2481 -833 716 222 101 2 chr18 45432643 45432897 -40556037 + MER110A LTR ERV1 1 337 -131 599 208 146 0 chr18 45432909 45433039 -40555895 + FAM SINE Alu 18 166 -19 344 305 43 7 chr18 45433063 45433204 -40555730 + MER110A LTR ERV1 323 468 0 2211 105 17 0 chr18 45433421 45433717 -40555217 - AluSg SINE Alu -9 301 1 1997 152 100 12 chr18 45433852 45434273 -40554661 - LOR1b LTR ERV1 0 461 4 325 274 197 40 chr18 45434606 45435033 -40553901 - L1ME4a LINE L1 -102 6088 5595 557 279 104 65 chr18 45435198 45435889 -40553045 - L1ME4a LINE L1 -812 5403 4686 237 247 54 43 chr18 45436052 45436145 -40552789 - LTR67 LTR ERVL -7 550 457 691 308 83 16 chr18 45436397 45436784 -40552150 - L1ME3A LINE L1 -76 6094 5682 236 282 26 17 chr18 45436805 45436922 -40552012 - L1ME4a LINE L1 -4994 1402 1285 333 280 95 6 chr18 45437190 45437358 -40551576 - L1MEc LINE L1 -3383 2832 2650 453 266 144 63 chr18 45437363 45437468 -40551466 - L1MEc LINE L1 -3613 2602 2507 1828 149 16 43 chr18 45437468 45437790 -40551144 - AluSq SINE Alu 0 313 1 942 115 6 19 chr18 45437797 45437954 -40550980 - L1PA13 LINE L1 -2 6161 6007 453 266 144 63 chr18 45437954 45438223 -40550711 - L1MEc LINE L1 -3713 2502 2189 315 0 0 0 chr18 45438456 45438491 -40550443 + (TG)n Simple_repeat Simple_repeat 2 36 0 1867 240 176 24 chr18 45439103 45440337 -40548597 - L1MC4 LINE L1 0 8042 6445 331 274 88 27 chr18 45440592 45440991 -40547943 - L1MEc LINE L1 -4505 1750 1330 725 237 64 96 chr18 45441002 45441407 -40547527 - L1ME LINE L1 -517 5714 5323 479 267 83 43 chr18 45441442 45441862 -40547072 - L1ME LINE L1 -1481 4734 4298 189 0 0 0 chr18 45441902 45441923 -40547011 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 3376 203 72 10 chr18 45441938 45442707 -40546227 - L1PB4 LINE L1 -5 6151 5336 2524 222 20 20 chr18 45442708 45442935 -40545999 + L1P LINE L1 3111 3337 -2809 1976 151 0 31 chr18 45442935 45443253 -40545681 + AluSx SINE Alu 1 308 -4 2524 222 20 20 chr18 45443253 45443713 -40545221 + L1P LINE L1 3336 3798 -2348 434 329 93 29 chr18 45443749 45444031 -40544903 - L1ME LINE L1 -2065 4150 3850 21 0 0 0 chr18 45444120 45444141 -40544793 + AT_rich Low_complexity Low_complexity 1 21 0 1861 135 6 66 chr18 45444187 45444505 -40544429 - AluSx SINE Alu -13 299 1 319 342 89 30 chr18 45444996 45445233 -40543701 - L1ME LINE L1 -4578 1818 1568 21 0 0 0 chr18 45445700 45445721 -40543213 + AT_rich Low_complexity Low_complexity 1 21 0 4447 71 3 3 chr18 45445791 45446381 -40542553 - L1PA5 LINE L1 0 6154 5565 28046 41 43 2 chr18 45446381 45449928 -40539006 - L1P LINE L1 -2452 3694 1 259 298 73 24 chr18 45451492 45451616 -40537318 + MIR SINE MIR 123 252 -10 210 374 11 0 chr18 45451627 45451718 -40537216 + L2 LINE L2 3222 3313 0 546 165 0 0 chr18 45452112 45452203 -40536731 + MSTA LTR MaLR 338 428 0 4301 159 19 35 chr18 45452267 45453063 -40535871 - THE1-int LTR MaLR -66 1514 732 3898 199 38 3 chr18 45453358 45454115 -40534819 - MSTA-int LTR MaLR -867 784 1 1946 153 138 5 chr18 45454115 45454493 -40534441 - MSTA LTR MaLR 0 428 1 214 374 66 0 chr18 45454890 45454981 -40533953 + MIR SINE MIR 41 137 -71 1440 300 69 22 chr18 45455138 45456119 -40532815 + L1M1 LINE L1 2592 3618 -3947 2469 238 66 11 chr18 45456138 45456858 -40532076 + L1M1 LINE L1 3741 4511 -3054 1950 125 3 46 chr18 45456858 45457003 -40531931 + AluSg SINE Alu 1 128 -182 221 57 29 0 chr18 45457003 45457038 -40531896 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 1950 125 3 46 chr18 45457038 45457197 -40531737 + AluSg SINE Alu 128 292 -18 2469 238 66 11 chr18 45457197 45457274 -40531660 + L1M1 LINE L1 4511 4582 -2983 323 351 40 20 chr18 45457336 45457635 -40531299 - LTR16B LTR ERVL -17 447 143 230 322 70 49 chr18 45458058 45458201 -40530733 - MIR3 SINE MIR -32 176 31 2433 64 0 16 chr18 45459966 45460278 -40528656 + AluY SINE Alu 1 307 -4 244 278 157 37 chr18 45461109 45461217 -40527717 + MIR3 SINE MIR 77 197 -11 327 281 52 0 chr18 45468112 45468208 -40520726 + MIR SINE MIR 90 190 -72 565 306 62 25 chr18 45468434 45468676 -40520258 - MLT1F1 LTR MaLR -4 563 313 347 296 28 19 chr18 45469660 45469768 -40519166 + MER5B DNA MER1_type 66 174 -4 212 346 52 80 chr18 45470332 45470621 -40518313 - L2 LINE L2 -12 3260 2980 403 198 22 44 chr18 45470704 45470795 -40518139 - MER81 DNA DNA 0 114 26 1752 142 6 68 chr18 45471016 45471339 -40517595 - AluSx SINE Alu -9 303 1 2049 120 7 10 chr18 45522649 45522949 -40465985 - AluSx SINE Alu -13 299 1 25 0 0 0 chr18 45523055 45523080 -40465854 + AT_rich Low_complexity Low_complexity 1 25 0 24 53 0 0 chr18 45523742 45523780 -40465154 + AT_rich Low_complexity Low_complexity 1 38 0 1190 337 98 11 chr18 45524562 45525374 -40463560 + ERVL LTR ERVL 1929 2811 -2953 265 393 7 0 chr18 45525692 45525832 -40463102 + ERVL LTR ERVL 3196 3336 -2428 3639 245 52 7 chr18 45525857 45527026 -40461908 - Charlie1a DNA MER1_type -22 1433 212 2302 176 29 5 chr18 45527026 45527440 -40461494 + MSTB LTR MaLR 1 424 -2 374 216 64 32 chr18 45527441 45527559 -40461375 - Charlie1a DNA MER1_type -1239 216 95 1378 214 17 46 chr18 45527559 45527909 -40461025 - MLT1A1 LTR MaLR 0 365 26 231 196 22 0 chr18 45527917 45527963 -40460971 - Charlie1a DNA MER1_type -1353 102 56 311 322 87 45 chr18 45528535 45528914 -40460020 + ERVL LTR ERVL 3604 3998 -1656 808 276 62 49 chr18 45529105 45529262 -40459672 + ERVL LTR ERVL 4303 4456 -1308 2214 141 0 0 chr18 45529262 45529574 -40459360 + AluSx SINE Alu 1 312 0 808 276 62 49 chr18 45529574 45529786 -40459148 + ERVL LTR ERVL 4456 4677 -1087 455 322 105 4 chr18 45529860 45530118 -40458816 + ERVL LTR ERVL 4797 5080 -684 7251 184 63 15 chr18 45530206 45531779 -40457155 - MER52A LTR ERV1 0 1755 1 287 336 32 8 chr18 45531847 45531972 -40456962 - HERVL LTR ERVL -1945 3709 3582 275 270 15 7 chr18 45532355 45532492 -40456442 + (TA)n Simple_repeat Simple_repeat 2 139 0 457 102 10 51 chr18 45532492 45532590 -40456344 - MER52A LTR ERV1 -834 921 828 362 209 0 0 chr18 45532587 45532654 -40456280 - MER52A LTR ERV1 -285 1470 1404 * 2139 125 7 0 chr18 45532714 45533003 -40455931 + AluSq SINE Alu 1 291 -22 446 161 11 0 chr18 45533004 45533097 -40455837 + (TA)n Simple_repeat Simple_repeat 1 94 0 211 293 30 81 chr18 45533344 45533443 -40455491 - MER5A DNA MER1_type -38 151 58 312 313 37 30 chr18 45534464 45534598 -40454336 - MIR3 SINE MIR 0 208 74 341 304 75 59 chr18 45535905 45536019 -40452915 - MARNA DNA Mariner -51 535 424 2104 122 17 0 chr18 45536019 45536307 -40452627 + AluSg SINE Alu 1 293 -17 341 304 75 59 chr18 45536307 45536550 -40452384 - MARNA DNA Mariner -162 424 172 187 277 0 0 chr18 45538105 45538152 -40450782 - MIR SINE MIR -146 116 70 193 176 0 0 chr18 45538380 45538414 -40450520 - MIR SINE MIR -10 252 219 206 121 0 0 chr18 45538758 45538791 -40450143 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 551 71 30 20 chr18 45538966 45539065 -40449869 + (TTCC)n Simple_repeat Simple_repeat 1 100 0 1330 202 3 38 chr18 45539065 45539357 -40449577 - AluJo SINE Alu -1 311 30 23 54 0 0 chr18 45539988 45540025 -40448909 + AT_rich Low_complexity Low_complexity 1 37 0 333 0 0 0 chr18 45540163 45540200 -40448734 + (TG)n Simple_repeat Simple_repeat 2 38 0 296 349 13 7 chr18 45540713 45540862 -40448072 - L1ME LINE L1 -551 5611 5461 833 158 0 0 chr18 45541604 45541724 -40447210 + 5S rRNA rRNA 1 120 -1 758 227 0 0 chr18 45541921 45542062 -40446872 + FRAM SINE Alu 1 140 -36 23 68 0 0 chr18 45542065 45542109 -40446825 + AT_rich Low_complexity Low_complexity 1 44 0 370 336 0 0 chr18 45542873 45542977 -40445957 + MIR3 SINE MIR 92 195 -13 1140 146 58 11 chr18 45543228 45543559 -40445375 + Tigger1 DNA MER2_type 26 2418 0 296 286 140 52 chr18 45544088 45544931 -40444003 + L1M4 LINE L1 4487 5403 -743 2408 237 58 24 chr18 45544997 45545506 -40443428 + L1MC4a LINE L1 6163 6154 -205 255 31 0 0 chr18 45545506 45545538 -40443396 + (CA)n Simple_repeat Simple_repeat 2 33 0 2408 237 58 24 chr18 45545538 45545753 -40443181 + L1MC4a LINE L1 6153 6359 0 399 300 67 0 chr18 45546249 45546369 -40442565 + MER58A DNA MER1_type 1 128 0 269 173 0 19 chr18 45546369 45546414 -40442520 + MER58A DNA MER1_type 181 224 0 2617 204 35 35 chr18 45546577 45547199 -40441735 - MLT1E3 LTR MaLR 0 624 3 26 50 0 0 chr18 45548235 45548275 -40440659 + AT_rich Low_complexity Low_complexity 1 40 0 242 111 0 0 chr18 45548365 45548410 -40440524 - LTR66 LTR ERVL -171 439 395 488 152 95 48 chr18 45548437 45548542 -40440392 - Tigger7 DNA MER2_type -1 2486 2377 567 108 0 77 chr18 45548545 45548740 -40440194 + (TA)n Simple_repeat Simple_repeat 1 180 0 307 82 15 103 chr18 45548757 45548952 -40439982 + (TA)n Simple_repeat Simple_repeat 1 178 0 424 55 5 109 chr18 45548980 45549181 -40439753 + (TA)n Simple_repeat Simple_repeat 1 180 0 201 175 79 16 chr18 45549184 45549247 -40439687 + (TATAG)n Simple_repeat Simple_repeat 4 70 0 369 83 55 66 chr18 45549247 45549428 -40439506 + (CTATA)n Simple_repeat Simple_repeat 2 180 0 533 277 76 56 chr18 45549629 45549932 -40439002 - MLT1J LTR MaLR -202 309 1 6172 201 25 60 chr18 45550835 45552445 -40436489 + L1MCa LINE L1 34 1587 -4839 325 104 91 26 chr18 45552450 45552527 -40436407 - L1MCa LINE L1 -4422 2004 1923 5548 232 34 44 chr18 45552550 45555006 -40433928 + L1MCa LINE L1 2057 4486 -1940 1146 140 0 11 chr18 45555007 45555185 -40433749 + AluSg/x SINE Alu 137 312 0 579 255 59 31 chr18 45555185 45555475 -40433459 + L1MCa LINE L1 4462 4759 -1667 1079 264 18 18 chr18 45555580 45555910 -40433024 + L1MC1 LINE L1 3877 4206 -1940 1081 156 0 17 chr18 45555911 45556090 -40432844 + AluSg/x SINE Alu 137 312 0 4222 223 45 32 chr18 45556090 45558206 -40430728 + L1MC1 LINE L1 4184 6313 -20 736 281 25 10 chr18 45558620 45558816 -40430118 + MIR SINE MIR 37 235 -27 1574 253 17 67 chr18 45559688 45560225 -40428709 - MLT2B1 LTR ERVL -8 512 3 26 0 0 0 chr18 45560257 45560283 -40428651 + AT_rich Low_complexity Low_complexity 1 26 0 750 236 15 0 chr18 45560615 45560810 -40428124 + L1 LINE L1 4225 4422 -1724 263 202 48 12 chr18 45560817 45560901 -40428033 + (TATG)n Simple_repeat Simple_repeat 2 88 0 364 290 31 18 chr18 45561004 45561385 -40427549 + L1MEc LINE L1 2023 2395 -3820 1170 252 4 4 chr18 45561402 45561644 -40427290 + Tigger7 DNA MER2_type 1 242 -463 1471 280 115 55 chr18 45561974 45562187 -40426747 - L1ME LINE L1 -1519 4561 4362 1517 49 0 0 chr18 45562187 45562372 -40426562 - L1PA5 LINE L1 -6 6148 5964 1471 280 115 55 chr18 45562372 45563385 -40425549 - L1ME LINE L1 -1718 4362 3229 1529 89 47 0 chr18 45563385 45563620 -40425314 + L1PB1 LINE L1 5904 6149 -2 1471 280 115 55 chr18 45563620 45563858 -40425076 - L1ME LINE L1 -2851 3229 3007 * 2615 182 52 1 chr18 45563853 45564389 -40424545 - L1PA16 LINE L1 -4 7588 7007 10831 246 86 68 chr18 45564396 45565446 -40423488 - L1PA16 LINE L1 -1008 6576 5546 2312 90 7 0 chr18 45565446 45565745 -40423189 + AluSp SINE Alu 1 301 -12 10831 246 86 68 chr18 45565745 45565929 -40423005 - L1PA16 LINE L1 -2038 5546 5367 5389 52 34 0 chr18 45565929 45566627 -40422307 + LTR30 LTR ERV1 1 722 0 10831 246 86 68 chr18 45566627 45570697 -40418237 - L1PA16 LINE L1 -2217 5367 1370 2258 144 5 19 chr18 45570697 45571066 -40417868 + THE1B LTR MaLR 1 364 0 10831 246 86 68 chr18 45571066 45571640 -40417294 - L1PA16 LINE L1 -6214 1370 808 434 103 0 0 chr18 45571640 45571698 -40417236 - THE1B LTR MaLR -67 297 240 10831 246 86 68 chr18 45571698 45572102 -40416832 - L1PA16 LINE L1 -6776 808 8 526 244 159 7 chr18 45572104 45572375 -40416559 - L1ME LINE L1 -3051 3029 2718 7849 144 53 35 chr18 45572375 45573816 -40415118 + Tigger2 DNA MER2_type 1 1468 -1250 759 210 123 87 chr18 45573817 45574117 -40414817 - MER66A LTR ERV1 -141 337 27 3768 139 6 39 chr18 45574125 45574764 -40414170 - MER66A-int LTR ERV1 0 6676 6059 8100 181 36 21 chr18 45574921 45576475 -40412459 - MER66A-int LTR ERV1 -3878 2798 1221 651 258 20 0 chr18 45576574 45576725 -40412209 - MER66A-int LTR ERV1 -3573 3103 2950 1551 175 131 56 chr18 45576818 45577247 -40411687 - MER66A-int LTR ERV1 -5562 1114 654 3721 82 12 0 chr18 45577248 45577760 -40411174 - L1P LINE L1 -1500 4646 4129 1934 72 0 0 chr18 45577760 45578033 -40410901 + L1PA7 LINE L1 5890 6166 0 2254 215 67 70 chr18 45578033 45578688 -40410246 - MER66A-int LTR ERV1 -6023 653 1 1077 236 9 31 chr18 45578700 45579042 -40409892 - MER66A LTR ERV1 -39 447 27 5611 172 51 21 chr18 45579050 45580154 -40408780 + Tigger2 DNA MER2_type 1582 2718 0 903 185 35 91 chr18 45580190 45580444 -40408490 + MLT2D LTR ERVL 85 324 -90 239 130 0 22 chr18 45580517 45580563 -40408371 + (CATA)n Simple_repeat Simple_repeat 4 48 0 2056 144 39 28 chr18 45580566 45580926 -40408008 - THE1B LTR MaLR 0 364 1 280 150 0 67 chr18 45580927 45580987 -40407947 + MLT2D LTR ERVL 465 520 0 658 227 121 40 chr18 45580999 45581197 -40407737 - MER20 DNA MER1_type -4 215 2 583 294 7 47 chr18 45581226 45581522 -40407412 - L1ME LINE L1 -3391 2689 2406 312 297 47 0 chr18 45581565 45581693 -40407241 - L1MEc LINE L1 -4295 2101 1968 424 237 103 82 chr18 45581862 45582113 -40406821 - L1ME LINE L1 -3696 2384 2161 216 67 0 0 chr18 45582113 45582143 -40406791 + (TG)n Simple_repeat Simple_repeat 2 31 0 424 237 103 82 chr18 45582143 45582392 -40406542 - L1ME LINE L1 -3919 2161 1919 1415 294 75 55 chr18 45582825 45583983 -40404951 - L1ME LINE L1 -4295 1966 833 1936 140 0 3 chr18 45583983 45584269 -40404665 + AluSx SINE Alu 1 285 -27 248 0 31 0 chr18 45584269 45584301 -40404633 + (CA)n Simple_repeat Simple_repeat 2 34 0 1415 294 75 55 chr18 45584301 45584950 -40403984 - L1ME LINE L1 -5428 833 83 300 111 0 0 chr18 45584950 45584995 -40403939 + (TG)n Simple_repeat Simple_repeat 2 46 0 1415 294 75 55 chr18 45584995 45585028 -40403906 - L1ME LINE L1 -6178 83 52 210 238 0 0 chr18 45585289 45585331 -40403603 + CT-rich Low_complexity Low_complexity 3 44 0 3715 184 48 22 chr18 45586323 45587283 -40401651 + L1MB4 LINE L1 5096 6077 -103 197 65 32 0 chr18 45587894 45587925 -40401009 + (GAAA)n Simple_repeat Simple_repeat 4 35 0 225 253 12 48 chr18 45587983 45588066 -40400868 + MLT1K LTR MaLR 492 571 -17 581 254 8 0 chr18 45589349 45589471 -40399463 - FLAM_A SINE Alu -10 123 1 500 58 0 0 chr18 45590119 45590188 -40398746 + MER41B LTR ERV1 481 549 -86 186 43 0 0 chr18 45590188 45590211 -40398723 + (A)n Simple_repeat Simple_repeat 1 23 0 203 372 47 0 chr18 45590607 45590736 -40398198 - L2 LINE L2 0 3313 3179 332 343 153 37 chr18 45590841 45591359 -40397575 - L2 LINE L2 -222 3050 2463 209 205 0 0 chr18 45591616 45591655 -40397279 + (CATA)n Simple_repeat Simple_repeat 2 40 0 1915 149 0 0 chr18 45592562 45592884 -40396050 + AluSx SINE Alu 1 322 0 398 78 0 0 chr18 45592987 45593038 -40395896 + Alu SINE Alu 231 281 -20 186 43 0 0 chr18 45593038 45593061 -40395873 + (TC)n Simple_repeat Simple_repeat 2 24 0 1166 291 109 33 chr18 45593199 45593797 -40395137 - MLT2F LTR ERVL -12 651 9 1316 210 15 74 chr18 45594662 45595053 -40393881 + MLT1A2 LTR MaLR 3 370 -4 637 276 73 0 chr18 45595056 45595248 -40393686 - MIR SINE MIR -3 259 54 1720 167 0 4 chr18 45595499 45595769 -40393165 + AluJb SINE Alu 7 275 -37 240 320 0 0 chr18 45595996 45596074 -40392860 + MLT1L LTR MaLR 2 79 -536 1622 175 10 19 chr18 45596275 45596583 -40392351 - AluJb SINE Alu -7 305 1 280 293 85 0 chr18 45598105 45598187 -40390747 - L2 LINE L2 -16 3256 3168 2350 77 0 0 chr18 45598281 45598578 -40390356 + AluY SINE Alu 1 297 -14 270 287 118 29 chr18 45598981 45599117 -40389817 - MIR SINE MIR -24 238 91 217 228 250 0 chr18 45600342 45600434 -40388500 + MIR SINE MIR 147 261 -1 273 318 11 0 chr18 45600851 45600939 -40387995 + MIR SINE MIR 65 153 -109 358 340 80 11 chr18 45603563 45603740 -40385194 + L1ME LINE L1 4945 5147 -999 2107 116 6 10 chr18 45603740 45604051 -40384883 + AluSq SINE Alu 1 310 -3 358 340 80 11 chr18 45604051 45604135 -40384799 + L1ME LINE L1 5147 5224 -922 29 0 0 0 chr18 45604292 45604321 -40384613 + AT_rich Low_complexity Low_complexity 1 29 0 216 209 0 0 chr18 45604420 45604463 -40384471 + (TA)n Simple_repeat Simple_repeat 1 43 0 21 36 0 0 chr18 45604684 45604712 -40384222 + AT_rich Low_complexity Low_complexity 1 28 0 271 289 63 57 chr18 45604728 45604887 -40384047 + L1ME LINE L1 5435 5594 -527 27 0 0 0 chr18 45605044 45605071 -40383863 + AT_rich Low_complexity Low_complexity 1 27 0 284 212 30 50 chr18 45605075 45605174 -40383760 - MER103 DNA DNA -3 163 67 233 302 0 0 chr18 45606335 45606398 -40382536 + GA-rich Low_complexity Low_complexity 4 66 0 3728 115 42 29 chr18 45606454 45606540 -40382394 + MER41B LTR ERV1 1 84 -551 1732 109 4 15 chr18 45606540 45606805 -40382129 - AluY SINE Alu -32 279 18 3728 115 42 29 chr18 45606805 45607345 -40381589 + MER41B LTR ERV1 84 635 0 371 329 20 20 chr18 45607547 45607696 -40381238 + MIR3 SINE MIR 40 188 -20 1504 264 42 65 chr18 45608077 45608649 -40380285 + L1MCb LINE L1 3 561 -5484 1912 227 19 26 chr18 45608807 45609274 -40379660 + L1MCb LINE L1 615 1078 -4967 366 218 56 35 chr18 45609280 45609422 -40379512 - MER5C DNA MER1_type 0 324 180 1152 246 23 14 chr18 45609426 45609775 -40379159 + L1MCb LINE L1 1066 1417 -5147 * 2321 247 106 24 chr18 45609763 45611503 -40377431 + L1MCb LINE L1 1821 3705 -2859 210 333 0 33 chr18 45611529 45611619 -40377315 - MIR SINE MIR -76 186 100 322 259 89 30 chr18 45611696 45611831 -40377103 - MLT1L LTR MaLR 0 615 473 365 123 4 0 chr18 45611894 45611960 -40376974 - MSTD LTR MaLR -8 388 339 2022 133 7 3 chr18 45612177 45612471 -40376463 - AluSx SINE Alu -17 295 1 1512 233 25 25 chr18 45612905 45613270 -40375664 + MLT1A1 LTR MaLR 1 365 0 209 279 25 13 chr18 45614105 45614184 -40374750 + (TA)n Simple_repeat Simple_repeat 2 81 0 334 304 57 25 chr18 45614187 45614345 -40374589 - MER117 DNA MER1_type -26 171 9 714 260 148 9 chr18 45614460 45614683 -40374251 - MIR SINE MIR -2 260 7 2072 121 0 0 chr18 45615639 45615929 -40373005 + AluSx SINE Alu 22 311 -1 3470 266 112 45 chr18 45615960 45616259 -40372675 + L1MEc LINE L1 44 321 -6075 1945 194 70 8 chr18 45616259 45616660 -40372274 - MSTB LTR MaLR 0 426 1 3470 266 112 45 chr18 45616660 45618504 -40370430 + L1MEc LINE L1 321 2331 -4065 904 219 1 3 chr18 45618516 45618764 -40370170 + AluJb SINE Alu 1 281 -31 317 240 49 123 chr18 45618815 45619019 -40369915 + L1ME2 LINE L1 5836 6024 -140 231 300 0 0 chr18 45619424 45619560 -40369374 + (TA)n Simple_repeat Simple_repeat 1 136 0 21 36 0 0 chr18 45621674 45621702 -40367232 + AT_rich Low_complexity Low_complexity 1 28 0 330 26 0 0 chr18 45622024 45622063 -40366871 + (TA)n Simple_repeat Simple_repeat 2 40 0 330 289 42 54 chr18 45622525 45622594 -40366340 + HAL1 LINE L1 1145 1213 -1294 2439 169 26 0 chr18 45622594 45623009 -40365925 - MSTB LTR MaLR 0 426 1 330 289 42 54 chr18 45623009 45623105 -40365829 + HAL1 LINE L1 1213 1308 -1199 26 0 0 0 chr18 45623678 45623704 -40365230 + AT_rich Low_complexity Low_complexity 1 26 0 559 246 23 8 chr18 45624622 45624752 -40364182 + MER45A DNA AcHobo 33 164 -14 182 365 73 21 chr18 45625155 45625251 -40363683 + L2 LINE L2 3153 3253 -19 297 0 0 0 chr18 45625532 45625565 -40363369 + (TG)n Simple_repeat Simple_repeat 1 33 0 720 246 6 6 chr18 45626205 45626376 -40362558 + MER5B DNA MER1_type 4 174 -4 2191 136 21 21 chr18 45626817 45627192 -40361742 + THE1C LTR MaLR 1 375 0 642 143 0 0 chr18 45627709 45627807 -40361127 + AluSp SINE Alu 185 282 -31 201 39 0 0 chr18 45627812 45627838 -40361096 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 275 292 158 29 chr18 45628358 45628529 -40360405 - MIR SINE MIR -7 255 63 23 54 0 0 chr18 45628682 45628719 -40360215 + AT_rich Low_complexity Low_complexity 1 37 0 473 200 5 168 chr18 45628846 45629066 -40359868 + MER110A LTR ERV1 70 253 -215 2203 88 3 3 chr18 45629227 45629521 -40359413 - AluSq SINE Alu -7 306 13 26 0 0 0 chr18 45629804 45629830 -40359104 + AT_rich Low_complexity Low_complexity 1 26 0 455 210 185 25 chr18 45629835 45629992 -40358942 - MER110A LTR ERV1 -3 465 284 368 312 0 0 chr18 45631781 45631890 -40357044 + L2 LINE L2 2892 3000 -313 20977 81 17 2 chr18 45631955 45635697 -40353237 - L1PA6 LINE L1 0 6154 2380 645 305 79 29 chr18 45635697 45636012 -40352922 + L2 LINE L2 2981 3311 -2 241 188 27 25 chr18 45636285 45636364 -40352570 + L1P5 LINE L1 5341 5432 -692 313 266 43 77 chr18 45636467 45636642 -40352292 + L1ME LINE L1 5632 5801 -320 286 349 103 30 chr18 45638055 45638287 -40350647 - MLT1K LTR MaLR -5 583 335 1552 102 4 21 chr18 45639617 45639853 -40349081 + L1PA8 LINE L1 5935 6166 -6 208 313 73 0 chr18 45640082 45640178 -40348756 - MIR SINE MIR -2 260 158 2302 93 0 16 chr18 45640678 45640991 -40347943 - AluSx SINE Alu -2 310 3 720 208 33 0 chr18 45641655 45641838 -40347096 + MER53 DNA DNA 1 189 0 340 344 8 0 chr18 45643577 45643699 -40345235 + MIR3 SINE MIR 81 203 -5 2216 123 0 0 chr18 45645206 45645515 -40343419 + AluSx SINE Alu 1 309 -3 328 270 79 32 chr18 45645871 45645997 -40342937 + L2 LINE L2 3182 3313 0 427 242 108 25 chr18 45646156 45646313 -40342621 - MIR SINE MIR -36 226 57 476 304 94 0 chr18 45646770 45646908 -40342026 - LTR33 LTR ERVL -366 155 5 25 51 0 0 chr18 45647009 45647048 -40341886 + AT_rich Low_complexity Low_complexity 1 39 0 1458 322 52 58 chr18 45649206 45649898 -40339036 - MER115 DNA AcHobo 0 693 6 2291 57 30 13 chr18 45650708 45651007 -40337927 + AluY SINE Alu 1 304 -7 875 239 125 8 chr18 45651449 45651704 -40337230 + MER110A LTR ERV1 1 286 -182 6010 161 71 17 chr18 45651704 45652871 -40336063 - Tigger3b DNA MER2_type 0 1231 2 21 0 0 0 chr18 45653854 45653875 -40335059 + AT_rich Low_complexity Low_complexity 1 21 0 321 330 40 40 chr18 45654773 45655000 -40333934 - L1MEd LINE L1 -4928 1191 965 1108 178 5 5 chr18 45655094 45655308 -40333626 + L1PA13 LINE L1 5950 6163 0 784 184 0 13 chr18 45655310 45655462 -40333472 - Tigger2 DNA MER2_type -80 2638 2489 28 0 0 0 chr18 45656038 45656066 -40332868 + AT_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr18 45656269 45656308 -40332626 + AT_rich Low_complexity Low_complexity 1 39 0 494 296 28 34 chr18 45656605 45656784 -40332150 - MIR SINE MIR -76 186 9 22 0 0 0 chr18 45658227 45658249 -40330685 + AT_rich Low_complexity Low_complexity 1 22 0 509 286 24 52 chr18 45658627 45658837 -40330097 - MIR SINE MIR -39 223 20 1582 273 29 34 chr18 45659461 45660044 -40328890 - L1ME1 LINE L1 -5 6161 5582 382 334 72 8 chr18 45660119 45660501 -40328433 - L1ME1 LINE L1 -2183 3963 3556 927 229 30 146 chr18 45660688 45661163 -40327771 + MER110 LTR ERV1 80 605 -3 29 0 0 0 chr18 45661537 45661566 -40327368 + AT_rich Low_complexity Low_complexity 1 29 0 209 169 70 0 chr18 45661779 45661850 -40327084 + (TA)n Simple_repeat Simple_repeat 1 76 0 380 274 175 30 chr18 45661976 45662308 -40326626 - L1ME1 LINE L1 -3627 2519 2140 30 27 0 0 chr18 45662517 45662554 -40326380 + AT_rich Low_complexity Low_complexity 1 37 0 350 352 41 15 chr18 45662891 45663087 -40325847 - L1M4 LINE L1 -2289 3857 3657 22 0 0 0 chr18 45663246 45663268 -40325666 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr18 45663331 45663353 -40325581 + AT_rich Low_complexity Low_complexity 1 22 0 689 328 52 10 chr18 45663459 45663843 -40325091 + MLT1L LTR MaLR 137 536 -79 347 282 74 11 chr18 45664369 45664653 -40324281 - L1M4 LINE L1 -3654 2492 2191 664 256 141 0 chr18 45665386 45665577 -40323357 - MER58A DNA MER1_type -6 218 1 1036 279 126 25 chr18 45665995 45666472 -40322462 - MLT1H LTR MaLR -24 525 1 1901 197 50 14 chr18 45667327 45667743 -40321191 - MSTB1 LTR MaLR -1 431 1 784 316 35 60 chr18 45669165 45669713 -40319221 + L1PA16 LINE L1 871 1404 -6170 12260 228 26 39 chr18 45670161 45671055 -40317879 + L1PA16 LINE L1 2185 3090 -4514 2661 46 0 0 chr18 45671055 45671362 -40317572 + AluY SINE Alu 1 307 -4 12260 228 26 39 chr18 45671362 45672488 -40316446 + L1PA16 LINE L1 3090 4230 -3374 2100 124 0 10 chr18 45672488 45672787 -40316147 + AluSx SINE Alu 1 296 -16 12260 228 26 39 chr18 45672787 45676257 -40312677 + L1PA16 LINE L1 4230 7592 -12 225 0 0 0 chr18 45676259 45676284 -40312650 + (T)n Simple_repeat Simple_repeat 1 25 0 350 279 7 0 chr18 45676507 45676643 -40312291 - MER31-int LTR ERV1 -3490 1446 1310 23 54 0 0 chr18 45676665 45676702 -40312232 + AT_rich Low_complexity Low_complexity 1 37 0 31 0 0 0 chr18 45676741 45676772 -40312162 + AT_rich Low_complexity Low_complexity 1 31 0 3951 280 49 13 chr18 45677568 45679062 -40309872 + ERVL-C1 LTR ERVL 335 1968 -3796 4208 203 28 13 chr18 45679062 45679990 -40308944 + ERVL-C1 LTR ERVL 4198 5167 -597 1156 244 16 0 chr18 45679990 45680310 -40308624 - L1PA15 LINE L1 -1616 4530 4206 4879 121 45 40 chr18 45680310 45681156 -40307778 + L1PA15 LINE L1 4534 5394 -771 2360 75 0 34 chr18 45681156 45681478 -40307456 + AluY SINE Alu 1 311 0 4879 121 45 40 chr18 45681478 45682252 -40306682 + L1PA15 LINE L1 5394 6162 -3 1519 201 69 45 chr18 45682254 45682728 -40306206 + ERVL-C1 LTR ERVL 5134 5593 -61 801 251 89 52 chr18 45682758 45683141 -40305793 + MLT2C1 LTR ERVL 1 397 0 252 0 0 0 chr18 45683223 45683251 -40305683 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1545 241 44 44 chr18 45683776 45684279 -40304655 + MLT1D LTR MaLR 3 505 0 252 86 0 0 chr18 45684740 45684775 -40304159 + (TG)n Simple_repeat Simple_repeat 1 35 0 627 248 85 0 chr18 45687239 45687392 -40301542 - MIR SINE MIR -18 244 79 1776 181 3 16 chr18 45687489 45687804 -40301130 + AluJo SINE Alu 1 311 -1 1425 135 150 86 chr18 45687806 45688022 -40300912 - MER7A DNA MER2_type -2692 346 103 5775 104 15 1 chr18 45688022 45689211 -40299723 + L1PA13 LINE L1 4927 6144 -19 1425 135 150 86 chr18 45689211 45689321 -40299613 - MER7A DNA MER2_type -2935 103 1 2520 176 43 24 chr18 45689428 45689893 -40299041 + MLT2B1 LTR ERVL 1 478 -42 533 53 26 0 chr18 45689893 45689969 -40298965 + (TCTA)n Simple_repeat Simple_repeat 1 78 0 2520 176 43 24 chr18 45689969 45690013 -40298921 + MLT2B1 LTR ERVL 478 520 0 1775 129 42 7 chr18 45691214 45691500 -40297434 - AluSx SINE Alu -16 296 1 36 0 0 0 chr18 45692122 45692158 -40296776 + AT_rich Low_complexity Low_complexity 1 36 0 7573 150 47 1 chr18 45692721 45694870 -40294064 - L1PA11 LINE L1 -2 6172 3957 360 0 0 0 chr18 45694870 45694910 -40294024 + (TG)n Simple_repeat Simple_repeat 2 41 0 2132 88 0 34 chr18 45694910 45695204 -40293730 - AluY SINE Alu -27 284 1 3912 196 32 2 chr18 45695206 45696050 -40292884 - L1P LINE L1 -744 5402 4534 1207 246 15 0 chr18 45696041 45696370 -40292564 + L1P LINE L1 4197 4530 -1616 * 4208 203 28 13 chr18 45696370 45697298 -40291636 - ERVL LTR ERVL -597 5167 4198 3951 280 49 13 chr18 45697298 45698792 -40290142 - ERVL LTR ERVL -3796 1968 335 31 0 0 0 chr18 45699588 45699619 -40289315 + AT_rich Low_complexity Low_complexity 1 31 0 23 54 0 0 chr18 45699658 45699695 -40289239 + AT_rich Low_complexity Low_complexity 1 37 0 472 235 7 0 chr18 45699717 45699853 -40289081 + MER31-int LTR ERV1 1310 1446 -3490 272 233 80 33 chr18 45700043 45700193 -40288741 + MER31-int LTR ERV1 1759 1915 -3021 247 283 50 44 chr18 45700449 45700608 -40288326 - Charlie1 DNA MER1_type -29 2732 2573 321 129 0 75 chr18 45701160 45701253 -40287681 + LTR37A LTR ERV1 339 424 -2 21 36 0 0 chr18 45701261 45701289 -40287645 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr18 45701762 45701790 -40287144 + AT_rich Low_complexity Low_complexity 1 28 0 2279 112 3 0 chr18 45701803 45702106 -40286828 + AluSg SINE Alu 1 304 -6 2275 195 42 16 chr18 45703333 45703883 -40285051 + ERVL-C1 LTR ERVL 4576 5167 -597 1156 244 16 0 chr18 45703883 45704203 -40284731 - L1PA15 LINE L1 -1616 4530 4206 4602 128 45 48 chr18 45704203 45705049 -40283885 + L1PA15 LINE L1 4534 5379 -786 2397 72 0 28 chr18 45705049 45705367 -40283567 + AluY SINE Alu 1 309 -2 4602 128 45 48 chr18 45705367 45706149 -40282785 + L1PA15 LINE L1 5379 6162 -3 1519 207 65 42 chr18 45706151 45706625 -40282309 + ERVL-C1 LTR ERVL 5134 5593 -61 801 251 89 52 chr18 45706655 45707038 -40281896 + MLT2C1 LTR ERVL 1 397 0 252 0 0 0 chr18 45707120 45707148 -40281786 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1545 241 44 44 chr18 45707673 45708176 -40280758 + MLT1D LTR MaLR 3 505 0 252 86 0 0 chr18 45708637 45708672 -40280262 + (TG)n Simple_repeat Simple_repeat 1 35 0 627 248 85 0 chr18 45711136 45711289 -40277645 - MIR SINE MIR -18 244 79 1776 181 3 16 chr18 45711386 45711701 -40277233 + AluJo SINE Alu 1 311 -1 1425 135 150 86 chr18 45711703 45711919 -40277015 - MER7A DNA MER2_type -2692 346 103 5775 104 15 1 chr18 45711919 45713108 -40275826 + L1PA13 LINE L1 4927 6144 -19 1425 135 150 86 chr18 45713108 45713218 -40275716 - MER7A DNA MER2_type -2935 103 1 2520 176 43 24 chr18 45713325 45713790 -40275144 + MLT2B1 LTR ERVL 1 478 -42 497 56 28 0 chr18 45713790 45713862 -40275072 + (TCTA)n Simple_repeat Simple_repeat 1 74 0 2520 176 43 24 chr18 45713862 45713906 -40275028 + MLT2B1 LTR ERVL 478 520 0 1767 130 42 7 chr18 45715108 45715393 -40273541 - AluSx SINE Alu -17 295 1 36 0 0 0 chr18 45716015 45716051 -40272883 + AT_rich Low_complexity Low_complexity 1 36 0 11116 151 33 8 chr18 45716614 45718763 -40270171 - L1PA11 LINE L1 -2 6172 4078 360 0 0 0 chr18 45718763 45718803 -40270131 + (TG)n Simple_repeat Simple_repeat 2 41 0 2243 87 3 7 chr18 45718803 45719090 -40269844 - AluSp SINE Alu -27 286 1 11116 151 33 8 chr18 45719090 45719732 -40269202 - L1PA11 LINE L1 -2095 4079 3326 180 77 0 0 chr18 45720979 45721005 -40267929 + (T)n Simple_repeat Simple_repeat 1 26 0 263 255 28 14 chr18 45721515 45721656 -40267278 + (CAATT)n Simple_repeat Simple_repeat 5 147 0 202 270 54 40 chr18 45721959 45722033 -40266901 - L2 LINE L2 -19 3294 3220 21 0 0 0 chr18 45722448 45722469 -40266465 + AT_rich Low_complexity Low_complexity 1 21 0 295 286 79 36 chr18 45722497 45722637 -40266297 - MIR SINE MIR -52 210 65 203 200 0 0 chr18 45723682 45723722 -40265212 - L2 LINE L2 -9 3304 3265 251 254 0 60 chr18 45724140 45724207 -40264727 - L2 LINE L2 0 3272 3210 3929 143 16 2 chr18 45726955 45727579 -40261355 - MER41B LTR ERV1 0 635 3 779 354 58 15 chr18 45727760 45728155 -40260779 + LTR33 LTR ERVL 105 516 -5 1749 238 57 30 chr18 45728471 45728963 -40259971 - MLT1D LTR MaLR 0 505 1 1042 200 20 29 chr18 45728964 45729209 -40259725 + MLT2D LTR ERVL 1 243 -171 222 171 0 0 chr18 45729290 45729331 -40259603 + (TG)n Simple_repeat Simple_repeat 2 42 0 265 213 0 0 chr18 45729332 45729379 -40259555 + MLT2D LTR ERVL 368 414 0 1838 263 23 65 chr18 45729933 45730583 -40258351 + MLT1E2 LTR MaLR 1 623 -3 281 340 66 0 chr18 45732155 45732261 -40256673 + L2 LINE L2 3144 3256 -16 374 306 61 7 chr18 45733177 45733324 -40255610 - MIR SINE MIR -61 201 47 1036 118 190 10 chr18 45733380 45733575 -40255359 + MER30 DNA MER1_type 1 230 0 1325 252 143 13 chr18 45734057 45734505 -40254429 + MLT1H LTR MaLR 3 508 -41 209 416 11 0 chr18 45734603 45734727 -40254207 + MIR SINE MIR 14 140 -68 227 385 103 0 chr18 45735334 45735451 -40253483 + MER5A DNA MER1_type 60 188 -1 268 239 197 17 chr18 45736218 45736335 -40252599 - MIR SINE MIR -6 256 119 272 262 32 100 chr18 45736551 45736830 -40252104 - MER112 DNA MER1_type 0 260 1 386 260 87 52 chr18 45737631 45737804 -40251130 - MIR SINE MIR -56 206 28 245 308 84 35 chr18 45739358 45739501 -40249433 + MIR SINE MIR 13 162 -46 321 289 70 26 chr18 45739589 45739703 -40249231 - MIR SINE MIR -109 153 35 209 267 0 17 chr18 45739959 45740019 -40248915 + CT-rich Low_complexity Low_complexity 4 62 0 247 323 191 21 chr18 45740633 45740822 -40248112 + MIR SINE MIR 23 243 -19 1043 140 29 54 chr18 45741059 45741303 -40247631 + L1MA9 LINE L1 6056 6166 0 1578 193 25 14 chr18 45741303 45741588 -40247346 + AluJb SINE Alu 1 288 -24 239 330 93 17 chr18 45742136 45742254 -40246680 - MIR SINE MIR -108 154 28 2145 106 3 0 chr18 45742255 45742537 -40246397 + AluSg SINE Alu 1 283 -27 222 62 0 0 chr18 45742537 45742569 -40246365 + (CATA)n Simple_repeat Simple_repeat 2 33 0 34401 109 16 15 chr18 45743325 45749464 -40239470 - L1PA6 LINE L1 -2 6152 12 192 262 0 0 chr18 45750566 45750608 -40238326 - L2 LINE L2 0 3313 3272 442 288 147 0 chr18 45752012 45752182 -40236752 + MIR SINE MIR 38 232 -30 237 182 13 26 chr18 45752331 45752408 -40236526 + (TA)n Simple_repeat Simple_repeat 1 76 0 21 36 0 0 chr18 45752493 45752521 -40236413 + AT_rich Low_complexity Low_complexity 1 28 0 236 319 0 0 chr18 45753238 45753307 -40235627 + MIR3 SINE MIR 133 201 -7 412 307 39 20 chr18 45754143 45754296 -40234638 - MIR3 SINE MIR -15 193 38 382 310 124 58 chr18 45754540 45754814 -40234120 + L1MEc LINE L1 232 523 -5873 857 267 29 0 chr18 45754919 45755192 -40233742 - L1MCc LINE L1 -4888 1535 1255 1144 325 130 34 chr18 45755204 45756187 -40232747 - L1MCc LINE L1 -5288 1135 58 29 47 0 0 chr18 45756233 45756276 -40232658 + AT_rich Low_complexity Low_complexity 1 43 0 1653 153 41 3 chr18 45756347 45756641 -40232293 - MER7A DNA MER2_type -1 345 43 29 0 0 0 chr18 45756702 45756731 -40232203 + AT_rich Low_complexity Low_complexity 1 29 0 524 266 94 38 chr18 45756819 45757138 -40231796 + L1M4 LINE L1 4522 4858 -1288 2178 214 25 2 chr18 45757180 45757651 -40231283 - L1MD1 LINE L1 -20 6222 5741 2109 147 0 0 chr18 45757824 45758136 -40230798 - AluSx SINE Alu 0 312 1 1027 296 52 45 chr18 45758276 45758678 -40230256 + L1MA6 LINE L1 3 407 -6382 * 10328 191 35 34 chr18 45758675 45760179 -40228755 + L1MA6 LINE L1 3399 4899 -2043 1746 133 11 14 chr18 45760179 45760457 -40228477 + AluSx SINE Alu 11 287 -25 10328 191 35 34 chr18 45760457 45761498 -40227436 + L1MA6 LINE L1 4899 5952 -990 1738 142 38 3 chr18 45761498 45761787 -40227147 + AluJb SINE Alu 9 307 -5 10328 191 35 34 chr18 45761787 45762780 -40226154 + L1MA6 LINE L1 5952 6942 0 317 340 148 10 chr18 45762857 45763066 -40225868 + L2 LINE L2 2917 3154 -159 355 158 0 0 chr18 45764780 45764837 -40224097 - MER5A DNA MER1_type -132 57 1 180 0 0 0 chr18 45765039 45765059 -40223875 + (A)n Simple_repeat Simple_repeat 1 20 0 1254 117 62 43 chr18 45766052 45766309 -40222625 + L1MA1 LINE L1 6041 6302 0 18921 28 0 3 chr18 45768422 45771452 -40217482 + L1PA3 LINE L1 3131 6155 0 810 285 126 20 chr18 45772305 45772867 -40216067 - L2 LINE L2 -5 3308 2623 180 77 0 0 chr18 45776877 45776903 -40212031 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 2130 187 70 58 chr18 45777411 45777993 -40210941 - L1MD3 LINE L1 -1 7994 7406 240 279 38 0 chr18 45777995 45778074 -40210860 - MLT1F1 LTR MaLR -442 125 44 532 268 7 0 chr18 45778081 45778219 -40210715 - L1MD3 LINE L1 -696 7299 7161 251 275 0 0 chr18 45778236 45778327 -40210607 - L1M4 LINE L1 -2641 3505 3415 * 1535 291 17 2 chr18 45778323 45778791 -40210143 + L1ME3A LINE L1 5686 6160 -10 192 384 14 0 chr18 45779372 45779445 -40209489 - L3 LINE CR1 -1474 103 30 184 119 24 24 chr18 45780039 45780081 -40208853 + (TA)n Simple_repeat Simple_repeat 1 42 0 203 255 20 0 chr18 45781597 45781648 -40207286 - MIR SINE MIR -1 261 210 1137 281 144 48 chr18 45781692 45782578 -40206356 - L2 LINE L2 -14 3299 2328 409 320 20 40 chr18 45782593 45782793 -40206141 - MIR SINE MIR -65 197 2 218 337 45 0 chr18 45784392 45784481 -40204453 - MIR3 SINE MIR -19 189 97 214 184 0 195 chr18 45785335 45785422 -40203512 - L2 LINE L2 0 3313 3244 202 360 0 0 chr18 45786382 45786457 -40202477 - MIR SINE MIR -19 243 169 234 0 0 0 chr18 45786549 45786575 -40202359 + (T)n Simple_repeat Simple_repeat 1 26 0 457 167 59 0 chr18 45787324 45787426 -40201508 + L1MC3 LINE L1 7670 7777 -8 715 312 37 23 chr18 45788906 45789181 -40199753 - LTR16A LTR ERVL -112 338 62 383 331 62 91 chr18 45789987 45790483 -40198451 + L1ME3A LINE L1 340 821 -5384 311 295 157 6 chr18 45790503 45790669 -40198265 + L1ME3A LINE L1 2097 2287 -4109 353 342 62 16 chr18 45790761 45791004 -40197930 + L1ME3A LINE L1 2404 2657 -3558 348 288 98 9 chr18 45791027 45791242 -40197692 + L1ME3A LINE L1 2707 2940 -3275 355 100 29 0 chr18 45791334 45791404 -40197530 + (TA)n Simple_repeat Simple_repeat 2 73 0 2750 167 84 8 chr18 45791729 45792315 -40196619 + L1MB1 LINE L1 5534 6163 -5 433 305 71 17 chr18 45792411 45792765 -40196169 + L1ME3A LINE L1 3544 3916 -2299 992 139 0 0 chr18 45792774 45792925 -40196009 + AluSp/q SINE Alu 158 308 -5 39148 76 10 3 chr18 45792925 45799022 -40189912 + L1PA5 LINE L1 3 6138 -16 402 286 85 32 chr18 45799022 45799211 -40189723 + L1ME3A LINE L1 3906 4104 -2111 1632 213 11 11 chr18 45799211 45799586 -40189348 - L1PB4 LINE L1 0 6859 6485 2253 90 3 3 chr18 45799594 45799883 -40189051 - AluSp SINE Alu -23 290 2 320 278 22 0 chr18 45799883 45799973 -40188961 - L1MC4 LINE L1 -1335 6707 6616 11645 230 26 7 chr18 45799974 45803614 -40185320 - L1PB4 LINE L1 -369 6490 2787 464 269 172 37 chr18 45803619 45804177 -40184757 + L1ME3A LINE L1 4101 4745 -1470 7458 35 0 9 chr18 45804177 45805695 -40183239 - L1PA4 LINE L1 -4 6151 4640 464 269 172 37 chr18 45805695 45805728 -40183206 + L1ME3A LINE L1 4745 4772 -1443 827 86 0 0 chr18 45805728 45805844 -40183090 - L1P3 LINE L1 -720 5434 5319 701 251 40 13 chr18 45805854 45806081 -40182853 - MER20B DNA MER1_type -113 670 438 1515 263 53 76 chr18 45806097 45806961 -40181973 + L1ME3A LINE L1 5393 6236 -3 604 266 93 36 chr18 45806998 45807399 -40181535 + L1M4 LINE L1 2271 2701 -3445 1954 159 7 0 chr18 45807399 45807700 -40181234 + AluSx SINE Alu 1 303 -9 604 266 93 36 chr18 45807700 45807737 -40181197 + L1M4 LINE L1 2701 2734 -3412 1158 148 5 78 chr18 45807905 45808122 -40180812 + AluJb SINE Alu 101 301 -11 245 304 107 54 chr18 45808145 45808257 -40180677 + MIR SINE MIR 3 120 -142 * 391 333 62 0 chr18 45808230 45808359 -40180575 - L2 LINE L2 -2 3270 3134 2188 49 7 21 chr18 45808360 45808682 -40180252 + AluY SINE Alu 1 318 0 559 275 92 11 chr18 45808684 45808957 -40179977 - L1M4 LINE L1 -848 5298 5004 618 153 10 0 chr18 45809063 45809161 -40179773 - AluS SINE Alu -211 101 3 244 275 25 12 chr18 45809167 45809247 -40179687 - L1MC5 LINE L1 -568 7393 7313 1034 103 135 0 chr18 45809263 45809419 -40179515 - AluJb SINE Alu -1 311 135 2166 97 4 0 chr18 45809420 45809699 -40179235 - AluSg SINE Alu -21 289 10 1744 251 151 41 chr18 45809750 45810336 -40178598 + L1M4 LINE L1 2841 3361 -2785 2486 77 0 0 chr18 45810336 45810646 -40178288 - AluY SINE Alu -1 310 1 1744 251 151 41 chr18 45810646 45810710 -40178224 + L1M4 LINE L1 3361 3417 -2729 1753 121 104 7 chr18 45810710 45810990 -40177944 - AluSx SINE Alu -5 307 1 1744 251 151 41 chr18 45810990 45811837 -40177097 + L1M4 LINE L1 3417 4505 -1641 23 0 0 0 chr18 45811955 45811978 -40176956 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr18 45812353 45812374 -40176560 + AT_rich Low_complexity Low_complexity 1 21 0 1714 108 25 108 chr18 45812898 45813214 -40175720 - AluSx SINE Alu -22 290 1 869 311 47 14 chr18 45813710 45814006 -40174928 - L3 LINE CR1 -9 1568 1263 2307 107 0 0 chr18 45814732 45815041 -40173893 - AluSc SINE Alu 0 309 1 180 0 0 0 chr18 45815090 45815110 -40173824 + (T)n Simple_repeat Simple_repeat 1 20 0 24 32 0 0 chr18 45815125 45815156 -40173778 + AT_rich Low_complexity Low_complexity 1 31 0 815 284 79 54 chr18 45817658 45818081 -40170853 - MLT1J LTR MaLR 0 511 39 2466 188 112 9 chr18 45821784 45822328 -40166606 - MER7C DNA MER2_type 0 602 3 451 49 62 86 chr18 45823303 45823384 -40165550 - MADE1 DNA Mariner 0 80 2 279 304 70 70 chr18 45823657 45823772 -40165162 - L2 LINE L2 -2 3270 3156 7545 24 4 6 chr18 45823828 45825217 -40163717 + L1PA4 LINE L1 4768 6155 0 9139 188 24 9 chr18 45825334 45826034 -40162900 - L1PA15 LINE L1 -14 6151 5462 1658 240 67 67 chr18 45826034 45826588 -40162346 + MLT2B3 LTR ERVL 1 554 0 9139 188 24 9 chr18 45826588 45828742 -40160192 - L1PA15 LINE L1 -703 5462 3256 4630 201 70 12 chr18 45828737 45830422 -40158512 - L1MA3 LINE L1 -259 7465 5668 * 2049 194 76 10 chr18 45830425 45830822 -40158112 - MSTA LTR MaLR -5 423 1 8643 175 42 14 chr18 45830822 45834197 -40154737 - L1MA3 LINE L1 -1894 5671 2200 5803 149 22 0 chr18 45834196 45834542 -40154392 - L1PB1 LINE L1 -7 7563 7226 * 396 0 0 0 chr18 45834542 45834586 -40154348 + (TG)n Simple_repeat Simple_repeat 2 45 0 5803 149 22 0 chr18 45834586 45835483 -40153451 - L1PB1 LINE L1 -344 7226 6292 210 105 0 0 chr18 45835483 45835521 -40153413 + (T)n Simple_repeat Simple_repeat 1 38 0 1457 211 3 7 chr18 45835552 45835850 -40153084 + L1 LINE L1 3761 4057 -2089 8414 186 107 10 chr18 45835859 45837494 -40151440 - L1PB1 LINE L1 -5753 1812 19 346 159 0 0 chr18 45837495 45837558 -40151376 + Tigger3(Golem) DNA MER2_type 2778 2840 -189 1194 208 0 5 chr18 45837607 45837814 -40151120 + Tigger3(Golem) DNA MER2_type 2824 3029 0 244 294 46 51 chr18 45837882 45838022 -40150912 - MIR SINE MIR -62 146 21 443 239 112 88 chr18 45838326 45838745 -40150189 + L1MC5 LINE L1 6768 7196 -765 546 243 21 0 chr18 45838745 45838885 -40150049 + FLAM_C SINE Alu 1 143 0 499 238 68 99 chr18 45839045 45839529 -40149405 + L1MC5 LINE L1 7261 7729 -232 5884 165 21 9 chr18 45839760 45841444 -40147490 - L1MA3 LINE L1 0 7724 6019 1059 260 15 23 chr18 45841455 45841810 -40147124 - L1M4c LINE L1 -4438 1944 1545 1284 91 20 10 chr18 45841810 45842007 -40146927 - L1PA10 LINE L1 0 6168 5970 5907 210 53 21 chr18 45842007 45842259 -40146675 - L1MA3 LINE L1 -1548 6017 5774 2008 122 10 7 chr18 45842259 45842553 -40146381 + AluSx SINE Alu 1 295 -17 5907 210 53 21 chr18 45842553 45843945 -40144989 - L1MA3 LINE L1 -1791 5774 4320 6472 79 10 0 chr18 45843945 45845196 -40143738 - L1PA7 LINE L1 0 6154 4892 9640 42 0 0 chr18 45845196 45847204 -40141730 + L1PA3 LINE L1 4186 6198 0 22902 130 54 71 chr18 45847204 45851790 -40137144 - L1PA7 LINE L1 -1246 4900 405 280 0 50 0 chr18 45851790 45851830 -40137104 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 22902 130 54 71 chr18 45851830 45852217 -40136717 - L1PA7 LINE L1 -5741 405 13 2533 238 26 7 chr18 45852227 45852726 -40136208 - L1MA3 LINE L1 -3236 4329 3812 204 40 0 0 chr18 45852726 45852751 -40136183 + (TTA)n Simple_repeat Simple_repeat 3 27 0 2533 238 26 7 chr18 45852751 45852939 -40135995 - L1MA3 LINE L1 -3753 3812 3629 2653 180 37 7 chr18 45852997 45853536 -40135398 - L1PA16 LINE L1 -9 6157 5603 * 6302 76 19 0 chr18 45853533 45854882 -40134052 - L1PA7 LINE L1 -4 6150 4802 308 158 0 18 chr18 45854892 45854949 -40133985 + L1MC4 LINE L1 6648 6703 -1339 309 172 49 16 chr18 45854949 45855071 -40133863 + (TAAA)n Simple_repeat Simple_repeat 4 129 0 384 124 46 20 chr18 45855077 45855230 -40133704 + (TATAA)n Simple_repeat Simple_repeat 2 158 0 468 162 0 10 chr18 45855405 45855504 -40133430 + (TA)n Simple_repeat Simple_repeat 1 98 0 22337 130 36 89 chr18 45855505 45860550 -40128384 - L1PA16 LINE L1 -1355 4791 13 3674 195 68 18 chr18 45860568 45861498 -40127436 - L1P4 LINE L1 -555 7048 6003 1527 120 0 5 chr18 45861498 45861741 -40127193 + AluSg/x SINE Alu 76 317 0 3674 195 68 18 chr18 45861741 45862206 -40126728 - L1P4 LINE L1 -1600 6003 5563 2016 70 8 4 chr18 45862215 45862471 -40126463 - AluY SINE Alu -11 300 44 5858 148 57 14 chr18 45862474 45862919 -40126015 - L1MA3 LINE L1 -3934 3631 3207 1239 56 19 0 chr18 45862919 45863079 -40125855 - L1PA8 LINE L1 -4 6168 6006 5858 148 57 14 chr18 45863079 45863891 -40125043 - L1MA3 LINE L1 -4358 3207 2319 4038 161 36 28 chr18 45863889 45864805 -40124129 - L1P4 LINE L1 -2229 5355 4433 * 6069 235 49 13 chr18 45864806 45866534 -40122400 - L1P4 LINE L1 -3467 4117 2327 342 143 0 32 chr18 45866526 45866589 -40122345 - L1P4 LINE L1 -6081 1500 1440 * 1586 252 123 28 chr18 45866583 45867183 -40121751 - L1P4 LINE L1 -6750 831 175 525 250 42 24 chr18 45867309 45867521 -40121413 + L1MC/D LINE L1 5288 5503 -2282 321 304 52 30 chr18 45867578 45867713 -40121221 + L1MEc LINE L1 757 894 -5502 24960 133 36 60 chr18 45867725 45871171 -40117763 + L1PA8 LINE L1 14 3211 -2961 2431 55 0 3 chr18 45871171 45871464 -40117470 + AluY SINE Alu 1 292 -19 24960 133 36 60 chr18 45871464 45874357 -40114577 + L1PA8 LINE L1 3211 6172 0 1840 162 124 23 chr18 45874918 45875306 -40113628 - MSTA LTR MaLR -1 427 1 1443 117 29 0 chr18 45875330 45875569 -40113365 - MSTA-int LTR MaLR -1380 271 26 1735 170 149 13 chr18 45875573 45875949 -40112985 - MSTA LTR MaLR 0 428 2 213 217 43 0 chr18 45876032 45876101 -40112833 + T-rich Low_complexity Low_complexity 2 73 0 2208 93 4 0 chr18 45877817 45878139 -40110795 + AluSg SINE Alu 1 323 0 200 278 0 78 chr18 45878197 45878234 -40110700 + MIR SINE MIR 162 200 -62 1859 113 4 8 chr18 45878234 45878499 -40110435 + AluSg SINE Alu 44 307 -3 200 278 0 78 chr18 45878499 45878551 -40110383 + MIR SINE MIR 200 244 -18 702 188 0 36 chr18 45881075 45881213 -40107721 - FLAM_A SINE Alu 0 133 1 446 255 20 0 chr18 45881580 45881733 -40107201 + MER103 DNA DNA 9 164 -2 413 333 48 14 chr18 45883392 45883539 -40105395 + L2 LINE L2 3091 3242 -30 243 0 0 0 chr18 45883869 45883896 -40105038 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 716 307 58 23 chr18 45884261 45884606 -40104328 - LTR16A LTR ERVL 0 450 94 283 335 43 23 chr18 45884904 45885060 -40103874 - MIR SINE MIR -68 140 38 328 276 43 26 chr18 45885390 45885506 -40103428 + MIR3 SINE MIR 73 190 -18 23 0 0 0 chr18 45885876 45885899 -40103035 + AT_rich Low_complexity Low_complexity 1 23 0 466 282 136 15 chr18 45887563 45887796 -40101138 + MIR SINE MIR 3 260 -2 370 319 25 0 chr18 45889587 45889706 -40099228 + MIR3 SINE MIR 79 200 -8 30 27 0 0 chr18 45890826 45890863 -40098071 + AT_rich Low_complexity Low_complexity 1 37 0 1439 139 29 0 chr18 45891336 45891581 -40097353 - L1MA2 LINE L1 0 6304 6053 216 0 0 0 chr18 45891698 45891722 -40097212 + (ATG)n Simple_repeat Simple_repeat 2 25 0 28 29 0 0 chr18 45892549 45892584 -40096350 + AT_rich Low_complexity Low_complexity 1 35 0 2069 133 7 0 chr18 45893320 45893614 -40095320 - AluSp SINE Alu -17 296 1 1164 312 103 32 chr18 45895212 45896112 -40092822 - L2 LINE L2 -10 3303 2335 552 333 64 14 chr18 45896130 45896427 -40092507 - MLT1I LTR MaLR -32 377 66 267 103 0 0 chr18 45896451 45896490 -40092444 + (ATG)n Simple_repeat Simple_repeat 1 39 0 1242 251 157 39 chr18 45896519 45896936 -40091998 - L2 LINE L2 -986 2328 1807 2130 163 65 0 chr18 45896936 45897322 -40091612 - LTR57 LTR ERVL 0 411 1 1242 251 157 39 chr18 45897322 45897549 -40091385 - L2 LINE L2 -1507 1807 1608 5194 270 73 34 chr18 45897549 45898331 -40090603 + L1M4b LINE L1 2 752 -6207 2178 122 7 3 chr18 45898331 45898634 -40090300 + AluSg SINE Alu 1 304 -6 5194 270 73 34 chr18 45898634 45899105 -40089829 + L1M4b LINE L1 752 1203 -5756 180 0 0 0 chr18 45899105 45899125 -40089809 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5194 270 73 34 chr18 45899125 45900133 -40088801 + L1M4b LINE L1 1203 2363 -4596 345 47 0 0 chr18 45900133 45900176 -40088758 + (CA)n Simple_repeat Simple_repeat 2 44 0 5194 270 73 34 chr18 45900176 45900225 -40088709 + L1M4b LINE L1 2363 2409 -4550 2250 65 4 7 chr18 45900367 45900646 -40088288 - AluY SINE Alu -33 278 1 2808 266 73 32 chr18 45900736 45902319 -40086615 + L1M4b LINE L1 2604 4231 -2726 1549 199 40 50 chr18 45902321 45902697 -40086237 - MLT1A2 LTR MaLR -2 372 1 932 291 115 49 chr18 45902748 45903218 -40085716 - MLT2B1 LTR ERVL 0 520 20 473 212 0 0 chr18 45953250 45953335 -40035599 + FLAM_A SINE Alu 40 124 -18 338 222 0 56 chr18 45953342 45953432 -40035502 + MIR SINE MIR 137 221 -41 738 178 0 0 chr18 45953436 45953554 -40035380 + FLAM_A SINE Alu 1 118 -15 407 324 37 15 chr18 45954431 45954567 -40034367 - MIR3 SINE MIR -56 152 14 216 0 0 0 chr18 45954910 45954934 -40034000 + (TA)n Simple_repeat Simple_repeat 2 25 0 300 336 40 48 chr18 45955284 45955409 -40033525 - L2 LINE L2 -16 3256 3133 436 265 64 39 chr18 45957416 45957620 -40031314 - L1M4 LINE L1 -1438 4708 4500 2349 100 0 0 chr18 45957749 45958058 -40030876 - AluSg SINE Alu -1 309 1 380 253 130 0 chr18 45958385 45958547 -40030387 + L1M4 LINE L1 3064 3246 -2900 383 239 243 38 chr18 45958756 45959019 -40029915 - L1MEd LINE L1 -4880 1239 923 549 255 64 0 chr18 45960373 45960514 -40028420 - MIR SINE MIR -44 218 69 2019 124 6 51 chr18 45960788 45961103 -40027831 - AluSx SINE Alu -11 301 1 26 30 0 0 chr18 45961558 45961591 -40027343 + AT_rich Low_complexity Low_complexity 1 33 0 1077 209 60 95 chr18 45962558 45963031 -40025903 + MER66A LTR ERV1 97 475 -3 610 326 50 0 chr18 45963298 45963537 -40025397 - MIR SINE MIR 0 262 12 222 204 23 0 chr18 45963545 45963589 -40025345 + (TGGA)n Simple_repeat Simple_repeat 1 45 0 241 265 58 138 chr18 45963799 45963880 -40025054 + MER5A DNA MER1_type 7 93 -96 2208 90 7 3 chr18 45963880 45964168 -40024766 + AluSc SINE Alu 1 289 -20 241 265 58 138 chr18 45964168 45964275 -40024659 + MER5A DNA MER1_type 93 180 -9 273 316 43 29 chr18 45964889 45965028 -40023906 + MIR SINE MIR 90 230 -32 486 276 81 6 chr18 45966457 45966631 -40022303 + MLT1C LTR MaLR 207 393 -74 272 83 0 0 chr18 45966698 45966734 -40022200 + MER96B DNA MER1_type? 211 246 -171 33 25 0 0 chr18 45967053 45967093 -40021841 + AT_rich Low_complexity Low_complexity 1 40 0 1415 150 58 84 chr18 45969740 45970119 -40018815 + THE1C LTR MaLR 1 369 -6 9437 135 22 32 chr18 45970124 45971717 -40017217 + THE1C-int LTR MaLR 4 1580 0 1646 153 49 75 chr18 45971717 45972102 -40016832 + THE1C LTR MaLR 1 375 0 213 121 0 0 chr18 45972920 45972953 -40015981 + (TG)n Simple_repeat Simple_repeat 2 34 0 2243 139 25 56 chr18 45972967 45973414 -40015520 + Tigger2a DNA MER2_type 1 433 -1 319 41 41 0 chr18 45974075 45974124 -40014810 + (TG)n Simple_repeat Simple_repeat 2 52 0 11386 210 51 25 chr18 45974763 45976737 -40012197 + L1M1 LINE L1 2571 4492 -3073 1952 157 0 0 chr18 45976737 45977023 -40011911 - AluSx SINE Alu -21 291 6 11386 210 51 25 chr18 45977023 45978872 -40010062 + L1M1 LINE L1 4492 6501 -1064 480 179 60 0 chr18 45978872 45978989 -40009945 + L1MA4 LINE L1 6176 6299 -1 234 236 14 14 chr18 45978998 45979070 -40009864 + (TA)n Simple_repeat Simple_repeat 2 73 0 241 272 58 19 chr18 45979107 45979313 -40009621 + L1MEc LINE L1 1255 1468 -4928 237 286 33 0 chr18 45979383 45979474 -40009460 + L1MEc LINE L1 1565 1658 -4738 21 36 0 0 chr18 45979539 45979567 -40009367 + AT_rich Low_complexity Low_complexity 1 28 0 295 270 40 7 chr18 45979766 45979918 -40009016 - L1M4 LINE L1 -1490 4656 4500 486 143 0 31 chr18 45980043 45980141 -40008793 - AluSg/x SINE Alu 0 312 218 328 135 27 27 chr18 45980314 45980388 -40008546 + (CATATA)n Simple_repeat Simple_repeat 3 76 0 363 219 0 0 chr18 45980410 45980483 -40008451 + Tigger5 DNA MER2_type 2251 2323 0 27 62 0 0 chr18 45981344 45981392 -40007542 + AT_rich Low_complexity Low_complexity 1 48 0 234 0 0 0 chr18 45981465 45981491 -40007443 + (TTG)n Simple_repeat Simple_repeat 2 27 0 25 31 0 0 chr18 45981513 45981545 -40007389 + AT_rich Low_complexity Low_complexity 1 32 0 1537 189 63 65 chr18 45981713 45982110 -40006824 + MSTD LTR MaLR 1 396 0 552 349 62 24 chr18 45982119 45982489 -40006445 + L1M4 LINE L1 4669 5052 -1094 32 43 0 0 chr18 45982494 45982540 -40006394 + AT_rich Low_complexity Low_complexity 1 46 0 211 340 80 10 chr18 45983264 45983404 -40005530 - MIR3 SINE MIR -41 167 19 1826 252 23 8 chr18 45983404 45983885 -40005049 + MER119 DNA MER1_type 5 492 -91 2173 101 3 36 chr18 45984306 45984612 -40004322 + AluSx SINE Alu 1 296 -16 2389 91 0 0 chr18 45984898 45985195 -40003739 + AluSc SINE Alu 1 297 -12 2685 130 13 24 chr18 45985522 45985977 -40002957 - MER41E LTR ERV1 -46 466 17 382 352 26 13 chr18 45986561 45986791 -40002143 + Charlie8 DNA MER1_type 2 234 -2183 196 286 16 111 chr18 45986856 45986982 -40001952 - MIR SINE MIR -57 151 38 236 297 0 0 chr18 45987249 45987313 -40001621 + MIR SINE MIR 50 113 -95 186 278 28 83 chr18 45988082 45988190 -40000744 + L2 LINE L2 2994 3095 -177 225 257 71 0 chr18 45988452 45988522 -40000412 - MIR3 SINE MIR -45 163 89 364 287 14 35 chr18 45988747 45988890 -40000044 + MIR SINE MIR 121 260 -2 234 0 0 0 chr18 45988922 45988948 -39999986 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 230 0 33 0 chr18 45989483 45989513 -39999421 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 736 182 0 0 chr18 45989518 45989628 -39999306 - FLAM_C SINE Alu -33 110 1 235 255 20 10 chr18 45989648 45989746 -39999188 + Charlie7 DNA MER1_type 2495 2593 -19 354 302 118 38 chr18 45991238 45991450 -39997484 + MIR SINE MIR 31 259 -3 226 349 132 9 chr18 45992917 45993129 -39995805 + L2 LINE L2 2168 2405 -909 234 0 0 0 chr18 45993594 45993620 -39995314 + (CA)n Simple_repeat Simple_repeat 2 27 0 606 305 57 14 chr18 45993655 45994006 -39994928 + Charlie7 DNA MER1_type 119 484 -2128 370 343 28 7 chr18 45995108 45995251 -39993683 + MIR SINE MIR 1 146 -116 419 240 48 0 chr18 45995377 45995502 -39993432 + L1PB4 LINE L1 5164 5294 -852 2704 164 1 22 chr18 45995625 45996215 -39992719 + L1PB4 LINE L1 5482 6038 -118 334 255 53 72 chr18 45996215 45996428 -39992506 + L1ME3A LINE L1 1102 1350 -4862 * 357 313 0 0 chr18 45996426 45996538 -39992396 + L1ME3A LINE L1 4719 4830 -1299 383 302 28 4 chr18 45996718 45996869 -39992065 + L1ME3A LINE L1 5475 5600 -553 454 316 73 12 chr18 45996943 45997285 -39991649 + L1ME3A LINE L1 5571 5933 -220 286 300 9 18 chr18 45997943 45998053 -39990881 - MIR SINE MIR -69 139 31 21110 43 1 1 chr18 45998996 46002373 -39986561 + L1PA5 LINE L1 2769 6146 -8 355 311 81 19 chr18 46002405 46002566 -39986368 + MIR SINE MIR 92 262 0 199 346 51 0 chr18 46005219 46005297 -39983637 + L2 LINE L2 2291 2372 -942 690 231 39 34 chr18 46005315 46005549 -39983385 + L1ME2 LINE L1 5912 6146 -18 914 323 122 41 chr18 46005579 46006452 -39982482 + L2 LINE L2 2365 3313 0 760 263 136 62 chr18 46006543 46007030 -39981904 + MLT1H1 LTR MaLR 30 552 -3 354 227 13 0 chr18 46008524 46008599 -39980335 + MER21B LTR ERV1 12 87 -776 870 264 157 39 chr18 46008630 46008967 -39979967 + MER21B LTR ERV1 26 402 -461 253 273 20 10 chr18 46009668 46009806 -39979128 + A-rich Low_complexity Low_complexity 1 139 0 416 224 19 51 chr18 46009963 46010119 -39978815 - Charlie1 DNA MER1_type 0 2761 2611 657 293 42 14 chr18 46010471 46010683 -39978251 + MIR SINE MIR 4 221 -41 254 281 16 0 chr18 46012400 46012464 -39976470 - MIR3 SINE MIR -34 174 110 543 259 161 0 chr18 46012750 46012924 -39976010 + MIR SINE MIR 8 209 -53 380 300 55 30 chr18 46013411 46013611 -39975323 - L2 LINE L2 -3 3310 3106 255 194 28 0 chr18 46014184 46014256 -39974678 + (TA)n Simple_repeat Simple_repeat 2 75 0 220 224 0 90 chr18 46014402 46014469 -39974465 - MIR SINE MIR -106 102 42 205 122 24 24 chr18 46015014 46015055 -39973879 + CT-rich Low_complexity Low_complexity 6 46 0 221 402 11 0 chr18 46016413 46016500 -39972434 + MIR SINE MIR 2 89 -173 * 236 350 49 35 chr18 46016488 46016631 -39972303 + MIR3 SINE MIR 10 154 -54 28 29 0 0 chr18 46016735 46016770 -39972164 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr18 46017321 46017343 -39971591 + AT_rich Low_complexity Low_complexity 1 22 0 363 229 90 0 chr18 46018108 46018230 -39970704 + MER58 DNA MER1_type 2238 2370 -50 21 0 0 0 chr18 46018629 46018650 -39970284 + AT_rich Low_complexity Low_complexity 1 21 0 1976 120 60 11 chr18 46020714 46020998 -39967936 + AluSx SINE Alu 1 298 -14 279 337 76 0 chr18 46022413 46022505 -39966429 + MIR3 SINE MIR 97 195 -13 200 290 77 77 chr18 46022907 46023076 -39965858 + L2 LINE L2 3131 3299 -14 183 287 69 23 chr18 46023756 46023843 -39965091 - MIR3 SINE MIR -10 198 108 756 291 59 4 chr18 46025084 46025321 -39963613 - L1MC4 LINE L1 -1040 7002 6753 745 177 177 0 chr18 46025321 46025468 -39963466 - MER20 DNA MER1_type -42 177 5 689 293 101 75 chr18 46025473 46025905 -39963029 - L1MC4 LINE L1 -1881 5927 5479 2203 120 27 33 chr18 46025905 46026271 -39962663 + THE1B LTR MaLR 1 364 0 689 293 101 75 chr18 46026271 46026344 -39962590 - L1MC4 LINE L1 -2329 5479 5409 547 326 66 37 chr18 46026583 46026678 -39962256 - L1MC4 LINE L1 -1014 5132 5041 2221 120 25 35 chr18 46026678 46027046 -39961888 + THE1B LTR MaLR 1 364 0 547 326 66 37 chr18 46027046 46027432 -39961502 - L1MC4 LINE L1 -1105 5041 4637 303 298 50 21 chr18 46027466 46027607 -39961327 - L1MC4 LINE L1 -1624 4522 4378 2174 109 0 0 chr18 46028046 46028351 -39960583 + AluSq SINE Alu 1 305 0 705 234 34 23 chr18 46028377 46028690 -39960244 + L1ME LINE L1 5153 5466 -700 405 272 26 0 chr18 46028695 46028809 -39960125 - MLT1I LTR MaLR -292 117 1 198 317 35 55 chr18 46029109 46029254 -39959680 + L2 LINE L2 3169 3310 -3 1953 146 0 10 chr18 46029329 46029623 -39959311 - AluSx SINE Alu -21 291 1 26 0 0 0 chr18 46029757 46029783 -39959151 + AT_rich Low_complexity Low_complexity 1 26 0 356 261 11 0 chr18 46029843 46029931 -39959003 - MIR3 SINE MIR 0 208 120 257 304 36 45 chr18 46030336 46030448 -39958486 - MER5B DNA MER1_type -67 111 1 2770 20 0 0 chr18 46032312 46032618 -39956316 - AluYa5 SINE Alu -5 306 1 285 325 42 25 chr18 46033450 46033570 -39955364 - L3 LINE CR1 -464 1113 992 418 295 84 12 chr18 46034971 46035151 -39953783 + MIR3 SINE MIR 4 195 -13 190 319 43 21 chr18 46035514 46035608 -39953326 - MIR SINE MIR -15 247 152 843 332 39 20 chr18 46037226 46037737 -39951197 + L1ME LINE L1 5254 5770 -351 2243 105 3 0 chr18 46038026 46038322 -39950612 - AluSx SINE Alu -15 297 1 349 362 158 35 chr18 46038322 46038719 -39950215 - L3 LINE CR1 -7 1570 1121 207 0 0 0 chr18 46038785 46038808 -39950126 + (A)n Simple_repeat Simple_repeat 1 23 0 198 0 0 0 chr18 46039089 46039111 -39949823 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 24 0 0 0 chr18 46040532 46040556 -39948378 + AT_rich Low_complexity Low_complexity 1 24 0 185 319 151 0 chr18 46042108 46042227 -39946707 - MIR SINE MIR -50 212 76 300 27 0 0 chr18 46044195 46044232 -39944702 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 318 232 7 80 chr18 46045209 46045360 -39943574 - L1M4 LINE L1 -1084 5062 4923 * 664 192 30 78 chr18 46045358 46045525 -39943409 + L1PB3 LINE L1 5973 6131 -23 208 179 26 0 chr18 46045589 46045667 -39943267 + (TA)n Simple_repeat Simple_repeat 1 80 0 961 255 53 16 chr18 46045668 46046048 -39942886 - L1M4 LINE L1 -1345 4801 4408 292 257 0 35 chr18 46046080 46046193 -39942741 - L1MC4 LINE L1 -124 7918 7810 267 227 15 0 chr18 46046286 46046352 -39942582 - L1MC4 LINE L1 -794 7248 7182 233 325 12 0 chr18 46046361 46046441 -39942493 - L1ME LINE L1 -5984 86 6 1476 208 10 13 chr18 46046508 46046816 -39942118 + AluJo SINE Alu 3 309 -3 237 205 0 0 chr18 46046817 46046856 -39942078 + polypurine Low_complexity Low_complexity 1 39 0 462 154 17 17 chr18 46046860 46046977 -39941957 + GA-rich Low_complexity Low_complexity 4 120 0 426 294 57 57 chr18 46047138 46047349 -39941585 - MIR SINE MIR -5 257 47 506 277 0 7 chr18 46050266 46050403 -39938531 + LTR67 LTR ERVL 418 553 -4 22 0 0 0 chr18 46050702 46050724 -39938210 + AT_rich Low_complexity Low_complexity 1 22 0 492 321 68 34 chr18 46051295 46051532 -39937402 + MIR SINE MIR 12 256 -6 260 230 8 87 chr18 46052569 46052695 -39936239 - MIR SINE MIR -47 215 100 245 276 69 0 chr18 46052813 46052871 -39936063 + L2 LINE L2 3171 3232 -40 261 294 38 0 chr18 46055007 46055103 -39933831 + MIR SINE MIR 69 132 -76 3721 51 0 11 chr18 46056741 46057208 -39931726 + L1PA5 LINE L1 5693 6154 0 21 0 0 0 chr18 46057745 46057766 -39931168 + AT_rich Low_complexity Low_complexity 1 21 0 224 291 23 0 chr18 46057952 46058038 -39930896 - L2 LINE L2 -191 3081 2994 21 0 0 0 chr18 46058289 46058310 -39930624 + AT_rich Low_complexity Low_complexity 1 21 0 491 306 0 0 chr18 46059283 46059407 -39929527 + L2 LINE L2 2635 2758 -556 409 308 100 21 chr18 46059433 46059712 -39929222 - MER102b DNA MER1_type 0 341 41 1239 164 10 0 chr18 46060114 46060315 -39928619 - AluJb SINE Alu -109 203 1 309 174 87 87 chr18 46060347 46060439 -39928495 + MLT1J2 LTR MaLR 340 431 -19 361 340 209 13 chr18 46062445 46062760 -39926174 - L2 LINE L2 -1 3271 2895 375 278 82 109 chr18 46062781 46063083 -39925851 - L2 LINE L2 -397 2917 2625 2095 123 0 36 chr18 46063083 46063392 -39925542 + AluSg SINE Alu 1 298 -12 375 278 82 109 chr18 46063392 46063456 -39925478 - L2 LINE L2 -689 2625 2561 560 118 0 21 chr18 46064207 46064331 -39924603 - AluSg/x SINE Alu 0 309 216 1853 103 0 15 chr18 46064432 46064705 -39924229 + AluY SINE Alu 41 309 -2 271 326 41 14 chr18 46064888 46065035 -39923899 + LTR67 LTR ERVL 398 548 -9 2325 179 53 3 chr18 46066980 46067427 -39921507 + MLT1C LTR MaLR 1 396 0 233 252 24 102 chr18 46067875 46068002 -39920932 - MIR SINE MIR -67 195 79 301 317 92 0 chr18 46069087 46069207 -39919727 - L2 LINE L2 -1 3271 3141 1924 156 10 0 chr18 46069758 46070046 -39918888 + AluSx SINE Alu 1 291 -21 267 189 0 0 chr18 46070049 46070102 -39918832 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 357 43 0 0 chr18 46070104 46070151 -39918783 + (GA)n Simple_repeat Simple_repeat 2 48 0 1326 135 38 45 chr18 46072179 46072446 -39916488 + L1MB1 LINE L1 5827 6091 -77 538 268 0 0 chr18 46072730 46072842 -39916092 + MER81 DNA DNA 1 112 -2 248 313 88 0 chr18 46074899 46074979 -39913955 + L2 LINE L2 3150 3236 -36 282 356 52 7 chr18 46075197 46075332 -39913602 - MIR3 SINE MIR -15 193 53 660 307 75 41 chr18 46076088 46076499 -39912435 + MLT1J1 LTR MaLR 1 425 -21 25 51 0 0 chr18 46076562 46076601 -39912333 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr18 46076708 46076729 -39912205 + AT_rich Low_complexity Low_complexity 1 21 0 473 377 22 4 chr18 46077537 46077768 -39911166 - MIR SINE MIR -27 235 1 23 0 0 0 chr18 46077774 46077797 -39911137 + AT_rich Low_complexity Low_complexity 1 23 0 346 103 41 10 chr18 46078031 46078128 -39910806 + (TATAA)n Simple_repeat Simple_repeat 5 104 0 38 68 0 0 chr18 46078128 46078201 -39910733 + AT_rich Low_complexity Low_complexity 1 73 0 536 82 66 44 chr18 46078205 46078867 -39910067 + (TTATA)n Simple_repeat Simple_repeat 1 676 0 * 618 24 82 29 chr18 46078839 46079009 -39909925 + (TA)n Simple_repeat Simple_repeat 2 180 0 262 108 54 40 chr18 46079010 46079084 -39909850 + (TATAA)n Simple_repeat Simple_repeat 5 79 0 1015 330 71 22 chr18 46079230 46079925 -39909009 - L2 LINE L2 -15 3298 2560 510 100 0 12 chr18 46080115 46080195 -39908739 - MADE1 DNA Mariner 0 80 2 2489 160 21 0 chr18 46080304 46080723 -39908211 + MSTA LTR MaLR 1 428 0 27 62 0 0 chr18 46080833 46080881 -39908053 + AT_rich Low_complexity Low_complexity 1 48 0 195 299 65 37 chr18 46081525 46081632 -39907302 - L2 LINE L2 -809 2505 2396 210 271 163 66 chr18 46082412 46082578 -39906356 - MIR SINE MIR -61 201 20 188 391 36 9 chr18 46083124 46083234 -39905700 + L2 LINE L2 2954 3066 -206 291 313 24 0 chr18 46083455 46083538 -39905396 - MARNA DNA Mariner -31 555 471 413 307 13 27 chr18 46084372 46084522 -39904412 + MIR SINE MIR 79 226 -36 1329 75 32 11 chr18 46085521 46085707 -39903227 - AluSc SINE Alu -119 190 1 286 248 17 120 chr18 46085735 46085852 -39903082 + MIR3 SINE MIR 11 115 -93 186 270 95 0 chr18 46086530 46086593 -39902341 - L2 LINE L2 -685 2629 2561 243 385 62 8 chr18 46087041 46087171 -39901763 + MIR SINE MIR 53 189 -73 300 274 11 21 chr18 46087340 46087435 -39901499 - MLT1H LTR MaLR -9 558 465 548 311 28 36 chr18 46087609 46087857 -39901077 - MLT1H LTR MaLR -244 305 60 2163 122 0 3 chr18 46087968 46088272 -39900662 + AluSx SINE Alu 1 303 -9 620 279 90 71 chr18 46090387 46090619 -39898315 - MLT1E LTR MaLR -126 467 167 569 142 35 26 chr18 46090619 46090732 -39898202 + L1PA8A LINE L1 6018 6131 0 620 279 90 71 chr18 46090732 46090870 -39898064 - MLT1E LTR MaLR -426 167 33 263 319 89 41 chr18 46090953 46091122 -39897812 - MIR3 SINE MIR -11 197 21 276 124 58 0 chr18 46091130 46091194 -39897740 + MIR SINE MIR 116 189 -19 423 314 157 10 chr18 46091632 46091836 -39897098 - MIR SINE MIR -6 256 23 222 380 33 0 chr18 46094291 46094383 -39894551 + MIR SINE MIR 49 143 -65 420 204 9 71 chr18 46094735 46094848 -39894086 - L1M4 LINE L1 -1918 4464 4359 2401 230 83 25 chr18 46094972 46095706 -39893228 - L1MC4 LINE L1 -515 7527 6751 352 305 181 14 chr18 46095799 46096081 -39892853 - L1MEc LINE L1 -4190 2373 2045 528 278 6 3 chr18 46096114 46096304 -39892630 - L1MEc LINE L1 -4529 1907 1671 474 230 18 0 chr18 46096449 46096562 -39892372 + MLT1C LTR MaLR 13 127 -263 5009 142 46 11 chr18 46096562 46097773 -39891161 + L1PA13 LINE L1 4896 6145 -18 987 183 66 98 chr18 46097825 46098142 -39890792 + MLT1C LTR MaLR 161 467 0 371 281 58 21 chr18 46098215 46098561 -39890373 - L1MEc LINE L1 -4984 1400 1046 28 29 0 0 chr18 46098605 46098640 -39890294 + AT_rich Low_complexity Low_complexity 1 35 0 306 299 53 70 chr18 46099135 46099322 -39889612 - L1MEc LINE L1 -6005 558 375 214 250 0 19 chr18 46099723 46099775 -39889159 + GA-rich Low_complexity Low_complexity 3 53 0 455 316 104 47 chr18 46099778 46100095 -39888839 - L2 LINE L2 -64 3249 2915 264 317 72 33 chr18 46100137 46100317 -39888617 - LTR50 LTR ERVL -608 187 1 621 313 75 42 chr18 46100656 46101161 -39887773 - ERVL LTR ERVL -398 5366 4845 2098 135 52 0 chr18 46101532 46101880 -39887054 + MER47A DNA MER2_type 1 366 0 231 380 99 0 chr18 46101963 46102084 -39886850 + MIR3 SINE MIR 13 145 -63 543 333 73 5 chr18 46102107 46102311 -39886623 - MIR SINE MIR 0 262 45 197 344 24 48 chr18 46102740 46102865 -39886069 + MIR3 SINE MIR 4 125 -83 221 281 16 16 chr18 46102870 46102934 -39886000 - MIR3 SINE MIR -41 167 104 241 263 17 76 chr18 46103020 46103138 -39885796 + MIR SINE MIR 112 222 -40 285 306 12 12 chr18 46103711 46103796 -39885138 - MIR SINE MIR -21 241 157 306 326 54 63 chr18 46103947 46104168 -39884766 + L3 LINE CR1 1297 1515 -62 237 273 66 41 chr18 46104380 46104501 -39884433 + L2 LINE L2 2941 3064 -208 220 330 68 11 chr18 46104694 46104782 -39884152 + L2 LINE L2 3153 3245 -27 228 358 0 0 chr18 46104796 46104863 -39884071 + polypurine Low_complexity Low_complexity 4 70 0 319 296 155 7 chr18 46105614 46105756 -39883178 + MIR3 SINE MIR 5 142 -66 291 185 33 0 chr18 46105793 46105885 -39883049 + (TA)n Simple_repeat Simple_repeat 2 96 0 21 57 0 0 chr18 46106134 46106169 -39882765 + AT_rich Low_complexity Low_complexity 1 35 0 683 335 183 19 chr18 46106281 46106724 -39882210 + L3 LINE CR1 758 1323 -254 2230 111 3 0 chr18 46106724 46107022 -39881912 + AluSg1 SINE Alu 1 299 -10 683 335 183 19 chr18 46107022 46107167 -39881767 + L3 LINE CR1 1323 1443 -134 339 212 8 25 chr18 46107210 46107328 -39881606 + GA-rich Low_complexity Low_complexity 2 117 0 351 44 0 0 chr18 46107640 46107685 -39881249 + (TA)n Simple_repeat Simple_repeat 1 45 0 182 264 19 38 chr18 46107826 46107879 -39881055 - L3 LINE CR1 -34 1543 1492 458 284 1 42 chr18 46108066 46108208 -39880726 + MIR SINE MIR 23 158 -63 2194 112 0 16 chr18 46108284 46108589 -39880345 - AluSq SINE Alu -13 300 1 1469 215 141 21 chr18 46109067 46109434 -39879500 + MLT1D LTR MaLR 22 450 -55 279 0 0 0 chr18 46109434 46109465 -39879469 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 1469 215 141 21 chr18 46109465 46109529 -39879405 + MLT1D LTR MaLR 450 505 0 242 312 194 11 chr18 46109824 46109917 -39879017 + MIR3 SINE MIR 7 116 -92 372 22 0 0 chr18 46109921 46109966 -39878968 + (TG)n Simple_repeat Simple_repeat 2 46 0 1429 204 74 33 chr18 46109966 46110303 -39878631 - MLT1C LTR MaLR -9 458 99 1630 218 87 42 chr18 46110303 46110799 -39878135 - MLT2B1 LTR ERVL -2 518 1 1429 204 74 33 chr18 46110799 46110882 -39878052 - MLT1C LTR MaLR -368 99 21 276 347 20 0 chr18 46110992 46111139 -39877795 + MER103 DNA DNA 15 164 -2 2396 61 0 7 chr18 46111317 46111638 -39877296 + AluY SINE Alu 1 319 0 22 0 0 0 chr18 46111663 46111685 -39877249 + AT_rich Low_complexity Low_complexity 1 22 0 231 279 108 36 chr18 46113562 46113673 -39875261 + MIR SINE MIR 136 254 -8 266 267 74 44 chr18 46113737 46113872 -39875062 - L2 LINE L2 0 3313 3175 190 361 14 0 chr18 46114312 46114384 -39874550 + L3 LINE CR1 1493 1565 -12 4384 135 57 99 chr18 46114385 46115553 -39873381 + pTR5 LTR ERV1 741 2025 -413 350 194 31 20 chr18 46115553 46115651 -39873283 + LTR30 LTR ERV1 544 642 -80 1422 104 5 5 chr18 46115653 46115875 -39873059 + pTR5 LTR ERV1 171 392 -2046 316 259 125 36 chr18 46116635 46116747 -39872187 + MIR SINE MIR 23 144 -64 22 35 0 0 chr18 46117574 46117603 -39871331 + AT_rich Low_complexity Low_complexity 1 29 0 368 325 107 34 chr18 46118390 46118744 -39870190 + MLT1I LTR MaLR 1 380 -29 2320 91 0 3 chr18 46119181 46119477 -39869457 + AluSg SINE Alu 1 295 -15 331 333 29 0 chr18 46120005 46120107 -39868827 - L2 LINE L2 0 3272 3168 207 334 57 114 chr18 46120108 46120494 -39868440 + L2 LINE L2 2613 2976 -338 268 313 36 47 chr18 46120609 46120801 -39868133 + L2 LINE L2 3115 3304 -9 233 341 44 0 chr18 46121123 46121214 -39867720 + MIR3 SINE MIR 60 154 -54 202 243 57 43 chr18 46121271 46121341 -39867593 + MER5B DNA MER1_type 92 162 -16 384 147 0 0 chr18 46121538 46121613 -39867321 + (TG)n Simple_repeat Simple_repeat 2 76 0 1191 166 26 37 chr18 46171734 46172005 -39816929 - Tigger2a DNA MER2_type -166 268 1 246 222 32 0 chr18 46173596 46173659 -39815275 + (TA)n Simple_repeat Simple_repeat 1 65 0 233 228 13 51 chr18 46174141 46174220 -39814714 - MIR SINE MIR 0 262 187 277 336 16 16 chr18 46175656 46175778 -39813156 - MIR SINE MIR -67 141 20 796 160 7 0 chr18 46175912 46176062 -39812872 - L1MA5 LINE L1 0 6300 6150 23 33 0 0 chr18 46176235 46176265 -39812669 + AT_rich Low_complexity Low_complexity 1 30 0 1347 263 81 16 chr18 46176443 46177009 -39811925 - L1MC4a LINE L1 -1889 5919 5317 964 260 34 34 chr18 46177434 46177808 -39811126 - MLT1A2 LTR MaLR -2 465 1 191 231 0 0 chr18 46178765 46178804 -39810130 - MIR SINE MIR -62 146 108 187 425 8 15 chr18 46180702 46180836 -39808098 - MIR SINE MIR -123 139 7 2132 113 0 7 chr18 46180882 46181175 -39807759 - AluSx SINE Alu -21 291 1 432 283 92 23 chr18 46182564 46182737 -39806197 - MLT1J LTR MaLR -302 209 25 2235 118 0 22 chr18 46183241 46183555 -39805379 - AluSc SINE Alu 0 309 3 21 21 0 64 chr18 46183654 46183701 -39805233 + AT_rich Low_complexity Low_complexity 1 44 0 208 158 0 26 chr18 46183904 46183942 -39804992 + CT-rich Low_complexity Low_complexity 4 40 0 284 363 0 0 chr18 46183955 46184035 -39804899 + L2 LINE L2 3146 3225 -47 21 0 0 0 chr18 46184139 46184160 -39804774 + AT_rich Low_complexity Low_complexity 1 21 0 489 229 62 62 chr18 46184378 46184736 -39804198 - L1MCa LINE L1 -2948 3478 3121 797 169 0 22 chr18 46184850 46184986 -39803948 - FLAM_C SINE Alu 0 133 1 419 319 111 35 chr18 46185014 46185459 -39803475 - L1MCa LINE L1 -5000 1429 791 697 210 65 3 chr18 46185465 46185687 -39803247 - L1MA4 LINE L1 -90 6215 5982 233 271 0 14 chr18 46186453 46186523 -39802411 - L1MCa LINE L1 -6299 308 240 30 0 0 0 chr18 46188654 46188684 -39800250 + AT_rich Low_complexity Low_complexity 1 30 0 27 0 0 0 chr18 46188834 46188861 -39800073 + AT_rich Low_complexity Low_complexity 1 27 0 360 0 0 0 chr18 46188899 46188939 -39799995 + (T)n Simple_repeat Simple_repeat 1 40 0 467 259 9 26 chr18 46189081 46189197 -39799737 - MER81 DNA DNA 0 114 1 1552 213 15 0 chr18 46190624 46190957 -39797977 + MER58B DNA MER1_type 3 340 -1 183 80 0 0 chr18 46190995 46191020 -39797914 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2186 126 0 19 chr18 46191849 46192166 -39796768 + AluSx SINE Alu 2 312 0 188 310 70 39 chr18 46192322 46192451 -39796483 + MIR3 SINE MIR 31 163 -45 292 241 158 30 chr18 46192507 46192640 -39796294 - MIR SINE MIR -1 261 112 194 304 80 36 chr18 46194155 46194281 -39794653 + MIR3 SINE MIR 6 140 -68 186 43 0 0 chr18 46194281 46194304 -39794630 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 194 304 80 36 chr18 46194304 46194315 -39794619 + MIR3 SINE MIR 140 149 -59 219 261 0 0 chr18 46194926 46194972 -39793962 - MIR SINE MIR -146 62 17 242 250 100 50 chr18 46194989 46195129 -39793805 + MIR SINE MIR 81 227 -35 180 0 0 0 chr18 46195349 46195369 -39793565 + (T)n Simple_repeat Simple_repeat 1 20 0 287 283 135 13 chr18 46196330 46196567 -39792367 - L1ME LINE L1 -331 5790 5525 1326 182 8 36 chr18 46197512 46197765 -39791169 - AluJo SINE Alu -66 246 1 227 114 23 0 chr18 46198069 46198113 -39790821 + (TA)n Simple_repeat Simple_repeat 2 46 0 2075 117 3 3 chr18 46198358 46198665 -39790269 - AluSx SINE Alu -5 307 1 1274 277 94 21 chr18 46198665 46199285 -39789649 - L2 LINE L2 -10 3303 2653 279 54 0 0 chr18 46199399 46199436 -39789498 + (TC)n Simple_repeat Simple_repeat 2 38 0 254 223 62 40 chr18 46202140 46202221 -39786713 - MIR SINE MIR -60 148 69 241 234 0 0 chr18 46202387 46202434 -39786500 + MIR SINE MIR 206 252 -10 1931 88 23 33 chr18 46202438 46202744 -39786190 + AluSq SINE Alu 1 303 -10 22 35 0 0 chr18 46202762 46202791 -39786143 + AT_rich Low_complexity Low_complexity 1 29 0 338 207 0 0 chr18 46203101 46203159 -39785775 - MER2 DNA MER2_type -280 65 8 261 0 0 0 chr18 46203503 46203532 -39785402 + (TA)n Simple_repeat Simple_repeat 2 30 0 201 154 0 0 chr18 46203588 46203627 -39785307 + (TG)n Simple_repeat Simple_repeat 1 39 0 56 29 0 0 chr18 46203734 46203804 -39785130 + GC_rich Low_complexity Low_complexity 1 70 0 21 82 0 0 chr18 46203976 46204025 -39784909 + GC_rich Low_complexity Low_complexity 1 49 0 240 224 0 40 chr18 46205581 46205657 -39783277 + CT-rich Low_complexity Low_complexity 3 75 0 21 0 0 0 chr18 46208199 46208220 -39780714 + AT_rich Low_complexity Low_complexity 1 21 0 2208 90 0 0 chr18 46208220 46208509 -39780425 - AluSq SINE Alu -24 289 1 189 302 221 0 chr18 46208950 46209036 -39779898 - MIR SINE MIR -98 164 60 484 251 43 72 chr18 46209046 46209253 -39779681 + MIR SINE MIR 5 205 -57 1830 94 80 7 chr18 46212040 46212316 -39776618 - AluSg SINE Alu -14 296 1 318 125 38 0 chr18 46213440 46213520 -39775414 + CT-rich Low_complexity Low_complexity 2 84 0 781 148 0 13 chr18 46213600 46213749 -39775185 + (TTCC)n Simple_repeat Simple_repeat 3 149 0 1545 150 13 62 chr18 46213751 46214058 -39774876 - AluJo SINE Alu 0 312 21 2160 92 3 3 chr18 46215192 46215495 -39773439 - AluY SINE Alu -8 303 1 230 345 193 0 chr18 46215522 46215641 -39773293 - L3 LINE CR1 -76 1501 1360 741 341 39 44 chr18 46215646 46216059 -39772875 - L3 LINE CR1 -354 1223 813 216 273 36 0 chr18 46216325 46216380 -39772554 + L2 LINE L2 3174 3230 -83 2108 102 0 10 chr18 46216445 46216740 -39772194 - AluSx SINE Alu -20 292 1 209 200 0 0 chr18 46216842 46216877 -39772057 + (TG)n Simple_repeat Simple_repeat 1 35 0 257 261 23 131 chr18 46217198 46217328 -39771606 - MIR SINE MIR -60 148 33 189 244 0 0 chr18 46217757 46217798 -39771136 + MIR SINE MIR 38 78 -130 1868 134 7 0 chr18 46218794 46219092 -39769842 - AluSx SINE Alu -4 308 9 398 283 53 26 chr18 46219207 46219359 -39769575 - MIR SINE MIR -35 227 72 216 67 0 0 chr18 46220153 46220183 -39768751 + (TG)n Simple_repeat Simple_repeat 1 30 0 222 37 0 0 chr18 46220877 46220904 -39768030 + (TTA)n Simple_repeat Simple_repeat 1 27 0 1305 212 11 18 chr18 46220914 46221188 -39767746 - AluJb SINE Alu -40 272 1 214 280 64 24 chr18 46222325 46222450 -39766484 + MIR3 SINE MIR 78 207 -1 342 295 79 61 chr18 46222562 46222764 -39766170 + MIR SINE MIR 6 181 -27 214 346 13 0 chr18 46223192 46223270 -39765664 - L3 LINE CR1 -7 1570 1492 2372 119 24 19 chr18 46223380 46223751 -39765183 - THE1C LTR MaLR -2 373 1 336 262 118 80 chr18 46224082 46224269 -39764665 - MIR SINE MIR -49 213 20 264 218 126 23 chr18 46225599 46225686 -39763248 - MIR SINE MIR -63 145 50 246 346 59 0 chr18 46225978 46226079 -39762855 - L2 LINE L2 -7 3306 3200 275 348 51 67 chr18 46226134 46226387 -39762547 - L3 LINE CR1 -109 1468 1220 267 316 26 0 chr18 46226428 46226542 -39762392 - MIR3 SINE MIR 0 208 92 315 307 33 20 chr18 46226626 46226776 -39762158 - L3 LINE CR1 -489 1088 937 227 291 0 0 chr18 46226790 46226845 -39762089 + MER5B DNA MER1_type 1 55 -123 370 351 130 0 chr18 46226847 46227001 -39761933 + MER5B DNA MER1_type 4 177 -1 2204 114 0 0 chr18 46227178 46227518 -39761416 + AluSc SINE Alu 1 340 0 478 303 45 8 chr18 46228038 46228170 -39760764 + L2 LINE L2 3129 3265 -7 388 281 36 14 chr18 46228512 46228651 -39760283 + L1MCa LINE L1 1922 2063 -4363 1880 159 55 3 chr18 46228654 46228981 -39759953 - MER7A DNA MER2_type 0 346 5 261 0 0 0 chr18 46228982 46229011 -39759923 + (CA)n Simple_repeat Simple_repeat 2 30 0 274 276 200 7 chr18 46229126 46229271 -39759663 + MIR3 SINE MIR 30 202 -6 29 0 0 0 chr18 46230510 46230539 -39758395 + AT_rich Low_complexity Low_complexity 1 29 0 201 130 0 56 chr18 46231177 46231231 -39757703 + (CGGGGG)n Simple_repeat Simple_repeat 1 51 0 246 62 0 0 chr18 46231238 46231270 -39757664 + (CGG)n Simple_repeat Simple_repeat 3 34 0 327 113 0 0 chr18 46231425 46231478 -39757456 + (A)n Simple_repeat Simple_repeat 1 53 0 229 320 10 21 chr18 46231727 46231824 -39757110 - L2 LINE L2 -216 3056 2961 231 182 195 26 chr18 46233047 46233124 -39755810 - MIR SINE MIR -72 136 47 515 290 49 11 chr18 46233203 46233386 -39755548 + MIR SINE MIR 29 218 -44 439 285 24 48 chr18 46233867 46234032 -39754902 - MIR3 SINE MIR -16 192 32 379 200 152 61 chr18 46234282 46234447 -39754487 - MIR SINE MIR -18 244 65 243 314 0 0 chr18 46234590 46234641 -39754293 - L2 LINE L2 -86 3186 3136 241 315 83 58 chr18 46234766 46235007 -39753927 - L2 LINE L2 -213 3059 2813 446 252 9 113 chr18 46235277 46235507 -39753427 - L2 LINE L2 -2 3311 3106 720 231 36 102 chr18 46236188 46236302 -39752632 + MER63A DNA MER1_type 1 94 -1594 1936 97 0 0 chr18 46236302 46236561 -39752373 - AluSq SINE Alu -50 263 5 720 231 36 102 chr18 46236561 46236671 -39752263 + MER63A DNA MER1_type 94 210 0 485 319 58 29 chr18 46237189 46237638 -39751296 + HAL1b LINE L1 77 538 -810 23 33 0 0 chr18 46237856 46237886 -39751048 + AT_rich Low_complexity Low_complexity 1 30 0 205 299 207 0 chr18 46237930 46238017 -39750917 - MIR SINE MIR -68 140 36 339 327 25 44 chr18 46238177 46238336 -39750598 - L2 LINE L2 -1 3271 3116 432 276 94 0 chr18 46238393 46238520 -39750414 - MER5A DNA MER1_type 0 189 51 216 356 11 11 chr18 46238843 46238930 -39750004 - MIR SINE MIR -103 105 19 189 327 0 0 chr18 46239931 46239983 -39748951 - L2 LINE L2 0 3272 3221 181 395 37 26 chr18 46240278 46240630 -39748304 + L2 LINE L2 2622 2977 -337 296 347 29 83 chr18 46241529 46241771 -39747163 - L3 LINE CR1 -8 1569 1341 265 295 151 14 chr18 46244452 46244591 -39744343 + MIR3 SINE MIR 40 197 -11 896 85 78 0 chr18 46247309 46247438 -39741496 + MER85 DNA T2_type 1 139 0 423 248 47 47 chr18 46247670 46247799 -39741135 - MIR3 SINE MIR -12 196 68 491 271 68 40 chr18 46250650 46250901 -39738033 - MIR SINE MIR 0 262 5 297 0 0 0 chr18 46251489 46251522 -39737412 + (TG)n Simple_repeat Simple_repeat 2 34 0 229 295 31 39 chr18 46252983 46253112 -39735822 - L2 LINE L2 -213 3059 2932 894 272 29 0 chr18 46253235 46253478 -39735456 - MIR SINE MIR -5 257 8 256 389 92 11 chr18 46253530 46253964 -39734970 - L2 LINE L2 -575 2739 2271 765 238 83 95 chr18 46255124 46255607 -39733327 - MLT1H1 LTR MaLR 0 555 79 324 70 0 0 chr18 46255934 46255977 -39732957 + (CA)n Simple_repeat Simple_repeat 2 44 0 297 240 15 135 chr18 46259557 46259757 -39729177 + MIR3 SINE MIR 32 207 -1 1699 173 22 7 chr18 46260404 46260681 -39728253 + AluJo SINE Alu 1 281 -31 270 303 11 11 chr18 46261268 46261357 -39727577 + L2 LINE L2 3184 3272 0 330 328 62 0 chr18 46261851 46261979 -39726955 + MIR3 SINE MIR 31 166 -42 227 276 0 0 chr18 46261992 46262050 -39726884 + L3 LINE CR1 1392 1449 -128 2392 96 0 0 chr18 46262797 46263100 -39725834 + AluSx SINE Alu 5 307 -5 1741 186 78 55 chr18 46263140 46263628 -39725306 - MLT1D LTR MaLR -6 499 1 192 289 74 58 chr18 46264713 46264834 -39724100 + MIR SINE MIR 124 246 -16 421 324 63 0 chr18 46265420 46265562 -39723372 - L2 LINE L2 -1 3271 3121 206 333 30 0 chr18 46266493 46266592 -39722342 - MIR SINE MIR -73 135 34 376 264 12 0 chr18 46267238 46267401 -39721533 + CT-rich Low_complexity Low_complexity 1 165 0 192 77 0 0 chr18 46267444 46267470 -39721464 + (TC)n Simple_repeat Simple_repeat 2 27 0 192 40 0 0 chr18 46269071 46269096 -39719838 + (A)n Simple_repeat Simple_repeat 1 25 0 204 288 41 0 chr18 46269528 46269601 -39719333 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 349 333 9 0 chr18 46269670 46269781 -39719153 + MIR SINE MIR 30 141 -67 225 158 0 0 chr18 46270636 46270674 -39718260 + MIR SINE MIR 221 258 -4 189 323 0 31 chr18 46270891 46270956 -39717978 + L2 LINE L2 3201 3263 -9 277 296 29 47 chr18 46271681 46271853 -39717081 - MIR3 SINE MIR -24 184 16 393 304 34 0 chr18 46272018 46272166 -39716768 + MER103 DNA DNA 1 153 -13 353 105 0 47 chr18 46272437 46272523 -39716411 + (GGAA)n Simple_repeat Simple_repeat 4 85 0 247 231 115 0 chr18 46273999 46274077 -39714857 - HsTC2 DNA Tc2 -1811 87 1 1892 180 24 34 chr18 46274444 46274822 -39714112 - MLT1A2 LTR MaLR 0 374 1 1325 225 74 21 chr18 46276050 46276388 -39712546 - MLT1A2 LTR MaLR -1 373 18 259 287 66 19 chr18 46277255 46277408 -39711526 - MIR SINE MIR -39 169 5 283 324 40 34 chr18 46278256 46278432 -39710502 - L3 LINE CR1 -157 1420 1244 244 366 103 5 chr18 46278691 46278885 -39710049 - L3 LINE CR1 -783 794 582 2178 176 35 115 chr18 46279533 46280135 -39708799 + MLT2B3 LTR ERVL 1 554 0 282 136 30 45 chr18 46280158 46280224 -39708710 + LTR49 LTR ERV1 459 523 -72 2149 116 0 13 chr18 46280235 46280538 -39708396 + AluSc SINE Alu 1 299 -10 447 164 21 107 chr18 46280538 46280667 -39708267 + MER103 DNA DNA 47 165 -1 389 260 226 14 chr18 46281884 46282092 -39706842 - MIR SINE MIR -3 259 8 2546 57 0 0 chr18 46282686 46282983 -39705951 - AluY SINE Alu -14 297 1 405 259 37 111 chr18 46284105 46284294 -39704640 + MER5B DNA MER1_type 4 178 0 1456 186 24 0 chr18 46285437 46285727 -39703207 - L1MA6 LINE L1 -4 6296 6000 190 359 75 19 chr18 46286134 46286240 -39702694 - MIR SINE MIR -77 131 20 208 292 54 15 chr18 46286456 46286586 -39702348 + L2 LINE L2 2921 3055 -258 207 289 49 28 chr18 46286948 46287090 -39701844 + L2 LINE L2 2921 3065 -248 952 235 114 10 chr18 46288506 46288812 -39700122 + L2 LINE L2 1947 2284 -1030 593 313 151 5 chr18 46288818 46289181 -39699753 + L2 LINE L2 2669 3086 -227 196 29 0 57 chr18 46289217 46289252 -39699682 + (TTC)n Simple_repeat Simple_repeat 2 34 0 2139 114 10 3 chr18 46289258 46289564 -39699370 - AluY SINE Alu -3 308 1 661 219 65 35 chr18 46289571 46289772 -39699162 + L2 LINE L2 3101 3307 -6 215 197 53 40 chr18 46291064 46291140 -39697794 + MIR SINE MIR 77 153 -109 1815 164 28 45 chr18 46291140 46291484 -39697450 + L1MB3 LINE L1 5794 6132 -51 638 216 8 0 chr18 46291484 46291609 -39697325 + FLAM_A SINE Alu 1 126 -7 1815 164 28 45 chr18 46291609 46291661 -39697273 + L1MB3 LINE L1 6132 6183 0 497 277 24 61 chr18 46291783 46291996 -39696938 + L3 LINE CR1 1261 1465 -112 255 103 35 17 chr18 46293166 46293224 -39695710 + (TG)n Simple_repeat Simple_repeat 1 59 0 216 0 0 0 chr18 46295371 46295395 -39693539 + (TTTTTG)n Simple_repeat Simple_repeat 3 26 0 443 255 0 0 chr18 46295889 46295983 -39692951 + MER5A DNA MER1_type 29 122 -67 306 277 20 20 chr18 46295894 46295995 -39692939 - MER5A DNA MER1_type -22 167 67 * 425 329 88 9 chr18 46297443 46297659 -39691275 + MIR SINE MIR 28 260 -2 327 25 0 0 chr18 46298586 46298626 -39690308 + (TC)n Simple_repeat Simple_repeat 2 41 0 297 0 0 0 chr18 46298631 46298664 -39690270 + (TG)n Simple_repeat Simple_repeat 2 34 0 339 149 0 0 chr18 46299137 46299211 -39689723 + (TG)n Simple_repeat Simple_repeat 2 75 0 188 304 26 43 chr18 46299420 46299535 -39689399 - L3 LINE CR1 -1 1576 1464 * 192 392 0 0 chr18 46299523 46299597 -39689337 - MIR SINE MIR -173 89 16 259 375 59 17 chr18 46299969 46300206 -39688728 - L2 LINE L2 -2 3270 3024 201 353 16 49 chr18 46300560 46300682 -39688252 - MIR3 SINE MIR 0 208 91 1463 151 0 5 chr18 46301826 46302044 -39686890 + AluJo SINE Alu 1 217 -95 231 178 0 0 chr18 46302045 46302090 -39686844 + AluJo SINE Alu 249 293 -8 299 167 15 0 chr18 46304360 46304426 -39684508 + GA-rich Low_complexity Low_complexity 2 68 0 471 155 0 0 chr18 46304704 46304788 -39684146 + (CA)n Simple_repeat Simple_repeat 2 85 0 447 292 37 113 chr18 46305402 46306097 -39682837 - L2 LINE L2 0 3272 2638 401 136 0 12 chr18 46306241 46306322 -39682612 + (TC)n Simple_repeat Simple_repeat 2 81 0 284 269 26 0 chr18 46306349 46306427 -39682507 + L2 LINE L2 3193 3272 0 220 354 82 0 chr18 46306539 46306697 -39682237 + MIR3 SINE MIR 37 207 -1 229 79 0 0 chr18 46307714 46307752 -39681182 - L1MA3 LINE L1 -3 6302 6265 301 350 11 54 chr18 46308451 46308637 -39680297 - MIR SINE MIR -56 206 29 558 322 111 31 chr18 46309115 46309528 -39679406 + L2 LINE L2 2852 3297 -16 192 422 12 12 chr18 46309563 46309646 -39679288 - MIR SINE MIR -110 98 16 2873 16 0 0 chr18 46312365 46312678 -39676256 + AluYb8 SINE Alu 1 313 -5 1975 154 0 22 chr18 46313576 46313895 -39675039 - AluJb SINE Alu 0 312 1 348 350 89 6 chr18 46313972 46314152 -39674782 + MIR3 SINE MIR 8 202 -6 486 233 119 25 chr18 46315421 46315580 -39673354 - MER5B DNA MER1_type -4 174 1 25 0 0 0 chr18 46315719 46315744 -39673190 + AT_rich Low_complexity Low_complexity 1 25 0 822 222 28 0 chr18 46315940 46316120 -39672814 + MER20 DNA MER1_type 33 217 -2 225 182 23 0 chr18 46316197 46316241 -39672693 + (CA)n Simple_repeat Simple_repeat 2 46 0 285 89 0 0 chr18 46316513 46316558 -39672376 + (GA)n Simple_repeat Simple_repeat 1 45 0 249 354 123 5 chr18 46316742 46316937 -39671997 + MIR SINE MIR 32 249 -13 225 225 0 0 chr18 46317996 46318036 -39670898 + MIR SINE MIR 114 153 -55 514 233 22 33 chr18 46318043 46318223 -39670711 - MER5B DNA MER1_type 0 178 1 914 188 11 0 chr18 46318231 46318412 -39670522 + MER5A DNA MER1_type 1 183 -6 244 299 28 47 chr18 46319309 46319416 -39669518 - MIR3 SINE MIR -22 186 82 447 231 71 35 chr18 46321196 46321365 -39667569 - MER5B DNA MER1_type 0 178 4 261 242 0 0 chr18 46321367 46321429 -39667505 - MIR3 SINE MIR -47 161 100 213 333 0 9 chr18 46321469 46321574 -39667360 - L3 LINE CR1 -310 1267 1164 270 136 0 0 chr18 46321603 46321647 -39667287 + (CA)n Simple_repeat Simple_repeat 2 45 0 360 246 90 30 chr18 46323067 46323201 -39665733 - MIR3 SINE MIR -7 201 60 594 283 74 74 chr18 46324328 46324706 -39664228 - LTR33 LTR ERVL -88 433 56 3963 43 2 6 chr18 46325599 46326082 -39662852 + L1PA5 LINE L1 5671 6151 -3 224 278 0 0 chr18 46326356 46326410 -39662524 + (TG)n Simple_repeat Simple_repeat 2 55 0 207 235 0 37 chr18 46328475 46328556 -39660378 + T-rich Low_complexity Low_complexity 3 80 0 24 0 0 0 chr18 46330028 46330052 -39658882 + AT_rich Low_complexity Low_complexity 1 24 0 306 87 0 0 chr18 46330273 46330319 -39658615 + (TG)n Simple_repeat Simple_repeat 2 47 0 207 0 0 0 chr18 46331491 46331514 -39657420 + (T)n Simple_repeat Simple_repeat 1 23 0 528 242 45 67 chr18 46331514 46331692 -39657242 - FAM SINE Alu 0 49 1 898 206 50 0 chr18 46331928 46332088 -39656846 - FAM SINE Alu -7 168 1 207 0 0 0 chr18 46332723 46332746 -39656188 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 352 247 241 6 chr18 46333349 46333515 -39655419 + LTR33 LTR ERVL 314 518 -3 213 301 14 14 chr18 46335549 46335622 -39653312 + MIR3 SINE MIR 129 201 -7 214 368 85 0 chr18 46336240 46336346 -39652588 - MIR3 SINE MIR -54 154 40 181 244 85 24 chr18 46338790 46338872 -39650062 + MIR3 SINE MIR 115 201 -7 182 278 19 0 chr18 46341022 46341076 -39647858 - MIR SINE MIR -72 136 82 251 290 54 0 chr18 46341100 46341193 -39647741 + MIR3 SINE MIR 109 206 -2 182 310 23 23 chr18 46342513 46342600 -39646334 - MIR SINE MIR -78 130 44 2231 101 0 3 chr18 46342666 46342962 -39645972 + AluSg SINE Alu 11 305 -5 217 330 10 21 chr18 46343333 46343430 -39645504 - MIR SINE MIR -146 116 21 366 261 34 8 chr18 46343537 46343656 -39645278 - MIR3 SINE MIR 0 208 87 306 50 0 0 chr18 46343993 46344033 -39644901 + (CA)n Simple_repeat Simple_repeat 2 41 0 318 26 0 0 chr18 46344223 46344262 -39644672 + (TG)n Simple_repeat Simple_repeat 2 40 0 307 255 39 59 chr18 46345956 46346058 -39642876 + L2 LINE L2 3160 3259 -13 183 318 0 0 chr18 46346074 46346118 -39642816 - L2 LINE L2 -86 3186 3143 229 300 146 15 chr18 46346324 46346454 -39642480 + MIR3 SINE MIR 5 151 -57 377 328 15 0 chr18 46346971 46347102 -39641832 + L3 LINE CR1 1292 1424 -153 1743 116 94 4 chr18 46348122 46348389 -39640545 + AluSx SINE Alu 1 291 -21 232 284 0 15 chr18 46349993 46350060 -39638874 + GA-rich Low_complexity Low_complexity 4 69 0 458 332 84 5 chr18 46351078 46351310 -39637624 + MIR SINE MIR 4 254 -8 312 290 76 28 chr18 46353268 46353413 -39635521 - MARNA DNA Mariner -34 552 401 1391 224 46 35 chr18 46353911 46354281 -39634653 + MLT1A2 LTR MaLR 1 374 0 261 255 85 28 chr18 46355339 46355445 -39633489 + MER103 DNA DNA 13 124 -42 377 305 51 15 chr18 46356888 46357085 -39631849 + MIR SINE MIR 59 262 0 21 0 0 0 chr18 46357125 46357146 -39631788 + AT_rich Low_complexity Low_complexity 1 21 0 344 304 17 0 chr18 46357681 46357796 -39631138 - MER5A DNA MER1_type -70 119 3 408 246 162 42 chr18 46358463 46358605 -39630329 + MER5A DNA MER1_type 20 178 -11 200 278 30 83 chr18 46359989 46360122 -39628812 - L2 LINE L2 -10 3262 3137 273 176 29 0 chr18 46360878 46360946 -39627988 + MER53 DNA DNA 120 189 0 224 276 11 46 chr18 46361016 46361103 -39627831 - MIR SINE MIR -67 141 58 324 70 0 0 chr18 46361826 46361869 -39627065 + (CACTC)n Simple_repeat Simple_repeat 3 45 0 249 33 0 0 chr18 46364749 46364779 -39624155 + (CTG)n Simple_repeat Simple_repeat 3 32 0 604 275 6 34 chr18 46366108 46366286 -39622648 - MER5B DNA MER1_type 0 178 6 184 301 53 53 chr18 46366309 46366354 -39622580 - MIR SINE MIR -70 138 94 2483 193 69 15 chr18 46366354 46366889 -39622045 - MLT1F1 LTR MaLR 0 567 4 184 301 53 53 chr18 46366889 46366956 -39621978 - MIR SINE MIR -113 95 26 367 278 96 9 chr18 46368569 46368684 -39620250 + Charlie8 DNA MER1_type 1 125 -2292 279 133 0 0 chr18 46369673 46369718 -39619216 + (CA)n Simple_repeat Simple_repeat 1 45 0 208 371 10 0 chr18 46369854 46369951 -39618983 - MIR SINE MIR -136 126 29 1321 148 62 8 chr18 46371610 46371867 -39617067 - L1MB7 LINE L1 -16 6168 5898 202 213 0 21 chr18 46371999 46372046 -39616888 + L2 LINE L2 3221 3266 -6 697 256 81 78 chr18 46372932 46373315 -39615619 - L2 LINE L2 -5 3308 2925 247 323 0 11 chr18 46373314 46373407 -39615527 + MER5B DNA MER1_type 9 100 -78 * 288 0 0 0 chr18 46373418 46373450 -39615484 + (TG)n Simple_repeat Simple_repeat 2 33 0 320 333 42 11 chr18 46373514 46373703 -39615231 - L2 LINE L2 -410 2904 2710 442 370 12 12 chr18 46374651 46374824 -39614110 + MIR3 SINE MIR 10 182 -26 225 0 0 0 chr18 46375015 46375040 -39613894 + (GA)n Simple_repeat Simple_repeat 1 25 0 420 307 109 5 chr18 46375040 46375232 -39613702 + MIR SINE MIR 50 261 -1 2358 119 0 0 chr18 46375705 46376015 -39612919 - AluSx SINE Alu -1 311 2 255 61 0 0 chr18 46376454 46376487 -39612447 + (CAT)n Simple_repeat Simple_repeat 3 35 0 201 355 0 0 chr18 46376921 46376983 -39611951 + CT-rich Low_complexity Low_complexity 2 63 0 181 322 0 17 chr18 46378007 46378066 -39610868 - MIR SINE MIR -62 146 89 215 167 39 115 chr18 46378825 46378903 -39610031 - MIR SINE MIR -78 184 113 287 294 16 56 chr18 46378998 46379124 -39609810 - MIR SINE MIR -71 137 17 492 322 38 53 chr18 46379140 46379537 -39609397 + L2 LINE L2 2897 3287 -26 299 264 84 22 chr18 46379879 46380057 -39608877 + L2 LINE L2 2333 2521 -793 722 285 78 29 chr18 46380204 46380615 -39608319 + L2 LINE L2 2805 3235 -78 218 81 27 0 chr18 46380635 46380672 -39608262 + (TTTTTG)n Simple_repeat Simple_repeat 3 40 0 804 231 60 5 chr18 46380890 46381089 -39607845 - MER63A DNA MER1_type 0 210 1 289 250 176 23 chr18 46381513 46381689 -39607245 + L3 LINE CR1 1338 1540 -37 22 0 0 0 chr18 46383912 46383934 -39605000 + AT_rich Low_complexity Low_complexity 1 22 0 462 170 0 0 chr18 46384339 46384433 -39604501 + GA-rich Low_complexity Low_complexity 1 94 0 401 295 54 26 chr18 46384796 46385008 -39603926 + MIR SINE MIR 7 230 -32 2054 154 3 3 chr18 46385810 46386122 -39602812 + AluSq SINE Alu 1 312 -1 1838 126 30 7 chr18 46386572 46386843 -39602091 - AluY SINE Alu 0 311 35 204 256 70 47 chr18 46388235 46388321 -39600613 - MIR SINE MIR -64 144 57 216 0 0 0 chr18 46388329 46388353 -39600581 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 259 198 58 35 chr18 46388693 46388779 -39600155 + MIR3 SINE MIR 93 180 -28 181 237 119 0 chr18 46391582 46391641 -39597293 - L2 LINE L2 0 3313 3248 324 331 61 17 chr18 46392364 46392545 -39596389 + MIR SINE MIR 20 208 -54 236 340 64 11 chr18 46392858 46392952 -39595982 + L2 LINE L2 3127 3225 -47 1991 114 0 0 chr18 46393757 46394012 -39594922 + AluSp SINE Alu 1 255 -58 279 0 0 0 chr18 46394012 46394043 -39594891 + (GA)n Simple_repeat Simple_repeat 1 31 0 255 31 0 0 chr18 46394042 46394074 -39594860 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 * 419 238 110 12 chr18 46397530 46397694 -39591240 - L1ME4a LINE L1 0 6121 5942 237 321 66 22 chr18 46398547 46398684 -39590250 + MIR SINE MIR 64 206 -56 467 184 0 0 chr18 46399186 46399262 -39589672 + MER63 DNA MER1_type 674 749 -313 522 251 32 41 chr18 46399409 46399628 -39589306 - L1MC5 LINE L1 -184 7777 7561 2172 98 3 35 chr18 46400537 46400853 -39588081 + AluSc SINE Alu 1 306 -3 757 277 59 29 chr18 46400953 46401191 -39587743 - MIR SINE MIR -11 251 7 516 259 54 0 chr18 46401702 46401849 -39587085 - MER5B DNA MER1_type -6 172 18 197 305 61 24 chr18 46402117 46402199 -39586735 - MIR SINE MIR -106 102 18 308 270 210 0 chr18 46402423 46402523 -39586411 + MER5C DNA MER1_type 4 124 -200 217 296 65 9 chr18 46402550 46402658 -39586276 + MER5C DNA MER1_type 211 324 0 201 300 0 14 chr18 46403527 46403597 -39585337 + MIR3 SINE MIR 140 208 0 640 241 132 9 chr18 46404544 46404764 -39584170 + MIR SINE MIR 5 251 -11 2586 162 14 16 chr18 46405788 46406215 -39582719 - MSTB LTR MaLR 0 426 1 266 272 42 103 chr18 46409006 46409176 -39579758 - MIR3 SINE MIR -62 146 10 214 324 62 35 chr18 46409207 46409352 -39579582 + L3 LINE CR1 1241 1389 -188 413 348 49 1 chr18 46409456 46409662 -39579272 + MIR SINE MIR 37 250 -12 288 278 106 7 chr18 46410201 46410352 -39578582 - L1ME4a LINE L1 -7 6114 5949 234 356 44 0 chr18 46410425 46410515 -39578419 + MIR SINE MIR 50 143 -65 230 271 59 8 chr18 46410582 46410700 -39578234 + MER103 DNA DNA 11 134 -32 201 39 0 0 chr18 46411141 46411167 -39577767 + (A)n Simple_repeat Simple_repeat 1 26 0 217 316 68 17 chr18 46411457 46411574 -39577360 + MIR3 SINE MIR 73 195 -13 351 0 0 0 chr18 46412053 46412092 -39576842 + (TTA)n Simple_repeat Simple_repeat 1 39 0 437 290 150 5 chr18 46412327 46412534 -39576400 + MIR SINE MIR 20 256 -6 1506 159 28 62 chr18 46415244 46415565 -39573369 - L1MA8 LINE L1 0 6291 5982 415 259 35 69 chr18 46416057 46416231 -39572703 - MIR SINE MIR -88 174 7 2129 132 75 32 chr18 46416251 46416599 -39572335 - THE1B LTR MaLR -1 363 1 213 250 21 0 chr18 46416683 46416731 -39572203 - L2 LINE L2 -3 3310 3262 1041 336 59 30 chr18 46417848 46418422 -39570512 - L3 LINE CR1 -87 1490 900 710 278 39 26 chr18 46418548 46418782 -39570152 - MIR SINE MIR -10 252 16 197 254 84 14 chr18 46418799 46418870 -39570064 - MIR3 SINE MIR -122 86 11 441 194 59 132 chr18 46418936 46419209 -39569725 - MER112 DNA MER1_type -3 253 1 1456 165 23 35 chr18 46420166 46420427 -39568507 + AluJo SINE Alu 37 294 -18 334 129 43 0 chr18 46420446 46420516 -39568418 + GA-rich Low_complexity Low_complexity 3 75 0 22 35 0 0 chr18 46420973 46421002 -39567932 + AT_rich Low_complexity Low_complexity 1 29 0 462 253 163 99 chr18 46421366 46421680 -39567254 - L3 LINE CR1 -8 1569 1218 1594 129 173 0 chr18 46421680 46421935 -39566999 - AluSc SINE Alu 0 299 1 462 253 163 99 chr18 46421935 46422062 -39566872 - L3 LINE CR1 -359 1218 1100 185 333 0 0 chr18 46422068 46422122 -39566812 - L3 LINE CR1 -1018 559 506 197 287 24 144 chr18 46423509 46423676 -39565258 - MER5B DNA MER1_type -7 171 25 799 233 41 6 chr18 46424726 46424898 -39564036 + MER45A DNA AcHobo 1 178 0 23 78 0 0 chr18 46424990 46425041 -39563893 + AT_rich Low_complexity Low_complexity 1 51 0 953 213 6 0 chr18 46425074 46425248 -39563686 - MER58A DNA MER1_type -6 218 44 884 201 62 6 chr18 46425317 46425496 -39563438 + MER5A DNA MER1_type 1 189 0 683 142 110 65 chr18 46425683 46425794 -39563140 - MER105 DNA DNA -42 162 41 823 167 125 0 chr18 46425794 46425962 -39562972 + MER5A DNA MER1_type 1 189 0 683 142 110 65 chr18 46425962 46426005 -39562929 - MER105 DNA DNA -163 41 1 237 317 40 20 chr18 46426029 46426130 -39562804 - MIR SINE MIR -153 109 7 962 166 126 0 chr18 46427193 46427368 -39561566 - MER3 DNA MER1_type -12 197 1 261 57 0 0 chr18 46427400 46427435 -39561499 + (TC)n Simple_repeat Simple_repeat 2 36 0 233 252 218 34 chr18 46428128 46428334 -39560600 - L1MC4 LINE L1 -40 8002 7759 258 301 7 73 chr18 46429684 46429820 -39559114 + L3 LINE CR1 786 912 -665 667 261 122 37 chr18 46429902 46430197 -39558737 - MLT1J2 LTR MaLR -128 322 3 277 326 176 14 chr18 46430198 46430545 -39558389 + L3 LINE CR1 912 1314 -263 267 287 30 40 chr18 46430574 46430675 -39558259 + L2 LINE L2 3169 3268 -4 4477 193 44 50 chr18 46432020 46433227 -39555707 - L1MB7 LINE L1 0 6184 4992 2158 111 27 0 chr18 46433227 46433525 -39555409 - AluSg SINE Alu -4 306 1 4477 193 44 50 chr18 46433525 46433900 -39555034 - L1MB7 LINE L1 -1192 4992 4616 351 230 11 35 chr18 46434857 46434944 -39553990 - MIR SINE MIR -94 168 84 529 127 0 0 chr18 46436474 46436553 -39552381 + MADE1 DNA Mariner 1 79 -1 180 290 142 71 chr18 46436554 46436723 -39552211 - MIR3 SINE MIR -25 183 3 199 306 73 65 chr18 46436954 46437078 -39551856 - L2 LINE L2 -7 3265 3141 216 67 0 0 chr18 46437103 46437133 -39551801 + (CA)n Simple_repeat Simple_repeat 1 30 0 208 135 0 0 chr18 46437650 46437687 -39551247 + (T)n Simple_repeat Simple_repeat 1 37 0 1544 79 0 0 chr18 46437701 46437890 -39551044 - AluY SINE Alu -122 189 1 410 296 48 44 chr18 46438357 46438563 -39550371 - MLT1J LTR MaLR -3 508 302 238 256 8 19 chr18 46439858 46439992 -39548942 - MIR3 SINE MIR -7 201 23 184 261 43 0 chr18 46440909 46440955 -39547979 + MIR SINE MIR 68 115 -93 325 281 74 41 chr18 46440968 46441089 -39547845 - MIR SINE MIR -91 171 47 1987 145 0 0 chr18 46441117 46441406 -39547528 + AluSx SINE Alu 1 289 -23 209 108 0 27 chr18 46441606 46441643 -39547291 + (TTTC)n Simple_repeat Simple_repeat 1 36 0 284 336 34 60 chr18 46441889 46442038 -39546896 + MIR SINE MIR 38 182 -80 505 324 17 22 chr18 46443652 46443831 -39545103 + L3 LINE CR1 1383 1560 -17 435 325 8 16 chr18 46444230 46444356 -39544578 + L2 LINE L2 3143 3267 -5 197 257 70 99 chr18 46444436 46444521 -39544413 + L2 LINE L2 2999 3078 -235 2245 97 0 23 chr18 46444521 46444821 -39544113 - AluSc SINE Alu -16 293 1 197 257 70 99 chr18 46444821 46444906 -39544028 + L2 LINE L2 3078 3164 -149 278 244 12 0 chr18 46444910 46444992 -39543942 + (TA)n Simple_repeat Simple_repeat 1 83 0 335 173 67 0 chr18 46445092 46445167 -39543767 + L2 LINE L2 3160 3239 -74 711 245 80 88 chr18 46445170 46445533 -39543401 - MLT1A1 LTR MaLR 0 365 6 235 259 0 0 chr18 46445554 46445608 -39543326 + L2 LINE L2 3255 3308 -5 253 309 203 16 chr18 46446146 46446269 -39542665 + MIR3 SINE MIR 25 170 -38 264 256 26 77 chr18 46447415 46447532 -39541402 - MIR SINE MIR -100 162 52 310 324 81 0 chr18 46448281 46448392 -39540542 - MIR3 SINE MIR -2 206 87 218 324 39 20 chr18 46448545 46448647 -39540287 - MIR SINE MIR -65 143 40 21 0 0 0 chr18 46449704 46449725 -39539209 + AT_rich Low_complexity Low_complexity 1 21 0 252 0 0 0 chr18 46450198 46450226 -39538708 + (T)n Simple_repeat Simple_repeat 1 28 0 243 0 0 0 chr18 46451176 46451203 -39537731 + (T)n Simple_repeat Simple_repeat 1 27 0 265 271 29 0 chr18 46452014 46452084 -39536850 - MIR SINE MIR -62 146 75 795 224 6 6 chr18 46452234 46452399 -39536535 - FRAM SINE Alu -1 165 1 234 0 0 0 chr18 46452913 46452939 -39535995 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 189 0 0 0 chr18 46452939 46452960 -39535974 + (CAA)n Simple_repeat Simple_repeat 1 21 0 235 369 78 0 chr18 46453201 46453304 -39535630 + MIR SINE MIR 36 146 -62 41747 67 5 3 chr18 46454115 46460241 -39528693 - L1PA5 LINE L1 -13 6141 4 460 242 114 20 chr18 46460267 46460310 -39528624 - MIR SINE MIR -70 192 154 2318 119 0 0 chr18 46460310 46460620 -39528314 - AluSx SINE Alu -2 310 1 460 242 114 20 chr18 46460620 46460725 -39528209 - MIR SINE MIR -108 154 30 775 260 13 21 chr18 46460771 46461006 -39527928 - MIR SINE MIR -21 241 9 204 303 18 28 chr18 46461798 46461907 -39527027 + MER5A DNA MER1_type 54 161 -28 281 262 37 19 chr18 46463235 46463342 -39525592 - MIR SINE MIR -3 259 151 2855 3 0 10 chr18 46463342 46463649 -39525285 + AluYa5 SINE Alu 1 304 -7 276 284 239 0 chr18 46463870 46463979 -39524955 + MER5A DNA MER1_type 40 174 -15 390 108 0 0 chr18 46465124 46465189 -39523745 + (TG)n Simple_repeat Simple_repeat 1 65 0 2589 231 67 42 chr18 46465241 46466019 -39522915 - L1ME2 LINE L1 -2 6231 5435 3497 281 88 39 chr18 46466080 46467252 -39521682 - L1ME2 LINE L1 -3513 2702 1588 1908 116 10 27 chr18 46467252 46467546 -39521388 - AluSx SINE Alu -7 305 17 3497 281 88 39 chr18 46467546 46468969 -39519965 - L1ME2 LINE L1 -4627 1588 4 647 247 17 17 chr18 46469658 46469832 -39519102 - MER5B DNA MER1_type 0 178 5 2066 155 3 0 chr18 46469998 46470308 -39518626 - AluSx SINE Alu -1 311 1 507 276 22 17 chr18 46470588 46470769 -39518165 - MER5A DNA MER1_type -1 188 7 1208 59 0 29 chr18 46471171 46471341 -39517593 - L1PA5 LINE L1 -1 6153 5989 1124 62 27 0 chr18 46471341 46471506 -39517428 + L1P LINE L1 5179 5347 -799 343 326 101 7 chr18 46472859 46472997 -39515937 - L2 LINE L2 0 3272 3122 280 204 0 0 chr18 46473183 46473237 -39515697 - L2 LINE L2 -1 3312 3259 198 0 0 0 chr18 46473668 46473690 -39515244 + (T)n Simple_repeat Simple_repeat 1 22 0 2179 97 7 27 chr18 46473812 46474110 -39514824 - AluSp SINE Alu -21 292 1 379 0 39 0 chr18 46474797 46474848 -39514086 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 196 333 206 0 chr18 46475731 46475833 -39513101 + MIR SINE MIR 20 142 -66 180 77 0 0 chr18 46476142 46476168 -39512766 + (TC)n Simple_repeat Simple_repeat 1 26 0 216 0 0 0 chr18 46480687 46480711 -39508223 + (A)n Simple_repeat Simple_repeat 1 24 0 396 307 29 0 chr18 46481709 46481846 -39507088 + MIR3 SINE MIR 19 159 -49 310 256 35 0 chr18 46481915 46482001 -39506933 - MIR SINE MIR -88 174 86 205 197 105 26 chr18 46482070 46482146 -39506788 - MIR3 SINE MIR -124 84 3 194 307 219 7 chr18 46484352 46484489 -39504445 + MIR3 SINE MIR 37 202 -6 336 319 26 0 chr18 46484868 46484984 -39503950 - MIR3 SINE MIR -36 172 54 1735 148 60 0 chr18 46486269 46486553 -39502381 - AluSx SINE Alu -11 301 1 1447 166 73 40 chr18 46486699 46487000 -39501934 - AluJo SINE Alu -1 311 1 2010 140 0 35 chr18 46489964 46490278 -39498656 + AluJo SINE Alu 1 303 -9 319 312 64 56 chr18 46491813 46492047 -39496887 + MIR SINE MIR 21 256 -6 959 262 58 8 chr18 46492496 46492811 -39496123 - MLT1E2 LTR MaLR 0 626 261 210 244 73 67 chr18 46493336 46493500 -39495434 - L2 LINE L2 -61 3252 3088 288 295 55 38 chr18 46495315 46495498 -39493436 + MIR SINE MIR 77 262 0 2218 106 3 0 chr18 46495625 46495917 -39493017 - AluSq SINE Alu -20 293 1 14602 42 1 1 chr18 46495935 46498469 -39490465 - L1PA4 LINE L1 0 6155 3629 670 246 86 51 chr18 46498997 46499310 -39489624 - MER5C DNA MER1_type 0 324 1 217 339 62 16 chr18 46499310 46499550 -39489384 - L2 LINE L2 -609 2705 2455 301 282 107 15 chr18 46500905 46501036 -39487898 - MIR3 SINE MIR -50 158 16 387 0 0 0 chr18 46501140 46501183 -39487751 + (CA)n Simple_repeat Simple_repeat 2 44 0 754 279 46 12 chr18 46501695 46501935 -39486999 + MIR SINE MIR 5 252 -10 334 272 52 22 chr18 46501988 46502124 -39486810 + MIR SINE MIR 111 250 -12 465 292 22 12 chr18 46503947 46504115 -39484819 - MIR SINE MIR -38 170 4 231 313 70 16 chr18 46505041 46505169 -39483765 - L2 LINE L2 -8 3305 3171 280 196 20 0 chr18 46505487 46505538 -39483396 - L3 LINE CR1 -1 1576 1525 504 249 24 115 chr18 46505915 46506064 -39482870 + MIR3 SINE MIR 16 142 -66 801 199 111 23 chr18 46506064 46506235 -39482699 + MER5A DNA MER1_type 1 186 -3 504 249 24 115 chr18 46506235 46506294 -39482640 + MIR3 SINE MIR 142 205 -3 213 254 17 17 chr18 46507988 46508047 -39480887 - MIR SINE MIR -63 145 87 716 310 53 4 chr18 46508400 46508645 -39480289 - MIR SINE MIR 0 262 6 2096 107 31 0 chr18 46509013 46509304 -39479630 + AluSg SINE Alu 1 300 -10 2090 120 28 87 chr18 46509312 46509670 -39479264 - MER1B DNA MER1_type 0 337 1 244 283 19 57 chr18 46509731 46509837 -39479097 + MIR SINE MIR 160 261 -1 2136 93 0 0 chr18 46509950 46510218 -39478716 + AluSx SINE Alu 1 268 -44 5449 153 107 17 chr18 46511172 46511440 -39477494 - Tigger3b DNA MER2_type -1863 1165 922 197 33 33 0 chr18 46511440 46511470 -39477464 + (TGAG)n Simple_repeat Simple_repeat 1 31 0 5449 153 107 17 chr18 46511470 46511983 -39476951 - Tigger3b DNA MER2_type -2106 922 260 458 57 14 0 chr18 46511983 46512053 -39476881 + (TATAG)n Simple_repeat Simple_repeat 4 74 0 5449 153 107 17 chr18 46512053 46512339 -39476595 - Tigger3b DNA MER2_type -2768 260 1 613 210 136 6 chr18 46512534 46512710 -39476224 - MARNA DNA Mariner -136 450 252 1010 279 65 73 chr18 46513904 46514708 -39474226 + L1ME3A LINE L1 460 1256 -4863 2281 30 0 11 chr18 46514724 46514993 -39473941 + AluYa5 SINE Alu 46 311 0 22 35 0 0 chr18 46515012 46515041 -39473893 + AT_rich Low_complexity Low_complexity 1 29 0 2607 68 0 0 chr18 46515180 46515491 -39473443 - AluY SINE Alu 0 311 1 405 0 0 0 chr18 46515580 46515625 -39473309 + (TG)n Simple_repeat Simple_repeat 2 46 0 1080 232 86 45 chr18 46515679 46516015 -39472919 - MSTD LTR MaLR -46 350 1 200 219 24 0 chr18 46516173 46516214 -39472720 + CT-rich Low_complexity Low_complexity 1 42 0 229 215 48 46 chr18 46516706 46516788 -39472146 - MIR SINE MIR -29 179 96 302 0 26 0 chr18 46520838 46520876 -39468058 + (CA)n Simple_repeat Simple_repeat 1 39 0 338 61 20 0 chr18 46521078 46521127 -39467807 + (TTCA)n Simple_repeat Simple_repeat 2 51 0 697 288 48 13 chr18 46521207 46521436 -39467498 + MIR SINE MIR 23 259 -3 337 382 42 0 chr18 46521468 46521633 -39467301 + L3 LINE CR1 1330 1501 -76 186 292 174 28 chr18 46521688 46521832 -39467102 - MIR SINE MIR -32 230 66 320 272 40 24 chr18 46523109 46523234 -39465700 - MARNA DNA Mariner -117 469 343 231 235 59 0 chr18 46523386 46523437 -39465497 + MARNA DNA Mariner 435 488 -98 905 211 36 54 chr18 46523952 46524175 -39464759 + MER20 DNA MER1_type 1 219 0 180 0 0 0 chr18 46525693 46525713 -39463221 + (T)n Simple_repeat Simple_repeat 1 20 0 198 143 0 0 chr18 46525829 46525864 -39463070 + (A)n Simple_repeat Simple_repeat 1 35 0 1852 281 90 73 chr18 46525965 46526928 -39462006 + L1ME3A LINE L1 2204 3149 -2980 280 61 0 0 chr18 46526928 46526961 -39461973 + U2 snRNA snRNA 1 33 -155 1852 281 90 73 chr18 46526961 46528453 -39460481 + L1ME3A LINE L1 3149 4734 -1395 345 287 95 46 chr18 46528425 46528815 -39460119 + L1ME3A LINE L1 4943 5351 -778 * 790 317 68 31 chr18 46528900 46529358 -39459576 + L1ME3A LINE L1 5393 5867 -286 455 313 90 42 chr18 46529453 46529619 -39459315 + MER91A DNA MER1_type 1 174 -22 207 0 0 0 chr18 46529719 46529742 -39459192 + (T)n Simple_repeat Simple_repeat 1 23 0 516 134 134 31 chr18 46530740 46530837 -39458097 - AluJb SINE Alu -203 109 3 198 0 0 0 chr18 46531188 46531210 -39457724 + (T)n Simple_repeat Simple_repeat 1 22 0 23 0 0 0 chr18 46531364 46531387 -39457547 + GC_rich Low_complexity Low_complexity 1 23 0 2327 105 0 3 chr18 46531387 46531692 -39457242 - AluSc SINE Alu -5 304 1 2400 179 49 5 chr18 46531813 46532260 -39456674 - MLT1C LTR MaLR 0 467 1 303 341 14 14 chr18 46533977 46534115 -39454819 + MIR SINE MIR 20 157 -105 253 350 79 7 chr18 46535170 46535310 -39453624 - MIR3 SINE MIR -55 153 4 514 235 40 105 chr18 46536125 46536325 -39452609 - MIR SINE MIR 0 262 76 252 275 87 0 chr18 46537180 46537249 -39451685 + MIR SINE MIR 24 98 -164 2170 235 20 19 chr18 46537549 46538086 -39450848 - MER74A LTR ERVL -13 545 8 1455 186 40 4 chr18 46538092 46538422 -39450512 + L1PB4 LINE L1 5781 6147 -7 240 35 0 0 chr18 46538853 46538882 -39450052 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 2220 116 0 0 chr18 46538885 46539178 -39449756 - AluSg SINE Alu -17 293 1 665 241 59 37 chr18 46540084 46540271 -39448663 + MIR SINE MIR 1 191 -71 35 0 0 0 chr18 46540271 46540306 -39448628 + AT_rich Low_complexity Low_complexity 1 35 0 238 200 123 0 chr18 46541357 46541422 -39447512 - MIR SINE MIR -73 189 117 324 0 0 0 chr18 46542172 46542208 -39446726 + (CA)n Simple_repeat Simple_repeat 1 36 0 264 271 118 0 chr18 46543442 46543527 -39445407 + MIR3 SINE MIR 108 202 -6 320 281 33 25 chr18 46544033 46544154 -39444780 - MIR SINE MIR -24 238 117 828 123 43 0 chr18 46544768 46544906 -39444028 - L1MA8 LINE L1 -1 6290 6147 350 254 130 30 chr18 46545364 46545533 -39443401 + MIR SINE MIR 20 205 -57 899 94 0 0 chr18 46545612 46545729 -39443205 + AluSc SINE Alu 193 309 0 324 0 0 0 chr18 46545895 46545931 -39443003 + (A)n Simple_repeat Simple_repeat 1 36 0 191 241 204 28 chr18 46546257 46546365 -39442569 - MIR SINE MIR -130 132 6 237 364 18 0 chr18 46547923 46548033 -39440901 + L2 LINE L2 2872 2983 -289 2210 113 0 0 chr18 46548183 46548492 -39440442 + AluSx SINE Alu 1 309 -3 599 303 22 6 chr18 46548555 46548733 -39440201 - MIR SINE MIR -80 182 2 22 0 0 0 chr18 46548978 46549000 -39439934 + AT_rich Low_complexity Low_complexity 1 22 0 877 253 21 9 chr18 46549414 46549647 -39439287 - MIR SINE MIR -19 243 8 211 232 155 111 chr18 46551944 46552125 -39436809 + MIR3 SINE MIR 14 202 -6 241 286 0 0 chr18 46552431 46552480 -39436454 + (CGTG)n Simple_repeat Simple_repeat 1 49 0 242 311 101 17 chr18 46552966 46553085 -39435849 - MIR SINE MIR -127 135 7 1166 182 52 15 chr18 46553357 46553626 -39435308 - MLT1D LTR MaLR 0 505 227 221 56 0 28 chr18 46553634 46553670 -39435264 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 18789 29 2 0 chr18 46553670 46556773 -39432161 - L1PA3 LINE L1 -24 6131 3024 413 243 45 93 chr18 46556773 46557020 -39431914 - MLT1D LTR MaLR -270 235 1 400 211 329 7 chr18 46557020 46557172 -39431762 - MIR SINE MIR -59 203 3 198 286 103 71 chr18 46557299 46557425 -39431509 - L2 LINE L2 -16 3297 3168 586 299 42 6 chr18 46558213 46558380 -39430554 + MER91A DNA MER1_type 2 174 -22 328 327 89 20 chr18 46558380 46558481 -39430453 + MER91A DNA MER1_type 89 196 0 24 0 0 0 chr18 46558615 46558639 -39430295 + AT_rich Low_complexity Low_complexity 1 24 0 382 335 29 18 chr18 46558897 46559128 -39429806 + MIR SINE MIR 19 246 -16 207 260 14 41 chr18 46559302 46559375 -39429559 - L2 LINE L2 -9 3304 3234 356 324 87 21 chr18 46559421 46559587 -39429347 + MIR3 SINE MIR 6 178 -67 22 0 0 0 chr18 46560162 46560184 -39428750 + AT_rich Low_complexity Low_complexity 1 22 0 2278 101 0 7 chr18 46561685 46561983 -39426951 + AluSc SINE Alu 1 296 -13 290 266 70 114 chr18 46562519 46562677 -39426257 + MIR SINE MIR 32 182 -80 779 297 26 9 chr18 46563070 46563299 -39425635 - MIR SINE MIR -11 251 19 247 299 289 0 chr18 46564561 46564762 -39424172 - MIR SINE MIR -2 260 2 330 308 168 0 chr18 46566669 46566776 -39422158 - MIR SINE MIR -55 153 29 2201 108 16 13 chr18 46567313 46567618 -39421316 + AluSx SINE Alu 1 306 -6 285 276 0 0 chr18 46567631 46567689 -39421245 + L2 LINE L2 3210 3267 -5 2307 101 0 0 chr18 46567780 46568067 -39420867 - AluSx SINE Alu -9 303 17 285 89 0 0 chr18 46568999 46569044 -39419890 + (CA)n Simple_repeat Simple_repeat 1 45 0 304 260 109 31 chr18 46570389 46570581 -39418353 - LTR37B LTR ERV1 -65 403 197 968 81 16 0 chr18 46570635 46570758 -39418176 + AluSq/x SINE Alu 1 125 -187 1899 112 7 32 chr18 46570776 46571061 -39417873 + AluSg SINE Alu 1 278 -32 579 299 108 5 chr18 46571254 46571468 -39417466 + MIR SINE MIR 15 250 -12 248 291 80 105 chr18 46571503 46571854 -39417080 + L2 LINE L2 2915 3256 -16 283 174 31 61 chr18 46573404 46573502 -39415432 + (CAGAGA)n Simple_repeat Simple_repeat 2 96 0 215 210 107 26 chr18 46573630 46573706 -39415228 - MIR3 SINE MIR -25 183 94 202 277 19 106 chr18 46573838 46573964 -39414970 + MIR SINE MIR 89 210 -52 2454 47 23 0 chr18 46574324 46574625 -39414309 + AluYb8 SINE Alu 1 308 -10 4840 226 62 25 chr18 46574626 46576314 -39412620 + L1ME LINE L1 3697 5321 -845 2060 127 3 0 chr18 46576314 46576632 -39412302 + AluY SINE Alu 1 319 0 198 0 0 0 chr18 46576632 46576654 -39412280 + (CA)n Simple_repeat Simple_repeat 1 22 0 4840 226 62 25 chr18 46576654 46576934 -39412000 + L1ME LINE L1 5320 5738 -428 302 250 0 0 chr18 46576935 46577019 -39411915 + L1MA10 LINE L1 6241 6324 -10 426 287 128 11 chr18 46577265 46577453 -39411481 - L3 LINE CR1 -236 1341 1132 191 215 62 15 chr18 46578037 46578102 -39410832 - L2 LINE L2 -64 3249 3182 470 224 100 57 chr18 46578346 46578556 -39410378 + MIR SINE MIR 28 246 -16 255 276 64 70 chr18 46578726 46578882 -39410052 + MER5A DNA MER1_type 13 167 -22 441 288 106 12 chr18 46579524 46579684 -39409250 - MIR SINE MIR -15 247 73 485 329 62 17 chr18 46579843 46580083 -39408851 - MIR SINE MIR -9 253 3 204 245 20 0 chr18 46580249 46580298 -39408636 + L2 LINE L2 3215 3264 -8 23 0 0 0 chr18 46581484 46581507 -39407427 + AT_rich Low_complexity Low_complexity 1 23 0 927 312 17 14 chr18 46582371 46582724 -39406210 - L1MCb LINE L1 -5679 366 13 2978 230 72 16 chr18 46582761 46583795 -39405139 - L1M4 LINE L1 -1086 5060 3969 313 281 92 56 chr18 46584309 46584558 -39404376 + MLT1L LTR MaLR 342 599 -16 893 138 7 21 chr18 46585215 46585360 -39403574 + FLAM_C SINE Alu 1 143 0 1282 85 0 0 chr18 46585460 46585613 -39403321 - AluSx SINE Alu -143 169 17 285 89 0 0 chr18 46586546 46586591 -39402343 + (CA)n Simple_repeat Simple_repeat 1 45 0 304 260 109 31 chr18 46587936 46588128 -39400806 - LTR37B LTR ERV1 -65 403 197 968 81 16 0 chr18 46588182 46588305 -39400629 + AluSq/x SINE Alu 1 125 -187 1899 112 7 32 chr18 46588323 46588608 -39400326 + AluSg SINE Alu 1 278 -32 579 299 108 5 chr18 46588801 46589015 -39399919 + MIR SINE MIR 15 250 -12 248 291 80 105 chr18 46589050 46589401 -39399533 + L2 LINE L2 2915 3256 -16 283 174 31 61 chr18 46590951 46591049 -39397885 + (CAGAGA)n Simple_repeat Simple_repeat 2 96 0 215 210 107 26 chr18 46591177 46591253 -39397681 - MIR3 SINE MIR -25 183 94 202 277 19 106 chr18 46591385 46591511 -39397423 + MIR SINE MIR 89 210 -52 2927 6 0 0 chr18 46591871 46592187 -39396747 + AluYb8 SINE Alu 1 316 -2 305 294 118 11 chr18 46592568 46592803 -39396131 + Charlie8 DNA MER1_type 9 254 -2163 188 298 131 0 chr18 46593278 46593362 -39395572 + MIR SINE MIR 162 256 -6 603 117 58 58 chr18 46594654 46594774 -39394160 + L1MC1 LINE L1 6214 6333 0 213 292 42 0 chr18 46595253 46595325 -39393609 + L2 LINE L2 3198 3272 0 786 343 41 45 chr18 46596087 46596597 -39392337 + L3 LINE CR1 735 1242 -335 2318 99 0 0 chr18 46597371 46597665 -39391269 - AluSg SINE Alu -16 294 1 1959 211 148 43 chr18 46598539 46599459 -39389475 - Charlie7 DNA MER1_type -144 2468 1453 357 261 126 69 chr18 46599519 46599780 -39389154 - Charlie7 DNA MER1_type -2336 276 1 277 348 17 9 chr18 46601647 46601762 -39387172 - MIR3 SINE MIR -7 201 86 1534 199 125 41 chr18 46602266 46602803 -39386131 - L1MC5 LINE L1 -49 7912 7331 1072 152 71 15 chr18 46602804 46603001 -39385933 - MER3 DNA MER1_type 0 209 2 598 276 127 30 chr18 46603180 46603609 -39385325 - L1MB7 LINE L1 -303 5818 5465 225 325 61 35 chr18 46604459 46604573 -39384361 - L2 LINE L2 -6 3266 3150 233 213 0 0 chr18 46605177 46605224 -39383710 + (TG)n Simple_repeat Simple_repeat 1 47 0 322 311 142 26 chr18 46605904 46606094 -39382840 + MIR SINE MIR 51 262 0 315 154 0 0 chr18 46606645 46606710 -39382224 + C-rich Low_complexity Low_complexity 5 69 0 25 51 0 0 chr18 46611131 46611170 -39377764 + AT_rich Low_complexity Low_complexity 1 39 0 328 291 80 34 chr18 46613851 46614026 -39374908 + MIR3 SINE MIR 24 206 -2 279 157 0 0 chr18 46614156 46614207 -39374727 + CT-rich Low_complexity Low_complexity 1 51 0 197 349 15 0 chr18 46614319 46614385 -39374549 + L2 LINE L2 2981 3047 -225 569 287 76 6 chr18 46614480 46614637 -39374297 + MER91A DNA MER1_type 1 168 -28 1297 229 55 80 chr18 46615028 46615505 -39373429 - L1MD2 LINE L1 -1 6358 5894 * 2951 213 49 58 chr18 46615501 46616071 -39372863 - L1MC3 LINE L1 -1 7990 7416 1565 198 0 38 chr18 46616071 46616390 -39372544 - AluJo SINE Alu -5 307 1 2951 213 49 58 chr18 46616390 46616408 -39372526 - L1MC3 LINE L1 -575 7416 7399 282 274 0 0 chr18 46616408 46616481 -39372453 - MLT1F1 LTR MaLR -450 117 45 2951 213 49 58 chr18 46616481 46616765 -39372169 - L1MC3 LINE L1 -592 7399 7114 1888 88 35 21 chr18 46616765 46617050 -39371884 - L1MB2 LINE L1 -5 6166 5878 2951 213 49 58 chr18 46617050 46617737 -39371197 - L1MC3 LINE L1 -877 7114 6372 2560 228 14 43 chr18 46617741 46618177 -39370757 - L1MD2 LINE L1 -474 5885 5475 1888 197 39 14 chr18 46618177 46618533 -39370401 - MLT1A1 LTR MaLR 0 365 1 2560 228 14 43 chr18 46618533 46618810 -39370124 - L1MD2 LINE L1 -884 5475 5192 204 254 32 32 chr18 46618887 46618950 -39369984 - MIR SINE MIR -97 111 49 374 271 45 73 chr18 46619069 46619246 -39369688 - MIR3 SINE MIR -28 180 9 245 274 60 65 chr18 46619967 46620135 -39368799 - L1ME3A LINE L1 -39 6131 5965 2099 223 55 88 chr18 46620221 46621095 -39367839 - L1MC5 LINE L1 -431 7530 6686 543 37 37 0 chr18 46621096 46621178 -39367756 + (TAGA)n Simple_repeat Simple_repeat 4 88 0 835 293 98 10 chr18 46621574 46621970 -39366964 - HAL1b LINE L1 -613 735 305 3319 170 17 0 chr18 46622299 46622841 -39366093 + Tigger2 DNA MER2_type 1 551 -2167 1987 139 40 3 chr18 46622838 46623161 -39365773 + Tigger2 DNA MER2_type 2384 2718 0 * 202 234 0 0 chr18 46623320 46623367 -39365567 + T-rich Low_complexity Low_complexity 1 47 0 8216 4 0 0 chr18 46623369 46624269 -39364665 - L1HS LINE L1 -2 6153 5254 1548 264 44 5 chr18 46624826 46625235 -39363699 + MER70B LTR ERVL 6 430 -148 2017 120 13 23 chr18 46625350 46625651 -39363283 + AluSx SINE Alu 4 301 -11 1723 204 33 9 chr18 46626344 46626673 -39362261 + MER58B DNA MER1_type 1 337 -4 306 247 144 0 chr18 46628396 46628493 -39360441 + MIR SINE MIR 82 192 -70 384 298 57 44 chr18 46628653 46628811 -39360123 + L3 LINE CR1 1151 1310 -267 280 283 75 38 chr18 46629033 46629139 -39359795 - L2 LINE L2 0 3313 3204 180 0 0 0 chr18 46629289 46629309 -39359625 + (T)n Simple_repeat Simple_repeat 1 20 0 331 223 89 18 chr18 46629994 46630106 -39358828 + Charlie7 DNA MER1_type 33 152 -2460 342 281 65 72 chr18 46630206 46630635 -39358299 + Charlie7 DNA MER1_type 329 721 -1891 238 261 54 0 chr18 46630947 46631039 -39357895 + Charlie7 DNA MER1_type 765 861 -1751 280 261 0 45 chr18 46631053 46631164 -39357770 + Charlie7 DNA MER1_type 2507 2612 0 1423 176 39 52 chr18 46631278 46631334 -39357600 + MER89 LTR ERV1 3 58 -501 2187 121 0 9 chr18 46631334 46631649 -39357285 + AluSx SINE Alu 1 312 0 1423 176 39 52 chr18 46631649 46631922 -39357012 + MER89 LTR ERV1 58 328 -231 377 237 0 8 chr18 46631972 46632090 -39356844 + CT-rich Low_complexity Low_complexity 4 120 0 273 357 54 0 chr18 46633350 46633462 -39355472 + MIR SINE MIR 39 156 -52 230 241 0 0 chr18 46634635 46634693 -39354241 + (TAG)n Simple_repeat Simple_repeat 1 58 0 209 250 39 0 chr18 46634943 46634995 -39353939 + GA-rich Low_complexity Low_complexity 3 56 0 255 312 28 18 chr18 46635725 46635834 -39353100 - MIR SINE MIR -105 157 48 252 343 90 18 chr18 46636176 46636342 -39352592 + MIR SINE MIR 15 192 -70 3271 114 7 2 chr18 46636574 46637028 -39351906 + L1PA13 LINE L1 5697 6152 -11 2171 98 3 26 chr18 46637194 46637499 -39351435 + AluSq SINE Alu 1 298 -15 2251 233 84 34 chr18 46637577 46638173 -39350761 - MLT1E2 LTR MaLR 0 626 1 200 321 138 24 chr18 46638234 46638574 -39350360 + L2 LINE L2 1540 1918 -1396 1873 142 48 3 chr18 46638580 46638889 -39350045 + THE1C LTR MaLR 53 375 0 2104 117 3 13 chr18 46639030 46639329 -39349605 - AluSc SINE Alu -13 296 1 2323 97 0 7 chr18 46639338 46639637 -39349297 - AluSq SINE Alu -16 297 1 466 271 85 37 chr18 46639652 46639840 -39349094 - MIR SINE MIR -65 197 1 290 351 15 22 chr18 46639866 46640000 -39348934 + L2 LINE L2 2614 2746 -568 184 299 134 22 chr18 46640392 46640526 -39348408 + L2 LINE L2 3165 3313 0 692 266 49 5 chr18 46642020 46642204 -39346730 - MIR SINE MIR -4 258 67 38 0 0 0 chr18 46642675 46642713 -39346221 + AT_rich Low_complexity Low_complexity 1 38 0 2197 117 0 3 chr18 46642823 46643122 -39345812 + AluSg SINE Alu 1 298 -12 21 57 0 0 chr18 46643613 46643648 -39345286 + AT_rich Low_complexity Low_complexity 1 35 0 205 113 0 113 chr18 46645389 46645442 -39343492 + MER5C DNA MER1_type 78 124 -200 209 159 0 68 chr18 46645602 46645646 -39343288 + MER5C DNA MER1_type 283 323 -1 183 42 0 0 chr18 46645737 46645761 -39343173 + (CA)n Simple_repeat Simple_repeat 2 25 0 1819 184 101 53 chr18 46646352 46646819 -39342115 - LTR2B LTR ERV1 0 490 2 183 301 72 62 chr18 46646891 46647084 -39341850 + MIR SINE MIR 59 253 -9 211 294 167 0 chr18 46648306 46648408 -39340526 - L2 LINE L2 0 3272 3154 1029 150 50 50 chr18 46649632 46649832 -39339102 + MER3 DNA MER1_type 1 200 -9 232 254 64 92 chr18 46649679 46649852 -39339082 - MER3 DNA MER1_type -5 204 37 * 716 340 24 39 chr18 46649892 46650442 -39338492 + L2 LINE L2 2614 3149 -164 212 103 51 0 chr18 46650442 46650481 -39338453 + (CATAT)n Simple_repeat Simple_repeat 1 41 0 212 189 38 0 chr18 46650484 46650537 -39338397 + (TCCA)n Simple_repeat Simple_repeat 3 57 0 418 317 49 6 chr18 46650604 46650768 -39338166 + L2 LINE L2 3133 3303 -10 1622 261 98 20 chr18 46650876 46651436 -39337498 + L2 LINE L2 2339 2942 -372 614 250 42 62 chr18 46651460 46651700 -39337234 + L2 LINE L2 3079 3313 0 611 110 0 0 chr18 46652160 46652242 -39336692 + AluY SINE Alu 1 82 -228 410 240 173 13 chr18 46653364 46653514 -39335420 - MIR SINE MIR -26 236 63 285 259 194 7 chr18 46653526 46653665 -39335269 - LTR33 LTR ERVL -27 494 330 591 260 77 39 chr18 46653741 46653949 -39334985 - LTR33 LTR ERVL -305 216 1 221 208 0 0 chr18 46655400 46655448 -39333486 + L2 LINE L2 3263 3310 -3 537 292 92 31 chr18 46655938 46656643 -39332291 - L1ME LINE L1 -4816 1399 655 25 0 0 0 chr18 46656702 46656727 -39332207 + AT_rich Low_complexity Low_complexity 1 25 0 332 370 44 38 chr18 46656963 46657282 -39331652 - L1ME LINE L1 -6030 366 46 287 335 6 25 chr18 46657314 46657475 -39331459 + (CATATA)n Simple_repeat Simple_repeat 3 160 0 260 290 168 57 chr18 46658724 46659029 -39329905 + L2 LINE L2 2670 3033 -280 28 0 0 0 chr18 46660158 46660186 -39328748 + AT_rich Low_complexity Low_complexity 1 28 0 1375 167 19 12 chr18 46661415 46661672 -39327262 + L1MB4 LINE L1 5901 6159 -21 363 309 139 35 chr18 46662365 46662595 -39326339 + MIR SINE MIR 5 258 -4 1490 203 10 3 chr18 46663908 46664214 -39324720 - AluSq SINE Alu 0 313 6 2217 108 7 3 chr18 46664656 46664986 -39323948 - AluSx SINE Alu 0 336 6 198 191 0 0 chr18 46665501 46665543 -39323391 + GA-rich Low_complexity Low_complexity 1 42 0 529 304 7 0 chr18 46665595 46665730 -39323204 + MIR3 SINE MIR 44 179 -29 411 288 164 14 chr18 46666015 46666234 -39322700 - L2 LINE L2 -1 3312 3061 * 2291 279 43 37 chr18 46666232 46667063 -39321871 - L2 LINE L2 -394 2920 2085 390 57 0 0 chr18 46667300 46667353 -39321581 + (TG)n Simple_repeat Simple_repeat 1 53 0 285 258 0 0 chr18 46668346 46668408 -39320526 + MER94 DNA DNA 1 62 -72 927 147 112 18 chr18 46668408 46668578 -39320356 + AluJb SINE Alu 118 303 -9 302 263 103 53 chr18 46669535 46669778 -39319156 - L1ME4a LINE L1 -17 6104 5850 217 291 23 47 chr18 46669779 46669865 -39319069 - MIR3 SINE MIR -7 201 118 283 333 68 45 chr18 46670055 46670232 -39318702 - MIR SINE MIR -62 200 20 2050 142 50 6 chr18 46670314 46670673 -39318261 + THE1C LTR MaLR 1 375 0 288 269 54 87 chr18 46670715 46670864 -39318070 - MIR SINE MIR 0 262 119 386 331 8 8 chr18 46671646 46671770 -39317164 - MER5B DNA MER1_type 0 178 55 6203 63 13 4 chr18 46671770 46671792 -39317142 - L1PA7 LINE L1 0 6154 6134 321 68 0 0 chr18 46671792 46671836 -39317098 + (CA)n Simple_repeat Simple_repeat 2 45 0 6203 63 13 4 chr18 46671836 46672632 -39316302 - L1PA7 LINE L1 -20 6134 5328 2094 84 31 0 chr18 46672623 46672910 -39316024 + L1P LINE L1 4028 4323 -1823 * 25 31 0 0 chr18 46673110 46673142 -39315792 + AT_rich Low_complexity Low_complexity 1 32 0 437 277 180 5 chr18 46673879 46674085 -39314849 + MER112 DNA MER1_type 8 249 -11 354 45 0 0 chr18 46675269 46675313 -39313621 + (CA)n Simple_repeat Simple_repeat 2 45 0 252 276 0 0 chr18 46675520 46675578 -39313356 - L2 LINE L2 -1 3312 3255 424 306 63 39 chr18 46676367 46676622 -39312312 - L2 LINE L2 -208 3064 2804 4278 206 36 24 chr18 46676893 46677881 -39311053 + L1MD2 LINE L1 5305 6304 -55 196 362 57 38 chr18 46679485 46679590 -39309344 - L2 LINE L2 -20 3252 3146 1214 202 10 68 chr18 46679601 46679893 -39309041 + AluSx SINE Alu 1 275 -37 25 0 0 0 chr18 46680105 46680130 -39308804 + AT_rich Low_complexity Low_complexity 1 25 0 225 309 43 0 chr18 46680313 46680407 -39308527 - MARNA DNA Mariner -248 338 241 320 393 0 17 chr18 46680544 46680717 -39308217 - MIR3 SINE MIR -6 202 33 212 184 0 0 chr18 46681272 46681310 -39307624 + (TAA)n Simple_repeat Simple_repeat 2 39 0 216 0 0 0 chr18 46681412 46681436 -39307498 + (A)n Simple_repeat Simple_repeat 1 24 0 400 195 12 37 chr18 46682152 46682211 -39306723 - AluSc SINE Alu -122 187 129 2273 108 0 0 chr18 46682211 46682506 -39306428 - AluSx SINE Alu -17 295 1 400 195 12 37 chr18 46682506 46682528 -39306406 - AluSc SINE Alu -180 129 108 541 150 86 43 chr18 46682532 46682672 -39306262 + MSTB1 LTR MaLR 287 432 0 293 294 33 71 chr18 46682676 46682860 -39306074 - L1MCc LINE L1 -5370 1053 877 575 208 0 9 chr18 46682860 46682966 -39305968 - FLAM_C SINE Alu -38 105 1 5201 151 36 5 chr18 46682970 46684306 -39304628 - L1MA5A LINE L1 -149 6148 4777 1681 249 116 84 chr18 46684303 46685934 -39303000 - L1MCc LINE L1 -4140 2852 1110 * 1280 199 47 32 chr18 46685983 46686260 -39302674 + MSTB1 LTR MaLR 1 281 -151 508 205 0 0 chr18 46686262 46686345 -39302589 - AluS SINE Alu -230 83 1 524 167 87 29 chr18 46686377 46686515 -39302419 + MSTB1 LTR MaLR 287 432 0 546 335 11 31 chr18 46686519 46686779 -39302155 - L1MCc LINE L1 -5370 1053 799 962 300 62 40 chr18 46686867 46687444 -39301490 - L1MCc LINE L1 -5810 613 24 427 339 67 38 chr18 46687510 46687855 -39301079 - L1MEd LINE L1 -5238 881 527 226 232 36 0 chr18 46687914 46687970 -39300964 + CT-rich Low_complexity Low_complexity 4 61 0 342 0 0 0 chr18 46689046 46689084 -39299850 + (T)n Simple_repeat Simple_repeat 1 38 0 27 0 0 0 chr18 46689473 46689500 -39299434 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr18 46689506 46689527 -39299407 + AT_rich Low_complexity Low_complexity 1 21 0 324 0 0 0 chr18 46689534 46689570 -39299364 + (T)n Simple_repeat Simple_repeat 1 36 0 218 173 0 19 chr18 46689635 46689687 -39299247 + GA-rich Low_complexity Low_complexity 3 53 0 229 274 48 12 chr18 46690286 46690370 -39298564 + MIR SINE MIR 173 259 -3 5820 108 14 8 chr18 46690529 46692020 -39296914 - L1PA15 LINE L1 -5 6160 4661 22 0 0 0 chr18 46692026 46692048 -39296886 + AT_rich Low_complexity Low_complexity 1 22 0 1349 49 60 5 chr18 46692049 46692233 -39296701 - L1PB1 LINE L1 0 6151 5958 702 145 0 0 chr18 46692236 46692353 -39296581 - L1PA15 LINE L1 -1473 4673 4557 2273 101 0 3 chr18 46692936 46693232 -39295702 + AluSg SINE Alu 1 295 -15 1224 202 0 8 chr18 46693424 46693672 -39295262 - L1P LINE L1 -1092 5054 4809 223 274 92 79 chr18 46693818 46693982 -39294952 + MIR SINE MIR 86 251 -11 276 77 0 0 chr18 46694848 46694887 -39294047 + (TA)n Simple_repeat Simple_repeat 2 40 0 190 313 27 62 chr18 46695335 46695447 -39293487 - L2 LINE L2 -49 3223 3116 300 279 90 27 chr18 46695502 46695613 -39293321 + MIR SINE MIR 31 148 -60 361 283 164 46 chr18 46695672 46695824 -39293110 - MER91A DNA MER1_type -25 171 2 372 310 155 0 chr18 46695830 46696004 -39292930 + MIR SINE MIR 58 258 -4 42 20 0 0 chr18 46696509 46696558 -39292376 + AT_rich Low_complexity Low_complexity 1 49 0 2448 95 73 3 chr18 46696591 46696917 -39292017 - L1PB1 LINE L1 -17 6134 5778 371 71 0 18 chr18 46696917 46696973 -39291961 + (TA)n Simple_repeat Simple_repeat 2 56 0 2448 95 73 3 chr18 46696973 46697015 -39291919 - L1PB1 LINE L1 -373 5778 5740 304 225 108 31 chr18 46697021 46697150 -39291784 - HAL1 LINE L1 -1446 1061 923 2401 44 3 17 chr18 46697624 46697909 -39291025 + AluY SINE Alu 1 283 -28 297 0 0 0 chr18 46697909 46697942 -39290992 + (CA)n Simple_repeat Simple_repeat 2 34 0 963 198 42 0 chr18 46698101 46698293 -39290641 - MER3 DNA MER1_type -1 208 9 504 0 0 0 chr18 46698351 46698407 -39290527 + (TG)n Simple_repeat Simple_repeat 1 56 0 1339 189 3 75 chr18 46698622 46698940 -39289994 - MLT1B LTR MaLR -95 295 1 255 340 32 0 chr18 46699183 46699277 -39289657 + MIR SINE MIR 85 181 -81 224 318 136 0 chr18 46700659 46700747 -39288187 + MIR SINE MIR 34 133 -129 516 267 156 15 chr18 46700966 46701173 -39287761 + MIR SINE MIR 20 252 -10 294 287 21 49 chr18 46701921 46702064 -39286870 + MIR SINE MIR 49 187 -75 450 223 55 21 chr18 46702246 46702387 -39286547 - MIR3 SINE MIR -2 206 61 23 0 0 0 chr18 46702665 46702688 -39286246 + AT_rich Low_complexity Low_complexity 1 23 0 189 104 21 42 chr18 46703405 46703453 -39285481 + (TTCTCC)n Simple_repeat Simple_repeat 1 47 0 1348 223 38 64 chr18 46703840 46704342 -39284592 - LTR53 LTR ERVL -10 509 21 209 250 0 19 chr18 46704807 46704859 -39284075 + L2 LINE L2 491 541 -2773 408 345 161 18 chr18 46706866 46707089 -39281845 - MIR SINE MIR 0 262 8 440 313 0 0 chr18 46707094 46707206 -39281728 + MER81 DNA DNA 1 112 -2 1563 189 36 71 chr18 46707259 46707651 -39281283 - MLT1B LTR MaLR -7 383 6 358 324 9 18 chr18 46707783 46707894 -39281040 + MER5B DNA MER1_type 65 174 -4 242 320 70 58 chr18 46708533 46708689 -39280245 + MIR3 SINE MIR 13 170 -38 22 0 0 0 chr18 46709143 46709165 -39279769 + AT_rich Low_complexity Low_complexity 1 22 0 1764 75 8 4 chr18 46709327 46709566 -39279368 - L1PA7 LINE L1 -3 6151 5912 467 314 88 18 chr18 46712764 46712990 -39275944 + MIR SINE MIR 15 256 -6 264 333 24 0 chr18 46713379 46713463 -39275471 + L2 LINE L2 3200 3285 -28 739 179 92 0 chr18 46715519 46715692 -39273242 + MER53 DNA DNA 1 189 0 268 294 0 73 chr18 46717011 46717120 -39271814 - MIR3 SINE MIR -3 205 105 507 270 43 18 chr18 46717517 46717680 -39271254 + L3 LINE CR1 1405 1571 -6 423 296 44 13 chr18 46718231 46718390 -39270544 - MIR3 SINE MIR -4 204 41 2258 227 40 7 chr18 46719246 46719819 -39269115 + L1MC4a LINE L1 5332 5923 -1885 741 300 49 12 chr18 46720591 46720834 -39268100 - MIR SINE MIR -4 258 7 1514 321 140 24 chr18 46721054 46722276 -39266658 + L2 LINE L2 1967 3313 0 357 346 86 16 chr18 46723052 46723295 -39265639 - MIR SINE MIR 0 262 3 358 363 56 26 chr18 46723999 46724269 -39264665 + HAL1b LINE L1 399 676 -672 1705 199 0 10 chr18 46724295 46724607 -39264327 + AluJb SINE Alu 1 309 -3 812 203 68 19 chr18 46724609 46724816 -39264118 + MIR SINE MIR 20 236 -26 303 284 8 75 chr18 46724846 46724980 -39263954 + HAL1b LINE L1 663 787 -561 379 321 77 24 chr18 46726351 46726728 -39262206 + L1M4 LINE L1 2877 3273 -2873 23 33 0 0 chr18 46727090 46727120 -39261814 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr18 46727359 46727380 -39261554 + AT_rich Low_complexity Low_complexity 1 21 0 443 161 21 0 chr18 46728057 46728150 -39260784 + CT-rich Low_complexity Low_complexity 2 96 0 1531 156 15 81 chr18 46728152 46728485 -39260449 - AluJo SINE Alu -1 311 1 313 281 92 56 chr18 46729142 46729391 -39259543 - MLT1L LTR MaLR -16 599 342 2978 230 72 16 chr18 46729905 46730939 -39257995 + L1M4 LINE L1 3969 5060 -1086 927 312 17 14 chr18 46730976 46731329 -39257605 + L1MCb LINE L1 13 366 -5679 23 0 0 0 chr18 46732193 46732216 -39256718 + AT_rich Low_complexity Low_complexity 1 23 0 204 245 20 0 chr18 46733402 46733451 -39255483 - L2 LINE L2 -8 3264 3215 485 329 62 17 chr18 46733617 46733857 -39255077 + MIR SINE MIR 3 253 -9 421 275 113 19 chr18 46734016 46734176 -39254758 + MIR SINE MIR 73 247 -15 255 276 64 70 chr18 46734818 46734974 -39253960 - MER5A DNA MER1_type -22 167 13 470 224 100 57 chr18 46735144 46735354 -39253580 - MIR SINE MIR -16 246 28 191 215 62 15 chr18 46735598 46735663 -39253271 + L2 LINE L2 3182 3249 -64 426 287 128 11 chr18 46736247 46736435 -39252499 + L3 LINE CR1 1132 1341 -236 302 250 0 0 chr18 46736681 46736765 -39252169 - L1MA10 LINE L1 -10 6324 6241 4855 225 62 26 chr18 46736766 46737046 -39251888 - L1ME LINE L1 -428 5721 5453 198 0 0 0 chr18 46737046 46737068 -39251866 + (TG)n Simple_repeat Simple_repeat 1 22 0 2059 127 3 0 chr18 46737068 46737386 -39251548 - AluY SINE Alu 0 319 1 4855 225 62 26 chr18 46737386 46739075 -39249859 - L1ME LINE L1 -696 5453 3678 2199 80 4 0 chr18 46739075 46739349 -39249585 - AluY SINE Alu -10 301 27 2222 112 0 0 chr18 46739827 46740121 -39248813 - AluSg SINE Alu -16 294 1 324 161 0 0 chr18 46740221 46740283 -39248651 + (ATAGG)n Simple_repeat Simple_repeat 4 65 0 2315 162 13 0 chr18 46740300 46740696 -39248238 - MER57A LTR ERV1 -2 401 1 320 250 0 0 chr18 46740773 46740841 -39248093 - MER112 DNA MER1_type -184 76 9 328 295 168 17 chr18 46743373 46743546 -39245388 - HAL1 LINE L1 -744 1763 1565 303 294 73 30 chr18 46743674 46743977 -39244957 - L1ME LINE L1 -4878 1241 926 26 0 0 0 chr18 46744542 46744568 -39244366 + AT_rich Low_complexity Low_complexity 1 26 0 3179 168 177 18 chr18 46745184 46745968 -39242966 - L1MC3 LINE L1 0 7785 6839 278 49 0 24 chr18 46745968 46746009 -39242925 + (TG)n Simple_repeat Simple_repeat 1 40 0 3179 168 177 18 chr18 46746009 46746123 -39242811 - L1MC3 LINE L1 -946 6839 6744 206 297 40 27 chr18 46750751 46750825 -39238109 + MIR3 SINE MIR 107 181 -27 321 89 0 0 chr18 46750835 46750880 -39238054 + (CA)n Simple_repeat Simple_repeat 2 46 0 334 244 23 23 chr18 46751707 46751924 -39237010 + GA-rich Low_complexity Low_complexity 1 217 0 466 325 80 8 chr18 46752267 46752504 -39236430 - MIR SINE MIR 0 262 9 2042 79 21 45 chr18 46753484 46753774 -39235160 + AluY SINE Alu 1 283 -28 243 29 29 0 chr18 46753774 46753809 -39235125 + (CAA)n Simple_repeat Simple_repeat 2 180 0 1408 201 58 0 chr18 46754740 46755014 -39233920 + AluJo SINE Alu 1 290 -22 186 268 0 0 chr18 46755036 46755077 -39233857 - MIR SINE MIR -24 238 198 366 332 93 10 chr18 46755083 46755276 -39233658 + MIR SINE MIR 3 211 -51 349 264 18 27 chr18 46755962 46756072 -39232862 + CT-rich Low_complexity Low_complexity 2 110 0 248 250 12 25 chr18 46756097 46756177 -39232757 - MIR SINE MIR -11 251 173 550 239 96 30 chr18 46756754 46756955 -39231979 + MIR SINE MIR 28 240 -22 276 296 46 56 chr18 46759211 46759319 -39229615 - L2 LINE L2 -6 3266 3160 300 91 0 0 chr18 46759344 46759388 -39229546 + (A)n Simple_repeat Simple_repeat 1 44 0 374 125 51 45 chr18 46761624 46761800 -39227134 + (TA)n Simple_repeat Simple_repeat 2 178 0 2261 160 42 0 chr18 46762432 46762832 -39226102 - L1MB3 LINE L1 -1 6182 5766 22 35 0 0 chr18 46763745 46763774 -39225160 + AT_rich Low_complexity Low_complexity 1 29 0 186 283 0 0 chr18 46764474 46764520 -39224414 + L2 LINE L2 3268 3313 0 2243 174 5 63 chr18 46765160 46765574 -39223360 - MLT1B LTR MaLR 0 390 1 269 302 73 39 chr18 46765716 46765895 -39223039 - MLT1K LTR MaLR -239 349 165 223 294 109 25 chr18 46766544 46766663 -39222271 + MIR3 SINE MIR 56 184 -24 552 296 62 11 chr18 46767483 46767659 -39221275 - MIR SINE MIR -28 234 50 556 309 82 10 chr18 46769048 46769255 -39219679 - MIR SINE MIR -30 232 11 8539 43 4 0 chr18 46769324 46770366 -39218568 - L1PA5 LINE L1 -896 5250 4205 7672 46 9 0 chr18 46770366 46771250 -39217684 + L1PA5 LINE L1 5256 6151 -3 629 234 134 17 chr18 46771253 46771492 -39217442 - MLT1J LTR MaLR -15 496 230 1366 211 132 15 chr18 46771773 46772100 -39216834 - MLT1A1 LTR MaLR 0 365 1 279 0 0 0 chr18 46773831 46773862 -39215072 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 205 352 87 25 chr18 46773938 46774134 -39214800 + L2 LINE L2 2718 2925 -389 648 298 96 5 chr18 46774287 46774495 -39214439 + MIR SINE MIR 15 241 -21 1981 206 59 38 chr18 46774626 46775121 -39213813 - MLT1D LTR MaLR 0 505 1 393 200 0 0 chr18 46775502 46775572 -39213362 - MIR SINE MIR -109 153 84 1686 185 3 22 chr18 46775619 46775933 -39213001 - AluJo SINE Alu 0 312 5 2034 165 141 3 chr18 46776530 46776906 -39212028 - MSTA LTR MaLR 0 428 1 549 283 21 26 chr18 46777515 46777706 -39211228 + L3 LINE CR1 1357 1546 -31 188 231 0 0 chr18 46779308 46779347 -39209587 - MIR SINE MIR -67 195 157 3254 143 10 6 chr18 46779709 46780221 -39208713 - L1MA5 LINE L1 0 6300 5787 329 303 0 0 chr18 46780242 46780331 -39208603 + L1MC4 LINE L1 6615 6703 -1339 324 250 0 62 chr18 46780251 46780347 -39208587 - L1MC4 LINE L1 -1339 6703 6614 * 312 137 0 0 chr18 46780352 46780403 -39208531 + (TA)n Simple_repeat Simple_repeat 1 51 0 315 315 0 0 chr18 46780408 46780497 -39208437 + L1MC4 LINE L1 6615 6703 -1339 301 326 0 0 chr18 46780457 46780546 -39208388 - L1MC4 LINE L1 -1339 6703 6615 * 317 276 23 0 chr18 46780528 46780615 -39208319 + L1MC4 LINE L1 6615 6703 -1339 227 281 0 0 chr18 46780646 46780728 -39208206 + L1MC4 LINE L1 6615 6696 -1346 209 200 0 0 chr18 46780728 46780763 -39208171 + (TATG)n Simple_repeat Simple_repeat 4 38 0 307 322 0 0 chr18 46780763 46780853 -39208081 + L1MC4 LINE L1 6614 6703 -1339 316 283 0 22 chr18 46780883 46780975 -39207959 + L1MC4 LINE L1 6614 6703 -1339 248 250 50 0 chr18 46780990 46781070 -39207864 + L1MC4 LINE L1 6615 6698 -1344 * 1152 186 9 0 chr18 46781057 46781272 -39207662 - L1M2 LINE L1 -508 5792 5576 185 267 156 33 chr18 46781813 46781903 -39207031 - MIR3 SINE MIR -96 112 12 295 255 0 88 chr18 46782646 46782748 -39206186 - L2 LINE L2 0 3272 3180 238 217 117 0 chr18 46782885 46782945 -39205989 + L1ME LINE L1 5605 5671 -450 233 174 29 43 chr18 46783079 46783148 -39205786 + (TAGA)n Simple_repeat Simple_repeat 1 68 0 23 0 0 0 chr18 46783272 46783295 -39205639 + AT_rich Low_complexity Low_complexity 1 23 0 238 365 62 14 chr18 46784056 46784201 -39204733 - L2 LINE L2 -173 3099 2948 212 340 21 0 chr18 46784219 46784316 -39204618 - MIR SINE MIR 0 262 164 1799 128 22 50 chr18 46784316 46784520 -39204414 - L1MA5 LINE L1 -413 5887 5694 2225 92 10 7 chr18 46784520 46784823 -39204111 - AluSc SINE Alu -5 304 1 1799 128 22 50 chr18 46784823 46784939 -39203995 - L1MA5 LINE L1 -606 5694 5576 502 205 11 162 chr18 46784960 46785070 -39203864 - MIR SINE MIR -93 169 97 2165 98 0 22 chr18 46785070 46785386 -39203548 - AluSg SINE Alu -1 309 1 502 205 11 162 chr18 46785386 46785460 -39203474 - MIR SINE MIR -165 97 13 317 284 113 18 chr18 46785635 46785857 -39203077 - L2 LINE L2 -519 2795 2553 2347 113 3 0 chr18 46786061 46786370 -39202564 - AluSp SINE Alu -2 311 2 192 241 37 37 chr18 46787576 46787630 -39201304 + L2 LINE L2 3198 3251 -21 428 279 62 34 chr18 46787662 46787841 -39201093 - MIR SINE MIR 0 262 79 2246 107 3 0 chr18 46788774 46789064 -39199870 + AluSx SINE Alu 2 292 -20 234 191 0 0 chr18 46789287 46789334 -39199600 + (TCCA)n Simple_repeat Simple_repeat 4 50 0 1720 193 52 39 chr18 46790424 46790808 -39198126 + MLT1B LTR MaLR 2 390 0 21 71 0 0 chr18 46790843 46790885 -39198049 + AT_rich Low_complexity Low_complexity 1 42 0 813 138 51 22 chr18 46790993 46791158 -39197776 - AluYb8 SINE Alu 0 314 146 1103 54 0 8 chr18 46791159 46791289 -39197645 + AluSg SINE Alu 3 131 -179 223 258 57 50 chr18 46791306 46791417 -39197517 - MIR SINE MIR -47 161 45 192 274 121 16 chr18 46793822 46793946 -39194988 - MIR SINE MIR -32 230 94 1966 168 3 0 chr18 46794096 46794394 -39194540 + AluJo SINE Alu 1 299 -13 189 0 0 0 chr18 46795184 46795205 -39193729 + (T)n Simple_repeat Simple_repeat 1 21 0 2442 88 15 9 chr18 46795462 46795793 -39193141 - L1PB1 LINE L1 -1 6150 5818 2215 158 29 16 chr18 46795908 46796293 -39192641 - MLT1B LTR MaLR 0 390 1 732 222 19 19 chr18 46797516 46797678 -39191256 - MER5A DNA MER1_type -22 167 6 291 356 40 6 chr18 46798450 46798624 -39190310 - MIR3 SINE MIR -26 182 3 22 0 0 0 chr18 46800195 46800217 -39188717 + AT_rich Low_complexity Low_complexity 1 22 0 2118 107 3 24 chr18 46802000 46802298 -39186636 - AluSx SINE Alu -20 292 1 498 252 52 7 chr18 46802443 46802578 -39186356 - MER5B DNA MER1_type 0 178 38 242 308 0 16 chr18 46803347 46803435 -39185499 - MIR SINE MIR -107 101 15 180 403 74 16 chr18 46803916 46804174 -39184760 + L2 LINE L2 2841 3113 -159 424 308 14 14 chr18 46804466 46804609 -39184325 - MIR3 SINE MIR 0 208 66 186 43 0 0 chr18 46805145 46805168 -39183766 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 2922 106 21 5 chr18 46805170 46805593 -39183341 - MER57B LTR ERV1 -4 430 1 199 259 19 0 chr18 46806014 46806068 -39182866 + L2 LINE L2 3191 3245 -27 212 225 8 171 chr18 46808051 46808180 -39180754 + MIR SINE MIR 85 192 -70 1165 157 0 24 chr18 46810172 46810382 -39178552 - L1PA16 LINE L1 -13 6153 5949 233 224 0 112 chr18 46810502 46810609 -39178325 + MIR3 SINE MIR 2 96 -112 1545 160 65 0 chr18 46810610 46810903 -39178031 + MER33 DNA MER1_type 1 312 -12 229 236 18 0 chr18 46813091 46813146 -39175788 + MARNA DNA Mariner 292 347 -239 243 61 0 0 chr18 46813325 46813358 -39175576 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 295 376 57 47 chr18 46813358 46813637 -39175297 - L2 LINE L2 -15 3257 2976 235 244 118 25 chr18 46813704 46813823 -39175111 + MER103 DNA DNA 35 164 -2 294 331 8 8 chr18 46815577 46815704 -39173230 + MIR SINE MIR 119 245 -17 267 277 53 11 chr18 46815844 46815938 -39172996 - L2 LINE L2 -8 3305 3208 329 340 10 0 chr18 46817230 46817327 -39171607 + MIR SINE MIR 52 149 -113 2309 120 0 0 chr18 46819162 46819470 -39169464 - AluSx SINE Alu -3 309 2 484 268 33 27 chr18 46819908 46820091 -39168843 - MIR SINE MIR -16 246 63 637 245 64 25 chr18 46820373 46820577 -39168357 - MIR SINE MIR -30 232 21 184 171 0 0 chr18 46820887 46820922 -39168012 - MIR SINE MIR -65 143 109 1253 207 24 0 chr18 46822501 46822752 -39166182 - MER58B DNA MER1_type -15 326 70 316 285 89 8 chr18 46822789 46822912 -39166022 + MIR3 SINE MIR 14 146 -62 2453 88 0 16 chr18 46823261 46823578 -39165356 + AluSx SINE Alu 1 312 0 462 271 143 52 chr18 46823912 46823937 -39164997 - MIR SINE MIR -1 261 240 2351 171 39 2 chr18 46823937 46824346 -39164588 - MSTB LTR MaLR 0 426 3 462 271 143 52 chr18 46824346 46824530 -39164404 - MIR SINE MIR -22 240 33 189 241 114 25 chr18 46825255 46825334 -39163600 - L3 LINE CR1 -256 1321 1236 614 149 65 0 chr18 46825460 46825567 -39163367 - FRAM SINE Alu -14 162 49 182 339 0 0 chr18 46825610 46825675 -39163259 - MIR SINE MIR -112 150 86 789 251 105 22 chr18 46826113 46826483 -39162451 - L1ME2 LINE L1 -280 5884 5484 579 315 50 0 chr18 46827409 46827650 -39161284 - MIR SINE MIR -7 255 3 241 235 168 50 chr18 46827708 46827827 -39161107 - MER5B DNA MER1_type -45 133 1 532 295 98 0 chr18 46828190 46828383 -39160551 + MIR SINE MIR 51 262 0 349 234 242 0 chr18 46829681 46829809 -39159125 + MIR SINE MIR 22 180 -82 522 167 10 0 chr18 46829922 46830018 -39158916 + MIR SINE MIR 166 262 0 215 281 78 0 chr18 46830257 46830321 -39158613 + L2 LINE L2 3166 3234 -38 269 320 0 0 chr18 46830734 46830812 -39158122 - MIR SINE MIR -116 146 69 283 275 99 0 chr18 46833196 46833287 -39155647 - MIR SINE MIR -60 202 103 377 333 23 114 chr18 46833552 46833894 -39155040 - L2 LINE L2 -10 3262 2952 2365 89 3 0 chr18 46834765 46835057 -39153877 + AluSq SINE Alu 6 298 -15 304 328 127 0 chr18 46835737 46835871 -39153063 + L2 LINE L2 3121 3271 -1 345 364 5 11 chr18 46837349 46837536 -39151398 + MER5A DNA MER1_type 2 187 -2 205 301 97 11 chr18 46838994 46839087 -39149847 - MIR3 SINE MIR -107 101 1 186 274 16 32 chr18 46839099 46839161 -39149773 - L3 LINE CR1 -15 1562 1502 401 213 0 0 chr18 46839830 46839910 -39149024 - MER116 DNA Mariner 0 80 1 194 232 0 89 chr18 46842159 46842215 -39146719 + MER5B DNA MER1_type 102 152 -26 209 279 115 39 chr18 46842266 46842370 -39146564 - MIR3 SINE MIR -95 113 2 216 191 0 0 chr18 46843235 46843282 -39145652 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 195 146 0 0 chr18 46843284 46843325 -39145609 + (CAGC)n Simple_repeat Simple_repeat 4 44 0 1923 117 25 110 chr18 46843580 46844017 -39144917 - L1MB4 LINE L1 -7 6173 5774 230 0 33 0 chr18 46846997 46847027 -39141907 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 313 248 215 0 chr18 46847191 46847312 -39141622 + MIR SINE MIR 104 250 -12 2448 81 0 13 chr18 46847372 46847679 -39141255 + AluSg SINE Alu 1 303 -7 198 299 134 38 chr18 46848766 46848923 -39140011 + MER5B DNA MER1_type 1 172 -6 180 0 0 0 chr18 46849316 46849336 -39139598 + (T)n Simple_repeat Simple_repeat 1 20 0 1290 144 171 23 chr18 46849408 46849671 -39139263 + AluJo SINE Alu 1 302 0 1508 188 24 24 chr18 46850664 46850956 -39137978 - AluJo SINE Alu -20 292 1 223 299 204 30 chr18 46850994 46851161 -39137773 + MIR SINE MIR 2 197 -65 1924 143 55 22 chr18 46854033 46854396 -39134538 + THE1C LTR MaLR 1 375 0 344 267 50 42 chr18 46854529 46854649 -39134285 - MIR3 SINE MIR -17 191 71 285 288 0 0 chr18 46856579 46856652 -39132282 + (TA)n Simple_repeat Simple_repeat 1 73 0 190 143 0 0 chr18 46856794 46856822 -39132112 + MIR SINE MIR 211 238 -24 244 342 27 65 chr18 46857282 46857466 -39131468 + MIR SINE MIR 33 209 -53 365 194 146 10 chr18 46857482 46857585 -39131349 - L2 LINE L2 0 3313 3197 273 261 46 0 chr18 46857798 46857863 -39131071 + MIR SINE MIR 15 82 -180 293 291 91 9 chr18 46859234 46859344 -39129590 - MIR3 SINE MIR -17 191 73 700 229 62 0 chr18 46859675 46859819 -39129115 - MER63A DNA MER1_type 0 210 58 189 0 0 0 chr18 46859824 46859845 -39129089 + (TTG)n Simple_repeat Simple_repeat 1 21 0 209 302 66 57 chr18 46861001 46861107 -39127827 + L3 LINE CR1 1418 1524 -53 288 366 20 0 chr18 46861806 46861907 -39127027 - L2 LINE L2 -21 3251 3149 294 301 39 84 chr18 46863536 46863739 -39125195 - MIR SINE MIR -68 194 1 2055 130 3 0 chr18 46864108 46864419 -39124515 + AluSx SINE Alu 1 312 0 269 324 84 28 chr18 46864446 46864588 -39124346 - MIR3 SINE MIR -1 207 58 360 267 0 0 chr18 46864722 46864797 -39124137 - MER5A DNA MER1_type -102 87 13 1209 189 75 16 chr18 46864817 46865123 -39123811 - MER33 DNA MER1_type 0 324 1 242 315 27 0 chr18 46865398 46865471 -39123463 + L3 LINE CR1 1503 1577 0 336 238 119 44 chr18 46865788 46865988 -39122946 + MIR SINE MIR 3 262 0 375 258 31 74 chr18 46866578 46866741 -39122193 - MIR3 SINE MIR -22 186 31 5413 98 0 14 chr18 46867086 46867787 -39121147 + LTR8 LTR ERV1 1 691 0 266 262 16 0 chr18 46868365 46868426 -39120508 + L2 LINE L2 3205 3266 -6 200 274 78 49 chr18 46870203 46870305 -39118629 + L2 LINE L2 3162 3266 -47 297 75 0 0 chr18 46870321 46870361 -39118573 + (AATTG)n Simple_repeat Simple_repeat 2 41 0 246 264 161 0 chr18 46870744 46870831 -39118103 + L2 LINE L2 3201 3301 -12 218 32 32 0 chr18 46870839 46870870 -39118064 + (TTG)n Simple_repeat Simple_repeat 2 33 0 809 127 34 0 chr18 46870870 46870988 -39117946 - AluSq/x SINE Alu -188 124 3 1150 317 79 28 chr18 46871262 46871870 -39117064 - L3 LINE CR1 -89 1488 850 22 56 0 0 chr18 46872638 46872674 -39116260 + AT_rich Low_complexity Low_complexity 1 36 0 2503 50 3 3 chr18 46872677 46872975 -39115959 + AluY SINE Alu 1 298 -13 1973 154 62 3 chr18 46873466 46873791 -39115143 - MER2 DNA MER2_type 0 344 1 220 268 71 0 chr18 46875057 46875113 -39113821 - L2 LINE L2 0 3313 3254 232 303 77 45 chr18 46875915 46876070 -39112864 + MIR SINE MIR 103 262 0 347 229 237 0 chr18 46876281 46876332 -39112602 - L1MA10 LINE L1 -4 6330 6280 619 194 21 170 chr18 46876332 46876662 -39112272 - L1ME1 LINE L1 -75 6091 5811 218 306 0 14 chr18 46877769 46877841 -39111093 + L3 LINE CR1 1504 1574 -3 4649 153 24 82 chr18 46878840 46879554 -39109380 + MER4D LTR ERV1 1 646 -257 2309 96 0 10 chr18 46879554 46879868 -39109066 - AluY SINE Alu 0 311 1 4649 153 24 82 chr18 46879868 46880112 -39108822 + MER4D LTR ERV1 646 903 0 1925 127 0 83 chr18 46880307 46880631 -39108303 - AluSx SINE Alu -15 297 1 264 30 0 0 chr18 46880921 46880954 -39107980 + (CA)n Simple_repeat Simple_repeat 2 34 0 636 188 39 0 chr18 46881164 46881292 -39107642 + MER94 DNA DNA 1 133 -1 204 329 63 0 chr18 46882134 46882213 -39106721 + MIR SINE MIR 21 104 -104 227 237 72 86 chr18 46882521 46882660 -39106274 - L2 LINE L2 0 3313 3177 2533 228 67 36 chr18 46882661 46882962 -39105972 - MER82 DNA MER2_type -1 652 362 1822 145 59 0 chr18 46882962 46883251 -39105683 - AluSx SINE Alu -3 309 4 2533 228 67 36 chr18 46883251 46883581 -39105353 - MER82 DNA MER2_type -291 362 2 380 328 148 38 chr18 46883695 46884122 -39104812 - L2 LINE L2 -352 2962 2489 786 252 122 31 chr18 46885608 46885929 -39103005 - MER21B LTR ERV1 -111 752 403 257 297 50 10 chr18 46886653 46886754 -39102180 - L2 LINE L2 0 3313 3209 941 296 66 44 chr18 46887185 46887529 -39101405 - L1ME1 LINE L1 -513 5651 5316 2068 136 7 3 chr18 46887529 46887824 -39101110 - AluSx SINE Alu -16 296 1 941 296 66 44 chr18 46887824 46888013 -39100921 - L1ME1 LINE L1 -848 5316 5133 1685 114 0 124 chr18 46888013 46888328 -39100606 + AluSx SINE Alu 1 276 -36 342 107 0 0 chr18 46888336 46888392 -39100542 + (TAAA)n Simple_repeat Simple_repeat 2 57 0 941 296 66 44 chr18 46888392 46888441 -39100493 - L1ME1 LINE L1 -1037 5127 5081 1885 161 3 0 chr18 46888441 46888733 -39100201 + AluJb SINE Alu 1 293 -19 941 296 66 44 chr18 46888733 46889052 -39099882 - L1ME1 LINE L1 -1083 5081 4700 272 321 12 0 chr18 46889804 46889888 -39099046 + MIR3 SINE MIR 112 196 -12 189 264 132 33 chr18 46889948 46890039 -39098895 + MIR3 SINE MIR 104 203 -5 342 310 23 76 chr18 46890051 46890222 -39098712 - MIR SINE MIR -88 174 13 1805 164 3 13 chr18 46892719 46893023 -39095911 - AluJb SINE Alu -11 301 1 182 297 9 108 chr18 46893115 46893226 -39095708 - L2 LINE L2 -100 3172 3073 325 333 44 85 chr18 46893860 46894178 -39094756 - L2 LINE L2 0 3272 2968 2547 101 25 11 chr18 46894243 46894600 -39094334 - MER57B LTR ERV1 -72 362 1 510 307 108 14 chr18 46895293 46895505 -39093429 - MIR SINE MIR -10 252 21 186 308 0 0 chr18 46895830 46895882 -39093052 + L2 LINE L2 3179 3230 -83 272 367 83 0 chr18 46897455 46897575 -39091359 - L2 LINE L2 -4 3268 3139 3325 122 14 65 chr18 46897722 46898279 -39090655 + L1PA16 LINE L1 5621 6149 -17 3295 37 19 0 chr18 46898304 46898683 -39090251 - L1PA4 LINE L1 0 6155 5770 6524 33 1 4 chr18 46898689 46899448 -39089486 - L1PA3 LINE L1 0 6155 5399 27 0 0 0 chr18 46899453 46899480 -39089454 + AT_rich Low_complexity Low_complexity 1 27 0 258 280 86 0 chr18 46899487 46899580 -39089354 - MIR SINE MIR -49 213 113 4786 202 50 111 chr18 46900155 46901527 -39087407 - L1MC4a LINE L1 0 7808 6543 201 74 0 0 chr18 46901527 46901554 -39087380 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 4786 202 50 111 chr18 46901554 46901753 -39087181 - L1MC4a LINE L1 -1265 6543 6333 2189 144 25 35 chr18 46901756 46902124 -39086810 - THE1B LTR MaLR 0 364 1 428 349 40 0 chr18 46902183 46902309 -39086625 + L3 LINE CR1 1038 1168 -409 714 301 81 20 chr18 46902410 46902706 -39086228 + L3 LINE CR1 1157 1470 -107 641 293 31 60 chr18 46903116 46903434 -39085500 - L2 LINE L2 -10 3303 2995 189 222 156 0 chr18 46904839 46904884 -39084050 - L2 LINE L2 -14 3258 3207 197 264 56 80 chr18 46905384 46905509 -39083425 + L2 LINE L2 3182 3303 -10 237 33 0 0 chr18 46906242 46906272 -39082662 + (TG)n Simple_repeat Simple_repeat 2 31 0 610 346 51 7 chr18 46907347 46907639 -39081295 + LTR16C LTR ERVL 187 491 0 365 323 81 0 chr18 46907762 46907886 -39081048 - MIR3 SINE MIR -40 168 35 3561 139 24 3 chr18 46908799 46909395 -39079539 + L1MA1 LINE L1 4343 4950 -1196 5358 103 23 32 chr18 46909395 46910190 -39078744 + L1MA1 LINE L1 5493 6298 -4 1134 310 72 30 chr18 46910268 46910810 -39078124 - MLT1K LTR MaLR 0 588 24 247 317 40 0 chr18 46912824 46912925 -39076009 + MIR SINE MIR 121 225 -37 964 265 132 16 chr18 46913082 46913493 -39075441 - L2 LINE L2 -89 3224 2782 260 214 0 0 chr18 46914467 46914509 -39074425 + MIR SINE MIR 59 100 -162 376 228 58 35 chr18 46914511 46914682 -39074252 - MER104 DNA Tc2 0 180 6 1956 142 34 0 chr18 46914698 46914993 -39073941 - AluJo SINE Alu -7 305 1 221 253 126 0 chr18 46915014 46915101 -39073833 + MIR SINE MIR 154 251 -11 850 185 201 11 chr18 46915551 46915735 -39073199 - MER20 DNA MER1_type 0 219 1 1221 186 112 0 chr18 46915878 46916093 -39072841 + MER8 DNA MER2_type 1 239 0 335 227 163 21 chr18 46916230 46916371 -39072563 - MIR SINE MIR -81 181 21 898 166 5 57 chr18 46917145 46917338 -39071596 - MER20 DNA MER1_type -11 208 26 294 311 5 2 chr18 46917384 46917496 -39071438 - MIR SINE MIR -64 144 32 266 275 14 0 chr18 46918573 46918642 -39070292 + (CA)n Simple_repeat Simple_repeat 1 70 0 224 203 31 0 chr18 46920082 46920146 -39068788 + CT-rich Low_complexity Low_complexity 3 68 0 1118 165 84 55 chr18 46921133 46921442 -39067492 + MER33 DNA MER1_type 1 318 -6 959 236 149 73 chr18 46921505 46921987 -39066947 + LTR33A LTR ERVL 2 520 -3 483 196 0 112 chr18 46922263 46922406 -39066528 - L1MD3 LINE L1 0 7995 7869 249 286 0 105 chr18 46922494 46922599 -39066335 - MIR3 SINE MIR -17 191 98 235 330 94 0 chr18 46973100 46973206 -39015728 + L2 LINE L2 3157 3272 0 307 308 8 43 chr18 46974657 46974774 -39014160 - MER5B DNA MER1_type -62 116 4 223 354 40 4 chr18 46976009 46976122 -39012812 + MIR SINE MIR 18 140 -68 421 291 57 7 chr18 46976748 46976889 -39012045 + MER117 DNA MER1_type 6 153 -44 459 348 0 0 chr18 46976932 46977070 -39011864 - MIR3 SINE MIR -51 157 20 190 314 43 0 chr18 46977238 46977308 -39011626 - MIR3 SINE MIR -3 205 133 * 222 297 44 55 chr18 46977302 46977393 -39011541 - L3 LINE CR1 -8 1569 1480 284 290 199 15 chr18 46979412 46979543 -39009391 - MIR SINE MIR -30 232 78 211 320 48 10 chr18 46979754 46979857 -39009077 - L2 LINE L2 -15 3257 3151 813 277 23 27 chr18 46980520 46980776 -39008158 + MIR SINE MIR 8 262 0 268 204 0 0 chr18 46981068 46981117 -39007817 - MLT1I LTR MaLR 0 409 361 2335 55 48 0 chr18 46981907 46982197 -39006737 - AluY SINE Alu -7 304 1 344 65 0 156 chr18 46983762 46983839 -39005095 + L1MC1 LINE L1 6258 6322 -11 348 258 235 41 chr18 46984311 46984532 -39004402 - L2 LINE L2 0 3313 3050 8062 27 0 0 chr18 46984768 46985856 -39003078 - L1PA4 LINE L1 0 6155 5064 325 257 9 46 chr18 46985865 46985974 -39002960 - MIR SINE MIR -108 154 50 231 287 52 35 chr18 46986961 46987076 -39001858 - L2 LINE L2 -51 3262 3146 287 301 204 5 chr18 46987639 46987845 -39001089 - MIR SINE MIR -6 256 10 1323 110 26 44 chr18 46988375 46988682 -39000252 - L1M3 LINE L1 -694 5474 5171 * 3261 140 8 117 chr18 46988681 46989415 -38999519 + L1MB1 LINE L1 5515 6168 0 260 245 105 69 chr18 46989424 46989560 -38999374 - MIR3 SINE MIR -46 162 19 736 302 111 62 chr18 46989581 46990183 -38998751 - L3 LINE CR1 -332 1245 614 207 167 0 0 chr18 46990403 46990445 -38998489 + T-rich Low_complexity Low_complexity 1 42 0 6643 91 3 3 chr18 46990450 46991504 -38997430 - L1PA14 LINE L1 0 6161 5100 661 263 74 16 chr18 46991507 46991697 -38997237 + MIR SINE MIR 44 244 -18 180 0 0 0 chr18 46991722 46991742 -38997192 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 338 295 120 22 chr18 46991796 46991979 -38996955 - MIR SINE MIR -6 256 56 2613 170 20 58 chr18 46992238 46992790 -38996144 + L1MB3 LINE L1 5651 6181 -2 786 253 0 0 chr18 46992844 46993014 -38995920 - MIR SINE MIR -70 192 23 322 232 0 12 chr18 46993858 46993940 -38994994 - L1MC4 LINE L1 -7 8035 7955 * 3654 231 72 15 chr18 46993931 46994904 -38994030 - L1MC4 LINE L1 -306 7736 6709 506 220 75 75 chr18 46994906 46995133 -38993801 + L2 LINE L2 2995 3221 -92 464 352 135 27 chr18 46995212 46995695 -38993239 - L2 LINE L2 -353 2961 2427 277 196 22 0 chr18 46996525 46996571 -38992363 - MIR SINE MIR -121 87 41 2002 174 55 42 chr18 46996775 46997160 -38991774 - MLT1B LTR MaLR 0 390 1 417 39 0 0 chr18 46997545 46997596 -38991338 + (TGAA)n Simple_repeat Simple_repeat 4 54 0 257 367 161 32 chr18 46997604 46998067 -38990867 + L2 LINE L2 2707 3234 -38 184 268 171 85 chr18 46998326 46998490 -38990444 + MER5B DNA MER1_type 1 178 0 201 284 45 57 chr18 46998509 46998597 -38990337 + MIR SINE MIR 44 130 -78 15204 124 25 20 chr18 46999231 46999422 -38989512 - Tigger1 DNA MER2_type -30 2388 2200 2047 119 27 7 chr18 46999422 46999717 -38989217 + AluSx SINE Alu 1 301 -11 15204 124 25 20 chr18 46999717 47001900 -38987034 - Tigger1 DNA MER2_type -218 2200 1 535 278 38 0 chr18 47002594 47002727 -38986207 + MIR3 SINE MIR 11 148 -60 186 297 90 58 chr18 47002907 47003062 -38985872 + MIR SINE MIR 36 195 -67 3873 130 0 22 chr18 47003570 47004109 -38984825 - MER1A DNA MER1_type 0 527 1 908 229 66 0 chr18 47004429 47004612 -38984322 - MER82 DNA MER2_type 0 653 459 942 203 28 0 chr18 47004816 47004993 -38983941 - MER82 DNA MER2_type -470 183 2 229 230 111 87 chr18 47005844 47005970 -38982964 + L2 LINE L2 3180 3308 -5 534 266 173 0 chr18 47006590 47006763 -38982171 - MER102a DNA MER1_type -2 328 126 502 244 56 56 chr18 47007515 47007712 -38981222 + MIR SINE MIR 10 206 -56 444 100 15 0 chr18 47008341 47008413 -38980521 + L1PA7 LINE L1 6074 6170 -2 202 337 0 20 chr18 47008507 47008560 -38980374 - L2 LINE L2 -30 3242 3190 225 0 0 0 chr18 47008560 47008585 -38980349 + (TA)n Simple_repeat Simple_repeat 2 26 0 202 337 0 20 chr18 47008585 47008629 -38980305 - L2 LINE L2 -82 3190 3147 189 147 0 0 chr18 47010022 47010056 -38978878 + (T)n Simple_repeat Simple_repeat 1 34 0 2615 109 8 8 chr18 47011121 47011496 -38977438 - THE1C LTR MaLR 0 375 1 2261 111 0 0 chr18 47013280 47013577 -38975357 + AluSx SINE Alu 1 297 -15 2383 207 60 10 chr18 47013729 47014208 -38974726 - MLT1F LTR MaLR -7 535 33 2381 107 0 0 chr18 47014518 47014826 -38974108 - AluSc SINE Alu -1 308 1 22 0 0 0 chr18 47015152 47015174 -38973760 + AT_rich Low_complexity Low_complexity 1 22 0 224 392 0 0 chr18 47017290 47017387 -38971547 - MIR3 SINE MIR -13 195 99 28 48 0 0 chr18 47017446 47017488 -38971446 + AT_rich Low_complexity Low_complexity 1 42 0 286 273 227 23 chr18 47018021 47018153 -38970781 + MIR3 SINE MIR 46 204 -4 273 308 58 0 chr18 47018474 47018578 -38970356 - MIR SINE MIR -68 140 31 302 261 34 11 chr18 47020370 47020458 -38968476 - L1MC4 LINE L1 -1339 6703 6614 459 125 0 0 chr18 47020458 47020530 -38968404 + (CA)n Simple_repeat Simple_repeat 2 73 0 325 285 51 36 chr18 47021591 47021776 -38967158 + MIR SINE MIR 30 210 -47 24 0 0 0 chr18 47022962 47022986 -38965948 + AT_rich Low_complexity Low_complexity 1 24 0 322 323 32 16 chr18 47023966 47024090 -38964844 - MIR SINE MIR -64 144 19 1327 112 0 17 chr18 47024329 47024548 -38964386 - AluY SINE Alu 0 323 108 21 0 0 0 chr18 47025027 47025048 -38963886 + AT_rich Low_complexity Low_complexity 1 21 0 205 133 44 0 chr18 47025060 47025105 -38963829 + (TG)n Simple_repeat Simple_repeat 1 47 0 400 297 121 16 chr18 47025124 47025306 -38963628 + MIR SINE MIR 56 256 -6 357 314 36 0 chr18 47026912 47027049 -38961885 + MIR SINE MIR 49 190 -72 24 0 0 0 chr18 47027053 47027077 -38961857 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr18 47028246 47028266 -38960668 + (TTG)n Simple_repeat Simple_repeat 2 21 0 534 319 211 11 chr18 47029428 47030073 -38958861 + L3 LINE CR1 546 1319 -258 214 272 216 16 chr18 47031487 47031612 -38957322 - MIR SINE MIR -16 246 97 248 288 12 12 chr18 47031771 47031851 -38957083 - L2 LINE L2 -2 3311 3232 248 213 0 0 chr18 47032277 47032324 -38956610 + GA-rich Low_complexity Low_complexity 2 48 0 1424 185 38 28 chr18 47032779 47033066 -38955868 + AluJo SINE Alu 1 290 -22 399 357 0 0 chr18 47033252 47033378 -38955556 - L2 LINE L2 -6 3266 3141 302 262 58 19 chr18 47034418 47034521 -38954413 + MIR SINE MIR 56 162 -100 451 246 2 0 chr18 47035897 47036008 -38952926 + MIR SINE MIR 45 157 -51 2732 179 4 4 chr18 47036019 47036484 -38952450 - MLT1C LTR MaLR 0 467 3 3281 146 37 30 chr18 47036945 47037568 -38951366 - MER39B LTR ERV1 -26 620 1 262 262 12 0 chr18 47038069 47038153 -38950781 + MIR3 SINE MIR 124 208 0 229 288 0 15 chr18 47038712 47038778 -38950156 + L2 LINE L2 3208 3272 0 2311 116 0 0 chr18 47038884 47039187 -38949747 - AluSg SINE Alu -7 303 1 472 259 24 48 chr18 47039267 47039433 -38949501 + MIR SINE MIR 45 206 -56 1594 203 38 27 chr18 47039993 47040363 -38948571 + MLT1A2 LTR MaLR 1 374 0 204 271 0 0 chr18 47040682 47040730 -38948204 + C-rich Low_complexity Low_complexity 3 50 0 195 338 19 57 chr18 47042514 47042671 -38946263 + L2 LINE L2 3159 3309 -4 1280 276 40 42 chr18 47044525 47044949 -38943985 - LTR16C LTR ERVL 0 491 69 27 0 0 0 chr18 47045366 47045393 -38943541 + AT_rich Low_complexity Low_complexity 1 27 0 358 185 12 0 chr18 47045740 47045821 -38943113 + MER96B DNA MER1_type? 45 126 -291 235 203 102 0 chr18 47045959 47046018 -38942916 + MIR SINE MIR 15 79 -183 496 250 17 0 chr18 47046752 47046872 -38942062 + MER94 DNA DNA 2 123 -11 1678 214 37 16 chr18 47047088 47047467 -38941467 - MER96B DNA MER1_type? -1 416 30 2478 90 0 0 chr18 47047614 47047924 -38941010 - AluSg SINE Alu 0 310 1 186 223 96 121 chr18 47047941 47048098 -38940836 - MIR3 SINE MIR -6 202 50 5680 84 1 1 chr18 47048119 47048888 -38940046 - L1P LINE L1 -842 5304 4536 4181 62 11 0 chr18 47048888 47049441 -38939493 + L1PA7 LINE L1 5616 6154 0 499 300 61 52 chr18 47049441 47049751 -38939183 - L2 LINE L2 -20 3293 2981 1098 189 20 0 chr18 47049792 47049993 -38938941 - MER20 DNA MER1_type -12 207 3 551 245 13 13 chr18 47051481 47051632 -38937302 + MIR SINE MIR 15 165 -97 381 235 39 39 chr18 47052396 47052498 -38936436 - MIR3 SINE MIR -20 188 87 219 273 15 0 chr18 47053255 47053321 -38935613 + MIR SINE MIR 66 132 -76 331 272 176 0 chr18 47056556 47056681 -38932253 + MIR SINE MIR 104 250 -12 201 396 0 0 chr18 47057142 47057248 -38931686 + MIR SINE MIR 145 250 -12 506 351 21 5 chr18 47057932 47058120 -38930814 + MIR3 SINE MIR 15 205 -3 218 260 13 13 chr18 47058882 47058959 -38929975 + GA-rich Low_complexity Low_complexity 2 78 0 237 128 0 0 chr18 47059328 47059375 -38929559 + (TCCA)n Simple_repeat Simple_repeat 2 48 0 180 254 18 36 chr18 47059732 47059787 -38929147 - MIR SINE MIR 0 262 209 205 259 0 17 chr18 47060044 47060102 -38928832 + GA-rich Low_complexity Low_complexity 2 58 0 306 283 25 17 chr18 47060604 47060724 -38928210 - L2 LINE L2 0 3313 3193 552 287 98 69 chr18 47060932 47061381 -38927553 - MLT1K LTR MaLR 0 588 127 240 35 0 0 chr18 47064529 47064558 -38924376 + (ATG)n Simple_repeat Simple_repeat 2 30 0 641 304 104 66 chr18 47064646 47065374 -38923560 - HAL1b LINE L1 -504 844 89 32600 106 9 67 chr18 47065654 47072182 -38916752 - L1PA7 LINE L1 -3 6151 12 224 333 0 0 chr18 47072990 47073056 -38915878 + L2 LINE L2 3197 3262 -10 27 0 0 0 chr18 47074666 47074693 -38914241 + AT_rich Low_complexity Low_complexity 1 27 0 878 260 56 11 chr18 47075782 47076067 -38912867 + L1ME4a LINE L1 5528 5825 -296 1473 242 74 72 chr18 47076071 47076612 -38912322 - MLT1F1 LTR MaLR 0 567 1 351 280 73 44 chr18 47076615 47076890 -38912044 + L1ME4a LINE L1 5828 6110 -11 564 304 136 33 chr18 47077759 47078091 -38910843 - MLT1J2 LTR MaLR -21 429 64 267 287 26 78 chr18 47078803 47078918 -38910016 - MIR SINE MIR -51 211 103 398 276 35 0 chr18 47080587 47080703 -38908231 - MIR3 SINE MIR -6 202 83 2299 177 35 55 chr18 47080736 47081249 -38907685 - MLT1D LTR MaLR 0 505 3 647 247 85 74 chr18 47081315 47081598 -38907336 - LTR16A LTR ERVL 0 450 165 186 43 0 0 chr18 47082116 47082139 -38906795 + (CAGGG)n Simple_repeat Simple_repeat 2 24 0 1848 162 0 0 chr18 47082993 47083271 -38905663 + AluSx SINE Alu 22 299 -13 213 293 20 30 chr18 47083272 47083372 -38905562 - MIR SINE MIR -64 144 78 381 323 55 0 chr18 47083610 47083774 -38905160 - MIR SINE MIR -42 220 48 983 281 75 54 chr18 47083870 47084986 -38903948 + L1MC/D LINE L1 4644 5783 -743 618 268 84 94 chr18 47085668 47086017 -38902917 - MLT1J LTR MaLR -52 459 115 1652 177 86 17 chr18 47086017 47086368 -38902566 - THE1C LTR MaLR 0 375 1 618 268 84 94 chr18 47086368 47086480 -38902454 - MLT1J LTR MaLR -396 115 3 192 250 29 15 chr18 47088099 47088167 -38900767 + L2 LINE L2 2404 2472 -842 1908 126 0 18 chr18 47088168 47088446 -38900488 - AluSx SINE Alu -39 273 1 375 23 0 0 chr18 47088644 47088688 -38900246 + (CA)n Simple_repeat Simple_repeat 1 44 0 200 226 0 32 chr18 47089029 47089091 -38899843 + A-rich Low_complexity Low_complexity 1 60 0 2044 176 29 103 chr18 47090013 47090236 -38898698 + MLT2B3 LTR ERVL 1 239 -315 1966 112 16 56 chr18 47090236 47090540 -38898394 + AluSq SINE Alu 1 292 -21 2044 176 29 103 chr18 47090540 47090861 -38898073 + MLT2B3 LTR ERVL 239 505 -49 262 157 78 0 chr18 47090861 47090912 -38898022 + L1MC4 LINE L1 6658 6712 -1330 427 288 71 52 chr18 47091035 47091302 -38897632 - L2 LINE L2 -5 3308 3037 351 325 30 6 chr18 47092504 47092673 -38896261 + L2 LINE L2 1713 1885 -1429 370 298 38 19 chr18 47093182 47093340 -38895594 + MIR SINE MIR 32 192 -70 255 222 63 111 chr18 47093478 47093604 -38895330 + MIR SINE MIR 88 207 -55 2860 10 0 0 chr18 47094043 47094349 -38894585 + AluY SINE Alu 1 306 -5 369 285 53 20 chr18 47094785 47094936 -38893998 - MIR SINE MIR -42 220 65 205 303 10 30 chr18 47095860 47095959 -38892975 - MER5A DNA MER1_type -13 176 80 252 310 60 0 chr18 47096084 47096184 -38892750 + L2 LINE L2 3144 3249 -23 254 402 2 4 chr18 47096486 47096612 -38892322 - MIR SINE MIR -64 144 20 185 303 131 0 chr18 47097644 47097743 -38891191 - MIR SINE MIR -66 142 31 1059 221 136 45 chr18 47100164 47100590 -38888344 + MLT1C LTR MaLR 1 465 -2 271 336 9 0 chr18 47100732 47100845 -38888089 + MIR3 SINE MIR 71 184 -24 362 363 99 21 chr18 47101273 47101557 -38887377 - L2 LINE L2 -7 3265 2960 2200 130 72 17 chr18 47102029 47102374 -38886560 + THE1B LTR MaLR 1 364 0 229 318 0 24 chr18 47103065 47103191 -38885743 + CT-rich Low_complexity Low_complexity 2 124 0 224 314 68 0 chr18 47103664 47103782 -38885152 - MIR3 SINE MIR -18 190 65 274 324 49 0 chr18 47103822 47103924 -38885010 + MIR3 SINE MIR 48 154 -54 2262 133 88 18 chr18 47107876 47108276 -38880658 - MSTA LTR MaLR 0 428 1 181 211 0 19 chr18 47108900 47108952 -38879982 + L2 LINE L2 3261 3311 -2 298 282 21 67 chr18 47109086 47109224 -38879710 + MIR3 SINE MIR 15 145 -75 287 143 0 18 chr18 47109992 47110048 -38878886 + (TTCC)n Simple_repeat Simple_repeat 4 58 0 445 273 7 36 chr18 47110101 47110240 -38878694 + MIR3 SINE MIR 38 172 -36 253 263 63 21 chr18 47110779 47110874 -38878060 - L2 LINE L2 -28 3244 3146 216 0 0 0 chr18 47112165 47112189 -38876745 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 294 244 108 29 chr18 47114431 47114583 -38874351 + MIR SINE MIR 20 183 -68 226 273 167 23 chr18 47115452 47115584 -38873350 - MER5A DNA MER1_type 0 189 39 225 315 45 71 chr18 47115741 47115943 -38872991 + MIR3 SINE MIR 15 212 -50 1992 136 0 22 chr18 47117067 47117384 -38871550 - AluSg SINE Alu 0 310 1 253 340 38 0 chr18 47117808 47117914 -38871020 + MIR SINE MIR 153 262 0 207 0 0 0 chr18 47118880 47118903 -38870031 + (CA)n Simple_repeat Simple_repeat 2 24 0 519 229 29 7 chr18 47120725 47120865 -38868069 - MIR3 SINE MIR -6 202 60 228 305 134 30 chr18 47121359 47121523 -38867411 + MIR SINE MIR 32 212 -50 257 263 165 68 chr18 47121758 47121891 -38867043 - MER91A DNA MER1_type -1 195 50 270 0 0 0 chr18 47122324 47122354 -38866580 + (CA)n Simple_repeat Simple_repeat 2 31 0 599 243 183 25 chr18 47122499 47122934 -38866000 + MLT1H LTR MaLR 1 542 -13 325 265 82 10 chr18 47123876 47123974 -38864960 - L2 LINE L2 -1 3312 3208 20528 31 2 0 chr18 47124445 47127639 -38861295 - L1PA4 LINE L1 0 6155 2958 207 0 0 0 chr18 47127735 47127758 -38861176 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 244 143 161 0 chr18 47128331 47128387 -38860547 - MIR3 SINE MIR -13 195 131 194 240 140 40 chr18 47128489 47128589 -38860345 - MIR3 SINE MIR -32 176 67 522 289 45 0 chr18 47129201 47129357 -38859577 - MIR SINE MIR -70 192 30 249 196 0 0 chr18 47129480 47129526 -38859408 + MIR SINE MIR 100 145 -63 2209 165 50 37 chr18 47130008 47130469 -38858465 - MLT1C LTR MaLR 0 467 1 464 47 0 16 chr18 47130758 47130822 -38858112 + (TCCC)n Simple_repeat Simple_repeat 1 63 0 915 216 105 86 chr18 47130822 47131526 -38857408 - L2 LINE L2 -1 3312 2597 517 179 185 6 chr18 47131530 47131703 -38857231 - L2 LINE L2 -902 2412 2209 492 241 26 0 chr18 47131703 47131819 -38857115 - MLT1F LTR MaLR 0 567 449 1554 215 68 49 chr18 47132124 47132534 -38856400 - MLT1F LTR MaLR -118 424 7 266 222 0 12 chr18 47132591 47132672 -38856262 + CT-rich Low_complexity Low_complexity 2 81 0 198 290 75 21 chr18 47132711 47132804 -38856130 - L2 LINE L2 -20 3252 3155 236 204 0 0 chr18 47133617 47133666 -38855268 + A-rich Low_complexity Low_complexity 1 49 0 207 100 0 0 chr18 47133807 47133837 -38855097 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 2093 129 0 7 chr18 47134207 47134494 -38854440 + AluSx SINE Alu 1 285 -27 238 293 71 50 chr18 47135560 47135659 -38853275 + L2 LINE L2 3186 3286 -27 324 0 0 0 chr18 47135783 47135819 -38853115 + (T)n Simple_repeat Simple_repeat 1 36 0 250 301 41 0 chr18 47136407 47136480 -38852454 - MIR3 SINE MIR -23 185 110 54 56 0 0 chr18 47136609 47136698 -38852236 + AT_rich Low_complexity Low_complexity 1 89 0 2277 104 3 0 chr18 47136705 47136994 -38851940 - AluSx SINE Alu -22 290 1 30 27 0 0 chr18 47137088 47137125 -38851809 + AT_rich Low_complexity Low_complexity 1 37 0 301 83 0 0 chr18 47137141 47137177 -38851757 + tRNA-Lys-AAG tRNA tRNA 3 38 -38 230 294 29 0 chr18 47137221 47137289 -38851645 + MER113 DNA MER1_type? 452 521 0 2842 186 47 2 chr18 47137450 47137987 -38850947 + MER68 LTR ERV1 2 562 0 316 244 120 50 chr18 47138283 47138533 -38850401 - HAL1b LINE L1 -12 1336 1236 2342 98 3 7 chr18 47138533 47138840 -38850094 - AluSp SINE Alu -7 306 1 316 244 120 50 chr18 47138840 47138888 -38850046 - HAL1b LINE L1 -112 1236 1193 1948 261 50 4 chr18 47139242 47139760 -38849174 + MER119 DNA MER1_type 1 542 -41 267 252 95 41 chr18 47139935 47140082 -38848852 - L1ME LINE L1 -394 5727 5573 744 218 107 5 chr18 47140363 47140579 -38848355 + MIR SINE MIR 8 245 -17 262 254 45 0 chr18 47141371 47141438 -38847496 + MIR SINE MIR 84 153 -109 1783 180 14 0 chr18 47142168 47142463 -38846471 + AluJo SINE Alu 1 299 -13 266 319 0 51 chr18 47143533 47143671 -38845263 - MIR SINE MIR -57 205 75 21 0 0 0 chr18 47143718 47143739 -38845195 + AT_rich Low_complexity Low_complexity 1 21 0 365 238 50 0 chr18 47144206 47144307 -38844627 + L2 LINE L2 3136 3241 -31 209 161 54 18 chr18 47144706 47144762 -38844172 - L2 LINE L2 -208 3064 3007 207 315 27 0 chr18 47145746 47145819 -38843115 - MIR3 SINE MIR -35 173 99 591 284 191 5 chr18 47146250 47146800 -38842134 - L2 LINE L2 -67 3246 2581 201 179 0 0 chr18 47148777 47148816 -38840118 + L2 LINE L2 3265 3303 -10 458 200 0 12 chr18 47149049 47149129 -38839805 + Tigger5 DNA MER2_type 1 79 -2244 342 197 28 0 chr18 47149131 47149202 -38839732 - Tigger5 DNA MER2_type -6 2317 2245 1508 222 60 14 chr18 47149686 47150033 -38838901 - MLT1A1 LTR MaLR 0 365 3 232 288 110 8 chr18 47150109 47150227 -38838707 - L3 LINE CR1 -6 1571 1442 556 284 19 0 chr18 47150253 47150408 -38838526 + MIR SINE MIR 46 203 -59 202 220 51 0 chr18 47151144 47151203 -38837731 - L3 LINE CR1 -576 1001 940 198 324 15 0 chr18 47151922 47151990 -38836944 + L2 LINE L2 2967 3035 -237 2260 92 3 3 chr18 47152542 47152834 -38836100 - AluSc SINE Alu -17 292 1 198 370 52 22 chr18 47152838 47152973 -38835961 - L2 LINE L2 -25 3247 3109 295 289 4 21 chr18 47153966 47154073 -38834861 - MIR SINE MIR -36 172 69 228 237 17 0 chr18 47155201 47155260 -38833674 - MLT1J1 LTR MaLR -343 103 44 21 36 0 0 chr18 47155362 47155390 -38833544 + AT_rich Low_complexity Low_complexity 1 28 0 266 243 98 51 chr18 47155578 47155792 -38833142 - L1MC4a LINE L1 -1907 5901 5678 202 245 20 0 chr18 47155927 47155976 -38832958 - L2 LINE L2 -85 3228 3179 211 275 50 0 chr18 47156202 47156282 -38832652 - L2 LINE L2 -328 2985 2902 1468 152 98 27 chr18 47157090 47157426 -38831508 - MER69 DNA AcHobo -1 2525 2166 2386 162 19 0 chr18 47157428 47157841 -38831093 - MER69 DNA AcHobo -265 2261 1841 2292 275 96 17 chr18 47157838 47158537 -38830397 - MER69 DNA AcHobo -1772 754 1 * 233 361 19 13 chr18 47158785 47158871 -38830063 + (TG)n Simple_repeat Simple_repeat 2 91 -69 2129 103 0 7 chr18 47158871 47159171 -38829763 - AluY SINE Alu -13 298 1 233 361 19 13 chr18 47159171 47159242 -38829692 + (TG)n Simple_repeat Simple_repeat 91 160 0 325 326 10 0 chr18 47159311 47159409 -38829525 - MIR SINE MIR -71 137 39 743 269 36 0 chr18 47159934 47160101 -38828833 - MIR SINE MIR -88 174 2 288 0 0 0 chr18 47160261 47160293 -38828641 + (CA)n Simple_repeat Simple_repeat 1 32 0 396 0 0 0 chr18 47160801 47160845 -38828089 + (TG)n Simple_repeat Simple_repeat 2 45 0 878 246 45 98 chr18 47162165 47162583 -38826351 + MLT1I LTR MaLR 14 409 0 392 303 11 76 chr18 47163538 47163723 -38825211 + MIR3 SINE MIR 35 207 -1 443 243 21 36 chr18 47164582 47164722 -38824212 + L2 LINE L2 3175 3312 -1 832 212 47 0 chr18 47165670 47165840 -38823094 + MER5B DNA MER1_type 1 178 0 209 317 24 12 chr18 47166649 47166731 -38822203 - MIR SINE MIR -61 201 119 214 273 212 20 chr18 47166786 47166885 -38822049 - MIR SINE MIR -75 133 16 583 203 222 7 chr18 47166892 47167045 -38821889 - MER5A DNA MER1_type -3 186 1 246 286 0 0 chr18 47167925 47167981 -38820953 + (TG)n Simple_repeat Simple_repeat 2 57 0 1736 316 65 13 chr18 47168322 47168923 -38820011 - MER115 DNA AcHobo 0 693 62 204 250 0 0 chr18 47169523 47169571 -38819363 + T-rich Low_complexity Low_complexity 1 48 0 262 235 59 0 chr18 47169843 47169911 -38819023 - MLT1F1 LTR MaLR 0 595 524 537 81 14 0 chr18 47170146 47170220 -38818714 - AluY SINE Alu -234 84 10 808 243 87 92 chr18 47170220 47170362 -38818572 - MLT1F1 LTR MaLR -196 394 253 2416 179 84 21 chr18 47170362 47170887 -38818047 - MER74A LTR ERVL 0 558 1 808 243 87 92 chr18 47170887 47171137 -38817797 - MLT1F1 LTR MaLR -337 253 3 1991 221 74 23 chr18 47172433 47172945 -38815989 - MLT1H LTR MaLR 0 549 12 332 376 108 26 chr18 47173288 47173703 -38815231 - L2 LINE L2 0 3272 2824 206 340 36 54 chr18 47173946 47174225 -38814709 - L2 LINE L2 -1067 2247 1974 702 287 21 5 chr18 47174243 47174431 -38814503 - MIR SINE MIR -24 238 48 450 289 101 0 chr18 47175188 47175337 -38813597 + MIR SINE MIR 20 183 -79 876 154 0 7 chr18 47175569 47175705 -38813229 - MSTD LTR MaLR 0 396 262 358 210 37 0 chr18 47176243 47176324 -38812610 - MIR3 SINE MIR -49 159 76 331 301 74 104 chr18 47176902 47177228 -38811706 + L2 LINE L2 2957 3272 0 746 213 153 11 chr18 47177367 47177550 -38811384 + MER63A DNA MER1_type 2 210 0 689 186 274 4 chr18 47177551 47177788 -38811146 - MER33 DNA MER1_type -23 301 1 371 291 94 8 chr18 47178563 47178690 -38810244 + MIR3 SINE MIR 27 164 -44 794 220 211 20 chr18 47178695 47179122 -38809812 + L2 LINE L2 2709 3313 0 235 250 164 52 chr18 47179641 47179757 -38809177 - L2 LINE L2 -58 3255 3127 289 89 22 0 chr18 47179757 47179802 -38809132 + MADE1 DNA Mariner 1 46 -34 972 283 179 3 chr18 47179806 47180270 -38808664 - L2 LINE L2 -197 3116 2579 1819 128 45 10 chr18 47180623 47180913 -38808021 - AluSx SINE Alu -1 311 12 542 250 9 0 chr18 47181297 47181413 -38807521 - MIR3 SINE MIR -24 184 67 643 323 124 7 chr18 47181737 47182019 -38806915 + L3 LINE CR1 1262 1576 -1 277 246 159 58 chr18 47183740 47183878 -38805056 - MIR3 SINE MIR -37 171 20 753 236 52 72 chr18 47184423 47184673 -38804261 - MIR SINE MIR 0 262 18 296 246 180 96 chr18 47184877 47184980 -38803954 - MER5A DNA MER1_type 0 189 65 2253 92 0 7 chr18 47184980 47185285 -38803649 - AluSg1 SINE Alu -6 303 1 296 246 180 96 chr18 47185285 47185348 -38803586 - MER5A DNA MER1_type -124 65 9 268 267 69 50 chr18 47185851 47185952 -38802982 + MIR3 SINE MIR 101 203 -5 2364 38 3 3 chr18 47186685 47186978 -38801956 + AluY SINE Alu 1 293 -18 2381 70 0 0 chr18 47187136 47187438 -38801496 - AluY SINE Alu -9 302 1 266 246 31 15 chr18 47187654 47187719 -38801215 + MIR3 SINE MIR 97 162 -46 476 291 35 28 chr18 47191559 47191700 -38797234 - MIR3 SINE MIR -49 159 18 803 136 0 0 chr18 47191857 47191975 -38796959 + FRAM SINE Alu 1 117 -59 1667 166 3 10 chr18 47192537 47192838 -38796096 - AluJo SINE Alu -13 299 1 200 35 35 0 chr18 47193138 47193167 -38795767 + (CCA)n Simple_repeat Simple_repeat 1 30 0 2291 84 3 0 chr18 47194123 47194420 -38794514 + AluSp SINE Alu 1 298 -15 36 23 0 0 chr18 47196227 47196270 -38792664 + AT_rich Low_complexity Low_complexity 1 43 0 218 299 82 21 chr18 47196555 47196652 -38792282 - MIR SINE MIR -49 213 111 835 216 12 23 chr18 47196652 47196823 -38792111 - MER96 DNA MER1_type? -6 169 1 201 272 155 29 chr18 47196824 47196927 -38792007 - MIR3 SINE MIR -92 116 1 186 333 0 0 chr18 47197204 47197264 -38791670 - MIR SINE MIR -62 146 87 1380 149 35 35 chr18 47197392 47197561 -38791373 - AluJb SINE Alu -14 298 127 225 0 0 0 chr18 47197561 47197586 -38791348 + (TA)n Simple_repeat Simple_repeat 2 26 0 1380 149 35 35 chr18 47197586 47197677 -38791257 - AluJb SINE Alu -184 128 38 401 309 48 24 chr18 47198340 47198386 -38790548 - MIR SINE MIR -5 257 214 1096 212 0 22 chr18 47198386 47198608 -38790326 + MER20 DNA MER1_type 3 219 0 401 309 48 24 chr18 47198608 47198729 -38790205 - MIR SINE MIR -48 214 86 180 393 49 0 chr18 47198797 47198919 -38790015 - MIR SINE MIR -122 140 13 628 256 190 19 chr18 47199307 47199518 -38789416 + MIR SINE MIR 15 261 -1 1735 166 0 14 chr18 47199678 47199993 -38788941 - AluJo SINE Alu 0 311 1 397 284 135 7 chr18 47200088 47200236 -38788698 + MIR SINE MIR 96 262 0 312 323 71 0 chr18 47201821 47201920 -38787014 + L2 LINE L2 3203 3308 -5 197 219 302 21 chr18 47202572 47202668 -38786266 - MIR SINE MIR -85 177 55 297 0 0 0 chr18 47202919 47202952 -38785982 + (T)n Simple_repeat Simple_repeat 1 33 0 2770 6 0 3 chr18 47203403 47203715 -38785219 - AluYa5 SINE Alu 0 311 1 2428 58 0 0 chr18 47205164 47205459 -38783475 + AluY SINE Alu 1 295 -16 325 308 75 13 chr18 47205559 47205718 -38783216 + MIR3 SINE MIR 33 201 -7 704 182 38 50 chr18 47207269 47207428 -38781506 - MER63A DNA MER1_type 0 210 54 205 179 0 0 chr18 47207456 47207495 -38781439 + (CAAA)n Simple_repeat Simple_repeat 4 42 0 2175 96 7 0 chr18 47207542 47207843 -38781091 + AluSp SINE Alu 1 303 -10 838 245 16 11 chr18 47208500 47208684 -38780250 - MER5A DNA MER1_type -2 187 3 667 224 14 20 chr18 47208758 47208905 -38780029 - MER5A DNA MER1_type -21 168 23 451 260 185 14 chr18 47208923 47209069 -38779865 + MER5B DNA MER1_type 5 175 -3 251 287 30 0 chr18 47210082 47210183 -38778751 + MER5B DNA MER1_type 48 151 -27 442 263 10 0 chr18 47210843 47210942 -38777992 + MER45A DNA AcHobo 79 178 0 183 184 145 92 chr18 47211660 47211736 -38777198 - MER5A DNA MER1_type -50 139 60 791 179 60 4 chr18 47212595 47212767 -38776167 - L1M4 LINE L1 -1098 5048 4872 288 0 0 0 chr18 47213019 47213051 -38775883 + (TG)n Simple_repeat Simple_repeat 2 33 0 424 246 25 8 chr18 47213384 47213502 -38775432 + MER5A DNA MER1_type 7 126 -63 191 294 92 17 chr18 47213992 47214111 -38774823 + MIR SINE MIR 71 198 -64 5477 227 36 41 chr18 47214112 47216506 -38772428 + L1PA15 LINE L1 1061 3472 -3325 2351 114 0 0 chr18 47216511 47216819 -38772115 + AluSx SINE Alu 1 308 -4 44010 48 4 0 chr18 47216829 47222934 -38766000 + L1PA4 LINE L1 5 6134 -21 11928 195 24 21 chr18 47222934 47224710 -38764224 + L1PA15 LINE L1 3451 5220 -1596 2641 127 51 10 chr18 47224710 47225121 -38763813 - MSTA LTR MaLR 0 428 1 8894 178 69 3 chr18 47225121 47226670 -38762264 - MSTA-int LTR MaLR 0 1651 1 2428 142 50 43 chr18 47226670 47227093 -38761841 - MSTA LTR MaLR 0 428 3 11928 195 24 21 chr18 47227093 47228388 -38760546 + L1PA15 LINE L1 5220 6514 -302 2549 59 0 10 chr18 47228388 47228692 -38760242 - AluSp SINE Alu -12 301 1 11928 195 24 21 chr18 47228692 47228987 -38759947 + L1PA15 LINE L1 6514 6807 -9 31 58 0 0 chr18 47229106 47229158 -38759776 + AT_rich Low_complexity Low_complexity 1 52 0 1787 118 7 54 chr18 47229412 47229557 -38759377 + AluSx SINE Alu 1 151 -168 2332 96 3 0 chr18 47229557 47229848 -38759086 + AluY SINE Alu 1 292 -19 1787 118 7 54 chr18 47229848 47230035 -38758899 + AluSx SINE Alu 151 319 0 225 0 0 0 chr18 47230207 47230232 -38758702 + (A)n Simple_repeat Simple_repeat 1 25 0 822 174 0 7 chr18 47230250 47230388 -38758546 + FRAM SINE Alu 28 164 -12 2415 85 3 0 chr18 47230818 47231124 -38757810 - AluSp SINE Alu -6 307 1 213 159 23 0 chr18 47231142 47231186 -38757748 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 2294 105 0 3 chr18 47234181 47234487 -38754447 + AluSx SINE Alu 1 305 -7 321 257 128 0 chr18 47235930 47236039 -38752895 + L3 LINE CR1 1392 1514 -63 306 276 35 52 chr18 47236085 47236201 -38752733 - MIR3 SINE MIR -84 124 11 1941 128 0 70 chr18 47236423 47236735 -38752199 - AluSx SINE Alu -22 290 1 1972 158 0 0 chr18 47236766 47237063 -38751871 + AluSx SINE Alu 1 297 -15 2319 95 0 7 chr18 47237772 47238077 -38750857 - AluSx SINE Alu -9 303 1 1565 234 165 47 chr18 47238126 47238894 -38750040 - L1MEd LINE L1 -4914 1205 347 2239 124 44 44 chr18 47239083 47239447 -38749487 + THE1B LTR MaLR 1 364 0 3020 151 46 2 chr18 47239503 47240001 -38748933 - L1MC1 LINE L1 0 6333 5814 2322 99 0 0 chr18 47240318 47240620 -38748314 - AluSg SINE Alu -8 302 1 257 324 57 9 chr18 47240803 47240908 -38748026 - MIR3 SINE MIR -42 166 57 2147 123 0 0 chr18 47241136 47241428 -38747506 - AluSx SINE Alu -20 292 1 5053 163 30 21 chr18 47241781 47242732 -38746202 - L1MA7 LINE L1 -2 6289 5328 2435 88 0 0 chr18 47244779 47245076 -38743858 - AluY SINE Alu -14 297 1 1560 152 20 96 chr18 47245181 47245524 -38743410 + AluYb8 SINE Alu 1 317 -1 927 180 73 17 chr18 47245551 47245729 -38743205 + MER5A DNA MER1_type 2 189 0 351 226 32 77 chr18 47247386 47247429 -38741505 + MIR SINE MIR 115 158 -104 2035 123 3 3 chr18 47247429 47247730 -38741204 + AluSx SINE Alu 1 301 -11 351 226 32 77 chr18 47247730 47247841 -38741093 + MIR SINE MIR 158 262 0 1278 266 116 65 chr18 47248583 47249605 -38739329 + L1MEd LINE L1 258 1332 -5040 767 178 16 0 chr18 47249613 47249742 -38739192 + FAM SINE Alu 41 171 -14 724 293 26 44 chr18 47249742 47250012 -38738922 + L1MEd LINE L1 1266 1469 -4915 180 0 0 0 chr18 47250012 47250032 -38738902 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 724 293 26 44 chr18 47250032 47250292 -38738642 + L1MEd LINE L1 1469 1732 -4652 415 251 76 28 chr18 47250565 47250776 -38738158 + L1MEd LINE L1 2388 2608 -3774 390 285 54 51 chr18 47250879 47251017 -38737917 + L1MEd LINE L1 3093 3229 -3153 2555 156 26 12 chr18 47251017 47251435 -38737499 - MSTA LTR MaLR -4 424 1 390 285 54 51 chr18 47251435 47251612 -38737322 + L1MEd LINE L1 3229 3409 -2973 305 317 152 12 chr18 47251690 47252018 -38736916 + L1MEc LINE L1 1947 2320 -4076 * 356 266 16 16 chr18 47252010 47252134 -38736800 + L1M LINE L1 5290 5413 -757 216 237 86 43 chr18 47252134 47252227 -38736707 + MIR SINE MIR 156 252 -10 199 319 53 11 chr18 47252256 47252350 -38736584 - L2 LINE L2 -222 3050 2953 348 282 99 0 chr18 47255498 47255629 -38733305 + MIR SINE MIR 117 260 -2 2099 121 0 3 chr18 47256438 47256749 -38732185 + AluSx SINE Alu 1 310 0 1290 124 0 5 chr18 47256752 47256937 -38731997 + AluSc SINE Alu 121 304 -5 3897 161 22 20 chr18 47257266 47257954 -38730980 - L1MB5 LINE L1 0 6174 5486 197 81 0 27 chr18 47258571 47258608 -38730326 + (CTGGGG)n Simple_repeat Simple_repeat 2 37 0 706 221 7 127 chr18 47258848 47258978 -38729956 - MIR SINE MIR 0 262 192 1712 160 17 20 chr18 47258978 47259271 -38729663 - AluJo SINE Alu -20 292 1 706 221 7 127 chr18 47259271 47259423 -38729511 - MIR SINE MIR -70 192 23 216 0 0 0 chr18 47261544 47261568 -38727366 + (TG)n Simple_repeat Simple_repeat 2 25 0 22 0 0 0 chr18 47263163 47263185 -38725749 + AT_rich Low_complexity Low_complexity 1 22 0 223 300 29 0 chr18 47264386 47264456 -38724478 - MIR3 SINE MIR -3 205 134 1959 91 17 17 chr18 47264747 47265043 -38723891 - AluSg SINE Alu -10 300 5 334 229 14 0 chr18 47265162 47265232 -38723702 - MER96 DNA MER1_type? 0 175 105 197 329 29 0 chr18 47266805 47266875 -38722059 - L3 LINE CR1 0 1577 1506 1570 88 14 0 chr18 47266997 47267212 -38721722 + MER41B LTR ERV1 418 635 0 2145 99 20 0 chr18 47267302 47267604 -38721330 - AluSq SINE Alu -5 308 1 248 284 69 10 chr18 47268798 47268900 -38720034 + L1MC4 LINE L1 7694 7801 -241 4384 138 65 13 chr18 47269298 47269955 -38718979 - L1MA3 LINE L1 0 6305 5596 2035 118 14 0 chr18 47269955 47270251 -38718683 - AluSx SINE Alu -12 300 1 4384 138 65 13 chr18 47270251 47270411 -38718523 - L1MA3 LINE L1 -709 5596 5446 332 292 37 31 chr18 47271100 47271309 -38717625 - MIR SINE MIR -40 222 16 180 0 0 0 chr18 47271404 47271424 -38717510 + (CA)n Simple_repeat Simple_repeat 1 20 0 226 269 0 0 chr18 47272366 47272418 -38716516 + L2 LINE L2 2721 2772 -542 478 300 152 26 chr18 47272615 47272885 -38716049 + L2 LINE L2 3009 3312 -1 253 224 184 10 chr18 47274301 47274399 -38714535 + L2 LINE L2 3137 3251 -21 340 244 126 25 chr18 47274455 47274574 -38714360 + MIR SINE MIR 14 144 -118 389 337 47 12 chr18 47275269 47275441 -38713493 + MIR SINE MIR 84 261 -1 187 267 208 0 chr18 47275714 47275815 -38713119 + MER5A DNA MER1_type 64 185 -4 463 319 93 10 chr18 47276749 47276953 -38711981 - MIR SINE MIR -21 241 21 205 113 57 75 chr18 47277924 47277977 -38710957 - L3b LINE CR1 -355 1228 1177 3053 149 84 5 chr18 47278151 47278707 -38710227 - MER51D LTR ERV1 0 657 58 273 304 30 52 chr18 47278708 47278843 -38710091 - L3 LINE CR1 -658 919 788 416 314 47 41 chr18 47279078 47279247 -38709687 - L2 LINE L2 0 3272 3103 275 337 64 57 chr18 47279272 47279554 -38709380 + L2 LINE L2 2946 3229 -43 181 287 116 37 chr18 47279625 47279789 -38709145 - L2 LINE L2 -212 3101 2925 1870 147 13 0 chr18 47280234 47280541 -38708393 + AluSx SINE Alu 1 311 -1 299 289 52 0 chr18 47280549 47280646 -38708288 - MIR SINE MIR -83 179 78 209 218 36 0 chr18 47281319 47281374 -38707560 - L2 LINE L2 -3 3310 3254 206 194 113 32 chr18 47281355 47281417 -38707517 + MIR SINE MIR 45 111 -151 * 206 194 113 32 chr18 47281442 47281504 -38707430 + MIR SINE MIR 45 111 -151 689 248 81 10 chr18 47281529 47281727 -38707207 + MIR SINE MIR 45 256 -6 2056 94 28 0 chr18 47281815 47282103 -38706831 + AluSq SINE Alu 1 296 -17 398 210 0 37 chr18 47282221 47282302 -38706632 - L2 LINE L2 0 3313 3236 389 296 62 25 chr18 47282720 47282882 -38706052 + MIR3 SINE MIR 29 196 -12 2252 86 0 43 chr18 47282949 47283273 -38705661 + AluSg SINE Alu 1 310 0 321 309 114 42 chr18 47286114 47286350 -38702584 - MIR SINE MIR -4 258 6 252 235 235 0 chr18 47286523 47286608 -38702326 + MIR SINE MIR 47 151 -57 1988 141 0 3 chr18 47286632 47286936 -38701998 + AluSx SINE Alu 2 304 -8 523 254 43 65 chr18 47287304 47287489 -38701445 - MER5A DNA MER1_type -8 181 1 833 174 9 4 chr18 47288476 47288713 -38700221 + CT-rich Low_complexity Low_complexity 1 238 0 203 325 13 13 chr18 47289370 47289447 -38699487 + L2 LINE L2 2682 2758 -556 2182 82 0 0 chr18 47289472 47289753 -38699181 + AluY SINE Alu 17 297 -14 218 320 139 41 chr18 47289920 47290114 -38698820 + L2 LINE L2 3098 3310 -3 23 54 0 0 chr18 47290316 47290353 -38698581 + AT_rich Low_complexity Low_complexity 1 37 0 187 247 27 55 chr18 47290588 47290661 -38698273 + L2 LINE L2 2660 2730 -584 432 293 65 91 chr18 47290755 47291096 -38697838 + L2 LINE L2 2941 3272 0 4714 106 21 3 chr18 47291275 47291999 -38696935 - L1MA5A LINE L1 -6 6291 5555 1973 147 7 4 chr18 47292007 47292490 -38696444 - L1MA5A LINE L1 -743 5403 5006 347 302 146 24 chr18 47293887 47294092 -38694842 + MIR SINE MIR 20 249 -13 21 71 0 0 chr18 47294384 47294426 -38694508 + AT_rich Low_complexity Low_complexity 1 42 0 483 312 91 62 chr18 47294569 47294928 -38694006 + L1MC4a LINE L1 4797 5173 -973 2014 133 0 0 chr18 47294928 47295230 -38693704 + AluSx SINE Alu 1 302 -10 483 312 91 62 chr18 47295230 47295322 -38693612 + L1MC4a LINE L1 5173 5261 -885 627 276 76 82 chr18 47295350 47295958 -38692976 + L1MC4a LINE L1 5341 5944 -1864 2706 197 49 16 chr18 47296028 47296577 -38692357 + MLT1F1 LTR MaLR 1 567 0 6126 155 23 5 chr18 47296688 47298573 -38690361 - L1PB1 LINE L1 -1 6866 4946 353 257 113 40 chr18 47298702 47298921 -38690013 - MIR SINE MIR -3 259 12 403 331 41 7 chr18 47299185 47299330 -38689604 + MIR3 SINE MIR 51 200 -8 2266 227 54 33 chr18 47299330 47299996 -38688938 - L1MC4 LINE L1 -157 7885 7206 15473 36 2 4 chr18 47300038 47302661 -38686273 - L1PA4 LINE L1 -4 6151 3532 10285 176 48 15 chr18 47302662 47303165 -38685769 - L1PB1 LINE L1 -1869 4993 4508 1810 140 49 0 chr18 47303165 47303450 -38685484 - AluSx SINE Alu -13 299 1 10285 176 48 15 chr18 47303450 47307632 -38681302 - L1PB1 LINE L1 -2354 4508 6 242 342 150 0 chr18 47307838 47307958 -38680976 - MIR SINE MIR 0 262 125 954 246 86 75 chr18 47307960 47308533 -38680401 - L1ME LINE L1 -3516 2564 2018 1421 171 4 11 chr18 47308536 47308805 -38680129 - L1MD3 LINE L1 0 7995 7729 3002 267 103 32 chr18 47308820 47310695 -38678239 - L1ME LINE L1 -4105 1975 3 2179 135 3 0 chr18 47311422 47311726 -38677208 - AluSx SINE Alu -7 305 1 208 229 43 14 chr18 47312256 47312326 -38676608 + GA-rich Low_complexity Low_complexity 4 75 0 618 156 0 0 chr18 47312526 47312622 -38676312 + FLAM_A SINE Alu 30 125 -17 2263 111 3 0 chr18 47312629 47312917 -38676017 + AluSx SINE Alu 1 289 -23 615 186 81 8 chr18 47313560 47313684 -38675250 - FLAM_A SINE Alu 0 133 1 45199 40 3 1 chr18 47313755 47319894 -38669040 + L1PA4 LINE L1 1 6155 0 247 246 31 15 chr18 47320196 47320261 -38668673 - L1ME LINE L1 -583 5579 5514 257 260 82 41 chr18 47320432 47320578 -38668356 - MIR SINE MIR -46 216 65 4536 121 0 35 chr18 47321160 47321590 -38667344 - LTR8 LTR ERV1 -22 669 271 5831 50 1 19 chr18 47321590 47322328 -38666606 - L1PA6 LINE L1 0 6154 5430 4536 121 0 35 chr18 47322328 47322590 -38666344 - LTR8 LTR ERV1 -420 271 1 461 323 55 61 chr18 47322724 47323088 -38665846 - L1ME4a LINE L1 -157 5964 5599 198 0 0 0 chr18 47323088 47323110 -38665824 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 2257 109 0 0 chr18 47323112 47323405 -38665529 - AluSx SINE Alu -19 293 1 461 323 55 61 chr18 47323405 47323743 -38665191 - L1ME4a LINE L1 -523 5598 5263 1208 196 108 0 chr18 47323806 47324020 -38664914 - MER8 DNA MER2_type -1 238 2 1179 180 34 82 chr18 47324173 47324604 -38664330 - MLT1A2 LTR MaLR 0 374 2 243 280 176 8 chr18 47324676 47324801 -38664133 - MLT1J2 LTR MaLR -28 422 277 418 270 51 7 chr18 47324896 47325033 -38663901 - MLT1J1 LTR MaLR -303 143 1 28 0 0 0 chr18 47325189 47325217 -38663717 + AT_rich Low_complexity Low_complexity 1 28 0 706 200 0 22 chr18 47325428 47325563 -38663371 - FAM SINE Alu -42 143 12 2547 41 0 3 chr18 47325605 47325899 -38663035 - AluY SINE Alu -18 293 1 259 109 16 141 chr18 47326031 47326095 -38662839 + MER4A LTR ERV1 302 357 -307 * 580 169 291 14 chr18 47326067 47326280 -38662654 + MER4C LTR ERV1 176 447 -18 2017 122 30 3 chr18 47327870 47328174 -38660760 + AluSx SINE Alu 1 312 0 666 268 38 53 chr18 47328509 47328774 -38660160 + MLT1K LTR MaLR 3 263 -325 603 220 95 42 chr18 47329322 47329415 -38659519 + LTR50 LTR ERVL 1 88 -707 2323 95 0 13 chr18 47329415 47329719 -38659215 - AluSx SINE Alu -12 300 1 2110 110 41 0 chr18 47329719 47330010 -38658924 - AluSx SINE Alu -8 304 1 603 220 95 42 chr18 47330010 47330083 -38658851 + LTR50 LTR ERVL 87 177 -618 1226 309 27 27 chr18 47330396 47330842 -38658092 + MER115 DNA AcHobo 3 448 -245 2221 77 0 18 chr18 47331803 47332121 -38656813 - AluY SINE Alu 0 314 2 339 278 56 35 chr18 47333048 47333113 -38655821 + LTR67 LTR ERVL 411 473 -84 2171 116 3 3 chr18 47333113 47333414 -38655520 - AluSx SINE Alu -11 301 1 339 278 56 35 chr18 47333414 47333492 -38655442 + LTR67 LTR ERVL 473 557 0 236 258 123 55 chr18 47334100 47334263 -38654671 + MLT1K LTR MaLR 143 316 -272 243 122 49 0 chr18 47334532 47334573 -38654361 + MLT1K LTR MaLR 542 584 -4 1007 190 6 0 chr18 47335003 47335177 -38653757 + FRAM SINE Alu 1 166 -10 225 277 0 0 chr18 47335182 47335247 -38653687 + A-rich Low_complexity Low_complexity 1 65 0 2184 115 30 0 chr18 47335360 47335655 -38653279 + AluSx SINE Alu 1 304 -8 233 250 192 19 chr18 47337341 47337445 -38651489 - L2 LINE L2 0 3272 3151 1075 149 48 16 chr18 47337504 47337692 -38651242 - MER20 DNA MER1_type 0 219 26 269 257 115 18 chr18 47338416 47338529 -38650405 - MLT1J LTR MaLR 0 511 388 420 319 63 10 chr18 47338546 47338753 -38650181 - MLT1L LTR MaLR -201 414 197 2322 66 10 46 chr18 47339383 47339688 -38649246 - AluY SINE Alu -17 294 1 225 260 39 29 chr18 47339742 47339846 -38649088 + L1ME LINE L1 347 451 -5965 301 377 42 38 chr18 47340160 47340449 -38648485 + L1ME LINE L1 818 1107 -5309 2285 111 0 16 chr18 47340490 47340806 -38648128 + AluSx SINE Alu 1 311 -1 856 282 182 39 chr18 47340892 47341318 -38647616 + L1ME LINE L1 1037 1401 -5206 986 159 0 28 chr18 47341318 47341494 -38647440 + FAM SINE Alu 2 172 -3 856 282 182 39 chr18 47341494 47342006 -38646928 + L1ME LINE L1 1401 2295 -4312 2057 84 84 4 chr18 47342713 47342988 -38645946 + AluSq SINE Alu 2 298 -15 292 345 151 23 chr18 47343117 47343416 -38645518 - L2 LINE L2 0 3272 2936 712 201 53 0 chr18 47343618 47343787 -38645147 - MER5A DNA MER1_type -10 179 2 21 0 0 0 chr18 47344770 47344791 -38644143 + AT_rich Low_complexity Low_complexity 1 21 0 2105 115 7 7 chr18 47346124 47346411 -38642523 + AluSx SINE Alu 5 291 -21 1190 157 6 0 chr18 47346479 47346657 -38642277 + AluSg/x SINE Alu 82 260 -52 361 171 27 41 chr18 47346668 47346814 -38642120 + GA-rich Low_complexity Low_complexity 4 147 0 571 272 12 23 chr18 47347044 47347217 -38641717 - MLT1H1 LTR MaLR -2 553 383 232 266 273 0 chr18 47347283 47347426 -38641508 + MIR SINE MIR 24 205 -57 211 288 57 68 chr18 47348362 47348493 -38640441 + MIR SINE MIR 69 199 -63 2193 138 14 35 chr18 47348493 47348725 -38640209 + THE1B LTR MaLR 4 227 -137 2536 78 0 0 chr18 47348725 47349034 -38639900 + AluSq SINE Alu 1 309 -4 2193 138 14 35 chr18 47349034 47349170 -38639764 + THE1B LTR MaLR 227 364 0 211 288 57 68 chr18 47349170 47349215 -38639719 + MIR SINE MIR 199 243 -19 215 270 180 0 chr18 47349376 47349465 -38639469 + MIR SINE MIR 98 202 -60 375 329 195 24 chr18 47349505 47350504 -38638430 + L2 LINE L2 1686 2855 -459 306 244 44 11 chr18 47351459 47351549 -38637385 - MER5A DNA MER1_type -54 135 43 211 206 93 62 chr18 47351469 47351566 -38637368 + MER5B DNA MER1_type 65 164 -14 * 180 269 51 51 chr18 47351603 47351681 -38637253 - MIR SINE MIR -69 139 62 977 267 147 37 chr18 47352169 47352386 -38636548 + MLT1J LTR MaLR 64 256 -255 872 208 89 5 chr18 47352386 47352588 -38636346 - MER20 DNA MER1_type 0 219 1 977 267 147 37 chr18 47352588 47352771 -38636163 + MLT1J LTR MaLR 256 508 -3 1825 172 37 0 chr18 47352822 47353170 -38635764 + L1PA16 LINE L1 5806 6166 0 746 253 94 10 chr18 47353336 47353690 -38635244 - L1MC4 LINE L1 -949 7046 6652 1597 188 55 59 chr18 47353690 47354113 -38634821 + MLT1C LTR MaLR 1 494 -48 243 0 0 0 chr18 47354113 47354140 -38634794 + (CA)n Simple_repeat Simple_repeat 1 27 0 * 270 0 0 0 chr18 47354139 47354169 -38634765 + (TC)n Simple_repeat Simple_repeat 2 31 0 1181 106 0 25 chr18 47354558 47354755 -38634179 + AluSg/x SINE Alu 125 317 0 1201 305 34 27 chr18 47355716 47356159 -38632775 - MER115 DNA AcHobo -245 448 3 603 220 95 42 chr18 47356471 47356544 -38632390 - LTR50 LTR ERVL -618 177 109 2150 102 41 0 chr18 47356544 47356837 -38632097 + AluSx SINE Alu 1 305 -7 2323 95 0 13 chr18 47356837 47357140 -38631794 + AluSx SINE Alu 1 300 -12 603 220 95 42 chr18 47357140 47357233 -38631701 - LTR50 LTR ERVL -685 110 1 2335 101 0 0 chr18 47358113 47358410 -38630524 + AluSx SINE Alu 3 299 -13 831 268 62 93 chr18 47358869 47359720 -38629214 + L1ME4a LINE L1 5265 6090 -31 2207 120 3 0 chr18 47359720 47360012 -38628922 - AluSp SINE Alu -20 293 1 831 268 62 93 chr18 47360012 47360044 -38628890 + L1ME4a LINE L1 6090 6121 0 210 71 0 0 chr18 47360264 47360292 -38628642 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 440 290 51 6 chr18 47360318 47360491 -38628443 + MIR3 SINE MIR 5 188 -58 2226 111 0 38 chr18 47361147 47361327 -38627607 - AluSx SINE Alu -8 304 140 2116 110 10 7 chr18 47361327 47361659 -38627275 - AluSx SINE Alu 0 312 1 2226 111 0 38 chr18 47361659 47361794 -38627140 - AluSx SINE Alu -172 140 1 1124 196 72 0 chr18 47362532 47362741 -38626193 - MER58A DNA MER1_type 0 224 1 2372 99 0 0 chr18 47364271 47364573 -38624361 + AluSx SINE Alu 1 302 -10 294 331 73 40 chr18 47366173 47366297 -38622637 + MIR SINE MIR 1 128 -80 1956 129 43 0 chr18 47366341 47366620 -38622314 + AluSx SINE Alu 6 296 -16 185 154 26 26 chr18 47366702 47366741 -38622193 + L2 LINE L2 1169 1207 -2107 297 278 56 0 chr18 47367046 47367118 -38621816 - L2 LINE L2 -48 3224 3149 1975 132 31 0 chr18 47367231 47367547 -38621387 + AluSq SINE Alu 1 313 0 347 331 135 57 chr18 47367753 47368433 -38620501 - L2 LINE L2 -363 2951 2219 1939 139 10 17 chr18 47369598 47369900 -38619034 - AluJb SINE Alu -12 300 1 804 152 48 0 chr18 47371132 47371257 -38617677 + FLAM_C SINE Alu 2 132 -11 932 219 41 27 chr18 47371275 47371494 -38617440 + MIR SINE MIR 20 241 -21 2256 79 38 0 chr18 47371898 47372189 -38616745 + AluSg SINE Alu 1 302 -8 2488 59 0 13 chr18 47373174 47373477 -38615457 + AluY SINE Alu 1 299 -12 288 0 0 0 chr18 47374820 47374852 -38614082 + (CA)n Simple_repeat Simple_repeat 1 32 0 589 220 158 24 chr18 47375837 47376046 -38612888 + MIR SINE MIR 13 249 -13 243 257 57 9 chr18 47376210 47376315 -38612619 + L1ME4a LINE L1 6012 6121 0 225 234 97 117 chr18 47376347 47376501 -38612433 - MIR3 SINE MIR -17 191 41 476 173 143 12 chr18 47377354 47377522 -38611412 - Charlie7 DNA MER1_type -11 2601 2412 1628 200 103 42 chr18 47377522 47378096 -38610838 + L1MC5 LINE L1 7309 7917 -44 286 273 18 64 chr18 47378117 47378227 -38610707 - Charlie7 DNA MER1_type -2506 106 2 493 281 128 99 chr18 47379363 47379710 -38609224 + L2 LINE L2 2764 3124 -148 2237 97 3 7 chr18 47379710 47380009 -38608925 - AluSq SINE Alu -15 298 1 493 281 128 99 chr18 47380009 47380143 -38608791 + L2 LINE L2 3124 3253 -19 236 177 16 32 chr18 47380149 47380211 -38608723 + GA-rich Low_complexity Low_complexity 4 64 0 2304 109 0 0 chr18 47381723 47382017 -38606917 + AluSg SINE Alu 1 294 -16 824 164 79 85 chr18 47382871 47383036 -38605898 + FAM SINE Alu 6 169 -16 1416 135 0 14 chr18 47383050 47383257 -38605677 - AluJo SINE Alu -23 289 86 234 0 0 0 chr18 47384106 47384132 -38604802 + (TCTA)n Simple_repeat Simple_repeat 4 29 0 297 0 0 0 chr18 47384132 47384165 -38604769 + (CA)n Simple_repeat Simple_repeat 2 34 0 1782 141 0 40 chr18 47384183 47384341 -38604593 - AluSx SINE Alu -20 292 150 2367 72 0 23 chr18 47384341 47384646 -38604288 - AluY SINE Alu -13 298 1 1782 141 0 40 chr18 47384646 47384791 -38604143 - AluSx SINE Alu -162 150 1 252 315 14 0 chr18 47385732 47385805 -38603129 - L3 LINE CR1 -7 1570 1497 2244 125 0 10 chr18 47385860 47386173 -38602761 + AluSx SINE Alu 1 310 -2 292 307 67 40 chr18 47386354 47386504 -38602430 - MER5A DNA MER1_type 0 189 36 * 406 318 30 0 chr18 47386376 47386508 -38602426 + MER5A DNA MER1_type 34 169 -20 210 352 66 16 chr18 47387115 47387297 -38601637 - L2 LINE L2 -13 3300 3110 780 233 192 0 chr18 47387581 47387800 -38601134 - MIR SINE MIR 0 262 2 550 185 14 103 chr18 47387891 47388037 -38600897 + FLAM_A SINE Alu 1 133 0 2456 74 3 0 chr18 47388051 47388360 -38600574 + AluSp SINE Alu 1 310 -3 271 244 185 25 chr18 47388360 47388479 -38600455 + MIR SINE MIR 119 256 -6 259 377 41 8 chr18 47390023 47390145 -38598789 + MER5A DNA MER1_type 58 183 -6 270 307 154 47 chr18 47391025 47391196 -38597738 - MIR3 SINE MIR -15 193 3 1265 158 98 0 chr18 47391304 47391519 -38597415 - MER46A DNA MER2_type 0 236 1 404 210 51 116 chr18 47392535 47392569 -38596365 - MIR SINE MIR -35 227 192 2753 17 0 0 chr18 47392569 47392866 -38596068 - AluY SINE Alu -14 297 1 404 210 51 116 chr18 47392866 47392969 -38595965 - MIR SINE MIR -70 192 99 300 268 170 0 chr18 47393210 47393322 -38595612 - L2 LINE L2 0 3313 3183 2260 142 70 8 chr18 47393475 47393876 -38595058 - MSTB1 LTR MaLR 0 432 7 360 219 219 46 chr18 47393988 47394139 -38594795 - MER5B DNA MER1_type -1 177 1 193 306 188 12 chr18 47394500 47394585 -38594349 - L2 LINE L2 0 3272 3173 2165 65 0 8 chr18 47394768 47395031 -38593903 + L1PA6 LINE L1 5894 6154 0 564 241 118 46 chr18 47395909 47396104 -38592830 + MER63A DNA MER1_type 2 210 0 2067 141 7 0 chr18 47396806 47397103 -38591831 + AluSx SINE Alu 6 304 -8 264 347 21 0 chr18 47397738 47397833 -38591101 - MIR SINE MIR 0 262 166 701 160 84 0 chr18 47397833 47397952 -38590982 + FLAM_A SINE Alu 6 134 -8 613 209 37 0 chr18 47397990 47398124 -38590810 - MIR SINE MIR -123 139 1 2265 113 0 7 chr18 47398243 47398552 -38590382 + AluSx SINE Alu 1 307 -5 322 201 50 132 chr18 47399344 47399503 -38589431 + L1MC5 LINE L1 7763 7908 -53 2015 95 56 33 chr18 47399599 47399904 -38589030 + AluSx SINE Alu 1 312 0 2453 70 0 22 chr18 47400080 47400393 -38588541 - AluY SINE Alu -5 306 1 2167 201 24 95 chr18 47400414 47400648 -38588286 + L1MB8 LINE L1 5551 5800 -378 375 23 0 0 chr18 47400648 47400692 -38588242 + (CA)n Simple_repeat Simple_repeat 2 45 0 2167 201 24 95 chr18 47400692 47400966 -38587968 + L1MB8 LINE L1 5800 6002 -176 2266 83 0 60 chr18 47400966 47401280 -38587654 + AluSq SINE Alu 1 295 -18 2167 201 24 95 chr18 47401280 47401446 -38587488 + L1MB8 LINE L1 6002 6178 0 235 225 217 58 chr18 47402565 47402703 -38586231 - MER112 DNA MER1_type -83 177 18 351 358 49 8 chr18 47403236 47403359 -38585575 - MIR SINE MIR -64 144 17 206 329 0 53 chr18 47403997 47404073 -38584861 + L3 LINE CR1 1489 1560 -17 2223 118 0 3 chr18 47404605 47404909 -38584025 + AluSx SINE Alu 1 303 -9 24 32 0 0 chr18 47404909 47404940 -38583994 + AT_rich Low_complexity Low_complexity 1 31 0 1908 158 30 0 chr18 47406450 47406753 -38582181 + AluSx SINE Alu 1 312 0 2097 132 3 0 chr18 47407061 47407371 -38581563 + AluSx SINE Alu 1 311 -1 203 182 0 0 chr18 47408229 47408262 -38580672 + (TATG)n Simple_repeat Simple_repeat 3 35 0 2245 104 3 0 chr18 47408314 47408601 -38580333 + AluSq SINE Alu 1 288 -25 399 337 8 8 chr18 47409052 47409201 -38579733 - MER5A DNA MER1_type 0 189 30 2215 120 23 0 chr18 47409499 47409798 -38579136 + AluSx SINE Alu 1 306 -6 28 29 0 0 chr18 47409828 47409863 -38579071 + AT_rich Low_complexity Low_complexity 1 35 0 518 235 13 0 chr18 47410271 47410424 -38578510 + (CATATA)n Simple_repeat Simple_repeat 4 158 0 237 203 40 14 chr18 47410425 47410474 -38578460 - L1MC4 LINE L1 -1339 6703 6650 2294 91 0 0 chr18 47410474 47410760 -38578174 - AluSx SINE Alu -26 286 1 237 203 40 14 chr18 47410760 47410784 -38578150 - L1MC4 LINE L1 -1392 6650 6628 2138 138 0 3 chr18 47411232 47411537 -38577397 + AluSx SINE Alu 1 304 -8 329 244 51 90 chr18 47411727 47411883 -38577051 - MIR SINE MIR -64 198 49 2766 253 87 39 chr18 47412880 47413621 -38575313 - L2 LINE L2 0 3313 2609 455 206 71 98 chr18 47413621 47413805 -38575129 + MER104 DNA MER2_type 2 180 0 2766 253 87 39 chr18 47413805 47414558 -38574376 - L2 LINE L2 -704 2609 1765 2185 115 0 3 chr18 47414994 47415289 -38573645 + AluSx SINE Alu 1 294 -18 2179 121 3 3 chr18 47415373 47415679 -38573255 + AluSx SINE Alu 1 306 -6 200 289 0 12 chr18 47415769 47415852 -38573082 - L2 LINE L2 -1629 1685 1604 2551 48 0 0 chr18 47416692 47416987 -38571947 + AluY SINE Alu 1 295 -16 2211 122 0 0 chr18 47417525 47417821 -38571113 + AluSx SINE Alu 1 296 -16 252 167 78 78 chr18 47418328 47418418 -38570516 - MER5B DNA MER1_type -72 106 17 699 280 131 0 chr18 47419463 47419677 -38569257 + MIR SINE MIR 2 243 -19 2311 98 0 0 chr18 47420185 47420480 -38568454 + AluSc SINE Alu 1 295 -14 2267 116 0 7 chr18 47420825 47421127 -38567807 - AluSx SINE Alu -12 300 1 24 32 0 0 chr18 47422402 47422433 -38566501 + AT_rich Low_complexity Low_complexity 1 31 0 737 161 128 28 chr18 47423212 47423307 -38565627 - Tigger4(Zombi) DNA MER2_type -10 2721 2637 2556 93 3 35 chr18 47423307 47423674 -38565260 + THE1A LTR MaLR 1 355 0 737 161 128 28 chr18 47423674 47423848 -38565086 - Tigger4(Zombi) DNA MER2_type -94 2637 1 1668 155 3 23 chr18 47424513 47424816 -38564118 - AluSx SINE Alu -15 297 1 2183 111 0 3 chr18 47425949 47426238 -38562696 + AluSg SINE Alu 1 288 -22 1047 283 30 12 chr18 47426998 47427330 -38561604 + MER102b DNA MER1_type 4 341 0 2565 189 138 56 chr18 47428814 47429506 -38559428 + L1MC4a LINE L1 6897 7670 -138 2096 77 81 3 chr18 47429506 47429791 -38559143 - AluY SINE Alu -4 307 1 2565 189 138 56 chr18 47429791 47429932 -38559002 + L1MC4a LINE L1 7670 7798 -10 23 33 0 0 chr18 47430039 47430069 -38558865 + AT_rich Low_complexity Low_complexity 1 30 0 986 250 20 16 chr18 47430792 47431044 -38557890 + MER102a DNA MER1_type 78 330 0 3212 193 64 12 chr18 47431105 47431905 -38557029 + L1M4 LINE L1 4350 5190 -956 2566 82 6 0 chr18 47431917 47432245 -38556689 + LTR8 LTR ERV1 361 690 -1 1201 101 0 0 chr18 47432245 47432404 -38556530 + AluSg/x SINE Alu 130 288 -24 1972 95 7 61 chr18 47432421 47432754 -38556180 + AluSc SINE Alu 1 317 0 1994 114 7 7 chr18 47432754 47433026 -38555908 + AluSq SINE Alu 1 272 -41 731 134 54 0 chr18 47433060 47433172 -38555762 + FLAM_C SINE Alu 1 118 -15 22 0 0 0 chr18 47433174 47433196 -38555738 + AT_rich Low_complexity Low_complexity 1 22 0 733 255 7 0 chr18 47433338 47433491 -38555443 - FAM SINE Alu -17 158 5 230 320 26 0 chr18 47433716 47433794 -38555140 + L1ME4a LINE L1 5965 6044 -77 2037 213 127 21 chr18 47433966 47434636 -38554298 + L2 LINE L2 2276 3069 -244 2247 97 17 7 chr18 47434636 47434934 -38554000 + AluSq SINE Alu 1 301 -12 2037 213 127 21 chr18 47434934 47435209 -38553725 + L2 LINE L2 3069 3313 0 478 297 158 14 chr18 47436158 47436444 -38552490 - L2 LINE L2 -77 3195 2951 1778 148 7 0 chr18 47436444 47436721 -38552213 + AluSx SINE Alu 33 311 -1 478 297 158 14 chr18 47436721 47437077 -38551857 - L2 LINE L2 -321 2951 2460 243 323 73 0 chr18 47437369 47437465 -38551469 + MIR SINE MIR 30 132 -76 2059 102 53 0 chr18 47437743 47438028 -38550906 + AluSq SINE Alu 1 300 -13 2374 161 8 2 chr18 47438131 47438528 -38550406 + L1PA15 LINE L1 5767 6165 0 2249 84 3 26 chr18 47438833 47439144 -38549790 + AluSx SINE Alu 5 308 -4 2479 53 0 23 chr18 47439148 47439452 -38549482 + AluY SINE Alu 1 297 -14 246 256 67 0 chr18 47439455 47439545 -38549389 + L1MC4 LINE L1 6614 6709 -1333 213 318 147 8 chr18 47440800 47440929 -38548005 + MIR SINE MIR 114 260 -2 359 200 50 64 chr18 47441138 47441278 -38547656 + L2 LINE L2 3168 3305 -8 2367 77 13 6 chr18 47441335 47441646 -38547288 + AluSq SINE Alu 1 313 0 336 48 0 0 chr18 47441885 47441927 -38547007 + (TG)n Simple_repeat Simple_repeat 2 43 0 2021 119 3 45 chr18 47442356 47442666 -38546268 + AluSx SINE Alu 1 297 -15 2047 109 20 10 chr18 47443266 47443559 -38545375 + AluSx SINE Alu 1 296 -16 2358 82 27 0 chr18 47443883 47444176 -38544758 + AluSc SINE Alu 1 301 -8 23 33 0 0 chr18 47444239 47444269 -38544665 + AT_rich Low_complexity Low_complexity 1 30 0 2066 111 0 71 chr18 47444458 47444783 -38544151 + AluSx SINE Alu 1 302 -10 249 33 0 0 chr18 47444921 47444951 -38543983 + (A)n Simple_repeat Simple_repeat 1 30 0 189 0 0 0 chr18 47445080 47445101 -38543833 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 186 229 145 24 chr18 47445994 47446077 -38542857 + MIR SINE MIR 26 118 -90 424 185 226 34 chr18 47446361 47446507 -38542427 + MER5B DNA MER1_type 1 174 -4 205 250 0 50 chr18 47446631 47446691 -38542243 - MIR SINE MIR -81 181 125 347 228 193 35 chr18 47447206 47447351 -38541583 + MER5B DNA MER1_type 6 173 -5 562 170 163 41 chr18 47447385 47447532 -38541402 + MER5A DNA MER1_type 16 180 -9 192 275 55 55 chr18 47447910 47448001 -38540933 - MIR SINE MIR -66 196 106 352 235 210 0 chr18 47448086 47448205 -38540729 + MER5A DNA MER1_type 46 189 0 2195 120 0 0 chr18 47448322 47448613 -38540321 - AluSg1 SINE Alu -18 291 1 326 300 200 25 chr18 47449003 47449163 -38539771 - MIR3 SINE MIR -6 202 15 1637 188 0 30 chr18 47450497 47450795 -38538139 - AluJo SINE Alu -23 289 1 2240 122 0 0 chr18 47452045 47452339 -38536595 - AluSx SINE Alu -18 294 1 608 226 36 0 chr18 47452823 47452960 -38535974 - MIR3 SINE MIR -12 196 55 345 128 0 39 chr18 47453040 47453118 -38535816 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 2102 107 6 55 chr18 47453121 47453448 -38535486 - AluSx SINE Alu -1 311 1 275 169 85 0 chr18 47454626 47454685 -38534249 - MIR SINE MIR -72 136 73 24 32 0 0 chr18 47454792 47454823 -38534111 + AT_rich Low_complexity Low_complexity 1 31 0 564 200 0 0 chr18 47455026 47455131 -38533803 - MER117 DNA MER1_type -49 148 44 206 287 174 9 chr18 47455863 47455978 -38532956 + MIR3 SINE MIR 8 141 -67 462 327 96 26 chr18 47458929 47459388 -38529546 - L3 LINE CR1 -1 1576 1086 1636 96 4 22 chr18 47459653 47459919 -38529015 + AluSq SINE Alu 59 320 0 625 292 83 25 chr18 47460464 47460896 -38528038 + HAL1 LINE L1 1113 1569 -938 1809 89 4 16 chr18 47461441 47461689 -38527245 - AluY SINE Alu -6 305 61 853 329 65 37 chr18 47461730 47462134 -38526800 + L1MEc LINE L1 2063 2454 -3761 2523 55 0 0 chr18 47462134 47462443 -38526491 + AluY SINE Alu 1 309 -2 853 329 65 37 chr18 47462443 47463096 -38525838 + L1MEc LINE L1 2454 3155 -3060 365 291 65 24 chr18 47463111 47463448 -38525486 + L1MEc LINE L1 3202 3552 -2663 248 272 87 10 chr18 47464260 47464363 -38524571 + L3 LINE CR1 1460 1570 -7 1096 222 28 0 chr18 47464775 47464991 -38523943 + MER58A DNA MER1_type 1 222 -2 201 162 0 0 chr18 47464992 47465029 -38523905 + (TA)n Simple_repeat Simple_repeat 2 38 0 3967 69 58 0 chr18 47465259 47465780 -38523154 + L1PA8 LINE L1 5616 6166 -6 1551 153 59 11 chr18 47466822 47467109 -38521825 + AluJb SINE Alu 1 301 -11 187 320 0 53 chr18 47468299 47468374 -38520560 - L2 LINE L2 -5 3267 3197 492 270 76 11 chr18 47468521 47468706 -38520228 + MIR SINE MIR 33 229 -33 279 333 147 0 chr18 47468870 47468999 -38519935 + L2 LINE L2 3161 3308 -5 376 272 14 41 chr18 47469827 47469983 -38518951 + L1MC4 LINE L1 7880 8042 0 1520 146 94 29 chr18 47470349 47470624 -38518310 - AluSx SINE Alu -16 296 4 383 236 224 18 chr18 47471719 47471884 -38517050 + MIR3 SINE MIR 3 201 -7 630 178 170 7 chr18 47471978 47472113 -38516821 - MER5B DNA MER1_type 0 178 22 465 191 24 0 chr18 47472912 47472996 -38515938 - MER20 DNA MER1_type -132 87 2 326 276 92 69 chr18 47473078 47473295 -38515639 + L2 LINE L2 3088 3309 -4 211 278 52 87 chr18 47474218 47474333 -38514601 + MIR SINE MIR 20 130 -132 3386 295 94 31 chr18 47474430 47476421 -38512513 + L2 LINE L2 1208 3313 0 188 286 14 14 chr18 47477203 47477273 -38511661 + MIR3 SINE MIR 130 199 -9 252 327 137 0 chr18 47477425 47477587 -38511347 + MIR SINE MIR 68 262 0 2362 79 0 0 chr18 47477663 47477966 -38510968 + AluY SINE Alu 1 303 -8 195 280 75 32 chr18 47478343 47478436 -38510498 + MIR SINE MIR 158 254 -8 345 24 0 0 chr18 47478469 47478511 -38510423 + (CA)n Simple_repeat Simple_repeat 2 43 0 1816 138 10 17 chr18 47478721 47479017 -38509917 + AluJb SINE Alu 1 294 -18 281 252 35 70 chr18 47479366 47479481 -38509453 + L2 LINE L2 3201 3311 -2 319 244 64 32 chr18 47480972 47481128 -38507806 - MIR3 SINE MIR -1 207 47 213 341 11 0 chr18 47481603 47481691 -38507243 + MIR SINE MIR 58 146 -62 392 217 67 123 chr18 47481773 47482026 -38506908 + MER112 DNA MER1_type 17 255 -5 260 269 83 104 chr18 47482040 47482168 -38506766 + MER5A DNA MER1_type 1 125 -64 2252 114 0 0 chr18 47482168 47482476 -38506458 - AluSc SINE Alu -1 308 1 260 269 83 104 chr18 47482476 47482540 -38506394 + MER5A DNA MER1_type 125 189 0 1991 125 30 3 chr18 47482609 47482913 -38506021 - AluSx SINE Alu 0 312 1 192 224 15 75 chr18 47483182 47483249 -38505685 + L2 LINE L2 3168 3230 -83 226 255 0 0 chr18 47484372 47484419 -38504515 + L2 LINE L2 3226 3272 0 719 193 43 19 chr18 47485157 47485318 -38503616 - Charlie4 DNA MER1_type 0 1961 1797 265 157 59 0 chr18 47485334 47485385 -38503549 - Charlie4 DNA MER1_type -1676 285 232 761 321 156 26 chr18 47487075 47487766 -38501168 + L2 LINE L2 469 1249 -2065 857 305 173 23 chr18 47487771 47489040 -38499894 + L2 LINE L2 1819 3308 -5 642 167 99 12 chr18 47489710 47489872 -38499062 - MER104 DNA MER2_type -1 179 4 197 138 0 0 chr18 47490744 47490773 -38498161 + L2 LINE L2 3223 3251 -21 2327 96 0 0 chr18 47491941 47492253 -38496681 - AluSq SINE Alu -1 312 1 359 341 148 19 chr18 47492441 47492766 -38496168 - L3 LINE CR1 -66 1511 1145 1915 129 7 3 chr18 47493529 47493824 -38495110 - AluSx SINE Alu -16 296 1 26 0 0 0 chr18 47494329 47494355 -38494579 + AT_rich Low_complexity Low_complexity 1 26 0 303 28 0 0 chr18 47494767 47494803 -38494131 + (TC)n Simple_repeat Simple_repeat 1 36 0 279 191 0 0 chr18 47494803 47494866 -38494068 + (CA)n Simple_repeat Simple_repeat 2 64 0 937 230 60 57 chr18 47494911 47494966 -38493968 + MIR SINE MIR 11 64 -198 1881 150 20 68 chr18 47494966 47495360 -38493574 - THE1C LTR MaLR 0 375 1 10365 111 16 41 chr18 47495360 47495543 -38493391 - THE1C-int LTR MaLR 0 1580 1394 2109 113 7 0 chr18 47495543 47495845 -38493089 + AluSx SINE Alu 1 304 -8 10365 111 16 41 chr18 47495845 47497281 -38491653 - THE1C-int LTR MaLR -186 1394 1 1740 167 31 52 chr18 47497281 47497318 -38491616 - THE1C LTR MaLR 0 375 339 2202 62 48 0 chr18 47497318 47497607 -38491327 + AluY SINE Alu 1 303 -8 1740 167 31 52 chr18 47497607 47497952 -38490982 - THE1C LTR MaLR -36 339 1 937 230 60 57 chr18 47497952 47498142 -38490792 + MIR SINE MIR 63 259 -3 294 218 0 0 chr18 47498609 47498664 -38490270 + L2 LINE L2 3258 3312 -1 819 195 47 18 chr18 47500126 47500295 -38488639 - MER5B DNA MER1_type -4 174 1 386 174 287 9 chr18 47500366 47500481 -38488453 + MER5A DNA MER1_type 33 179 -10 204 254 16 16 chr18 47501334 47501397 -38487537 + GA-rich Low_complexity Low_complexity 2 64 0 292 198 176 22 chr18 47502479 47502570 -38486364 - L2 LINE L2 -5 3308 3204 1598 205 58 3 chr18 47502686 47503013 -38485921 + MLT1F LTR MaLR 178 522 -20 272 263 138 12 chr18 47503153 47503233 -38485701 - MIR SINE MIR -3 259 170 243 79 0 0 chr18 47503868 47503906 -38485028 + (T)n Simple_repeat Simple_repeat 1 38 0 260 308 66 40 chr18 47504150 47504348 -38484586 + LTR67 LTR ERVL 352 554 -3 379 290 0 12 chr18 47504874 47504984 -38483950 + MIR3 SINE MIR 1 107 -107 732 302 128 52 chr18 47505286 47505921 -38483013 + Charlie7 DNA MER1_type 1 683 -1929 358 223 25 33 chr18 47505904 47506025 -38482909 + Charlie7 DNA MER1_type 2493 2612 0 * 313 353 0 0 chr18 47508382 47508467 -38480467 - MIR SINE MIR -2 260 176 297 291 51 0 chr18 47509361 47509440 -38479494 - MIR SINE MIR -56 152 70 213 236 135 95 chr18 47509555 47509703 -38479231 + MIR SINE MIR 1 154 -108 1733 239 71 57 chr18 47509712 47510554 -38478380 + MER45C DNA AcHobo 1 948 -5 287 173 13 80 chr18 47510559 47510615 -38478319 + MIR SINE MIR 156 207 -55 2172 103 94 21 chr18 47510615 47510954 -38477980 + THE1B LTR MaLR 1 364 0 287 173 13 80 chr18 47510954 47510972 -38477962 + MIR SINE MIR 207 225 -37 21 0 0 0 chr18 47511532 47511553 -38477381 + AT_rich Low_complexity Low_complexity 1 21 0 298 327 18 0 chr18 47511820 47511930 -38477004 - MIR SINE MIR -63 145 34 951 189 171 0 chr18 47511971 47512199 -38476735 - ORSL DNA AcHobo -4 271 5 1066 258 36 11 chr18 47512717 47513081 -38475853 + L2 LINE L2 2478 2850 -464 2138 109 29 29 chr18 47513283 47513596 -38475338 - AluSq SINE Alu 0 313 1 942 252 30 15 chr18 47513764 47514034 -38474900 + MLT2C1 LTR ERVL 1 274 -123 293 239 184 9 chr18 47515237 47515346 -38473588 + MIR SINE MIR 135 262 0 2346 84 3 0 chr18 47518005 47518302 -38470632 - AluY SINE Alu -11 300 3 1206 155 33 5 chr18 47518305 47518518 -38470416 - MER4A LTR ERV1 -444 220 2 9331 30 2 2 chr18 47518545 47519614 -38469320 + MER11C LTR ERVK 1 1069 -2 383 349 17 11 chr18 47519945 47520120 -38468814 + MARNA DNA Mariner 61 236 -350 889 159 162 68 chr18 47520429 47520725 -38468209 - MER33 DNA MER1_type 0 324 1 891 249 116 54 chr18 47521646 47522035 -38466899 + MLT1L LTR MaLR 198 610 -5 246 267 220 13 chr18 47522143 47522293 -38466641 + L2 LINE L2 3133 3313 0 209 233 127 53 chr18 47522341 47522491 -38466443 - L2 LINE L2 -823 2491 2331 496 301 92 35 chr18 47522624 47523034 -38465900 + L2 LINE L2 2414 3039 -274 252 0 0 0 chr18 47525312 47525340 -38463594 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 1688 143 18 39 chr18 47525340 47525619 -38463315 - AluJo SINE Alu -25 287 13 332 70 0 18 chr18 47525726 47525783 -38463151 + (TTTTG)n Simple_repeat Simple_repeat 2 57 0 1927 145 0 3 chr18 47525786 47526069 -38462865 - AluJb SINE Alu -30 282 1 343 322 7 20 chr18 47527943 47528089 -38460845 + MER5B DNA MER1_type 17 160 -18 557 261 177 10 chr18 47528854 47529057 -38459877 + MIR SINE MIR 15 251 -11 2401 80 0 22 chr18 47529406 47529720 -38459214 - AluY SINE Alu -4 307 1 281 233 147 9 chr18 47530174 47530290 -38458644 + MIR SINE MIR 12 143 -119 620 289 55 61 chr18 47531311 47531622 -38457312 + L1MC/D LINE L1 5465 5773 -2035 2200 107 3 3 chr18 47531875 47532164 -38456770 - AluSc SINE Alu -20 289 1 440 286 95 71 chr18 47532277 47532770 -38456164 + HAL1 LINE L1 1153 1657 -850 2055 120 0 4 chr18 47532832 47533108 -38455826 + AluSx SINE Alu 20 294 -18 787 188 18 76 chr18 47533445 47533668 -38455266 - MIR SINE MIR -33 229 20 1093 185 10 15 chr18 47533742 47533942 -38454992 + MLT1D LTR MaLR 1 199 -306 2207 103 0 31 chr18 47534141 47534460 -38454474 + AluSg SINE Alu 1 309 -1 2254 104 0 31 chr18 47534470 47534788 -38454146 + AluSc SINE Alu 2 309 0 242 172 103 0 chr18 47534821 47534879 -38454055 - Tigger3(Golem) DNA MER2_type -816 2213 2150 267 237 41 10 chr18 47536076 47536173 -38452761 + MIR3 SINE MIR 90 189 -19 394 227 0 0 chr18 47536216 47536291 -38452643 + MER5A DNA MER1_type 1 75 -114 1857 133 11 18 chr18 47536294 47536573 -38452361 + AluJo SINE Alu 6 282 -30 594 103 0 0 chr18 47536576 47536663 -38452271 - Alu SINE Alu 0 311 225 506 202 58 0 chr18 47536708 47536812 -38452122 + MER5A DNA MER1_type 80 189 0 199 306 46 46 chr18 47537300 47537408 -38451526 - MIR3 SINE MIR -90 118 11 860 201 77 0 chr18 47539249 47539443 -38449491 + MER3 DNA MER1_type 1 209 0 545 215 86 18 chr18 47539849 47540012 -38448922 - MER5A DNA MER1_type 0 189 5 681 213 7 0 chr18 47541750 47541900 -38447034 + MER5A DNA MER1_type 39 189 0 487 261 0 0 chr18 47541908 47542023 -38446911 + MER5B DNA MER1_type 2 116 -62 362 80 0 18 chr18 47542043 47542100 -38446834 + L1P4 LINE L1 5664 5714 -452 489 147 0 0 chr18 47542291 47542386 -38446548 + (TCC)n Simple_repeat Simple_repeat 2 96 0 745 171 0 23 chr18 47542415 47542544 -38446390 - FRAM SINE Alu -58 118 1 639 172 52 8 chr18 47542544 47542678 -38446256 - L1MB3 LINE L1 -57 6126 5987 2361 119 3 0 chr18 47543066 47543402 -38445532 - MER1B DNA MER1_type 0 337 1 2315 168 25 10 chr18 47543879 47544284 -38444650 - L1PA16 LINE L1 -22 6144 5734 24 67 0 0 chr18 47547302 47547347 -38441587 + AT_rich Low_complexity Low_complexity 1 45 0 694 224 0 0 chr18 47550469 47550614 -38438320 - FLAM_C SINE Alu 0 145 1 316 245 20 31 chr18 47551258 47551356 -38437578 - MIR3 SINE MIR -3 205 109 343 184 23 0 chr18 47553705 47553792 -38435142 + (TA)n Simple_repeat Simple_repeat 2 90 0 319 253 22 11 chr18 47553793 47553884 -38435050 + L1MC4 LINE L1 6614 6705 -1337 25 0 0 0 chr18 47553884 47553909 -38435025 + AT_rich Low_complexity Low_complexity 1 25 0 344 167 30 0 chr18 47554420 47554486 -38434448 - MIR SINE MIR -108 154 87 455 288 39 7 chr18 47554833 47554986 -38433948 + MIR SINE MIR 25 182 -80 436 234 75 75 chr18 47556703 47556891 -38432043 + MER91B DNA MER1_type 3 190 0 22 35 0 0 chr18 47556894 47556923 -38432011 + AT_rich Low_complexity Low_complexity 1 29 0 2305 123 3 0 chr18 47556947 47557257 -38431677 - AluSx SINE Alu 0 312 2 458 141 0 0 chr18 47557269 47557340 -38431594 - tRNA-Glu-GAG tRNA tRNA -3 72 2 695 164 0 0 chr18 47559618 47559728 -38429206 - AluJo SINE Alu -181 131 22 716 189 92 12 chr18 47560637 47560801 -38428133 - MER5B DNA MER1_type 0 178 2 202 279 123 39 chr18 47560854 47561022 -38427912 + MIR SINE MIR 27 198 -28 422 167 31 10 chr18 47561252 47561348 -38427586 + MER5A DNA MER1_type 9 106 -83 317 298 73 33 chr18 47562270 47562421 -38426513 + L2 LINE L2 3116 3272 0 2178 107 27 3 chr18 47564240 47564538 -38424396 + AluSx SINE Alu 1 305 -7 2049 240 100 24 chr18 47565209 47565317 -38423617 + L1ME3A LINE L1 5480 5578 -592 1907 112 56 33 chr18 47565317 47565621 -38423313 + AluSx SINE Alu 1 311 -1 2049 240 100 24 chr18 47565621 47566155 -38422779 + L1ME3A LINE L1 5578 6169 -1 210 287 70 28 chr18 47566184 47566327 -38422607 - L2 LINE L2 -952 2362 2214 2378 181 22 17 chr18 47567707 47568166 -38420768 + LOR1b LTR ERV1 1 461 0 660 177 14 34 chr18 47568453 47568600 -38420334 + L1ME3A LINE L1 6027 6170 0 572 170 0 7 chr18 47569226 47569367 -38419567 + (CCA)n Simple_repeat Simple_repeat 1 140 0 420 113 0 0 chr18 47569475 47569546 -38419388 + Alu SINE Alu 238 308 -4 1819 130 171 9 chr18 47569547 47569886 -38419048 - MSTA LTR MaLR -34 394 1 1496 193 3 50 chr18 47570169 47570470 -38418464 - AluJo SINE Alu -16 296 10 607 168 0 0 chr18 47570478 47570585 -38418349 - L1 LINE L1 -2458 3688 3582 494 266 9 0 chr18 47571176 47571289 -38417645 + FLAM_C SINE Alu 5 118 -25 293 355 30 6 chr18 47571395 47571564 -38417370 + L1ME1 LINE L1 5450 5622 -2186 678 60 12 0 chr18 47573029 47573113 -38415821 - AluSq/x SINE Alu -190 123 39 562 198 0 0 chr18 47573112 47573208 -38415726 - FLAM_A SINE Alu -26 116 21 * 256 250 0 45 chr18 47573246 47573334 -38415600 + L1ME1 LINE L1 3492 3575 -2571 1762 238 57 15 chr18 47573518 47573977 -38414957 + L1ME1 LINE L1 5408 5885 -281 1007 222 30 21 chr18 47575155 47575389 -38413545 + AluJo SINE Alu 1 236 -76 9958 34 4 2 chr18 47575490 47576671 -38412263 + L1P LINE L1 3885 5068 -1078 336 247 0 0 chr18 47577900 47577989 -38410945 + MIR SINE MIR 166 254 -8 210 37 0 0 chr18 47578205 47578232 -38410702 + (T)n Simple_repeat Simple_repeat 1 27 0 224 295 0 53 chr18 47578513 47578608 -38410326 + MIR SINE MIR 40 129 -79 1347 160 56 20 chr18 47579062 47579348 -38409586 - L1MA9 LINE L1 -210 6081 5791 261 83 0 0 chr18 47579348 47579384 -38409550 + (CA)n Simple_repeat Simple_repeat 1 36 0 1347 160 56 20 chr18 47579384 47579411 -38409523 - L1MA9 LINE L1 -500 5791 5766 722 255 68 0 chr18 47579433 47579594 -38409340 - AluJo SINE Alu -54 258 87 1956 127 7 0 chr18 47579594 47579869 -38409065 - AluSg SINE Alu -33 277 1 1359 188 8 0 chr18 47579870 47580125 -38408809 - L1MA9 LINE L1 -585 5727 5471 232 143 0 0 chr18 47580241 47580276 -38408658 + MER41A LTR ERV1 518 552 -2 348 292 43 38 chr18 47580280 47580489 -38408445 + L1ME1 LINE L1 5843 6052 -114 936 230 14 19 chr18 47580588 47580801 -38408133 + MER58C DNA MER1_type 4 215 0 2356 145 41 9 chr18 47580878 47581295 -38407639 - LTR10A LTR ERV1 0 547 79 192 281 144 22 chr18 47581412 47581551 -38407383 + L2 LINE L2 2363 2518 -796 213 280 90 20 chr18 47583073 47583173 -38405761 + MIR3 SINE MIR 4 110 -98 * 249 277 232 0 chr18 47583158 47583270 -38405664 + MIR SINE MIR 119 256 -6 1379 191 112 25 chr18 47583733 47584047 -38404887 - MLT1D LTR MaLR -1 504 164 2355 102 0 3 chr18 47586230 47586533 -38402401 - AluSx SINE Alu -10 302 1 2060 128 10 10 chr18 47586536 47586848 -38402086 - AluSq SINE Alu 0 313 2 582 267 37 28 chr18 47586948 47587224 -38401710 - HERVH LTR ERV1 -4148 2528 1338 374 244 133 99 chr18 47587677 47587936 -38400998 + L1M4 LINE L1 2678 2952 -3194 2052 102 3 32 chr18 47587936 47588221 -38400713 + AluSc SINE Alu 1 277 -32 374 244 133 99 chr18 47588221 47588293 -38400641 + L1M4 LINE L1 2952 3020 -3126 274 274 64 34 chr18 47588327 47588548 -38400386 + MER46C DNA MER2_type 68 331 -7 13942 26 1 0 chr18 47588665 47590269 -38398665 - L1P LINE L1 -1065 5081 3477 394 340 64 40 chr18 47590401 47590698 -38398236 - L2 LINE L2 -8 3264 2961 429 36 0 0 chr18 47590749 47590804 -38398130 + (TG)n Simple_repeat Simple_repeat 1 55 0 1372 211 65 8 chr18 47593990 47594360 -38394574 - L1M4 LINE L1 -930 5216 4826 711 132 28 104 chr18 47594416 47594598 -38394336 - L1MA9 LINE L1 0 6312 6145 737 255 133 34 chr18 47594600 47595197 -38393737 - HAL1 LINE L1 -1725 782 94 306 237 44 44 chr18 47595654 47595768 -38393166 - L1M4 LINE L1 -754 5430 5317 561 269 183 27 chr18 47596351 47596913 -38392021 - L1ME4a LINE L1 -151 5970 5321 22 56 0 0 chr18 47597091 47597127 -38391807 + AT_rich Low_complexity Low_complexity 1 36 0 682 168 0 0 chr18 47597553 47597672 -38391262 + AluSg/x SINE Alu 181 299 -11 3828 175 21 61 chr18 47597672 47598813 -38390121 + L1M1 LINE L1 3179 4259 -3306 2121 119 20 0 chr18 47598813 47599106 -38389828 + AluSx SINE Alu 1 299 -13 3828 175 21 61 chr18 47599106 47599292 -38389642 + L1M1 LINE L1 4259 4451 -3114 2237 110 0 16 chr18 47600313 47600630 -38388304 - AluSx SINE Alu 0 312 1 219 36 0 0 chr18 47600808 47600836 -38388098 + (TG)n Simple_repeat Simple_repeat 1 28 0 932 102 8 0 chr18 47602000 47602128 -38386806 + AluY SINE Alu 1 129 -182 212 0 0 35 chr18 47602130 47602159 -38386775 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 225 83 0 0 chr18 47602345 47602381 -38386553 + (A)n Simple_repeat Simple_repeat 1 36 0 180 0 0 0 chr18 47602763 47602783 -38386151 + (A)n Simple_repeat Simple_repeat 1 20 0 2414 91 3 0 chr18 47602785 47603094 -38385840 + AluSx SINE Alu 1 310 -2 1444 155 71 40 chr18 47603328 47603624 -38385310 - AluJo SINE Alu -7 305 1 1183 170 5 0 chr18 47603783 47603971 -38384963 + MER5A DNA MER1_type 1 189 0 2161 125 0 19 chr18 47604154 47604467 -38384467 + AluSx SINE Alu 1 307 -5 209 379 18 12 chr18 47604595 47604764 -38384170 + L2 LINE L2 1868 2037 -1277 1889 135 45 3 chr18 47604870 47605159 -38383775 + AluJo SINE Alu 1 301 -11 207 0 0 0 chr18 47605199 47605222 -38383712 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr18 47605425 47605446 -38383488 + AT_rich Low_complexity Low_complexity 1 21 0 634 212 76 35 chr18 47605447 47605645 -38383289 + L1MC5 LINE L1 7707 7912 -49 515 213 0 0 chr18 47605739 47605833 -38383101 + MER5A DNA MER1_type 95 188 -1 236 288 75 12 chr18 47606765 47606845 -38382089 - MIR SINE MIR -96 112 28 2303 107 0 0 chr18 47606878 47607176 -38381758 + AluSx SINE Alu 1 298 -14 2238 109 0 25 chr18 47607247 47607567 -38381367 + AluSx SINE Alu 1 312 0 2278 110 0 7 chr18 47607683 47607992 -38380942 - AluSg SINE Alu -3 307 1 1391 186 77 19 chr18 47608654 47608965 -38379969 + MER58B DNA MER1_type 6 334 -7 334 290 145 43 chr18 47609110 47609317 -38379617 - MIR SINE MIR -33 229 2 1715 128 4 8 chr18 47609590 47609862 -38379072 + AluSx SINE Alu 48 312 0 799 138 4 169 chr18 47610328 47610559 -38378375 + 7SK RNA RNA 1 193 0 241 283 94 28 chr18 47610585 47610691 -38378243 + L2 LINE L2 3200 3312 -1 2455 101 8 8 chr18 47610726 47611081 -38377853 - THE1A LTR MaLR 0 355 1 2073 142 0 10 chr18 47611827 47612123 -38376811 - AluSx SINE Alu -19 293 1 1729 121 43 53 chr18 47613134 47613415 -38375519 + AluSg SINE Alu 1 278 -32 2347 99 0 0 chr18 47614198 47614492 -38374442 + AluSx SINE Alu 3 296 -16 404 341 30 15 chr18 47615268 47615403 -38373531 - MIR3 SINE MIR -26 182 46 563 258 28 39 chr18 47615572 47615750 -38373184 - MER104 DNA MER2_type -2 178 3 2421 80 0 3 chr18 47616109 47616408 -38372526 - AluSx SINE Alu -14 298 1 355 353 13 67 chr18 47616875 47617113 -38371821 + L2 LINE L2 2998 3222 -50 1573 251 66 42 chr18 47617268 47617478 -38371456 - LTR16C LTR ERVL -4 487 283 2206 88 41 7 chr18 47617478 47617773 -38371161 + AluSx SINE Alu 1 305 -7 1573 251 66 42 chr18 47617773 47618033 -38370901 - LTR16C LTR ERVL -208 283 6 1864 154 19 95 chr18 47618225 47618413 -38370521 + MLT1B LTR MaLR 1 142 -248 2021 118 4 0 chr18 47618413 47618729 -38370205 + AluSx SINE Alu 1 317 0 1864 154 19 95 chr18 47618729 47618961 -38369973 + MLT1B LTR MaLR 142 390 0 396 329 62 6 chr18 47620148 47620309 -38368625 - ERVL LTR ERVL -1065 4699 4530 2426 87 0 0 chr18 47620336 47620634 -38368300 + AluSg SINE Alu 1 298 -12 360 208 0 14 chr18 47620638 47620710 -38368224 + MER106A DNA MER1_type 3 73 -163 1989 145 3 3 chr18 47620762 47621065 -38367869 + AluSg SINE Alu 1 303 -7 440 110 0 14 chr18 47621070 47621143 -38367791 + (GGGAGA)n Simple_repeat Simple_repeat 6 77 0 295 56 0 0 chr18 47621148 47621184 -38367750 + MER106A DNA MER1_type 125 160 -76 260 136 114 80 chr18 47621235 47621309 -38367625 + MER106A DNA MER1_type 146 225 -11 2027 130 16 10 chr18 47621309 47621616 -38367318 + AluSx SINE Alu 1 309 -3 260 136 114 80 chr18 47621616 47621629 -38367305 + MER106A DNA MER1_type 225 236 0 1644 318 62 32 chr18 47621639 47622183 -38366751 - ERVL LTR ERVL -1251 4513 3925 2049 120 13 7 chr18 47622183 47622483 -38366451 - AluSg SINE Alu -8 302 1 1644 318 62 32 chr18 47622483 47622929 -38366005 - ERVL LTR ERVL -1839 3925 3494 808 132 0 0 chr18 47622944 47623065 -38365869 + FLAM_A SINE Alu 18 138 -4 225 0 0 0 chr18 47623451 47623476 -38365458 + (T)n Simple_repeat Simple_repeat 1 25 0 1991 109 16 35 chr18 47623669 47623749 -38365185 - L1PA12 LINE L1 -57 6111 6031 1870 150 7 3 chr18 47623749 47624036 -38364898 - AluJb SINE Alu -24 288 1 1991 109 16 35 chr18 47624036 47624268 -38364666 - L1PA12 LINE L1 -137 6031 5805 1068 189 40 36 chr18 47624303 47624551 -38364383 + LTR8A LTR ERV1 1 249 -478 2057 70 0 0 chr18 47624554 47624797 -38364137 - AluSq SINE Alu -70 243 1 1715 118 7 59 chr18 47624918 47625041 -38363893 + AluSq SINE Alu 13 141 -183 2489 73 0 6 chr18 47625041 47625354 -38363580 + AluY SINE Alu 1 311 0 1715 118 7 59 chr18 47625354 47625557 -38363377 + AluSq SINE Alu 141 324 0 450 235 12 0 chr18 47625557 47625642 -38363292 + Tigger2 DNA MER2_type 2633 2718 0 2232 108 3 7 chr18 47626214 47626521 -38362413 - AluSp SINE Alu -7 306 1 291 262 63 68 chr18 47626594 47626770 -38362164 + L1ME LINE L1 5543 5557 -564 2133 95 14 7 chr18 47626770 47627055 -38361879 - AluSc SINE Alu -18 291 5 291 262 63 68 chr18 47627055 47627186 -38361748 + L1ME LINE L1 5557 5687 -434 1136 151 0 32 chr18 47627408 47627594 -38361340 + AluSg/x SINE Alu 124 303 -9 23 78 0 0 chr18 47627616 47627667 -38361267 + AT_rich Low_complexity Low_complexity 1 51 0 968 231 14 18 chr18 47627831 47628052 -38360882 + MIR SINE MIR 43 262 0 32 26 0 0 chr18 47628198 47628237 -38360697 + AT_rich Low_complexity Low_complexity 1 39 0 2113 110 32 0 chr18 47628273 47628555 -38360379 - AluSc SINE Alu -18 291 1 2029 114 0 71 chr18 47628555 47628880 -38360054 - AluSx SINE Alu -10 302 1 23 33 0 0 chr18 47629069 47629099 -38359835 + AT_rich Low_complexity Low_complexity 1 30 0 2324 85 27 0 chr18 47629162 47629457 -38359477 - AluSc SINE Alu -6 303 1 2049 108 20 10 chr18 47629781 47630076 -38358858 - AluSx SINE Alu -14 298 1 2006 119 3 45 chr18 47630676 47630987 -38357947 - AluSx SINE Alu -14 298 1 336 48 0 0 chr18 47631416 47631458 -38357476 + (CA)n Simple_repeat Simple_repeat 2 43 0 2106 113 0 46 chr18 47631695 47632022 -38356912 - AluSp SINE Alu -1 312 1 273 268 189 21 chr18 47632357 47632547 -38356387 + L3 LINE CR1 581 802 -775 4475 74 2 0 chr18 47632687 47633257 -38355677 + L1PA14 LINE L1 5514 6084 -77 2252 115 0 0 chr18 47634014 47634310 -38354624 - AluSx SINE Alu -16 296 1 2329 83 10 13 chr18 47634318 47634632 -38354302 - AluSq SINE Alu 0 313 1 359 250 250 23 chr18 47634777 47634949 -38353985 - MIR SINE MIR -24 238 28 406 252 36 0 chr18 47635785 47635896 -38353038 - MIR3 SINE MIR -28 180 66 2051 111 40 0 chr18 47636268 47636565 -38352369 - AluSx SINE Alu -3 309 1 225 0 0 0 chr18 47637323 47637348 -38351586 + (A)n Simple_repeat Simple_repeat 1 25 0 222 281 0 47 chr18 47638675 47638739 -38350195 + MIR3 SINE MIR 111 171 -37 182 232 125 0 chr18 47639496 47639552 -38349382 - L2 LINE L2 -74 3239 3177 213 255 0 0 chr18 47639593 47639640 -38349294 + MIR3 SINE MIR 156 202 -6 291 203 0 58 chr18 47639651 47639720 -38349214 + L1ME4a LINE L1 5976 6040 -81 242 283 115 18 chr18 47639882 47640108 -38348826 + L1MC4a LINE L1 5152 5399 -747 296 237 54 11 chr18 47640295 47640388 -38348546 + L1MC4a LINE L1 5814 5910 -1898 2262 94 7 0 chr18 47640449 47640735 -38348199 + AluY SINE Alu 1 288 -23 37 62 0 0 chr18 47641020 47641085 -38347849 + AT_rich Low_complexity Low_complexity 1 65 0 1906 152 10 0 chr18 47641988 47642278 -38346656 - AluSx SINE Alu -19 293 1 1744 182 14 0 chr18 47642389 47642686 -38346248 + AluJb SINE Alu 1 301 -11 716 305 179 7 chr18 47642719 47643172 -38345762 - L2 LINE L2 -946 2368 1838 975 188 0 6 chr18 47643465 47643646 -38345288 + MER5A DNA MER1_type 7 186 -3 816 148 0 0 chr18 47644214 47644336 -38344598 + AluSg/x SINE Alu 175 296 -14 434 265 83 30 chr18 47644420 47644552 -38344382 - L2 LINE L2 0 3272 3134 950 199 75 0 chr18 47644570 47644756 -38344178 - MLT1E LTR MaLR -8 585 386 761 274 51 79 chr18 47644922 47645589 -38343345 - L1MEd LINE L1 -4579 1731 1047 1744 133 51 0 chr18 47645589 47645882 -38343052 - L1MA8 LINE L1 -3 6288 5981 761 274 51 79 chr18 47645882 47646357 -38342577 - L1MEd LINE L1 -5263 1047 410 1699 111 111 0 chr18 47646357 47646609 -38342325 - AluSx SINE Alu -16 296 17 761 274 51 79 chr18 47646609 47646660 -38342274 - L1MEd LINE L1 -5900 410 359 561 164 63 75 chr18 47646760 47646919 -38342015 - L1MEd LINE L1 -5961 158 2 2080 138 0 0 chr18 47647475 47647780 -38341154 + AluSx SINE Alu 1 305 -7 2299 90 3 0 chr18 47648329 47648618 -38340316 + AluSg SINE Alu 1 290 -20 253 298 117 57 chr18 47649095 47649548 -38339386 + L1MC4a LINE L1 6118 6597 -1211 1118 97 0 7 chr18 47649620 47649764 -38339170 + AluSq/x SINE Alu 1 143 -169 513 58 0 0 chr18 47649764 47649833 -38339101 + Alu SINE Alu 240 308 -2 298 188 1 70 chr18 47649840 47649919 -38339015 + L1MC4a LINE L1 6695 6760 -1048 239 79 26 0 chr18 47650227 47650265 -38338669 + (TG)n Simple_repeat Simple_repeat 1 39 0 751 251 86 0 chr18 47650498 47650661 -38338273 - MER45A DNA AcHobo -1 177 1 3485 73 2 0 chr18 47650804 47651231 -38337703 + L1PA13 LINE L1 5725 6152 -11 2059 121 7 0 chr18 47651236 47651526 -38337408 + AluSp SINE Alu 2 293 -20 30 69 0 0 chr18 47651569 47651627 -38337307 + AT_rich Low_complexity Low_complexity 1 58 0 236 100 25 0 chr18 47651793 47651833 -38337101 + (CA)n Simple_repeat Simple_repeat 2 42 0 29 0 0 0 chr18 47652002 47652031 -38336903 + AT_rich Low_complexity Low_complexity 1 29 0 545 240 41 25 chr18 47652034 47652095 -38336839 + FLAM_A SINE Alu 1 60 -242 1881 161 0 7 chr18 47652095 47652394 -38336540 - AluJb SINE Alu -15 297 1 545 240 41 25 chr18 47652394 47652453 -38336481 + FLAM_A SINE Alu 60 123 -179 22 56 0 0 chr18 47653249 47653285 -38335649 + AT_rich Low_complexity Low_complexity 1 36 0 273 119 0 0 chr18 47653639 47653681 -38335253 + (A)n Simple_repeat Simple_repeat 1 42 0 2053 113 0 0 chr18 47653736 47654010 -38334924 - AluSx SINE Alu -38 274 1 808 266 75 27 chr18 47654038 47654469 -38334465 - L1ME LINE L1 -484 5637 5196 1275 160 0 49 chr18 47654553 47654797 -38334137 + AluJo SINE Alu 5 236 -76 892 219 10 108 chr18 47654804 47654968 -38333966 - HAL1b LINE L1 -48 1300 1121 2185 98 3 3 chr18 47654968 47655300 -38333634 + AluSq SINE Alu 1 332 0 892 219 10 108 chr18 47655300 47655368 -38333566 - HAL1b LINE L1 -227 1121 1048 1929 155 3 3 chr18 47655368 47655672 -38333262 + AluJb SINE Alu 6 309 -3 892 219 10 108 chr18 47655672 47655834 -38333100 - HAL1b LINE L1 -300 1048 943 2301 92 0 0 chr18 47655834 47656126 -38332808 + AluSx SINE Alu 1 292 -20 2300 112 3 0 chr18 47657788 47658100 -38330834 + AluSp SINE Alu 1 313 0 1556 221 82 84 chr18 47658434 47659139 -38329795 - HAL1b LINE L1 -518 830 127 22 0 0 0 chr18 47659609 47659631 -38329303 + AT_rich Low_complexity Low_complexity 1 22 0 456 283 67 8 chr18 47660092 47660212 -38328722 - L2 LINE L2 -18 3254 3128 2218 131 3 3 chr18 47660427 47660764 -38328170 + AluSq SINE Alu 1 337 0 360 292 100 0 chr18 47660768 47660898 -38328036 - MER117 DNA MER1_type -49 148 6 362 309 25 43 chr18 47661001 47661163 -38327771 - MIR3 SINE MIR -31 177 19 1851 227 29 20 chr18 47661205 47661371 -38327563 + MLT1C LTR MaLR 17 180 -287 2268 116 0 0 chr18 47661371 47661672 -38327262 + AluSx SINE Alu 1 301 -11 1851 227 29 20 chr18 47661672 47661950 -38326984 + MLT1C LTR MaLR 180 465 -2 413 293 81 16 chr18 47662359 47662482 -38326452 + MIR SINE MIR 16 146 -62 826 277 66 4 chr18 47662608 47662850 -38326084 + MIR SINE MIR 4 260 -2 1974 138 17 10 chr18 47663095 47663393 -38325541 + AluSx SINE Alu 1 300 -12 189 350 86 18 chr18 47663414 47663577 -38325357 - L2 LINE L2 -236 3036 2863 220 179 32 32 chr18 47664027 47664122 -38324812 + (TTA)n Simple_repeat Simple_repeat 1 95 0 463 302 16 8 chr18 47664264 47664393 -38324541 - MIR SINE MIR -106 156 27 2347 85 19 0 chr18 47665095 47665402 -38323532 - AluSp SINE Alu 0 313 1 379 227 27 0 chr18 47665947 47666022 -38322912 - MER112 DNA MER1_type -1 259 183 867 119 8 30 chr18 47666023 47666157 -38322777 - FRAM SINE Alu -21 155 25 414 200 11 21 chr18 47666202 47666297 -38322637 - MER112 DNA MER1_type -166 94 1 1089 76 0 0 chr18 47666810 47666941 -38321993 + AluSp SINE Alu 1 131 -182 244 188 31 0 chr18 47667516 47667580 -38321354 + CT-rich Low_complexity Low_complexity 3 68 0 1157 174 68 30 chr18 47668117 47668382 -38320552 + LTR39 LTR ERV1 1 275 -508 681 213 169 0 chr18 47668492 47668652 -38320282 + LTR39 LTR ERV1 597 783 0 189 74 0 0 chr18 47669195 47669222 -38319712 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 1804 129 33 4 chr18 47669224 47669495 -38319439 - AluJo SINE Alu -33 279 1 1952 143 6 22 chr18 47671059 47671373 -38317561 + AluJo SINE Alu 1 309 -3 7695 31 0 2 chr18 47671378 47673654 -38315280 + L1PA3 LINE L1 3898 6179 0 351 176 0 82 chr18 47673659 47673744 -38315190 + L1MC4a LINE L1 4664 4741 -1405 830 179 25 37 chr18 47673752 47673914 -38315020 + FRAM SINE Alu 2 161 -15 911 223 16 0 chr18 47673916 47674109 -38314825 + L1MC4a LINE L1 4737 4932 -1214 382 286 62 31 chr18 47674372 47674533 -38314401 + MER5A DNA MER1_type 18 183 -6 28 0 0 0 chr18 47675214 47675242 -38313692 + AT_rich Low_complexity Low_complexity 1 28 0 1822 121 0 65 chr18 47675248 47675538 -38313396 + AluSg SINE Alu 1 271 -39 861 107 0 0 chr18 47675544 47675656 -38313278 + AluSp/q SINE Alu 182 293 -20 3501 205 57 31 chr18 47675721 47675919 -38313015 + L1MC4 LINE L1 7164 7355 -687 2213 196 34 34 chr18 47675919 47676424 -38312510 + MLT1D LTR MaLR 1 505 0 3501 205 57 31 chr18 47676424 47676964 -38311970 + L1MC4 LINE L1 7355 7929 -113 432 0 0 0 chr18 47676964 47677012 -38311922 + (TG)n Simple_repeat Simple_repeat 1 48 0 3501 205 57 31 chr18 47677012 47677129 -38311805 + L1MC4 LINE L1 7929 8042 0 2102 82 7 10 chr18 47677147 47677438 -38311496 + L1PA13 LINE L1 5874 6163 0 838 268 117 50 chr18 47677514 47677555 -38311379 + L1MC4a LINE L1 5270 5307 -855 2367 102 0 0 chr18 47677555 47677858 -38311076 + AluSc SINE Alu 1 303 -6 838 268 117 50 chr18 47677858 47678243 -38310691 + L1MC4a LINE L1 5307 5661 -501 1465 194 66 7 chr18 47678243 47678532 -38310402 + AluJb SINE Alu 1 306 -6 838 268 117 50 chr18 47678532 47678692 -38310242 + L1MC4a LINE L1 5661 5809 -353 2112 125 10 3 chr18 47678819 47679116 -38309818 - AluSx SINE Alu -13 299 1 2080 116 14 7 chr18 47679149 47679443 -38309491 + AluSx SINE Alu 1 296 -16 199 289 0 48 chr18 47680833 47680916 -38308018 - MIR3 SINE MIR -6 202 124 2696 117 30 12 chr18 47681584 47681849 -38307085 + L1MC2 LINE L1 5650 5928 -416 1865 127 16 114 chr18 47681849 47682234 -38306700 - MER7A DNA MER2_type 0 346 2 2696 117 30 12 chr18 47682234 47682396 -38306538 + L1MC2 LINE L1 5928 6085 -259 429 239 0 0 chr18 47682499 47682637 -38306297 + C-rich Low_complexity Low_complexity 1 138 0 286 190 0 25 chr18 47683539 47683618 -38305316 + CT-rich Low_complexity Low_complexity 2 78 0 1943 147 0 3 chr18 47684817 47685128 -38303806 + AluJo SINE Alu 1 310 0 2130 125 0 3 chr18 47685332 47685629 -38303305 - AluSx SINE Alu -16 296 1 764 147 8 4 chr18 47685894 47686032 -38302902 + L1MA5 LINE L1 5754 5887 -404 * 2822 115 1 13 chr18 47686030 47686504 -38302430 - L1M2 LINE L1 -617 5680 5210 905 225 7 5 chr18 47686496 47686700 -38302234 - L1MB3 LINE L1 -40 6143 5936 * 1660 83 0 0 chr18 47686715 47686933 -38302001 - L1MA1 LINE L1 -4 6298 6081 6149 187 134 48 chr18 47686933 47687638 -38301296 - L1MDa LINE L1 -4616 1924 1281 753 179 0 8 chr18 47687638 47687761 -38301173 + FLAM_A SINE Alu 3 124 -9 6149 187 134 48 chr18 47687761 47688716 -38300218 - L1MDa LINE L1 -5259 1281 122 2096 128 10 3 chr18 47688716 47689013 -38299921 - AluSx SINE Alu -13 299 1 2080 116 14 7 chr18 47689046 47689340 -38299594 + AluSx SINE Alu 1 296 -16 199 289 0 48 chr18 47690730 47690813 -38298121 - MIR3 SINE MIR -6 202 124 3618 137 60 8 chr18 47691481 47691746 -38297188 + L1MC2 LINE L1 5650 5900 -444 1865 127 16 114 chr18 47691746 47692131 -38296803 - MER7A DNA MER2_type 0 346 2 3618 137 60 8 chr18 47692131 47692515 -38296419 + L1MC2 LINE L1 5900 6333 -11 2058 90 8 0 chr18 47692515 47692771 -38296163 - AluSg SINE Alu -15 295 38 228 301 235 0 chr18 47692930 47693083 -38295851 + L2 LINE L2 2876 3064 -249 302 155 42 70 chr18 47693122 47693193 -38295741 + MLT1D LTR MaLR 1 69 -436 1535 153 61 11 chr18 47693209 47693470 -38295464 - AluJb SINE Alu -38 274 1 279 147 0 110 chr18 47694256 47694283 -38294651 - MER96B DNA MER1_type? -239 178 150 1753 163 0 42 chr18 47694283 47694590 -38294344 + AluJo SINE Alu 1 294 -18 279 147 0 110 chr18 47694590 47694671 -38294263 - MER96B DNA MER1_type? -267 150 82 2422 92 0 7 chr18 47694671 47694976 -38293958 + AluSx SINE Alu 1 303 -9 2216 107 0 13 chr18 47695308 47695616 -38293318 - AluSg SINE Alu -6 304 1 1583 138 0 0 chr18 47695982 47696213 -38292721 - AluSg/x SINE Alu 0 312 82 2142 116 3 7 chr18 47696213 47696506 -38292428 - AluSx SINE Alu -19 293 1 27 92 0 0 chr18 47696513 47696589 -38292345 + AT_rich Low_complexity Low_complexity 1 76 0 2205 106 3 10 chr18 47696703 47697006 -38291928 + AluSq SINE Alu 1 301 -12 24 32 0 0 chr18 47697098 47697129 -38291805 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr18 47697260 47697283 -38291651 + AT_rich Low_complexity Low_complexity 1 23 0 2255 126 0 0 chr18 47697978 47698280 -38290654 + AluSx SINE Alu 1 302 -10 994 70 0 0 chr18 47699326 47699441 -38289493 + AluSq/x SINE Alu 11 125 -187 2073 95 39 3 chr18 47699487 47699770 -38289164 - AluY SINE Alu -17 294 2 1741 177 0 7 chr18 47699970 47700258 -38288676 - AluJb SINE Alu -22 290 5 218 269 10 87 chr18 47700386 47700490 -38288444 - MIR SINE MIR -120 142 47 234 0 0 0 chr18 47700572 47700598 -38288336 + (CA)n Simple_repeat Simple_repeat 2 27 0 24 32 0 0 chr18 47700601 47700632 -38288302 + AT_rich Low_complexity Low_complexity 1 31 0 259 267 17 0 chr18 47700933 47700993 -38287941 - L2 LINE L2 -1 3271 3211 664 223 38 6 chr18 47701010 47701167 -38287767 + MLT1J LTR MaLR 350 511 0 360 152 0 0 chr18 47701199 47701265 -38287669 + T-rich Low_complexity Low_complexity 1 66 0 279 79 0 0 chr18 47701381 47701419 -38287515 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 2206 101 7 17 chr18 47701532 47701692 -38287242 - AluSx SINE Alu -17 295 138 2291 101 0 10 chr18 47701692 47702000 -38286934 - AluSg SINE Alu -5 305 1 2206 101 7 17 chr18 47702000 47702137 -38286797 - AluSx SINE Alu -174 138 1 33 56 0 14 chr18 47702241 47702293 -38286641 + AT_rich Low_complexity Low_complexity 1 53 -18 1962 137 47 0 chr18 47702293 47702571 -38286363 + AluJb SINE Alu 1 291 -21 33 56 0 14 chr18 47702571 47702590 -38286344 + AT_rich Low_complexity Low_complexity 53 71 0 2368 54 17 10 chr18 47702983 47703281 -38285653 + AluSq SINE Alu 1 300 -13 213 39 0 0 chr18 47703435 47703461 -38285473 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2201 111 0 3 chr18 47703463 47703769 -38285165 + AluSx SINE Alu 1 305 -7 1344 116 0 16 chr18 47704743 47704932 -38284002 - AluSx SINE Alu -126 186 1 33 56 0 14 chr18 47705036 47705088 -38283846 + AT_rich Low_complexity Low_complexity 1 53 -18 1962 137 47 0 chr18 47705088 47705366 -38283568 + AluJb SINE Alu 1 291 -21 33 56 0 14 chr18 47705366 47705385 -38283549 + AT_rich Low_complexity Low_complexity 53 71 0 2403 54 17 7 chr18 47705778 47706075 -38282859 + AluSq SINE Alu 1 300 -13 2563 50 0 3 chr18 47706251 47706551 -38282383 + AluY SINE Alu 1 299 -12 1062 188 80 108 chr18 47706553 47706915 -38282019 + MER57A LTR ERV1 48 399 -4 927 176 164 29 chr18 47707071 47707315 -38281619 - MER2 DNA MER2_type 0 345 69 2372 80 0 3 chr18 47707339 47707628 -38281306 - AluY SINE Alu -23 288 1 716 160 0 23 chr18 47707628 47707759 -38281175 + FLAM_C SINE Alu 14 141 -2 490 192 0 13 chr18 47707759 47707837 -38281097 - MER2 DNA MER2_type -268 77 1 284 83 0 0 chr18 47708533 47708569 -38280365 - FLAM SINE Alu -11 122 87 * 288 125 18 54 chr18 47708559 47708615 -38280319 - AluSc SINE Alu -112 187 134 713 249 79 18 chr18 47708980 47709209 -38279725 - MIR SINE MIR 0 262 20 1872 149 0 29 chr18 47709538 47709847 -38279087 - AluJo SINE Alu -9 303 4 359 100 0 0 chr18 47712074 47712124 -38276810 + MADE1 DNA Mariner 2 51 -29 244 163 0 0 chr18 47712172 47712215 -38276719 - MIR SINE MIR -81 127 85 2115 140 82 55 chr18 47713122 47713325 -38275609 + MSTC LTR MaLR 3 199 -229 2119 121 10 7 chr18 47713325 47713632 -38275302 + AluSx SINE Alu 1 308 -4 2115 140 82 55 chr18 47713632 47713843 -38275091 + MSTC LTR MaLR 199 428 0 21 36 0 0 chr18 47713876 47713904 -38275030 + AT_rich Low_complexity Low_complexity 1 28 0 239 266 32 21 chr18 47713969 47714063 -38274871 - L1ME LINE L1 -196 5925 5831 2308 95 0 7 chr18 47714148 47714452 -38274482 + AluSx SINE Alu 1 302 -10 953 266 50 6 chr18 47714456 47714776 -38274158 + L1MC4a LINE L1 5564 5897 -1911 2473 50 0 0 chr18 47714817 47715117 -38273817 - AluY SINE Alu -11 300 1 684 256 116 24 chr18 47715342 47715410 -38273524 - L1ME LINE L1 -397 5724 5664 2116 119 3 0 chr18 47715410 47715704 -38273230 + AluSx SINE Alu 1 295 -17 684 256 116 24 chr18 47715704 47716006 -38272928 - L1ME LINE L1 -457 5664 5320 647 140 0 0 chr18 47716038 47716131 -38272803 - HY4 scRNA scRNA 0 93 1 318 207 85 24 chr18 47716185 47716267 -38272667 + L2 LINE L2 3227 3313 0 1225 275 98 8 chr18 47716492 47716878 -38272056 - MLT1F1 LTR MaLR 0 567 147 2136 106 3 0 chr18 47717140 47717443 -38271491 + AluSp SINE Alu 1 304 -9 2549 186 22 84 chr18 47717443 47717491 -38271443 + MER57-int LTR ERV1 4811 4860 -2677 1579 106 5 0 chr18 47717491 47717708 -38271226 - AluSg/x SINE Alu -14 296 79 2549 186 22 84 chr18 47717708 47717981 -38270953 + MER57-int LTR ERV1 4860 5148 -2389 1332 38 0 0 chr18 47717981 47718140 -38270794 + L1PA2 LINE L1 5997 6155 0 2549 186 22 84 chr18 47718140 47718510 -38270424 + MER57-int LTR ERV1 5148 5460 -2077 476 222 130 0 chr18 47718511 47718619 -38270315 + FLAM_C SINE Alu 2 123 -20 1126 219 13 17 chr18 47718637 47718874 -38270060 + MER57-int LTR ERV1 5450 5685 -1852 739 128 121 43 chr18 47719654 47719795 -38269139 - FRAM SINE Alu -13 153 2 2341 92 0 0 chr18 47719879 47720185 -38268749 + AluSq SINE Alu 1 306 -7 197 256 146 12 chr18 47720250 47720332 -38268602 - L2 LINE L2 -5 3308 3216 2217 76 36 0 chr18 47720420 47720722 -38268212 + AluSp SINE Alu 1 313 0 180 0 0 0 chr18 47721111 47721131 -38267803 + (A)n Simple_repeat Simple_repeat 1 20 0 892 114 0 0 chr18 47721133 47721265 -38267669 + AluYb8 SINE Alu 1 132 -186 2040 114 0 24 chr18 47721379 47721676 -38267258 - AluSx SINE Alu -19 293 4 641 163 23 70 chr18 47721678 47721807 -38267127 + AluSg/x SINE Alu 65 187 -125 367 138 0 113 chr18 47721808 47721888 -38267046 + AluJ/FRAM SINE Alu 229 299 -3 929 248 60 63 chr18 47721921 47722223 -38266711 + MLT1E LTR MaLR 138 438 -155 1845 142 0 10 chr18 47722225 47722528 -38266406 - AluSx SINE Alu -12 300 1 2121 91 16 7 chr18 47722614 47722921 -38266013 + AluY SINE Alu 1 310 -1 2004 136 0 3 chr18 47722982 47723291 -38265643 + AluSg SINE Alu 1 308 -2 1642 182 0 7 chr18 47723371 47723668 -38265266 + AluJb SINE Alu 1 295 -17 1989 100 3 23 chr18 47723911 47724221 -38264713 + AluSx SINE Alu 1 304 -8 752 182 0 30 chr18 47725355 47725487 -38263447 + AluSq/x SINE Alu 2 129 -183 331 130 0 0 chr18 47725487 47725541 -38263393 + Alu SINE Alu 249 302 0 1642 153 25 0 chr18 47725567 47725842 -38263092 + AluJo SINE Alu 1 282 -30 1967 121 3 16 chr18 47725863 47726178 -38262756 + AluY SINE Alu 1 311 0 489 223 69 45 chr18 47726917 47727119 -38261815 + L1MC5 LINE L1 7723 7929 -32 2263 81 3 3 chr18 47727821 47728118 -38260816 + AluSp SINE Alu 1 297 -16 4429 163 16 39 chr18 47728533 47729471 -38259463 + LTR5 LTR ERVK 1 916 -53 243 250 0 0 chr18 47729535 47729591 -38259343 - tRNA-Lys-AAG tRNA tRNA 0 76 21 286 184 0 0 chr18 47730938 47730987 -38257947 + MER3 DNA MER1_type 42 90 -119 * 736 188 109 0 chr18 47730950 47731115 -38257819 - MER3 DNA MER1_type -6 203 21 1943 103 7 24 chr18 47732146 47732496 -38256438 + AluSp SINE Alu 1 345 0 1555 148 14 43 chr18 47732585 47732862 -38256072 + AluSx SINE Alu 7 275 -37 26 0 0 0 chr18 47732873 47732899 -38256035 + AT_rich Low_complexity Low_complexity 1 26 0 1962 129 3 3 chr18 47733127 47733436 -38255498 + AluSx SINE Alu 1 309 -3 1672 153 22 29 chr18 47733516 47733830 -38255104 + AluSx SINE Alu 1 312 0 1617 130 39 4 chr18 47733831 47734085 -38254849 + AluSx SINE Alu 28 290 -22 2103 118 0 0 chr18 47734088 47734393 -38254541 + AluSx SINE Alu 1 305 -7 348 94 0 0 chr18 47734421 47734474 -38254460 + (CA)n Simple_repeat Simple_repeat 2 54 0 2087 113 3 3 chr18 47734654 47734954 -38253980 + AluSc SINE Alu 6 305 -4 1464 102 35 9 chr18 47735653 47735879 -38253055 - AluSx SINE Alu -80 232 1 1314 136 0 32 chr18 47735881 47736102 -38252832 - AluJb SINE Alu -14 298 85 2090 124 0 0 chr18 47736154 47736452 -38252482 - AluSx SINE Alu -14 298 1 982 84 0 0 chr18 47736482 47736613 -38252321 + AluSq/x SINE Alu 1 131 -181 1838 101 39 11 chr18 47736653 47736939 -38251995 - AluY SINE Alu -16 295 2 1629 177 0 7 chr18 47737139 47737427 -38251507 - AluJb SINE Alu -22 290 5 246 289 8 83 chr18 47737555 47737676 -38251258 - MIR SINE MIR -120 142 31 234 0 0 0 chr18 47737741 47737767 -38251167 + (CA)n Simple_repeat Simple_repeat 2 27 0 24 32 0 0 chr18 47737770 47737801 -38251133 + AT_rich Low_complexity Low_complexity 1 31 0 283 267 17 0 chr18 47738102 47738162 -38250772 - L2 LINE L2 -1 3271 3211 669 223 38 6 chr18 47738179 47738336 -38250598 + MLT1J LTR MaLR 350 511 0 426 121 0 0 chr18 47738368 47738434 -38250500 + (T)n Simple_repeat Simple_repeat 1 66 0 180 0 0 0 chr18 47738460 47738480 -38250454 + (G)n Simple_repeat Simple_repeat 1 20 0 213 39 0 0 chr18 47738759 47738785 -38250149 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2079 111 0 3 chr18 47738787 47739093 -38249841 + AluSx SINE Alu 1 305 -7 293 233 130 68 chr18 47740815 47740961 -38247973 + MER5A DNA MER1_type 28 182 -7 1064 96 45 0 chr18 47741038 47741195 -38247739 + L1PA10 LINE L1 6005 6168 0 968 154 87 98 chr18 47741527 47741813 -38247121 - AluJo SINE Alu 0 312 30 2294 92 0 3 chr18 47742055 47742369 -38246565 + AluSq SINE Alu 1 313 0 776 152 38 25 chr18 47742391 47742549 -38246385 - MER65C LTR ERV1 0 461 302 785 235 6 6 chr18 47742550 47742720 -38246214 + FRAM SINE Alu 1 170 -6 1566 151 32 55 chr18 47742721 47742877 -38246057 - MER65C LTR ERV1 -157 304 157 2204 100 3 0 chr18 47742877 47743178 -38245756 + AluSx SINE Alu 1 302 -10 1566 151 32 55 chr18 47743178 47743332 -38245602 - MER65C LTR ERV1 -304 157 1 1735 112 7 72 chr18 47743369 47743696 -38245238 + AluSx SINE Alu 1 307 0 1522 173 72 14 chr18 47743701 47743979 -38244955 + AluSx SINE Alu 2 295 -7 2256 71 3 3 chr18 47743979 47744275 -38244659 + AluY SINE Alu 1 296 -15 2028 132 0 0 chr18 47744406 47744710 -38244224 - AluSx SINE Alu -8 304 1 1856 156 7 3 chr18 47744751 47745059 -38243875 + AluJo SINE Alu 1 309 -3 1668 154 3 33 chr18 47745106 47745412 -38243522 + AluSx SINE Alu 1 297 -15 1914 91 39 49 chr18 47745412 47745720 -38243214 + AluSx SINE Alu 1 305 -7 1038 132 0 47 chr18 47745828 47746018 -38242916 - AluSq SINE Alu -132 181 1 425 318 50 6 chr18 47746019 47746198 -38242736 - L2 LINE L2 -1896 1418 1232 2195 96 7 0 chr18 47746281 47746573 -38242361 + AluSx SINE Alu 1 294 -18 396 59 0 0 chr18 47748188 47748239 -38240695 + (TG)n Simple_repeat Simple_repeat 2 52 0 1967 113 11 0 chr18 47748248 47748530 -38240404 - AluSx SINE Alu -27 285 1 2493 49 3 0 chr18 47748838 47749145 -38239789 + AluY SINE Alu 1 308 -3 2039 116 7 0 chr18 47749382 47749675 -38239259 + AluSx SINE Alu 1 295 -17 198 0 0 0 chr18 47749675 47749697 -38239237 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 380 213 14 55 chr18 47749698 47749860 -38239074 - L1ME1 LINE L1 -18 6148 6003 25 51 0 0 chr18 47749884 47749923 -38239011 + AT_rich Low_complexity Low_complexity 1 39 0 767 161 7 36 chr18 47750515 47750652 -38238282 - FLAM_A SINE Alu 0 133 1 766 227 28 23 chr18 47750752 47750928 -38238006 - L1M4c LINE L1 -2001 4381 4205 611 171 98 8 chr18 47750963 47751086 -38237848 - AluSg SINE Alu -175 135 2 1626 240 20 18 chr18 47751089 47751372 -38237562 - L1M4c LINE L1 -3004 3378 3092 1466 133 184 45 chr18 47751372 47751439 -38237495 - MSTA LTR MaLR 0 428 372 2380 78 0 0 chr18 47751439 47751748 -38237186 + AluY SINE Alu 1 309 -2 1466 133 184 45 chr18 47751748 47752056 -38236878 - MSTA LTR MaLR -56 372 1 1626 240 20 18 chr18 47752056 47752260 -38236674 - L1M4c LINE L1 -3290 3092 2890 1812 164 0 7 chr18 47752260 47752570 -38236364 - AluSg SINE Alu -2 308 1 358 302 59 8 chr18 47752598 47752845 -38236089 - L1M4c LINE L1 -4548 2015 1643 578 107 24 0 chr18 47752955 47753039 -38235895 - AluS SINE Alu -224 89 4 641 163 23 70 chr18 47753041 47753170 -38235764 + AluSg/x SINE Alu 65 187 -125 397 139 0 101 chr18 47753171 47753250 -38235684 + AluJ/FRAM SINE Alu 229 299 -3 1542 216 72 76 chr18 47753283 47753587 -38235347 + MLT1E LTR MaLR 138 441 -152 2326 67 0 3 chr18 47753587 47753885 -38235049 - AluY SINE Alu -12 299 3 1542 216 72 76 chr18 47753885 47754038 -38234896 + MLT1E LTR MaLR 441 593 0 1746 147 7 20 chr18 47754039 47754339 -38234595 + AluJo SINE Alu 1 296 -16 662 147 47 6 chr18 47754339 47754509 -38234425 + GA-rich Low_complexity Low_complexity 1 177 0 356 277 9 0 chr18 47754531 47754643 -38234291 + L1ME LINE L1 1530 1642 -4754 * 733 262 25 18 chr18 47754640 47754704 -38234230 + L1ME LINE L1 5176 5238 -993 2064 112 0 29 chr18 47754704 47755018 -38233916 + AluSx SINE Alu 1 305 -7 733 262 25 18 chr18 47755018 47755307 -38233627 + L1ME LINE L1 5238 5527 -704 1653 131 41 17 chr18 47755321 47755611 -38233323 - AluY SINE Alu -14 297 1 198 0 0 0 chr18 47755611 47755633 -38233301 + (T)n Simple_repeat Simple_repeat 1 22 0 203 171 0 0 chr18 47756008 47756049 -38232885 + T-rich Low_complexity Low_complexity 1 41 0 271 116 0 0 chr18 47756149 47756192 -38232742 + Alu SINE Alu 255 297 -3 898 191 48 67 chr18 47756195 47756405 -38232529 - AluJo SINE Alu -98 214 9 653 240 8 0 chr18 47756413 47756538 -38232396 - MLT1E LTR MaLR -467 126 1 2081 101 7 0 chr18 47756638 47756926 -38232008 - AluSq SINE Alu -23 290 1 487 298 31 16 chr18 47756927 47757228 -38231706 - L1M4c LINE L1 -4910 1474 1183 2303 64 6 19 chr18 47757268 47757579 -38231355 - AluY SINE Alu -4 307 1 872 137 0 20 chr18 47757585 47757731 -38231203 - FLAM_C SINE Alu 0 143 1 2127 107 0 17 chr18 47757900 47758200 -38230734 - AluSc SINE Alu -14 295 1 1374 178 110 0 chr18 47758348 47758629 -38230305 - AluJo SINE Alu 0 312 1 527 29 14 0 chr18 47758701 47758770 -38230164 + (TCTA)n Simple_repeat Simple_repeat 2 71 0 1732 161 0 0 chr18 47758964 47759243 -38229691 + AluJb SINE Alu 1 279 -33 414 0 0 0 chr18 47759243 47759289 -38229645 + (CA)n Simple_repeat Simple_repeat 1 46 0 242 324 0 14 chr18 47759413 47759484 -38229450 - LTR38 LTR ERV1 -362 194 125 359 230 0 60 chr18 47759587 47759687 -38229247 - LTR38B LTR ERV1 -495 115 22 1462 199 3 10 chr18 47759687 47759979 -38228955 + AluJb SINE Alu 1 290 -22 2157 102 3 0 chr18 47759990 47760285 -38228649 + AluSg SINE Alu 1 296 -14 2120 89 4 4 chr18 47760296 47760576 -38228358 + AluSp SINE Alu 7 286 -27 943 112 47 35 chr18 47760586 47760756 -38228178 + L1MA3 LINE L1 6132 6303 -2 2378 161 46 5 chr18 47760772 47761188 -38227746 + MER67B LTR ERV1 143 575 -86 287 179 0 18 chr18 47761466 47761522 -38227412 + MER67B LTR ERV1 607 661 0 923 251 110 146 chr18 47761557 47762119 -38226815 - MLT1G LTR MaLR 0 590 54 39 22 0 0 chr18 47762267 47762313 -38226621 + AT_rich Low_complexity Low_complexity 1 46 0 1779 157 0 10 chr18 47762351 47762644 -38226290 - AluJb SINE Alu -20 292 3 475 237 26 9 chr18 47762768 47762882 -38226052 - L2 LINE L2 -1 3312 3197 2064 107 0 3 chr18 47763365 47763663 -38225271 + AluSx SINE Alu 16 312 0 1371 170 58 0 chr18 47763790 47764049 -38224885 - AluJb SINE Alu -2 310 37 2286 104 10 0 chr18 47764652 47764951 -38223983 + AluSg SINE Alu 1 302 -8 181 313 21 0 chr18 47764995 47765043 -38223891 + MIR SINE MIR 210 258 -4 741 203 176 78 chr18 47765044 47765340 -38223594 + MER46C DNA MER2_type 3 327 -11 199 0 0 0 chr18 47765445 47765467 -38223467 + (TTTA)n Simple_repeat Simple_repeat 2 152 0 2242 103 0 0 chr18 47765467 47765749 -38223185 - AluSg SINE Alu -28 282 1 1032 112 0 0 chr18 47765751 47765885 -38223049 - AluSg/x SINE Alu -16 296 163 1501 209 60 121 chr18 47765885 47766515 -38222419 + MLT1E1 LTR MaLR 63 654 0 248 333 9 26 chr18 47766515 47766629 -38222305 + MIR3 SINE MIR 92 203 -5 1139 100 14 7 chr18 47768324 47768533 -38220401 - AluSq SINE Alu -25 288 33 186 289 60 0 chr18 47768533 47768616 -38220318 + MIR3 SINE MIR 114 201 -7 2022 150 0 3 chr18 47769359 47769665 -38219269 - AluSx SINE Alu -7 305 1 460 69 0 0 chr18 47769665 47769723 -38219211 - AluSq SINE Alu -177 135 78 1247 148 175 12 chr18 47770439 47770696 -38218238 - AluSg SINE Alu -1 299 1 200 194 0 0 chr18 47770828 47770864 -38218070 - L3b LINE CR1 -255 1328 1293 360 282 13 45 chr18 47771327 47771483 -38217451 - LTR16C LTR ERVL -2 489 339 2553 144 48 65 chr18 47771863 47772172 -38216762 - LTR26B LTR ERV1 -19 512 214 1978 91 0 23 chr18 47772172 47772437 -38216497 + AluSx SINE Alu 1 259 -53 2553 144 48 65 chr18 47772437 47772648 -38216286 - LTR26B LTR ERV1 -317 214 1 899 179 31 6 chr18 47773451 47773613 -38215321 - FRAM SINE Alu 0 166 1 1013 158 0 0 chr18 47773682 47773828 -38215106 + AluSg/x SINE Alu 131 276 -36 46 0 0 0 chr18 47773828 47773874 -38215060 + AT_rich Low_complexity Low_complexity 1 46 0 1695 127 0 0 chr18 47774032 47774261 -38214673 + AluSx SINE Alu 1 229 -83 476 154 51 0 chr18 47774284 47774393 -38214541 + AluJb SINE Alu 204 316 0 604 212 9 0 chr18 47774835 47774948 -38213986 - AluJb SINE Alu -8 304 191 2168 84 14 11 chr18 47775070 47775356 -38213578 - AluSq SINE Alu -26 287 1 364 278 103 0 chr18 47776434 47776560 -38212374 - MIR3 SINE MIR -3 205 67 2352 85 0 3 chr18 47776834 47777127 -38211807 + AluSg SINE Alu 1 292 -18 396 59 0 0 chr18 47778750 47778801 -38210133 + (TG)n Simple_repeat Simple_repeat 2 52 0 2056 113 11 3 chr18 47778810 47779093 -38209841 - AluSx SINE Alu -27 285 1 670 49 0 0 chr18 47779402 47779484 -38209450 + AluY SINE Alu 2 83 -228 189 0 0 0 chr18 47779580 47779601 -38209333 + (A)n Simple_repeat Simple_repeat 1 21 0 2346 76 36 0 chr18 47779836 47780138 -38208796 + AluSp SINE Alu 1 313 0 933 172 6 0 chr18 47780330 47780487 -38208447 + MER5A DNA MER1_type 32 189 0 2161 125 0 19 chr18 47780670 47780983 -38207951 + AluSx SINE Alu 1 307 -5 209 379 18 12 chr18 47781111 47781280 -38207654 + L2 LINE L2 1868 2037 -1277 1889 135 45 3 chr18 47781386 47781675 -38207259 + AluJo SINE Alu 1 301 -11 207 0 0 0 chr18 47781715 47781738 -38207196 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr18 47781941 47781962 -38206972 + AT_rich Low_complexity Low_complexity 1 21 0 634 212 76 35 chr18 47781963 47782161 -38206773 + L1MC5 LINE L1 7707 7912 -49 515 213 0 0 chr18 47782255 47782349 -38206585 + MER5A DNA MER1_type 95 188 -1 236 288 75 12 chr18 47783281 47783361 -38205573 - MIR SINE MIR -96 112 28 2303 107 0 0 chr18 47783394 47783692 -38205242 + AluSx SINE Alu 1 298 -14 2142 116 0 28 chr18 47783763 47784082 -38204852 + AluSx SINE Alu 1 310 -2 2278 110 0 7 chr18 47784198 47784507 -38204427 - AluSg SINE Alu -3 307 1 1391 186 77 19 chr18 47785169 47785480 -38203454 + MER58B DNA MER1_type 6 334 -7 334 290 145 43 chr18 47785625 47785832 -38203102 - MIR SINE MIR -33 229 2 1715 128 4 8 chr18 47786105 47786377 -38202557 + AluSx SINE Alu 48 312 0 799 138 4 169 chr18 47786843 47787074 -38201860 + 7SK RNA RNA 1 193 0 241 283 94 28 chr18 47787100 47787206 -38201728 + L2 LINE L2 3200 3312 -1 2455 101 8 8 chr18 47787241 47787596 -38201338 - THE1A LTR MaLR 0 355 1 1918 132 21 0 chr18 47788342 47788629 -38200305 - AluSx SINE Alu -19 293 1 240 150 0 0 chr18 47788637 47788677 -38200257 - Alu SINE Alu -177 125 86 726 257 38 55 chr18 47788679 47788875 -38200059 - L1M4c LINE L1 -4731 2228 2039 1967 116 60 3 chr18 47788875 47789159 -38199775 - AluSc SINE Alu -9 300 1 726 257 38 55 chr18 47789159 47789308 -38199626 - L1M4c LINE L1 -4920 2039 1889 1981 141 11 0 chr18 47789329 47789613 -38199321 - AluSx SINE Alu -25 287 1 1095 103 0 0 chr18 47789613 47789749 -38199185 - AluSq/x SINE Alu -176 136 1 460 177 1 49 chr18 47789750 47789868 -38199066 - L1M4c LINE L1 -4960 1895 1787 2401 97 0 3 chr18 47789868 47790177 -38198757 - AluSg SINE Alu -2 308 1 460 177 1 49 chr18 47790177 47790223 -38198711 - L1M4c LINE L1 -5068 1787 1740 484 58 81 52 chr18 47790223 47790396 -38198538 + (TA)n Simple_repeat Simple_repeat 1 178 0 535 49 70 65 chr18 47790415 47791083 -38197851 + (TA)n Simple_repeat Simple_repeat 1 671 0 2094 129 7 0 chr18 47791083 47791369 -38197565 - AluSx SINE Alu -24 288 1 4728 245 90 37 chr18 47791370 47793020 -38195914 - L1M4c LINE L1 -5107 1748 2 668 178 46 20 chr18 47793019 47793171 -38195763 + L1MB8 LINE L1 4845 5000 -1146 * 2095 110 41 0 chr18 47793185 47793475 -38195459 + AluSx SINE Alu 1 302 -10 1171 115 0 29 chr18 47793475 47793643 -38195291 + AluJb SINE Alu 135 297 -15 761 212 16 5 chr18 47793647 47793831 -38195103 + L1MB8 LINE L1 5019 5204 -942 1986 116 47 0 chr18 47793831 47794107 -38194827 + AluSx SINE Alu 1 289 -23 268 207 52 0 chr18 47794107 47794165 -38194769 + GA-rich Low_complexity Low_complexity 1 61 0 4008 162 48 64 chr18 47794166 47794278 -38194656 + L1MB8 LINE L1 5188 5300 -878 2082 128 3 7 chr18 47794278 47794584 -38194350 + AluSx SINE Alu 3 307 -5 4008 162 48 64 chr18 47794584 47794729 -38194205 + L1MB8 LINE L1 5300 5446 -732 1314 163 171 8 chr18 47794729 47794981 -38193953 + AluJb SINE Alu 1 293 -9 4008 162 48 64 chr18 47794981 47795545 -38193389 + L1MB8 LINE L1 5446 6018 -160 652 153 119 0 chr18 47795545 47795663 -38193271 + AluJo/FLAM SINE Alu 1 132 -170 2335 98 0 10 chr18 47795663 47795969 -38192965 + AluSg SINE Alu 3 305 -5 4008 162 48 64 chr18 47795969 47796132 -38192802 + L1MB8 LINE L1 6016 6177 -1 231 208 170 0 chr18 47796751 47796804 -38192130 - MIR SINE MIR -153 109 48 2306 96 0 10 chr18 47796862 47797165 -38191769 - AluSg SINE Alu -8 302 3 219 270 152 91 chr18 47797585 47797815 -38191119 - L2 LINE L2 -110 3162 2919 2497 65 3 0 chr18 47798239 47798533 -38190401 - AluSx SINE Alu -17 295 1 2152 135 0 0 chr18 47798588 47798885 -38190049 - AluSx SINE Alu -15 297 1 254 28 0 28 chr18 47799166 47799202 -38189732 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1683 93 0 9 chr18 47799204 47799418 -38189516 - AluSq SINE Alu -28 285 74 189 0 0 0 chr18 47799481 47799502 -38189432 + (TTA)n Simple_repeat Simple_repeat 2 22 0 646 179 0 0 chr18 47799615 47799721 -38189213 - U6 snRNA snRNA -1 106 1 1033 154 41 86 chr18 47799793 47799834 -38189100 + AluJo SINE Alu 87 128 -184 2283 130 0 0 chr18 47799834 47800141 -38188793 - AluSx SINE Alu -5 307 1 1033 154 41 86 chr18 47800141 47800319 -38188615 + AluJo SINE Alu 128 296 -16 474 237 59 15 chr18 47800661 47800796 -38188138 - MIR SINE MIR -109 153 13 2546 66 3 0 chr18 47800930 47801235 -38187699 + AluY SINE Alu 1 306 -5 853 112 0 70 chr18 47801897 47802040 -38186894 - FLAM_C SINE Alu 0 133 1 2201 118 0 23 chr18 47802127 47802433 -38186501 + AluSx SINE Alu 1 299 -13 947 203 0 0 chr18 47802433 47802591 -38186343 + AluJo/FRAM SINE Alu 134 291 -21 23 0 0 0 chr18 47802591 47802614 -38186320 + AT_rich Low_complexity Low_complexity 1 23 0 2133 127 0 0 chr18 47802974 47803265 -38185669 + AluSx SINE Alu 1 291 -21 2335 92 10 3 chr18 47803265 47803568 -38185366 + AluSg SINE Alu 1 305 -5 2294 99 7 0 chr18 47803991 47804285 -38184649 + AluSx SINE Alu 1 296 -16 2142 113 0 57 chr18 47804621 47804798 -38184136 - AluSx SINE Alu -12 300 115 414 0 0 0 chr18 47804798 47804844 -38184090 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 2142 116 3 0 chr18 47804845 47805130 -38183804 - AluSx SINE Alu -26 286 1 2142 113 0 57 chr18 47805130 47805268 -38183666 - AluSx SINE Alu -196 116 1 2160 116 3 16 chr18 47805421 47805731 -38183203 + AluSg1 SINE Alu 1 306 -3 231 261 54 22 chr18 47806613 47806705 -38182229 + L1 LINE L1 4953 5047 -1099 712 208 0 0 chr18 47806731 47806856 -38182078 - FLAM_A SINE Alu -8 125 1 24 22 0 43 chr18 47806927 47806943 -38181991 + AT_rich Low_complexity Low_complexity 1 16 -28 2071 141 3 0 chr18 47806943 47807233 -38181701 - AluSx SINE Alu -21 291 1 24 22 0 43 chr18 47807233 47807262 -38181672 + AT_rich Low_complexity Low_complexity 16 44 0 300 238 86 12 chr18 47807456 47807622 -38181312 - L1M LINE L1 -776 5370 5199 730 284 36 78 chr18 47807649 47807951 -38180983 + MLT1H LTR MaLR 3 291 -258 1893 148 39 0 chr18 47807951 47808235 -38180699 + AluSx SINE Alu 1 295 -17 730 284 36 78 chr18 47808235 47808267 -38180667 + MLT1H LTR MaLR 291 323 -226 442 189 18 81 chr18 47808395 47808440 -38180494 - MLT1E3 LTR MaLR -475 149 103 2080 99 7 11 chr18 47808440 47808770 -38180164 + AluSg SINE Alu 2 330 0 442 189 18 81 chr18 47808770 47808834 -38180100 - MLT1E3 LTR MaLR -521 103 46 * 574 233 60 0 chr18 47808833 47808966 -38179968 - MLT2F LTR ERVL -517 146 6 2143 107 13 23 chr18 47809037 47809173 -38179761 + AluSq SINE Alu 1 137 -176 2025 143 0 10 chr18 47809173 47809487 -38179447 + AluSx SINE Alu 1 311 -1 2143 107 13 23 chr18 47809487 47809660 -38179274 + AluSq SINE Alu 137 307 -6 1982 124 4 0 chr18 47809664 47809938 -38178996 + AluSg SINE Alu 34 308 -2 523 183 325 0 chr18 47809997 47810123 -38178811 + AluJb SINE Alu 131 297 -15 1863 134 7 30 chr18 47810125 47810448 -38178486 + AluSx SINE Alu 3 312 0 2341 112 0 6 chr18 47810604 47810918 -38178016 + AluSq SINE Alu 1 312 -1 1758 174 3 3 chr18 47810962 47811250 -38177684 + AluJb SINE Alu 1 288 -24 274 197 40 0 chr18 47811257 47811333 -38177601 + L1M4 LINE L1 3151 3229 -2917 274 197 40 0 chr18 47811455 47811531 -38177403 + L1M4 LINE L1 3151 3229 -2917 456 214 18 9 chr18 47812004 47812116 -38176818 - L1MC4 LINE L1 -183 7859 7747 2334 109 0 0 chr18 47812133 47812435 -38176499 + AluSq SINE Alu 1 302 -11 1872 149 0 29 chr18 47813583 47813892 -38175042 + AluJo SINE Alu 4 303 -9 713 249 79 18 chr18 47814221 47814450 -38174484 + MIR SINE MIR 20 262 0 288 125 18 54 chr18 47814815 47814871 -38174063 + FRAM/FAM SINE Alu 1 53 -113 284 83 0 0 chr18 47814861 47814897 -38174037 + FLAM_A SINE Alu 86 121 -12 * 490 192 0 13 chr18 47815593 47815671 -38173263 + MER2 DNA MER2_type 1 77 -268 716 160 0 23 chr18 47815671 47815802 -38173132 - FLAM_C SINE Alu -2 141 14 2372 80 0 3 chr18 47815802 47816091 -38172843 + AluY SINE Alu 1 288 -23 927 176 164 29 chr18 47816115 47816359 -38172575 + MER2 DNA MER2_type 69 345 0 1062 188 80 108 chr18 47816515 47816877 -38172057 - MER57A LTR ERV1 -4 399 48 2205 120 3 0 chr18 47816879 47817178 -38171756 - AluSx SINE Alu -12 300 1 1070 88 0 15 chr18 47817179 47817316 -38171618 - AluSq/x SINE Alu -178 135 1 2154 107 3 26 chr18 47817469 47817778 -38171156 + AluSg1 SINE Alu 1 302 -7 231 261 54 22 chr18 47818660 47818752 -38170182 + L1 LINE L1 4953 5047 -1099 712 208 0 0 chr18 47818778 47818903 -38170031 - FLAM_A SINE Alu -8 125 1 24 22 0 43 chr18 47818974 47818990 -38169944 + AT_rich Low_complexity Low_complexity 1 16 -28 2071 141 3 0 chr18 47818990 47819280 -38169654 - AluSx SINE Alu -21 291 1 24 22 0 43 chr18 47819280 47819309 -38169625 + AT_rich Low_complexity Low_complexity 16 44 0 300 238 86 12 chr18 47819502 47819668 -38169266 - L1M LINE L1 -776 5370 5199 883 282 52 26 chr18 47820084 47820215 -38168719 - L1ME3A LINE L1 -4 6166 6040 2414 86 10 0 chr18 47820215 47820518 -38168416 - AluSx SINE Alu -6 306 1 883 282 52 26 chr18 47820518 47820734 -38168200 - L1ME3A LINE L1 -130 6040 5810 804 236 5 26 chr18 47820763 47820958 -38167976 + MER20 DNA MER1_type 12 202 -17 1036 237 69 15 chr18 47820980 47821254 -38167680 - L1ME3A LINE L1 -387 5775 5487 2077 113 42 3 chr18 47821272 47821556 -38167378 + AluSx SINE Alu 1 295 -17 241 205 134 89 chr18 47821941 47822053 -38166881 + MER5A DNA MER1_type 66 182 -7 1066 96 45 0 chr18 47822130 47822287 -38166647 + L1PA10 LINE L1 6005 6168 0 1062 154 87 98 chr18 47822620 47822906 -38166028 - AluJo SINE Alu 0 312 30 2387 92 0 6 chr18 47823148 47823463 -38165471 + AluSq SINE Alu 1 313 0 774 151 43 0 chr18 47823486 47823625 -38165309 - MER65C LTR ERV1 0 461 317 781 235 6 11 chr18 47823636 47823815 -38165119 + FRAM SINE Alu 1 170 -6 1573 151 32 55 chr18 47823816 47823972 -38164962 - MER65C LTR ERV1 -157 304 157 2329 100 3 0 chr18 47823972 47824273 -38164661 + AluSx SINE Alu 1 302 -10 1573 151 32 55 chr18 47824273 47824427 -38164507 - MER65C LTR ERV1 -304 157 1 1857 112 7 72 chr18 47824464 47824791 -38164143 + AluSx SINE Alu 1 307 0 1504 173 72 14 chr18 47824795 47825073 -38163861 + AluSx SINE Alu 1 294 -18 2160 122 3 3 chr18 47825074 47825368 -38163566 + AluSx SINE Alu 1 294 -18 636 230 133 70 chr18 47825369 47825700 -38163234 - L1P5 LINE L1 -485 5636 5293 648 140 0 0 chr18 47825702 47825795 -38163139 - HY4 scRNA scRNA 0 93 1 281 206 27 27 chr18 47825858 47825931 -38163003 + L2 LINE L2 3241 3313 0 1208 275 98 8 chr18 47826156 47826542 -38162392 - MLT1F1 LTR MaLR 0 567 147 2261 103 3 0 chr18 47826804 47827104 -38161830 + AluSp SINE Alu 1 301 -12 2620 184 22 84 chr18 47827106 47827155 -38161779 + MER57-int LTR ERV1 4810 4860 -2677 1666 106 5 0 chr18 47827155 47827372 -38161562 - AluSg/x SINE Alu -14 296 79 2620 184 22 84 chr18 47827372 47827645 -38161289 + MER57-int LTR ERV1 4860 5148 -2389 1334 38 0 0 chr18 47827645 47827804 -38161130 + L1PA2 LINE L1 5997 6155 0 2620 184 22 84 chr18 47827804 47828174 -38160760 + MER57-int LTR ERV1 5148 5460 -2077 470 222 130 0 chr18 47828175 47828283 -38160651 + FLAM_C SINE Alu 2 123 -20 1128 219 13 17 chr18 47828301 47828538 -38160396 + MER57-int LTR ERV1 5450 5685 -1852 731 128 121 43 chr18 47829319 47829460 -38159474 - FRAM SINE Alu -13 153 2 2468 92 0 0 chr18 47829544 47829849 -38159085 + AluSq SINE Alu 1 305 -8 3605 106 15 4 chr18 47829993 47830514 -38158420 - MER41B LTR ERV1 -108 527 1 2430 72 0 10 chr18 47830887 47831202 -38157732 - AluY SINE Alu 0 311 3 216 233 88 107 chr18 47831687 47831776 -38157158 + MIR SINE MIR 9 95 -167 258 32 0 0 chr18 47831776 47831807 -38157127 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 216 233 88 107 chr18 47831807 47831876 -38157058 + MIR SINE MIR 95 164 -98 238 216 45 80 chr18 47832363 47832451 -38156483 + MIR SINE MIR 56 140 -122 1883 134 3 14 chr18 47832942 47833234 -38155700 - AluSq SINE Alu -17 296 8 315 159 43 14 chr18 47833510 47833579 -38155355 + MLT1J LTR MaLR 418 488 -23 873 211 61 45 chr18 47833589 47833835 -38155099 - MLT1J LTR MaLR 0 511 262 262 200 96 88 chr18 47833854 47833979 -38154955 - MLT1J LTR MaLR -383 128 3 291 262 107 10 chr18 47834264 47834367 -38154567 - L1ME3A LINE L1 -4 6166 6054 189 0 0 0 chr18 47834396 47834417 -38154517 + (T)n Simple_repeat Simple_repeat 1 21 0 2339 101 0 0 chr18 47884431 47884737 -38104197 - AluSg SINE Alu -4 306 1 2142 113 0 0 chr18 47885117 47885434 -38103500 - AluSx SINE Alu 0 317 1 816 174 102 0 chr18 47885861 47886028 -38102906 + MER6B DNA MER2_type 24 207 -3 2016 141 0 0 chr18 47886474 47886781 -38102153 + AluJb SINE Alu 1 307 0 24 0 0 0 chr18 47887117 47887141 -38101793 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr18 47890815 47890844 -38098090 + AT_rich Low_complexity Low_complexity 1 29 0 2375 70 3 7 chr18 47890907 47891206 -38097728 - AluSc SINE Alu -11 298 1 21 0 0 0 chr18 47891896 47891917 -38097017 + AT_rich Low_complexity Low_complexity 1 21 0 1849 166 0 10 chr18 47892291 47892598 -38096336 + AluJb SINE Alu 1 304 -8 342 201 128 39 chr18 47892664 47892706 -38096228 - L1ME3A LINE L1 -2331 5477 5440 2198 80 13 46 chr18 47892706 47893008 -38095926 + AluSx SINE Alu 6 297 -15 342 201 128 39 chr18 47893008 47893144 -38095790 - L1ME3A LINE L1 -2368 5440 5283 565 254 29 23 chr18 47893472 47893645 -38095289 + MER5B DNA MER1_type 4 177 -1 1456 158 12 4 chr18 47894138 47894391 -38094543 - L1MC1 LINE L1 0 6333 6079 543 245 224 17 chr18 47895142 47895383 -38093551 - L2 LINE L2 0 3313 3023 227 170 170 89 chr18 47895553 47895688 -38093246 + MER103 DNA DNA 6 151 -15 346 241 234 14 chr18 47895947 47896092 -38092842 + MER5B DNA MER1_type 2 178 0 2239 82 0 10 chr18 47896905 47897197 -38091737 - AluSg SINE Alu -21 289 1 2376 89 0 3 chr18 47898244 47898546 -38090388 - AluSq SINE Alu -12 301 1 2312 119 0 0 chr18 47899033 47899335 -38089599 - AluSp SINE Alu -11 302 1 1306 217 72 0 chr18 47900026 47900303 -38088631 - AluJb SINE Alu -5 297 1 2149 55 12 0 chr18 47900797 47901051 -38087883 - AluY SINE Alu -24 287 31 1740 161 46 7 chr18 47901056 47901341 -38087593 - AluJo SINE Alu -16 296 1 2108 92 14 7 chr18 47901352 47901662 -38087272 - AluSx SINE Alu 0 312 1 207 0 0 0 chr18 47903004 47903027 -38085907 + (T)n Simple_repeat Simple_repeat 1 23 0 2173 92 0 3 chr18 47903179 47903462 -38085472 - AluSq SINE Alu 0 313 32 21 0 0 0 chr18 47903800 47903821 -38085113 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr18 47905211 47905243 -38083691 + AT_rich Low_complexity Low_complexity 1 32 0 282 57 0 0 chr18 47905579 47905614 -38083320 - U2 snRNA snRNA -153 35 1 2201 110 3 3 chr18 47905634 47905935 -38082999 - AluSx SINE Alu -11 301 1 194 214 24 0 chr18 47907151 47907193 -38081741 + MIR SINE MIR 105 147 -61 24 32 0 0 chr18 47907582 47907613 -38081321 + AT_rich Low_complexity Low_complexity 1 31 0 890 122 0 30 chr18 47907619 47907750 -38081184 - FLAM_C SINE Alu -16 127 1 2260 122 3 6 chr18 47908268 47908600 -38080334 - AluSx SINE Alu 0 312 1 2240 97 0 3 chr18 47908943 47909231 -38079703 - AluSx SINE Alu -25 287 1 409 288 0 0 chr18 47910039 47910119 -38078815 - L2 LINE L2 -25 3247 3168 368 336 154 54 chr18 47910335 47910624 -38078310 - L2 LINE L2 -459 2855 2508 225 0 0 0 chr18 47910624 47910649 -38078285 + (TG)n Simple_repeat Simple_repeat 2 26 0 368 336 154 54 chr18 47910649 47910787 -38078147 - L2 LINE L2 -806 2508 2385 752 191 0 0 chr18 47911159 47911285 -38077649 + AluJb SINE Alu 141 266 -46 182 280 202 43 chr18 47911535 47911609 -38077325 - L2 LINE L2 -1924 1390 1329 2446 62 0 10 chr18 47911609 47911914 -38077020 + AluY SINE Alu 1 302 -9 182 280 202 43 chr18 47911914 47912096 -38076838 - L2 LINE L2 -1985 1329 1093 2155 92 0 11 chr18 47912258 47912567 -38076367 + AluSc SINE Alu 1 306 0 287 296 219 24 chr18 47912671 47912918 -38076016 + L2 LINE L2 133 427 -2887 1768 161 4 4 chr18 47913172 47913452 -38075482 + AluSx SINE Alu 5 284 -28 21 36 0 0 chr18 47913549 47913577 -38075357 + AT_rich Low_complexity Low_complexity 1 28 0 2263 101 7 0 chr18 47914182 47914480 -38074454 - AluSp SINE Alu -13 300 1 21 0 0 0 chr18 47915471 47915492 -38073442 + AT_rich Low_complexity Low_complexity 1 21 0 2179 118 0 16 chr18 47915540 47915855 -38073079 - AluSg SINE Alu 0 310 1 1640 174 13 7 chr18 47915909 47916208 -38072726 + AluSx SINE Alu 1 301 -11 2144 127 13 0 chr18 47916240 47916539 -38072395 + AluSx SINE Alu 1 303 -9 251 347 65 24 chr18 47916967 47917137 -38071797 + MER5B DNA MER1_type 1 177 -1 391 253 92 35 chr18 47917248 47917422 -38071512 - MIR SINE MIR -10 252 69 614 234 143 33 chr18 47918194 47918504 -38070430 + L1ME3A LINE L1 5645 5968 -153 389 175 25 25 chr18 47918761 47918841 -38070093 - MER116 DNA Mariner 0 80 1 2140 94 29 0 chr18 47919032 47919333 -38069601 + AluSq SINE Alu 1 309 0 1679 126 60 80 chr18 47919397 47919699 -38069235 - AluSx SINE Alu -14 298 3 22 0 0 0 chr18 47922422 47922444 -38066490 + AT_rich Low_complexity Low_complexity 1 22 0 2092 134 3 3 chr18 47923453 47923751 -38065183 + AluSx SINE Alu 1 298 -14 23 0 0 0 chr18 47923935 47923958 -38064976 + GC_rich Low_complexity Low_complexity 1 23 0 871 91 0 0 chr18 47923969 47924079 -38064855 - AluSq/x SINE Alu -179 133 24 1354 220 161 68 chr18 47924079 47924538 -38064396 + MLT2F LTR ERVL 59 560 -103 240 111 0 0 chr18 47924541 47924577 -38064357 + (TG)n Simple_repeat Simple_repeat 1 36 0 2410 104 0 0 chr18 47924771 47925080 -38063854 - AluSg SINE Alu -1 309 1 1883 161 3 22 chr18 47925442 47925759 -38063175 - AluJo SINE Alu -1 311 1 349 268 95 62 chr18 47925996 47926239 -38062695 - L1MEd LINE L1 -5564 555 305 2367 109 0 0 chr18 47926240 47926552 -38062382 - AluSx SINE Alu 0 312 1 1961 109 0 7 chr18 47927020 47927294 -38061640 + AluSx SINE Alu 41 312 0 1326 258 41 54 chr18 47927400 47927862 -38061072 + L1ME3A LINE L1 5442 5897 -273 619 205 127 15 chr18 47927866 47928071 -38060863 + L1ME3A LINE L1 5934 6161 -9 1860 133 48 0 chr18 47928083 47928353 -38060581 - AluSx SINE Alu -21 291 9 1616 117 139 4 chr18 47929368 47929683 -38059251 - AluSx SINE Alu 0 351 1 1638 175 0 38 chr18 47930189 47930503 -38058431 - AluJb SINE Alu -8 304 3 1623 183 46 0 chr18 47930568 47930853 -38058081 - AluJb SINE Alu -6 306 9 391 202 11 0 chr18 47931152 47931241 -38057693 - L1MA4 LINE L1 -217 6083 5994 1961 175 3 0 chr18 47931248 47931551 -38057383 - AluJb SINE Alu -8 304 1 441 223 54 31 chr18 47931551 47931681 -38057253 + L2 LINE L2 674 806 -2508 352 274 62 0 chr18 47931683 47931796 -38057138 - MER5C DNA MER1_type 0 324 205 2261 114 0 0 chr18 47931864 47932162 -38056772 - AluSg SINE Alu -12 298 1 1543 282 139 7 chr18 47932226 47932793 -38056141 + L2 LINE L2 805 1446 -1868 189 0 0 0 chr18 47932939 47932960 -38055974 + (T)n Simple_repeat Simple_repeat 1 21 0 1972 145 10 3 chr18 47933279 47933575 -38055359 + AluSx SINE Alu 1 298 -14 27 0 0 0 chr18 47933575 47933602 -38055332 + AT_rich Low_complexity Low_complexity 1 27 0 2330 93 0 0 chr18 47933609 47933899 -38055035 + AluSc SINE Alu 3 292 -17 21 0 0 0 chr18 47933958 47933979 -38054955 + AT_rich Low_complexity Low_complexity 1 21 0 2141 125 0 3 chr18 47934091 47934394 -38054540 - AluSx SINE Alu -10 302 1 1769 180 0 3 chr18 47935352 47935659 -38053275 - AluJb SINE Alu 0 306 1 2330 82 0 10 chr18 47935677 47935810 -38053124 + AluSg SINE Alu 1 134 -176 2149 121 0 3 chr18 47935810 47936108 -38052826 + AluSg SINE Alu 2 298 -12 2330 82 0 10 chr18 47936108 47936266 -38052668 + AluSg SINE Alu 134 289 -21 641 205 177 105 chr18 47936570 47937028 -38051906 + L1MC5 LINE L1 7185 7675 -286 180 0 0 0 chr18 47937394 47937414 -38051520 + (A)n Simple_repeat Simple_repeat 1 20 0 2367 102 3 0 chr18 47937563 47937866 -38051068 - AluSc SINE Alu -5 304 1 2372 95 0 0 chr18 47938689 47938993 -38049941 - AluSg SINE Alu -6 304 1 850 321 87 52 chr18 47939186 47939729 -38049205 - L2 LINE L2 -602 2712 2129 2089 136 0 3 chr18 47939729 47940031 -38048903 + AluJb SINE Alu 1 301 -11 850 321 87 52 chr18 47940031 47940301 -38048633 - L2 LINE L2 -1185 2129 1870 1098 218 4 0 chr18 47940301 47940526 -38048408 - AluJb SINE Alu -3 309 84 180 0 0 0 chr18 47942212 47942232 -38046702 + (A)n Simple_repeat Simple_repeat 1 20 0 809 141 0 42 chr18 47942312 47942454 -38046480 - AluJo SINE Alu -176 136 1 746 159 0 0 chr18 47943009 47943122 -38045812 + FLAM_C SINE Alu 2 114 -19 216 0 0 0 chr18 47943122 47943146 -38045788 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 2524 61 0 3 chr18 47943185 47943482 -38045452 - AluY SINE Alu -14 297 2 2084 128 0 4 chr18 47943656 47943937 -38044997 - AluSg SINE Alu -30 280 1 192 225 0 0 chr18 47944109 47944149 -38044785 - MIR3 SINE MIR -18 190 151 2307 98 13 0 chr18 47944185 47944492 -38044442 - AluSp SINE Alu -2 311 1 2474 67 3 0 chr18 47944992 47945291 -38043643 + AluSp SINE Alu 1 300 -13 2081 121 3 3 chr18 47945674 47945964 -38042970 + AluSx SINE Alu 1 290 -22 1259 109 6 27 chr18 47946102 47946285 -38042649 - AluSg SINE Alu -131 179 1 2573 157 57 4 chr18 47946493 47946965 -38041969 + L1MC1 LINE L1 5719 6215 -118 235 135 0 96 chr18 47946951 47947003 -38041931 + L1MD3 LINE L1 6082 6128 -1867 * 286 82 143 0 chr18 47947046 47947095 -38041839 + L1MC2 LINE L1 6115 6170 -174 612 127 104 97 chr18 47947096 47947230 -38041704 + AluJo SINE Alu 2 136 -176 857 119 157 0 chr18 47947241 47947400 -38041534 + L1MC2 LINE L1 6156 6339 -5 477 267 29 63 chr18 47947430 47947636 -38041298 + MLT1K LTR MaLR 333 531 -57 1708 84 114 51 chr18 47948066 47948339 -38040595 - AluSg1 SINE Alu -19 290 1 1355 204 86 4 chr18 47948693 47948972 -38039962 - AluJo SINE Alu -10 302 1 610 226 9 9 chr18 47948988 47949103 -38039831 + FLAM_A SINE Alu 2 116 -17 26 30 0 0 chr18 47949103 47949136 -38039798 + AT_rich Low_complexity Low_complexity 1 33 0 225 0 0 0 chr18 47949338 47949363 -38039571 + (T)n Simple_repeat Simple_repeat 1 25 0 23 0 0 0 chr18 47949382 47949405 -38039529 + GC_rich Low_complexity Low_complexity 1 23 0 1622 89 0 0 chr18 47949940 47950142 -38038792 - AluSg SINE Alu -106 204 3 1718 147 3 33 chr18 47950801 47950971 -38037963 - AluJo SINE Alu -15 297 138 2146 92 34 7 chr18 47950971 47951266 -38037668 - AluSp SINE Alu -10 303 1 1718 147 3 33 chr18 47951266 47951401 -38037533 - AluJo SINE Alu -174 138 1 1415 152 18 143 chr18 47951624 47951770 -38037164 + AluJb SINE Alu 1 85 -217 2149 111 23 7 chr18 47951770 47952077 -38036857 - AluSx SINE Alu 0 312 1 1415 152 18 143 chr18 47952077 47952259 -38036675 + AluJb SINE Alu 85 288 -14 378 278 9 17 chr18 47952280 47952395 -38036539 - L2 LINE L2 -1 3312 3199 2144 128 10 0 chr18 47952654 47952960 -38035974 - AluSx SINE Alu -3 309 1 1366 167 33 4 chr18 47952989 47953229 -38035705 + AluJo SINE Alu 1 247 -65 2509 65 0 13 chr18 47953350 47953657 -38035277 - AluY SINE Alu -8 303 1 2143 119 3 0 chr18 47953708 47954003 -38034931 - AluSp SINE Alu -17 296 1 934 110 0 0 chr18 47954028 47954155 -38034779 + AluSg/x SINE Alu 178 304 -6 2320 86 3 0 chr18 47954198 47954490 -38034444 - AluSx SINE Alu -19 293 1 2214 90 0 4 chr18 47955062 47955340 -38033594 - AluSq SINE Alu -25 288 12 938 139 0 14 chr18 47955351 47955495 -38033439 - AluJo SINE Alu -169 143 2 586 129 0 0 chr18 47955581 47955666 -38033268 + AluJ/FLAM SINE Alu 2 86 -226 2224 104 7 7 chr18 47955780 47956087 -38032847 + AluSx SINE Alu 1 307 -5 2035 151 3 0 chr18 47956191 47956482 -38032452 - AluSx SINE Alu -20 292 1 22 0 0 0 chr18 47956539 47956561 -38032373 + AT_rich Low_complexity Low_complexity 1 22 0 2573 62 3 0 chr18 47956580 47956886 -38032048 - AluSp SINE Alu -6 307 1 2356 68 0 0 chr18 47956887 47957167 -38031767 - AluY SINE Alu -31 280 1 1596 221 87 68 chr18 47957214 47957756 -38031178 - MLT1F1 LTR MaLR 0 567 16 227 295 71 122 chr18 47957795 47957856 -38031078 - MLT1F1-int LTR MaLR -24 1347 1284 2068 109 46 0 chr18 47957856 47958140 -38030794 - AluSq SINE Alu -16 297 1 227 295 71 122 chr18 47958140 47958414 -38030520 - MLT1F1-int LTR MaLR -87 1284 1029 448 252 97 0 chr18 47958470 47958625 -38030309 - L1MEd LINE L1 -5042 1077 908 1903 131 3 30 chr18 47958626 47958923 -38030011 + AluSx SINE Alu 1 289 -23 1648 144 114 4 chr18 47959058 47959329 -38029605 + AluSx SINE Alu 1 301 -11 2177 116 3 0 chr18 47959440 47959732 -38029202 - AluSp SINE Alu -20 293 1 2128 130 0 3 chr18 47959735 47960036 -38028898 - AluSx SINE Alu -6 306 7 1053 202 210 0 chr18 47960147 47960395 -38028539 - AluJo SINE Alu -2 300 1 2230 91 14 3 chr18 47960462 47960759 -38028175 + AluSq SINE Alu 1 300 -13 195 42 0 0 chr18 47961706 47961730 -38027204 + (A)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr18 47961740 47961763 -38027171 + AT_rich Low_complexity Low_complexity 1 23 0 2290 103 3 0 chr18 47961999 47962291 -38026643 - AluSg SINE Alu -17 293 1 265 163 0 0 chr18 47962647 47962690 -38026244 + MLT2F LTR ERVL 32 74 -589 1121 150 0 6 chr18 47962710 47962890 -38026044 - AluSg/x SINE Alu -13 297 119 457 322 72 30 chr18 47964664 47965068 -38023866 - L1ME4a LINE L1 -191 5930 5510 701 280 56 5 chr18 47965181 47965395 -38023539 + MIR SINE MIR 21 245 -17 282 250 18 80 chr18 47965727 47965839 -38023095 + MIR SINE MIR 88 192 -70 195 100 0 0 chr18 47965857 47965887 -38023047 + (A)n Simple_repeat Simple_repeat 1 30 0 322 245 133 20 chr18 47965947 47966045 -38022889 - MIR SINE MIR -61 147 39 2350 104 0 0 chr18 47967063 47967370 -38021564 + AluSx SINE Alu 1 307 -5 259 189 14 14 chr18 47967376 47967450 -38021484 + GA-rich Low_complexity Low_complexity 1 74 0 1613 232 70 36 chr18 47967921 47968478 -38020456 + L1MC5 LINE L1 7018 7593 -368 1109 155 155 0 chr18 47968484 47968703 -38020231 + AluJb SINE Alu 1 253 -59 823 206 78 62 chr18 47968717 47968826 -38020108 + L1MC5 LINE L1 7605 7711 -250 1192 229 87 22 chr18 47968826 47969149 -38019785 - MER2 DNA MER2_type 0 344 1 823 206 78 62 chr18 47969149 47969359 -38019575 + L1MC5 LINE L1 7711 7929 -32 2019 133 0 0 chr18 47969368 47969662 -38019272 + AluSx SINE Alu 1 294 -18 2031 93 7 14 chr18 47969730 47970019 -38018915 - AluSc SINE Alu -10 299 13 1442 203 14 56 chr18 47971897 47972252 -38016682 + MER58B DNA MER1_type 2 341 0 435 68 0 0 chr18 47972861 47972920 -38016014 + (TTTTC)n Simple_repeat Simple_repeat 2 60 0 2335 90 3 0 chr18 47973020 47973356 -38015578 - AluSp SINE Alu 0 337 1 23 0 0 0 chr18 47974017 47974040 -38014894 + AT_rich Low_complexity Low_complexity 1 23 0 2150 94 3 3 chr18 47975535 47975832 -38013102 - AluSx SINE Alu -15 297 1 22 0 0 0 chr18 47976140 47976162 -38012772 + AT_rich Low_complexity Low_complexity 1 22 0 239 244 107 84 chr18 47976772 47976837 -38012097 - L1ME3A LINE L1 -72 6098 6036 2280 93 0 3 chr18 47976837 47977148 -38011786 - AluSg SINE Alu 0 310 1 239 244 107 84 chr18 47977148 47977213 -38011721 - L1ME3A LINE L1 -134 6036 5965 1188 171 58 4 chr18 47977214 47977380 -38011554 - AluJb SINE Alu -10 302 118 369 0 0 0 chr18 47977380 47977421 -38011513 + (TG)n Simple_repeat Simple_repeat 2 42 0 1188 171 58 4 chr18 47977421 47977494 -38011440 - AluJb SINE Alu -194 118 50 762 134 0 0 chr18 47977511 47977623 -38011311 - AluJb SINE Alu -195 117 6 267 279 0 23 chr18 47978059 47978145 -38010789 + LTR67 LTR ERVL 456 539 -18 214 268 0 73 chr18 47978211 47978293 -38010641 - L3 LINE CR1 -382 1195 1120 255 347 87 0 chr18 47978419 47978569 -38010365 + MIR3 SINE MIR 37 199 -9 590 258 63 42 chr18 47978869 47979059 -38009875 + MIR SINE MIR 21 214 -48 22 35 0 0 chr18 47981248 47981277 -38007657 + AT_rich Low_complexity Low_complexity 1 29 0 189 0 67 89 chr18 47982033 47982078 -38006856 + (TTTTTG)n Simple_repeat Simple_repeat 4 47 0 303 202 21 96 chr18 47982173 47982267 -38006667 - L2 LINE L2 -5 3267 3181 252 122 0 0 chr18 47982316 47982357 -38006577 + (TTC)n Simple_repeat Simple_repeat 2 42 0 24 0 0 0 chr18 47982502 47982526 -38006408 + AT_rich Low_complexity Low_complexity 1 24 0 2298 90 0 6 chr18 47985402 47985714 -38003220 + AluSq SINE Alu 1 310 -3 22 0 0 0 chr18 47986628 47986650 -38002284 + AT_rich Low_complexity Low_complexity 1 22 0 181 250 104 0 chr18 47986932 47986980 -38001954 + MIR SINE MIR 94 146 -62 216 167 30 61 chr18 47987235 47987301 -38001633 - MIR SINE MIR -95 167 104 1850 217 125 18 chr18 47987837 47988690 -38000244 + L1MC4 LINE L1 5087 5401 -745 * 1919 181 54 3 chr18 47988339 47988725 -38000209 + L1MB7 LINE L1 5694 6099 -85 2239 194 108 4 chr18 47988727 47989217 -37999717 + MER44D DNA MER2_type 1 596 -9 530 126 0 0 chr18 47989222 47989309 -37999625 + L1MB7 LINE L1 6097 6183 -1 440 239 34 0 chr18 47990469 47990557 -37998377 + MIR SINE MIR 103 193 -69 333 296 39 55 chr18 47990786 47990951 -37997983 + MIR SINE MIR 38 198 -58 528 223 113 79 chr18 47990968 47991197 -37997737 - MER102b DNA MER1_type -6 335 99 258 300 0 0 chr18 47991597 47991667 -37997267 - MER102b DNA MER1_type -271 70 1 187 289 0 0 chr18 47991696 47991741 -37997193 - L2 LINE L2 -22 3250 3206 270 311 28 79 chr18 47992307 47992561 -37996373 - L2 LINE L2 -615 2699 2459 1342 282 87 34 chr18 47992639 47992690 -37996244 + HERVL LTR ERVL 2896 2943 -2711 2257 138 3 12 chr18 47992690 47993030 -37995904 - MER1B DNA MER1_type 0 337 1 1342 282 87 34 chr18 47993030 47993566 -37995368 + HERVL LTR ERVL 2943 3514 -2140 320 255 11 21 chr18 47993697 47993791 -37995143 + HERVL LTR ERVL 3683 3775 -1879 328 285 44 0 chr18 47994321 47994458 -37994476 + HERVL LTR ERVL 3861 4003 -1761 465 261 274 4 chr18 47994500 47994741 -37994193 + HERVL LTR ERVL 4035 4340 -1314 234 0 0 0 chr18 47995020 47995046 -37993888 + (TA)n Simple_repeat Simple_repeat 2 27 0 331 268 16 10 chr18 47995110 47995217 -37993717 + HERVL LTR ERVL 4700 4808 -682 1116 285 50 50 chr18 47995741 47996165 -37992769 + LTR16C LTR ERVL 68 491 0 185 302 250 17 chr18 47996166 47996338 -37992596 - L2 LINE L2 -939 2375 2164 1294 181 0 0 chr18 47996353 47996569 -37992365 + MER20 DNA MER1_type 1 216 -3 294 245 94 62 chr18 47996738 47996930 -37992004 - L2 LINE L2 -1504 1810 1613 210 257 228 10 chr18 47998016 47998117 -37990817 + MIR SINE MIR 23 145 -63 1498 175 10 27 chr18 47998189 47998481 -37990453 - AluJb SINE Alu -25 287 1 36 53 0 0 chr18 47998797 47998854 -37990080 + AT_rich Low_complexity Low_complexity 1 57 0 406 247 55 48 chr18 47999365 47999511 -37989423 + MIR SINE MIR 99 245 -17 789 209 37 27 chr18 47999753 47999940 -37988994 + MER5A DNA MER1_type 1 189 0 537 265 86 13 chr18 47999960 48000111 -37988823 + MER5B DNA MER1_type 16 177 -1 205 270 11 90 chr18 48000113 48000202 -37988732 - L2 LINE L2 -200 3072 2991 465 225 0 0 chr18 48000304 48000393 -37988541 + FRAM SINE Alu 71 159 -17 434 222 50 0 chr18 48000396 48000495 -37988439 + MIR SINE MIR 28 131 -131 203 358 0 0 chr18 48001132 48001199 -37987735 + L2 LINE L2 2875 2941 -373 346 300 66 27 chr18 48001935 48002085 -37986849 + MIR SINE MIR 8 155 -65 186 333 0 16 chr18 48002172 48002235 -37986699 + MIR SINE MIR 201 262 0 305 285 192 13 chr18 48002394 48002545 -37986389 + L3 LINE CR1 185 362 -1215 1797 161 16 10 chr18 48002591 48002779 -37986155 - AluJb SINE Alu 0 312 120 204 40 0 0 chr18 48002779 48002804 -37986130 + (TG)n Simple_repeat Simple_repeat 2 26 0 1797 161 16 10 chr18 48002804 48002925 -37986009 - AluJb SINE Alu -192 120 1 211 340 20 30 chr18 48002993 48003093 -37985841 + L3 LINE CR1 443 541 -1036 278 260 42 10 chr18 48003262 48003358 -37985576 - L1ME4a LINE L1 -2 6119 6021 324 360 106 14 chr18 48003407 48003690 -37985244 + L3 LINE CR1 1162 1470 -107 1716 195 30 22 chr18 48004288 48004658 -37984276 - MLT1A2 LTR MaLR 0 374 2 234 196 0 71 chr18 48004717 48004773 -37984161 - L2 LINE L2 0 3272 3221 345 377 33 59 chr18 48005106 48005443 -37983491 - L2 LINE L2 -5 3267 2940 1753 150 4 4 chr18 48005541 48005821 -37983113 + AluJb SINE Alu 21 300 -12 180 0 0 0 chr18 48005940 48005960 -37982974 + (A)n Simple_repeat Simple_repeat 1 20 0 2056 231 38 10 chr18 48006006 48006512 -37982422 - MER69 DNA AcHobo -1933 593 74 215 243 40 40 chr18 48006705 48006779 -37982155 + MIR3 SINE MIR 1 74 -134 1622 190 17 0 chr18 48007079 48007374 -37981560 - AluJo SINE Alu -12 300 1 347 264 14 0 chr18 48007824 48007896 -37981038 - L2 LINE L2 0 3272 3200 1243 201 33 30 chr18 48008248 48008551 -37980383 + AluJo SINE Alu 2 305 -7 225 234 65 13 chr18 48009194 48009271 -37979663 - MLT1K LTR MaLR -315 273 193 255 79 0 0 chr18 48009390 48009428 -37979506 + (T)n Simple_repeat Simple_repeat 1 38 0 421 294 14 7 chr18 48010039 48010185 -37978749 - MER5A DNA MER1_type 0 189 43 194 263 18 0 chr18 48010821 48010878 -37978056 - MIR SINE MIR -63 145 88 230 267 13 53 chr18 48012627 48012702 -37976232 - MIR SINE MIR -91 117 46 351 238 30 0 chr18 48013212 48013313 -37975621 - L1MA10 LINE L1 -4 6330 6227 682 172 64 19 chr18 48013477 48013634 -37975300 - MER53 DNA DNA 0 189 26 1552 163 53 3 chr18 48013641 48013924 -37975010 - AluJb SINE Alu -15 297 1 725 286 75 124 chr18 48014044 48014719 -37974215 - L3 LINE CR1 -549 1028 416 2070 124 7 0 chr18 48014719 48015025 -37973909 + AluSx SINE Alu 1 308 -4 725 286 75 124 chr18 48015025 48015349 -37973585 - L3 LINE CR1 -1161 416 78 1900 123 3 0 chr18 48015594 48015878 -37973056 + AluSx SINE Alu 1 285 -27 351 44 0 0 chr18 48015878 48015923 -37973011 + (CA)n Simple_repeat Simple_repeat 2 46 0 501 250 23 70 chr18 48015951 48016123 -37972811 - MIR SINE MIR -86 176 13 228 313 23 0 chr18 48017152 48017283 -37971651 + (CA)n Simple_repeat Simple_repeat 2 135 0 270 255 128 34 chr18 48017621 48017770 -37971164 - MIR3 SINE MIR -24 184 22 240 100 0 0 chr18 48018664 48018704 -37970230 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 188 269 0 0 chr18 48019070 48019122 -37969812 - L2 LINE L2 -254 3059 3008 314 330 0 0 chr18 48019621 48019727 -37969207 - LTR65 LTR ERV1 -9 660 555 720 218 46 11 chr18 48020095 48020269 -37968665 + MIR SINE MIR 83 262 0 240 368 6 42 chr18 48020711 48020877 -37968057 + MIR3 SINE MIR 8 167 -41 479 265 231 24 chr18 48020881 48021179 -37967755 - L1MC4a LINE L1 -1917 5891 5532 191 262 49 0 chr18 48022029 48022090 -37966844 - L2 LINE L2 -2 3270 3207 271 191 15 29 chr18 48022622 48022690 -37966244 - L2 LINE L2 0 3272 3206 2392 29 44 0 chr18 48023668 48023970 -37964964 - AluY SINE Alu 0 314 1 2856 264 109 63 chr18 48024530 48025425 -37963509 + HAL1 LINE L1 2 855 -1652 2505 45 0 0 chr18 48025425 48025739 -37963195 + L1PA7 LINE L1 5828 6141 -13 2856 264 109 63 chr18 48025739 48026665 -37962269 + HAL1 LINE L1 855 1906 -601 634 188 0 69 chr18 48026735 48026879 -37962055 + FLAM_C SINE Alu 7 140 -3 541 285 23 47 chr18 48026895 48027109 -37961825 + HAL1 LINE L1 1951 2159 -348 1322 194 19 9 chr18 48027757 48028077 -37960857 - MER33 DNA MER1_type 0 324 2 2498 85 0 0 chr18 48028209 48028516 -37960418 - AluSc SINE Alu -2 307 1 1818 182 22 3 chr18 48030494 48030851 -37958083 + MLT1A1 LTR MaLR 1 364 -1 287 255 14 71 chr18 48032936 48033077 -37955857 - MIR3 SINE MIR -67 141 9 332 300 91 9 chr18 48033604 48033814 -37955120 + L3 LINE CR1 1065 1291 -286 204 387 54 0 chr18 48033859 48033970 -37954964 + L3 LINE CR1 1434 1550 -27 350 301 21 0 chr18 48035209 48035302 -37953632 + L2 LINE L2 3153 3247 -25 279 0 0 0 chr18 48035303 48035334 -37953600 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 2402 106 0 0 chr18 48035835 48036137 -37952797 - AluSq SINE Alu -11 302 1 227 277 31 0 chr18 48037241 48037306 -37951628 + MIR SINE MIR 86 152 -56 470 268 16 8 chr18 48038026 48038149 -37950785 - L2 LINE L2 0 3313 3190 812 180 42 74 chr18 48038178 48038365 -37950569 + MER33 DNA MER1_type 51 242 -2343 1586 182 28 28 chr18 48038365 48038656 -37950278 - AluJo SINE Alu -21 291 1 812 180 42 74 chr18 48038656 48038721 -37950213 + MER33 DNA MER1_type 242 296 -2289 2388 69 14 3 chr18 48038721 48039010 -37949924 - AluSx SINE Alu -20 292 1 812 180 42 74 chr18 48039010 48039039 -37949895 + MER33 DNA MER1_type 296 324 0 871 283 175 12 chr18 48039046 48039697 -37949237 - L2 LINE L2 -132 3181 2422 1904 210 146 2 chr18 48039697 48040177 -37948757 + MLT1H LTR MaLR 1 549 0 311 198 70 70 chr18 48040926 48041098 -37947836 - MIR SINE MIR -63 145 12 2252 117 0 19 chr18 48041173 48041489 -37947445 - AluY SINE Alu -1 310 1 188 200 18 0 chr18 48042023 48042078 -37946856 + (TG)n Simple_repeat Simple_repeat 1 56 0 255 322 11 6 chr18 48042098 48042285 -37946649 + (TG)n Simple_repeat Simple_repeat 1 188 0 492 270 31 44 chr18 48042488 48042647 -37946287 + MIR SINE MIR 36 192 -70 210 238 0 119 chr18 48043146 48043230 -37945704 - MIR SINE MIR -116 146 73 188 241 93 0 chr18 48043833 48043887 -37945047 + MIR SINE MIR 86 144 -64 253 286 114 29 chr18 48044711 48044816 -37944118 - MIR3 SINE MIR -27 181 68 319 252 166 29 chr18 48045568 48045707 -37943227 + MIR SINE MIR 28 185 -77 705 172 8 0 chr18 48047056 48047184 -37941750 - MER20 DNA MER1_type -2 217 89 351 326 124 17 chr18 48047208 48047386 -37941548 - MIR SINE MIR -55 207 11 1432 227 108 38 chr18 48047595 48048048 -37940886 - MLT1H LTR MaLR -52 497 13 322 271 108 23 chr18 48048179 48048308 -37940626 + L2 LINE L2 3132 3271 -1 193 221 29 7 chr18 48049142 48049278 -37939656 + (TG)n Simple_repeat Simple_repeat 1 139 0 261 225 24 12 chr18 48049342 48049511 -37939423 + (TG)n Simple_repeat Simple_repeat 1 171 0 2084 146 0 13 chr18 48049695 48050035 -37938899 - AluSx SINE Alu 0 336 1 1851 137 0 4 chr18 48051286 48051556 -37937378 - AluSg SINE Alu -7 303 35 2584 70 3 0 chr18 48051797 48052109 -37936825 + AluSp SINE Alu 1 313 0 226 343 20 50 chr18 48052286 48052487 -37936447 - L3 LINE CR1 -2 1575 1381 2445 86 0 7 chr18 48052670 48052974 -37935960 - AluSq SINE Alu -9 304 3 2097 173 31 23 chr18 48053085 48053547 -37935387 + MER69 DNA AcHobo 1984 2452 -74 2475 87 0 3 chr18 48053547 48053857 -37935077 - AluSp SINE Alu -4 309 1 2097 173 31 23 chr18 48053857 48053875 -37935059 + MER69 DNA AcHobo 2452 2468 -58 216 352 47 16 chr18 48054508 48054636 -37934298 - MER5A DNA MER1_type -23 166 35 194 301 65 72 chr18 48054509 48054662 -37934272 + MER5B DNA MER1_type 25 176 -2 * 323 305 99 0 chr18 48054769 48054900 -37934034 + MIR SINE MIR 23 166 -96 213 94 0 0 chr18 48056770 48056802 -37932132 + (GA)n Simple_repeat Simple_repeat 2 33 0 22 35 0 0 chr18 48056877 48056906 -37932028 + AT_rich Low_complexity Low_complexity 1 29 0 1730 165 13 20 chr18 48056961 48057264 -37931670 - AluJo SINE Alu -11 301 1 486 0 0 0 chr18 48057291 48057345 -37931589 + (TG)n Simple_repeat Simple_repeat 2 55 0 327 25 0 0 chr18 48058090 48058130 -37930804 + (TG)n Simple_repeat Simple_repeat 1 40 0 1620 130 13 17 chr18 48058475 48058774 -37930160 - L1MA8 LINE L1 -11 6280 5983 435 279 46 41 chr18 48058842 48059039 -37929895 + MLT1J2 LTR MaLR 252 449 -1 195 129 0 0 chr18 48059123 48059154 -37929780 + (TCCA)n Simple_repeat Simple_repeat 2 32 0 219 321 225 21 chr18 48059944 48060131 -37928803 + L2 LINE L2 3026 3250 -22 3004 263 71 17 chr18 48060152 48061130 -37927804 + L1MC4a LINE L1 5258 6302 -1506 2030 139 0 17 chr18 48061130 48061470 -37927464 - AluJb SINE Alu 0 312 1 3004 263 71 17 chr18 48061470 48061573 -37927361 + L1MC4a LINE L1 6302 6398 -1410 464 204 6 77 chr18 48061556 48061737 -37927197 + L1MC4 LINE L1 7676 7843 -199 * 552 281 89 25 chr18 48061786 48062021 -37926913 - MIR SINE MIR 0 262 13 351 0 0 0 chr18 48062037 48062076 -37926858 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 358 176 11 11 chr18 48063396 48063487 -37925447 + (CATCC)n Simple_repeat Simple_repeat 4 94 0 1472 267 77 30 chr18 48063596 48064139 -37924795 + MER90 LTR ERV1 1 569 -6 253 312 28 28 chr18 48064195 48064304 -37924630 + MIR SINE MIR 38 146 -62 321 271 10 10 chr18 48064418 48064514 -37924420 + MER94 DNA DNA 37 132 -2 1290 218 64 44 chr18 48064578 48065032 -37923902 + MLT1C LTR MaLR 1 463 -4 2108 157 13 0 chr18 48065490 48065796 -37923138 - AluSx SINE Alu -2 310 1 302 233 75 53 chr18 48066441 48066574 -37922360 - L1MC3 LINE L1 -1632 6153 6018 853 132 0 0 chr18 48066578 48066699 -37922235 - AluSg/x SINE Alu -10 300 180 4758 221 91 32 chr18 48066710 48067026 -37921908 - L1M4 LINE L1 -1505 4641 4345 180 0 0 0 chr18 48067026 48067046 -37921888 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1496 172 0 86 chr18 48067051 48067354 -37921580 - AluJo SINE Alu -35 277 1 4758 221 91 32 chr18 48067354 48067668 -37921266 - L1M4 LINE L1 -1804 4342 4048 2241 100 6 10 chr18 48067668 48067979 -37920955 - AluSg SINE Alu 0 310 1 4758 221 91 32 chr18 48067979 48068666 -37920268 - L1M4 LINE L1 -2098 4048 3205 261 0 0 0 chr18 48068666 48068695 -37920239 + (TC)n Simple_repeat Simple_repeat 2 30 0 4758 221 91 32 chr18 48068695 48068965 -37919969 - L1M4 LINE L1 -2941 3205 2952 881 238 105 54 chr18 48069162 48069599 -37919335 + MLT1J LTR MaLR 17 575 -40 216 341 45 0 chr18 48069832 48069920 -37919014 + MIR3 SINE MIR 69 160 -48 233 259 0 19 chr18 48069920 48069974 -37918960 + Charlie4 DNA MER1_type 1 53 -1908 295 307 62 33 chr18 48070271 48070375 -37918559 - L1ME4a LINE L1 -66 6055 5955 1779 122 9 83 chr18 48070375 48070712 -37918222 - AluSx SINE Alu 0 312 1 295 307 62 33 chr18 48070712 48070848 -37918086 - L1ME4a LINE L1 -166 5955 5808 251 298 48 12 chr18 48071475 48071559 -37917375 - MIR SINE MIR -81 181 95 248 75 0 25 chr18 48072935 48072975 -37915959 + (GGA)n Simple_repeat Simple_repeat 1 39 0 488 329 38 9 chr18 48073473 48073686 -37915248 + MIR SINE MIR 31 249 -13 243 224 32 88 chr18 48073708 48073833 -37915101 + MLT1I LTR MaLR 101 218 -191 190 313 175 31 chr18 48074010 48074170 -37914764 + L3 LINE CR1 1312 1494 -83 845 219 18 36 chr18 48075283 48075507 -37913427 + LTR16C LTR ERVL 125 344 -147 1169 271 84 33 chr18 48075509 48076032 -37912902 - MLT1H LTR MaLR -2 590 1 566 176 47 40 chr18 48076033 48076181 -37912753 + LTR16C LTR ERVL 341 489 -2 403 333 15 10 chr18 48076296 48076491 -37912443 - LTR67 LTR ERVL -325 232 37 2548 192 25 29 chr18 48076858 48077414 -37911520 + MLT2B3 LTR ERVL 1 554 0 1669 269 65 47 chr18 48077931 48077972 -37910962 - HAL1 LINE L1 -10 2497 2458 1140 153 222 12 chr18 48077972 48078220 -37910714 + AluJb SINE Alu 3 302 0 1669 269 65 47 chr18 48078220 48078962 -37909972 - HAL1 LINE L1 -49 2458 1700 1131 286 43 11 chr18 48079113 48079487 -37909447 - HAL1 LINE L1 -780 1727 1342 1674 235 103 53 chr18 48080089 48080786 -37908148 - HAL1 LINE L1 -1179 1328 597 884 283 21 53 chr18 48080885 48081316 -37907618 + MLT1L LTR MaLR 197 613 -2 307 164 66 0 chr18 48081403 48081464 -37907470 - L2 LINE L2 0 3313 3249 438 305 79 6 chr18 48081556 48081733 -37907201 - MIR SINE MIR -10 252 63 191 205 121 24 chr18 48081915 48081998 -37906936 - L2 LINE L2 -18 3254 3164 2500 179 40 30 chr18 48082193 48082796 -37906138 + L1MB4 LINE L1 5570 6178 -2 435 218 9 142 chr18 48084362 48084504 -37904430 + MER5A DNA MER1_type 4 111 -78 2029 131 7 16 chr18 48084504 48084809 -37904125 - AluJo SINE Alu -4 308 7 435 218 9 142 chr18 48084809 48084877 -37904057 + MER5A DNA MER1_type 111 186 -3 2556 72 3 0 chr18 48084924 48085228 -37903706 - AluSp SINE Alu -8 305 1 1298 303 36 21 chr18 48085619 48086094 -37902840 - MLT1J LTR MaLR -29 482 1 1764 172 0 57 chr18 48086421 48086752 -37902182 + AluJb SINE Alu 1 312 0 2425 55 0 26 chr18 48087371 48087680 -37901254 - AluY SINE Alu -10 301 1 293 281 37 0 chr18 48087727 48087809 -37901125 - MLT1J LTR MaLR -4 507 423 2284 125 0 3 chr18 48088198 48088509 -37900425 - AluSx SINE Alu -2 310 1 747 202 86 74 chr18 48088518 48088728 -37900206 - L1MC5 LINE L1 -32 7929 7712 1094 231 86 25 chr18 48088728 48089052 -37899882 + MER2 DNA MER2_type 1 344 0 747 202 86 74 chr18 48089052 48089177 -37899757 - L1MC5 LINE L1 -249 7712 7590 1155 154 154 9 chr18 48089177 48089398 -37899536 - AluJb SINE Alu -59 253 1 1519 233 68 36 chr18 48089404 48089962 -37898972 - L1MC5 LINE L1 -368 7593 7018 259 189 14 14 chr18 48090434 48090508 -37898426 + CT-rich Low_complexity Low_complexity 1 74 0 2307 104 0 7 chr18 48090514 48090823 -37898111 - AluSx SINE Alu -5 307 1 359 324 108 11 chr18 48091823 48091999 -37896935 + MIR3 SINE MIR 16 208 0 195 100 0 0 chr18 48092004 48092034 -37896900 + (T)n Simple_repeat Simple_repeat 1 30 0 315 259 17 78 chr18 48092052 48092168 -37896766 - MIR SINE MIR -70 192 84 733 279 56 9 chr18 48092496 48092711 -37896223 - MIR SINE MIR -17 245 21 431 333 59 34 chr18 48092785 48093229 -37895705 + L1ME4a LINE L1 5476 5930 -191 310 167 42 35 chr18 48095297 48095441 -37893493 + (CCG)n Simple_repeat Simple_repeat 3 147 0 36 0 0 0 chr18 48095567 48095603 -37893331 + GC_rich Low_complexity Low_complexity 1 36 0 405 0 0 0 chr18 48095853 48095898 -37893036 + (TG)n Simple_repeat Simple_repeat 1 45 0 327 113 0 0 chr18 48096227 48096280 -37892654 + (TG)n Simple_repeat Simple_repeat 1 53 0 199 79 53 0 chr18 48098404 48098442 -37890492 + A-rich Low_complexity Low_complexity 1 40 0 319 299 87 24 chr18 48101618 48101745 -37887189 - L2 LINE L2 -1 3312 3178 263 285 95 19 chr18 48103298 48103456 -37885478 - MIR SINE MIR -46 216 47 385 353 0 22 chr18 48104138 48104277 -37884657 - L1ME4a LINE L1 -199 5922 5787 251 301 108 11 chr18 48104534 48104627 -37884307 + MIR SINE MIR 44 145 -63 214 270 72 27 chr18 48104778 48104889 -37884045 + MIR3 SINE MIR 45 160 -48 763 168 0 26 chr18 48107511 48107666 -37881268 - L1MB4 LINE L1 -1 6179 6029 299 256 124 51 chr18 48107801 48107938 -37880996 + MIR SINE MIR 64 210 -52 184 286 0 65 chr18 48108846 48108923 -37880011 + MIR SINE MIR 181 252 -10 304 241 46 11 chr18 48109024 48109111 -37879823 + MIR SINE MIR 113 202 -60 248 305 12 12 chr18 48109117 48109199 -37879735 - L2 LINE L2 -1 3271 3190 242 204 0 0 chr18 48109233 48109282 -37879652 - MIR SINE MIR -21 241 193 532 224 43 19 chr18 48109969 48110130 -37878804 - MER103 DNA DNA -1 165 1 392 0 0 20 chr18 48110145 48110194 -37878740 + (TG)n Simple_repeat Simple_repeat 1 48 0 1648 219 25 11 chr18 48110417 48110777 -37878157 - MLT1A1 LTR MaLR 0 365 1 263 263 150 0 chr18 48112463 48112543 -37876391 - MER5A DNA MER1_type -25 164 73 283 306 126 24 chr18 48113524 48113730 -37875204 - L3 LINE CR1 -524 1053 827 889 233 119 52 chr18 48113813 48114157 -37874777 - MLT1J LTR MaLR -144 367 1 440 279 27 20 chr18 48114524 48114671 -37874263 + MIR SINE MIR 79 226 -36 287 242 110 11 chr18 48114710 48114801 -37874133 + MIR SINE MIR 157 256 -6 235 174 43 0 chr18 48115222 48115268 -37873666 - MIR3 SINE MIR -27 181 134 481 258 49 31 chr18 48115925 48116088 -37872846 + MER104 DNA Tc2 14 179 -1 2047 126 0 17 chr18 48116251 48116544 -37872390 - AluSx SINE Alu -24 288 1 276 100 0 0 chr18 48117183 48117223 -37871711 + (ATG)n Simple_repeat Simple_repeat 1 40 0 694 287 46 58 chr18 48117477 48117822 -37871112 - L2 LINE L2 0 3313 2973 214 263 18 0 chr18 48118299 48118356 -37870578 + MER5B DNA MER1_type 25 82 -96 337 269 38 65 chr18 48118570 48118756 -37870178 - L2 LINE L2 -27 3286 3106 1501 216 88 30 chr18 48119049 48119480 -37869454 - MLT1C LTR MaLR -10 457 2 234 265 24 12 chr18 48120121 48120204 -37868730 + L2 LINE L2 3187 3270 -2 329 283 71 13 chr18 48120295 48120439 -37868495 + MIR SINE MIR 34 181 -60 350 276 138 10 chr18 48120694 48120897 -37868037 - L2 LINE L2 -257 3056 2828 1325 241 106 27 chr18 48120957 48121364 -37867570 - MLT1J LTR MaLR -72 439 1 362 339 29 23 chr18 48123074 48123245 -37865689 + MIR3 SINE MIR 35 206 -2 276 373 20 0 chr18 48124140 48124242 -37864692 - MIR3 SINE MIR -1 207 104 529 237 23 15 chr18 48124361 48124492 -37864442 + L2 LINE L2 3182 3313 0 1913 155 0 13 chr18 48125284 48125600 -37863334 - AluSx SINE Alu 0 312 1 1713 137 0 7 chr18 48126861 48127132 -37861802 - AluSg SINE Alu -7 303 35 2201 89 0 13 chr18 48127375 48127689 -37861245 + AluSp SINE Alu 1 310 -3 201 188 14 58 chr18 48128067 48128136 -37860798 + L2 LINE L2 3018 3083 -189 329 315 0 11 chr18 48128156 48128245 -37860689 - L2 LINE L2 0 3313 3226 183 367 0 0 chr18 48128645 48128705 -37860229 + MIR3 SINE MIR 148 207 -1 198 245 19 0 chr18 48129039 48129092 -37859842 + MIR SINE MIR 84 137 -125 356 349 30 12 chr18 48129156 48129325 -37859609 - MER5B DNA MER1_type -3 175 4 418 286 143 18 chr18 48129333 48129501 -37859433 + MER5A DNA MER1_type 1 189 0 972 241 52 12 chr18 48130087 48130336 -37858598 + MIR SINE MIR 3 261 -1 255 351 130 11 chr18 48130321 48130506 -37858428 - MIR SINE MIR -10 252 46 * 282 116 0 0 chr18 48131322 48131365 -37857569 + (CA)n Simple_repeat Simple_repeat 1 43 0 500 274 94 37 chr18 48131555 48131800 -37857134 - MIR SINE MIR 0 262 4 2410 129 22 3 chr18 48132314 48132671 -37856263 - THE1B LTR MaLR 0 364 1 255 273 34 11 chr18 48133123 48133211 -37855723 - MIR SINE MIR -116 146 57 217 307 59 20 chr18 48133646 48133747 -37855187 + MIR SINE MIR 20 124 -84 219 188 0 0 chr18 48134405 48134453 -37854481 + (TG)n Simple_repeat Simple_repeat 1 48 0 281 289 17 61 chr18 48135151 48135282 -37853652 - MIR SINE MIR -66 142 30 1815 206 14 8 chr18 48135652 48136012 -37852922 - L1MB3 LINE L1 -3 6180 5819 1913 137 0 7 chr18 48136693 48137022 -37851912 + AluSx SINE Alu 1 327 0 246 235 106 24 chr18 48137281 48137366 -37851568 - L2 LINE L2 -39 3233 3142 267 278 56 9 chr18 48137703 48137811 -37851123 - MIR SINE MIR -85 177 65 2191 92 7 7 chr18 48138087 48138393 -37850541 - AluSc SINE Alu -3 306 1 239 283 17 0 chr18 48138734 48138794 -37850140 - L2 LINE L2 -1 3312 3252 207 247 140 11 chr18 48139728 48139821 -37849113 - MIR SINE MIR -63 145 41 353 164 33 0 chr18 48140895 48140956 -37847978 - MIR SINE MIR -119 143 81 196 319 75 0 chr18 48141589 48141683 -37847251 + MIR3 SINE MIR 104 204 -4 228 250 0 0 chr18 48141927 48141979 -37846955 - MIR SINE MIR -21 241 190 228 225 56 0 chr18 48142497 48142553 -37846381 + MIR SINE MIR 90 149 -113 1641 166 7 10 chr18 48143001 48143297 -37845637 + AluJo SINE Alu 1 295 -17 633 245 57 49 chr18 48144734 48144999 -37843935 - LTR37B LTR ERV1 -5 463 197 2270 78 10 7 chr18 48145016 48145322 -37843612 - AluY SINE Alu 0 311 5 422 252 9 9 chr18 48145428 48145535 -37843399 - LTR37B LTR ERV1 -361 107 1 209 292 0 0 chr18 48146166 48146214 -37842720 - MER91 DNA MER1_type -2 188 141 839 125 0 16 chr18 48146221 48146342 -37842592 + FLAM_C SINE Alu 1 121 -191 211 51 0 51 chr18 48146342 48146381 -37842553 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 183 184 0 0 chr18 48146867 48146905 -37842029 + (TG)n Simple_repeat Simple_repeat 1 38 0 411 106 0 0 chr18 48148044 48148110 -37840824 + (TCCA)n Simple_repeat Simple_repeat 2 67 0 213 290 84 19 chr18 48148112 48148219 -37840715 - L2 LINE L2 -14 3299 3186 368 280 83 42 chr18 48148702 48148870 -37840064 - MER5A DNA MER1_type -5 184 10 268 337 20 40 chr18 48149356 48149555 -37839379 - MER117 DNA MER1_type 0 197 3 286 363 0 0 chr18 48149556 48149658 -37839276 - MIR3 SINE MIR -47 161 60 257 250 21 154 chr18 48149713 48149833 -37839101 - MER103 DNA DNA -2 164 76 207 0 0 0 chr18 48149833 48149856 -37839078 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 257 250 21 154 chr18 48149856 48149923 -37839011 - MER103 DNA DNA -90 76 2 221 287 64 43 chr18 48150945 48151039 -37837895 - MIR3 SINE MIR -47 161 66 1742 159 3 3 chr18 48151245 48151534 -37837400 - AluJb SINE Alu -10 302 14 363 309 150 34 chr18 48152259 48152466 -37836468 + MIR SINE MIR 29 259 -3 212 375 52 0 chr18 48152780 48152916 -37836018 + MIR SINE MIR 46 188 -74 200 219 16 0 chr18 48153280 48153344 -37835590 + A-rich Low_complexity Low_complexity 1 65 0 * 425 167 64 21 chr18 48153321 48153719 -37835215 + (CA)n Simple_repeat Simple_repeat 1 415 0 213 301 86 0 chr18 48204941 48205034 -37783900 + MIR3 SINE MIR 104 204 -4 228 250 0 0 chr18 48205277 48205329 -37783605 - MIR SINE MIR -21 241 190 228 225 56 0 chr18 48205845 48205901 -37783033 + MIR SINE MIR 90 149 -113 1707 167 7 3 chr18 48206345 48206639 -37782295 + AluJo SINE Alu 1 295 -17 908 252 52 95 chr18 48208057 48208338 -37780596 - LTR37B LTR ERV1 -5 463 210 2375 78 10 0 chr18 48208338 48208646 -37780288 - AluY SINE Alu 0 311 1 908 252 52 95 chr18 48208646 48208848 -37780086 - LTR37B LTR ERV1 -258 210 1 209 292 0 0 chr18 48209475 48209523 -37779411 - MER91 DNA MER1_type -2 188 141 864 126 0 8 chr18 48209530 48209650 -37779284 + FLAM_C SINE Alu 1 121 -191 211 51 0 51 chr18 48209650 48209689 -37779245 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 183 184 0 0 chr18 48210172 48210210 -37778724 + (TG)n Simple_repeat Simple_repeat 1 38 0 462 108 0 0 chr18 48211337 48211411 -37777523 + (TCCA)n Simple_repeat Simple_repeat 2 75 0 213 290 84 19 chr18 48211413 48211520 -37777414 - L2 LINE L2 -14 3299 3186 368 280 83 42 chr18 48212001 48212169 -37776765 - MER5A DNA MER1_type -5 184 10 268 330 25 35 chr18 48212650 48212847 -37776087 - MER117 DNA MER1_type 0 197 3 286 363 0 0 chr18 48212848 48212950 -37775984 - MIR3 SINE MIR -47 161 60 270 243 21 153 chr18 48213001 48213122 -37775812 - MER103 DNA DNA -1 165 76 207 0 0 0 chr18 48213122 48213145 -37775789 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 270 243 21 153 chr18 48213145 48213212 -37775722 - MER103 DNA DNA -90 76 2 239 286 61 41 chr18 48214226 48214324 -37774610 - MIR3 SINE MIR -43 165 66 1805 158 3 0 chr18 48214530 48214821 -37774113 - AluJb SINE Alu -10 302 11 370 311 151 29 chr18 48215533 48215739 -37773195 + MIR SINE MIR 29 259 -3 212 375 52 0 chr18 48216053 48216189 -37772745 + MIR SINE MIR 46 188 -74 425 162 59 21 chr18 48216552 48216991 -37771943 + (CA)n Simple_repeat Simple_repeat 1 455 0 266 286 114 29 chr18 48217771 48217876 -37771058 - MIR3 SINE MIR -27 181 68 332 252 166 29 chr18 48218628 48218767 -37770167 + MIR SINE MIR 28 185 -77 714 172 8 0 chr18 48220116 48220244 -37768690 - MER20 DNA MER1_type -2 217 89 361 326 124 17 chr18 48220268 48220446 -37768488 - MIR SINE MIR -55 207 11 1432 227 108 38 chr18 48220655 48221108 -37767826 - MLT1H LTR MaLR -52 497 13 322 271 108 23 chr18 48221239 48221368 -37767566 + L2 LINE L2 3132 3271 -1 217 173 27 18 chr18 48222202 48222312 -37766622 + (TG)n Simple_repeat Simple_repeat 1 111 0 199 200 11 11 chr18 48222357 48222452 -37766482 + (TG)n Simple_repeat Simple_repeat 1 95 0 338 180 31 12 chr18 48222472 48222633 -37766301 + (TG)n Simple_repeat Simple_repeat 1 164 0 182 118 29 0 chr18 48222652 48222686 -37766248 + (TG)n Simple_repeat Simple_repeat 1 35 0 249 225 24 12 chr18 48222750 48222919 -37766015 + (TG)n Simple_repeat Simple_repeat 1 171 0 255 230 22 0 chr18 48222962 48223101 -37765833 + (TG)n Simple_repeat Simple_repeat 2 143 0 409 294 14 7 chr18 48223720 48223866 -37765068 - MER5A DNA MER1_type 0 189 43 190 263 18 0 chr18 48224502 48224559 -37764375 - MIR SINE MIR -63 145 88 220 267 13 53 chr18 48226309 48226384 -37762550 - MIR SINE MIR -91 117 46 336 238 30 0 chr18 48226894 48226995 -37761939 - L1MA10 LINE L1 -4 6330 6227 647 172 48 0 chr18 48227171 48227316 -37761618 + MER53 DNA DNA 23 174 -15 1700 163 53 3 chr18 48227323 48227606 -37761328 - AluJb SINE Alu -15 297 1 591 300 69 119 chr18 48227726 48228401 -37760533 - L3 LINE CR1 -549 1028 417 2119 120 7 0 chr18 48228401 48228708 -37760226 + AluSx SINE Alu 1 309 0 591 300 69 119 chr18 48228708 48229032 -37759902 - L3 LINE CR1 -1160 417 78 2052 123 3 0 chr18 48229277 48229561 -37759373 + AluSx SINE Alu 1 285 -27 351 44 0 0 chr18 48229561 48229606 -37759328 + (CA)n Simple_repeat Simple_repeat 2 46 0 477 244 23 70 chr18 48229634 48229806 -37759128 - MIR SINE MIR -86 176 13 1001 53 0 0 chr18 48230923 48231036 -37757898 - AluSp SINE Alu -200 113 1 201 162 0 0 chr18 48231166 48231203 -37757731 + T-rich Low_complexity Low_complexity 1 37 0 440 331 41 0 chr18 48231252 48231424 -37757510 + MIR3 SINE MIR 24 202 -6 2207 96 0 30 chr18 48231709 48232012 -37756922 + AluSx SINE Alu 1 294 -18 425 296 62 6 chr18 48232057 48232219 -37756715 - L2 LINE L2 -183 3089 2919 220 309 16 8 chr18 48232546 48232669 -37756265 + (CA)n Simple_repeat Simple_repeat 2 125 0 279 248 128 34 chr18 48233007 48233156 -37755778 - MIR3 SINE MIR -24 184 22 240 100 0 0 chr18 48234050 48234090 -37754844 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 188 269 0 0 chr18 48234456 48234508 -37754426 - L2 LINE L2 -254 3059 3008 314 330 0 0 chr18 48235007 48235113 -37753821 - LTR65 LTR ERV1 -9 660 555 720 218 46 11 chr18 48235481 48235655 -37753279 + MIR SINE MIR 83 262 0 221 345 24 48 chr18 48236097 48236265 -37752669 + MIR3 SINE MIR 8 171 -37 470 264 224 20 chr18 48236265 48236564 -37752370 - L1MC4a LINE L1 -1917 5891 5532 191 262 49 0 chr18 48237413 48237474 -37751460 - L2 LINE L2 -2 3270 3207 271 191 15 29 chr18 48238006 48238074 -37750860 - L2 LINE L2 0 3272 3206 188 241 93 0 chr18 48239345 48239399 -37749535 - MIR SINE MIR -64 144 86 210 238 0 119 chr18 48240000 48240084 -37748850 + MIR SINE MIR 73 146 -116 492 270 31 44 chr18 48240583 48240742 -37748192 - MIR SINE MIR -70 192 36 255 322 11 6 chr18 48240945 48241132 -37747802 + (CA)n Simple_repeat Simple_repeat 1 188 0 188 200 18 0 chr18 48241152 48241207 -37747727 + (CA)n Simple_repeat Simple_repeat 1 56 0 2252 117 0 19 chr18 48241741 48242057 -37746877 + AluY SINE Alu 1 310 -1 311 198 70 70 chr18 48242132 48242304 -37746630 + MIR SINE MIR 12 189 -63 1904 210 146 2 chr18 48243053 48243533 -37745401 - MLT1H LTR MaLR 0 549 1 856 283 174 17 chr18 48243533 48244187 -37744747 + L2 LINE L2 2422 3181 -132 826 177 43 71 chr18 48244194 48244223 -37744711 - MER33 DNA MER1_type -2261 324 296 2397 69 14 3 chr18 48244223 48244513 -37744421 + AluSx SINE Alu 1 293 -19 826 177 43 71 chr18 48244513 48244577 -37744357 - MER33 DNA MER1_type -2289 296 232 1586 182 28 28 chr18 48244577 48244868 -37744066 + AluJo SINE Alu 1 291 -21 826 177 43 71 chr18 48244868 48245055 -37743879 - MER33 DNA MER1_type -2353 232 51 470 268 16 8 chr18 48245084 48245207 -37743727 + L2 LINE L2 3190 3313 0 227 277 31 0 chr18 48245927 48245992 -37742942 - MIR SINE MIR -56 152 86 210 341 0 23 chr18 48246332 48246420 -37742514 + CT-rich Low_complexity Low_complexity 4 89 0 2412 106 0 0 chr18 48247065 48247367 -37741567 + AluSq SINE Alu 1 302 -11 279 0 0 0 chr18 48247868 48247899 -37741035 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 350 301 21 0 chr18 48247900 48247993 -37740941 - L2 LINE L2 -25 3247 3153 204 387 54 0 chr18 48249232 48249343 -37739591 - L3 LINE CR1 -27 1550 1434 332 300 91 9 chr18 48249388 48249598 -37739336 - L3 LINE CR1 -286 1291 1065 472 284 52 36 chr18 48250125 48250319 -37738615 + MIR3 SINE MIR 9 205 -3 262 237 13 26 chr18 48250379 48250455 -37738479 + CT-rich Low_complexity Low_complexity 3 77 0 1818 182 22 3 chr18 48252296 48252653 -37736281 - MLT1A1 LTR MaLR -1 364 1 2519 81 0 0 chr18 48254631 48254938 -37733996 + AluSc SINE Alu 1 307 -2 1322 194 19 9 chr18 48255070 48255390 -37733544 + MER33 DNA MER1_type 2 324 0 553 285 23 47 chr18 48256039 48256253 -37732681 - HAL1 LINE L1 -348 2159 1951 634 188 0 69 chr18 48256269 48256413 -37732521 - FLAM_C SINE Alu -3 140 7 2856 264 109 63